BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003329
(829 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZI17|OML2_ORYSJ Protein MEI2-like 2 OS=Oryza sativa subsp. japonica GN=ML2 PE=2
SV=1
Length = 848
Score = 889 bits (2298), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/822 (58%), Positives = 578/822 (70%), Gaps = 70/822 (8%)
Query: 42 DASLFSSSLPVLPHEKLNLNAMGLGRQSVDDISSGLSKVHHGVASDDPLEGVMNPAIGNS 101
+ASLFS+SLPVLPHEK+N G +DD S+ L ++ D I +
Sbjct: 47 NASLFSTSLPVLPHEKINFLDSARGTPLMDDASAKLKELDDDPEGKDYKFDFDLRQIDDL 106
Query: 102 LPDDEDELLAGIMDDFDLRGLPSSLEDLEDYDIFGSGGGMELEGEPQESLS--------- 152
LP+ ED+L AGI ++ + G +S+E+LE++D+FGSGGGMEL+ +P ES++
Sbjct: 107 LPN-EDDLFAGITNEIEPAGQTNSMEELEEFDVFGSGGGMELDTDPVESITAGLGNTSIA 165
Query: 153 --MR------------------EHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRT 192
+R EHPYGEHPSRTLFVRNINSNV+D+ELR+LFEQYGDIRT
Sbjct: 166 DGLRGNGVNHFGPSNSASTVAGEHPYGEHPSRTLFVRNINSNVDDTELRSLFEQYGDIRT 225
Query: 193 LYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLV 252
LYTA KHRGFVMISY+DIRAAR AMR LQNKPLRRRKLDIHFSIPK+NPSDKDLNQGTLV
Sbjct: 226 LYTATKHRGFVMISYFDIRAARGAMRGLQNKPLRRRKLDIHFSIPKENPSDKDLNQGTLV 285
Query: 253 VFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAG 312
+FNLDPSVSNE++RQIFG YGEVKEIRETP+K+HHKFIEFYDVRAAEAAL+SLN+S+IAG
Sbjct: 286 IFNLDPSVSNEEVRQIFGTYGEVKEIRETPNKKHHKFIEFYDVRAAEAALRSLNKSEIAG 345
Query: 313 KRIKLEPSRPGGARRNLMLQLNQELEQDESRILQ-HQVGSPITNSPPGNWVQFSSPIEHN 371
KRIKLEPSRPGG RRNLM QL +++QDE R + VGSPI +SPPG W Q+SSP ++N
Sbjct: 346 KRIKLEPSRPGGTRRNLMQQLGHDIDQDEPRSYRIPHVGSPIASSPPGAWAQYSSPTDNN 405
Query: 372 PLQTISKSPNFRNMSPTTSNHMPGLASILHPQVSTLEKIAPIGKDQGRGSLMEHALTNTI 431
LQ + SP MSP G+ L +S KIAPIGKD S + +N
Sbjct: 406 LLQAFNASPTGNGMSPI------GMPPSL---ISNAVKIAPIGKDS-NWSKYDKVFSNNN 455
Query: 432 SANGASFQQSNSFSEPKIGLYRGTVSSFGPSPSNGSGVETLSGPQFLWGSPSRYSEHSSS 491
+GA+FQ S+S+ + K S S TL+GP+FLWGSP YSEH+ S
Sbjct: 456 QPHGAAFQHSHSYQDHK-------------SEHMSSSPGTLTGPEFLWGSPKPYSEHAQS 502
Query: 492 PAWQTSSMGHPFSSNGKI--HGLPYSGRQGSFLGSS---QHHHVGSAPSGVPLERRFGFL 546
P W+ ++GH SN + GL Y GRQ S GS HHHVGSAPSG P E FGFL
Sbjct: 503 PIWRPPAIGHAIPSNTRSQGQGLLYGGRQASLFGSQDQLHHHHVGSAPSGAPFESHFGFL 562
Query: 547 PESPETSFMNPVAF---CGMGIGQNDGSFMVNMGSRASVNPGITVPRNLSD-NGSSFRVM 602
PESPETS+MN V F +G G+N M+NM +RASVNP + N+SD N SSFR +
Sbjct: 563 PESPETSYMNQVRFGNIGNIGSGRNGTGLMLNMAARASVNPVSALSGNMSDNNSSSFRPI 622
Query: 603 SSPRLSPVFLGNGPYPGLTPANIEGLYERGRSRRIENNNGNQLDSKKQFQLELEKIRSGE 662
SPRL F GN Y G ++ ERGR+RR++++ Q DSKKQ+QL+LEKIR G+
Sbjct: 623 LSPRLGQSFYGNPTYQGPGSFGLDNSIERGRNRRVDSSVF-QADSKKQYQLDLEKIRKGD 681
Query: 663 DTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPLHI 722
DTRTTLMIKNIPNKYTSKMLLAAIDE HKGTYDF YLPIDFKNKCNVGYAFINM+SP+HI
Sbjct: 682 DTRTTLMIKNIPNKYTSKMLLAAIDEFHKGTYDFFYLPIDFKNKCNVGYAFINMISPVHI 741
Query: 723 IPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNSSLMNEDKRCRPILFHSEGP 782
+ FY+AFNGKKWEKFNSEKVASLAYARIQGR AL++HFQNSSLMNEDKRCRPILFHS GP
Sbjct: 742 VSFYQAFNGKKWEKFNSEKVASLAYARIQGRTALISHFQNSSLMNEDKRCRPILFHSNGP 801
Query: 783 EAGDQVTQEQLNSNSVNFQVCPSNGSHLRDASGSPIADDEGN 824
+AG+ QE N + + +G+ A+G P ++E N
Sbjct: 802 DAGN---QEPFPINGICIHMPLEDGA---IATGDPFGNEEDN 837
>sp|Q8VWF5|AML5_ARATH Protein MEI2-like 5 OS=Arabidopsis thaliana GN=ML5 PE=1 SV=1
Length = 800
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/815 (60%), Positives = 592/815 (72%), Gaps = 74/815 (9%)
Query: 17 LNIPKEVGGGSCGRIAG-SDSYLASDDASLFSSSLPVLPHEKLNLNAMGLGRQSVDDISS 75
++IP E G+ G + G + S DA+LFSSSLPV P KL L+ G +DD +
Sbjct: 1 MDIPHEAEAGAWGILPGFGRHHHPSSDATLFSSSLPVFPRGKLQLSDNRDGFSLIDD--T 58
Query: 76 GLSKVHHGVASDDPLEGVMNPAIGNSLPDDEDELLAGIMDDFDLRGLPSSLEDLEDYDIF 135
+S+ + S D E + +IGN LPD+ED LL G+MDD DL LP D +DYD+F
Sbjct: 59 AVSRTNKFNESADDFE---SHSIGNLLPDEED-LLTGMMDDLDLGELP----DADDYDLF 110
Query: 136 GSGGGMELEGEPQESLSMR-----------------------------EHPYGEHPSRTL 166
GSGGGMEL+ + +++LSM EHPYGEHPSRTL
Sbjct: 111 GSGGGMELDADFRDNLSMSGPPRLSLSSLGGNAIPQFNIPNGAGTVAGEHPYGEHPSRTL 170
Query: 167 FVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLR 226
FVRNINSNVEDSEL ALFEQYGDIRTLYT CKHRGFVMISYYDIR+AR AMR+LQNKPLR
Sbjct: 171 FVRNINSNVEDSELTALFEQYGDIRTLYTTCKHRGFVMISYYDIRSARMAMRSLQNKPLR 230
Query: 227 RRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRH 286
RRKLDIHFSIPKDNPS+KD+NQGTLVVFNLDPS+SN+DL IFGA+GE+KEIRETPHKRH
Sbjct: 231 RRKLDIHFSIPKDNPSEKDMNQGTLVVFNLDPSISNDDLHGIFGAHGEIKEIRETPHKRH 290
Query: 287 HKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESRILQ 346
HKF+EFYDVR AEAALK+LNR +IAGKRIK+EPSRPGGARR+LMLQLNQ+LE D+ L
Sbjct: 291 HKFVEFYDVRGAEAALKALNRCEIAGKRIKVEPSRPGGARRSLMLQLNQDLENDDLHYLP 350
Query: 347 HQVGSPITNSPP--GNWVQFSSPIEHNPLQTI-SKSPNFRNMSPTTSNHMPGLASILHPQ 403
+GSP+ NSPP GNW +SP+E +PLQ++ S+SP F +SPT + H+ GLAS L+ Q
Sbjct: 351 -MIGSPMANSPPMQGNW-PLNSPVEGSPLQSVLSRSPVF-GLSPTRNGHLSGLASALNSQ 407
Query: 404 VSTLEKIAPIGKDQGRGSLMEHALTNTISANGASFQQSNS-FSEPKI-GLYRGTVSSFGP 461
+ K+APIG+ Q I +NG FQQS+ F EPK+ Y G +S GP
Sbjct: 408 GPS-SKLAPIGRGQ-------------IGSNG--FQQSSHLFQEPKMDNKYTGNLSPSGP 451
Query: 462 SPSNGSGVETLSGPQFLWGSPSRYSEHSSSPAWQTSSMGHPFSSNGKIHGLPYSGRQGSF 521
