Your job contains 1 sequence.
>003318
MLGLAQKNSPFPIFFCKFRRNRPKFSCLLDHANVIAAAAAAGKAHGAVTSAITHVAVTAV
AIASGACLSTKVDFLWPKLEEQPGTFIVDGVDVTGYPIFNDEQVQKAIAFAKRAHHGQFR
KTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVA
KLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEANDLRVMLLGMVDDPRVVLIKLADRLH
NMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAELEDLCFAVLQMRADLASMWSP
RNRVGYSRRITTIVSSPPLDERTASDDESFTTFDEHVLSMKDLLEAVVPFDILSDRRKRT
KFLHDLAKSSEAQKKAKVVQDAGIALTSLVACEEALEKELLISTSYIPGMEVTLSSRLKS
LYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLDIVHRLWIPIDGE
FDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAHWLYKETGNKLQS
ISSMDESDIEASSSLSKDTDDHNPLDTDLFQKYSSLKMGHPVIRVEGSNLLAAVIIRVEK
GGRELLVAVSFGLAASEVVADRRPSFQIKCWEAYARLYKKASDEWWCQPGHGDWCTCLEK
YTLCRDGMYHKQDQFGRLLPTFIQITHLTEEEESEYWAVVSAVFEGKPVDSVVSRRSSDS
VAPTSMEASINNKVRLLRTMLRWEEQLRSEASLRQSKLGGKANGNPDSVVPGEVVIVCWP
NGEIMRLRSGSTAADAAMKVGLEGKLVLVNGQLVLPNTELKDGDIVEVRV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003318
(830 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|DET_0005 - symbol:DET_0005 "GTP pyrophosphokinas... 356 2.2e-62 3
TAIR|locus:2088262 - symbol:RSH2 "RELA/SPOT homolog 2" sp... 393 8.6e-59 2
TAIR|locus:2014335 - symbol:RSH3 "RELA/SPOT homolog 3" sp... 404 8.8e-59 2
UNIPROTKB|Q3A9Z8 - symbol:relA "GTP pyrophosphokinase" sp... 311 5.7e-54 3
TIGR_CMR|CHY_2223 - symbol:CHY_2223 "GTP pyrophosphokinas... 311 5.7e-54 3
TIGR_CMR|GSU_2236 - symbol:GSU_2236 "GTP pyrophosphokinas... 296 4.8e-52 3
TIGR_CMR|BA_4637 - symbol:BA_4637 "GTP pyrophosphokinase"... 298 1.7e-49 3
UNIPROTKB|Q4K899 - symbol:relA "GTP diphosphokinase" spec... 331 4.2e-48 3
TIGR_CMR|CJE_1408 - symbol:CJE_1408 "RelA/SpoT family pro... 286 8.2e-48 3
TAIR|locus:2137869 - symbol:RSH1 "RELA/SPOT homolog 1" sp... 346 1.2e-47 3
TIGR_CMR|CBU_1375 - symbol:CBU_1375 "GTP pyrophosphokinas... 327 4.4e-45 3
UNIPROTKB|P66014 - symbol:relA "Bifunctional (p)ppGpp syn... 263 5.7e-45 3
UNIPROTKB|Q9S3S3 - symbol:relA "PpGpp synthetase I" speci... 316 5.9e-45 3
TIGR_CMR|VC_2451 - symbol:VC_2451 "GTP pyrophosphokinase"... 316 5.9e-45 3
TIGR_CMR|SPO_3203 - symbol:SPO_3203 "guanosine-3',5'-bis(... 276 2.4e-43 3
TIGR_CMR|SO_3455 - symbol:SO_3455 "GTP pyrophosphokinase"... 314 1.0e-41 3
UNIPROTKB|P0AG24 - symbol:spoT "guanosine 3'-diphosphate ... 267 1.1e-41 3
TIGR_CMR|SO_0359 - symbol:SO_0359 "guanosine-3,5-bis(diph... 267 1.1e-41 2
UNIPROTKB|P0AG20 - symbol:relA "GDP pyrophosphokinase / G... 302 4.9e-41 3
UNIPROTKB|Q9KNM2 - symbol:spoT "Guanosine-3',5'-bis(dipho... 255 4.0e-40 3
TIGR_CMR|VC_2710 - symbol:VC_2710 "guanosine-3',5'-bis(di... 255 4.0e-40 3
TIGR_CMR|CBU_0303 - symbol:CBU_0303 "guanosine-3,5-bis(di... 283 3.5e-38 3
TIGR_CMR|CPS_4115 - symbol:CPS_4115 "GTP pyrophosphokinas... 292 1.1e-36 3
TIGR_CMR|CPS_4973 - symbol:CPS_4973 "guanosine-3,5-bis(di... 289 1.4e-32 2
TAIR|locus:2090487 - symbol:CRSH "Ca2+-activated RelA/spo... 179 2.3e-16 2
UNIPROTKB|F1MR07 - symbol:HDDC3 "Uncharacterized protein"... 130 3.7e-10 2
UNIPROTKB|H0YNP9 - symbol:HDDC3 "Guanosine-3',5'-bis(diph... 125 6.6e-10 2
UNIPROTKB|Q8N4P3 - symbol:HDDC3 "Guanosine-3',5'-bis(diph... 125 2.3e-08 2
UNIPROTKB|Q722A6 - symbol:LMOf2365_0828 "HD domain protei... 138 3.1e-08 1
RGD|1311839 - symbol:Hddc3 "HD domain containing 3" speci... 121 3.5e-08 2
UNIPROTKB|E2QTM0 - symbol:HDDC3 "Uncharacterized protein"... 124 5.8e-08 2
UNIPROTKB|F1RMH8 - symbol:HDDC3 "Uncharacterized protein"... 122 9.8e-08 2
MGI|MGI:1915945 - symbol:Hddc3 "HD domain containing 3" s... 120 1.9e-07 2
ZFIN|ZDB-GENE-050417-377 - symbol:hddc3 "HD domain contai... 112 1.5e-06 2
WB|WBGene00014148 - symbol:ZK909.3 species:6239 "Caenorha... 117 0.00018 2
UNIPROTKB|Q722B6 - symbol:LMOf2365_0818 "Putative unchara... 118 0.00022 1
DICTYBASE|DDB_G0287233 - symbol:spoT "guanosine polyphosp... 104 0.00028 2
FB|FBgn0039650 - symbol:Mesh1 "Metazoan SpoT homolog-1" s... 95 0.00084 2
>TIGR_CMR|DET_0005 [details] [associations]
symbol:DET_0005 "GTP pyrophosphokinase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
GO:GO:0016301 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.10.20.30 InterPro:IPR012675 eggNOG:COG0317
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:YP_180760.1
ProteinModelPortal:Q3ZAI9 STRING:Q3ZAI9 GeneID:3229138
KEGG:det:DET0005 PATRIC:21607115 OMA:SGEPFIE ProtClustDB:CLSK836839
BioCyc:DETH243164:GJNF-5-MONOMER Uniprot:Q3ZAI9
Length = 728
Score = 356 (130.4 bits), Expect = 2.2e-62, Sum P(3) = 2.2e-62
Identities = 90/219 (41%), Positives = 129/219 (58%)
Query: 104 VQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDD 163
+++A +A AH GQ RK+G+P++ H ++ LA L S T+ A +LHDV +D
Sbjct: 22 LEEAYNYAAAAHTGQMRKSGEPFIEHPLNVAITLADLQLDSA-----TLAAALLHDVPED 76
Query: 164 ACESLGSIEEEFGDEVAKLVAGVSRLSYI--NQLLRRHRRINVNQGTLGHEEANDLRVML 221
A SL IE++FG +VAKLV GV++LS + + RR G +A +LR ML
Sbjct: 77 AHISLEQIEKKFGADVAKLVDGVTKLSKLALGPGIEDARRPG---GNASLRQAENLRKML 133
Query: 222 LGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAELE 281
+ M +D RVV IKLADR HNMRT+ AL K R++A+ET+ I+ LA RLG+W LK +LE
Sbjct: 134 VAMSEDLRVVFIKLADRFHNMRTLQALSAEKRRSIAKETMEIYAPLAHRLGIWELKWQLE 193
Query: 282 DLCFAVLQMR--ADLASMWSPR--NRVGYSRRITTIVSS 316
DL F L R +A++ + R Y ++ I+ S
Sbjct: 194 DLAFRYLDPRHYRQVANLVDSKLAQRKNYIEHVSAILQS 232
Score = 316 (116.3 bits), Expect = 2.2e-62, Sum P(3) = 2.2e-62
Identities = 68/132 (51%), Positives = 82/132 (62%)
Query: 409 GMEVTLSSRLKSLYSIFSKMRR-KDVG--IHKVYDARALRVVVGDKNGTLHGPAIQCCYS 465
G++V LS R K LYSI+ KM + G +YD ALRV+V D I CY
Sbjct: 238 GLKVELSGRPKHLYSIYQKMEKYASQGKQFEDIYDVLALRVLVND---------IPDCYH 288
Query: 466 LLDIVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGL 525
+ IVH LW PI G FDDYI NPKP+GYQSLHTAV + LEVQ+RT +MH AE+G+
Sbjct: 289 AIGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSLGTTPLEVQVRTYQMHHIAEYGV 348
Query: 526 AAHWLYKETGNK 537
AAHW YK G +
Sbjct: 349 AAHWRYKTAGKE 360
Score = 90 (36.7 bits), Expect = 2.2e-62, Sum P(3) = 2.2e-62
Identities = 28/106 (26%), Positives = 51/106 (48%)
Query: 727 EASINNKVRLLRTMLRWEEQLRSEASLRQSKLGGKANGNPDSVVPGEVVIVCWPNGEIMR 786
+ + +++ LR ++ W +R +S K + + + V V P GEI
Sbjct: 361 DVNFEDRIGWLRQLIEWHRDMRGAEEFLESV---KTD------IFNDQVFVFTPKGEIKD 411
Query: 787 LRSGSTAADAAMKVGLE-GKLVL---VNGQLVLPNTELKDGDIVEV 828
L G+T D A ++ E G + NG+LV + +LK+G++VE+
Sbjct: 412 LAKGATPIDFAYRIHTELGNRCIGAKANGRLVPLDYQLKNGEVVEI 457
>TAIR|locus:2088262 [details] [associations]
symbol:RSH2 "RELA/SPOT homolog 2" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0015969 "guanosine tetraphosphate metabolic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008728 "GTP diphosphokinase activity" evidence=IGI]
[GO:0009611 "response to wounding" evidence=IEP;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0007165
"signal transduction" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009620 "response to fungus"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] InterPro:IPR003607 InterPro:IPR007685
Pfam:PF04607 SMART:SM00471 SMART:SM00954 GO:GO:0009737
GO:GO:0009507 EMBL:CP002686 GO:GO:0009611 GO:GO:0016301
EMBL:AB019229 eggNOG:COG0317 InterPro:IPR026020 PANTHER:PTHR21262
GO:GO:0008728 GO:GO:0015969 IPI:IPI00520491 RefSeq:NP_188021.1
UniGene:At.25183 ProteinModelPortal:Q9LVJ3 SMR:Q9LVJ3 STRING:Q9LVJ3
PaxDb:Q9LVJ3 PRIDE:Q9LVJ3 EnsemblPlants:AT3G14050.1 GeneID:820619
KEGG:ath:AT3G14050 TAIR:At3g14050 InParanoid:Q9LVJ3 OMA:CKYSSFV
PhylomeDB:Q9LVJ3 ProtClustDB:CLSN2684912 Genevestigator:Q9LVJ3
Uniprot:Q9LVJ3
Length = 709
Score = 393 (143.4 bits), Expect = 8.6e-59, Sum P(2) = 8.6e-59
Identities = 93/190 (48%), Positives = 120/190 (63%)
Query: 96 YPIFNDEQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAG 155
+ IFNDE V KA A++AH GQ R + DPYL HC+ T AML+ + G + VVAG
Sbjct: 203 HKIFNDESVIKAFYEAEKAHRGQMRASRDPYLQHCVET----AMLLANIGANST-VVVAG 257
Query: 156 ILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEAN 215
+LHD +DD+ S I FG VA LV GVS+LS +++L R + N T+ EA+
Sbjct: 258 LLHDTIDDSFMSYDYILRNFGAGVADLVEGVSKLSQLSKLAREN---NTACKTV---EAD 311
Query: 216 DLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASRLGLWA 275
L M L M D R VLIKLADRLHNM+T+YAL P K + A+ETL I+ LA+RLG+
Sbjct: 312 RLHTMFLAMAD-ARAVLIKLADRLHNMKTLYALSPVKQQRFAKETLEIFAPLANRLGIST 370
Query: 276 LKAELEDLCF 285
K +LE+LCF
Sbjct: 371 WKVQLENLCF 380
Score = 287 (106.1 bits), Expect = 8.6e-59, Sum P(2) = 8.6e-59
Identities = 62/127 (48%), Positives = 77/127 (60%)
Query: 414 LSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLDIVHRL 473
L R KSLYSI+SKM +K + + +++D LR++V D G CY L +VH L
Sbjct: 425 LCGRHKSLYSIYSKMLKKKLTVDEIHDIHGLRLIV-DNEGD--------CYKALGVVHSL 475
Query: 474 WIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAHWLYKE 533
W + G+ DYI +PK +GYQSLHT V LEVQIRTQ+MH AE G AAHW YKE
Sbjct: 476 WSEVPGKLKDYITHPKFNGYQSLHTVVMDNGTVPLEVQIRTQEMHLQAEFGFAAHWRYKE 535
Query: 534 TGNKLQS 540
G K S
Sbjct: 536 GGCKYSS 542
>TAIR|locus:2014335 [details] [associations]
symbol:RSH3 "RELA/SPOT homolog 3" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0015969 "guanosine tetraphosphate metabolic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0008728 "GTP diphosphokinase activity" evidence=IGI]
InterPro:IPR003607 InterPro:IPR006674 InterPro:IPR007685
Pfam:PF01966 Pfam:PF04607 SMART:SM00471 SMART:SM00954 EMBL:CP002684
GO:GO:0009507 GO:GO:0046872 EMBL:AC006577 GO:GO:0008081
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0008728 GO:GO:0015969
ProtClustDB:CLSN2684912 EMBL:AK227169 IPI:IPI00547761 PIR:D96582
RefSeq:NP_564652.2 UniGene:At.11116 ProteinModelPortal:Q9SYH1
SMR:Q9SYH1 STRING:Q9SYH1 EnsemblPlants:AT1G54130.1 GeneID:841853
KEGG:ath:AT1G54130 TAIR:At1g54130 HOGENOM:HOG000243166
InParanoid:Q9SYH1 OMA:QRMYERG PhylomeDB:Q9SYH1
Genevestigator:Q9SYH1 Uniprot:Q9SYH1
Length = 715
Score = 404 (147.3 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 96/190 (50%), Positives = 120/190 (63%)
Query: 96 YPIFNDEQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAG 155
+ IF DE V KA A++AH GQ R TGDPYL HC+ T AML+ G + VVAG
Sbjct: 207 HKIFEDESVIKAFYEAEKAHRGQMRATGDPYLQHCVET----AMLLADIGANST-VVVAG 261
Query: 156 ILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEAN 215
ILHD +DD+ S I FG VA LV GVS+LS +++L R + N T+ EA+
Sbjct: 262 ILHDTLDDSFMSYDYILRTFGSGVADLVEGVSKLSQLSKLAREN---NTACKTV---EAD 315
Query: 216 DLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASRLGLWA 275
L M L M D R VLIKLADRLHNM T+YALPP K + A+ETL I+ LA+RLG+ +
Sbjct: 316 RLHTMFLAMAD-ARAVLIKLADRLHNMMTLYALPPVKRQRFAKETLEIFAPLANRLGISS 374
Query: 276 LKAELEDLCF 285
K +LE+LCF
Sbjct: 375 WKVKLENLCF 384
Score = 275 (101.9 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
Identities = 58/121 (47%), Positives = 79/121 (65%)
Query: 414 LSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLDIVHRL 473
+S R KSLYSI+ KM +K + + +++D LR++V ++ CY L +VH+L
Sbjct: 429 VSGRHKSLYSIYCKMLKKKLTMDEIHDIHGLRLIVDNEKD---------CYKALGVVHKL 479
Query: 474 WIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSA-LEVQIRTQKMHEYAEHGLAAHWLYK 532
W + G+ DYI +PK +GYQSLHT V G DG+ LEVQIRT++MH AE G AAHW YK
Sbjct: 480 WSEVPGKLKDYISHPKFNGYQSLHTVVMG-DGTIPLEVQIRTKEMHLQAEFGFAAHWRYK 538
Query: 533 E 533
E
Sbjct: 539 E 539
>UNIPROTKB|Q3A9Z8 [details] [associations]
symbol:relA "GTP pyrophosphokinase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0008728 "GTP
diphosphokinase activity" evidence=ISS] [GO:0015968 "stringent
response" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016301
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015968 eggNOG:COG0317
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:YP_361036.1
ProteinModelPortal:Q3A9Z8 SMR:Q3A9Z8 STRING:Q3A9Z8 GeneID:3727840
KEGG:chy:CHY_2223 PATRIC:21277513 OMA:SEKRIDR
BioCyc:CHYD246194:GJCN-2222-MONOMER Uniprot:Q3A9Z8
