Query 003314
Match_columns 831
No_of_seqs 174 out of 261
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 20:59:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003314.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003314hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tgh_A Glideosome-associated p 99.9 4.5E-27 1.5E-31 252.3 15.2 212 380-641 2-257 (342)
2 1xzw_A Purple acid phosphatase 99.9 1.7E-23 5.9E-28 226.5 17.6 217 378-641 123-365 (426)
3 1ute_A Protein (II purple acid 99.9 4.3E-23 1.5E-27 207.8 13.0 213 378-640 3-245 (313)
4 2qfp_A Purple acid phosphatase 99.9 1.8E-22 6.3E-27 218.1 14.8 217 378-641 116-358 (424)
5 2nxf_A Putative dimetal phosph 99.7 5.5E-17 1.9E-21 163.5 12.3 214 379-637 3-286 (322)
6 3d03_A Phosphohydrolase; glyce 99.7 1.2E-15 4.2E-20 151.8 17.3 168 421-638 40-216 (274)
7 3ib7_A ICC protein; metallopho 99.7 3.1E-15 1E-19 153.2 18.9 203 378-639 22-241 (330)
8 2xmo_A LMO2642 protein; phosph 99.6 1.1E-14 3.7E-19 157.4 19.7 164 422-618 92-289 (443)
9 2yeq_A Apased, PHOD, alkaline 99.5 1.3E-13 4.5E-18 155.4 20.0 199 380-619 115-389 (527)
10 1uf3_A Hypothetical protein TT 99.3 1.8E-11 6E-16 118.4 10.6 175 381-612 5-190 (228)
11 2yvt_A Hypothetical protein AQ 99.0 1E-09 3.5E-14 109.1 12.5 118 486-612 91-222 (260)
12 2q8u_A Exonuclease, putative; 99.0 7.3E-10 2.5E-14 116.3 9.8 201 375-618 12-236 (336)
13 3rl5_A Metallophosphoesterase 98.6 4.2E-07 1.4E-11 96.6 15.3 202 377-645 55-283 (296)
14 3av0_A DNA double-strand break 98.4 1.5E-06 5E-11 93.7 13.3 114 486-616 97-212 (386)
15 3tho_B Exonuclease, putative; 98.4 1.3E-06 4.5E-11 94.2 12.2 127 484-617 79-217 (379)
16 1ii7_A MRE11 nuclease; RAD50, 98.3 5.2E-06 1.8E-10 87.3 13.3 121 484-617 76-213 (333)
17 1nnw_A Hypothetical protein; s 98.1 1.1E-06 3.8E-11 87.6 4.0 83 546-638 110-196 (252)
18 1xm7_A Hypothetical protein AQ 98.1 4.1E-06 1.4E-10 81.4 7.2 50 565-617 105-154 (195)
19 1z2w_A Vacuolar protein sortin 97.9 7.6E-05 2.6E-09 72.6 12.9 42 566-615 89-130 (192)
20 3ck2_A Conserved uncharacteriz 97.8 5.5E-05 1.9E-09 72.5 8.3 58 566-638 77-134 (176)
21 1s3l_A Hypothetical protein MJ 97.8 3.4E-05 1.2E-09 75.8 6.7 54 565-639 114-167 (190)
22 2a22_A Vacuolar protein sortin 97.7 4.7E-05 1.6E-09 75.7 7.3 43 565-615 112-154 (215)
23 3qfm_A SAPH, putative uncharac 97.6 9.9E-05 3.4E-09 76.2 7.9 87 544-639 106-195 (270)
24 1hp1_A 5'-nucleotidase; metall 97.6 0.00022 7.7E-09 79.6 10.9 126 487-616 85-233 (516)
25 4fbw_A DNA repair protein RAD3 97.5 0.00075 2.6E-08 74.9 13.6 120 484-617 120-253 (417)
26 4fbk_A DNA repair and telomere 97.5 0.0004 1.4E-08 78.3 11.6 120 484-617 183-316 (472)
27 3t1i_A Double-strand break rep 97.5 0.0013 4.5E-08 73.2 15.4 44 565-617 229-272 (431)
28 3rqz_A Metallophosphoesterase; 97.4 8.6E-05 2.9E-09 74.8 4.3 61 545-613 92-153 (246)
29 2z1a_A 5'-nucleotidase; metal- 97.3 0.0011 3.8E-08 75.0 12.0 114 487-616 109-244 (552)
30 2kkn_A Uncharacterized protein 97.1 0.00047 1.6E-08 67.1 5.4 40 566-615 102-141 (178)
31 2wdc_A SOXB, sulfur oxidation 97.0 0.005 1.7E-07 70.3 13.5 112 487-617 159-293 (562)
32 3qfk_A Uncharacterized protein 96.6 0.023 8E-07 63.8 15.2 127 488-616 104-253 (527)
33 3ive_A Nucleotidase; structura 96.5 0.025 8.7E-07 63.4 14.2 130 484-616 85-239 (509)
34 4h2g_A 5'-nucleotidase; dimer, 95.9 0.015 5.2E-07 65.7 8.5 114 488-615 109-245 (546)
35 3ztv_A NAD nucleotidase, NADN; 94.7 0.35 1.2E-05 55.2 14.9 114 488-615 97-231 (579)
36 3c9f_A 5'-nucleotidase; 2',3'- 94.7 0.27 9.1E-06 56.3 13.8 118 488-614 98-242 (557)
37 3gve_A YFKN protein; alpha-bet 92.3 0.42 1.4E-05 51.3 9.4 46 565-615 208-254 (341)
38 3jyf_A 2',3'-cyclic nucleotide 92.1 0.76 2.6E-05 49.4 11.1 46 565-615 202-247 (339)
39 1su1_A Hypothetical protein YF 89.6 0.17 5.8E-06 50.0 3.0 41 382-436 26-66 (208)
40 1t70_A Phosphatase; crystal, X 88.4 3.7 0.00013 42.8 12.2 113 485-614 58-177 (255)
41 1t71_A Phosphatase, conserved 88.2 6.4 0.00022 41.6 14.0 112 485-614 64-187 (281)
42 1g5b_A Serine/threonine protei 88.1 0.19 6.6E-06 49.4 2.2 47 379-438 10-56 (221)
43 2z06_A Putative uncharacterize 87.8 7.3 0.00025 40.6 13.9 112 485-614 58-174 (252)
44 4h1s_A 5'-nucleotidase; hydrol 83.5 2.6 8.9E-05 47.3 8.6 111 488-615 87-223 (530)
45 2qjc_A Diadenosine tetraphosph 64.0 1.5 5.3E-05 44.8 0.2 42 383-437 20-61 (262)
46 2dfj_A Diadenosinetetraphospha 57.7 3.8 0.00013 42.7 1.8 17 421-437 27-43 (280)
47 2z72_A Protein-tyrosine-phosph 38.8 9.8 0.00033 40.5 1.4 53 380-438 69-121 (342)
48 1wao_1 Serine/threonine protei 38.5 26 0.00088 38.4 4.7 19 600-618 395-413 (477)
49 3v33_A Ribonuclease ZC3H12A; r 37.0 18 0.00062 37.3 2.9 57 161-233 139-195 (223)
50 2ie4_C PP2A-alpha;, serine/thr 26.4 35 0.0012 36.3 3.0 43 382-438 50-92 (309)
51 3h63_A Serine/threonine-protei 25.1 87 0.003 33.5 5.8 78 347-439 26-104 (315)
52 3e0j_A DNA polymerase subunit 24.8 19 0.00066 40.8 0.8 59 379-437 198-259 (476)
53 1fjm_A Protein serine/threonin 23.0 43 0.0015 36.0 3.0 42 383-438 58-99 (330)
54 1f2t_B RAD50 ABC-ATPase; DNA d 20.5 1.2E+02 0.0042 28.4 5.2 31 545-575 93-123 (148)
No 1
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=99.94 E-value=4.5e-27 Score=252.33 Aligned_cols=212 Identities=13% Similarity=0.095 Sum_probs=153.6
Q ss_pred CCeEEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCChhhhhcccccchhhhcCCCCC
Q 003314 380 EDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPW 459 (831)
Q Consensus 380 ~~~wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~ 459 (831)
..+.|.++||+|.|...|..||..|++...+ .++||||++||++|. |.....+.+|.+.|+..+..
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~----------~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~--- 67 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKN----------ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSE--- 67 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHH----------TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCC---
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhh----------cCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhh---
Confidence 5789999999999988999999999875432 368999999999999 65434455555555554321
Q ss_pred CcccccccCCCCCCCCCccc-ccCCCCeEEEeCCCCCCCCChHHHHHHhh----------------ccccCCccccCCCc
Q 003314 460 YKKDHVAVNKPEVPSGVPEL-KQYDGPQCYIIPGNHDWFDGLNTFMRFIC----------------HKSWLGGWFMPQKK 522 (831)
Q Consensus 460 ~~~e~i~~~kpelp~~~~~l-~~~~gP~vfAIPGNHDWyDGL~aFlr~F~----------------~r~~lgGW~mpQ~~ 522 (831)
+ .....| +|+|||||||+++.++++++.. .+....+|.||.+
T Consensus 68 -------------------~~~~~~~P-~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~- 126 (342)
T 3tgh_A 68 -------------------EKGDMYMP-FFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNY- 126 (342)
T ss_dssp -------------------GGGTTCSE-EEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSSS-
T ss_pred -------------------hhhhhCCC-EEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCcc-
Confidence 0 012334 9999999999999999888743 0112467999976
Q ss_pred ceEEEE----cC-------C-----cEEEEEEecCCCCC----------CCHHHHHHHHHHHHhhcCCCCeEEEEecCCC
Q 003314 523 SYFALQ----LP-------K-----GWWVFGLDLALHCD----------IDVYQFKFFAELVKEQVGERDSVIIMTHEPN 576 (831)
Q Consensus 523 SYFAlr----Lp-------~-----~wWLiGLDtql~gd----------ID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~ 576 (831)
||++. ++ . .+.|++|||+.... ....|++||++.|++ .+|+||++|||.
T Consensus 127 -yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~----~~~~IV~~HhP~ 201 (342)
T 3tgh_A 127 -WYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI----ADFIIVVGDQPI 201 (342)
T ss_dssp -SEEEEEEEEEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH----CSEEEEECSSCS
T ss_pred -eEEEEEEeeccccccccccCCCCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc----CCcEEEEECCCC
Confidence 88752 22 1 38999999975431 113799999999953 469999999999
Q ss_pred CCcccccCccchhhHHHHHHhhh-CCceeEEEcCccCCCceeeecCCCCCcccceEEEecCCCCCC
Q 003314 577 WLLDWYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFL 641 (831)
Q Consensus 577 w~~~~~~~~~t~~~l~~Lie~~L-~~RV~LvLAGHiHhYqR~~~~~~~G~~~~~~lIVsGGGGAfL 641 (831)
|..+.+.+. ..++..+++++ +++|+++|+||+|.|+|..+. | .++||+|+||...
T Consensus 202 ~~~~~~~~~---~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~~---g----~~~iv~Ga~g~~~ 257 (342)
T 3tgh_A 202 YSSGYSRGS---SYLAYYLLPLLKDAEVDLYISGHDNNMEVIEDN---D----MAHITCGSGSMSQ 257 (342)
T ss_dssp SCSSTTCCC---HHHHHHTHHHHHHTTCCEEEECSSSSEEEEEET---T----EEEEEECCSSCCC
T ss_pred CCCCCCCCc---HHHHHHHHHHHHHcCCCEEEECCCcceeEEeeC---C----cEEEEeCcccccc
Confidence 998754322 12233334444 569999999999999999764 2 4789999988643
No 2
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=99.90 E-value=1.7e-23 Score=226.55 Aligned_cols=217 Identities=18% Similarity=0.247 Sum_probs=141.9
Q ss_pred CCCCeEEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCChhhhhcccccchhhhcCCC
Q 003314 378 EKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPP 457 (831)
Q Consensus 378 ~~~~~wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~ 457 (831)
+++++.|.+++|+|.+.++..+++.+.++ .+++|+||++||++|.++.......++ +-|...++
T Consensus 123 ~~~~~~f~~~gD~~~~~~~~~~l~~i~~~-------------~~~~D~vl~~GD~~y~~~~~~~~~~~~-~~~~~~l~-- 186 (426)
T 1xzw_A 123 PDVPYVFGLIGDIGQTHDSNTTLTHYEQN-------------SAKGQAVLFMGDLSYSNRWPNHDNNRW-DTWGRFSE-- 186 (426)
T ss_dssp TTCCEEEEEECSCTTBHHHHHHHHHHHHC-------------TTCCSEEEECSCCCCGGGSGGGCTHHH-HHHHHHHH--
T ss_pred CCCCeEEEEEEeCCCCCchHHHHHHHHhC-------------CCCCCEEEeCCChhhcccCCcccchHH-HHHHHHHH--
Confidence 35789999999999775444444443322 135899999999999866421111111 11111111
Q ss_pred CCCcccccccCCCCCCCCCcccccCCCCeEEEeCCCCCCCCChH-----HHHHHhhccccCCccccCC------CcceEE
Q 003314 458 PWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLN-----TFMRFICHKSWLGGWFMPQ------KKSYFA 526 (831)
Q Consensus 458 ~~~~~e~i~~~kpelp~~~~~l~~~~gP~vfAIPGNHDWyDGL~-----aFlr~F~~r~~lgGW~mpQ------~~SYFA 526 (831)
.+.. ..| ++++|||||+..+.. .|..+. ..|.||. ...||+
T Consensus 187 --------------------~l~~-~~P-~~~v~GNHD~~~~~~~~~~~~~~~~~------~~f~~p~~~~~~~~~~~ys 238 (426)
T 1xzw_A 187 --------------------RSVA-YQP-WIWTAGNHEIDYAPDIGEYQPFVPFT------NRYPTPHEASGSGDPLWYA 238 (426)
T ss_dssp --------------------HHHT-TSC-EECCCCGGGCCCBGGGTBCSTTHHHH------HHSCCCCGGGTCSSTTSEE
T ss_pred --------------------HHHh-cCC-EEEeccccccccCCccccccCChhhe------EEEeCCcccCCCCCCCeEE
Confidence 0111 345 999999999976421 222211 1244553 346999
Q ss_pred EEcCCcEEEEEEecCCCCCCCHHHHHHHHHHHHhhc--CCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhh-CCce
Q 003314 527 LQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQV--GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-KGRC 603 (831)
Q Consensus 527 lrLp~~wWLiGLDtql~gdID~~Q~~wFe~ll~~~v--~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L-~~RV 603 (831)
++.+. +.|++||+........+|++||++.|++ . +..+|+||++|+|.|..+..+..+ ...++..+++++ +++|
T Consensus 239 ~~~g~-~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~-~~~~~~~w~Iv~~H~P~~~~~~~~~~~-~~~~r~~l~~ll~~~~V 315 (426)
T 1xzw_A 239 IKRAS-AHIIVLSSYSGFVKYSPQYKWFTSELEK-VNRSETPWLIVLVHAPLYNSYEAHYME-GEAMRAIFEPYFVYYKV 315 (426)
T ss_dssp EEETT-EEEEECCTTSCCSTTSHHHHHHHHHHHH-CCTTTCCEEEEECSSCSSCCBSTTTTT-THHHHHHHHHHHHHTTC
T ss_pred EEECC-EEEEEeeCcccCCCCHHHHHHHHHHHHh-hhhcCCCEEEEEeccCceeCCCcccCC-CHHHHHHHHHHHHHhCC
Confidence 99986 8999999987655678999999999974 3 235689999999999876432222 223445556666 6799
Q ss_pred eEEEcCccCCCceeeecCCC------C------CcccceEEEecCCCCCC
Q 003314 604 KLRIAGDMHHYMRHSYVPSD------G------PVYVQHLLVNGCGGAFL 641 (831)
Q Consensus 604 ~LvLAGHiHhYqR~~~~~~~------G------~~~~~~lIVsGGGGAfL 641 (831)
+++|+||+|.|+|..|..+. | ...++.+||+|+||+..