SNG G+ETLSG +FLWGSP+ SE SSS W TSS G+P S +P+ + +
Sbjct: 452 LISNGGGIETLSGSEFLWGSPNARSEPSSSSVWSTSSTGNPLFSTRVDRSVPFPHQHQNQ 511
Query: 522 LGSSQHHHVGSAPSGVPLERRFGFLPESPETS-FMNPVAFCGM-GIGQNDGSFMVNMGSR 579
S H HVGSAPSGVPLE+ FGF+PES + + FMN V GM G+G N GSF M +
Sbjct: 512 SRSHHHFHVGSAPSGVPLEKHFGFVPESSKDALFMNTVGLQGMSGMGLNGGSFSSKMANN 571
Query: 580 ASVNPGITVPRNLSDNG-SSFRVMSSPRLSPVFLGNGPYPGLTPANIEGLYERGRSRRIE 638
+N G ++++NG SS+R+MSSPR SP+FL +G PG + + LYE GR RR+E
Sbjct: 572 GIINSG-----SMAENGFSSYRMMSSPRFSPMFLSSGLNPGRFASGFDSLYENGRPRRVE 626
Query: 639 NNNGNQLDSKKQFQLELEKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLY 698
NN+ NQ++S+KQFQL+LEKI +GED+RTTLMIKNIPNKYTSKMLLAAIDE ++GTY+FLY
Sbjct: 627 NNS-NQVESRKQFQLDLEKILNGEDSRTTLMIKNIPNKYTSKMLLAAIDEKNQGTYNFLY 685
Query: 699 LPIDFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVA 758
LPIDFKNKCNVGYAFINML+P IIPFYEAFNGKKWEKFNSEKVASLAYARIQG++AL+A
Sbjct: 686 LPIDFKNKCNVGYAFINMLNPELIIPFYEAFNGKKWEKFNSEKVASLAYARIQGKSALIA 745
Query: 759 HFQNSSLMNEDKRCRPILFHS-EGPEAGDQVTQEQ 792
HFQNSSLMNED RCRPI+F + PE+ +QV E+
Sbjct: 746 HFQNSSLMNEDMRCRPIIFDTPNNPESVEQVVDEE 780
>sp|Q9SVV9|AML3_ARATH Protein MEI2-like 3 OS=Arabidopsis thaliana GN=ML3 PE=2 SV=2
Length = 759
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/811 (55%), Positives = 553/811 (68%), Gaps = 111/811 (13%)
Query: 17 LNIPKEVGGGSCGRIAGSDSYLASDDASLFSSSLPVLPHEKLNLNAMGLGRQSVDDISSG 76
+NIP G + SD + AS DASLFSSSLP++ H+ N+N QSVD+++SG
Sbjct: 1 MNIP-------SGTFSRSDHFHASSDASLFSSSLPLIQHQ--NINPRDSYHQSVDEMASG 51
Query: 77 LSKVHHGVAS--DDPLEGVMNPAIGNSLPDDEDELLAGIMDDFDLRGLPSSLEDLEDYDI 134
L G+ + DD G +P IGN LPDDE+EL +G+MDD +L LP++L+DLEDYD+
Sbjct: 52 LDHFSGGIGNMLDD---GDSHP-IGNMLPDDEEELFSGLMDDLNLSSLPATLDDLEDYDL 107
Query: 135 FGSGGGMELEGEPQESLS-----------------------------MREHPYGEHPSRT 165
FGSGGG+ELE +P +SL+ EHPYGEHPSRT
Sbjct: 108 FGSGGGLELETDPYDSLNKGFSRMGFADSNVDNVMPQNIFQNGVGSIAGEHPYGEHPSRT 167
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 225
LFVRNINSNVEDSEL+ALFEQYG IRTLYTACK RGFVM+SY DIRA+R AMRALQ K L
Sbjct: 168 LFVRNINSNVEDSELQALFEQYGHIRTLYTACKQRGFVMVSYNDIRASRAAMRALQGKLL 227
Query: 226 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 285
++RKLDIHFSIPKDNPS+KD+NQGTLVVFNL PSVSN DL IFG YGE+KEIRETP+KR
Sbjct: 228 KKRKLDIHFSIPKDNPSEKDVNQGTLVVFNLAPSVSNRDLENIFGVYGEIKEIRETPNKR 287
Query: 286 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESRIL 345
HHKF+EF+DVR+A+AALK+LNR++IAGKRIKLE SRPGGARRN+MLQ+N ELEQD+S
Sbjct: 288 HHKFVEFFDVRSADAALKALNRTEIAGKRIKLEHSRPGGARRNMMLQMNPELEQDDSYSY 347
Query: 346 QHQVGSPITNSPPGNWVQFSSPIEHNPLQTISKSPNFRNMSPTTSNHMPGLASILHPQVS 405
+ V SP+ +SP GNW +SPI+H PLQ+ SKSP F N+SPT +I +P+ S
Sbjct: 348 LNHVESPLASSPIGNWR--NSPIDH-PLQSFSKSPIFGNLSPTK--------NIRYPEFS 396
Query: 406 TLEKIAPIGKDQG--RGSLMEHALTNTISANGASFQQSNSFSEPKIGLYRGTVSSFGPSP 463
K A + DQ R S ++H +++ S N AS + S +F +P+ + S P
Sbjct: 397 M--KTASVNNDQEGRRFSHLDHLFSSS-SYNNASHKAS-TFQQPQSFGSVSSFGSLNSHP 452
Query: 464 SNGSGVETLSGPQFLWGSPSRYSEHSSSPAWQTSSMGHPFSSNGKIHGLPYSGRQGSFLG 523
S+ VETLSG +FLWGSP SS AW + PFSSN + H PYS + GS
Sbjct: 453 SH---VETLSGSEFLWGSP-------SSSAWPVN----PFSSNRENHRFPYSAQNGSL-- 496
Query: 524 SSQHHHVGSAPSGVPLERRFGFLPESPETSFMNPVAFCGMGIGQNDGSFMVNMGSRASVN 583
Q HH+GSAPS GF P SPETS M VAF G AS N
Sbjct: 497 -HQLHHIGSAPS--------GFFPRSPETSSMGSVAFRG-----------------ASGN 530
Query: 584 PGITVPRNLSDNGS-SFRVMSSPRLSPVFLGNGPY--PGLTPANIEGLYERGRSRRIENN 640
+ RNL + S +F+++S+PR S +F GNG Y P T +I+ E G +++ + +
Sbjct: 531 --MNAQRNLRETSSPNFKMLSAPRRSQLFTGNGSYLWPAATMVSIDDPLEDGSNQQFD-S 587
Query: 641 NGNQLDSKKQFQLELEKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLP 700
NGNQ D K QFQL+L KI GED RTTLMIKNIPNKYT MLLAAIDE + GTYDFLYLP
Sbjct: 588 NGNQADIKIQFQLDLSKIMRGEDPRTTLMIKNIPNKYTRNMLLAAIDEKNSGTYDFLYLP 647
Query: 701 IDFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHF 760
IDFKNKCNVGYAFINM+SP I YEAFNGKKW+KFNSEKVASLAYARIQG+AAL+AHF
Sbjct: 648 IDFKNKCNVGYAFINMVSPKFTIALYEAFNGKKWDKFNSEKVASLAYARIQGKAALIAHF 707
Query: 761 QNSSLMNEDKRCRPILFHSEGPEAGDQVTQE 791
QNSSLMNED+RC+PI+F +G E+ + +E
Sbjct: 708 QNSSLMNEDRRCQPIVF--DGSESKYPIIRE 736
>sp|Q6EQX3|OML5_ORYSJ Protein MEI2-like 5 OS=Oryza sativa subsp. japonica GN=ML5 PE=2
SV=1
Length = 811
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/831 (49%), Positives = 518/831 (62%), Gaps = 94/831 (11%)
Query: 1 MKQFFDH--SSGPPKIP-----QLNIPKEVGGGSCGRIAGSDSYLASDDASLFSSSLP-V 52
M+Q DH SS P IP Q+ GG S + GS DA LFSSSLP V
Sbjct: 1 MEQREDHTKSSEPAFIPSKRTHQMRNIWAWGGPSSTTVNGSS------DAVLFSSSLPSV 54
Query: 53 LPHEKLNLNAMGLGRQSVDDISSGLSKVHHGVASDDPLEGVMNPAIGNSLPDDEDELLAG 112
L KL Q DD+ + + DP++ V IGN LPDDE ELLAG
Sbjct: 55 LQFGKLPGKEREYNAQPKDDMFPMMKQPGTNARVADPMDDVAQHLIGNLLPDDE-ELLAG 113
Query: 113 IMDDFDLRGLPSSLEDLEDYDIFGSGGGMELEGEPQESLSMR------------------ 154
+++DFD L + +E+ E+YD+F + GGMEL+ +P ES++
Sbjct: 114 VIEDFDHVKLRTQVEESEEYDVFRNSGGMELDIDPLESITFGTAKASLVNGTGSSTNQYS 173
Query: 155 ----------EHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVM 204
EHPYGEHPSRTLFVRNINSNVEDSELR+LFE +GDIR++YTA KHRGFVM
Sbjct: 174 IQNGAGTVTGEHPYGEHPSRTLFVRNINSNVEDSELRSLFEPFGDIRSMYTATKHRGFVM 233