Length = 716
Score = 311 (114.5 bits), Expect = 5.7e-54, Sum P(3) = 5.7e-54
Identities = 66/140 (47%), Positives = 88/140 (62%)
Query: 396 LEKELLISTSYIPGMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTL 455
LE++L SY ++ + R K LYSIF KMR + +VYD A+RV+V
Sbjct: 220 LEEKL---KSY--NIKAKIEGRPKHLYSIFQKMREQQKDFSEVYDVMAVRVIV------- 267
Query: 456 HGPAIQCCYSLLDIVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQ 515
+++ CY++L I+H +WIP+ G F DYI PK + YQSLHT V GP G LE+QIRT
Sbjct: 268 --ESVRDCYTVLGIIHTMWIPVPGRFKDYIAMPKSNMYQSLHTTVIGPFGEPLEIQIRTF 325
Query: 516 KMHEYAEHGLAAHWLYKETG 535
+MH AE+G+AAHW YKE G
Sbjct: 326 EMHRTAEYGIAAHWRYKEGG 345
Score = 277 (102.6 bits), Expect = 5.7e-54, Sum P(3) = 5.7e-54
Identities = 65/139 (46%), Positives = 86/139 (61%)
Query: 150 DTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTL 209
+T+ AG+LHDVV+D ++ I EFG+EVA LV GV++LS RI
Sbjct: 64 ETIAAGLLHDVVEDTAYTIEDIAREFGEEVANLVDGVTKLS----------RIEFKNKE- 112
Query: 210 GHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLAS 269
++ +LR M L M D RV+LIKLADRLHNMRT+ P K + +A+ETL I+ LA
Sbjct: 113 -EQQVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHNPEKQKEIARETLEIFAPLAH 171
Query: 270 RLGLWALKAELEDLCFAVL 288
RLG++ +K ELEDL F L
Sbjct: 172 RLGIYRIKWELEDLAFRYL 190
Score = 199 (75.1 bits), Expect = 7.9e-46, Sum P(3) = 7.9e-46
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 100 NDEQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHD 159
++E ++KA FA AH GQ R +G+ Y+TH + ILA L +T+ AG+LHD
Sbjct: 19 DEELIKKAYNFAAEAHAGQKRASGEDYITHPLAVAFILAGLQMDD-----ETIAAGLLHD 73
Query: 160 VVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEANDLRV 219
VV+D ++ I EFG+EVA LV GV++LS I + +++ N + A D+RV
Sbjct: 74 VVEDTAYTIEDIAREFGEEVANLVDGVTKLSRIEFKNKEEQQVE-NLRKMFLAMAKDIRV 132
Query: 220 MLLGMVD 226
+L+ + D
Sbjct: 133 ILIKLAD 139
Score = 98 (39.6 bits), Expect = 5.7e-54, Sum P(3) = 5.7e-54
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 727 EASINNKVRLLRTMLRWEEQLRSEASLRQSKLGGKANGNPDSVVPGEVVIVCWPNGEIMR 786
+ + K+ LR +L W+ +L+ ++ K + DSV V P G+++
Sbjct: 348 DKKFDEKLSWLRQILEWQRELKDAREFMETL---KVDIFSDSV------FVFTPKGDVVE 398
Query: 787 LRSGSTAADAAMKVGLE-GKLVL---VNGQLVLPNTELKDGDIVEV 828
L +GS D A ++ + G + VNG+LV + +LK+GDIVE+
Sbjct: 399 LPAGSVPIDFAYRIHTDVGNRCVGAKVNGRLVPLDYQLKNGDIVEI 444
>TIGR_CMR|CHY_2223 [details] [associations]
symbol:CHY_2223 "GTP pyrophosphokinase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0008728 "GTP
diphosphokinase activity" evidence=ISS] [GO:0015968 "stringent
response" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016301
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015968 eggNOG:COG0317
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:YP_361036.1
ProteinModelPortal:Q3A9Z8 SMR:Q3A9Z8 STRING:Q3A9Z8 GeneID:3727840
KEGG:chy:CHY_2223 PATRIC:21277513 OMA:SEKRIDR
BioCyc:CHYD246194:GJCN-2222-MONOMER Uniprot:Q3A9Z8
Length = 716
Score = 311 (114.5 bits), Expect = 5.7e-54, Sum P(3) = 5.7e-54
Identities = 66/140 (47%), Positives = 88/140 (62%)
Query: 396 LEKELLISTSYIPGMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTL 455
LE++L SY ++ + R K LYSIF KMR + +VYD A+RV+V
Sbjct: 220 LEEKL---KSY--NIKAKIEGRPKHLYSIFQKMREQQKDFSEVYDVMAVRVIV------- 267
Query: 456 HGPAIQCCYSLLDIVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQ 515
+++ CY++L I+H +WIP+ G F DYI PK + YQSLHT V GP G LE+QIRT
Sbjct: 268 --ESVRDCYTVLGIIHTMWIPVPGRFKDYIAMPKSNMYQSLHTTVIGPFGEPLEIQIRTF 325
Query: 516 KMHEYAEHGLAAHWLYKETG 535
+MH AE+G+AAHW YKE G
Sbjct: 326 EMHRTAEYGIAAHWRYKEGG 345
Score = 277 (102.6 bits), Expect = 5.7e-54, Sum P(3) = 5.7e-54
Identities = 65/139 (46%), Positives = 86/139 (61%)
Query: 150 DTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTL 209
+T+ AG+LHDVV+D ++ I EFG+EVA LV GV++LS RI
Sbjct: 64 ETIAAGLLHDVVEDTAYTIEDIAREFGEEVANLVDGVTKLS----------RIEFKNKE- 112
Query: 210 GHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLAS 269
++ +LR M L M D RV+LIKLADRLHNMRT+ P K + +A+ETL I+ LA
Sbjct: 113 -EQQVENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYHNPEKQKEIARETLEIFAPLAH 171
Query: 270 RLGLWALKAELEDLCFAVL 288
RLG++ +K ELEDL F L
Sbjct: 172 RLGIYRIKWELEDLAFRYL 190
Score = 199 (75.1 bits), Expect = 7.9e-46, Sum P(3) = 7.9e-46
Identities = 48/127 (37%), Positives = 74/127 (58%)
Query: 100 NDEQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHD 159
++E ++KA FA AH GQ R +G+ Y+TH + ILA L +T+ AG+LHD
Sbjct: 19 DEELIKKAYNFAAEAHAGQKRASGEDYITHPLAVAFILAGLQMDD-----ETIAAGLLHD 73
Query: 160 VVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEANDLRV 219
VV+D ++ I EFG+EVA LV GV++LS I + +++ N + A D+RV
Sbjct: 74 VVEDTAYTIEDIAREFGEEVANLVDGVTKLSRIEFKNKEEQQVE-NLRKMFLAMAKDIRV 132
Query: 220 MLLGMVD 226
+L+ + D
Sbjct: 133 ILIKLAD 139
Score = 98 (39.6 bits), Expect = 5.7e-54, Sum P(3) = 5.7e-54
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 727 EASINNKVRLLRTMLRWEEQLRSEASLRQSKLGGKANGNPDSVVPGEVVIVCWPNGEIMR 786
+ + K+ LR +L W+ +L+ ++ K + DSV V P G+++
Sbjct: 348 DKKFDEKLSWLRQILEWQRELKDAREFMETL---KVDIFSDSV------FVFTPKGDVVE 398
Query: 787 LRSGSTAADAAMKVGLE-GKLVL---VNGQLVLPNTELKDGDIVEV 828
L +GS D A ++ + G + VNG+LV + +LK+GDIVE+
Sbjct: 399 LPAGSVPIDFAYRIHTDVGNRCVGAKVNGRLVPLDYQLKNGDIVEI 444
>TIGR_CMR|GSU_2236 [details] [associations]
symbol:GSU_2236 "GTP pyrophosphokinase" species:243231
"Geobacter sulfurreducens PCA" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
GO:GO:0016301 GO:GO:0016787 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.10.20.30 InterPro:IPR012675 InterPro:IPR026020
PANTHER:PTHR21262 KO:K00951 GO:GO:0015969 TIGRFAMs:TIGR00691
HOGENOM:HOG000018299 OMA:RAYFYAE RefSeq:NP_953285.1
ProteinModelPortal:Q74AW3 SMR:Q74AW3 DNASU:2687525 GeneID:2687525
KEGG:gsu:GSU2236 PATRIC:22027327 ProtClustDB:CLSK924587
BioCyc:GSUL243231:GH27-2208-MONOMER Uniprot:Q74AW3
Length = 716
Score = 296 (109.3 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 62/136 (45%), Positives = 84/136 (61%)
Query: 398 KELLISTSYIPGMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHG 457
+++++S ++ + R K LYSI+ KM+ ++V I ++YD A+RV+V D
Sbjct: 217 RQIIVSKLAEHDLKGDVFGRSKHLYSIWRKMQARNVDIDQIYDLVAIRVMVND------- 269
Query: 458 PAIQCCYSLLDIVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKM 517
I+ CY +L I+H W PI G F DYI PK + YQSLHT V GP G +EVQIRT M
Sbjct: 270 --IRECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGPHGERMEVQIRTSDM 327
Query: 518 HEYAEHGLAAHWLYKE 533
H AE G+AAHW YKE
Sbjct: 328 HRVAEAGIAAHWKYKE 343
Score = 282 (104.3 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 75/192 (39%), Positives = 109/192 (56%)
Query: 129 HCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSR 188
+ +H + +L + K V TVV G+LHD ++D + +E FG EVA LV GV++
Sbjct: 45 YLVHPMEVAGVL--ADLKLDVPTVVTGLLHDTIEDTLTTREELEGMFGAEVANLVDGVTK 102
Query: 189 LSYINQLLRRHRRINVNQGTLGHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYAL 248
+ I H + T +A + R MLL M +D RV+L+KLADRLHNMRT+
Sbjct: 103 IGKI------HFK------TKEESQAENFRKMLLAMANDIRVILVKLADRLHNMRTLQYQ 150
Query: 249 PPAKARAVAQETLLIWCSLASRLGLWALKAELEDLCFAVL--QMRADLASMWSPRN--RV 304
P K R++++ETL I+ LA+RLG+ +K+ELEDL F L Q+ DLAS + + R
Sbjct: 151 PEPKQRSISRETLDIYAPLANRLGISWIKSELEDLSFRYLEPQIYYDLASKVAKKKKERE 210
Query: 305 GYSRRITTIVSS 316
Y + I+ S
Sbjct: 211 SYVEEVRQIIVS 222
Score = 192 (72.6 bits), Expect = 1.2e-42, Sum P(3) = 1.2e-42
Identities = 50/141 (35%), Positives = 78/141 (55%)
Query: 87 IVDGVDVTGYPIFNDEQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGK 146
I+D V VT P+ + + ++KA + + H GQ R +G+PYL H + +LA L K
Sbjct: 7 ILDKV-VTYNPVADLDLIRKAYVYCAKVHQGQTRLSGEPYLVHPMEVAGVLADL-----K 60
Query: 147 RAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRI-NVN 205
V TVV G+LHD ++D + +E FG EVA LV GV+++ I+ + + N
Sbjct: 61 LDVPTVVTGLLHDTIEDTLTTREELEGMFGAEVANLVDGVTKIGKIHFKTKEESQAENFR 120
Query: 206 QGTLGHEEANDLRVMLLGMVD 226
+ L AND+RV+L+ + D
Sbjct: 121 KMLLAM--ANDIRVILVKLAD 139
Score = 91 (37.1 bits), Expect = 4.8e-52, Sum P(3) = 4.8e-52
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 737 LRTMLRWEEQLR-SEASLRQSKLGGKANGNPDSVVPGEVVIVCWPNGEIMRLRSGSTAAD 795
LR +L W+++L+ S + K+ + P EV + P G++ GST D
Sbjct: 358 LRQLLEWQQELQDSHEFMNTVKV---------ELFPEEVYVFT-PRGDVKSFPKGSTPID 407
Query: 796 AAMKVGLE-GKLVL---VNGQLVLPNTELKDGDIVEV 828
A + + G + VNG+LV ELK+GDIVEV
Sbjct: 408 LAYTIHTDIGHRCVGAKVNGKLVPLKYELKNGDIVEV 444
Score = 41 (19.5 bits), Expect = 8.0e-47, Sum P(3) = 8.0e-47
Identities = 11/49 (22%), Positives = 24/49 (48%)
Query: 571 QKYSSLKMGHPVIRVEGSNLLAAVIIRVEKGGRELLVAVSFGLAASEVV 619
++ S+ +G ++ E + + +++K G VA FGL+ + V
Sbjct: 477 ERVRSISLGKEILEKEFRRY-SLNLAKLQKAGEIKRVASEFGLSTDDDV 524
Score = 37 (18.1 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 366 LAKSSEAQKKAKVVQDAGIALTSLVACEEALEKE 399
+ KSS A+ K + + S+ +E LEKE
Sbjct: 459 IVKSSRARNKIRAWIKTEERVRSISLGKEILEKE 492
>TIGR_CMR|BA_4637 [details] [associations]
symbol:BA_4637 "GTP pyrophosphokinase" species:198094
"Bacillus anthracis str. Ames" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:AE016879 GenomeReviews:AE016879_GR GO:GO:0016301
Gene3D:3.10.20.30 InterPro:IPR012675 InterPro:IPR026020
PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951 GO:GO:0008728
GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:NP_846854.1
ProteinModelPortal:Q81LI2 SMR:Q81LI2 DNASU:1085523
EnsemblBacteria:EBBACT00000012515 GeneID:1085523 KEGG:ban:BA_4637
PATRIC:18786856 ProtClustDB:CLSK887674 Uniprot:Q81LI2
Length = 727
Score = 298 (110.0 bits), Expect = 1.7e-49, Sum P(3) = 1.7e-49
Identities = 61/133 (45%), Positives = 86/133 (64%)
Query: 414 LSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLDIVHRL 473
+S R K +YSI+ KM ++ +++YD A+RVVV +I+ CY++L I+H
Sbjct: 238 ISGRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVN---------SIKDCYAVLGIIHTC 288
Query: 474 WIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAHWLYKE 533
W P+ G F DYI PK + YQSLHT V GP G LEVQIRT++MHE AE G+AAHW YKE
Sbjct: 289 WKPMPGRFKDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKE 348
Query: 534 TGNKLQSISSMDE 546
G ++ ++++
Sbjct: 349 -GKTAETTGTLEK 360
Score = 258 (95.9 bits), Expect = 1.7e-49, Sum P(3) = 1.7e-49
Identities = 67/154 (43%), Positives = 89/154 (57%)
Query: 129 HCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSR 188
+ IH ++ +L+ A TV AG LHDVV+D +L IE EF E+A LV GV++
Sbjct: 50 YIIHPIQVAGVLVDLHMDPA--TVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTK 107
Query: 189 LSYINQLLRRHRRINVNQGTLGHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYAL 248
L I + H + ++A + R M + M D RV+LIKLADRLHNMRT+ L
Sbjct: 108 LGKIKY--KSHEQ----------QQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHL 155
Query: 249 PPAKARAVAQETLLIWCSLASRLGLWALKAELED 282
P K R +A ETL I+ LA RLG+ +K ELED
Sbjct: 156 PQEKQRRIANETLEIFAPLAHRLGISTIKWELED 189
Score = 180 (68.4 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 48/132 (36%), Positives = 69/132 (52%)
Query: 96 YPIFND-EQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVA 154
Y + D E V +A +A+ AH Q+RK+G+PY+ H I +L L TV A
Sbjct: 19 YLVDEDIELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGVLVDLHMDPA-----TVSA 73
Query: 155 GILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEA 214
G LHDVV+D +L IE EF E+A LV GV++L I ++ N + A
Sbjct: 74 GFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQQAE-NHRKMFIAMA 132
Query: 215 NDLRVMLLGMVD 226
D+RV+L+ + D
Sbjct: 133 QDIRVILIKLAD 144
Score = 89 (36.4 bits), Expect = 1.7e-49, Sum P(3) = 1.7e-49
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 773 EVVIVCWPNGEIMRLRSGSTAADAAMKVGLE-GKLVL---VNGQLVLPNTELKDGDIVEV 828
++V V P G++M L GS D A +V E G + VNG++V + +LK GDI+E+
Sbjct: 392 DMVFVFTPKGDVMELPLGSVPIDFAYRVYSEIGNKTIGAKVNGKMVTLDYKLKTGDIIEI 451
>UNIPROTKB|Q4K899 [details] [associations]