T Consensus 316 dlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~ 365 (426)
T 1xzw_A 316 DIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSE 365 (426)
T ss_dssp SEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTT
T ss_pred CEEEEcChhhheeeeeecCccccccCCccccccCCCccEEEEeCCCcccc
Confidence 99999999999998764221 1 02356899999999743
No 3
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.89 E-value=4.3e-23 Score=207.77 Aligned_cols=213 Identities=19% Similarity=0.278 Sum_probs=139.4
Q ss_pred CCCCeEEEEEeecCCCCCCc------hHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCChhhhhcccccchh
Q 003314 378 EKEDLWFDFMADTGDGGNSS------YSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFE 451 (831)
Q Consensus 378 ~~~~~wFd~VgDtGDG~dSt------YtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs~e~Y~~Rf~~PYe 451 (831)
+++++.|.+++|++-+.... ..++..+++... .+++|+||++||++|..|.......++.+.++
T Consensus 3 ~~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~----------~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~ 72 (313)
T 1ute_A 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVK----------TLGADFILSLGDNFYFTGVHDAKDKRFQETFE 72 (313)
T ss_dssp CCCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHH----------HHCCSEEEECSCCSTTTCCSSTTCTHHHHHTT
T ss_pred CCCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHH----------hcCCCEEEECCCccCcCCCCCcchHHHHHHHH
Confidence 45789999999999775432 244444443211 23589999999999987654333333433333
Q ss_pred hhcCCCCCCcccccccCCCCCCCCCcccccC-CCCeEEEeCCCCCCCCChHHHHHHhhccccCCccccCCCcceEEEEc-
Q 003314 452 YALQPPPWYKKDHVAVNKPEVPSGVPELKQY-DGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQL- 529 (831)
Q Consensus 452 ~Al~~~~~~~~e~i~~~kpelp~~~~~l~~~-~gP~vfAIPGNHDWyDGL~aFlr~F~~r~~lgGW~mpQ~~SYFAlrL- 529 (831)
..+.. ... ..| +++||||||++.+..+...+... ...|.+|.. ||+...
T Consensus 73 ~~~~~-----------------------~~l~~~p-~~~v~GNHD~~~~~~~~~~~~~~---~~~~~~~~~--~y~~~~~ 123 (313)
T 1ute_A 73 DVFSD-----------------------PSLRNVP-WHVLAGNHDHLGNVSAQIAYSKI---SKRWNFPSP--YYRLRFK 123 (313)
T ss_dssp TTSCS-----------------------GGGTTCC-EEECCCHHHHHSCHHHHHHGGGT---STTEECCSS--SEEEEEE
T ss_pred HHcCc-----------------------hhhcCCC-EEEECCCCccCCCcccccccccc---CCCccCccc--ceEEEEe
Confidence 32210 012 345 99999999998886654443321 235666644 777665
Q ss_pred -C---CcEEEEEEecCC-----------------CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCCcccccCccch
Q 003314 530 -P---KGWWVFGLDLAL-----------------HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSG 588 (831)
Q Consensus 530 -p---~~wWLiGLDtql-----------------~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~ 588 (831)
| .++.+++||+.. .+.+...|++||++.+++ .+++++|+++|+|.+..+.....
T Consensus 124 ~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~--~~~~~~iv~~H~p~~~~~~~~~~--- 198 (313)
T 1ute_A 124 IPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA--AKEDYVLVAGHYPVWSIAEHGPT--- 198 (313)
T ss_dssp CTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHH--CCCSEEEEECSSCSSCCSSSCCC---
T ss_pred cCCCCceEEEEEEEChHHhCcCccccccccCCccccchHHHHHHHHHHHHHh--CCCCeEEEEECCCCccCCCCCCc---
Confidence 4 369999999864 122346899999999974 34579999999999987643221
Q ss_pred hhHHHHHHhhh-CCceeEEEcCccCCCceeeecCCCCCcccceEEEecCCCCC
Q 003314 589 KNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAF 640 (831)
Q Consensus 589 ~~l~~Lie~~L-~~RV~LvLAGHiHhYqR~~~~~~~G~~~~~~lIVsGGGGAf 640 (831)
..+...+.+++ +++|+++|+||+|.+++..... | .++|++|+||..
T Consensus 199 ~~~~~~l~~~l~~~~v~~~l~GH~H~~~~~~~~~--g----~~~i~~gs~~~~ 245 (313)
T 1ute_A 199 HCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDEN--G----LGFVLSGAGNFM 245 (313)
T ss_dssp HHHHHHTHHHHHHTTCSEEEECSSSSEEEEECTT--C----CEEEEECBSSCC
T ss_pred HHHHHHHHHHHHHcCCcEEEECChhhhhhccCCC--C----ceEEEECCCcCc
Confidence 11122223333 4589999999999999887443 2 378999998863
No 4
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=99.88 E-value=1.8e-22 Score=218.08 Aligned_cols=217 Identities=17% Similarity=0.222 Sum_probs=136.6
Q ss_pred CCCCeEEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCChhhhhcccccchhhhcCCC
Q 003314 378 EKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPP 457 (831)
Q Consensus 378 ~~~~~wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~ 457 (831)
+++++.|.+++|+|.+.++..+++.+.++ .+++|+||++||++|.++....-..++ +-|...++
T Consensus 116 ~~~~~~f~~igD~~~~~~~~~~l~~~~~~-------------~~~~D~vl~~GDl~y~~~~~~~~~~~~-~~~~~~l~-- 179 (424)
T 2qfp_A 116 LDVPYTFGLIGDLGQSFDSNTTLSHYELS-------------PKKGQTVLFVGDLSYADRYPNHDNVRW-DTWGRFTE-- 179 (424)
T ss_dssp TTCCEEEEEECSCTTBHHHHHHHHHHHTC-------------SSCCCEEEECSCCSCGGGSGGGCTHHH-HHHHHHHH--
T ss_pred CCCCeEEEEEEeCCCCCChHHHHHHHHhC-------------CCCCCEEEEcCccccccccccccchHH-HHHHHHHH--
Confidence 35789999999999765433223322211 136899999999999865321001011 11111111
Q ss_pred CCCcccccccCCCCCCCCCcccccCCCCeEEEeCCCCCCCCChH-----HHHHHhhccccCCccccCC------CcceEE
Q 003314 458 PWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLN-----TFMRFICHKSWLGGWFMPQ------KKSYFA 526 (831)
Q Consensus 458 ~~~~~e~i~~~kpelp~~~~~l~~~~gP~vfAIPGNHDWyDGL~-----aFlr~F~~r~~lgGW~mpQ------~~SYFA 526 (831)
.+.. ..| +++++||||+..+.. .|..+. ..|.||. ...||+
T Consensus 180 --------------------~~~~-~~P-~~~v~GNHD~~~~~~~~~~~~~~~~~------~~f~~P~~~~~~~~~~~ys 231 (424)
T 2qfp_A 180 --------------------RSVA-YQP-WIWTAGNHEIEFAPEINETEPFKPFS------YRYHVPYEASQSTSPFWYS 231 (424)
T ss_dssp --------------------HHHT-TSC-EEECCCHHHHCCBGGGTBCSTTHHHH------HHCCCCGGGGTCSSTTSEE
T ss_pred --------------------HHHh-cCC-eEeecCCcccccCCcccccccchhhh------hhccCCccccCCCCCcEEE
Confidence 0111 245 999999999874311 122221 1133442 345999
Q ss_pred EEcCCcEEEEEEecCCCCCCCHHHHHHHHHHHHhhcC--CCCeEEEEecCCCCCcccccCccchhhHHHHHHhhh-CCce
Q 003314 527 LQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQVG--ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-KGRC 603 (831)
Q Consensus 527 lrLp~~wWLiGLDtql~gdID~~Q~~wFe~ll~~~v~--~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L-~~RV 603 (831)
++.+ ++.|++||+........+|++||++.|++ .+ ..+|+||++|+|.+..+..+.. .+..++..+++++ +++|
T Consensus 232 ~~~g-~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~-~~~~~~~~~Iv~~H~P~~~~~~~~~~-~~~~~r~~l~~ll~~~~V 308 (424)
T 2qfp_A 232 IKRA-SAHIIVLSSYSAYGRGTPQYTWLKKELRK-VKRSETPWLIVLMHSPLYNSYNHHFM-EGEAMRTKFEAWFVKYKV 308 (424)
T ss_dssp EEET-TEEEEECCTTSCCSTTSHHHHHHHHHHHH-CCTTTCCEEEEECSSCSSCCBSTTTT-TTHHHHHHHHHHHHHTTC
T ss_pred EEEC-CEEEEEecCCccCCCcHHHHHHHHHHHhh-hcccCCCEEEEEeCcCceecCccccc-ccHHHHHHHHHHHHHhCC
Confidence 9998 59999999986544445899999999974 33 2469999999999987543211 1223444445555 5799
Q ss_pred eEEEcCccCCCceeeecCCC------C------CcccceEEEecCCCCCC
Q 003314 604 KLRIAGDMHHYMRHSYVPSD------G------PVYVQHLLVNGCGGAFL 641 (831)
Q Consensus 604 ~LvLAGHiHhYqR~~~~~~~------G------~~~~~~lIVsGGGGAfL 641 (831)
+++|+||+|.|+|..+..+. | ...++.+||+|+||+..
T Consensus 309 dlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~ 358 (424)
T 2qfp_A 309 DVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYG 358 (424)
T ss_dssp SEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTS
T ss_pred cEEEECChhhhheeccccCcceeccCCccccccCCCCcEEEEecCCCCcc
Confidence 99999999999999765320 1 12356899999999743
No 5
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.70 E-value=5.5e-17 Score=163.55 Aligned_cols=214 Identities=13% Similarity=0.046 Sum_probs=123.2
Q ss_pred CCCeEEEEEeecCCCCCCc----------------hHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCChhhh
Q 003314 379 KEDLWFDFMADTGDGGNSS----------------YSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTY 442 (831)
Q Consensus 379 ~~~~wFd~VgDtGDG~dSt----------------YtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs~e~Y 442 (831)
+..+.|.+++|+--+.... -.+.++++.- ..+++|+||++||+++........
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~d~vi~~GD~~~~~~~~~~~ 71 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQW-----------RRERVQCVVQLGDIIDGHNRRRDA 71 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHH-----------HHTTCSEEEECSCCBCTHHHHTTC
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHH-----------HhcCCCEEEECCCccCCCCCcchH
Confidence 4678999999998654221 1122222211 014689999999999864311100
Q ss_pred hcccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCeEEEeCCCCCCCC-ChHHHHHHhhccc----cCCccc
Q 003314 443 ERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFD-GLNTFMRFICHKS----WLGGWF 517 (831)
Q Consensus 443 ~~Rf~~PYe~Al~~~~~~~~e~i~~~kpelp~~~~~l~~~~gP~vfAIPGNHDWyD-GL~aFlr~F~~r~----~lgGW~ 517 (831)
....++.....+ ++...| ++++|||||++. +.+.|.+.+.... ...+..
T Consensus 72 ~~~~~~~~~~~l-------------------------~~~~~p-~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (322)
T 2nxf_A 72 SDRALDTVMAEL-------------------------DACSVD-VHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGSD 125 (322)
T ss_dssp HHHHHHHHHHHH-------------------------HTTCSE-EEECCCHHHHHHCCHHHHHTSTTCCCC------CEE
T ss_pred HHHHHHHHHHHH-------------------------HhcCCc-EEEecCCCCcccCCHHHHhhhhCCcccccccccccc
Confidence 011111111111 122345 999999999963 2334554443211 011222
Q ss_pred cCC-CcceEEEEcCCcEEEEEEecCCC----------------------------------------------CCCCHHH
Q 003314 518 MPQ-KKSYFALQLPKGWWVFGLDLALH----------------------------------------------CDIDVYQ 550 (831)
Q Consensus 518 mpQ-~~SYFAlrLp~~wWLiGLDtql~----------------------------------------------gdID~~Q 550 (831)
+|. ...||++....++.+++||+... +.+...|
T Consensus 126 ~~~~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q 205 (322)
T 2nxf_A 126 LIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQ 205 (322)
T ss_dssp CGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHH
T ss_pred cCCCCceEEEEecCCCEEEEEEcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHH
Confidence 332 33688998844599999998641 2355789
Q ss_pred HHHHHHHHHhhcCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhh-CC-ceeEEEcCccCCCceeeecCCCCCccc
Q 003314 551 FKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-KG-RCKLRIAGDMHHYMRHSYVPSDGPVYV 628 (831)
Q Consensus 551 ~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L-~~-RV~LvLAGHiHhYqR~~~~~~~G~~~~ 628 (831)
++||++.+++.-..+.++||++|+|.+........ ...+-+. +.+++ ++ +|+++|+||+|.+++..... |
T Consensus 206 ~~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~~~~~-~~~~~~~-~~~ll~~~~~v~~~~~GH~H~~~~~~~~~--g---- 277 (322)
T 2nxf_A 206 LQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPIC-LAWNHEA-VLSVLRSHQSVLCFIAGHDHDGGRCTDSS--G---- 277 (322)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEESSCCCTTSSCGGG-SCTTHHH-HHHHHHTCTTEEEEEECSCTTCEEEECTT--S----
T ss_pred HHHHHHHHHHHHhcCCcEEEEEccCCCCCCCCccc-cccCHHH-HHHHHhcCCCeEEEEcCCcCCCCceeccC--C----
Confidence 99999988743222568999999999876531100 0101122 23334 44 69999999999998876221 2
Q ss_pred ceEEEecCC
Q 003314 629 QHLLVNGCG 637 (831)
Q Consensus 629 ~~lIVsGGG 637 (831)
.++|++|+.
T Consensus 278 ~~~i~~~~~ 286 (322)
T 2nxf_A 278 AQHITLEGV 286 (322)
T ss_dssp CEEEECCCG
T ss_pred ceEEEecch
Confidence 256776654
No 6
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.67 E-value=1.2e-15 Score=151.81 Aligned_cols=168 Identities=16% Similarity=0.134 Sum_probs=105.2
Q ss_pred CCccEEEEcccccCCCCChhhhhcccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCeEEEeCCCCCCCCCh
Q 003314 421 PRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL 500 (831)
Q Consensus 421 PrgdfLVlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~~~~e~i~~~kpelp~~~~~l~~~~gP~vfAIPGNHDWyDGL 500 (831)
|++|+||++||+++.+ ..++|+ .+...+. .+..| +++||||||++..
T Consensus 40 ~~~d~vi~~GDl~~~~-~~~~~~-----~~~~~l~-------------------------~l~~p-~~~v~GNHD~~~~- 86 (274)
T 3d03_A 40 ERPDAVVVSGDIVNCG-RPEEYQ-----VARQILG-------------------------SLNYP-LYLIPGNHDDKAL- 86 (274)
T ss_dssp SCCSEEEEESCCBSSC-CHHHHH-----HHHHHHT-------------------------TCSSC-EEEECCTTSCHHH-
T ss_pred CCCCEEEECCCCCCCC-CHHHHH-----HHHHHHH-------------------------hcCCC-EEEECCCCCCHHH-
Confidence 5689999999999853 333442 2222222 22346 9999999998643
Q ss_pred HHHHHHhhccccCCccccCC--CcceEEEEcCCcEEEEEEecCC----CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecC
Q 003314 501 NTFMRFICHKSWLGGWFMPQ--KKSYFALQLPKGWWVFGLDLAL----HCDIDVYQFKFFAELVKEQVGERDSVIIMTHE 574 (831)
Q Consensus 501 ~aFlr~F~~r~~lgGW~mpQ--~~SYFAlrLp~~wWLiGLDtql----~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHe 574 (831)
+.+.+... |+ ..+. ...||+++.+. +.+++||+.. .+.++..|++|+++.+++. +++++|+++|+
T Consensus 87 --~~~~~~~~-~~---~~~~~~~~~~~~~~~~~-~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~~--~~~~~iv~~H~ 157 (274)
T 3d03_A 87 --FLEYLQPL-CP---QLGSDANNMRCAVDDFA-TRLLFIDSSRAGTSKGWLTDETISWLEAQLFEG--GDKPATIFMHH 157 (274)
T ss_dssp --HHHHHGGG-SG---GGCSCGGGCCEEECSSS-SEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHH--TTSCEEEEESS
T ss_pred --HHHHhhhh-hc---CcccCCCceEEEEEeCC-EEEEEEeCCCCCCCCCeeCHHHHHHHHHHHHhC--CCCCEEEEECC
Confidence 33333221 11 0111 12467888765 8999999975 4567789999999999752 46799999999
Q ss_pred CCCCcccccCcc-chhhHHHHHHhhh-CC-ceeEEEcCccCCCceeeecCCCCCcccceEEEecCCC
Q 003314 575 PNWLLDWYFNNV-SGKNVKHLICDYL-KG-RCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGG 638 (831)
Q Consensus 575 P~w~~~~~~~~~-t~~~l~~Lie~~L-~~-RV~LvLAGHiHhYqR~~~~~~~G~~~~~~lIVsGGGG 638 (831)
|.+..+....+. ...+...+ .+++ ++ +|+++|+||+|.++..... | . .+++++|.+
T Consensus 158 p~~~~~~~~~~~~~~~~~~~l-~~~l~~~~~v~~vl~GH~H~~~~~~~~---g---~-~~~~~pg~~ 216 (274)
T 3d03_A 158 PPLPLGNAQMDPIACENGHRL-LALVERFPSLTRIFCGHNHSLTMTQYR---Q---A-LISTLPGTV 216 (274)
T ss_dssp CSSCCSCTTTGGGSBTTTHHH-HHHHHHCTTEEEEEECSSSSCEEEEET---T---E-EEEECCCSS
T ss_pred CCcccCCcccCcccCcCHHHH-HHHHHhCCCceEEEeCCCCCchhheEC---C---E-EEEEcCCcc
Confidence 998764322111 11112222 3333 34 7999999999998765432 2 2 456665544
No 7
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.65 E-value=3.1e-15 Score=153.15 Aligned_cols=203 Identities=20% Similarity=0.229 Sum_probs=123.6
Q ss_pred CCCCeEEEEEeecCCCCCC---------chHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCChhhhhc--cc
Q 003314 378 EKEDLWFDFMADTGDGGNS---------SYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYER--RL 446 (831)
Q Consensus 378 ~~~~~wFd~VgDtGDG~dS---------tYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs~e~Y~~--Rf 446 (831)
+++++.|.+++|+--+.+. ...+.+++++-. + ..+++|+||++||+++. +..++|+. ++
T Consensus 22 ~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~-~--------~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~ 91 (330)
T 3ib7_A 22 PRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLN-Q--------SGLRPDAIVFTGDLADK-GEPAAYRKLRGL 91 (330)
T ss_dssp CCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHH-H--------HTCCCSEEEECSCCBTT-CCHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHH-h--------cCCCCCEEEECCCCCCC-CCHHHHHHHHHH
Confidence 4678999999999743221 223333333211 0 01468999999999875 43444432 22
Q ss_pred ccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCeEEEeCCCCCCCCChHHHHHHhhccccCCccccCCCcceEE
Q 003314 447 FRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFA 526 (831)
Q Consensus 447 ~~PYe~Al~~~~~~~~e~i~~~kpelp~~~~~l~~~~gP~vfAIPGNHDWyDGL~aFlr~F~~r~~lgGW~mpQ~~SYFA 526 (831)
++++... ...| +++||||||++. .+.+.+..... .....||.