Query: 205 ISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNED 264
ISYYDIR AR A ALQ+KPLRRRKLDIH+SIPK+NPSDKD+NQGTLV+FNL+P+VSNE+
Sbjct: 234 ISYYDIRHARNAKTALQSKPLRRRKLDIHYSIPKENPSDKDMNQGTLVIFNLEPAVSNEE 293
Query: 265 LRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 324
L QIFGA+GEV+EIRETPHKRHH+FIEFYDVRAAE+AL+SLN+SDIAGKR+KLEPSRPGG
Sbjct: 294 LLQIFGAFGEVREIRETPHKRHHRFIEFYDVRAAESALRSLNKSDIAGKRVKLEPSRPGG 353
Query: 325 ARRNLMLQLNQELEQDESRILQHQVGSPITNSPPGNWVQFSSPIEHNPLQTISKSPNFRN 384
ARR+ + N E EQDE++ Q+GSP NSPP W Q SP + N L ++++
Sbjct: 354 ARRSFIQHFNHEFEQDETKHNSFQIGSPSANSPPSLWSQLGSPTDENKLNALNETAFNGG 413
Query: 385 MSPTTSNHMPGLASILHPQVSTLEKIAPIGKDQGRGSLMEHALTNTISANGASFQQSNSF 444
MSP SNH+ G +S P S P+GK S + + I + S+SF
Sbjct: 414 MSPLGSNHLSGFSSGYPPMKS------PVGK-----SSYWNNRADNIFHGSPTLHNSHSF 462
Query: 445 SEPKIGLYRGTVSSFGPSPSNGS--GVETLSGPQFLWGSPSRYSEHSSSPAWQTSSMGHP 502
E G+ + + S + G L+G FLWG+ + +H + Q+ ++ +
Sbjct: 463 PEHHGGIISASPLVSSAASSASTASGFTALTGTSFLWGNNNNLRDHGQPSSIQSQALSNS 522
Query: 503 FSSNGKIHGLP--YSGRQGSFLGSSQHH---HVGSAPSGVPLERRFGFLPESPETSFMNP 557
N + Y +GSF G+S+H +VGSAPS P E FG+ +SP+TS+M
Sbjct: 523 LFPNNQPQRQSNLYQNLRGSF-GASEHFSQFNVGSAPSVFPFESNFGYFSDSPDTSYMRQ 581
Query: 558 VAFCGMGIGQNDGSFMVNMGSRASVNPGITVPRNLSDNGSSFRVMSSPRLSPVFLGNGPY 617
F G G + GS M N G+ PR++ + NG
Sbjct: 582 GKFGGTGPTRVSGSLMTNFGAY-------------------------PRINVASMQNGS- 615
Query: 618 PGLTPANIEGLYERGRSRRIENNNGNQLDSKKQFQLELEKIRSGEDTRTTLMIKNIPNKY 677
EGL +RGR++ + N+G Q DS+ Q+QL+LEKI +G+DTRTTLMIKNIPNKY
Sbjct: 616 -----VGFEGLLDRGRNQTV-GNSGCQEDSRVQYQLDLEKIIAGKDTRTTLMIKNIPNKY 669
Query: 678 TSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKF 737
TS MLL IDE H+GTYDF YLPIDFKNKCNVGYAFINM SP +I+ F++AF G+KWEKF
Sbjct: 670 TSNMLLEVIDETHEGTYDFFYLPIDFKNKCNVGYAFINMASPGYIVSFFKAFAGRKWEKF 729
Query: 738 NSEKVASLAYARIQGRAALVAHFQNSSLMNEDKRCRPILFHSEGPEAGDQV 788
NSEKV SLAYARIQG+AALV HFQNSSLMNEDKRCRP+LF + E +Q+
Sbjct: 730 NSEKVVSLAYARIQGKAALVNHFQNSSLMNEDKRCRPMLFDPKHTENNNQI 780
>sp|Q9SJG8|AML2_ARATH Protein MEI2-like 2 OS=Arabidopsis thaliana GN=ML2 PE=2 SV=2
Length = 843
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/803 (46%), Positives = 493/803 (61%), Gaps = 64/803 (7%)
Query: 50 LPVLPHEKLNLNAMGLGRQSVDDISSGLSKVHHGVASDDPLEGVMNPAIGNSLPDDEDEL 109
LP L HEKLN+ S D+ S L+K+ G + D LE V A+ LP+DE+EL
Sbjct: 56 LPTLFHEKLNMTDSD-SWLSFDESSPNLNKLVIGNSEKDSLEDVEPDALEILLPEDENEL 114
Query: 110 LAGIMDDFDLRGLPSSLEDLEDYDIFGSGGGMELEGEPQESLSMR--------------- 154
L G++D+ + GLP L+DLE+ D+F +GGGMEL+ E Q++ ++
Sbjct: 115 LPGLIDELNFTGLPDELDDLEECDVFCTGGGMELDVESQDNHAVDASGMQISDRGAANAF 174
Query: 155 --------------EHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHR 200
EHP GEHPSRTLFVRNINS+VEDSEL ALFE +G+IR+LYTACK R
Sbjct: 175 VPRKRPNTAGRVSVEHPNGEHPSRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSR 234
Query: 201 GFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSV 260
GFVMISYYDIRAA AMRALQN LR+R LDIHFSIPK+NPS+KD+NQGTLV+FN+D +V
Sbjct: 235 GFVMISYYDIRAAHAAMRALQNTLLRKRTLDIHFSIPKENPSEKDMNQGTLVIFNVDTTV 294
Query: 261 SNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 320
SN++L Q+FGAYGE++EIRETP++R H+FIE+YDVR AE ALK+LNRS+I GK IKLE S
Sbjct: 295 SNDELLQLFGAYGEIREIRETPNRRFHRFIEYYDVRDAETALKALNRSEIGGKCIKLELS 354
Query: 321 RPGGARRNLMLQLNQELEQDESRILQHQVGSPITNSPPGNWVQFSSPIEHNPLQTISKSP 380
RPGGARR + +Q+LE+ E +QVGS + NSPPGNW SP++ +P ++
Sbjct: 355 RPGGARRLSVPSQSQDLERTEVTNFYNQVGSHVANSPPGNW-PIGSPVKGSPSHAFTRPH 413
Query: 381 NFRNMSPTTSNHMPGLASILHPQVSTLEKIAPIGKDQGRGSLMEHALTNTISANGASFQQ 440
+ P S++MPGLASIL S+ +P+ DQG + + N + S+ Q
Sbjct: 414 GLGMVRPVNSDNMPGLASILPAHPSSFHGFSPVSNDQGLLNHSNQTILNKGLMHNISYGQ 473
Query: 441 SNSFSEPKIGLYRGTVSSFGPSPSNGSGVETLSGPQFLWGSPSRYSEHSSSPAWQ----- 495
+S E G ++ P + SG T S ++ WGSP +H + P +
Sbjct: 474 PHSLPEHITGGISNSMRFIAP---HSSGFGTSSDHRYRWGSP---PQHMNYPGYTGVSSS 527
Query: 496 TSSMGHPFSSNGKIHGLPYSGRQGSFLGSSQHHHVGSAPSGVPLERRFGFLPESPETSFM 555
+SS PF+ HG P++ RQ S LG Q HHVGSAPS + + SPE
Sbjct: 528 SSSTERPFTVR---HGFPFAERQASLLGKYQ-HHVGSAPSSIHFNTQMNCYTGSPEI--- 580
Query: 556 NPVAFCGMGIGQNDGSFMVNMGSRASVNPGITVPRNLSDNGSSFRVMSSPRLSPVFLGNG 615
P+ F MGI +N S + N G+++P N S+ + MSS P G
Sbjct: 581 -PLGFSDMGINRNYNS------AHGKANLGVSLPGNSSEQDFTGFGMSSMPTVPF----G 629
Query: 616 PYPGLTPANIEGLYERGRSRRIENNNGNQLDSKKQFQLELEKIRSGEDTRTTLMIKNIPN 675
GL E E+GR E++N NQ ++ ++L++I SG++ RTTL+IKNIPN
Sbjct: 630 GSRGLQSVRPEPFAEQGRIHNHESHNQNQFIDGGRYHIDLDRIASGDEIRTTLIIKNIPN 689
Query: 676 KYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWE 735
KYT KML+A IDE HKG YDFL LP DFKNKCN+G+AFINM+SPLHI+PF + FNGK WE
Sbjct: 690 KYTYKMLVAEIDEKHKGDYDFLCLPTDFKNKCNMGHAFINMVSPLHIVPFQQTFNGKIWE 749
Query: 736 KFNSEKVASLAYARIQGRAALVAHFQNSSLMNEDKRCRP-ILFHSEGPEAGDQVTQEQLN 794
KFNS KVASLAYA IQG++AL ++ Q S M E K+ P + +H +G +A D EQL
Sbjct: 750 KFNSGKVASLAYAEIQGKSALASYMQTPSSMKEQKQLFPEVSYHDDGQDAND---HEQLF 806
Query: 795 SNSVNFQVCPSNGSHLRDASGSP 817
S+ N S+ S+ D +P
Sbjct: 807 SSIWNITAPDSDWSYTMDLIENP 829
>sp|Q75M35|OML3_ORYSJ Protein MEI2-like 3 OS=Oryza sativa subsp. japonica GN=ML3 PE=2
SV=2
Length = 955
Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust.