symbol:relA "GTP diphosphokinase" species:220664
"Pseudomonas protegens Pf-5" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015969 "guanosine tetraphosphate
metabolic process" evidence=ISS] [GO:0034198 "cellular response to
amino acid starvation" evidence=ISS] InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00954 InterPro:IPR004095
InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0000166
GO:GO:0016301 EMBL:CP000076 GenomeReviews:CP000076_GR
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0034198 eggNOG:COG0317
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
OMA:HRADCDQ GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691
RefSeq:YP_261534.1 ProteinModelPortal:Q4K899 STRING:Q4K899
GeneID:3478565 KEGG:pfl:PFL_4446 PATRIC:19878324
ProtClustDB:CLSK866228 BioCyc:PFLU220664:GIX8-4481-MONOMER
Uniprot:Q4K899
Length = 747
Score = 331 (121.6 bits), Expect = 4.2e-48, Sum P(3) = 4.2e-48
Identities = 68/129 (52%), Positives = 85/129 (65%)
Query: 409 GMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLD 468
G+ +S R K +YSI+ KM+RK + ++YD RA+RV+V P ++ CY+ L
Sbjct: 255 GVNADISGRAKHIYSIWRKMQRKGLEFSQIYDVRAVRVLV---------PEMRDCYTALG 305
Query: 469 IVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAH 528
IVH LW I EFDDYI NPK +GY+SLHTAV GP+G LEVQIRT MHE AE G+ AH
Sbjct: 306 IVHTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIRTHAMHEEAELGVCAH 365
Query: 529 WLYKETGNK 537
W YK T K
Sbjct: 366 WKYKGTDVK 374
Score = 213 (80.0 bits), Expect = 4.2e-48, Sum P(3) = 4.2e-48
Identities = 72/242 (29%), Positives = 118/242 (48%)
Query: 102 EQVQKAIAFAKRAHHGQFR-KTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDV 160
E +++A FA+ A K P TG +A ++ K D++VA +L+
Sbjct: 35 EALKEACEFAREAELQHIATKNLSPEDVSSFSTGLEIAEILADL-KLDQDSLVAAVLYRG 93
Query: 161 VDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEANDLRVM 220
V + L ++ + FG V KL+ GV R++ I L + + + GT E +LR M
Sbjct: 94 VREGQIQLPAVSQRFGPVVTKLIDGVLRMAAITASLSPRQSLVL--GTQAQVE--NLRKM 149
Query: 221 LLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAEL 280
L+ MVDD RV LIKLA+R +R + + K VA+E I+ LA RLG+ +K EL
Sbjct: 150 LVAMVDDVRVALIKLAERTCAIRAVKSADEEKRNRVAREVFDIYAPLAHRLGIGHIKWEL 209
Query: 281 EDLCFAVLQMRA--DLASMWSPRNRVGYSRRITTIVSSPPLDERTASDDESFTTFDEHVL 338
EDL F L+ +A + R R+ R I+ +++ + + + + +H+
Sbjct: 210 EDLSFRYLEPEQYKQIAKLLHER-RLDRERFISDVMNQLQNELKATGVNADISGRAKHIY 268
Query: 339 SM 340
S+
Sbjct: 269 SI 270
Score = 85 (35.0 bits), Expect = 4.2e-48, Sum P(3) = 4.2e-48
Identities = 31/100 (31%), Positives = 47/100 (47%)
Query: 733 KVRLLRTMLRWEEQLRSEASLRQSKLGGKANGNPDSVVPGEVVIVCWPNGEIMRLRSGST 792
K+ LR +L W E+L +GG A + P V I P+G + L G+T
Sbjct: 383 KISWLRQVLEWHEEL--------GDIGGLAEQLRVDIEPDRVYIFT-PDGHAIDLPKGAT 433
Query: 793 AADAAMKVGLE-G---KLVLVNGQLVLPNTELKDGDIVEV 828
D A +V E G + +NG++V N L+ G+ VE+
Sbjct: 434 PLDFAYRVHTEIGHNCRGAKINGRIVPLNYSLQTGEQVEI 473
>TIGR_CMR|CJE_1408 [details] [associations]
symbol:CJE_1408 "RelA/SpoT family protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0015968 "stringent response" evidence=ISS]
InterPro:IPR002912 InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF01842 Pfam:PF04607 SMART:SM00471
SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824
SUPFAM:SSF81271 GO:GO:0003824 GO:GO:0016597 EMBL:CP000025
GenomeReviews:CP000025_GR Gene3D:3.10.20.30 InterPro:IPR012675
eggNOG:COG0317 KO:K01139 InterPro:IPR026020 PANTHER:PTHR21262
GO:GO:0015969 TIGRFAMs:TIGR00691 HOGENOM:HOG000018299
RefSeq:YP_179394.1 ProteinModelPortal:Q5HTJ1 STRING:Q5HTJ1
GeneID:3231914 KEGG:cjr:CJE1408 PATRIC:20044618 OMA:TIHTTIF
ProtClustDB:CLSK872444 BioCyc:CJEJ195099:GJC0-1435-MONOMER
Uniprot:Q5HTJ1
Length = 731
Score = 286 (105.7 bits), Expect = 8.2e-48, Sum P(3) = 8.2e-48
Identities = 67/189 (35%), Positives = 107/189 (56%)
Query: 100 NDEQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHD 159
+D ++KA+ + H GQFRK+G+PY H I ++ L S K ++A +LHD
Sbjct: 36 HDAILEKAVDYCIFCHEGQFRKSGEPYAVHPILVATLVGFL--SENK---SNILAALLHD 90
Query: 160 VVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEANDLRV 219
V++D + + E+FG EV KLV G++++ I R I+ + A R
Sbjct: 91 VIEDTNCTKEELREQFGSEVLKLVLGLTKIIEI----REDNLISSKSKKSLTKSALTFRN 146
Query: 220 MLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAE 279
MLL ++D V+++KL DRLHNM T+ L K + +++ETL+++ +A RLG+ ++K
Sbjct: 147 MLLASIEDVGVLIVKLCDRLHNMLTLDILREDKQKRISEETLVVYAPIAHRLGISSIKNY 206
Query: 280 LEDLCFAVL 288
LEDL F L
Sbjct: 207 LEDLSFKYL 215
Score = 252 (93.8 bits), Expect = 8.2e-48, Sum P(3) = 8.2e-48
Identities = 64/184 (34%), Positives = 105/184 (57%)
Query: 394 EALEK-ELL-ISTSYIPGMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDK 451
E + K ELL +S + G + R+K YSI+ KM+RK +GI +V D +R++V +K
Sbjct: 240 EFISKIELLFLSNGFRQG-SFEIQKRIKHSYSIYLKMQRKGIGIEEVLDLLGVRILV-EK 297
Query: 452 NGTLHGPAIQCCYSLLDIVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQ 511
+ CY L I+H + P+ F DYI PK +GYQ++HT + S +E Q
Sbjct: 298 --------VSDCYLALGILHTHFNPLVSRFKDYIALPKQNGYQTIHTTLFDAK-SIIEAQ 348
Query: 512 IRTQKMHEYAEHGLAAHWLYKETGNKLQS-ISSMDESDIEASSSLSKDTDDHNPLDTDLF 570
IRT MH+ AE G+AAHW YKE G+ + + + + +++ ++L ++ +D+N ++ +
Sbjct: 349 IRTFDMHKIAEFGIAAHWKYKEDGSVVAPRLDWLTDISMQSINNL-ENAEDYNAIELYEY 407
Query: 571 QKYS 574
K S
Sbjct: 408 AKDS 411
Score = 92 (37.4 bits), Expect = 8.2e-48, Sum P(3) = 8.2e-48
Identities = 29/60 (48%), Positives = 31/60 (51%)
Query: 773 EVVIVCWPNGEIMRLRSGSTAADAAM----KVGLEGKLVLVNGQLVLPNTELKDGDIVEV 828
E V V P GEI L G+T D A KVGL K VN V TELK+GDIV V
Sbjct: 415 EDVAVYSPKGEIFTLPRGATVLDFAYEVHTKVGLHAKSAYVNRIKVPLLTELKNGDIVRV 474
>TAIR|locus:2137869 [details] [associations]
symbol:RSH1 "RELA/SPOT homolog 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008081
"phosphoric diester hydrolase activity" evidence=IEA] [GO:0015969
"guanosine tetraphosphate metabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009611 "response to wounding"
evidence=IEP] InterPro:IPR003607 InterPro:IPR007685 Pfam:PF04607
SMART:SM00471 SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676
Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0009507 EMBL:CP002687
GO:GO:0003824 GO:GO:0009611 Gene3D:3.10.20.30 InterPro:IPR012675
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0015969 IPI:IPI00527107
RefSeq:NP_849287.2 UniGene:At.3876 UniGene:At.73164
ProteinModelPortal:F4JHA2 SMR:F4JHA2 PRIDE:F4JHA2
EnsemblPlants:AT4G02260.1 GeneID:828096 KEGG:ath:AT4G02260
OMA:RQMFLAM Uniprot:F4JHA2
Length = 884
Score = 346 (126.9 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 76/185 (41%), Positives = 116/185 (62%)
Query: 102 EQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVV 161
E VQK + A AHHGQ R++G+P++ H + RIL L + +++VAG+LHD V
Sbjct: 148 EFVQKGLKLAFEAHHGQKRRSGEPFIIHPVAVARILGEL-----ELDWESIVAGLLHDTV 202
Query: 162 DDA-CESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEANDLRVM 220
+D + IEEEFG V +V G +++S + +L + T+ +A+DLR M
Sbjct: 203 EDTNFITFEKIEEEFGATVRHIVEGETKVSKLGKL-----KCKTESETIQDVKADDLRQM 257
Query: 221 LLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAEL 280
L M D+ RV+++KLADRLHNMRT+ +PP K ++A ETL ++ LA LG++++K+EL
Sbjct: 258 FLAMTDEVRVIIVKLADRLHNMRTLCHMPPHKQSSIAGETLQVFAPLAKLLGMYSIKSEL 317
Query: 281 EDLCF 285
E+L F
Sbjct: 318 ENLSF 322
Score = 194 (73.4 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 51/119 (42%), Positives = 64/119 (53%)
Query: 419 KSLYSIFSKMRRKDVGIHKVYD--ARALRVVVGDKNGTLHGPAI---QCCYSLLDIVHRL 473
K YSI+ K K G Y+ A+ LR+VV K GP Q CY +L +VH +
Sbjct: 379 KETYSIY-KAALKSKGSINDYNQIAQQLRIVVKPKPSVGVGPLCSPQQICYHVLGLVHEI 437
Query: 474 WIPIDGEFDDYIVNPKPSGYQSLHTAVQG---PDGSALEVQIRTQKMHEYAEHGLAAHW 529
W PI DYI PKP+GYQSLHT V LEVQIRT++M AE G+A ++
Sbjct: 438 WKPIPRTVKDYIATPKPNGYQSLHTTVIPFLYESMFRLEVQIRTEEMDLIAERGIAVYY 496
Score = 88 (36.0 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 772 GEVVIVCWPNGEIMRLRSGSTAADAAMKVGLE--GKLVL--VNGQLVLPNTELKDGDIVE 827
G V V P GEI L G+T D A + E K+V VNG LV P L++ ++VE
Sbjct: 564 GSRVFVFTPKGEIKNLPKGATVVDYAYLIHTEIGNKMVAAKVNGNLVSPTHVLENAEVVE 623
Query: 828 V 828
+
Sbjct: 624 I 624
>TIGR_CMR|CBU_1375 [details] [associations]
symbol:CBU_1375 "GTP pyrophosphokinase" species:227377
"Coxiella burnetii RSA 493" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR004811 InterPro:IPR007685 Pfam:PF04607
SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824
SUPFAM:SSF81271 GO:GO:0000166 GO:GO:0016301 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:3.10.20.30 InterPro:IPR012675
InterPro:IPR026020 PANTHER:PTHR21262 HOGENOM:HOG000018300 KO:K00951
OMA:HRADCDQ GO:GO:0008728 GO:GO:0015969 TIGRFAMs:TIGR00691
RefSeq:NP_820364.1 ProteinModelPortal:Q83BW2 PRIDE:Q83BW2
GeneID:1209281 KEGG:cbu:CBU_1375 PATRIC:17931493
ProtClustDB:CLSK914739 BioCyc:CBUR227377:GJ7S-1363-MONOMER
Uniprot:Q83BW2
Length = 714
Score = 327 (120.2 bits), Expect = 4.4e-45, Sum P(3) = 4.4e-45
Identities = 69/151 (45%), Positives = 95/151 (62%)
Query: 393 EEALEKELLISTSYIPGMEV---TLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVG 449
E+ +EK + G ++ +S R K +YSIF K++RK V ++YD A+R++V
Sbjct: 215 EKYIEKLIEYLEGIFHGSDIEKYNISGRAKHIYSIFRKIQRKQVDFSEIYDTSAVRILVS 274
Query: 450 DKNGTLHGPAIQCCYSLLDIVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALE 509
+++ CY+ L IVH LW PI EFDDYI PK +GY+S+HTAV GP+G +E
Sbjct: 275 ---------SLEDCYTALSIVHALWEPIAKEFDDYIAKPKDNGYRSIHTAVIGPEGHNIE 325
Query: 510 VQIRTQKMHEYAEHGLAAHWLYKETGNKLQS 540
+QIRT MHE AE G+AAHW YKE G K+ S
Sbjct: 326 IQIRTYGMHEEAELGVAAHWKYKE-GKKVAS 355
Score = 191 (72.3 bits), Expect = 4.4e-45, Sum P(3) = 4.4e-45
Identities = 47/139 (33%), Positives = 80/139 (57%)
Query: 150 DTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTL 209
+T+ A +L+ V + S ++ ++ G VAKL+ G R+ I+ +L R + Q +
Sbjct: 62 ETLAAALLYPTVTQSGISQEALTDQIGKSVAKLLMGTKRMETIDDMLIRSSGFSQQQNFV 121
Query: 210 GHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLAS 269
++LR MLL MVDD R+VLIKL++RL +R P ++ + +AQ+ + ++ LA+
Sbjct: 122 -----DNLRKMLLAMVDDVRIVLIKLSERLTTLRYSRHQPISEQKDIAQKIMDLYAPLAN 176
Query: 270 RLGLWALKAELEDLCFAVL 288
RLG+ K ++ED F L
Sbjct: 177 RLGVGQFKWQMEDWAFRYL 195
Score = 81 (33.6 bits), Expect = 4.4e-45, Sum P(3) = 4.4e-45
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 733 KVRLLRTMLRWEEQLRSEASLRQSKLGGKANGNPDSVVPGEVVIVCWPNGEIMRLRSGST 792
K+ LR ++ W++++ + RQ + + + V PNG+++ L +G+T
Sbjct: 360 KINWLREVMDWQKEVSPDVKWRQ--------------IFEDHIYVFTPNGDVIDLEAGAT 405
Query: 793 AADAAMKVGLE-G---KLVLVNGQLVLPNTELKDGDIVEV 828
D A ++ E G + VNG++V LK GD VE+
Sbjct: 406 PLDFAYRIHTEIGHRCRGARVNGKMVPLTRTLKTGDCVEI 445
>UNIPROTKB|P66014 [details] [associations]
symbol:relA "Bifunctional (p)ppGpp synthase/hydrolase relA"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008728 "GTP diphosphokinase activity" evidence=IDA]
[GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=IDA] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0015968 "stringent response" evidence=IMP] [GO:0030145
"manganese ion binding" evidence=IDA] InterPro:IPR003607
InterPro:IPR004811 InterPro:IPR007685 Pfam:PF04607 SMART:SM00471
SMART:SM00954 UniPathway:UPA00908 GO:GO:0005525 InterPro:IPR004095
InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 GO:GO:0009405 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR EMBL:BX842580
GO:GO:0016301 GO:GO:0030145 Gene3D:3.10.20.30 InterPro:IPR012675
GO:GO:0015968 GO:GO:0015970 eggNOG:COG0317 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 KO:K00951 GO:GO:0008728
TIGRFAMs:TIGR00691 PIR:F70725 RefSeq:NP_217099.1 RefSeq:NP_337159.1
RefSeq:YP_006516024.1 ProteinModelPortal:P66014 SMR:P66014
DNASU:925657 EnsemblBacteria:EBMYCT00000003206
EnsemblBacteria:EBMYCT00000071175 GeneID:13319303 GeneID:887888
GeneID:925657 KEGG:mtc:MT2660 KEGG:mtu:Rv2583c KEGG:mtv:RVBD_2583c
PATRIC:18127594 TubercuList:Rv2583c HOGENOM:HOG000018301