T Consensus 92 l~~l~~~----------------------------~~~p-v~~v~GNHD~~~---~~~~~~~~~~~------~~~~~~~~ 133 (330)
T 3ib7_A 92 VEPFAAQ----------------------------LGAE-LVWVMGNHDDRA---ELRKFLLDEAP------SMAPLDRV 133 (330)
T ss_dssp HHHHHHH----------------------------HTCE-EEECCCTTSCHH---HHHHHHHCCCC------CCSCCCEE
T ss_pred HHHHHhh----------------------------cCCC-EEEeCCCCCCHH---HHHHHhccccc------ccCCcceE
Confidence 2322111 1234 999999999853 34444432211 12234678
Q ss_pred EEcCCcEEEEEEecCC----CCCCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCCcccccCcc-chhhHHHHHHhhh-C
Q 003314 527 LQLPKGWWVFGLDLAL----HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNV-SGKNVKHLICDYL-K 600 (831)
Q Consensus 527 lrLp~~wWLiGLDtql----~gdID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~-t~~~l~~Lie~~L-~ 600 (831)
++.+. +.+++||+.. .+.++..|++|+++.+++ .+++++|+++|||.+.......+. ...+...+ .+++ +
T Consensus 134 ~~~~~-~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~~--~~~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l-~~~l~~ 209 (330)
T 3ib7_A 134 CMIDG-LRIIVLDTSVPGHHHGEIRASQLGWLAEELAT--PAPDGTILALHHPPIPSVLDMAVTVELRDQAAL-GRVLRG 209 (330)
T ss_dssp EEETT-EEEEECCCCCTTCCSBCCCHHHHHHHHHHTTS--CCTTCEEEECSSCSSCCSSGGGGGGSBSCHHHH-HHHHTT
T ss_pred EEeCC-EEEEEecCCCCCCCCCccCHHHHHHHHHHHHh--cccCCeEEEEECCCCCCCccccccccccCHHHH-HHHHhc
Confidence 88885 8999999976 345788999999999964 334468999999988764322111 11122222 3333 5
Q ss_pred CceeEEEcCccCCCceeeecCCCCCcccceEEEecCCCC
Q 003314 601 GRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (831)
Q Consensus 601 ~RV~LvLAGHiHhYqR~~~~~~~G~~~~~~lIVsGGGGA 639 (831)
++++++++||+|..+..... | ..++++|+.+.
T Consensus 210 ~~v~~v~~GH~H~~~~~~~~---g----~~~~~~gs~~~ 241 (330)
T 3ib7_A 210 TDVRAILAGHLHYSTNATFV---G----IPVSVASATCY 241 (330)
T ss_dssp SSEEEEEECSSSSCEEEEET---T----EEEEECCCSSC
T ss_pred cCceEEEECCCCCcccceEC---C----EEEEecCccee
Confidence 69999999999987754422 2 25677777664
No 8
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.62 E-value=1.1e-14 Score=157.39 Aligned_cols=164 Identities=18% Similarity=0.238 Sum_probs=98.4
Q ss_pred CccEEEEcccccCCCCChhhhhcccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCeEEEeCCCCCCCCC--
Q 003314 422 RGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDG-- 499 (831)
Q Consensus 422 rgdfLVlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~~~~e~i~~~kpelp~~~~~l~~~~gP~vfAIPGNHDWyDG-- 499 (831)
++|+||++||+++.+ ..++|+. +.+-++. ++....| +++||||||.+.+
T Consensus 92 ~~d~vi~~GDl~~~~-~~~~~~~-~~~~l~~--------------------------l~~~~~~-~~~v~GNHD~~~~~~ 142 (443)
T 2xmo_A 92 KTDVLIISGDLTNNG-EKTSHEE-LAKKLTQ--------------------------VEKNGTQ-VFVVPGNHDINNPWA 142 (443)
T ss_dssp TCSEEEEESCCBSSC-CHHHHHH-HHHHHHH--------------------------HHHTTCE-EEEECCTTTSSCTTC
T ss_pred CCCEEEECCCCCCCC-CHHHHHH-HHHHHHH--------------------------HHhCCCe-EEEECCcCCCCCccc
Confidence 479999999999754 3333432 1111111 1111234 9999999999764
Q ss_pred ---------------hHHHHHHhhccccCCcc-ccCCCcceEEEEcCCcEEEEEEecCCC------------CCCCHHHH
Q 003314 500 ---------------LNTFMRFICHKSWLGGW-FMPQKKSYFALQLPKGWWVFGLDLALH------------CDIDVYQF 551 (831)
Q Consensus 500 ---------------L~aFlr~F~~r~~lgGW-~mpQ~~SYFAlrLp~~wWLiGLDtql~------------gdID~~Q~ 551 (831)
.+.|.+.|....+.... ..+...+| .+....+++|++||++.. +.++..|+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql 221 (443)
T 2xmo_A 143 RKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSY-LAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTL 221 (443)
T ss_dssp EEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCE-EECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHH
T ss_pred cccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceE-EEecCCCEEEEEeeCCCcCcccccCCCCcCCccCHHHH
Confidence 23444444321100000 01123345 555555799999999742 55788999
Q ss_pred HHHHHHHHhhcCCCCeEEEEecCCCCCcccccCcc----chhhHHHHHHhhhCCceeEEEcCccCCCceee
Q 003314 552 KFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNV----SGKNVKHLICDYLKGRCKLRIAGDMHHYMRHS 618 (831)
Q Consensus 552 ~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~----t~~~l~~Lie~~L~~RV~LvLAGHiHhYqR~~ 618 (831)
+|+++.+++....+.++|+++|||.+.......+. ..+.+..++++ ++|+++|+||+|......
T Consensus 222 ~wL~~~L~~~~~~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~---~~v~lvl~GH~H~~~~~~ 289 (443)
T 2xmo_A 222 DWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTE---GAMDFSLSGHIHTQNIRS 289 (443)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHH---TTCCEEEECSSCSCEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEEECCCCcccccccccccccccHHHHHHHHHH---cCCeEEEECCcccCchhh
Confidence 99999987533345689999999998754322111 12233344444 489999999999866543
No 9
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=99.54 E-value=1.3e-13 Score=155.43 Aligned_cols=199 Identities=11% Similarity=0.074 Sum_probs=117.9
Q ss_pred CCeEEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCChh-------------------
Q 003314 380 EDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAF------------------- 440 (831)
Q Consensus 380 ~~~wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs~e------------------- 440 (831)
+++.|.+++|.|-. +..|.+-+.|++ ..+||+|++||++|.++...
T Consensus 115 ~~~rfa~~sc~~~~-~g~~~~~~~ia~--------------~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl 179 (527)
T 2yeq_A 115 PQMTFAFASCQQYE-HGYYTAYKHMAK--------------EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITL 179 (527)
T ss_dssp CCEEEEEECCCCGG-GCCCHHHHHHTT--------------SCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSH
T ss_pred CCeEEEEEecCCCC-CCccHHHHHHHh--------------cCCCEEEecCCcccCCCCCcccccccccccCCcccccCH
Confidence 68999999998841 112444444443 14799999999999876421
Q ss_pred -hhhcccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCeEEEeCCCCCCCCCh-------------------
Q 003314 441 -TYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL------------------- 500 (831)
Q Consensus 441 -~Y~~Rf~~PYe~Al~~~~~~~~e~i~~~kpelp~~~~~l~~~~gP~vfAIPGNHDWyDGL------------------- 500 (831)
+|+.++ +..+.. |++ ..+. ...| +++|.||||+.++-
T Consensus 180 ~~yr~~y----~~~~~d-------------p~l----q~~~-a~~P-~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~ 236 (527)
T 2yeq_A 180 QDYRNRH----AQYRSD-------------ANL----KAAH-AAFP-WVVTWDDHEVENNYANKIPEKGQSVEAFVLRRA 236 (527)
T ss_dssp HHHHHHH----HHHHTC-------------HHH----HHHH-HHSE-EEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHH
T ss_pred HHHHHHH----HHHhCC-------------HHH----HHHH-hcCC-EEEecccccccCCCCCCcccccCCcccHHHHHH
Confidence 122211 111100 000 0000 0235 99999999985431
Q ss_pred HHHHHHhhccccCCccccC---CCcceEEEEcCCcEEEEEEecCCCC----------------------CCCHHHHHHHH
Q 003314 501 NTFMRFICHKSWLGGWFMP---QKKSYFALQLPKGWWVFGLDLALHC----------------------DIDVYQFKFFA 555 (831)
Q Consensus 501 ~aFlr~F~~r~~lgGW~mp---Q~~SYFAlrLp~~wWLiGLDtql~g----------------------dID~~Q~~wFe 555 (831)
.++..||-... +....+| ..+-||+++.+....|++||+...- .+..+|++||+
T Consensus 237 ~A~~ay~e~~P-~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~ 315 (527)
T 2yeq_A 237 AAYQAYYEHMP-LRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLF 315 (527)
T ss_dssp HHHHHHHHHSC-CCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHH
T ss_pred HHHHHHHHhCC-CCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHH
Confidence 12333332110 1111122 2346999999986899999996421 14579999999
Q ss_pred HHHHhhcCCCCeEEEEecCCCCCcccccCc------c---chhhHHHHHHhhh-CCce--eEEEcCccCCCceeee
Q 003314 556 ELVKEQVGERDSVIIMTHEPNWLLDWYFNN------V---SGKNVKHLICDYL-KGRC--KLRIAGDMHHYMRHSY 619 (831)
Q Consensus 556 ~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~------~---t~~~l~~Lie~~L-~~RV--~LvLAGHiHhYqR~~~ 619 (831)
+.|++ .+.+|+||++|.|.+..+..... + .....++.+.+++ +++| .++||||+|+|++...
T Consensus 316 ~~L~~--s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~ 389 (527)
T 2yeq_A 316 NNLGS--STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNL 389 (527)
T ss_dssp HHHHH--CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEE
T ss_pred HHHhc--CCCCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhc
Confidence 99975 45679999999999876532110 0 0011223333434 4577 5999999999998754
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.25 E-value=1.8e-11 Score=118.36 Aligned_cols=175 Identities=11% Similarity=0.036 Sum_probs=92.5
Q ss_pred CeEEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCChhhhhcccccchhhhcCCCCCC
Q 003314 381 DLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWY 460 (831)
Q Consensus 381 ~~wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~~ 460 (831)
.+.+.+++|+=.+.+ ...++++... ..++|+||++||++......+++.. +++..
T Consensus 5 ~mri~~iSD~H~~~~---~~~~~~~~~~-----------~~~~D~vi~~GDl~~~~~~~~~~~~-~~~~l---------- 59 (228)
T 1uf3_A 5 VRYILATSNPMGDLE---ALEKFVKLAP-----------DTGADAIALIGNLMPKAAKSRDYAA-FFRIL---------- 59 (228)
T ss_dssp CCEEEEEECCTTCHH---HHHHHHTHHH-----------HHTCSEEEEESCSSCTTCCHHHHHH-HHHHH----------
T ss_pred eEEEEEEeeccCCHH---HHHHHHHHHh-----------hcCCCEEEECCCCCCCCCCHHHHHH-HHHHH----------
Confidence 578999999965421 2333332110 1157999999999876534433322 21222
Q ss_pred cccccccCCCCCCCCCcccccCCCCeEEEeCCCCCCCCChHHHHHHhh-ccccCCccccCCCcceEEEEcCCcEEEEEEe
Q 003314 461 KKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFIC-HKSWLGGWFMPQKKSYFALQLPKGWWVFGLD 539 (831)
Q Consensus 461 ~~e~i~~~kpelp~~~~~l~~~~gP~vfAIPGNHDWyDGL~aFlr~F~-~r~~lgGW~mpQ~~SYFAlrLp~~wWLiGLD 539 (831)
++...| +++||||||.+.. +.+.+.+. ...+.+.+....+ .+.++.+++++|++
T Consensus 60 -------------------~~~~~p-v~~v~GNHD~~~~-~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~i~g~~ 114 (228)
T 1uf3_A 60 -------------------SEAHLP-TAYVPGPQDAPIW-EYLREAANVELVHPEMRNVHET----FTFWRGPYLVAGVG 114 (228)
T ss_dssp -------------------GGGCSC-EEEECCTTSCSHH-HHHHHHHHHHHHCTTEEECBTS----EEEETTTEEEEEEC
T ss_pred -------------------HhcCCc-EEEECCCCCchhH-HHHHhhhhhhccCcceEEcccc----eEeeCCCcEEecCC
Confidence 122345 9999999998653 21111110 0001112222211 24455568999998
Q ss_pred cCCCC--CCCHH--------HHHHHHHHHHhhcCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcC
Q 003314 540 LALHC--DIDVY--------QFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAG 609 (831)
Q Consensus 540 tql~g--dID~~--------Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAG 609 (831)
..... .++.. +.+|.++.+++ .. +.+.|+++|+|.+..+... ...+.+..++++. +++++++|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~-~~~~il~~H~p~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~G 187 (228)
T 1uf3_A 115 GEIADEGEPEEHEALRYPAWVAEYRLKALWE-LK-DYPKIFLFHTMPYHKGLNE--QGSHEVAHLIKTH---NPLLVLVA 187 (228)
T ss_dssp SEEESSSCCBSSSSCEEEHHHHHHHHGGGGG-SC-SCCEEEEESSCBCBTTTBT--TSBHHHHHHHHHH---CCSEEEEC
T ss_pred CCcCCCCccChhhcccchhhhHHHHHHHHHh-CC-CCCeEEEEccCcccCCccc--cCHHHHHHHHHHh---CCCEEEEc
Confidence 53211 12222 23444444432 22 4588999999987542111 1122344444444 89999999
Q ss_pred ccC
Q 003314 610 DMH 612 (831)
Q Consensus 610 HiH 612 (831)
|+|
T Consensus 188 H~H 190 (228)
T 1uf3_A 188 GKG 190 (228)
T ss_dssp CSS
T ss_pred ccc
Confidence 999
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.05 E-value=1e-09 Score=109.09 Aligned_cols=118 Identities=13% Similarity=0.125 Sum_probs=60.2
Q ss_pred eEEEeCCCCCCCCChHHHHHHhhccccCCccccCCCcceEEEEcCCcEEEEEEecCCCC-CCCHHHHH----HHH----H
Q 003314 486 QCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHC-DIDVYQFK----FFA----E 556 (831)
Q Consensus 486 ~vfAIPGNHDWyDGL~aFlr~F~~r~~lgGW~mpQ~~SYFAlrLp~~wWLiGLDtql~g-dID~~Q~~----wFe----~ 556 (831)
++++||||||.+... .+.+.+.......+...... . .++.++ +++++|++..... .++..|.. |+. +
T Consensus 91 pv~~v~GNHD~~~~~-~~~~~~~~~~~~~~~~~l~~-~-~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (260)
T 2yvt_A 91 KTFVVPGKNDAPLKI-FLRAAYEAETAYPNIRVLHE-G-FAGWRG-EFEVIGFGGLLTEHEFEEDFVLKYPRWYVEYILK 166 (260)
T ss_dssp EEEEECCTTSCCHHH-HHHHHHHTTTTCTTEEECSS-E-EEEETT-TEEEEEECSEEESSCCBSSSSCEEEHHHHHHHGG
T ss_pred cEEEEcCCCCchhhh-hHHHHhhhccCCcceEEecC-c-ceEEEC-CEEEEecCCCcCCCCcCHHHHhhcchhhHHHHHH
Confidence 499999999986421 11122211100011111122 1 236666 5899999853211 12222221 332 2
Q ss_pred HHHhhcCCCCeEEEEecCCCCCc--ccc---cCccchhhHHHHHHhhhCCceeEEEcCccC
Q 003314 557 LVKEQVGERDSVIIMTHEPNWLL--DWY---FNNVSGKNVKHLICDYLKGRCKLRIAGDMH 612 (831)
Q Consensus 557 ll~~~v~~~d~VIL~tHeP~w~~--~~~---~~~~t~~~l~~Lie~~L~~RV~LvLAGHiH 612 (831)
.++ +.+ +.+.|+++|+|++.. +.. ......+.+..++++. +++++++||+|
T Consensus 167 ~l~-~~~-~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~---~~~~vl~GH~H 222 (260)
T 2yvt_A 167 FVN-ELK-PRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSL---NPEVAIVGHVG 222 (260)
T ss_dssp GGG-GSC-CCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHH---CCSEEEECSSC
T ss_pred HHH-hcC-CCCEEEEECCCccccccccCcccccccCcHHHHHHHHHh---CCCEEEECCcc
Confidence 232 222 457799999998743 111 0011123444555554 89999999999
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.00 E-value=7.3e-10 Score=116.35 Aligned_cols=201 Identities=15% Similarity=0.174 Sum_probs=98.6
Q ss_pred ccCCCCCeEEEEEeecCCC------CCC-------chHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCChhh
Q 003314 375 HLSEKEDLWFDFMADTGDG------GNS-------SYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFT 441 (831)
Q Consensus 375 ~~~~~~~~wFd~VgDtGDG------~dS-------tYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs~e~ 441 (831)
|.-+.+++.|..++|+=-| .+. ...+.+++.. .. ..++|+|+++||++|..+....