Identities = 331/786 (42%), Positives = 432/786 (54%), Gaps = 102/786 (12%)
Query: 64 GLGRQSVDDISSGLSKVHHGVA-SDDPLE---GVMNPAIGNSLPDDEDELLAGIMDDFDL 119
G R+ V + + H + SD+PLE + IG+ LPDD+D+L++GI D F+
Sbjct: 156 GKSREIVSGVLCQSTGTHTSIYDSDEPLESMEAIEAQTIGDLLPDDDDDLISGIADGFEF 215
Query: 120 RGLPSSLEDLEDYDIFGSGGGMELE------GEPQESLSMRE-----HPYGEHPSRTLFV 168
G+ S+ +D D DIF +GGGMELE G+ + S + H + PSRTL V
Sbjct: 216 TGM-STNQDDADEDIFCTGGGMELENNDSVKGDKVQDGSFKSQISSGHSINKQPSRTLVV 274
Query: 169 RNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRR 228
RNI +N+EDS+L LF+QYGDIR LYT+ KH GFV +SYYDIRAA+ AMRAL +KPL
Sbjct: 275 RNITANIEDSDLTVLFQQYGDIRMLYTSFKHHGFVTVSYYDIRAAQNAMRALHSKPLGLM 334
Query: 229 KLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHK 288
KLD+ FS PK+N KD+++G LVV N+D S+SN+DL Q+ YG+VKEI +P K
Sbjct: 335 KLDVQFSFPKENVPGKDIDKGMLVVSNIDSSISNDDLLQMLSVYGDVKEISSSPISCTKK 394
Query: 289 FIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESRILQHQ 348
F+EFYDVRAAE AL LN+ I+G + K+E S+ G A L Q ++E +QD L HQ
Sbjct: 395 FVEFYDVRAAEEALHDLNKGGISGPKFKVELSQHGEAGSCLRQQHSREWKQDS---LPHQ 451
Query: 349 VGSPITNSPPGNWVQFSSPIEHN-PLQTISKSPNFRNMSPTTSNHMPGLASILHP----- 402
NS PG + + + N + + N + SPT G + P
Sbjct: 452 P----KNSSPGTIGKLGTKCQDNSTVHNLFSPVNQQLESPTQCISTTGPQILSSPIRIKS 507
Query: 403 ------QVSTLEKIAPIGKDQ-GRG-------SLMEHALTNTISANGASFQQSNSFSEPK 448
Q S + P+G+ GRG SL EH N I N S S + +
Sbjct: 508 TLQHNNQASVGDLSGPLGQGNFGRGIQTLHPRSLPEHH--NRICNNSKSMTVSGRNASSR 565
Query: 449 IGLYRGTVSSFGPSPSNGSGVET--------------LSGPQFLWGSPSRYSEHSSSPA- 493
+ GP+ G + L G + W + + + S+P
Sbjct: 566 QDGVDHNIQKVGPAGFCGHSFDQNNEAFGFTEIGSCPLHGYHYTWNHTNVFPQSPSAPIL 625
Query: 494 WQTSSMGHPFSSNGKIHGLPYSGRQGSFLGSSQHHHVGSAPSGVPLERRFGFLPESPETS 553
W S++ HP + P+ GS+ HH+GSAP S
Sbjct: 626 W--SNLQHPMHVHSYPGVPPHMLNTGSY--PMDQHHLGSAPDN--------------GGS 667
Query: 554 FMNPVAFCGMGIGQNDGSFMVNMGSRASVNPGITVPRNLSDNGSSFRVMSSPRLSPVFLG 613
F N +F +G ++G S P + P LS SS SPV G
Sbjct: 668 FGNVHSFHPGSLG--------SIGLHGS--PQL-YPSELSAFASSRGNFREALFSPVGGG 716
Query: 614 -----------NGPYPGL-TPANIEGLYERGRSRRIENNNGNQLDSKKQFQLELEKIRSG 661
NG P + + + +R RSRR + N Q ++K+QF+L++++I G
Sbjct: 717 FQSLQQMCNAINGRNPMIHVSTSYDATNDRMRSRR-HDGNPAQSENKRQFELDIDRIAKG 775
Query: 662 EDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPLH 721
ED+RTTLMIKNIPNKY K+LLA IDENH+GTYDF+YLPIDFKNKCNVGYAFINM P H
Sbjct: 776 EDSRTTLMIKNIPNKYNCKLLLAVIDENHRGTYDFIYLPIDFKNKCNVGYAFINMTDPQH 835
Query: 722 IIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNSSLMNEDKRCRPILFHSEG 781
IIPFY+ FNGKKWEKFNSEKVASLAYARIQGR+AL+AHFQNSSLMNEDK CRP+LFH +G
Sbjct: 836 IIPFYKTFNGKKWEKFNSEKVASLAYARIQGRSALIAHFQNSSLMNEDKWCRPMLFHKDG 895
Query: 782 PEAGDQ 787
P AGDQ
Sbjct: 896 PNAGDQ 901
>sp|Q64M78|OML4_ORYSJ Protein MEI2-like 4 OS=Oryza sativa subsp. japonica GN=ML4 PE=2
SV=1
Length = 1001
Score = 296 bits (757), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 171/323 (52%), Positives = 210/323 (65%), Gaps = 19/323 (5%)
Query: 476 QFLWGSPSRYSEHSSSPAWQTSSMGH----PFSSNGKIHGLPY--SGRQGSFLGSSQHHH 529
Q +W + S + H +SP S P S ++HG+P S + H H
Sbjct: 637 QLMWNNSSNFHHHPNSPVLWPSPGSFVNNVPSRSPAQMHGVPRAPSSHMIDNVLPMHHLH 696
Query: 530 VGSAPSGVP--LERRFGFLPESPETSFMNPVAFCGMGIGQNDGSFMVNMGSRASVNPGIT 587
VGSAP+ P +RR G+ E E +P + MG GS ++ ++ P
Sbjct: 697 VGSAPAINPSLWDRRHGYAGELTEAPNFHPGSVGSMGF---PGSPQLHSMELNNIYP--Q 751
Query: 588 VPRNLSDNGSSFRVMSSP---RLSPVFLGNGPYPGLTPANIEGLYERGRSRRIENNNGNQ 644
N D S + P + +F G P L + G ER RSRR ++NGNQ
Sbjct: 752 TGGNCMDPTVSPAQIGGPSPQQRGSMFHGRNPMVPLPSFDSPG--ERMRSRR-NDSNGNQ 808
Query: 645 LDSKKQFQLELEKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFK 704
D+KKQ++L++++I G+D+RTTLMIKNIPNKYTSKMLLAAIDENHKGTYDF+YLPIDFK
Sbjct: 809 SDNKKQYELDVDRIVRGDDSRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFIYLPIDFK 868
Query: 705 NKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNSS 764
NKCNVGYAFINM +P HIIPFY+ FNGKKWEKFNSEKVASLAYARIQG++AL+AHFQNSS
Sbjct: 869 NKCNVGYAFINMTNPQHIIPFYQTFNGKKWEKFNSEKVASLAYARIQGKSALIAHFQNSS 928
Query: 765 LMNEDKRCRPILFHSEGPEAGDQ 787
LMNEDKRCRPILFHS+GP AGDQ
Sbjct: 929 LMNEDKRCRPILFHSDGPNAGDQ 951
Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 191/355 (53%), Positives = 242/355 (68%), Gaps = 40/355 (11%)
Query: 27 SCGRIAGSDSYLASDDASLFSSSLPVLPHEKLNLNAM-GLGRQSVDDISSGLSKVHHGVA 85
S GRI + +Y ++ LFSSS+ + +KL L + GL QS++ KV
Sbjct: 129 SDGRINPNGAY---NENGLFSSSVSDIFDKKLRLTSKNGLVGQSIE-------KVDLNHV 178
Query: 86 SDDPLE---GVMNPAIGNSLPDDEDELLAGIMDDFDLRGLPSSLEDLEDYD--IFGSGGG 140
D+P E + IGN L D+D+LL+G++D+ G P++ + +D D IF +GGG
Sbjct: 179 DDEPFELTEEIEAQIIGNLL-PDDDDLLSGVVDEV---GYPTNANNRDDADDDIFYTGGG 234
Query: 141 MELEGEPQESLSM-----------------REHPYGEHPSRTLFVRNINSNVEDSELRAL 183
MELE + + L EH Y E PSRTLFVRNINSNVEDSEL+ L
Sbjct: 235 MELETDENKKLQEFNGSANDGIGLLNGVLNGEHLYREQPSRTLFVRNINSNVEDSELKLL 294
Query: 184 FEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSD 243
FE +GDIR LYTACKHRGFVMISYYDIR+A A LQNK LRRRKLDIH+SIPKDNPS+
Sbjct: 295 FEHFGDIRALYTACKHRGFVMISYYDIRSALNAKMELQNKALRRRKLDIHYSIPKDNPSE 354
Query: 244 KDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALK 303
KD+NQGT+V+FN+D S++N+DL +IFG YGE+KEIR+TP K HHK IEFYDVRAAEAAL+
Sbjct: 355 KDINQGTIVLFNVDLSLTNDDLHKIFGDYGEIKEIRDTPQKGHHKIIEFYDVRAAEAALR 414
Query: 304 SLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQELEQDESRILQHQVGSPITNSPP 358
+LNR+DIAGK+IKLE SR G ARR L ++ EL Q+E + ++GSP T+SPP
Sbjct: 415 ALNRNDIAGKKIKLETSRLGAARR-LSQHMSSELCQEEFGVC--KLGSPSTSSPP 466
>sp|Q9LYN7|AML4_ARATH Protein MEI2-like 4 OS=Arabidopsis thaliana GN=ML4 PE=1 SV=1
Length = 907
Score = 273 bits (697), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 152/267 (56%), Positives = 189/267 (70%), Gaps = 12/267 (4%)
Query: 527 HHHVGSAPS-GVPL-ERRFGFLPESPETSFMNPVAFCGMGIGQNDGSFMVNMGSRASVNP 584
HHH+GSAP P +RR ++ ESPE+S + + MG + S ++ GS +
Sbjct: 603 HHHIGSAPVLNSPFWDRRQAYVAESPESSGFHLGSPGSMGFPGSSPSHPMDFGSHKVFS- 661
Query: 585 GITVPRNLSDNGSSFRVMSSPRLSP-VFLGNGPYPGLTPANIEGLYERGRS---RRIENN 640
V N + S V+ S R P +F G P ++ + + ER R+ RR E+N
Sbjct: 662 --HVGGNRMEANSKNAVLRSSRQMPHLFTGRSPMLSVS-GSFDLPNERYRNLSHRRSESN 718
Query: 641 NGNQLDSKKQFQLELEKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLP 700
+ N KK ++L++++I GED+RTTLMIKNIPNKYTSKMLLAAIDE KGTYDFLYLP
Sbjct: 719 SSNA--EKKLYELDVDRILRGEDSRTTLMIKNIPNKYTSKMLLAAIDEYCKGTYDFLYLP 776
Query: 701 IDFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHF 760
IDFKNKCNVGYAFIN++ P +I+PFY+AFNGKKWEKFNSEKVASLAY RIQG++AL+AHF
Sbjct: 777 IDFKNKCNVGYAFINLIEPENIVPFYKAFNGKKWEKFNSEKVASLAYGRIQGKSALIAHF 836
Query: 761 QNSSLMNEDKRCRPILFHSEGPEAGDQ 787
QNSSLMNEDKRCRPILFH+ GP AGDQ
Sbjct: 837 QNSSLMNEDKRCRPILFHTAGPNAGDQ 863
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 166/241 (68%), Gaps = 14/241 (5%)
Query: 97 AIGNSLPDDEDELLAGIMDDFDLRGLPSSLEDLEDYDIFGSGGGMELEGEPQESLSMR-- 154
IGN LPD ED+L A ++ + + + +DL+D D+F S GGMEL+G+ S+S R
Sbjct: 133 TIGNLLPD-EDDLFAEVVGEGVHKSRANGGDDLDDCDLFSSVGGMELDGDVFSSVSQRDG 191
Query: 155 ----------EHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVM 204
EHP GE SR LFVRN++S++ED EL LF+Q+GD+R L+TA K+RGF+M
Sbjct: 192 KRGSNVSTVAEHPQGEILSRILFVRNVDSSIEDCELGVLFKQFGDVRALHTAGKNRGFIM 251
Query: 205 ISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNED 264
+SYYDIRAA+ A RAL + LR RKLDI +SIPK+NP + ++G L V NLD S+SNE+
Sbjct: 252 VSYYDIRAAQKAARALHGRLLRGRKLDIRYSIPKENPKENS-SEGALWVNNLDSSISNEE 310
Query: 265 LRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 324
L IF +YGE++E+R T H+ +IEF+DVR A+ AL+ LN ++AG+++KL P+ P G
Sbjct: 311 LHGIFSSYGEIREVRRTMHENSQVYIEFFDVRKAKVALQGLNGLEVAGRQLKLAPTCPEG 370
Query: 325 A 325
Sbjct: 371 T 371
>sp|Q8W4I9|AML1_ARATH Protein MEI2-like 1 OS=Arabidopsis thaliana GN=ML1 PE=1 SV=1
Length = 915
Score = 229 bits (584), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 169/241 (70%), Gaps = 12/241 (4%)
Query: 97 AIGNSLPDDEDELLAGIMDDFDLRGLPSSLEDLEDYDIFGSGGGMELEGEPQESLSMR-- 154
IGN LPD ED+L A + + + ++ ++L+++D+F S GGMEL+G+ S+S R
Sbjct: 140 TIGNLLPD-EDDLFAEVTGEVGRKSRANTGDELDEFDLFSSVGGMELDGDIFSSVSHRNG 198
Query: 155 ---------EHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMI 205
E GE PSRTL V NI+SNVED EL+ LFEQ+GDI+ L+TACK+RGF+M+
Sbjct: 199 ERGGNNSVGELNRGEIPSRTLLVGNISSNVEDYELKVLFEQFGDIQALHTACKNRGFIMV 258
Query: 206 SYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDL 265
SY DIRAA+ A RALQNK LR KLDI +SI K+NPS KD ++G L+V NLD S+SN++L
Sbjct: 259 SYCDIRAAQNAARALQNKLLRGTKLDIRYSISKENPSQKDTSKGALLVNNLDSSISNQEL 318
Query: 266 RQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGA 325
++ +YGEVKEIR T H +IEF+DVRAA AAL LN ++AGK+++L P+ P G
Sbjct: 319 NRLVKSYGEVKEIRRTMHDNSQIYIEFFDVRAAAAALGGLNGLEVAGKKLQLVPTYPEGT 378
Query: 326 R 326
R
Sbjct: 379 R 379
>sp|P08965|MEI2_SCHPO Meiosis protein mei2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mei2 PE=1 SV=1
Length = 750
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 94/133 (70%)