ProtClustDB:CLSK791939 Uniprot:P66014
Length = 738
Score = 263 (97.6 bits), Expect = 5.7e-45, Sum P(3) = 5.7e-45
Identities = 54/133 (40%), Positives = 78/133 (58%)
Query: 401 LISTSYIPGMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAI 460
+++T ++ T+ R K +SI+ KM K ++D +R++ + I
Sbjct: 226 IVNTLTASKIKATVEGRPKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDE---------I 276
Query: 461 QCCYSLLDIVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEY 520
+ CY+ + +VH LW P+ G F DYI P+ YQSLHT V GP+G LEVQIRT+ MH
Sbjct: 277 RDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRT 336
Query: 521 AEHGLAAHWLYKE 533
AE+G+AAHW YKE
Sbjct: 337 AEYGIAAHWRYKE 349
Score = 259 (96.2 bits), Expect = 5.7e-45, Sum P(3) = 5.7e-45
Identities = 62/138 (44%), Positives = 85/138 (61%)
Query: 151 TVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLG 210
T+VA +LHD V+D +L ++ EEFG+EV LV GV++L R+ +
Sbjct: 73 TLVAALLHDTVEDTGYTLEALTEEFGEEVGHLVDGVTKLD----------RVVLGSAA-- 120
Query: 211 HEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASR 270
E +R M+ M DPRV++IK+ADRLHNMRT+ LPP K A+ETL + LA R
Sbjct: 121 --EGETIRKMITAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHR 178
Query: 271 LGLWALKAELEDLCFAVL 288
LG+ ++K ELEDL FA+L
Sbjct: 179 LGMASVKWELEDLSFAIL 196
Score = 166 (63.5 bits), Expect = 2.7e-35, Sum P(3) = 2.7e-35
Identities = 39/97 (40%), Positives = 57/97 (58%)
Query: 96 YPIFNDEQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAG 155
YP + +Q+A A + H Q R++GDPY+TH + ILA L G T+VA
Sbjct: 23 YPKADLSILQRAYEVADQRHASQLRQSGDPYITHPLAVANILAEL----GMDTT-TLVAA 77
Query: 156 ILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYI 192
+LHD V+D +L ++ EEFG+EV LV GV++L +
Sbjct: 78 LLHDTVEDTGYTLEALTEEFGEEVGHLVDGVTKLDRV 114
Score = 83 (34.3 bits), Expect = 5.7e-45, Sum P(3) = 5.7e-45
Identities = 22/58 (37%), Positives = 34/58 (58%)
Query: 775 VIVCWPNGEIMRLRSGSTAADAAMKVGLE-GKLVL---VNGQLVLPNTELKDGDIVEV 828
+ V P G+++ L +GST D A V E G + VNG+LV +L++G++VEV
Sbjct: 400 IFVFTPKGDVITLPTGSTPVDFAYAVHTEVGHRCIGARVNGRLVALERKLENGEVVEV 457
>UNIPROTKB|Q9S3S3 [details] [associations]
symbol:relA "PpGpp synthetase I" species:666 "Vibrio
cholerae" [GO:0009267 "cellular response to starvation"
evidence=ISS] InterPro:IPR004811 InterPro:IPR007685 Pfam:PF04607
SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824
SUPFAM:SSF81271 GO:GO:0000166 GenomeReviews:AE003852_GR
GO:GO:0009267 Gene3D:3.10.20.30 InterPro:IPR012675
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0015969
TIGRFAMs:TIGR00691 EMBL:AF175295 PIR:H82074
ProteinModelPortal:Q9S3S3 DNASU:2612993 PATRIC:20083923
ProtClustDB:CLSK874804 Uniprot:Q9S3S3
Length = 738
Score = 316 (116.3 bits), Expect = 5.9e-45, Sum P(3) = 5.9e-45
Identities = 59/132 (44%), Positives = 89/132 (67%)
Query: 409 GMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLD 468
G+ +S R K +YSI+ KM++K + +++D RA+R++ DK +Q CY+ L
Sbjct: 243 GINAEVSGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIA-DK--------LQDCYAALG 293
Query: 469 IVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAH 528
IVH + + EFDDY+ NPKP+GYQS+HT + GP+G +E+QIRT++MHE +E G+AAH
Sbjct: 294 IVHTKYKHLPNEFDDYVANPKPNGYQSIHTVILGPEGKTIEIQIRTKQMHEESELGVAAH 353
Query: 529 WLYKETGNKLQS 540
W YKE + +S
Sbjct: 354 WKYKEGSSAARS 365
Score = 222 (83.2 bits), Expect = 5.9e-45, Sum P(3) = 5.9e-45
Identities = 76/240 (31%), Positives = 119/240 (49%)
Query: 123 GDPYLTHCIHTGR-ILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAK 181
G+P + GR ++ +LI S R T+VA +L + S+EE +G EV K
Sbjct: 47 GNPQGPLLLWRGREMIEILITLSMDRP--TLVAALLFPIATSGVLDNESLEEGYGREVVK 104
Query: 182 LVAGVSRLSYINQLLRRHRRINVNQ-GTLGHEEANDLRVMLLGMVDDPRVVLIKLADRLH 240
L+ GV ++ I QL NV G+ + +++R MLL MVDD R V+IKLA+R+
Sbjct: 105 LIHGVEEMAAIGQL-------NVTMHGSEASAQVDNVRRMLLAMVDDFRCVVIKLAERIC 157
Query: 241 NMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAELEDLCFAVLQMRA--DLASMW 298
N+R + P R A+E I+ LA+RLG+ LK E+ED F Q +A
Sbjct: 158 NLREVKNEPDEVRRVAAKECANIYAPLANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQL 217
Query: 299 SPRNRVGYSRRITTIVSSPPLDERTASDDESFTTFDEHVLSM-KDLLEAVVPFDILSDRR 357
S R R+ + I VS + + + + + +H+ S+ + + + + FD L D R
Sbjct: 218 SER-RIVREQYIRDFVSDLRAEMKQSGINAEVSGRPKHIYSIWRKMQKKSLAFDELFDVR 276
Score = 62 (26.9 bits), Expect = 5.9e-45, Sum P(3) = 5.9e-45
Identities = 28/109 (25%), Positives = 52/109 (47%)
Query: 724 TSMEASINNKVRLLRTMLRWEEQLRSEASLRQSKLGGKANGNPDSVVPGEVVIVCWPNGE 783
++ + + K+ LR +L W+E++ S++ +L S V + V P G+
Sbjct: 361 SAARSGYDEKITWLRKLLDWQEEM-SDSGEMLDELR--------SQVFDDRVYAFTPKGD 411
Query: 784 IMRLRSGSTAADAAMKVGLE-GKLVL---VNGQLVLPNTELKDGDIVEV 828
++ L G+T D A + E G + V G++V +L+ GD VE+
Sbjct: 412 VVDLPMGATPLDFAYHIHSEVGHRCIGAKVAGRIVPFTHKLQMGDQVEI 460
>TIGR_CMR|VC_2451 [details] [associations]
symbol:VC_2451 "GTP pyrophosphokinase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0009267 "cellular response to
starvation" evidence=ISS] InterPro:IPR004811 InterPro:IPR007685
Pfam:PF04607 SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676
Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0000166
GenomeReviews:AE003852_GR GO:GO:0009267 Gene3D:3.10.20.30
InterPro:IPR012675 InterPro:IPR026020 PANTHER:PTHR21262
GO:GO:0015969 TIGRFAMs:TIGR00691 EMBL:AF175295 PIR:H82074
ProteinModelPortal:Q9S3S3 DNASU:2612993 PATRIC:20083923
ProtClustDB:CLSK874804 Uniprot:Q9S3S3
Length = 738
Score = 316 (116.3 bits), Expect = 5.9e-45, Sum P(3) = 5.9e-45
Identities = 59/132 (44%), Positives = 89/132 (67%)
Query: 409 GMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLD 468
G+ +S R K +YSI+ KM++K + +++D RA+R++ DK +Q CY+ L
Sbjct: 243 GINAEVSGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIA-DK--------LQDCYAALG 293
Query: 469 IVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAH 528
IVH + + EFDDY+ NPKP+GYQS+HT + GP+G +E+QIRT++MHE +E G+AAH
Sbjct: 294 IVHTKYKHLPNEFDDYVANPKPNGYQSIHTVILGPEGKTIEIQIRTKQMHEESELGVAAH 353
Query: 529 WLYKETGNKLQS 540
W YKE + +S
Sbjct: 354 WKYKEGSSAARS 365
Score = 222 (83.2 bits), Expect = 5.9e-45, Sum P(3) = 5.9e-45
Identities = 76/240 (31%), Positives = 119/240 (49%)
Query: 123 GDPYLTHCIHTGR-ILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAK 181
G+P + GR ++ +LI S R T+VA +L + S+EE +G EV K
Sbjct: 47 GNPQGPLLLWRGREMIEILITLSMDRP--TLVAALLFPIATSGVLDNESLEEGYGREVVK 104
Query: 182 LVAGVSRLSYINQLLRRHRRINVNQ-GTLGHEEANDLRVMLLGMVDDPRVVLIKLADRLH 240
L+ GV ++ I QL NV G+ + +++R MLL MVDD R V+IKLA+R+
Sbjct: 105 LIHGVEEMAAIGQL-------NVTMHGSEASAQVDNVRRMLLAMVDDFRCVVIKLAERIC 157
Query: 241 NMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAELEDLCFAVLQMRA--DLASMW 298
N+R + P R A+E I+ LA+RLG+ LK E+ED F Q +A
Sbjct: 158 NLREVKNEPDEVRRVAAKECANIYAPLANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQL 217
Query: 299 SPRNRVGYSRRITTIVSSPPLDERTASDDESFTTFDEHVLSM-KDLLEAVVPFDILSDRR 357
S R R+ + I VS + + + + + +H+ S+ + + + + FD L D R
Sbjct: 218 SER-RIVREQYIRDFVSDLRAEMKQSGINAEVSGRPKHIYSIWRKMQKKSLAFDELFDVR 276
Score = 62 (26.9 bits), Expect = 5.9e-45, Sum P(3) = 5.9e-45
Identities = 28/109 (25%), Positives = 52/109 (47%)
Query: 724 TSMEASINNKVRLLRTMLRWEEQLRSEASLRQSKLGGKANGNPDSVVPGEVVIVCWPNGE 783
++ + + K+ LR +L W+E++ S++ +L S V + V P G+
Sbjct: 361 SAARSGYDEKITWLRKLLDWQEEM-SDSGEMLDELR--------SQVFDDRVYAFTPKGD 411
Query: 784 IMRLRSGSTAADAAMKVGLE-GKLVL---VNGQLVLPNTELKDGDIVEV 828
++ L G+T D A + E G + V G++V +L+ GD VE+
Sbjct: 412 VVDLPMGATPLDFAYHIHSEVGHRCIGAKVAGRIVPFTHKLQMGDQVEI 460
>TIGR_CMR|SPO_3203 [details] [associations]
symbol:SPO_3203 "guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase, putative" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0008893 "guanosine-3',5'-bis(diphosphate)
3'-diphosphatase activity" evidence=ISS] [GO:0015968 "stringent
response" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016787
Gene3D:3.10.20.30 InterPro:IPR012675 KO:K01139 InterPro:IPR026020
PANTHER:PTHR21262 GO:GO:0015969 TIGRFAMs:TIGR00691
HOGENOM:HOG000018299 OMA:RAYFYAE RefSeq:YP_168406.1
ProteinModelPortal:Q5LNK1 GeneID:3193258 KEGG:sil:SPO3203
PATRIC:23379853 ProtClustDB:CLSK934090 Uniprot:Q5LNK1
Length = 730
Score = 276 (102.2 bits), Expect = 2.4e-43, Sum P(3) = 2.4e-43
Identities = 63/168 (37%), Positives = 96/168 (57%)
Query: 409 GMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLD 468
G+E + R K YSI+ KM+ KD G ++ D R++ TL + + CY L
Sbjct: 248 GIEAEVFGRAKKPYSIWRKMQEKDQGFSRLSDIYGFRII------TL---SEEDCYRTLG 298
Query: 469 IVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAH 528
+H+ W + G F DYI PK +GY+S+HT V G DG +EVQIRT++MH+ AE G+AAH
Sbjct: 299 AIHQRWRAVPGRFKDYISQPKSNGYRSIHTTVSGRDGKRVEVQIRTRQMHDVAETGVAAH 358
Query: 529 WLYKETGNKLQSISSMDESDIEASSSLSKDTD-DHNP-LDTDLFQKYS 574
W Y++ G + Q+ ++D + A + D++ DH L+ + YS
Sbjct: 359 WSYRD-GVRTQNPFAVDPAKWIAGLTEQFDSEEDHEDFLEAVKLEMYS 405
Score = 260 (96.6 bits), Expect = 2.4e-43, Sum P(3) = 2.4e-43
Identities = 59/138 (42%), Positives = 85/138 (61%)
Query: 151 TVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLG 210
T++ +LHD ++D S G + E FG+EVA LV GV++L+ + QL R +
Sbjct: 85 TIITALLHDTIEDTKASYGQVSELFGEEVAMLVDGVTKLTNL-QLSSRETK--------- 134
Query: 211 HEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASR 270
+A + R + + M D RV+L+KLADRLHNMRTI A+ P K A+ET+ I+ LA R
Sbjct: 135 --QAENFRKLFMAMSKDLRVILVKLADRLHNMRTIKAMRPEKQAVKARETMDIYAPLAGR 192
Query: 271 LGLWALKAELEDLCFAVL 288
+G+ ++ ELEDL F VL
Sbjct: 193 MGMQWMREELEDLAFRVL 210
Score = 200 (75.5 bits), Expect = 4.2e-37, Sum P(3) = 4.2e-37
Identities = 50/136 (36%), Positives = 76/136 (55%)
Query: 93 VTGY-PIFNDEQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVD- 150
V Y P N E++ +A F ++ H GQFR +G+PY TH + IL + +R D
Sbjct: 31 VRNYNPKTNAERITRAYEFGQQMHDGQFRHSGEPYFTHPVAVAAIL------TEQRLDDA 84
Query: 151 TVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLG 210
T++ +LHD ++D S G + E FG+EVA LV GV++L+ + QL R + N L
Sbjct: 85 TIITALLHDTIEDTKASYGQVSELFGEEVAMLVDGVTKLTNL-QLSSRETKQAENFRKLF 143
Query: 211 HEEANDLRVMLLGMVD 226
+ DLRV+L+ + D
Sbjct: 144 MAMSKDLRVILVKLAD 159
Score = 52 (23.4 bits), Expect = 2.4e-43, Sum P(3) = 2.4e-43
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 776 IVCW-PNGEIMRLRSGSTAADAAMKVGLE-GKLVL---VNGQLVLPNTELKDGDIVEV 828
+ C+ P G++++L G+T D A + G + V+G V T LK+G V+V
Sbjct: 408 VFCFTPKGDVVKLPRGATPIDYAYAIHTRIGHACVGAKVDGIRVPLWTRLKNGQSVDV 465
>TIGR_CMR|SO_3455 [details] [associations]
symbol:SO_3455 "GTP pyrophosphokinase" species:211586
"Shewanella oneidensis MR-1" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0009267 "cellular response to
starvation" evidence=ISS] InterPro:IPR004811 InterPro:IPR007685
Pfam:PF04607 SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676
Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0000166 GO:GO:0016301
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.10.20.30
InterPro:IPR012675 InterPro:IPR026020 PANTHER:PTHR21262
HOGENOM:HOG000018300 KO:K00951 OMA:HRADCDQ GO:GO:0008728
GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:NP_719004.1
ProteinModelPortal:Q8EBQ4 GeneID:1171131 KEGG:son:SO_3455
PATRIC:23526606 ProtClustDB:CLSK907176 Uniprot:Q8EBQ4
Length = 735
Score = 314 (115.6 bits), Expect = 1.0e-41, Sum P(3) = 1.0e-41
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 417 RLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLDIVHRLWIP 476
R K +YSI+ KM+ K + +++D RA+R+V +Q CY L +VH LW
Sbjct: 251 RPKHIYSIWRKMKGKHLKFDELFDVRAVRIVT---------ERLQDCYGALGVVHTLWHH 301
Query: 477 IDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAHWLYKETGN 536
I EFDDY+ NPKP+GYQS+HT V GP+G +E+QIRTQ MHE AE G+AAHW YKE GN
Sbjct: 302 IPREFDDYVANPKPNGYQSIHTVVVGPEGKTVEIQIRTQDMHEDAELGVAAHWKYKE-GN 360
Query: 537 KLQSISSMDE 546
S +E
Sbjct: 361 HSGKQSGYEE 370
Score = 188 (71.2 bits), Expect = 1.0e-41, Sum P(3) = 1.0e-41