T Consensus 12 ~~~~~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~-~~----------~~~~D~vliaGD~l~d~~~~~~ 80 (336)
T 2q8u_A 12 HVINLKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEE-AE----------KREVDLILLTGDLLHSRNNPSV 80 (336)
T ss_dssp CCTTCCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHH-HH----------HHTCSEEEEESCSBSCSSCCCH
T ss_pred hheecCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHH-HH----------HhCCCEEEECCccccCCCCCCH
Confidence 3446688999999999333 111 1123333321 11 1257999999996676554322
Q ss_pred hh-cccccchhhhcCCCCCCcccccccCCCCCCCCCcccccCCCCeEEEeCCCCCCCCChHHHHHHhhccccCCccccCC
Q 003314 442 YE-RRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQ 520 (831)
Q Consensus 442 Y~-~Rf~~PYe~Al~~~~~~~~e~i~~~kpelp~~~~~l~~~~gP~vfAIPGNHDWyDGL~aFlr~F~~r~~lgGW~mpQ 520 (831)
.. .++.+-++. +++. .| +++||||||.+. +..+.+++..... ......
T Consensus 81 ~~~~~~~~~l~~--------------------------L~~~-~p-v~~i~GNHD~~~-~~~~~~~l~~~g~--nv~v~~ 129 (336)
T 2q8u_A 81 VALHDLLDYLKR--------------------------MMRT-AP-VVVLPGNHDWKG-LKLFGNFVTSISS--DITFVM 129 (336)
T ss_dssp HHHHHHHHHHHH--------------------------HHHH-SC-EEECCC-------CHHHHHHHHHHCS--SEEECC
T ss_pred HHHHHHHHHHHH--------------------------HHhc-CC-EEEECCCCCccc-cccHHHHHHhcCC--EEEEEe
Confidence 21 122222221 1111 35 999999999987 6665554421100 011111
Q ss_pred C-cceEEEEc-CCcEEEEEEecCCCCCC-------CHHHHHHHHHHHHhhc-CCCCeEEEEecCCCCCcccccCccchhh
Q 003314 521 K-KSYFALQL-PKGWWVFGLDLALHCDI-------DVYQFKFFAELVKEQV-GERDSVIIMTHEPNWLLDWYFNNVSGKN 590 (831)
Q Consensus 521 ~-~SYFAlrL-p~~wWLiGLDtql~gdI-------D~~Q~~wFe~ll~~~v-~~~d~VIL~tHeP~w~~~~~~~~~t~~~ 590 (831)
+ .......+ ..+..+.|++....... ...|.+|+.+.+++.. +++.+.|+++|.|........+.....
T Consensus 130 ~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~~~~~~~- 208 (336)
T 2q8u_A 130 SFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIEQGR- 208 (336)
T ss_dssp SSSCEEEECTTSCEEEEEEECCC-------CCSSHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC--------C-
T ss_pred cccccCceEEeCCCEEEEECCCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCCCCccchh-
Confidence 1 00001122 23578999975433221 1357788877665444 567799999999986432110000000
Q ss_pred HHHHHHhhhCCceeEEEcCccCCCceee
Q 003314 591 VKHLICDYLKGRCKLRIAGDMHHYMRHS 618 (831)
Q Consensus 591 l~~Lie~~L~~RV~LvLAGHiHhYqR~~ 618 (831)
...+-..+++.+++++++||+|..+...
T Consensus 209 ~~~v~~~l~~~~~d~v~~GH~H~~~~~~ 236 (336)
T 2q8u_A 209 EIIINRALIPSVVDYAALGHIHSFREIQ 236 (336)
T ss_dssp CCEECGGGSCTTSSEEEEESCSSCEEEE
T ss_pred hcccCHHHccccCCEEEEccccCceEeC
Confidence 0000012335689999999999877653
No 13
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=98.62 E-value=4.2e-07 Score=96.59 Aligned_cols=202 Identities=18% Similarity=0.215 Sum_probs=104.0
Q ss_pred CCCCCeEEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCChhhhhcccccchhhhcCC
Q 003314 377 SEKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQP 456 (831)
Q Consensus 377 ~~~~~~wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~ 456 (831)
...+++.+.+++|+=..... ++ +|.+|+||++||++.. +..++++. +...+
T Consensus 55 ~~~~~mri~~iSD~H~~~~~------------l~---------i~~~D~vi~aGDl~~~-g~~~e~~~-----~~~~L-- 105 (296)
T 3rl5_A 55 KPAGHTRFVCISDTRSRTDG------------IQ---------MPYGDILLHTGDFTEL-GLPSEVKK-----FNDWL-- 105 (296)
T ss_dssp CCTTEEEEEEEBCCTTCCTT------------CC---------CCSCSEEEECSCCSSS-CCHHHHHH-----HHHHH--
T ss_pred CCCCCeEEEEEeeCCCCcch------------hc---------cCCCCEEEECCcccCC-CCHHHHHH-----HHHHH--
Confidence 45678999999999654321 11 3568999999999864 44444432 11111
Q ss_pred CCCCcccccccCCCCCCCCCcccccCCCCeEEEeCCCCCCCCChHHHHHHhhccc-------------cCCccc------
Q 003314 457 PPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKS-------------WLGGWF------ 517 (831)
Q Consensus 457 ~~~~~~e~i~~~kpelp~~~~~l~~~~gP~vfAIPGNHDWyDGL~aFlr~F~~r~-------------~lgGW~------ 517 (831)
+..+.+++++|+||||++-+-. +.+....+. ....|+
T Consensus 106 -----------------------~~l~~~~v~~V~GNHD~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 161 (296)
T 3rl5_A 106 -----------------------GNLPYEYKIVIAGNHELTFDKE-FMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNS 161 (296)
T ss_dssp -----------------------HTSCCSEEEECCCTTCGGGCHH-HHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTS
T ss_pred -----------------------HhCCCCeEEEEcCCcccccchh-hhhhhhcccccccccccccccchhhhHhhhcCCe
Confidence 2223456999999999875533 333221100 001121
Q ss_pred -cCCCcceEEEEcCCcEEEEEEecCCCCC---CCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCCccccc--C--ccchh
Q 003314 518 -MPQKKSYFALQLPKGWWVFGLDLALHCD---IDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYF--N--NVSGK 589 (831)
Q Consensus 518 -mpQ~~SYFAlrLp~~wWLiGLDtql~gd---ID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~--~--~~t~~ 589 (831)
--+.+++ .+ .|+.|+|.--..... ...++.+.+.+... ++ +++.-|++||.|++...... + ....+
T Consensus 162 ~~L~~~~~---~i-~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~-~i-p~~~dILvTH~PP~g~~D~~~~~~~~~G~~ 235 (296)
T 3rl5_A 162 IYLQDSEV---TV-KGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWN-LI-PEGTDILMTHGPPLGFRDWVPKELQRVGCV 235 (296)
T ss_dssp EECSSEEE---EE-TTEEEEEECCBCC--CCTTBCCTTHHHHHHHT-TS-CTTCSEEEESSCBTTSSCEEGGGTEECSBH
T ss_pred EEecCCcE---EE-CCEEEEEecCCCCCCCcCCCcchHHHHHHHHh-hC-CCCCeEEEECCCccccccccccccCcCChH
Confidence 1122222 23 258888853322111 11111223333222 24 34567999999998763211 0 01112
Q ss_pred hHHHHHHhhhCCceeEEEcCccCCCceeeecCCCCCcccceEEEecCCCCCCCccc
Q 003314 590 NVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFLHPTH 645 (831)
Q Consensus 590 ~l~~Lie~~L~~RV~LvLAGHiHhYqR~~~~~~~G~~~~~~lIVsGGGGAfLhPTH 645 (831)
.+.+.+++ +.++++.++||+|......... ...+|-.|.-|--..|++
T Consensus 236 ~L~~~i~~--~~~p~l~v~GH~H~~~~~~~~g------~t~vvNpGs~~~~~~~~n 283 (296)
T 3rl5_A 236 ELLNTVQR--RVRPKLHVFGGIHEGYGTMTDG------YTTYINASTCTVSFQPTN 283 (296)
T ss_dssp HHHHHHHH--TTCCSEEEECSCGGGCEEEECS------SCEEEECBCSCTTSCCCS
T ss_pred HHHHHHHH--hcCCCEEEECCccCCCceEEEC------CEEEEECCcCCcCcCCCC
Confidence 33333321 4689999999999643332221 124555666655444443
No 14
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=98.42 E-value=1.5e-06 Score=93.71 Aligned_cols=114 Identities=13% Similarity=0.109 Sum_probs=58.7
Q ss_pred eEEEeCCCCCCCCChHH--HHHHhhccccCCccccCCCcceEEEEcCCcEEEEEEecCCCCCCCHHHHHHHHHHHHhhcC
Q 003314 486 QCYIIPGNHDWFDGLNT--FMRFICHKSWLGGWFMPQKKSYFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQVG 563 (831)
Q Consensus 486 ~vfAIPGNHDWyDGL~a--Flr~F~~r~~lgGW~mpQ~~SYFAlrLp~~wWLiGLDtql~gdID~~Q~~wFe~ll~~~v~ 563 (831)
++++|+||||....... ..+.+. .. .....+..++ +.-..++.++|++...... .....+++..+.. +..
T Consensus 97 pv~~v~GNHD~~~~~~~~~~~~~l~--~~---v~~l~~~~v~-~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~~-~~~ 168 (386)
T 3av0_A 97 KVYIVAGNHEMPRRLGEESPLALLK--DY---VKILDGKDVI-NVNGEEIFICGTYYHKKSK-REEMLDKLKNFES-EAK 168 (386)
T ss_dssp EEEECCCGGGSCSSTTSCCGGGGGT--TT---CEECSEEEEE-EETTEEEEEEEECCCCSTT-HHHHHHHHHHHHH-HHH
T ss_pred cEEEEcCCCCCCccccccCHHHHHH--HH---eEEcCCCcEE-EeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhhh-hcc
Confidence 49999999998765422 001110 00 1111111232 2222358899998754332 1233444444322 123
Q ss_pred CCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCce
Q 003314 564 ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (831)
Q Consensus 564 ~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYqR 616 (831)
++...|+++|+|...... +.. ...+ .. +.. ++++++||+|..++
T Consensus 169 ~~~~~Ill~H~~~~~~~~--~~~-~~~~----~~-l~~-~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 169 NYKKKILMLHQGINPYIP--LDY-ELEH----FD-LPK-FSYYALGHIHKRIL 212 (386)
T ss_dssp TCSSEEEEECCCCTTTSS--SSC-SSCG----GG-SCC-CSEEEECSCCSCEE
T ss_pred cCCCEEEEECcCccccCC--CCc-ccCH----HH-hhh-CCeEEccCCCCCcc
Confidence 466889999999753211 010 0011 12 233 99999999997643
No 15
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=98.40 E-value=1.3e-06 Score=94.22 Aligned_cols=127 Identities=17% Similarity=0.215 Sum_probs=67.4
Q ss_pred CCeEEEeCCCCCCCCChHHHHHHhhc-cccCCccccCCCcceEEEEcCCc--EEEEEEecCCCCC----CCHHHHHHHHH
Q 003314 484 GPQCYIIPGNHDWFDGLNTFMRFICH-KSWLGGWFMPQKKSYFALQLPKG--WWVFGLDLALHCD----IDVYQFKFFAE 556 (831)
Q Consensus 484 gP~vfAIPGNHDWyDGL~aFlr~F~~-r~~lgGW~mpQ~~SYFAlrLp~~--wWLiGLDtql~gd----ID~~Q~~wFe~ 556 (831)
.| +++|+||||+. |+..+-..... .....-...+++ ..+...+| ..+.|+.-....+ ....+.+|+.+
T Consensus 79 ~~-v~~i~GNHD~~-~~~~~~~~~~~~~~~~~~~~~~~~---v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~~l~~ 153 (379)
T 3tho_B 79 AP-VVVLPGNQDWK-GLKLFGNFVTSISSDITFVMSFEP---VDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLES 153 (379)
T ss_dssp SC-EEECCCTTSCT-THHHHHHHHHTTCSSEEECCSSCC---EEEECTTCCEEEEEEECCCCCC----CHHHHHHHHHHH
T ss_pred CC-EEEEcCCCccc-cCccccccccccCCcceeecccce---EEEEcCCCCEEEEEECCCCCHHHHhhhhccchHHHHHH
Confidence 35 99999999964 43322222110 000000111222 34443333 7888886533222 12457788887
Q ss_pred HHH----hhcCCCCeEEEEecCCCCCcccccCccchhhH-HHHHHhhhCCceeEEEcCccCCCcee
Q 003314 557 LVK----EQVGERDSVIIMTHEPNWLLDWYFNNVSGKNV-KHLICDYLKGRCKLRIAGDMHHYMRH 617 (831)
Q Consensus 557 ll~----~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l-~~Lie~~L~~RV~LvLAGHiHhYqR~ 617 (831)
.++ +..++++..|+++|.|.-......+++ ..+ ..+-...++.+++.++.||+|..+..