Query: 653 LELEKIRSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYA 712
++ +I SG DTRTT+MIKNIPNK+T +ML ID +KGTYDFLYL IDF NKCNVGYA
Sbjct: 584 VDYAQIASGIDTRTTVMIKNIPNKFTQQMLRDYIDVTNKGTYDFLYLRIDFVNKCNVGYA 643
Query: 713 FINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNSSLMNEDKRC 772
FIN + P II F +A G +W F+SEK+ ++YA IQG+ L+ F+NS +M+E+
Sbjct: 644 FINFIEPQSIITFGKARVGTQWNVFHSEKICDISYANIQGKDRLIEKFRNSCVMDENPAY 703
Query: 773 RPILFHSEGPEAG 785
RP +F S GP G
Sbjct: 704 RPKIFVSHGPNRG 716
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 17/161 (10%)
Query: 161 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYT-ACKHRGFVMISYYDIRAARTAMRA 219
H SR LFV N+ V + L LF + GD++ + T + G +++++DIR A A ++
Sbjct: 192 HASRYLFVTNLPRIVPYATLLELFSKLGDVKGIDTSSLSTDGICIVAFFDIRQAIQAAKS 251
Query: 220 LQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPS-------------VSNEDLR 266
L+++ +L ++F + + K +NQG + F LD + +S L+
Sbjct: 252 LRSQRFFNDRL-LYFQFCQRSSIQKMINQGATIQF-LDDNEGQLLLNMQGGSVLSILQLQ 309
Query: 267 QIFGAYGEVKEIRETPHKRHHKFI-EFYDVRAAEAALKSLN 306
I +G + ++ + + I EFYD R A AL L+
Sbjct: 310 SILQTFGPLLIMKPLRSQNVSQIICEFYDTRDASFALDELD 350
>sp|A2WY46|EAR1_ORYSI Protein terminal ear1 homolog OS=Oryza sativa subsp. indica GN=PLA2
PE=2 SV=1
Length = 680
Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 83/136 (61%), Gaps = 19/136 (13%)
Query: 660 SGEDTRTTLMIKNIPNKYTSKMLLAAIDENHK------------------GTYDFLYLPI 701
S +DTRTT+MI+NIPNKY+ K+LL +D NH +YDFLYLPI
Sbjct: 449 SCKDTRTTVMIRNIPNKYSQKLLLNMLD-NHCILSNQQIEASCEDEAQPFSSYDFLYLPI 507
Query: 702 DFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQ 761
DF NKCNVGY F+N+ SP + Y+AF+ + WE FNS K+ + YAR+QG AL HF+
Sbjct: 508 DFNNKCNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFK 567
Query: 762 NSSLMNEDKRCRPILF 777
NS + P++F
Sbjct: 568 NSKFPCDSDEYLPVVF 583
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 44/208 (21%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGDIRTL-YTACKHRGFVMISYYDIRAARTAMRALQ 221
SR + + + + + E+ +G +R + +A G + ++D+R+A A+ ++
Sbjct: 97 SRAVVLSLVPPHAPEDEIARAMAPFGAVRAVDASAVASEGVATVYFFDLRSAEHAVTGVR 156
Query: 222 NKPLRRR---------------------------------------KLDIHFSIPKDNPS 242
+ +R++ + HF+ P
Sbjct: 157 EQHIRQQCRLGQLYAAAAAAAASSPTWPPPAWDWPHDDNRGLVLGQAVWAHFAAASTVPD 216
Query: 243 DKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAAL 302
D ++G+LVV N P++S +LR+IF AYG+VK++RE+ + +KF+EF+D R A+ AL
Sbjct: 217 D-GASRGSLVVLNSLPAMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRAL 275
Query: 303 KSLNRSDIAGKRIKLE---PSRPGGARR 327
LN ++ G+R+ +E PS PG RR
Sbjct: 276 HELNGKELFGRRLVVEYTRPSLPGPRRR 303
>sp|Q0JGS5|EAR1_ORYSJ Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica
GN=PLA2 PE=2 SV=1
Length = 683
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 83/136 (61%), Gaps = 19/136 (13%)
Query: 660 SGEDTRTTLMIKNIPNKYTSKMLLAAIDENHK------------------GTYDFLYLPI 701
S +DTRTT+MI+NIPNKY+ K+LL +D NH +YDFLYLPI
Sbjct: 452 SCKDTRTTVMIRNIPNKYSQKLLLNMLD-NHCILSNQQIEASCEDEAQPFSSYDFLYLPI 510
Query: 702 DFKNKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQ 761
DF NKCNVGY F+N+ SP + Y+AF+ + WE FNS K+ + YAR+QG AL HF+
Sbjct: 511 DFNNKCNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFK 570
Query: 762 NSSLMNEDKRCRPILF 777
NS + P++F
Sbjct: 571 NSKFPCDSDEYLPVVF 586
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 44/208 (21%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGDIRTL-YTACKHRGFVMISYYDIRAARTAMRALQ 221
SR + + + + + E+ +G +R + +A G + ++D+R+A A+ ++
Sbjct: 97 SRAVVLSLVPPHAPEDEIARAMAPFGAVRAVDASAVASEGVATVYFFDLRSAEHAVTGVR 156
Query: 222 NKPLRRR---------------------------------------KLDIHFSIPKDNPS 242
+ +R++ + HF+ P
Sbjct: 157 EQHIRQQCRLGQLYAAAAAAAASSPTWPPPAWDWPHDDNRGLVLGQAVWAHFAAASTVPD 216
Query: 243 DKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAAL 302
D ++G+LVV N P++S +LR+IF AYG+VK++RE+ + +KF+EF+D R A+ AL
Sbjct: 217 D-GASRGSLVVLNSLPAMSVFELREIFQAYGDVKDVRESALRPSNKFVEFFDTRDADRAL 275
Query: 303 KSLNRSDIAGKRIKLE---PSRPGGARR 327
LN ++ G+R+ +E PS PG RR
Sbjct: 276 HELNGKELFGRRLVVEYTRPSLPGPRRR 303
>sp|O65001|TE1_MAIZE Protein terminal ear1 OS=Zea mays GN=TE1 PE=2 SV=1
Length = 656
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 83/143 (58%), Gaps = 17/143 (11%)
Query: 663 DTRTTLMIKNIPNKYTSKMLLAAID---------------ENHKGTYDFLYLPIDFKNKC 707
DTRTT+MI+NIPNKY+ K+LL +D E YDF+YLPIDF NKC
Sbjct: 438 DTRTTVMIRNIPNKYSQKLLLNMLDNHCIQSNEWIVASGEEQPFSAYDFVYLPIDFNNKC 497
Query: 708 NVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNSSLMN 767
NVGY F+N+ SP + Y+AF+ + WE +NS K+ + YAR+QG AL HF+NS
Sbjct: 498 NVGYGFVNLTSPEARVRLYKAFHKQPWEVYNSRKICQVTYARVQGLEALKEHFKNSKFPC 557
Query: 768 EDKRCRPILFH--SEGPEAGDQV 788
+ P+ F +G E D V
Sbjct: 558 DSDEYLPVAFSPARDGKELTDPV 580
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 46/204 (22%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGDIRTL-YTACKHRGFVMISYYDIRAARTAMRALQ 221
SR + + + + +++++ +G IR++ A G + ++DIRAA A+ ++
Sbjct: 86 SRVVVLGLVPPHAQEADVAQAMAPFGAIRSVDACAVASEGVATVHFFDIRAAELALTCVR 145
Query: 222 NKPLRRR-----------------------------------------KLDIHFSIPKDN 240
+ +R++ + HF+ D
Sbjct: 146 EQHMRQQSRLGQLYAAAAVAPAWAPAPTPQAWDWPHPNDDGRGLVLGHAVWAHFATGAD- 204
Query: 241 PSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEA 300
D D N+G+LVV + P VS DLRQ+F A+G++K++RE+ + HKF++F+D R A
Sbjct: 205 --DGD-NRGSLVVLSPLPGVSVADLRQVFQAFGDLKDVRESAQRPSHKFVDFFDTRDAAR 261
Query: 301 ALKSLNRSDIAGKRIKLEPSRPGG 324
AL LN ++ G+R+ +E +RP G
Sbjct: 262 ALAELNGQELFGRRLVVEFTRPSG 285
>sp|Q652K6|OML6_ORYSJ Protein MEI2-like 6 OS=Oryza sativa subsp. japonica GN=ML6 PE=2
SV=1
Length = 323
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 69/149 (46%), Gaps = 21/149 (14%)
Query: 664 TRTTLMIKNIPNKYTSKMLLAAIDENH-------------------KGTYDFLYLPIDFK 704
T T+LMI+NIPNK+ L+A +D++ K YDF Y+PIDFK
Sbjct: 168 TTTSLMIRNIPNKFLKARLMAILDQHCADENGKCHRRGGGGGRSVVKSEYDFFYVPIDFK 227
Query: 705 NKCNVGYAFINMLSPLHIIPFYEAFNGKKWEKFNSEKVASLAYARIQGRAALVAHFQNSS 764
N GYAF+NM + +W+ S KV + A IQG A VAHF S
Sbjct: 228 TGFNKGYAFVNMTTATAARRLRAFLQDHRWDAAMSGKVCDVVPAAIQGLDAFVAHFSASC 287
Query: 765 LMNEDKRCRPILFHSEGPEAGDQVTQEQL 793
K P+ F E P G+Q T+ +
Sbjct: 288 FPCRTKEFLPVWF--EPPRDGEQQTKAHV 314
>sp|Q9FPJ8|RB45A_ARATH Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana
GN=RBP45A PE=2 SV=1
Length = 387
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 22/183 (12%)
Query: 160 EHPSRTLFVRNINSNVEDSELRALFEQ-YGDIRTLY-----TACKHRGFVMISYYDIRAA 213
E P T+FV ++ V D L F+ YG ++ T + +G+ + + D
Sbjct: 150 EGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQ 209
Query: 214 RTAMRALQNKPLRRRKLDIHFSIPKD---------------NPSDKDLNQGTLVVFNLDP 258
AM + + R + I + K+ N D D N T+ V LD
Sbjct: 210 MRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDA 269
Query: 259 SVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 318
+V++++L+ IFG +GE+ ++ P KR F+++ + +AE AL LN + + G+ I+L
Sbjct: 270 NVTDDELKSIFGQFGELLHVKIPPGKR-CGFVQYANKASAEHALSVLNGTQLGGQSIRLS 328
Query: 319 PSR 321
R
Sbjct: 329 WGR 331
>sp|Q8LPQ9|FPA_ARATH Flowering time control protein FPA OS=Arabidopsis thaliana GN=FPA
PE=2 SV=2
Length = 901
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQN 222
S L+V ++ +S+L LF +YGDI + T RGF I Y + A A ALQ
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRI-TVYSSRGFAFIYYRHVEEAVAAKEALQG 75
Query: 223 KPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETP 282
L ++ I ++ P P +L V + P+VS +DL + F +G++++ R
Sbjct: 76 ANLNGSQIKIEYARPA-KPCK------SLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFL- 127
Query: 283 HKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 318
+R FI++Y++ A A KS+N + G ++++
Sbjct: 128 RERKTAFIDYYEMDDALQA-KSMNGKPMGGSFLRVD 162
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 243 DKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAAL 302
D L V +L P + DL ++FG YG++ I R FI + V A AA
Sbjct: 12 DSGFQSNNLWVGSLTPETTESDLTELFGRYGDIDRI-TVYSSRGFAFIYYRHVEEAVAAK 70
Query: 303 KSLNRSDIAGKRIKLEPSRPGGARRNLML 331
++L +++ G +IK+E +RP ++L +
Sbjct: 71 EALQGANLNGSQIKIEYARPAKPCKSLWV 99
>sp|Q6ET49|OML7_ORYSJ Protein MEI2-like 7 OS=Oryza sativa subsp. japonica GN=OML7 PE=2
SV=1
Length = 389
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 20/124 (16%)
Query: 666 TTLMIKNIPNKYTSKMLLAAIDEN-------------HKGTYDFLYLPIDF-----KNKC 707
TT+M++NIPNK T ++ +D++ + YD +Y+ +DF +
Sbjct: 216 TTVMVRNIPNKLTRSDMVRLLDDHCARENRRRGRGGEPRAEYDLVYVRMDFGMCNKERSS 275
Query: 708 NVGYAFINMLSPLHIIPFYEAFNGKKWEK--FNSEKVASLAYARIQGRAALVAHFQNSSL 765
N+GYAF+N + A +G +W++ F+S K+ + ARIQG+ ALV HF ++
Sbjct: 276 NMGYAFVNFTTAEAARGLQRALHGCRWKRSAFDSGKIIDIRAARIQGKDALVRHFGRTTY 335
Query: 766 MNED 769
D
Sbjct: 336 YECD 339
>sp|Q9LEB4|RBP45_NICPL Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia
GN=RBP45 PE=1 SV=1
Length = 409
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 165 TLFVRNINSNVEDSELRALFEQ-YGDIR-----TLYTACKHRGFVMISYYDIRAARTAMR 218