Identities = 54/157 (34%), Positives = 88/157 (56%)
Query: 132 HTGRILAMLIPSSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSY 191
H ++ +L P + ++T+ A IL V D + +I+E+FG+ +A+LVA V ++
Sbjct: 57 HAREMIEILAPLN--MDIETLQAAILFVVFDAGLLNEEAIKEKFGEPLARLVASVVTMNA 114
Query: 192 INQLLRRHRRINVNQGTLGHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPA 251
I L +IN N + + +++R MLL MV+D R V+IKLA+R+ +R +
Sbjct: 115 IGAL-----KINPNSRST-EPQIDNIRRMLLAMVEDVRAVVIKLAERVCLLRAVKNADEE 168
Query: 252 KARAVAQETLLIWCSLASRLGLWALKAELEDLCFAVL 288
+A+E I+ LA+RLG+ LK ELED+ F L
Sbjct: 169 TRVLLAREIADIYAPLANRLGIGQLKWELEDISFRYL 205
Score = 67 (28.6 bits), Expect = 1.0e-41, Sum P(3) = 1.0e-41
Identities = 27/106 (25%), Positives = 51/106 (48%)
Query: 727 EASINNKVRLLRTMLRWEEQLRSEASLRQSKLGGKANGNPDSVVPGEVVIVCWPNGEIMR 786
++ K+ LR +L+W+E + +L + S V + V V P+GE++
Sbjct: 365 QSGYEEKINWLRKILQWQEDVVESGNLVEEVR---------SQVFEDRVYVFTPSGEVVD 415
Query: 787 LRSGSTAADAAM----KVGLEGKLVLVNGQLVLPNTELKDGDIVEV 828
L GST D A +VG + V+G++V +++ G+ +E+
Sbjct: 416 LPLGSTVLDFAYYIHSQVGHKCIGAKVDGRIVPFTYQVETGERIEI 461
>UNIPROTKB|P0AG24 [details] [associations]
symbol:spoT "guanosine 3'-diphosphate 5'-triphosphate
3'-diphosphatase [multifunctional]" species:83333 "Escherichia coli
K-12" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008081
"phosphoric diester hydrolase activity" evidence=IEA] [GO:0015970
"guanosine tetraphosphate biosynthetic process" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0015969 "guanosine tetraphosphate metabolic
process" evidence=IEA;IMP] [GO:0008728 "GTP diphosphokinase
activity" evidence=IEA] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IEA;IDA] [GO:0042594 "response to starvation"
evidence=IMP] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR006674 InterPro:IPR007685 Pfam:PF01966 Pfam:PF04607
SMART:SM00471 SMART:SM00954 UniPathway:UPA00908 InterPro:IPR004095
InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0016301 EMBL:L10328
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015949 GO:GO:0008081
GO:GO:0015970 eggNOG:COG0317 KO:K01139 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0008728
TIGRFAMs:TIGR00691 EMBL:M24503 PIR:B30374 RefSeq:NP_418107.1
RefSeq:YP_491784.1 ProteinModelPortal:P0AG24 SMR:P0AG24
DIP:DIP-29378N IntAct:P0AG24 MINT:MINT-1219858 PRIDE:P0AG24
EnsemblBacteria:EBESCT00000003824 EnsemblBacteria:EBESCT00000015853
GeneID:12930367 GeneID:948159 KEGG:ecj:Y75_p3524 KEGG:eco:b3650
PATRIC:32122787 EchoBASE:EB0959 EcoGene:EG10966
HOGENOM:HOG000018299 OMA:RAYFYAE ProtClustDB:PRK11092
BioCyc:EcoCyc:SPOT-MONOMER BioCyc:ECOL316407:JW3625-MONOMER
BioCyc:MetaCyc:SPOT-MONOMER Genevestigator:P0AG24 Uniprot:P0AG24
Length = 702
Score = 267 (99.0 bits), Expect = 1.1e-41, Sum P(3) = 1.1e-41
Identities = 58/127 (45%), Positives = 75/127 (59%)
Query: 409 GMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLD 468
G+ +S R K LYSI+ KM K+ H + D A RV+V D + CY +L
Sbjct: 228 GIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSD---------TCYRVLG 278
Query: 469 IVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAH 528
+H L+ P G DYI PK +GYQSLHT++ GP G +EVQIRT+ M + AE G+AAH
Sbjct: 279 QMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMGVAAH 338
Query: 529 WLYKETG 535
W YKE G
Sbjct: 339 WAYKEHG 345
Score = 258 (95.9 bits), Expect = 1.1e-41, Sum P(3) = 1.1e-41
Identities = 61/139 (43%), Positives = 89/139 (64%)
Query: 150 DTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTL 209
+T++A +LHDV++D + +E+ FG VA+LV GVS+L ++L R ++
Sbjct: 64 ETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSKL---DKLKFRDKK-------- 112
Query: 210 GHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLAS 269
+A + R M++ MV D RV+LIKLADR HNMRT+ +L P K R +A+ETL I+ LA
Sbjct: 113 -EAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAH 171
Query: 270 RLGLWALKAELEDLCFAVL 288
RLG+ +K ELE+L F L
Sbjct: 172 RLGIHHIKTELEELGFEAL 190
Score = 166 (63.5 bits), Expect = 3.9e-32, Sum P(3) = 3.9e-32
Identities = 40/125 (32%), Positives = 71/125 (56%)
Query: 102 EQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVV 161
+++++A A+ AH GQ R +G+PY+TH + ILA + K +T++A +LHDV+
Sbjct: 21 KRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEM-----KLDYETLMAALLHDVI 75
Query: 162 DDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHEEANDLRVML 221
+D + +E+ FG VA+LV GVS+L + ++ + N + D+RV+L
Sbjct: 76 EDTPATYQDMEQLFGKSVAELVEGVSKLDKLKFRDKKEAQAE-NFRKMIMAMVQDIRVIL 134
Query: 222 LGMVD 226
+ + D
Sbjct: 135 IKLAD 139
Score = 47 (21.6 bits), Expect = 1.1e-41, Sum P(3) = 1.1e-41
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 771 PGEVVIVCWPNGEIMRLRSGSTAADAAMKV 800
P E+ + P G I+ L +G+T D A V
Sbjct: 385 PDEIYVFT-PEGRIVELPAGATPVDFAYAV 413
>TIGR_CMR|SO_0359 [details] [associations]
symbol:SO_0359 "guanosine-3,5-bis(diphosphate)
3-pyrophosphohydrolase" species:211586 "Shewanella oneidensis MR-1"
[GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=ISS] [GO:0009267 "cellular response to
starvation" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
GO:GO:0016301 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.10.20.30 InterPro:IPR012675 KO:K01139 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0008728 GO:GO:0015969
TIGRFAMs:TIGR00691 HOGENOM:HOG000018299 OMA:RAYFYAE
ProtClustDB:PRK11092 RefSeq:NP_715999.1 ProteinModelPortal:Q8EJU8
GeneID:1168236 KEGG:son:SO_0359 PATRIC:23520423 Uniprot:Q8EJU8
Length = 701
Score = 267 (99.0 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 65/169 (38%), Positives = 98/169 (57%)
Query: 409 GMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLD 468
G++ + R K+LYSI++KM+ K++ +V D A RV+V +I CY +L
Sbjct: 228 GIKGKVKGREKNLYSIYNKMQSKELQFQEVMDIYAFRVIVD---------SIDTCYRVLG 278
Query: 469 IVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAH 528
+H L+ P G F DYI PK +GYQSLHT++ GP G +E+QIRT+ M + A+ G+AAH
Sbjct: 279 AMHGLYKPRPGRFKDYIAIPKANGYQSLHTSLFGPHGVPVEIQIRTEDMDQMADKGVAAH 338
Query: 529 WLYK---ETGN----KLQSISSMDESDIEASSSLSKDTDDHNPLDTDLF 570
W YK ETG ++++ M +S +E S S + + T+LF
Sbjct: 339 WAYKGGAETGQGTTTQVRARKWM-QSLLELQQSASTSFEFVENVKTELF 386
Score = 260 (96.6 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 62/143 (43%), Positives = 90/143 (62%)
Query: 150 DTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTL 209
+T++A +LHD ++D + + E FG+ VA+LV GVS+L ++L R ++
Sbjct: 64 ETLMAALLHDTIEDTYVTKEDLAERFGESVAELVEGVSKL---DKLKFRDKK-------- 112
Query: 210 GHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLAS 269
+A + R M++ M D RV+LIKLADR HNMRT+ AL P K R +A+ETL I+ +A+
Sbjct: 113 -EAQAENFRKMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIAN 171
Query: 270 RLGLWALKAELEDLCF-AVLQMR 291
RLG+ +K ELEDL F A MR
Sbjct: 172 RLGIHNIKTELEDLGFQAYYPMR 194
Score = 174 (66.3 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 43/144 (29%), Positives = 77/144 (53%)
Query: 86 FIVDGVDVTGYPIFNDEQVQ---KAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIP 142
++ +G+ + EQV+ +A A+ AH GQ R +G+PY+TH + RILA +
Sbjct: 2 YLFEGLKESASGYLEPEQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEM-- 59
Query: 143 SSGKRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRI 202
+ +T++A +LHD ++D + + E FG+ VA+LV GVS+L + ++ +
Sbjct: 60 ---RLDHETLMAALLHDTIEDTYVTKEDLAERFGESVAELVEGVSKLDKLKFRDKKEAQA 116
Query: 203 NVNQGTLGHEEANDLRVMLLGMVD 226
N + D+RV+L+ + D
Sbjct: 117 E-NFRKMMMAMTQDIRVILIKLAD 139
Score = 52 (23.4 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 739 TMLRWEEQLRSEASLRQS-KLGGKANGNPDSVVPGEVVIVCWPNGEIMRLRSGSTAADAA 797
T +R + ++S L+QS + N + + E + V P G I+ L +TA D A
Sbjct: 353 TQVRARKWMQSLLELQQSASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFA 412
Query: 798 MKVGLE-GKLVL---VNGQLVLPNTELKDGDIVEV 828
+V + G + VN Q + L G VE+
Sbjct: 413 YEVHTDVGNTCVGARVNRQAYPLSQPLISGQTVEI 447
>UNIPROTKB|P0AG20 [details] [associations]
symbol:relA "GDP pyrophosphokinase / GTP pyrophosphokinase"
species:83333 "Escherichia coli K-12" [GO:0016597 "amino acid
binding" evidence=IEA] [GO:0015970 "guanosine tetraphosphate
biosynthetic process" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0015969 "guanosine tetraphosphate metabolic process"
evidence=IEA;IMP] [GO:0008728 "GTP diphosphokinase activity"
evidence=IEA;IDA] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IPI] InterPro:IPR002912 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF01842 Pfam:PF04607 SMART:SM00954
UniPathway:UPA00908 GO:GO:0005525 InterPro:IPR004095
InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016597 GO:GO:0016301
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015949 EMBL:U29580
GO:GO:0015970 EMBL:J04039 eggNOG:COG0317 InterPro:IPR026020
PANTHER:PTHR21262 PIR:D65060 RefSeq:NP_417264.1 RefSeq:YP_490992.1
ProteinModelPortal:P0AG20 SMR:P0AG20 IntAct:P0AG20 PRIDE:P0AG20
EnsemblBacteria:EBESCT00000002092 EnsemblBacteria:EBESCT00000002093
EnsemblBacteria:EBESCT00000014610 GeneID:12930232 GeneID:947244
KEGG:ecj:Y75_p2721 KEGG:eco:b2784 PATRIC:32120984 EchoBASE:EB0828
EcoGene:EG10835 HOGENOM:HOG000018300 KO:K00951 OMA:HRADCDQ
ProtClustDB:PRK10872 BioCyc:EcoCyc:RELA-MONOMER
BioCyc:ECOL316407:JW2755-MONOMER BioCyc:MetaCyc:RELA-MONOMER
ChEMBL:CHEMBL1163114 Genevestigator:P0AG20 GO:GO:0008728
GO:GO:0015969 TIGRFAMs:TIGR00691 Uniprot:P0AG20
Length = 744
Score = 302 (111.4 bits), Expect = 4.9e-41, Sum P(3) = 4.9e-41
Identities = 58/125 (46%), Positives = 84/125 (67%)
Query: 409 GMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLD 468
G++ + R K +YSI+ KM++K++ +++D RA+R+V +Q CY+ L
Sbjct: 244 GVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVA---------ERLQDCYAALG 294
Query: 469 IVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAH 528
IVH + + EFDDY+ NPKP+GYQS+HT V GP G +E+QIRT++MHE AE G+AAH
Sbjct: 295 IVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAH 354
Query: 529 WLYKE 533
W YKE
Sbjct: 355 WKYKE 359
Score = 198 (74.8 bits), Expect = 4.9e-41, Sum P(3) = 4.9e-41
Identities = 51/140 (36%), Positives = 76/140 (54%)
Query: 149 VDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGT 208
+DT+ A +L + D S + E G V L+ GV ++ I QL H +
Sbjct: 73 IDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHT------DS 126
Query: 209 LGHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLA 268
+ E+ +++R MLL MVDD R V+IKLA+R+ ++R + P + A+E I+ LA
Sbjct: 127 VSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLA 186
Query: 269 SRLGLWALKAELEDLCFAVL 288
+RLG+ LK ELED CF L
Sbjct: 187 NRLGIGQLKWELEDYCFRYL 206
Score = 64 (27.6 bits), Expect = 4.9e-41, Sum P(3) = 4.9e-41
Identities = 24/101 (23%), Positives = 48/101 (47%)
Query: 732 NKVRLLRTMLRWEEQLRSEASLRQSKLGGKANGNPDSVVPGEVVIVCWPNGEIMRLRSGS 791
+++ LR ++ W+E++ G+ S V + V V P G+++ L +GS
Sbjct: 372 DRIAWLRKLIAWQEEMADS---------GEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGS 422
Query: 792 TAADAAMKVGLE-GKLVL---VNGQLVLPNTELKDGDIVEV 828
T D A + + G + + G++V +L+ GD +E+
Sbjct: 423 TPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEI 463
>UNIPROTKB|Q9KNM2 [details] [associations]
symbol:spoT "Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase" species:243277 "Vibrio cholerae O1 biovar
El Tor str. N16961" [GO:0009267 "cellular response to starvation"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
UniPathway:UPA00908 InterPro:IPR004095 InterPro:IPR012676
Pfam:PF02824 SUPFAM:SSF81271 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0009267 Gene3D:3.10.20.30
InterPro:IPR012675 GO:GO:0015970 HSSP:Q54089 eggNOG:COG0317
KO:K01139 GO:GO:0008893 InterPro:IPR026020 PANTHER:PTHR21262
TIGRFAMs:TIGR00691 OMA:RAYFYAE ProtClustDB:PRK11092 PIR:B82044
RefSeq:NP_232337.1 ProteinModelPortal:Q9KNM2 DNASU:2615538
GeneID:2615538 KEGG:vch:VC2710 PATRIC:20084438 Uniprot:Q9KNM2
Length = 705