T Consensus 154 ~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~~~se--~~~~~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 154 RLNKLYEEALKKEDFAIFMGHFTVEGLAGYAGIE--QGREIIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEeccccCCccCCCCc--cccccccCHHHcCcCCCEEEcccccCCeEe
Confidence 765 345577899999999875322101111 000 01112333578999999999987654
No 16
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.29 E-value=5.2e-06 Score=87.34 Aligned_cols=121 Identities=17% Similarity=0.213 Sum_probs=58.3
Q ss_pred CCeEEEeCCCCCCCCChHHHHHHhhccc--cCCccc-cCCCcceEEEE-cC----------CcEEEEEEecCCCCCCCHH
Q 003314 484 GPQCYIIPGNHDWFDGLNTFMRFICHKS--WLGGWF-MPQKKSYFALQ-LP----------KGWWVFGLDLALHCDIDVY 549 (831)
Q Consensus 484 gP~vfAIPGNHDWyDGL~aFlr~F~~r~--~lgGW~-mpQ~~SYFAlr-Lp----------~~wWLiGLDtql~gdID~~ 549 (831)
.| +++|+||||.+..+....+.+.... .+-+.. .+....++... .+ .+..+.|++. .+
T Consensus 76 ~~-v~~v~GNHD~~~~~~~~~~~l~~~g~v~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~-----~~-- 147 (333)
T 1ii7_A 76 IP-VFAIEGNHDRTQRGPSVLNLLEDFGLVYVIGMRKEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKY-----MS-- 147 (333)
T ss_dssp CC-EEEECCTTTCCSSSCCHHHHHHHTTSCEECEEESSCCCSSSEEEEECTTSCEEEEEEETTEEEEEECC-----CC--
T ss_pred Cc-EEEeCCcCCCccCCcCHHHHHHHcCCcEEecccccccccceeeecccCCCceeeccCcCCEEEEecCC-----cC--
Confidence 35 9999999999865544444332111 011110 11111232322 22 2355666642 22
Q ss_pred HHHHHHH---HHHhhcCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCcee
Q 003314 550 QFKFFAE---LVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (831)
Q Consensus 550 Q~~wFe~---ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYqR~ 617 (831)
.+|+++ .+++..+++...|+++|.|.............+.. +.. +..+++++++||+|..|..
T Consensus 148 -~~~~~~~~~~l~~~~~~~~~~Ill~H~~~~~~~~~~~~~~~~~~---~~~-l~~~~dyvalGH~H~~q~~ 213 (333)
T 1ii7_A 148 -SAWFEANKEILKRLFRPTDNAILMLHQGVREVSEARGEDYFEIG---LGD-LPEGYLYYALGHIHKRYET 213 (333)
T ss_dssp -HHHHHSSTTHHHHHCCCCSSEEEEEECCBHHHHHTTTCCCCSBC---GGG-SCTTCSEEEEESCSSCEEE
T ss_pred -HHHHHHHHHHHHHhhCCCCCeEEEEcCChhhcccccccccceec---HHH-CCccCCEEEccccccceec
Confidence 234432 13333445567999999996421110000000000 112 2347899999999987754
No 17
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=98.13 E-value=1.1e-06 Score=87.63 Aligned_cols=83 Identities=5% Similarity=-0.126 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHHHhh-cCCCCeEEEEecCCCCCcc-ccc-CccchhhHHHHHHhhhCC-ceeEEEcCccCCCceeeecC
Q 003314 546 IDVYQFKFFAELVKEQ-VGERDSVIIMTHEPNWLLD-WYF-NNVSGKNVKHLICDYLKG-RCKLRIAGDMHHYMRHSYVP 621 (831)
Q Consensus 546 ID~~Q~~wFe~ll~~~-v~~~d~VIL~tHeP~w~~~-~~~-~~~t~~~l~~Lie~~L~~-RV~LvLAGHiHhYqR~~~~~ 621 (831)
++.+|++||+++.... .+-++..|+++|+|..... .+. .....+.+..+++ +. +++++++||+|....... .
T Consensus 110 l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~~p~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~vi~GHtH~~~~~~~-~ 185 (252)
T 1nnw_A 110 LGHEGREYLRDLPIYLVDKIGGNEVFGVYGSPINPFDGEVLAEQPTSYYEAIMR---PVKDYEMLIVASPMYPVDAMT-R 185 (252)
T ss_dssp HHHHHHHHHHTSCSCEEEEETTEEEEEESSCSSCTTTCCCCSSCCHHHHHHHHG---GGTTSSEEEESTTCSEEEEEE-T
T ss_pred CCHHHHHHHHhCCceEEEeeCCcEEEEEcCCCCCCcccccCCCCCHHHHHHHHh---cCCCCCEEEECCccccceEec-C
Confidence 4567889988754311 1113467899998874321 111 1111122333332 33 799999999997443321 1
Q ss_pred CCCCcccceEEEecCCC
Q 003314 622 SDGPVYVQHLLVNGCGG 638 (831)
Q Consensus 622 ~~G~~~~~~lIVsGGGG 638 (831)
| ..+|..|+-|
T Consensus 186 --~----~~~in~Gs~~ 196 (252)
T 1nnw_A 186 --Y----GRVVCPGSVG 196 (252)
T ss_dssp --T----EEEEEECCSS
T ss_pred --C----eEEEECCCcc
Confidence 1 2567777655
No 18
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.10 E-value=4.1e-06 Score=81.43 Aligned_cols=50 Identities=20% Similarity=0.198 Sum_probs=30.0
Q ss_pred CCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCcee
Q 003314 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (831)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYqR~ 617 (831)
++..|+++|+|....+........+.+..+++ +.+++++++||+|.....
T Consensus 105 ~~~~i~~~H~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~vi~GHtH~~~~~ 154 (195)
T 1xm7_A 105 KGKRILLSHYPAKDPITERYPDRQEMVREIYF---KENCDLLIHGHVHWNREG 154 (195)
T ss_dssp TTEEEEEESSCSSCSSCCSCHHHHHHHHHHHH---HTTCSEEEECCCCCCSCC
T ss_pred CCcEEEEEccCCcCCCcccccchHHHHHHHHH---HcCCcEEEECCcCCCCcc
Confidence 34679999999876542211111122222333 347999999999975443
No 19
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=97.95 E-value=7.6e-05 Score=72.58 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=25.3
Q ss_pred CeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCc
Q 003314 566 DSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (831)
Q Consensus 566 d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYq 615 (831)
+..|+++|.+.+... . ..+.+..++++ .+++++++||+|...
T Consensus 89 ~~~i~l~Hg~~~~~~---~--~~~~l~~~~~~---~~~d~vi~GHtH~~~ 130 (192)
T 1z2w_A 89 QFKIGLIHGHQVIPW---G--DMASLALLQRQ---FDVDILISGHTHKFE 130 (192)
T ss_dssp TEEEEEECSCCCCBT---T--CHHHHHHHHHH---HSSSEEECCSSCCCE
T ss_pred CEEEEEECCCcCCCC---C--CHHHHHHHHHh---cCCCEEEECCcCcCc
Confidence 467899995444321 1 12233333333 378999999999754
No 20
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=97.76 E-value=5.5e-05 Score=72.47 Aligned_cols=58 Identities=14% Similarity=0.070 Sum_probs=34.5
Q ss_pred CeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCceeeecCCCCCcccceEEEecCCC
Q 003314 566 DSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGG 638 (831)
Q Consensus 566 d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYqR~~~~~~~G~~~~~~lIVsGGGG 638 (831)
+..|+++|.|.+... . ..+.+..++++ .+++++++||+|....... . ...+|..|+-|
T Consensus 77 ~~~i~~~Hg~~~~~~---~--~~~~l~~~~~~---~~~d~vi~GHtH~~~~~~~-~------~~~~inpGs~~ 134 (176)
T 3ck2_A 77 STKIIQTHGHLFDIN---F--NFQKLDYWAQE---EEAAICLYGHLHVPSAWLE-G------KILFLNPGSIS 134 (176)
T ss_dssp TEEEEEECSGGGTTT---T--CSHHHHHHHHH---TTCSEEECCSSCCEEEEEE-T------TEEEEEECCSS
T ss_pred CeEEEEECCCccCCC---C--CHHHHHHHHHh---cCCCEEEECCcCCCCcEEE-C------CEEEEECCCCC
Confidence 467999999986432 1 12233333333 4899999999997543321 1 12456666554
No 21
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=97.75 E-value=3.4e-05 Score=75.84 Aligned_cols=54 Identities=17% Similarity=0.123 Sum_probs=32.7
Q ss_pred CCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCceeeecCCCCCcccceEEEecCCCC
Q 003314 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA 639 (831)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYqR~~~~~~~G~~~~~~lIVsGGGGA 639 (831)
++..|+++|.|.+. +.+.+.+. .+++++++||+|..+.... + ...+|..|..|.
T Consensus 114 ~~~~ill~Hg~~~~------------l~~~~~~~--~~~d~vl~GHtH~~~~~~~----~---~~~~iNpGs~~~ 167 (190)
T 1s3l_A 114 DDLKFFITHGHHQS------------VLEMAIKS--GLYDVVIYGHTHERVFEEV----D---DVLVINPGECCG 167 (190)
T ss_dssp TTEEEEEEESCCHH------------HHHHHHHH--SCCSEEEEECSSCCEEEEE----T---TEEEEECCCSSC
T ss_pred CCcEEEEECCChHH------------HHHHHHhc--CCCCEEEECCCCCcceEEE----C---CEEEEECCcccc
Confidence 45789999998742 11111211 3899999999997554321 1 224566676553
No 22
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=97.72 E-value=4.7e-05 Score=75.71 Aligned_cols=43 Identities=14% Similarity=0.163 Sum_probs=26.2
Q ss_pred CCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCc
Q 003314 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (831)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYq 615 (831)
++..|+++|.+.+... . ..+.+..++++ .+++++++||+|...
T Consensus 112 ~~~~i~l~Hg~~~~~~---~--~~~~l~~~~~~---~~~d~vl~GHtH~~~ 154 (215)
T 2a22_A 112 GEFKIGLMHGNQVLPW---D--DPGSLEQWQRR---LDCDILVTGHTHKLR 154 (215)
T ss_dssp TTEEEEEECSTTSSST---T--CHHHHHHHHHH---HTCSEEEECSSCCCE
T ss_pred CCeEEEEEcCCccCCC---C--CHHHHHHHHhh---cCCCEEEECCcCCCc
Confidence 4467999995544321 1 12333333333 379999999999754
No 23
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=97.60 E-value=9.9e-05 Score=76.25 Aligned_cols=87 Identities=11% Similarity=0.106 Sum_probs=47.2
Q ss_pred CCCCHHHHHHHHHHHHhh-cCCCCeEEEEecCCCCCcc-cccCccchhhHHHHHHhhh-CCceeEEEcCccCCCceeeec
Q 003314 544 CDIDVYQFKFFAELVKEQ-VGERDSVIIMTHEPNWLLD-WYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYV 620 (831)
Q Consensus 544 gdID~~Q~~wFe~ll~~~-v~~~d~VIL~tHeP~w~~~-~~~~~~t~~~l~~Lie~~L-~~RV~LvLAGHiHhYqR~~~~ 620 (831)
..++..|++||+++.... +.-++..|+++|.++-... .... .....+. +++.+ +.+++++++||+|.-.-. .
T Consensus 106 ~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~~~~~~~~--~~~~~~~-l~~~~~~~~~d~~i~GHtH~~~~~--~ 180 (270)
T 3qfm_A 106 EEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDKNWGRELI--HTGKQEE-FDRLVTHPPCDIAVYGHIHQQLLR--Y 180 (270)
T ss_dssp TTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTBSSSSTTS--TTCCHHH-HHHTTTTTTCSEEECCSSCSEEEE--E
T ss_pred HHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCCCCCCceec--CCCcHHH-HHHHhcccCCCEEEECCcCchHhe--e
Confidence 346788999999876421 2224566788887653321 1100 0111112 23333 458999999999952211 1
Q ss_pred CCCCCcccceEEEecCCCC
Q 003314 621 PSDGPVYVQHLLVNGCGGA 639 (831)
Q Consensus 621 ~~~G~~~~~~lIVsGGGGA 639 (831)
...| ..+|..|+-|.
T Consensus 181 ~~~~----~~~iNpGSvg~ 195 (270)
T 3qfm_A 181 GTGG----QLIVNPGSIGQ 195 (270)
T ss_dssp CTTS----CEEEEECCSSS
T ss_pred ccCC----EEEEECCCccC
Confidence 1112 25677777664
No 24
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=97.58 E-value=0.00022 Score=79.60 Aligned_cols=126 Identities=16% Similarity=0.113 Sum_probs=66.4
Q ss_pred EEEeCCCCCCCCChHHHHHHhhcc--ccCC-cccc-----CCCcceEEEEcCC-cEEEEEEecCCCCCC-----------
Q 003314 487 CYIIPGNHDWFDGLNTFMRFICHK--SWLG-GWFM-----PQKKSYFALQLPK-GWWVFGLDLALHCDI----------- 546 (831)
Q Consensus 487 vfAIPGNHDWyDGL~aFlr~F~~r--~~lg-GW~m-----pQ~~SYFAlrLp~-~wWLiGLDtql~gdI----------- 546 (831)
-++++||||+..|.+.+.+..-.. .+++ .... |.-.+|-.++... ..-++|+.+.....+
T Consensus 85 d~~~~GNHEfd~g~~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~~~~~~ 164 (516)
T 1hp1_A 85 DAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYFTDIEF 164 (516)
T ss_dssp CEEECCGGGGSSCHHHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSCTTEEE
T ss_pred CEEeeccccccCCHHHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCccCCcEE
Confidence 367899999988876655543211 1121 1110 1112465555542 367889876532111
Q ss_pred -CH-H-HHHHHHHHHHhhcCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCce
Q 003314 547 -DV-Y-QFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (831)
Q Consensus 547 -D~-~-Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYqR 616 (831)
|. + -.++++++ ++ .+..|.+|+++|.|............. -..+.+.+-+.+++++|+||+|....
T Consensus 165 ~d~~~~~~~~v~~l-~~-~~~~d~iI~l~H~g~~~~~~~~~~~~~--~~~la~~~~~~~iDlilgGHtH~~~~ 233 (516)
T 1hp1_A 165 RKPADEAKLVIQEL-QQ-TEKPDIIIAATHMGHYDNGEHGSNAPG--DVEMARALPAGSLAMIVGGHSQDPVC 233 (516)
T ss_dssp CCHHHHHHHHHHHH-HH-HTCCSEEEEEEESCCCGGGCCTTSCCC--HHHHHHHSCTTSSSEEECCSSCCBCC
T ss_pred eCHHHHHHHHHHHH-Hh-cCCCCEEEEEecCCccCCCcccccCch--HHHHHHhCCCCceeEEECCCCCcccc
Confidence 11 1 23444443 22 124579999999997543221111011 12333333245799999999998654
No 25
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=97.50 E-value=0.00075 Score=74.88 Aligned_cols=120 Identities=15% Similarity=0.167 Sum_probs=56.9
Q ss_pred CCeEEEeCCCCCCCCChH--HHHHHhhccc---cCCccccCCCcce--EEEEcCC-cEEEEEEecCCCCCCCHHH-HHHH
Q 003314 484 GPQCYIIPGNHDWFDGLN--TFMRFICHKS---WLGGWFMPQKKSY--FALQLPK-GWWVFGLDLALHCDIDVYQ-FKFF 554 (831)
Q Consensus 484 gP~vfAIPGNHDWyDGL~--aFlr~F~~r~---~lgGW~mpQ~~SY--FAlrLp~-~wWLiGLDtql~gdID~~Q-~~wF 554 (831)
+.++|+|+||||...|.. +.++.+.... ..+.+..+.+-.. ..++-+. ...|-|+. ++.+.. .+.+
T Consensus 120 gIpV~~I~GNHD~~~~~~~~s~~~lL~~~g~v~l~g~~~~~~~i~~~pv~l~~g~~~valyG~~-----~~~d~rl~r~~ 194 (417)
T 4fbw_A 120 AIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKGFTKLALYGIS-----NVRDERLYHSF 194 (417)
T ss_dssp SSCEEECCCGGGC-----CCCHHHHHHHTTSCEECCCCC---CEEECCEEEEETTEEEEEEEEC-----CCCHHHHHHHH
T ss_pred CCeEEEEecCCCCccccccccHHHHhccCCeEEEeCCcccCCceeEEeEEEEecCceEEEEecc-----CCchhhhhhhh
Confidence 344999999999977653 2344432211 1233322222111 1222222 24566663 333322 1333
Q ss_pred HH-HHH---hh-cCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCcee
Q 003314 555 AE-LVK---EQ-VGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (831)
Q Consensus 555 e~-ll~---~~-v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYqR~ 617 (831)
.+ .++ .. ..++..-|++.|.+....+. .+. +-+.+++..+++++.||+|..+..