T+FV ++ ++V D L+ F+ Y +R T + +G+ + + D AM
Sbjct: 177 TIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMT 236
Query: 219 ALQNKPLRRRKLDI---------------HFSIPKDNPSDKDLNQGTLVVFNLDPSVSNE 263
+ R + I + P+ + D N T+ V LDP+V+ E
Sbjct: 237 EMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTIFVGGLDPTVAEE 296
Query: 264 DLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSR 321
LRQ+F YGE+ ++ KR F++F +AE AL SLN + + G+ I+L R
Sbjct: 297 HLRQVFSPYGELVHVKIVAGKR-CGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGR 353
>sp|P13383|NUCL_RAT Nucleolin OS=Rattus norvegicus GN=Ncl PE=1 SV=3
Length = 713
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 10/172 (5%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQN 222
+RTL +N++ N+ + EL+ +FE +IR + + +G I + A + Q
Sbjct: 396 ARTLLAKNLSFNITEDELKEVFEDAVEIRLVSQDGRSKGIAYIEFKSEADAEKNLEEKQG 455
Query: 223 KPLRRRKLDIHFSIPKDNPSDKDLNQG-------TLVVFNLDPSVSNEDLRQIFGAYGEV 275
+ R + ++++ K ++ TLV+ NL S + E L+++F +
Sbjct: 456 AEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFI 515
Query: 276 KEIRETPH--KRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGA 325
K + + PH + + FIEF A+ AL S N+ +I G+ I+LE P G+
Sbjct: 516 K-VPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPRGS 566
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTA-CKHRGFVMISYYDIRAARTAMRALQ 221
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 488 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCN 547
Query: 222 NKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIF--GAYGEVKEIR 279
+ R + + P+ +P+ + TL V L + E L++ F + R
Sbjct: 548 KMEIEGRTIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDR 607
Query: 280 ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 324
ET + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 608 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 652
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 166 LFVRNINSNVEDSELR-ALFEQYG-------DIRTLYTACKHRGFVMISYYDIRAARTAM 217
LF+ N+N N +EL+ A+ E + D+RT +R F Y D +A
Sbjct: 313 LFIGNLNPNKSVAELKVAISELFAKNDLAAVDVRT----GTNRKF---GYVDFESAEDLE 365
Query: 218 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
+AL+ L+ +I PK S K TL+ NL +++ ++L+++F E++
Sbjct: 366 KALELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDAVEIRL 425
Query: 278 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 317
+ + + +IEF AE L+ ++I G+ + L
Sbjct: 426 VSQDGRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSL 465
>sp|P09405|NUCL_MOUSE Nucleolin OS=Mus musculus GN=Ncl PE=1 SV=2
Length = 707
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQN 222
+RTL +N++ N+ + EL+ +FE +IR + K +G I + A + Q
Sbjct: 394 ARTLLAKNLSFNITEDELKEVFEDAMEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQG 453
Query: 223 KPLRRRKLDIHFSIPKDNPSDKDLNQG-------TLVVFNLDPSVSNEDLRQIFGAYGEV 275
+ R + ++++ K ++ TLV+ NL S + E L ++F +
Sbjct: 454 AEIDGRSVSLYYTGEKGQRQERTGKTSTWSGESKTLVLSNLSYSATKETLEEVFEKATFI 513
Query: 276 KEIRETPH--KRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 318
K + + PH + + FIEF A+ AL S N+ +I G+ I+LE
Sbjct: 514 K-VPQNPHGKPKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLE 557
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 166 LFVRNINSNVEDSELR-ALFEQYG-------DIRTLYTACKHRGFVMISYYDIRAARTAM 217
LF+ N+N N +EL+ A+ E + D+RT +R F Y D +A
Sbjct: 311 LFIGNLNPNKSVNELKFAISELFAKNDLAVVDVRT----GTNRKF---GYVDFESAEDLE 363
Query: 218 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
+AL+ L+ +I PK S K TL+ NL +++ ++L+++F E++
Sbjct: 364 KALELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDAMEIRL 423
Query: 278 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 317
+ + + +IEF AE L+ ++I G+ + L
Sbjct: 424 VSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSL 463
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 11/167 (6%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTA-CKHRGFVMISYYDIRAARTAMRALQ 221
S+TL + N++ + L +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 486 SKTLVLSNLSYSATKETLEEVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 222 NKPLRRR--KLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIF--GAYGEVKE 277
+ R +L++ S + PS TL V L + E L++ F +
Sbjct: 546 KMEIEGRTIRLELQGSNSRSQPSK------TLFVKGLSEDTTEETLKESFEGSVRARIVT 599
Query: 278 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 324
RET + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 600 DRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 646
>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5
PE=1 SV=3
Length = 682
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 161 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACK---HR--GFVMISYYDIRAART 215
HP+ +L+V +++ +V +S L LF Q + L C+ HR G+ +++ + A
Sbjct: 56 HPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNL-RVCRDLTHRSLGYAYVNFANPEDASR 114
Query: 216 AMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEV 275
AM +L P+R R + I S +PS + +G + + NLD S+ N+ L + F ++G +
Sbjct: 115 AMESLNYAPIRDRPIRIMLS--NRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTI 172
Query: 276 KEIR----ETPHKRHHKFIEFYDVRAAEAALKSLN 306
+ + + F++F A+AA+ LN
Sbjct: 173 LSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 207
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 41/225 (18%)
Query: 159 GEHPSRT-LFVRNINSNVEDSELRALFEQYGDIRTLYT----ACKHRGFVMISYYDIRAA 213
G PS T ++V+N+ + D EL+ F +YGDI + + R F +++ AA
Sbjct: 233 GAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAA 292
Query: 214 RTAMRAL---------------QNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDP 258
A+ + Q K R +L F + + +K L L + NLD
Sbjct: 293 AVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEK-LQGSNLYLKNLDD 351
Query: 259 SVSNEDLRQIFGAYGEVKEIRETPH----KRHHKFIEFYDVRAAEAALKSLNRSDIAGKR 314
SV++E L+++F YG V + + R F+ + + A A+K +N GK
Sbjct: 352 SVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMN-----GKM 406
Query: 315 IKLEPSRPGGARRNLMLQLNQELEQDESRI--LQHQVGSPITNSP 357
I R+ L + L Q E+ ++ + L Q+ SP T SP
Sbjct: 407 I---------GRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSP 442
>sp|Q5RF26|NUCL_PONAB Nucleolin OS=Pongo abelii GN=NCL PE=2 SV=3
Length = 712
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 155 EHPYG-----EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYD 209
E P G E +RTL +N+ V EL+ +FE +IR + K +G I +
Sbjct: 381 EKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKT 440
Query: 210 IRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQG----------TLVVFNLDPS 259
A Q + R + ++++ K ++D G TLV+ NL S
Sbjct: 441 EADAEKTFEEKQGTEIDGRSISLYYTGEKGQ--NQDYRGGKNSTWSGESKTLVLSNLSYS 498
Query: 260 VSNEDLRQIFGAYGEVKEIRETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 318
+ E L+++F +K + K + + FIEF A+ AL S N+ +I G+ I+LE
Sbjct: 499 ATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE 558
Query: 319 PSRPGGA 325
P G+
Sbjct: 559 LQGPRGS 565
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTA-CKHRGFVMISYYDIRAARTAMRALQ 221
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 487 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCN 546
Query: 222 NKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI--R 279
+ + R + + P+ +P+ + TL V L + E L++ F + + R
Sbjct: 547 KREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDR 606
Query: 280 ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 324
ET + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 607 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 651
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 166 LFVRNINSNVEDSELRA----LFEQ----YGDIRTLYTACKHRGFVMISYYDIRAARTAM 217
LFV N+N N EL+ +F + D+R T R F Y D +A
Sbjct: 311 LFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMT----RKF---GYVDFESAEDLE 363
Query: 218 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
+AL+ L+ +I PK S K+ + TL+ NL V+ ++L+++F E++
Sbjct: 364 KALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRL 423
Query: 278 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 317
+ + + +IEF AE + ++I G+ I L
Sbjct: 424 VSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISL 463
>sp|P19338|NUCL_HUMAN Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3
Length = 710
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 155 EHPYG-----EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYD 209
E P G E +RTL +N+ V EL+ +FE +IR + K +G I +
Sbjct: 379 EKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKT 438
Query: 210 IRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQG----------TLVVFNLDPS 259
A Q + R + ++++ K ++D G TLV+ NL S
Sbjct: 439 EADAEKTFEEKQGTEIDGRSISLYYTGEKGQ--NQDYRGGKNSTWSGESKTLVLSNLSYS 496
Query: 260 VSNEDLRQIFGAYGEVKEIRETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 318
+ E L+++F +K + K + + FIEF A+ AL S N+ +I G+ I+LE
Sbjct: 497 ATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE 556