Score = 255 (94.8 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 63/167 (37%), Positives = 89/167 (53%)
Query: 409 GMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLD 468
G+ + R K+L+SI++KM+ K+ H + D A R+VV D T CY +L
Sbjct: 228 GLPARVVGREKNLFSIYNKMKTKEQRFHTIMDIYAFRIVV-DTADT--------CYRVLG 278
Query: 469 IVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAH 528
VH L+ P DYI PK +GYQSLHT++ GP G +EVQIRT+ M + A+ G+AAH
Sbjct: 279 QVHSLYKPRPARMKDYIAVPKANGYQSLHTSMVGPHGVPVEVQIRTEDMDQMADKGVAAH 338
Query: 529 WLYK---ETGNKLQSISSMD--ESDIEASSSLSKDTDDHNPLDTDLF 570
W YK E G I + +S +E S + + +DLF
Sbjct: 339 WSYKANSERGGTTAQIKAQRWMQSLLELQQSAGNSFEFIENVKSDLF 385
Score = 250 (93.1 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 62/140 (44%), Positives = 87/140 (62%)
Query: 149 VDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGT 208
++T+ A +LHDV++D + ++ FG VA+LV GVS+L ++L R R+
Sbjct: 63 LETLQAALLHDVIEDCDVTKEDLDAHFGSSVAELVDGVSKL---DKLKFRDRK------- 112
Query: 209 LGHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLA 268
+A + R M+L MV D RV+LIKLADR NMRT+ AL P K R +A+ETL I+ LA
Sbjct: 113 --EAQAENFRKMVLAMVQDIRVILIKLADRTPNMRTLGALRPDKKRRIARETLEIYAPLA 170
Query: 269 SRLGLWALKAELEDLCFAVL 288
RLG+ +K ELE+L F L
Sbjct: 171 HRLGIHNIKTELEELGFEAL 190
Score = 164 (62.8 bits), Expect = 3.5e-31, Sum P(3) = 3.5e-31
Identities = 40/126 (31%), Positives = 71/126 (56%)
Query: 102 EQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVV 161
E ++++ A+ AH GQ R +G+PY+ H + RILA + + ++T+ A +LHDV+
Sbjct: 21 EALRQSYVVARDAHEGQTRSSGEPYIIHPVAVARILAEM-----RLDLETLQAALLHDVI 75
Query: 162 DDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRI-NVNQGTLGHEEANDLRVM 220
+D + ++ FG VA+LV GVS+L + R+ + N + L + D+RV+
Sbjct: 76 EDCDVTKEDLDAHFGSSVAELVDGVSKLDKLKFRDRKEAQAENFRKMVLAMVQ--DIRVI 133
Query: 221 LLGMVD 226
L+ + D
Sbjct: 134 LIKLAD 139
Score = 53 (23.7 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 771 PGEVVIVCWPNGEIMRLRSGSTAADAAMKVGLEGKLVLVNGQL---VLPNTE-LKDGDIV 826
P E+ + P G I+ L G+TA D A V + V ++ P ++ LK G V
Sbjct: 386 PDEIYVFT-PKGRIVELPMGATAVDFAYAVHTDIGNTCVGARVDRTPYPLSQSLKSGQTV 444
Query: 827 EV 828
E+
Sbjct: 445 EI 446
Score = 43 (20.2 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 24/91 (26%), Positives = 38/91 (41%)
Query: 324 ASDDESFTTFDEHVLSMKDLLEAVVPFDILS---DRRK--RTKFLHDLAKSSEAQKKAKV 378
A ++ S D + SM DLL A+ +++S RR L + +KS + K +
Sbjct: 504 APENISKVLSDLKIASMDDLLAAIGLGELMSIVIARRLLGNADELTEPSKSGGNKNKLPI 563
Query: 379 VQDAGIALTSLVACEEALEKELLISTSYIPG 409
GI LT C + ++ S PG
Sbjct: 564 RGAEGILLTFANCCHPIPDDHIIAHVS--PG 592
>TIGR_CMR|VC_2710 [details] [associations]
symbol:VC_2710 "guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase" species:686 "Vibrio cholerae O1 biovar El
Tor" [GO:0009267 "cellular response to starvation" evidence=ISS]
InterPro:IPR003607 InterPro:IPR004811 InterPro:IPR007685
Pfam:PF04607 SMART:SM00471 SMART:SM00954 UniPathway:UPA00908
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009267
Gene3D:3.10.20.30 InterPro:IPR012675 GO:GO:0015970 HSSP:Q54089
eggNOG:COG0317 KO:K01139 GO:GO:0008893 InterPro:IPR026020
PANTHER:PTHR21262 TIGRFAMs:TIGR00691 OMA:RAYFYAE
ProtClustDB:PRK11092 PIR:B82044 RefSeq:NP_232337.1
ProteinModelPortal:Q9KNM2 DNASU:2615538 GeneID:2615538
KEGG:vch:VC2710 PATRIC:20084438 Uniprot:Q9KNM2
Length = 705
Score = 255 (94.8 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 63/167 (37%), Positives = 89/167 (53%)
Query: 409 GMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLD 468
G+ + R K+L+SI++KM+ K+ H + D A R+VV D T CY +L
Sbjct: 228 GLPARVVGREKNLFSIYNKMKTKEQRFHTIMDIYAFRIVV-DTADT--------CYRVLG 278
Query: 469 IVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAH 528
VH L+ P DYI PK +GYQSLHT++ GP G +EVQIRT+ M + A+ G+AAH
Sbjct: 279 QVHSLYKPRPARMKDYIAVPKANGYQSLHTSMVGPHGVPVEVQIRTEDMDQMADKGVAAH 338
Query: 529 WLYK---ETGNKLQSISSMD--ESDIEASSSLSKDTDDHNPLDTDLF 570
W YK E G I + +S +E S + + +DLF
Sbjct: 339 WSYKANSERGGTTAQIKAQRWMQSLLELQQSAGNSFEFIENVKSDLF 385
Score = 250 (93.1 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 62/140 (44%), Positives = 87/140 (62%)
Query: 149 VDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGT 208
++T+ A +LHDV++D + ++ FG VA+LV GVS+L ++L R R+
Sbjct: 63 LETLQAALLHDVIEDCDVTKEDLDAHFGSSVAELVDGVSKL---DKLKFRDRK------- 112
Query: 209 LGHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLA 268
+A + R M+L MV D RV+LIKLADR NMRT+ AL P K R +A+ETL I+ LA
Sbjct: 113 --EAQAENFRKMVLAMVQDIRVILIKLADRTPNMRTLGALRPDKKRRIARETLEIYAPLA 170
Query: 269 SRLGLWALKAELEDLCFAVL 288
RLG+ +K ELE+L F L
Sbjct: 171 HRLGIHNIKTELEELGFEAL 190
Score = 164 (62.8 bits), Expect = 3.5e-31, Sum P(3) = 3.5e-31
Identities = 40/126 (31%), Positives = 71/126 (56%)
Query: 102 EQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVV 161
E ++++ A+ AH GQ R +G+PY+ H + RILA + + ++T+ A +LHDV+
Sbjct: 21 EALRQSYVVARDAHEGQTRSSGEPYIIHPVAVARILAEM-----RLDLETLQAALLHDVI 75
Query: 162 DDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRI-NVNQGTLGHEEANDLRVM 220
+D + ++ FG VA+LV GVS+L + R+ + N + L + D+RV+
Sbjct: 76 EDCDVTKEDLDAHFGSSVAELVDGVSKLDKLKFRDRKEAQAENFRKMVLAMVQ--DIRVI 133
Query: 221 LLGMVD 226
L+ + D
Sbjct: 134 LIKLAD 139
Score = 53 (23.7 bits), Expect = 4.0e-40, Sum P(3) = 4.0e-40
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 771 PGEVVIVCWPNGEIMRLRSGSTAADAAMKVGLEGKLVLVNGQL---VLPNTE-LKDGDIV 826
P E+ + P G I+ L G+TA D A V + V ++ P ++ LK G V
Sbjct: 386 PDEIYVFT-PKGRIVELPMGATAVDFAYAVHTDIGNTCVGARVDRTPYPLSQSLKSGQTV 444
Query: 827 EV 828
E+
Sbjct: 445 EI 446
Score = 43 (20.2 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 24/91 (26%), Positives = 38/91 (41%)
Query: 324 ASDDESFTTFDEHVLSMKDLLEAVVPFDILS---DRRK--RTKFLHDLAKSSEAQKKAKV 378
A ++ S D + SM DLL A+ +++S RR L + +KS + K +
Sbjct: 504 APENISKVLSDLKIASMDDLLAAIGLGELMSIVIARRLLGNADELTEPSKSGGNKNKLPI 563
Query: 379 VQDAGIALTSLVACEEALEKELLISTSYIPG 409
GI LT C + ++ S PG
Sbjct: 564 RGAEGILLTFANCCHPIPDDHIIAHVS--PG 592
>TIGR_CMR|CBU_0303 [details] [associations]
symbol:CBU_0303 "guanosine-3,5-bis(diphosphate)
3-pyrophosphohydrolase" species:227377 "Coxiella burnetii RSA 493"
[GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=ISS] [GO:0009267 "cellular response to
starvation" evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
GO:GO:0016301 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:3.10.20.30 InterPro:IPR012675 KO:K01139 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0008728 GO:GO:0015969
TIGRFAMs:TIGR00691 HOGENOM:HOG000018299 OMA:RAYFYAE
RefSeq:NP_819346.1 ProteinModelPortal:Q820X2 GeneID:1208185
KEGG:cbu:CBU_0303 PATRIC:17929301 ProtClustDB:CLSK913970
BioCyc:CBUR227377:GJ7S-310-MONOMER Uniprot:Q820X2
Length = 707
Score = 283 (104.7 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
Identities = 69/175 (39%), Positives = 93/175 (53%)
Query: 396 LEKELLISTSYIPGMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTL 455
+EK L + + T++ R K LYSI+ KMR K + +++ D A RV+V D
Sbjct: 215 IEKTLHVGLNQSRLSSYTITGREKHLYSIYRKMRNKHIPFNEIMDVYAFRVIVED----- 269
Query: 456 HGPAIQCCYSLLDIVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQ 515
+ CY L I+H L+ P+ F DYI PK +GYQSLHT + GP G +EVQIRT
Sbjct: 270 ----VDSCYRALGIIHGLFKPVPERFKDYIAIPKANGYQSLHTTLFGPYGLPVEVQIRTT 325
Query: 516 KMHEYAEHGLAAHWLYKETGNKLQSISSMDESDIEASS----SLSKDTDDHNPLD 566
+M A G+AAHWLYK T + M ES + A + L D NPL+
Sbjct: 326 EMDRMATKGIAAHWLYKTTD------APMTESQVRAKAWVKNLLELQEDAANPLE 374
Score = 266 (98.7 bits), Expect = 9.1e-22, Sum P(2) = 9.1e-22
Identities = 73/214 (34%), Positives = 115/214 (53%)
Query: 146 KRAVDTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVN 205
K T++A +LHDV++D +I E+FG+EVA+LV GVS+L+ I + R
Sbjct: 59 KMDYQTIMAALLHDVIEDTPVEKKAIAEKFGEEVAELVDGVSKLTQIEFVSR-------- 110
Query: 206 QGTLGHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWC 265
+A R M+L M D RV+++KLADRLHNMRT+ +L K R +A+ETL I+
Sbjct: 111 ----AEAQAESFRKMVLAMARDIRVIIVKLADRLHNMRTLGSLHSQKRRRIARETLDIFA 166
Query: 266 SLASRLGLWALKAELEDLCFAVLQMRADLASMWSPRNRVGYSRRITTIVSSP---PLDER 322
+ RLG+ L ELE+L FA L A + R G ++I ++ L++
Sbjct: 167 PIGKRLGMRELSVELEELGFAALYPLRHRALKDAVRRTRGNRKKILALIEKTLHVGLNQS 226
Query: 323 TASDDESFTTFDEHVLSM-KDLLEAVVPFDILSD 355
S + T ++H+ S+ + + +PF+ + D
Sbjct: 227 RLSS-YTITGREKHLYSIYRKMRNKHIPFNEIMD 259
Score = 183 (69.5 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
Identities = 48/143 (33%), Positives = 80/143 (55%)
Query: 102 EQVQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVV 161
E +++A A AH Q R+TG+PY+ H + ILA L K T++A +LHDV+
Sbjct: 20 ESIRQAYLMAFSAHRAQKRRTGEPYINHPVAVAGILADL-----KMDYQTIMAALLHDVI 74
Query: 162 DDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRI-NVNQGTLGHEEANDLRVM 220
+D +I E+FG+EVA+LV GVS+L+ I + R + + + L A D+RV+
Sbjct: 75 EDTPVEKKAIAEKFGEEVAELVDGVSKLTQIEFVSRAEAQAESFRKMVLAM--ARDIRVI 132
Query: 221 LLGMVDDPRVVLIKLADRLHNMR 243
++ + D R+ ++ LH+ +
Sbjct: 133 IVKLAD--RLHNMRTLGSLHSQK 153
Score = 71 (30.1 bits), Expect = 3.5e-38, Sum P(3) = 3.5e-38
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 771 PGEVVIVCWPNGEIMRLRSGSTAADAAMKVGLE-GK---LVLVNGQLVLPNTELKDGDIV 826
P EV + P GEIM L +G+TA D A V + G V ++ L +T L +G V
Sbjct: 385 PDEVYVFT-PRGEIMELPAGATAIDFAYAVHTDVGNNCVAVKIDRHLAPLSTPLVNGQTV 443
Query: 827 EV 828
EV
Sbjct: 444 EV 445
Score = 42 (19.8 bits), Expect = 3.6e-35, Sum P(3) = 3.6e-35
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 741 LRWEEQLRSE 750
LRW EQ+R+E
Sbjct: 620 LRWSEQVRAE 629
Score = 39 (18.8 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 363 LHDLAKSSEAQKKAKVVQDAGIALTSLV 390
LHD+ + + +KKA + + G + LV
Sbjct: 70 LHDVIEDTPVEKKA-IAEKFGEEVAELV 96
>TIGR_CMR|CPS_4115 [details] [associations]
symbol:CPS_4115 "GTP pyrophosphokinase" species:167879
"Colwellia psychrerythraea 34H" [GO:0008728 "GTP diphosphokinase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR004811 InterPro:IPR007685 Pfam:PF04607
SMART:SM00954 InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824
SUPFAM:SSF81271 GO:GO:0000166 GO:GO:0016301 EMBL:CP000083
GenomeReviews:CP000083_GR Gene3D:3.10.20.30 InterPro:IPR012675
eggNOG:COG0317 InterPro:IPR026020 PANTHER:PTHR21262
HOGENOM:HOG000018300 KO:K00951 OMA:HRADCDQ GO:GO:0008728
GO:GO:0015969 TIGRFAMs:TIGR00691 RefSeq:YP_270770.1
ProteinModelPortal:Q47WQ2 STRING:Q47WQ2 DNASU:3518529
GeneID:3518529 KEGG:cps:CPS_4115 PATRIC:21471093
BioCyc:CPSY167879:GI48-4128-MONOMER Uniprot:Q47WQ2
Length = 737
Score = 292 (107.8 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 62/130 (47%), Positives = 86/130 (66%)
Query: 417 RLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAIQCCYSLLDIVHRLWIP 476
R K ++SI+ KM++K + +++D RA+RVVV +K +Q CYS L IVH W
Sbjct: 252 RPKHIFSIWKKMQQKSLDFDQLFDVRAVRVVV-EK--------VQDCYSALGIVHTEWQH 302
Query: 477 IDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQKMHEYAEHGLAAHWLYKETGN 536
I EF DY+ PK +GYQS+HT V GP+G ++EVQIRT++M + AE G+AAHW YKE GN
Sbjct: 303 IAKEFSDYVATPKANGYQSIHTVVLGPEGKSVEVQIRTKQMDDDAELGVAAHWRYKE-GN 361
Query: 537 KLQSISSMDE 546
+S D+
Sbjct: 362 ASGKSNSFDD 371
Score = 169 (64.5 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 58/211 (27%), Positives = 105/211 (49%)
Query: 150 DTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTL 209
D++VA + ++ + + ++E F ++ L GV +++ I + LR+ + +Q
Sbjct: 72 DSLVAAFISPLLANDIIEIEFVKEHFSKDILMLCQGVEQMAAI-KALRQQSSQSSDQAP- 129
Query: 210 GHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLAS 269
+ +++R MLL MVDD R V+IKLA+RL ++R VA+E+ I+ LA+
Sbjct: 130 --QNIDNIRRMLLAMVDDVRAVVIKLAERLCDLREKKNSDEETRVLVAKESANIYAPLAN 187
Query: 270 RLGLWALKAELEDLCFAVL--QMRADLASMWSPRNRVGYSRRITTIVSSPPLDERTASDD 327
RLG+ LK ELED+ F L Q+ +A + R+ + + + V + +
Sbjct: 188 RLGIGQLKWELEDISFRYLHPQVYKKIAKLLD-ETRLEREQYMASFVGHLNSELNALAIK 246
Query: 328 ESFTTFDEHVLSM-KDLLEAVVPFDILSDRR 357