T Consensus 195 ~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~--~~y-------ip~~l~~~~~DyvalGH~H~~~~~ 253 (417)
T 4fbw_A 195 RENKVKFLRPDLYRDEWFNLLTVHQNHSAHTP--TSY-------LPESFIQDFYDFVLWGHEHECLID 253 (417)
T ss_dssp HTTCEEEEEESTTTTTSEEEEEEESCSSCSSS--SSS-------CCGGGSCTTCSEEEEESCCSCEEE
T ss_pred hhhhhhhcCcccccCCceEEEEecCCccCCCC--ccc-------CchhHhhcCCCEEEecCcccccee
Confidence 33 111 10 12345789999998754321 110 013445678999999999986554
No 26
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=97.50 E-value=0.0004 Score=78.25 Aligned_cols=120 Identities=13% Similarity=0.122 Sum_probs=59.9
Q ss_pred CCeEEEeCCCCCCCCChHH--HHHHhhccc---cCCccccCCCcceE--EEEcCC-cEEEEEEecCCCCCCCHHH-HHHH
Q 003314 484 GPQCYIIPGNHDWFDGLNT--FMRFICHKS---WLGGWFMPQKKSYF--ALQLPK-GWWVFGLDLALHCDIDVYQ-FKFF 554 (831)
Q Consensus 484 gP~vfAIPGNHDWyDGL~a--Flr~F~~r~---~lgGW~mpQ~~SYF--AlrLp~-~wWLiGLDtql~gdID~~Q-~~wF 554 (831)
+.++|+|+||||...+... .++.+.... .++.+..+.+-... .++-+. ...|-|+. ++.+.. .+.+
T Consensus 183 gIpVf~I~GNHD~~~~~~~~s~~~LL~~~g~v~l~g~~~~~d~i~~~pv~l~kg~~~valyGl~-----y~~d~rl~r~~ 257 (472)
T 4fbk_A 183 AIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKGFTKLALYGIS-----NVRDERLYHSF 257 (472)
T ss_dssp SSCEEECCCCCCSCCC--CCCHHHHHHHTTSCEECCCCSCSSSEEECCEEEEETTEEEEEEECC-----CCCHHHHHHHH
T ss_pred CCcEEEEecCCCCccccccccHHHHhccCCcEEEeCCcccCCceeEEEEEEEeCCceEEEEecC-----CCchhhhhhhh
Confidence 3449999999999877542 455442211 12333322221111 222222 24455553 343322 1333
Q ss_pred HHHHHhhc-----CCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCcee
Q 003314 555 AELVKEQV-----GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (831)
Q Consensus 555 e~ll~~~v-----~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYqR~ 617 (831)
.+-..+.. .++..-|+++|.+....+. .+ .+-+++++..+++++.||+|..+..
T Consensus 258 ~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~--~~-------yipe~ll~~g~DyValGH~H~~~~~ 316 (472)
T 4fbk_A 258 RENKVKFLRPDLYRDEWFNLLTVHQNHSAHTP--TS-------YLPESFIQDFYDFVLWGHEHECLID 316 (472)
T ss_dssp HTTCEEEEEESTTGGGEEEEEEEESCSCCSST--TS-------SCCGGGSCTTCSEEEEESCCSCEEE
T ss_pred hhhhhhhhCcccccCCceEEEEecCCccCCCc--cc-------cCChhhhhcCCCEEEecCcccceee
Confidence 33111111 1233679999998754321 11 0113455678999999999986654
No 27
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=97.49 E-value=0.0013 Score=73.23 Aligned_cols=44 Identities=14% Similarity=0.049 Sum_probs=28.7
Q ss_pred CCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCcee
Q 003314 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (831)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYqR~ 617 (831)
+...|+++|.+....+ ... .+-+++++..+++++.||+|..+..
T Consensus 229 ~~~~Ilv~H~~~~~~g---~~~------~ip~~l~~~~~Dyv~lGH~H~~~~~ 272 (431)
T 3t1i_A 229 SWFNLFVIHQNRSKHG---STN------FIPEQFLDDFIDLVIWGHEHECKIA 272 (431)
T ss_dssp GEEEEEEECSCCSCSS---SSS------SCCGGGSCTTCCEEEECSCCSCEEE
T ss_pred CceEEEEECCCccCCC---ccc------cCCHhHhhCCCCEEEeccccccccc
Confidence 3478999999863211 111 1114455678999999999987654
No 28
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=97.40 E-value=8.6e-05 Score=74.76 Aligned_cols=61 Identities=10% Similarity=0.062 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCeEEEEecCCCCCcc-cccCccchhhHHHHHHhhhCCceeEEEcCccCC
Q 003314 545 DIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLD-WYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHH 613 (831)
Q Consensus 545 dID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~-~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHh 613 (831)
.++..|++||+++... ...+ .|+++|.+..... .+.. ....+..+++ +.+++++++||+|.
T Consensus 92 ~l~~~~~~~L~~lp~~-~~~~--~i~~~Hg~p~~~~~~~~~--~~~~~~~~l~---~~~~~l~i~GHtH~ 153 (246)
T 3rqz_A 92 QLQAEHLQYLESLPNR-MIDG--DWTVVHGSPRHPIWEYIY--NARIAALNFP---AFDTPLCFVGHTHV 153 (246)
T ss_dssp HCCHHHHHHHHHCCSE-EEET--TEEEESSCSSSTTTCCCC--SHHHHHHHGG---GCCSSEEECCSSSS
T ss_pred HcCHHHHHHHHhCCcE-EEEC--CEEEEECCcCCccccccC--ChHHHHHHHh---ccCCCEEEECCcCc
Confidence 3567899999986532 2222 4788898876542 1111 1122222222 46899999999996
No 29
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=97.28 E-value=0.0011 Score=74.97 Aligned_cols=114 Identities=11% Similarity=0.077 Sum_probs=63.5
Q ss_pred EEEeCCCCCCCCChHHHHHHhhccc--cCC-ccccCC-------CcceEEEEcCC-cEEEEEEecCCC------C-CC--
Q 003314 487 CYIIPGNHDWFDGLNTFMRFICHKS--WLG-GWFMPQ-------KKSYFALQLPK-GWWVFGLDLALH------C-DI-- 546 (831)
Q Consensus 487 vfAIPGNHDWyDGL~aFlr~F~~r~--~lg-GW~mpQ-------~~SYFAlrLp~-~wWLiGLDtql~------g-dI-- 546 (831)
-++++||||+..|.+.+.+.+-+.. ++. .....+ -..|..++... ..-++|+.+... + .+
T Consensus 109 d~~~lGNHEfd~g~~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~~~ 188 (552)
T 2z1a_A 109 RAMALGNHEFDLGPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNPGPTVAF 188 (552)
T ss_dssp CEEECCGGGGTTCHHHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHSCCCTTCEE
T ss_pred CccccccccccCCHHHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhhccCCCCCcEE
Confidence 3678999999888777766653211 122 221110 12465666543 377889976421 1 11
Q ss_pred -CH-HHHHHHHHHHHhhcCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCce
Q 003314 547 -DV-YQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMR 616 (831)
Q Consensus 547 -D~-~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYqR 616 (831)
|. ++.+-..+.+++ +..|.+|+++|.|.-. + ..+.+++ ..|+++|+||+|....
T Consensus 189 ~d~~~~~~~~v~~l~~--~~~d~iIvL~H~g~~~----------d--~~la~~~--~gvDlIlgGHtH~~~~ 244 (552)
T 2z1a_A 189 LDPYESAQKAVYELLA--KGVNKIVVLSHLGYGE----------D--LKLARRL--VGVQVIVGGHSHTLLG 244 (552)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCCEEEEEESCHHH----------H--HHHHTTC--SSCCEEEECSSCCCBS
T ss_pred CCHHHHHHHHHHHHHh--cCCCEEEEEeCCCcch----------H--HHHHHhC--CCccEEEeCCcCcccc
Confidence 22 233322233332 2457999999999521 0 1222222 4699999999998654
No 30
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=97.08 E-value=0.00047 Score=67.15 Aligned_cols=40 Identities=15% Similarity=0.089 Sum_probs=24.2
Q ss_pred CeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCc
Q 003314 566 DSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (831)
Q Consensus 566 d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYq 615 (831)
+..|+++|..... ......+.+.+..+++++++||+|...
T Consensus 102 g~~i~l~HG~~~~----------~~~~~~~~~~~~~~~d~vi~GHtH~~~ 141 (178)
T 2kkn_A 102 GVTIGMCHGWGAP----------WDLKDRLLKVFNEKPQVILFGHTHEPE 141 (178)
T ss_dssp TEEEEECCSCCCH----------HHHHHHHHHHSSSCCSEEECCSCSSCC
T ss_pred CEEEEEECCCCCC----------CCHHHHHHHHhccCCCEEEECccCCCC
Confidence 3568888864320 111222333345689999999999654
No 31
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=96.99 E-value=0.005 Score=70.26 Aligned_cols=112 Identities=13% Similarity=0.154 Sum_probs=60.1
Q ss_pred EEEeCCCCCCCCChHHHHHHhhcc--ccCC-ccc-----cCCCcceEEEEcCC-cEEEEEEecCCC---------CC---
Q 003314 487 CYIIPGNHDWFDGLNTFMRFICHK--SWLG-GWF-----MPQKKSYFALQLPK-GWWVFGLDLALH---------CD--- 545 (831)
Q Consensus 487 vfAIPGNHDWyDGL~aFlr~F~~r--~~lg-GW~-----mpQ~~SYFAlrLp~-~wWLiGLDtql~---------gd--- 545 (831)
+. + ||||+..|.+.+.+..-.- .++. ... .|.-.+|-.++... ..-++|+.+... .+
T Consensus 159 ~~-~-GNHEfd~G~~~l~~~l~~~~~p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~ 236 (562)
T 2wdc_A 159 HM-V-SHWEWTLGRERVEELLGLFRGEFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSF 236 (562)
T ss_dssp EE-C-CSGGGGGCHHHHHHHHHHCCSEECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEEC
T ss_pred EE-e-cchhcccCHHHHHHHHHhCCCCEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEE
Confidence 54 6 9999877777666654321 1222 211 12122465555542 367888875321 01
Q ss_pred CC-HHH-HHHHHHHHHhhcCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCcee
Q 003314 546 ID-VYQ-FKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYMRH 617 (831)
Q Consensus 546 ID-~~Q-~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYqR~ 617 (831)
.| .++ .+++++ +++ +..|.||+++|.|.-. + ..+.+++ ..++++|+||+|....+
T Consensus 237 ~~~~~~~~~~v~~-l~~--~~~d~iIvLsH~g~~~----------d--~~la~~~--~giDlIlgGHtH~~~~~ 293 (562)
T 2wdc_A 237 ALDERRLQEAVDK-ARA--EGANAVVLLSHNGMQL----------D--AALAERI--RGIDLILSGHTHDLTPR 293 (562)
T ss_dssp CCCHHHHHHHHHH-HHH--TTCSEEEEEECSCHHH----------H--HHHHTTS--SSCCEEEECSSCCCCSS
T ss_pred eCHHHHHHHHHHH-HHH--CCCCEEEEEeCCCCcc----------h--HHHHhcC--CCCcEEEeCCCCCCCcc
Confidence 11 122 234433 222 2457999999999521 0 1222332 46999999999986543
No 32
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=96.63 E-value=0.023 Score=63.82 Aligned_cols=127 Identities=16% Similarity=0.173 Sum_probs=63.0
Q ss_pred EEeCCCCCCCCChHHHHHHhhcc--ccCCc-cc---cCC-CcceEEEEcCC-cEEEEEEecCCCCCCCH----------H
Q 003314 488 YIIPGNHDWFDGLNTFMRFICHK--SWLGG-WF---MPQ-KKSYFALQLPK-GWWVFGLDLALHCDIDV----------Y 549 (831)
Q Consensus 488 fAIPGNHDWyDGL~aFlr~F~~r--~~lgG-W~---mpQ-~~SYFAlrLp~-~wWLiGLDtql~gdID~----------~ 549 (831)
.+++||||+-.|.+.+.+.+-+. .+++. .. .|. ..+|-.++... ..=++|+.+.....+.. .
T Consensus 104 ~~t~GNHefd~G~~~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~~~~~~~~g~~~~d 183 (527)
T 3qfk_A 104 FGTLGNHEFNYGLPYLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHWEQPEHIQSLTFHS 183 (527)
T ss_dssp EECCCGGGGTTCHHHHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGTSCHHHHTTEEECC
T ss_pred EEeccccccccCHHHHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccccCccccCCcEEcC
Confidence 45799999888877777665322 12211 11 011 12465555432 25678887643211111 1
Q ss_pred HHHHHHHHHHhhcCCCCeEEEEecCCCCCcccccCcc----chhh-HHHHHHhhhCCceeEEEcCccCCCce
Q 003314 550 QFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNV----SGKN-VKHLICDYLKGRCKLRIAGDMHHYMR 616 (831)
Q Consensus 550 Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~----t~~~-l~~Lie~~L~~RV~LvLAGHiHhYqR 616 (831)
..+-.++.+++-.+.-|-||+++|.+.-. +...... ++++ ...+.+++ ..+++++|+||+|....
T Consensus 184 ~~~~~~~~v~~l~~~~D~iIvl~H~G~~~-d~~~~~~~~~~~~e~~~~~la~~~-~~giDlIlgGHtH~~~~ 253 (527)
T 3qfk_A 184 AFEILQQYLPEMKRHADIIVVCYHGGFEK-DLESGTPTEVLTGENEGYAMLEAF-SKDIDIFITGHQHRQIA 253 (527)
T ss_dssp HHHHHHHHHHHHHHHCSEEEEEEECCCSB-CTTTCCBSSCCSSSCCHHHHHHHH-GGGCSEEECCSSCCEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCcCccc-ccccCccccccccchHHHHHHHhc-CCCCcEEEECCCCcccc
Confidence 12233333221112246899999976422 1110000 1222 23443433 35799999999997543
No 33
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=96.48 E-value=0.025 Score=63.36 Aligned_cols=130 Identities=16% Similarity=0.144 Sum_probs=61.5
Q ss_pred CCeEEEeCCCCCCCCChHHHHHHhhccc--cC-Ccc-----ccCC-CcceEEEEcCC-cEEEEEEecC-------CC---
Q 003314 484 GPQCYIIPGNHDWFDGLNTFMRFICHKS--WL-GGW-----FMPQ-KKSYFALQLPK-GWWVFGLDLA-------LH--- 543 (831)
Q Consensus 484 gP~vfAIPGNHDWyDGL~aFlr~F~~r~--~l-gGW-----~mpQ-~~SYFAlrLp~-~wWLiGLDtq-------l~--- 543 (831)
++ -++++||||+..|.+.+.+.+-+.. ++ +.. ..|. ..+|-.++... ..-++|+-+. ..
T Consensus 85 g~-D~~tlGNHEfd~G~~~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~~~~~~ 163 (509)
T 3ive_A 85 PF-DAVTIGNHEFDHGWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSAATR 163 (509)
T ss_dssp CC-SEECCCGGGGTTCHHHHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHHHSCGGGC
T ss_pred CC-cEEeecccccccCHHHHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcccccccccccC
Confidence 35 3557899998888877777653321 22 111 1122 23465555542 2567788321 10
Q ss_pred CCCC-HHHHHHHHHHHHhhcCCCCeEEEEecCCCCCcccccCc-c--chhhH-HHHHHhhhCCceeEEEcCccCCCce
Q 003314 544 CDID-VYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNN-V--SGKNV-KHLICDYLKGRCKLRIAGDMHHYMR 616 (831)
Q Consensus 544 gdID-~~Q~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~-~--t~~~l-~~Lie~~L~~RV~LvLAGHiHhYqR 616 (831)
..+. ....+-.++.+++-.+.-|-||+++|.+.=........ + .+.+. ..+.+++ . .++++|+||+|....