Query: 319 PSRPGGA 325
P G+
Sbjct: 557 LQGPRGS 563
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTA-CKHRGFVMISYYDIRAARTAMRALQ 221
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 485 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCN 544
Query: 222 NKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI--R 279
+ + R + + P+ +P+ + TL V L + E L++ F + + R
Sbjct: 545 KREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDR 604
Query: 280 ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 324
ET + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 605 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 649
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 166 LFVRNINSNVEDSELRA----LFEQ----YGDIRTLYTACKHRGFVMISYYDIRAARTAM 217
LFV N+N N EL+ +F + D+R T R F Y D +A
Sbjct: 309 LFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMT----RKF---GYVDFESAEDLE 361
Query: 218 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
+AL+ L+ +I PK S K+ + TL+ NL V+ ++L+++F E++
Sbjct: 362 KALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRL 421
Query: 278 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 317
+ + + +IEF AE + ++I G+ I L
Sbjct: 422 VSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISL 461
>sp|Q4R4J7|NUCL_MACFA Nucleolin OS=Macaca fascicularis GN=NCL PE=2 SV=3
Length = 711
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 155 EHPYG-----EHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYD 209
E P G E +RTL +N+ V EL+ +FE +IR + K +G I +
Sbjct: 380 EKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKT 439
Query: 210 IRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQG----------TLVVFNLDPS 259
A Q + R + ++++ K ++D G TLV+ NL S
Sbjct: 440 EADAEKTFEEKQGTEIDGRSISLYYTGEKGQ--NQDYRGGKNSTWSGESKTLVLSNLSYS 497
Query: 260 VSNEDLRQIFGAYGEVKEIRETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 318
+ E L+++F +K + K + + FIEF A+ AL S N+ +I G+ I+LE
Sbjct: 498 ATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLE 557
Query: 319 PSRPGGA 325
P G+
Sbjct: 558 LQGPRGS 564
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTA-CKHRGFVMISYYDIRAARTAMRALQ 221
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 486 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCN 545
Query: 222 NKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI--R 279
+ + R + + P+ +P+ + TL V L + E L++ F + + R
Sbjct: 546 KREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDR 605
Query: 280 ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 324
ET + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 606 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 650
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 166 LFVRNINSNVEDSELRA----LFEQ----YGDIRTLYTACKHRGFVMISYYDIRAARTAM 217
LFV N+N N EL+ +F + D+R T R F Y D +A
Sbjct: 310 LFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMT----RKF---GYVDFESAEDLE 362
Query: 218 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
+AL+ L+ +I PK S K+ + TL+ NL V+ ++L+++F E++
Sbjct: 363 KALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRL 422
Query: 278 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 317
+ + + +IEF AE + ++I G+ I L
Sbjct: 423 VSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISL 462
>sp|Q8C7Q4|RBM4_MOUSE RNA-binding protein 4 OS=Mus musculus GN=Rbm4 PE=1 SV=1
Length = 361
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 225
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 226 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 285
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKASTK------LHVGNISPTCTNQELRAKFEEYGPVIECDIV---K 111
Query: 286 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 320
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|P20397|NUCL_XENLA Nucleolin OS=Xenopus laevis GN=ncl PE=2 SV=3
Length = 651
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 160 EHPSRTLFVRNINSNVEDSELRALFEQYGDIRT-LYTACKHRGFVMISYYDIRAARTAMR 218
E SRTLFV+NI + EL+ +FE DIR ++G + + + A A+
Sbjct: 321 ERDSRTLFVKNIPYSTTVEELQEIFENAKDIRIPTGKDGSNKGIAYVEFSNEDEANKALE 380
Query: 219 ALQNKPLRRRKLDIHFSIPK-DNPSDKDLNQG---TLVVFNLDPSVSNEDLRQIFGAYGE 274
Q + R + + F+ K N +K +G LVV NL S + + LR++F
Sbjct: 381 EKQGAEIEGRSIFVDFTGEKSQNSGNKKGPEGDSKVLVVNNLSYSATEDSLREVFEKATS 440
Query: 275 VKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 318
++ + + FIEF A+ A+ S N ++I G+ I+LE
Sbjct: 441 IRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLE 484
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 7/205 (3%)
Query: 125 SLEDLEDYDIFGSGGGMELEGEPQESLSMREHPYGEHPSRTLFVRNINSNVEDSELRALF 184
+LE+ + +I G ++ GE ++ ++ P G+ S+ L V N++ + + LR +F
Sbjct: 378 ALEEKQGAEIEGRSIFVDFTGEKSQNSGNKKGPEGD--SKVLVVNNLSYSATEDSLREVF 435
Query: 185 EQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDK 244
E+ IR + +GF I + A+ AM + N + R + + FS
Sbjct: 436 EKATSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQGGGPQGGG 495
Query: 245 DLNQG---TLVVFNLDPSVSNEDLRQIFGAYGEVKEI--RETPHKRHHKFIEFYDVRAAE 299
TL V L + E L++ F + + R+T + F++F A+
Sbjct: 496 RGGSAQSKTLFVRGLSEDTTEETLKEAFDGSVNARIVTDRDTGASKGFGFVDFSTAEDAK 555
Query: 300 AALKSLNRSDIAGKRIKLEPSRPGG 324
AA +++ +I G ++ L+ ++P G
Sbjct: 556 AAKEAMEDGEIDGNKVTLDFAKPKG 580
>sp|Q3MHX3|RBM4_BOVIN RNA-binding protein 4 OS=Bos taurus GN=RBM4 PE=2 SV=1
Length = 362
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 225
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 226 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 285
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKTSTK------LHVGNISPTCTNKELRAKFEEYGPVIECDIV---K 111
Query: 286 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 320
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q9BDY9|RBM4_RABIT RNA-binding protein 4 OS=Oryctolagus cuniculus GN=RBM4 PE=2 SV=1
Length = 359
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 225
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 226 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 285
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKASTK------LHVGNISPTCTNQELRAKFEEYGPVIECDIV---K 111
Query: 286 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 320
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|P08199|NUCL_MESAU Nucleolin OS=Mesocricetus auratus GN=NCL PE=1 SV=2
Length = 714
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQN 222
+RTL +N++ N+ + EL+ +FE +IR + K +G I + A + Q
Sbjct: 393 ARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKGIAYIEFKSEADAEKNLEEKQG 452
Query: 223 KPLRRRKLDIHFSIPKDNPSDKDLNQG-------TLVVFNLDPSVSNEDLRQIFGAYGEV 275
+ R + ++++ K ++ TLV+ NL S + E L+++F +
Sbjct: 453 AEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKATFI 512
Query: 276 KEIRETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGA 325
K + K + + FIEF A+ AL S N+ +I G+ I+LE P G+
Sbjct: 513 KVPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPRGS 563
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Query: 144 EGEPQESLSMREHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRT-LYTACKHRGF 202
+G+ QE GE S+TL + N++ + + L+ +FE+ I+ K +G+
Sbjct: 468 KGQRQERTGKNSTWSGE--SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQQGKSKGY 525
Query: 203 VMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSN 262
I + A+ A+ + + R + + P+ +P+ + TL V L +
Sbjct: 526 AFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTE 585
Query: 263 EDLRQIF--GAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 320
E L++ F + RET + F++F A+AA +++ +I G ++ L+ +
Sbjct: 586 ETLKESFEGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 645
Query: 321 RPGG 324
+P G
Sbjct: 646 KPKG 649
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 166 LFVRNINSNVEDSELR-ALFEQYG-------DIRTLYTACKHRGFVMISYYDIRAARTAM 217
LF+ N+N N +EL+ A+ E + D+RT +R F Y D +A
Sbjct: 310 LFIGNLNPNKSVAELKVAISEPFAKNDLAVVDVRT----GTNRKF---GYVDFESAEDLE 362
Query: 218 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
+AL+ L+ +I PK S K TL+ NL +++ ++L+++F E++
Sbjct: 363 KALELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDALEIRL 422
Query: 278 IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 317
+ + + +IEF AE L+ ++I G+ + L
Sbjct: 423 VSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSL 462
>sp|Q9BQ04|RBM4B_HUMAN RNA-binding protein 4B OS=Homo sapiens GN=RBM4B PE=1 SV=1
Length = 359
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 225
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 226 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 285
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKASTK------LHVGNISPTCTNQELRAKFEEYGPVIECDIV---K 111
Query: 286 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 320
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q06AT9|RBM4B_PIG RNA-binding protein 4B OS=Sus scrofa GN=RBM4B PE=2 SV=1
Length = 359