+H+ S+ K + + + FD L D R
Sbjct: 247 GEVYGRPKHIFSIWKKMQQKSLDFDQLFDVR 277
Score = 62 (26.9 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 729 SINNKVRLLRTMLRWEEQLRSEASLRQSKLGGKANGNPDSVVPGEVVIVCWPNGEIMRLR 788
S ++KV LR +L+W++ + L S V + + V P+G+++ L
Sbjct: 368 SFDDKVGWLRKILQWQDDVAESGELLDELR---------SQVFEDRIYVFTPSGDVIDLP 418
Query: 789 SGSTAADAAMKVGLE-GKLVL---VNGQLVLPNTELKDGDIVEV 828
GST D A + G + V G++V L+ GD +E+
Sbjct: 419 MGSTPLDFAYYIHSNVGHTCIGAKVFGKIVPFTHRLQTGDQIEI 462
>TIGR_CMR|CPS_4973 [details] [associations]
symbol:CPS_4973 "guanosine-3,5-bis(diphosphate)
3-pyrophosphohydrolase" species:167879 "Colwellia psychrerythraea
34H" [GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=ISS] [GO:0015968 "stringent response"
evidence=ISS] InterPro:IPR003607 InterPro:IPR004811
InterPro:IPR007685 Pfam:PF04607 SMART:SM00471 SMART:SM00954
InterPro:IPR004095 InterPro:IPR012676 Pfam:PF02824 SUPFAM:SSF81271
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.10.20.30
InterPro:IPR012675 eggNOG:COG0317 KO:K01139 GO:GO:0008893
InterPro:IPR026020 PANTHER:PTHR21262 GO:GO:0015969
TIGRFAMs:TIGR00691 HOGENOM:HOG000018299 OMA:RAYFYAE
RefSeq:YP_271612.1 ProteinModelPortal:Q47UB1 STRING:Q47UB1
DNASU:3519239 GeneID:3519239 KEGG:cps:CPS_4973 PATRIC:21472739
ProtClustDB:CLSK742426 BioCyc:CPSY167879:GI48-4974-MONOMER
Uniprot:Q47UB1
Length = 703
Score = 289 (106.8 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 68/180 (37%), Positives = 100/180 (55%)
Query: 396 LEKELLISTSYIPGMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTL 455
+EKE+ + G++ + R K LYSI+ KM K++ ++V D A RV+V DK
Sbjct: 216 IEKEIAARLAE-SGIDAQIIGREKHLYSIYRKMLNKELMFNEVMDIYAFRVIVHDK---- 270
Query: 456 HGPAIQCCYSLLDIVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSALEVQIRTQ 515
I CY L +H L+ PI+ F DYI PK +GYQSLHT++ GP G +E+QIRT
Sbjct: 271 ----IDNCYRALGAMHNLFKPIETRFKDYIAIPKTNGYQSLHTSLIGPHGIPVEIQIRTH 326
Query: 516 KMHEYAEHGLAAHWLYKETGNKLQSISSMD-----ESDIEASSSLSKDTDDHNPLDTDLF 570
M + A+ G+AAHWLYK+ G+ + + M +S +E S + + +DLF
Sbjct: 327 DMDQMADKGVAAHWLYKQDGDNTGTTAQMKARRWMQSLLELQQSAGSSFEFIENVKSDLF 386
Score = 249 (92.7 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 78/221 (35%), Positives = 123/221 (55%)
Query: 150 DTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTL 209
+T++A +LHDV++D + + E FG VA+LV GVS+L + + N N+ +
Sbjct: 64 ETLMAALLHDVIEDTEVTKDELAELFGHTVAELVEGVSKLDKL--------KFN-NKEEM 114
Query: 210 GHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLAS 269
+A + R M+L MV D RV+LIKLADR HNMRT+ +L P K R +A+ETL I+ +A+
Sbjct: 115 ---QAENFRKMVLAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYAPIAN 171
Query: 270 RLGLWALKAELEDLCFAVL---QMRADLASMWSPR-NRVGYSRRITTIVSSPPLDERTAS 325
RLG+ +K ELE L F L + RA +++ S R NR I +++ L E +
Sbjct: 172 RLGIHDIKNELELLGFEALYPMRSRALKSAVQSARGNRKAIIDNIEKEIAAR-LAE--SG 228
Query: 326 DDESFTTFDEHVLSM-KDLLEAVVPFDILSDRRKRTKFLHD 365
D ++H+ S+ + +L + F+ + D +HD
Sbjct: 229 IDAQIIGREKHLYSIYRKMLNKELMFNEVMDIYAFRVIVHD 269
Score = 150 (57.9 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 40/124 (32%), Positives = 66/124 (53%)
Query: 104 VQKAIAFAKRAHHGQFRKTGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDD 163
++ A A+ AH GQ R +GDPY+TH + LA + +T++A +LHDV++D
Sbjct: 23 LKHAYVVARDAHDGQMRSSGDPYITHPVAVAINLAQMNLDH-----ETLMAALLHDVIED 77
Query: 164 ACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRI-NVNQGTLGHEEANDLRVMLL 222
+ + E FG VA+LV GVS+L + + + N + L + D+RV+L+
Sbjct: 78 TEVTKDELAELFGHTVAELVEGVSKLDKLKFNNKEEMQAENFRKMVLAMVQ--DIRVILI 135
Query: 223 GMVD 226
+ D
Sbjct: 136 KLAD 139
Score = 52 (23.4 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 18/59 (30%), Positives = 25/59 (42%)
Query: 742 RWEEQLRSEASLRQSKLGGKANGNPDSVVPGEVVIVCWPNGEIMRLRSGSTAADAAMKV 800
RW + L S N D + P E+ + P+G I+ L G+TA D A V
Sbjct: 359 RWMQSLLELQQSAGSSFEFIENVKSD-LFPEEIYVFT-PDGRIIELPMGATAIDFAYAV 415
>TAIR|locus:2090487 [details] [associations]
symbol:CRSH "Ca2+-activated RelA/spot homolog"
species:3702 "Arabidopsis thaliana" [GO:0005509 "calcium ion
binding" evidence=IEA;ISS] [GO:0015969 "guanosine tetraphosphate
metabolic process" evidence=IEA] [GO:0008728 "GTP diphosphokinase
activity" evidence=IGI] [GO:0009507 "chloroplast" evidence=IDA]
InterPro:IPR002048 InterPro:IPR007685 InterPro:IPR011992
Pfam:PF04607 Pfam:PF13499 PROSITE:PS50222 SMART:SM00054
SMART:SM00954 Prosite:PS00018 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 HSSP:P09860 eggNOG:COG0317 InterPro:IPR026020
PANTHER:PTHR21262 GO:GO:0008728 GO:GO:0015969 EMBL:BT006180
EMBL:AK228656 IPI:IPI00528710 RefSeq:NP_188374.2 UniGene:At.38719
ProteinModelPortal:Q84R11 SMR:Q84R11 PaxDb:Q84R11 PRIDE:Q84R11
EnsemblPlants:AT3G17470.1 GeneID:821012 KEGG:ath:AT3G17470
TAIR:At3g17470 HOGENOM:HOG000241233 InParanoid:Q84R11 OMA:RYKSRYS
PhylomeDB:Q84R11 ProtClustDB:CLSN2679918 ArrayExpress:Q84R11
Genevestigator:Q84R11 Uniprot:Q84R11
Length = 583
Score = 179 (68.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 46/128 (35%), Positives = 64/128 (50%)
Query: 411 EVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTLHGPAI--QCCYSLLD 468
+V + R KS YS+ K+ R +V D LRV++ N ++ + + CY +
Sbjct: 304 DVYIKGRYKSRYSMMKKLLRDGRKPEEVNDVLGLRVILMP-NSVVNDVEVGEKACYRTSE 362
Query: 469 IVHRLWIPIDGEFDDYIVNPKPSGYQSLHTAVQGPDGSAL----EVQIRTQKMHEYAEHG 524
I+ LW I DYI PK +GY+SLH AV D + E+QIRT M A G
Sbjct: 363 IIRSLWKEIPHRTKDYIARPKENGYRSLHMAVDVSDSDQIRPLMEIQIRTMDMDGSANAG 422
Query: 525 LAAHWLYK 532
A+H LYK
Sbjct: 423 TASHSLYK 430
Score = 108 (43.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 150 DTVVAGILHDVVDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTL 209
+ + A IL +VVD S+ + + G A L+ + R+ I +++V L
Sbjct: 131 EVISASILSEVVDANAISIYEVRDHIGTGTAHLLHEIFRVKNIPF------KVDV----L 180
Query: 210 GHEEANDLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLAS 269
E A LR L D R V++ L +L MR + LP + + ++ E L I+ LA
Sbjct: 181 DDETAASLRKFYLTYYDI-RAVIMDLVSKLDEMRHLDHLPRYRQQILSLEVLKIYSPLAH 239
Query: 270 RLGLWALKAELEDLCFAVL 288
+G L ELED+ F L
Sbjct: 240 AVGANHLSLELEDISFRYL 258
>UNIPROTKB|F1MR07 [details] [associations]
symbol:HDDC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008081
"phosphoric diester hydrolase activity" evidence=IEA]
InterPro:IPR003607 InterPro:IPR006674 SMART:SM00471 GO:GO:0046872
GO:GO:0008152 GO:GO:0008081 Gene3D:1.10.3210.10 CTD:374659
KO:K01139 InterPro:IPR026020 PANTHER:PTHR21262
GeneTree:ENSGT00390000011608 OMA:PEGWSEH EMBL:DAAA02052163
IPI:IPI00690680 RefSeq:NP_001179885.1 UniGene:Bt.62503
Ensembl:ENSBTAT00000024795 GeneID:613382 KEGG:bta:613382
NextBio:20898547 Uniprot:F1MR07
Length = 179
Score = 130 (50.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 35/102 (34%), Positives = 53/102 (51%)
Query: 103 QVQKAIAFAKRAHHGQFRKT--GDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDV 160
Q+ +A FA R H Q RK G PY+ H I RIL +G + + A +LHD
Sbjct: 7 QLLEAADFAARKHQRQRRKDPEGTPYINHPIGVARILTH---EAGITDIVVLQAALLHDT 63
Query: 161 VDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRI 202
V+D +L +E FGD+V +LV V+ + +L R+ ++
Sbjct: 64 VEDTDTTLDEVELHFGDQVRRLVEEVTDDKTLPKLERKRLQV 105
Score = 56 (24.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 228 PRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAELED 282
P L+KLAD+L+N+R + P + W + + GL +LE+
Sbjct: 113 PGAKLVKLADKLYNLRDLNRCTPEGWTEHRVQEYFEWAAQVVK-GLQGTNRQLEE 166
>UNIPROTKB|H0YNP9 [details] [associations]
symbol:HDDC3 "Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase MESH1" species:9606 "Homo sapiens"
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR003607
SMART:SM00471 GO:GO:0003824 GO:GO:0008152 EMBL:AC068831
InterPro:IPR026020 PANTHER:PTHR21262 HGNC:HGNC:30522
ProteinModelPortal:H0YNP9 SMR:H0YNP9 PRIDE:H0YNP9
Ensembl:ENST00000559898 Bgee:H0YNP9 Uniprot:H0YNP9
Length = 143
Score = 125 (49.1 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 103 QVQKAIAFAKRAHHGQFRKT--GDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDV 160
Q+ +A FA R H Q RK G PY+ H I RIL +G + + A +LHD
Sbjct: 7 QLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTH---EAGITDIVVLQAALLHDT 63
Query: 161 VDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQ 206
V+D +L +E FG +V +LV V+ + +L R+ R+ V Q
Sbjct: 64 VEDTDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERK--RLQVEQ 107
Score = 53 (23.7 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 228 PRVVLIKLADRLHNMRTIYALPP 250
P L+KLAD+L+N+R + P
Sbjct: 113 PGAKLVKLADKLYNLRDLNRCTP 135
>UNIPROTKB|Q8N4P3 [details] [associations]
symbol:HDDC3 "Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase MESH1" species:9606 "Homo sapiens"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IEA] InterPro:IPR003607 SMART:SM00471 GO:GO:0046872
GO:GO:0008152 EMBL:AC068831 CTD:374659 HOVERGEN:HBG081594 KO:K01139
OrthoDB:EOG49PB0R GO:GO:0008893 InterPro:IPR026020
PANTHER:PTHR21262 OMA:PEGWSEH EMBL:BC033794 IPI:IPI00394782
IPI:IPI00789618 RefSeq:NP_940929.1 UniGene:Hs.349979 PDB:3NR1
PDBsum:3NR1 ProteinModelPortal:Q8N4P3 SMR:Q8N4P3 IntAct:Q8N4P3
MINT:MINT-1475376 PhosphoSite:Q8N4P3 DMDM:122065202 PaxDb:Q8N4P3
PRIDE:Q8N4P3 DNASU:374659 Ensembl:ENST00000330334
Ensembl:ENST00000394272 GeneID:374659 KEGG:hsa:374659
UCSC:uc002bqe.4 GeneCards:GC15M091474 H-InvDB:HIX0012581
HGNC:HGNC:30522 HPA:HPA040895 neXtProt:NX_Q8N4P3
PharmGKB:PA142671696 eggNOG:NOG113345 InParanoid:Q8N4P3
EvolutionaryTrace:Q8N4P3 GenomeRNAi:374659 NextBio:100241
Bgee:Q8N4P3 CleanEx:HS_HDDC3 Genevestigator:Q8N4P3
GermOnline:ENSG00000184508 Uniprot:Q8N4P3
Length = 179
Score = 125 (49.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 103 QVQKAIAFAKRAHHGQFRKT--GDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDV 160
Q+ +A FA R H Q RK G PY+ H I RIL +G + + A +LHD
Sbjct: 7 QLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTH---EAGITDIVVLQAALLHDT 63
Query: 161 VDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQ 206
V+D +L +E FG +V +LV V+ + +L R+ R+ V Q
Sbjct: 64 VEDTDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERK--RLQVEQ 107
Score = 56 (24.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 228 PRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAELED 282
P L+KLAD+L+N+R + P + W + + GL +LE+
Sbjct: 113 PGAKLVKLADKLYNLRDLNRCTPEGWSEHRVQEYFEWAAQVVK-GLQGTNRQLEE 166
>UNIPROTKB|Q722A6 [details] [associations]
symbol:LMOf2365_0828 "HD domain protein" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003607 SMART:SM00471 GO:GO:0003824
GO:GO:0008152 EMBL:AE017262 GenomeReviews:AE017262_GR
eggNOG:COG0317 InterPro:IPR026020 PANTHER:PTHR21262
HOGENOM:HOG000265510 RefSeq:YP_013431.1 ProteinModelPortal:Q722A6
STRING:Q722A6 GeneID:2797284 KEGG:lmf:LMOf2365_0828 PATRIC:20322872
OMA:WYNEGIK ProtClustDB:CLSK564112 Uniprot:Q722A6
Length = 180
Score = 138 (53.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 43/112 (38%), Positives = 59/112 (52%)
Query: 105 QKAIAFAKRAHHGQFRK-TGDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDVVDD 163
+KA +AH GQ RK TG+PY +H ++ RIL +G R + VVAG+LHD V+D
Sbjct: 3 EKARQMMIKAHSGQVRKITGEPYFSHPLNVARILRR----AGFRE-EVVVAGLLHDAVED 57
Query: 164 ACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRIN-VNQGTLGHEEA 214
+ I FG EVA LVA + ++ R+ I V G L E+A
Sbjct: 58 TEMTDADIRAAFGAEVADLVASHTENKTLSWEERKAHTIEQVRTGNL-EEKA 108
>RGD|1311839 [details] [associations]
symbol:Hddc3 "HD domain containing 3" species:10116 "Rattus
norvegicus" [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003607 InterPro:IPR006674 SMART:SM00471 RGD:1311839
GO:GO:0046872 EMBL:CH473980 GO:GO:0008152 GO:GO:0008081
Gene3D:1.10.3210.10 CTD:374659 KO:K01139 OrthoDB:EOG49PB0R
InterPro:IPR026020 PANTHER:PTHR21262 GeneTree:ENSGT00390000011608
IPI:IPI00189404 RefSeq:NP_001100998.1 UniGene:Rn.17508
Ensembl:ENSRNOT00000016445 GeneID:308758 KEGG:rno:308758