T Consensus 164 ~g~~~~d~~~~~~~~v~~Lk~~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d~~la~~~-~-giDlIlgGHtH~~~~ 239 (509)
T 3ive_A 164 VGIEARDEIKWLQRYIDELKGKVDLTVALIHEGVPARQSSMGGTDVRRALDKDIQTASQV-K-GLDILITGHAHVGTP 239 (509)
T ss_dssp TTEEECCHHHHHHHHHHHHTTTCSEEEEEEECSSCCCCCCC---CCCCCCHHHHHHHHHC-S-SCCEEEEESSCCCCS
T ss_pred CCCEEcCHHHHHHHHHHHHHhcCCEEEEEeccCcCCccccccccccccccchHHHHHhcC-C-CCcEEEeCCcCccCC
Confidence 1110 01122333332211122568999999873111100000 0 01112 2333333 3 499999999997543
No 34
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=95.87 E-value=0.015 Score=65.75 Aligned_cols=114 Identities=11% Similarity=0.129 Sum_probs=58.2
Q ss_pred EEeCCCCCCCCChHHHH-HHhhccc--cCC-ccc-----cC----CCcceEEEEcCC-cEEEEEEecCCC------C-CC
Q 003314 488 YIIPGNHDWFDGLNTFM-RFICHKS--WLG-GWF-----MP----QKKSYFALQLPK-GWWVFGLDLALH------C-DI 546 (831)
Q Consensus 488 fAIPGNHDWyDGL~aFl-r~F~~r~--~lg-GW~-----mp----Q~~SYFAlrLp~-~wWLiGLDtql~------g-dI 546 (831)
++++||||+..|.+.+. +.+-+-. +++ ... .| .-.+|..++... ..=++|+.+... + .+
T Consensus 109 ~~~~GNHEfd~g~~~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~~~~~~ 188 (546)
T 4h2g_A 109 AMALGNHEFDNGVEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETPFLSNPGTNL 188 (546)
T ss_dssp EEECCGGGGTTHHHHHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEECTTHHHHSCCCSSE
T ss_pred EEeccCcccccCHHHHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEecccccccccCCCCCc
Confidence 56799999977777666 5432211 121 111 01 112465555542 255778865321 1 11
Q ss_pred C-HHHHHHHHHHHHhh-cCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCc
Q 003314 547 D-VYQFKFFAELVKEQ-VGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (831)
Q Consensus 547 D-~~Q~~wFe~ll~~~-v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYq 615 (831)
. ....+-.++.+++- -+.-|-||+++|.|.-. -..+.+++ ..++++|+||+|...
T Consensus 189 ~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~------------d~~la~~~--~giDlIlgGHtH~~~ 245 (546)
T 4h2g_A 189 VFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM------------DKLIAQKV--RGVDVVVGGHSNTFL 245 (546)
T ss_dssp EECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH------------HHHHHHHS--TTCCEEECCSSCCCC
T ss_pred EEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc------------hHHHHHhC--CCCcEEEeCCcCccc
Confidence 0 01122233332210 12247999999988411 11232333 459999999999854
No 35
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=94.75 E-value=0.35 Score=55.21 Aligned_cols=114 Identities=15% Similarity=0.202 Sum_probs=57.2
Q ss_pred EEeCCCCCCCCChHHHHHHhhccc--cC-Cccc-----cC--CCcceEEEEcCC-cEEEEEEec-C-------CCCCCC-
Q 003314 488 YIIPGNHDWFDGLNTFMRFICHKS--WL-GGWF-----MP--QKKSYFALQLPK-GWWVFGLDL-A-------LHCDID- 547 (831)
Q Consensus 488 fAIPGNHDWyDGL~aFlr~F~~r~--~l-gGW~-----mp--Q~~SYFAlrLp~-~wWLiGLDt-q-------l~gdID- 547 (831)
++++||||+-.|.+.+.+.+-.-. ++ ++.. .+ .-.+|-.++... ..=++|+.+ . ....+.
T Consensus 97 ~~tlGNHEfd~G~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~~~~~~~~~~p~~~~~f 176 (579)
T 3ztv_A 97 YFTLGNHEFDAGNEGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTVNKTVNSSSPGKDVKF 176 (579)
T ss_dssp EEECCSGGGTTHHHHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEECSHHHHHHSCCCTTEEE
T ss_pred eeeccccccccCHHHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEcCCccccccCCCCCceE
Confidence 367899998777666666543211 11 1111 01 112465555542 256788844 1 111110
Q ss_pred HHHHHHHHHHHHhhc-CCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCc
Q 003314 548 VYQFKFFAELVKEQV-GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (831)
Q Consensus 548 ~~Q~~wFe~ll~~~v-~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYq 615 (831)
....+-.++.+++-. +.-|-||+++|.+.- . -..+.+++ ..++++|+||+|...
T Consensus 177 ~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~----------~--d~~la~~~--~giDlIlgGHtH~~~ 231 (579)
T 3ztv_A 177 YDEIATAQIMANALKQQGINKIILLSHAGSE----------K--NIEIAQKV--NDIDVIVTGDSHYLY 231 (579)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCEEEEEETCHH----------H--HHHHHHHC--SSCCEEEECSSCCEE
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEEeccCch----------h--hHHHHHhC--CCCCEEEeCCCCccc
Confidence 011222333332111 224689999998731 0 11232333 359999999999865
No 36
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=94.71 E-value=0.27 Score=56.28 Aligned_cols=118 Identities=19% Similarity=0.210 Sum_probs=62.2
Q ss_pred EEeCCCCCCCCChH---HHHHHhhc--cccCC-ccc---c-----CCCcceEEEEcC-C--cEEEEEEecCCCCC-----
Q 003314 488 YIIPGNHDWFDGLN---TFMRFICH--KSWLG-GWF---M-----PQKKSYFALQLP-K--GWWVFGLDLALHCD----- 545 (831)
Q Consensus 488 fAIPGNHDWyDGL~---aFlr~F~~--r~~lg-GW~---m-----pQ~~SYFAlrLp-~--~wWLiGLDtql~gd----- 545 (831)
.+.+||||+..|.+ .+.+.+-+ -.+++ +.. . |.-..|-.++.+ + ..-++|+.+.....
T Consensus 98 a~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt~~~~~~~~~~~ 177 (557)
T 3c9f_A 98 LLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDFKRFNSGTR 177 (557)
T ss_dssp EECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCCCCCCTTEE
T ss_pred EEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEeecCCCCCCCCcE
Confidence 45789999987765 34333321 11222 211 0 112347667763 2 37788887653221
Q ss_pred -CCHHH---HHHHHHHHHhhcCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCcee-EEEcCccCCC
Q 003314 546 -IDVYQ---FKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCK-LRIAGDMHHY 614 (831)
Q Consensus 546 -ID~~Q---~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~-LvLAGHiHhY 614 (831)
.|..+ .+|+.++.+ +.-|-||+++|.+.--.. ++ .......+.+.+ ..++ ++|+||.|..
T Consensus 178 ~~d~~e~i~~~~v~~l~~---~~~D~IIvL~H~G~~~~~----d~-~~~~~~~lA~~~-~giDilIlgGHtH~~ 242 (557)
T 3c9f_A 178 VTPMAETIHEPWFQEALK---HEVDLIIIVGHTPISHNW----GE-FYQVHQYLRQFF-PDTIIQYFGGHSHIR 242 (557)
T ss_dssp ECCHHHHTTSHHHHHHTT---SCCSEEEEECSSCCCTTT----CH-HHHHHHHHHHHC-TTSEEEEEECSSCCE
T ss_pred ECCHHHHHHHHHHHHHHh---cCCCEEEEecccCccccC----cc-ccHHHHHHHHhC-CCCCEEEECCCCCCC
Confidence 13322 247766543 245799999999862000 11 111212223322 4688 5999999986
No 37
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=92.27 E-value=0.42 Score=51.31 Aligned_cols=46 Identities=20% Similarity=0.136 Sum_probs=27.1
Q ss_pred CCeEEEEecCCCCCcccccCccchhh-HHHHHHhhhCCceeEEEcCccCCCc
Q 003314 565 RDSVIIMTHEPNWLLDWYFNNVSGKN-VKHLICDYLKGRCKLRIAGDMHHYM 615 (831)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~-l~~Lie~~L~~RV~LvLAGHiHhYq 615 (831)
-|-||+++|-..- .+... ...++ ...+.+++ ..++++|+||.|...
T Consensus 208 ~D~II~l~H~G~~-~d~~~--~~~e~~~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 208 ADVIIALAHTGIE-KQAQS--SGAENAVFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp CSEEEEEECCCCC-SSCCC--TTCSSCHHHHHHHC--SCCCEEEECSSCCEE
T ss_pred CCEEEEEeccCcc-ccccc--cccchhHHHHHhcC--CCCcEEEECCCCccC
Confidence 4689999998652 22111 11122 22333343 469999999999753
No 38
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=92.07 E-value=0.76 Score=49.39 Aligned_cols=46 Identities=17% Similarity=0.218 Sum_probs=27.6
Q ss_pred CCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCc
Q 003314 565 RDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (831)
Q Consensus 565 ~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYq 615 (831)
-|-||+++|--. ..+.. ....++...++++. ..++++|+||.|...
T Consensus 202 ~D~II~l~H~G~-~~d~~--~~~~en~~~~~~~v--~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 202 ADVVVVVAHSGL-SADPY--QAMAENSVYYLSQV--PGVDAIMFGHAHAVF 247 (339)
T ss_dssp CSEEEEEECCCC-CCSCC--CTTCSCCHHHHTTS--TTCCEEEECSSCSEE
T ss_pred CCEEEEEeccCc-ccccc--ccccchhHHHHhhC--CCCCEEEeCCCcccc
Confidence 468888898865 22211 11123333334443 469999999999753
No 39
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=89.61 E-value=0.17 Score=50.03 Aligned_cols=41 Identities=22% Similarity=0.225 Sum_probs=24.5
Q ss_pred eEEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccEEEEcccccCCC
Q 003314 382 LWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPN 436 (831)
Q Consensus 382 ~wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~ 436 (831)
+.+.+++|+= |. .....+++++-. ..++|+++++||++.-+
T Consensus 26 mki~~iSD~H-~~--~~~l~~~l~~~~-----------~~~~d~vi~~GDl~~~g 66 (208)
T 1su1_A 26 MKLMFASDIH-GS--LPATERVLELFA-----------QSGAQWLVILGDVLNHG 66 (208)
T ss_dssp CEEEEECCCT-TB--HHHHHHHHHHHH-----------HHTCSEEEECSCCSCCC
T ss_pred EEEEEEEcCC-CC--HHHHHHHHHHHH-----------hcCCCEEEECCCccccC
Confidence 6899999994 21 122333332210 12479999999988643
No 40
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=88.43 E-value=3.7 Score=42.77 Aligned_cols=113 Identities=16% Similarity=0.197 Sum_probs=58.4
Q ss_pred CeEEEeCCCCCCCCC-hHHHHHHhh-ccccCCccc---cCCCcceEEEEcCC-cEEEEEEecCC-CCCCCHHHHHHHHHH
Q 003314 485 PQCYIIPGNHDWFDG-LNTFMRFIC-HKSWLGGWF---MPQKKSYFALQLPK-GWWVFGLDLAL-HCDIDVYQFKFFAEL 557 (831)
Q Consensus 485 P~vfAIPGNHDWyDG-L~aFlr~F~-~r~~lgGW~---mpQ~~SYFAlrLp~-~wWLiGLDtql-~gdID~~Q~~wFe~l 557 (831)
..+.. .|||+|=.+ +..|++..- ..-..+.+. .|. +.|--++... ..=++++-++. ....+.| .+-.+++
T Consensus 58 ~Da~T-lGNHefD~~~l~~~l~~~~~~~~~~aN~~~~~~pg-~g~~I~~~~G~kIgVigl~g~~~~~~~~~p-~~~~~~~ 134 (255)
T 1t70_A 58 AGCLT-LGNHAWHHKDIYPMLSEDTYPIVRPLNYADPGTPG-VGWRTFDVNGEKLTVVNLLGRVFMEAVDNP-FRTMDAL 134 (255)
T ss_dssp CSEEE-CCTTTTSSTTHHHHHHTTCSCEECCSCCCCTTCSS-CSEEEEECSSSEEEEEEEECCTTSCCCSCH-HHHHHHH
T ss_pred CCEEE-eccccccCchHHHHHhhCCCcEEEEeccCCCCCCC-CCeEEEEECCEEEEEEEeecCcCcccccCH-HHHHHHH
Confidence 33444 599999654 333333211 000012222 232 2565666632 24456665442 1134444 3345566
Q ss_pred HHhhcCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCC
Q 003314 558 VKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (831)
Q Consensus 558 l~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhY 614 (831)
++ ++ .-|-+|+.+|- + .+.++ ..+-.++.++|++++.||+|-.
T Consensus 135 v~-~l-~~d~IIv~~H~-----e-----~t~Ek--~~la~~~dg~vd~VvGgHTHv~ 177 (255)
T 1t70_A 135 LE-RD-DLGTVFVDFHA-----E-----ATSEK--EAMGWHLAGRVAAVIGTHTHVP 177 (255)
T ss_dssp TT-CS-SCCEEEEEEEC-----S-----CHHHH--HHHHHHHTTSSSEEEEESSCSC
T ss_pred HH-Hh-CCCEEEEEeCC-----C-----ChHHH--HHHHHhCCCCeEEEEeCCCCcC
Confidence 64 34 45788999993 1 11121 1134455789999999999953
No 41
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=88.24 E-value=6.4 Score=41.60 Aligned_cols=112 Identities=18% Similarity=0.195 Sum_probs=57.6
Q ss_pred CeEEEeCCCCCCCCChHHHHHHhhccc--cCCcc--cc----CCCcceEEEEcCC-cEEEEEEecCC--CC-CCCHHHHH
Q 003314 485 PQCYIIPGNHDWFDGLNTFMRFICHKS--WLGGW--FM----PQKKSYFALQLPK-GWWVFGLDLAL--HC-DIDVYQFK 552 (831)
Q Consensus 485 P~vfAIPGNHDWyDGL~aFlr~F~~r~--~lgGW--~m----pQ~~SYFAlrLp~-~wWLiGLDtql--~g-dID~~Q~~ 552 (831)
..+. ..|||+|=.|. ..+.++-... ....+ .. |. +.|--++... ..=++++-.+. .. .+|.+ .+
T Consensus 64 ~Da~-TlGNHefD~g~-~~~~~l~~~~~v~~aN~p~~~~~~~~g-~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~p-f~ 139 (281)
T 1t71_A 64 VNYI-TMGNHTWFQKL-DLAVVINKKDLVRPLNLDTSFAFHNLG-QGSLVFEFNKAKIRITNLLGTSVPLPFKTTNP-FK 139 (281)
T ss_dssp CCEE-ECCTTTTCCGG-GHHHHTTCTTEECBSCBCTTSTTTTSS-BSEEEEECSSCEEEEEEEECTTSCCSSCBCCH-HH
T ss_pred CCEE-EEccCcccCCc-cHHHHhhhcCEEeeccCCcccccccCC-CCeEEEEECCEEEEEEEeeccccccCccccCH-HH
Confidence 3344 45999997773 2333322110 01111 11 22 2465666632 24456665442 11 34444 44
Q ss_pred HHHHHHHhhcCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCC
Q 003314 553 FFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (831)
Q Consensus 553 wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhY 614 (831)
-.+++++ + +.-|-||+..|.= .+.+. ..+...+.++|++++.||+|-.
T Consensus 140 ~a~~~v~-~-~~~diIIv~~H~g----------~t~Ek--~~la~~~dg~VD~VvGgHTHv~ 187 (281)
T 1t71_A 140 VLKELIL-K-RDCDLHIVDFHAE----------TTSEK--NAFCMAFDGYVTTIFGTHTHVP 187 (281)
T ss_dssp HHHHHHT-T-CCCSEEEEEEECS----------CHHHH--HHHHHHHTTTSSEEEEESSSSC
T ss_pred HHHHHHh-h-cCCCEEEEEeCCC----------chHHH--HHHHHhCCCCeEEEEeCCCCcC
Confidence 4555554 2 3346888888841 11111 1234455789999999999964
No 42
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=88.11 E-value=0.19 Score=49.39 Aligned_cols=47 Identities=17% Similarity=0.066 Sum_probs=27.6
Q ss_pred CCCeEEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCC
Q 003314 379 KEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPS 438 (831)
Q Consensus 379 ~~~~wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs 438 (831)
.....+.+++|+= | + .....+++.+-. ..++.|.++++||++--++.