UCSC:RGD:1311839 OMA:VAGCRGT NextBio:659470 Uniprot:D4A500
Length = 179
Score = 121 (47.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 33/102 (32%), Positives = 53/102 (51%)
Query: 103 QVQKAIAFAKRAHHGQFRKT--GDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDV 160
Q+ +A FA + H Q RK G PY+ H I RIL +G + + A +LHD
Sbjct: 7 QLLEAADFAAQKHRQQRRKDPEGTPYINHPIGVARILTH---EAGITDIVVLQAALLHDT 63
Query: 161 VDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRI 202
V+D +L +E FG +V +LV V+ + +L R+ +++
Sbjct: 64 VEDTDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRQQV 105
Score = 62 (26.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 228 PRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAELED 282
P L+KLAD+LHN+R + P + W + + GL +LE+
Sbjct: 113 PGAKLVKLADKLHNLRDLNRCTPKGWSEHRVQEYFEWAAQVVK-GLQGTNQQLEE 166
>UNIPROTKB|E2QTM0 [details] [associations]
symbol:HDDC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR003607 SMART:SM00471 GO:GO:0003824 GO:GO:0008152
CTD:374659 KO:K01139 InterPro:IPR026020 PANTHER:PTHR21262
GeneTree:ENSGT00390000011608 OMA:PEGWSEH EMBL:AAEX03002330
RefSeq:XP_545862.1 Ensembl:ENSCAFT00000019442 GeneID:488744
KEGG:cfa:488744 NextBio:20862046 Uniprot:E2QTM0
Length = 179
Score = 124 (48.7 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 103 QVQKAIAFAKRAHHGQFRKT--GDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDV 160
Q+ +A FA R H Q RK G PY+ H I RIL +G + + A +LHD
Sbjct: 7 QLVEAADFAARKHRLQRRKDPEGTPYINHPIGVARILTH---EAGITDIVVLQAALLHDT 63
Query: 161 VDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQ 206
V+D +L +E FG +V +LV V+ + +L R+ R+ V Q
Sbjct: 64 VEDTDTTLDEVELHFGTQVRRLVEEVTDDKTLPKLERK--RLQVEQ 107
Score = 54 (24.1 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 228 PRVVLIKLADRLHNMRTIYALPP 250
P L+KLAD+L+N+R + P
Sbjct: 113 PAAKLVKLADKLYNLRDLNRCTP 135
>UNIPROTKB|F1RMH8 [details] [associations]
symbol:HDDC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003824 "catalytic activity" evidence=IEA]
InterPro:IPR003607 SMART:SM00471 GO:GO:0003824 GO:GO:0008152
CTD:374659 KO:K01139 InterPro:IPR026020 PANTHER:PTHR21262
GeneTree:ENSGT00390000011608 OMA:PEGWSEH EMBL:CT868688
RefSeq:NP_001230338.1 UniGene:Ssc.47907 Ensembl:ENSSSCT00000002039
GeneID:100153189 KEGG:ssc:100153189 Uniprot:F1RMH8
Length = 179
Score = 122 (48.0 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 103 QVQKAIAFAKRAHHGQFRKT--GDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDV 160
Q+ +A FA R H Q RK G PY+ H I RIL +G + + A +LHD
Sbjct: 7 QLLEAADFAARKHQRQRRKDPEGTPYINHPIGVARILTR---EAGITDIVVLQAALLHDT 63
Query: 161 VDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRI 202
V+D +L +E FG +V +LV V+ + +L R+ ++
Sbjct: 64 VEDTDTTLDEVELHFGVQVRRLVEEVTDDKTLPKLERKQLQV 105
Score = 56 (24.8 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 228 PRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAELED 282
P L+KLAD+L+N+R + P + W + + GL +LE+
Sbjct: 113 PGAKLVKLADKLYNLRDLNRCTPEGWSERRVQEYFEWAAQVVK-GLQGTNQQLEE 166
>MGI|MGI:1915945 [details] [associations]
symbol:Hddc3 "HD domain containing 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008081 "phosphoric diester hydrolase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008893 "guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003607 SMART:SM00471 MGI:MGI:1915945 GO:GO:0046872
GO:GO:0008152 HSSP:Q54089 CTD:374659 HOVERGEN:HBG081594 KO:K01139
OrthoDB:EOG49PB0R GO:GO:0008893 InterPro:IPR026020
PANTHER:PTHR21262 GeneTree:ENSGT00390000011608 OMA:PEGWSEH
eggNOG:NOG113345 EMBL:AK004078 EMBL:BC038310 IPI:IPI00132959
RefSeq:NP_081088.1 UniGene:Mm.21171 ProteinModelPortal:Q9D114
SMR:Q9D114 STRING:Q9D114 PhosphoSite:Q9D114 PaxDb:Q9D114
PRIDE:Q9D114 Ensembl:ENSMUST00000032747 GeneID:68695 KEGG:mmu:68695
UCSC:uc009ian.1 InParanoid:Q9D114 NextBio:327714 Bgee:Q9D114
CleanEx:MM_HDDC3 Genevestigator:Q9D114
GermOnline:ENSMUSG00000030532 Uniprot:Q9D114
Length = 179
Score = 120 (47.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 33/102 (32%), Positives = 52/102 (50%)
Query: 103 QVQKAIAFAKRAHHGQFRKT--GDPYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDV 160
Q+ +A FA H Q RK G PY+ H I RIL +G + + A +LHD
Sbjct: 7 QLLEAADFAAHKHRQQRRKDPEGTPYINHPIGVARILTH---EAGITDIVVLQAALLHDT 63
Query: 161 VDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRI 202
V+D +L +E FG +V +LV V+ + +L R+ +++
Sbjct: 64 VEDTDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRQQV 105
Score = 57 (25.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 228 PRVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAELED 282
P L+KLAD+L+N+R + P + W + + GL +LE+
Sbjct: 113 PGAKLVKLADKLYNLRDLNRCTPTGWSEHRVQEYFEWAAQVVK-GLQGTNQQLEE 166
>ZFIN|ZDB-GENE-050417-377 [details] [associations]
symbol:hddc3 "HD domain containing 3" species:7955
"Danio rerio" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008893
"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR003607
SMART:SM00471 ZFIN:ZDB-GENE-050417-377 GO:GO:0046872 GO:GO:0008152
EMBL:BC092780 IPI:IPI00499964 RefSeq:NP_001017835.1
UniGene:Dr.85187 HSSP:Q54089 ProteinModelPortal:Q568P1
GeneID:550533 KEGG:dre:550533 CTD:374659 eggNOG:COG0317
HOVERGEN:HBG081594 InParanoid:Q568P1 KO:K01139 OrthoDB:EOG49PB0R
NextBio:20879774 GO:GO:0008893 InterPro:IPR026020 PANTHER:PTHR21262
Uniprot:Q568P1
Length = 180
Score = 112 (44.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 106 KAIAFAKRAHHGQFRKT--GDPYLTHCIHTGRILAMLIPSSGKRA-VDTVVAGILHDVVD 162
+ + FA H Q K G PY+ H I RIL+ G+ V+ + A +LHD V+
Sbjct: 11 ETVNFAAEKHRNQRHKDPEGTPYINHPIGVARILS----HEGEITDVEVIQAALLHDTVE 66
Query: 163 DACESLGSIEEEFGDEVAKLVAGVS 187
D + +E FG VA++V GV+
Sbjct: 67 DTDTTFEELESVFGATVARIVQGVT 91
Score = 61 (26.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 232 LIKLADRLHNMRTIYALPPAKARAVAQETLLIWCSLASRLGLWALKAELED 282
L+KLAD+L+N+R + P A + W S + GL A +E+
Sbjct: 118 LVKLADKLYNLRDLNRCTPEGWSAQRVQEYFEWASQVVK-GLRGTNAAIEE 167
>WB|WBGene00014148 [details] [associations]
symbol:ZK909.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008081
"phosphoric diester hydrolase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0019915 "lipid storage"
evidence=IMP] InterPro:IPR003607 SMART:SM00471 GO:GO:0003824
GO:GO:0008152 GO:GO:0019915 EMBL:Z82096 eggNOG:COG0317 KO:K01139
InterPro:IPR026020 PANTHER:PTHR21262 GeneTree:ENSGT00390000011608
PIR:T28096 RefSeq:NP_493608.2 ProteinModelPortal:O18307 SMR:O18307
PaxDb:O18307 EnsemblMetazoa:ZK909.3.1 EnsemblMetazoa:ZK909.3.2
EnsemblMetazoa:ZK909.3.3 GeneID:191461 KEGG:cel:CELE_ZK909.3
UCSC:ZK909.3.1 CTD:191461 WormBase:ZK909.3 HOGENOM:HOG000265510
InParanoid:O18307 OMA:DDVINRH NextBio:949244 Uniprot:O18307
Length = 229
Score = 117 (46.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 38/112 (33%), Positives = 57/112 (50%)
Query: 104 VQKAIAFAKRAHHGQFRK-TGDPYLTHCIHTGRILAMLIPSSGKRAVD--TVVAGILHDV 160
V KA FA R H Q RK PY+ H I G M I ++ + D T+ A +LHDV
Sbjct: 61 VLKATDFAARRHRHQKRKDNATPYINHPI--G---VMYILTNEAKVYDPVTLAAAVLHDV 115
Query: 161 VDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRINVNQGTLGHE 212
V+D + I++EFG+EV ++V + + + R+ +I N G H+
Sbjct: 116 VEDTKTTPEEIQQEFGNEVFQVVKECTDDKNLAKAERKKLQIE-NYGKHSHQ 166
Score = 43 (20.2 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 232 LIKLADRLHNMRTIYALPP 250
L+ LAD+L+N+R + P
Sbjct: 169 LVHLADKLYNLRDLERKAP 187
>UNIPROTKB|Q722B6 [details] [associations]
symbol:LMOf2365_0818 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR007685 Pfam:PF04607 SMART:SM00954
EMBL:AE017262 GenomeReviews:AE017262_GR InterPro:IPR026020
PANTHER:PTHR21262 GO:GO:0015969 eggNOG:COG2357 HOGENOM:HOG000263234
RefSeq:YP_013421.1 ProteinModelPortal:Q722B6 STRING:Q722B6
GeneID:2797304 KEGG:lmf:LMOf2365_0818 PATRIC:20322852 OMA:DYSPIEH
ProtClustDB:CLSK888112 Uniprot:Q722B6
Length = 212
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 51/154 (33%), Positives = 76/154 (49%)
Query: 396 LEKELLISTSYIPGMEVTLSSRLKSLYSIFSKMRRKDVGIHKVYDARALRVVVGDKNGTL 455
L +E Y P ME L SR+KSL SI +K+ +K V I AL+ V D +
Sbjct: 33 LNEEFQFIHDYNP-ME-HLKSRVKSLESIGAKLEKKKVDITP---ENALKYV-HD----I 82
Query: 456 HGPAIQCCYSLLDIVHRLWIPIDGEFD-------DYIVNPKPSGYQSLHTAVQGP----- 503
G I C S + + R+ + G+ D DY+ NPKP+GY+SLH + P
Sbjct: 83 AGIRITC--SFVSDIFRIHEMLAGQSDITIKRVKDYVTNPKPNGYRSLHLLCEVPVFLTN 140
Query: 504 --DGSALEVQIRTQKMHEYA--EHGLAAHWLYKE 533
+ +E+QIRT M +A EH + ++ Y++
Sbjct: 141 RSEKMTVEIQIRTVAMDFWASLEHKI--YYKYQQ 172
>DICTYBASE|DDB_G0287233 [details] [associations]
symbol:spoT "guanosine polyphosphate
pyrophosphohydrolase" species:44689 "Dictyostelium discoideum"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003607 SMART:SM00471
dictyBase:DDB_G0287233 GO:GO:0003824 GenomeReviews:CM000154_GR
GO:GO:0008152 EMBL:AAFI02000099 eggNOG:COG0317 KO:K01139
InterPro:IPR026020 PANTHER:PTHR21262 OMA:DDVINRH RefSeq:XP_637324.1
ProteinModelPortal:Q54KN3 EnsemblProtists:DDB0230182 GeneID:8626021
KEGG:ddi:DDB_G0287233 InParanoid:Q54KN3 ProtClustDB:CLSZ2430020
Uniprot:Q54KN3
Length = 208
Score = 104 (41.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 32/102 (31%), Positives = 52/102 (50%)
Query: 103 QVQKAIAFAKRAHHGQFRKTGD--PYLTHCIHTGRILAMLIPSSGKRAVDTVVAGILHDV 160
Q+ K+I F+ + H Q RK PY+ H I G +A + +G D + A ILHD
Sbjct: 8 QLMKSIDFSCKKHRDQRRKDSHSTPYINHPI--G--VAYNLIKAGVYDSDILQAAILHDT 63
Query: 161 VDDACESLGSIEEEFGDEVAKLVAGVSRLSYINQLLRRHRRI 202
++D + I +EFG+ VA V V+ +++ R+ +I
Sbjct: 64 IEDTQTTKEEIIKEFGERVASYVMDVTDDKSLSKQERKKHQI 105
Score = 54 (24.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 232 LIKLADRLHNMRTIYA-LPPAKARAVAQETLLIWC-SLASRL---GLWALKAELEDL 283
L+K+AD+L N+R I PP+ + V Q +W ++ + L W L+++L+++
Sbjct: 117 LVKMADKLFNLRDIQTNAPPSWSVDVIQG-YFVWAKAVINNLRGQNQW-LESQLDEI 171
>FB|FBgn0039650 [details] [associations]
symbol:Mesh1 "Metazoan SpoT homolog-1" species:7227
"Drosophila melanogaster" [GO:0008081 "phosphoric diester hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0042594 "response to starvation" evidence=IMP]
[GO:0015971 "guanosine tetraphosphate catabolic process"
evidence=IDA] [GO:0008893 "guanosine-3',5'-bis(diphosphate)
3'-diphosphatase activity" evidence=IDA] InterPro:IPR003607
InterPro:IPR006674 Pfam:PF01966 SMART:SM00471 EMBL:AE014297
GO:GO:0046872 GO:GO:0042594 GO:GO:0008081 eggNOG:COG0317 KO:K01139
GO:GO:0008893 InterPro:IPR026020 PANTHER:PTHR21262 EMBL:BT024375
RefSeq:NP_651682.1 UniGene:Dm.24112 PDB:3NQW PDBsum:3NQW
ProteinModelPortal:Q9VAM9 SMR:Q9VAM9 PaxDb:Q9VAM9 PRIDE:Q9VAM9
EnsemblMetazoa:FBtr0085407 GeneID:43456 KEGG:dme:Dmel_CG11900
UCSC:CG11900-RA CTD:43456 FlyBase:FBgn0039650
GeneTree:ENSGT00390000011608 InParanoid:Q9VAM9 OMA:PEGWSEH
OrthoDB:EOG4GMSDF PhylomeDB:Q9VAM9 GenomeRNAi:43456 NextBio:834034
Bgee:Q9VAM9 GO:GO:0015971 Uniprot:Q9VAM9
Length = 179
Score = 95 (38.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 28/86 (32%), Positives = 43/86 (50%)
Query: 106 KAIAFAKRAHHGQFRKTGD--PYLTHCIHTGRILAM--LIPSSGKRAVDTVVAGILHDVV 161
+ + +A H Q RK PY+ H I+ IL++ I G ++A +LHDVV
Sbjct: 11 ECLQYAAFKHRQQRRKDPQETPYVNHVINVSTILSVEACITDEG-----VLMAALLHDVV 65
Query: 162 DDACESLGSIEEEFGDEVAKLVAGVS 187
+D S +E+ FG +V LV V+
Sbjct: 66 EDTDASFEDVEKLFGPDVCGLVREVT 91
Score = 56 (24.8 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 229 RVVLIKLADRLHNMRTIYALPPAKARAVAQETLLIW 264
R LIKLAD+L N+R + P ++ +W
Sbjct: 115 RAKLIKLADKLDNLRDLQVNTPTGWTQERRDQYFVW 150
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 830 784 0.00095 121 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 38
No. of states in DFA: 628 (67 KB)
Total size of DFA: 399 KB (2194 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.01u 0.10s 65.11t Elapsed: 00:00:03
Total cpu time: 65.01u 0.10s 65.11t Elapsed: 00:00:03
Start: Mon May 20 18:34:21 2013 End: Mon May 20 18:34:24 2013