T Consensus 10 ~~~~~i~visDiH-g-~-~~~l~~~l~~~~----------~~~~~d~~i~~GD~~~~g~~ 56 (221)
T 1g5b_A 10 SKYRNIWVVGDLH-G-C-YTNLMNKLDTIG----------FDNKKDLLISVGDLVDRGAE 56 (221)
T ss_dssp GGCSCEEEECCCT-T-C-HHHHHHHHHHHT----------CCTTTCEEEECSCCSSSSSC
T ss_pred CCCceEEEEEcCC-C-C-HHHHHHHHHHcc----------CCCCCCEEEEeCCccCCCCC
Confidence 3456788999984 2 1 123444443210 01357899999998765443
No 43
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=87.83 E-value=7.3 Score=40.63 Aligned_cols=112 Identities=17% Similarity=0.210 Sum_probs=59.1
Q ss_pred CeEEEeCCCCCCCCC-hHHHHHHh--hccccCCccccCCCcceEEEEcCC-cEEEEEEecCCCC-CCCHHHHHHHHHHHH
Q 003314 485 PQCYIIPGNHDWFDG-LNTFMRFI--CHKSWLGGWFMPQKKSYFALQLPK-GWWVFGLDLALHC-DIDVYQFKFFAELVK 559 (831)
Q Consensus 485 P~vfAIPGNHDWyDG-L~aFlr~F--~~r~~lgGW~mpQ~~SYFAlrLp~-~wWLiGLDtql~g-dID~~Q~~wFe~ll~ 559 (831)
..+. ..|||+|=.+ +..|++-. .....+. -..|. +.|..++... ..=++++-....- ..|.| .+-.+++++
T Consensus 58 ~D~~-T~GNHefD~~~l~~~l~~~~~vrpaN~~-~~~pg-~~~~i~~~~G~kIgVi~l~g~~~~~~~~~p-f~~~~~~v~ 133 (252)
T 2z06_A 58 VDLV-SLGNHAWDHKEVYALLESEPVVRPLNYP-PGTPG-KGFWRLEVGGESLLFVQVMGRIFMDPLDDP-FRALDRLLE 133 (252)
T ss_dssp CCEE-ECCTTTTSCTTHHHHHHHSSEECCTTSC-SSCSS-CSEEEEEETTEEEEEEEEECCTTSCCCCCH-HHHHHHHHH
T ss_pred CCEE-EeccEeeECchHHHHhccCCceEeecCC-CCCCC-CCeEEEEECCEEEEEEEcccccCccccCCH-HHHHHHHHH
Confidence 4455 5699999665 33444321 1111111 11332 3566666643 1334454433211 34555 334566665
Q ss_pred hhcCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCC
Q 003314 560 EQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHY 614 (831)
Q Consensus 560 ~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhY 614 (831)
++. -|-+|+.+|-= +. . ....+..++.+||++++.||+|-.
T Consensus 134 -~lk-~d~IIv~~H~g-~t---------s--ek~~la~~~dg~Vd~VvGgHTHv~ 174 (252)
T 2z06_A 134 -EEK-ADYVLVEVHAE-AT---------S--EKMALAHYLDGRASAVLGTHTHVP 174 (252)
T ss_dssp -HCC-CSEEEEEEECS-CH---------H--HHHHHHHHHBTTBSEEEEESSCSC
T ss_pred -HhC-CCEEEEEeCCC-cH---------H--HHHHHHHhCCCCeEEEEcCCCCcC
Confidence 344 67888888841 11 1 112234456789999999999964
No 44
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=83.48 E-value=2.6 Score=47.25 Aligned_cols=111 Identities=13% Similarity=0.140 Sum_probs=57.3
Q ss_pred EEeCCCCCCCCChHHHHHHhhccc---cC-Cccc---------cCCCcceEEEEcCC-cEEEEEEecCC-------CCCC
Q 003314 488 YIIPGNHDWFDGLNTFMRFICHKS---WL-GGWF---------MPQKKSYFALQLPK-GWWVFGLDLAL-------HCDI 546 (831)
Q Consensus 488 fAIPGNHDWyDGL~aFlr~F~~r~---~l-gGW~---------mpQ~~SYFAlrLp~-~wWLiGLDtql-------~gdI 546 (831)
.+.+||||+=.|++.+++.+.+.. ++ +... .+.-.+|--++... ..=++|+-+.. ..++
T Consensus 87 a~~lGNHEFd~G~~~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt~~~~~~~~~~~~~ 166 (530)
T 4h1s_A 87 AMALGNHEFDNGVEGLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETPFLSNPGTNL 166 (530)
T ss_dssp EEECCGGGGTTTTHHHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEECTTHHHHSCCCTTE
T ss_pred EEEEchhhhccCHHHHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccccceeeeccCCCCc
Confidence 458999999888888776443222 11 1111 01112465555543 13466765431 1111
Q ss_pred ---CH-HH-HHHHHHHHHhhcCCCCeEEEEecCCCCCcccccCccchhhHHHHHHhhhCCceeEEEcCccCCCc
Q 003314 547 ---DV-YQ-FKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIAGDMHHYM 615 (831)
Q Consensus 547 ---D~-~Q-~~wFe~ll~~~v~~~d~VIL~tHeP~w~~~~~~~~~t~~~l~~Lie~~L~~RV~LvLAGHiHhYq 615 (831)
|. +. .++..+ +++ +.-|-||+++|.-. ++-..+.+++ ..++++++||.|.+-
T Consensus 167 ~f~d~v~~~~~~v~~-Lr~--~g~D~II~LsH~G~------------~~d~~la~~v--~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 167 VFEDEITALQPEVDK-LKT--LNVNKIIALGHSGF------------EMDKLIAQKV--RGVDVVVGGHSNTFL 223 (530)
T ss_dssp EECCHHHHHHHHHHH-HHH--TTCCCEEEEEESCH------------HHHHHHHHHS--TTCCEEECCSSCCCB
T ss_pred ccCcHHHHHHHHHhh-hhh--cCCCEEEEeccCCc------------hHHHHHHhcC--CCCCeeccCCcccee
Confidence 22 12 233333 332 23468999999642 1111222332 469999999999753
No 45
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=63.95 E-value=1.5 Score=44.80 Aligned_cols=42 Identities=24% Similarity=0.260 Sum_probs=24.7
Q ss_pred EEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCC
Q 003314 383 WFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNP 437 (831)
Q Consensus 383 wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~g 437 (831)
.+.+++|+= | + .....+++.+-. ..+..|.+|++||++--++
T Consensus 20 ~i~visDiH-g-~-~~~l~~~l~~~~----------~~~~~d~ii~~GD~vd~g~ 61 (262)
T 2qjc_A 20 RVIIVGDIH-G-C-RAQLEDLLRAVS----------FKQGSDTLVAVGDLVNKGP 61 (262)
T ss_dssp CEEEECCCT-T-C-HHHHHHHHHHHT----------CCTTTSEEEECSCCSSSSS
T ss_pred eEEEEeCCC-C-C-HHHHHHHHHHHh----------ccCCCCEEEEecCCCCCCC
Confidence 688999994 3 1 123444443211 0122489999999876544
No 46
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=57.66 E-value=3.8 Score=42.71 Aligned_cols=17 Identities=41% Similarity=0.696 Sum_probs=12.8
Q ss_pred CCccEEEEcccccCCCC
Q 003314 421 PRGDVLLIGGDLAYPNP 437 (831)
Q Consensus 421 PrgdfLVlgGDlvYP~g 437 (831)
|..|.++++||++--++
T Consensus 27 ~~~d~~v~lGD~vdrG~ 43 (280)
T 2dfj_A 27 PGKDTLWLTGDLVARGP 43 (280)
T ss_dssp TTTCEEEECSCCSSSSS
T ss_pred CCCCEEEEeCCcCCCCC
Confidence 45789999999775444
No 47
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=38.81 E-value=9.8 Score=40.54 Aligned_cols=53 Identities=15% Similarity=0.062 Sum_probs=27.3
Q ss_pred CCeEEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCC
Q 003314 380 EDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPS 438 (831)
Q Consensus 380 ~~~wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs 438 (831)
....+.++||+= |. -+...+++..-.. . +.+..-....|.+|++||++--++.
T Consensus 69 ~~~~i~vigDiH-G~--~~~l~~ll~~~~~-~--~~~~~~~~~~d~~v~lGD~vdrG~~ 121 (342)
T 2z72_A 69 GIKKVVALSDVH-GQ--YDVLLTLLKKQKI-I--DSDGNWAFGEGHMVMTGDIFDRGHQ 121 (342)
T ss_dssp CCCEEEEECCCT-TC--HHHHHHHHHHTTS-B--CTTSCBCCTTCEEEECSCCSSSSSC
T ss_pred CCCCEEEEECCC-CC--HHHHHHHHHhcCC-C--cccccccCCCCEEEEECCCcCCCCC
Confidence 346788999983 21 1344454442110 0 0000111246889999997754443
No 48
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=38.45 E-value=26 Score=38.36 Aligned_cols=19 Identities=5% Similarity=-0.136 Sum_probs=14.1
Q ss_pred CCceeEEEcCccCCCceee
Q 003314 600 KGRCKLRIAGDMHHYMRHS 618 (831)
Q Consensus 600 ~~RV~LvLAGHiHhYqR~~ 618 (831)
+.++++++.||.+--.-|+
T Consensus 395 ~~~~~~iir~H~~~~~g~~ 413 (477)
T 1wao_1 395 ENNLDYIIRSHEVKAEGYE 413 (477)
T ss_dssp HTTCCEEEECCSCCTEEEE
T ss_pred HcCCeEEEECCCCCcCCeE
Confidence 3589999999999644333
No 49
>3v33_A Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens}
Probab=36.95 E-value=18 Score=37.33 Aligned_cols=57 Identities=25% Similarity=0.368 Sum_probs=38.9
Q ss_pred hCCChhHHHHhhccceeeeeeeeeeeecCCcccccCCccccccccchhhhhhhchhhhhhhhccchhhhhhhh
Q 003314 161 AGKRPEILTIIQNCVVISVFCCVFYSHCGNRAVLRHRPLERRNSSWFSLWKKEERNTWLAKFLRMNELKDQVC 233 (831)
Q Consensus 161 a~~~~~~~~i~~~~~~~~~ac~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 233 (831)
+..+||+-.++++- ++=|++.||..++++.|++|.-++.=.|.+|. +.+.+-|.|.|
T Consensus 139 ~~e~p~~k~~Ie~r-------lI~ytFv~D~FmppdDplgR~Gp~l~~~L~~~---------~~~~~~~~~~~ 195 (223)
T 3v33_A 139 QGERQEWKRFIEER-------LLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKK---------PLTLEHRKQPC 195 (223)
T ss_dssp HTTCHHHHHHHHHH-------EECCEEETTEEECCSSTTCTTSCCHHHHTBSC---------C----------
T ss_pred HhhCHHHHHHHHhC-------eeeEEEECCEEeCCCCcccCCCCCHHHHhccC---------CCCcccCCCCC
Confidence 35778988899887 45699999999999999999998887666665 55666678888
No 50
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=26.38 E-value=35 Score=36.28 Aligned_cols=43 Identities=14% Similarity=0.012 Sum_probs=24.2
Q ss_pred eEEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCC
Q 003314 382 LWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPS 438 (831)
Q Consensus 382 ~wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs 438 (831)
..+.++||.= | + -+...+++.... .+..+.++++||.+--++.
T Consensus 50 ~~i~viGDIH-G-~-~~~L~~ll~~~~-----------~~~~~~~vflGD~VDRG~~ 92 (309)
T 2ie4_C 50 CPVTVCGDVH-G-Q-FHDLMELFRIGG-----------KSPDTNYLFMGDYVDRGYY 92 (309)
T ss_dssp SSEEEECCCT-T-C-HHHHHHHHHHHC-----------CTTTSCEEECSCCSSSSTT
T ss_pred CCEEEEecCC-C-C-HHHHHHHHHHcC-----------CCCCCEEEEeCCccCCCCC
Confidence 3478888883 3 1 234555554311 1234557899997765443
No 51
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=25.07 E-value=87 Score=33.55 Aligned_cols=78 Identities=13% Similarity=0.136 Sum_probs=38.6
Q ss_pred hccccHHHHHHhhccCcccc-cCccccccccCCCCCeEEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccE
Q 003314 347 VGRFDMRMMQAAMNKDQEGA-QHGDLLYDHLSEKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDV 425 (831)
Q Consensus 347 ~g~fD~R~lqaa~~~~~~~~-~~~~~~~~~~~~~~~~wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdf 425 (831)
.++...+.+...+.+..+-. +.+.+ -+++..++..+.++||.= |. -+...+++..... .|..+.
T Consensus 26 ~~~l~~~~~~~l~~~~~~il~~ep~l--~~l~~p~~~ri~viGDIH-G~--~~~L~~ll~~~g~----------~~~~~~ 90 (315)
T 3h63_A 26 QKKLHRKCAYQILVQVKEVLSKLSTL--VETTLKETEKITVCGDTH-GQ--FYDLLNIFELNGL----------PSETNP 90 (315)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHTSCSE--EEECCCTTCEEEEECCCT-TC--HHHHHHHHHHHCC----------CBTTBC
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCCCe--EEEecCCCceEEEEecCC-CC--HHHHHHHHHHhCC----------CCCCCE
Confidence 45566666555544321110 11121 123344567789999983 21 2345555543110 122345
Q ss_pred EEEcccccCCCCCh
Q 003314 426 LLIGGDLAYPNPSA 439 (831)
Q Consensus 426 LVlgGDlvYP~gs~ 439 (831)
++.+||.+--++..
T Consensus 91 ~vflGD~VDRG~~s 104 (315)
T 3h63_A 91 YIFNGDFVDRGSFS 104 (315)
T ss_dssp EEEESCCSSSSTTH
T ss_pred EEEeCCccCCCcCh
Confidence 89999977655543
No 52
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=24.80 E-value=19 Score=40.79 Aligned_cols=59 Identities=14% Similarity=0.183 Sum_probs=33.0
Q ss_pred CCCeEEEEEeecCCCCCC-chHHHHHhcccccccccCC--CCcccCCccEEEEcccccCCCC
Q 003314 379 KEDLWFDFMADTGDGGNS-SYSVARLLAQPHIRVTRDD--SVFTLPRGDVLLIGGDLAYPNP 437 (831)
Q Consensus 379 ~~~~wFd~VgDtGDG~dS-tYtVArLmAqp~L~v~~~~--~~~~lPrgdfLVlgGDlvYP~g 437 (831)
+++.+..+|+|++=|.+. .+..+-.+-...|.-..++ +...-.+-.-||+.||.+=..+
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~ 259 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHST 259 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC--
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCcccccc
Confidence 466799999999988775 3344433332233211110 0011235677999999886653
No 53
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=23.00 E-value=43 Score=35.99 Aligned_cols=42 Identities=21% Similarity=0.271 Sum_probs=24.4
Q ss_pred EEEEEeecCCCCCCchHHHHHhcccccccccCCCCcccCCccEEEEcccccCCCCC
Q 003314 383 WFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPS 438 (831)
Q Consensus 383 wFd~VgDtGDG~dStYtVArLmAqp~L~v~~~~~~~~lPrgdfLVlgGDlvYP~gs 438 (831)
.+.++||.= |. -+...+++.+-. .|..+-++++||.|--++.
T Consensus 58 ~i~viGDIH-G~--~~~L~~ll~~~g-----------~~~~~~~vflGD~VDRG~~ 99 (330)
T 1fjm_A 58 PLKICGDIH-GQ--YYDLLRLFEYGG-----------FPPESNYLFLGDYVDRGKQ 99 (330)
T ss_dssp SEEEECBCT-TC--HHHHHHHHHHHC-----------STTSSCEEECSCCSSSSSC
T ss_pred ceEEecCCC-CC--HHHHHHHHHHhC-----------CCCcceEEeCCCcCCCCCC
Confidence 478899983 21 244555554321 1334558999997765543
No 54
>1f2t_B RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_B* 1us8_B*
Probab=20.48 E-value=1.2e+02 Score=28.44 Aligned_cols=31 Identities=13% Similarity=0.256 Sum_probs=12.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCeEEEEecCC
Q 003314 545 DIDVYQFKFFAELVKEQVGERDSVIIMTHEP 575 (831)
Q Consensus 545 dID~~Q~~wFe~ll~~~v~~~d~VIL~tHeP 575 (831)
.+|....+.+.+.+++..+.+..||+++|.+
T Consensus 93 ~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~ 123 (148)
T 1f2t_B 93 YLDEERRRKLITIMERYLKKIPQVILVSHDE 123 (148)
T ss_dssp TTCHHHHHHHHHHHHHTGGGSSEEEEEESCG
T ss_pred cCCHHHHHHHHHHHHHHHccCCEEEEEEChH
Confidence 3444444444444432111223444444443
Done!