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 225
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 226 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 285
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKASTK------LHVGNISPTCTNQELRAKFEEYGPVIECDIV---K 111
Query: 286 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 320
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q64LC9|RBM4B_RAT RNA-binding protein 4B OS=Rattus norvegicus GN=Rbm4b PE=2 SV=2
Length = 357
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 225
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 226 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 285
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKASTK------LHVGNISPTCTNQELRAKFEEYGPVIECDIV---K 111
Query: 286 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 320
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q8VE92|RBM4B_MOUSE RNA-binding protein 4B OS=Mus musculus GN=Rbm4b PE=1 SV=1
Length = 357
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 225
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 226 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 285
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKASTK------LHVGNISPTCTNQELRAKFEEYGPVIECDIV---K 111
Query: 286 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 320
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q4R979|RBM4_MACFA RNA-binding protein 4 OS=Macaca fascicularis GN=RBM4 PE=2 SV=1
Length = 364
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 225
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 226 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 285
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKTSTK------LHVGNISPTCTNKELRAKFEEYGPVIECDIV---K 111
Query: 286 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 320
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|Q9BWF3|RBM4_HUMAN RNA-binding protein 4 OS=Homo sapiens GN=RBM4 PE=1 SV=1
Length = 364
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPL 225
LF+ N+ + E+R+LFEQYG + K+ GFV I D AA A+R L + L
Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLEC-DIIKNYGFVHIE--DKTAAEDAIRNLHHYKL 60
Query: 226 RRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 285
+++ S K S K L V N+ P+ +N++LR F YG V E +
Sbjct: 61 HGVNINVEASKNKSKTSTK------LHVGNISPTCTNKELRAKFEEYGPVIECDIV---K 111
Query: 286 HHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPS 320
+ F+ A A++ L+ ++ GKR+ ++ S
Sbjct: 112 DYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLS 146
>sp|P15771|NUCL_CHICK Nucleolin OS=Gallus gallus GN=NCL PE=1 SV=1
Length = 694
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 140 GMELEGEPQESLSMREHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIR-TLYTACK 198
G+E++ E +S + E +RTLFV+N+ V + E++ +FE ++R L
Sbjct: 347 GLEIKLEKAKSKESLKENKKERDARTLFVKNLPYRVTEDEMKNVFENALEVRLVLNKEGS 406
Query: 199 HRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDK----DLNQGTLVVF 254
+G I + A A+ Q + R + I ++ K + + TL+V
Sbjct: 407 SKGMAYIEFKTEAEAEKALEEKQGTEVDGRAMVIDYTGEKSQQESQKGGGERESKTLIVN 466
Query: 255 NLDPSVSNEDLRQIFGAYGEVKEIRETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGK 313
NL + S E L+++F +K + + + + F+EF A+ AL S N ++I G+
Sbjct: 467 NLSYAASEETLQELFKKATSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGR 526
Query: 314 RIKLEPSRPGGARRNL 329
I+LE S P + N+
Sbjct: 527 AIRLEFSSPSWQKGNM 542
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 9/175 (5%)
Query: 159 GEHPSRTLFVRNINSNVEDSELRALFEQYGDIRT-LYTACKHRGFVMISYYDIRAARTAM 217
GE S+TL V N++ + L+ LF++ I+ + +G+ + + A+ A+
Sbjct: 456 GERESKTLIVNNLSYAASEETLQELFKKATSIKMPQNNQGRPKGYAFVEFPTAEDAKEAL 515
Query: 218 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQG------TLVVFNLDPSVSNEDLRQIFGA 271
+ N + R + + FS P + + G TL V L + E LR+ F
Sbjct: 516 NSCNNTEIEGRAIRLEFSSPSWQKGNMNARGGFNQQSKTLFVRGLSEDTTEETLRESFEG 575
Query: 272 YGEVKEI--RETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 324
+ + R+T + F++F A+AA +++ +I G ++ L+ ++P G
Sbjct: 576 SISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDFAKPKG 630
>sp|Q93W34|RP45C_ARATH Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana
GN=RBP45C PE=2 SV=1
Length = 415
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 21/191 (10%)
Query: 151 LSMREHPYGEHPSRTLFVRNINSNVEDSELRALFEQ-YGDIRTLY-----TACKHRGFVM 204
L E E P T+FV ++ +V D L F+ Y ++ T + +G+
Sbjct: 160 LGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGF 219
Query: 205 ISYYDIRAARTAMRALQ-----NKPLR------RRKLDIH---FSIPKDNPSDKDLNQGT 250
+ + D AM + ++P+R ++ L + + + N + D T
Sbjct: 220 VRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTT 279
Query: 251 LVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDI 310
+ V +D SV+ +DL+ +FG +GE+ ++ P + F+++ + AE AL LN + +
Sbjct: 280 IFVGAVDQSVTEDDLKSVFGQFGELVHVK-IPAGKRCGFVQYANRACAEQALSVLNGTQL 338
Query: 311 AGKRIKLEPSR 321
G+ I+L R
Sbjct: 339 GGQSIRLSWGR 349
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 87/186 (46%), Gaps = 13/186 (6%)
Query: 164 RTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRG---FVMISYYDIRAARTAMRAL 220
RTL+V N++ +V + + LF Q G ++ +H + + +Y+ R A A+ A+
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 221 QNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR- 279
+ + +++ ++++ + N + V +L P ++ ED++ F +G++ + R
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARV 128
Query: 280 ----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL-----EPSRPGGARRNLM 330
T + + F+ FY+ AE A+ + + G++I+ +P P + N
Sbjct: 129 VKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNT 188
Query: 331 LQLNQE 336
QL E
Sbjct: 189 KQLRFE 194
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 166 LFVRNINSNVEDSELRALFEQYG---DIRTL--YTACKHRGFVMISYYDIRAARTAMRAL 220
+FV +++ + ++++ F +G D R + K +G+ +S+Y+ A A+ +
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158
Query: 221 QNKPLRRRKLDIHFSI-----PKDNPSDKD--------LNQG-----TLVVFNLDPSVSN 262
+ L R++ +++ PK + +NQ T+ + +++
Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 218
Query: 263 EDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKL 317
+ +RQ F +G++ EIR P K + F+ F +A A+ S+N + I G +K
Sbjct: 219 QLMRQTFSPFGQIMEIRVFPEK-GYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 272
>sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pab1 PE=1 SV=2
Length = 653
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 157 PYGEHP-SRTLFVRNINSNVEDSELRALFEQYG---DIRTLYTACKHR--GFVMISYYDI 210
P G P S +L+V ++ +V ++ L LF G IR A R G+ ++++++
Sbjct: 72 PSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNM 131
Query: 211 RAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFG 270
A+ L ++ R I +S + +PS + + G + + NLDP++ N+ L F
Sbjct: 132 EDGEKALDELNYTLIKGRPCRIMWS--QRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFS 189
Query: 271 AYGEVKEIR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 315
A+G++ + E + + + F+ F V +A AA++ +N + K++
Sbjct: 190 AFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKV 238
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 96/209 (45%), Gaps = 27/209 (12%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTAC----KHRGFVMISYYDIRAARTAMRALQ 221
++++N+++ + + E LF Q+G+I +L K RGF ++Y + A+ A+ L
Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELN 322
Query: 222 NKPLRRRKLDIHFSIPKDNPSDKDLN--------------QGT-LVVFNLDPSVSNEDLR 266
+K + +KL + + K + +++L QG L + NL V +E L+
Sbjct: 323 DKEYKGKKLYVGRA-QKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLK 381
Query: 267 QIFGAYGEVKEIR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 322
F A+G + + E + F+ + A A+ +N+ +AGK + + ++
Sbjct: 382 AEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQR 441
Query: 323 GGARRNLMLQLNQELEQDESRILQHQVGS 351
RR+ QL +++ LQ QV +
Sbjct: 442 KEVRRS---QLEAQIQARNQFRLQQQVAA 467
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/162 (17%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTAMRALQ 221
+F++N++ +++ L F +G I + A +G+ + + + +A A+ +
Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVN 229
Query: 222 NKPLRRRKLDIHFSIPKDNPSDK----DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
L +K+ + + + K N + + NLD ++ ++ +FG +GE+
Sbjct: 230 GMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITS 289
Query: 278 IR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 315
+ + R F+ + + A+ A+ LN + GK++
Sbjct: 290 LSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKL 331
>sp|Q9SAB3|RB45B_ARATH Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana
GN=RBP45B PE=1 SV=1
Length = 405
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 22/183 (12%)
Query: 160 EHPSRTLFVRNINSNVEDSELRALFE-QYGDIRTLYTAC-----KHRGFVMISYYDIRAA 213
+ P T+FV ++ ++V D L F Y ++ + +G+ + + D
Sbjct: 151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQ 210
Query: 214 RTAMRALQNKPLRRRKLDIHFSIPKDN---------------PSDKDLNQGTLVVFNLDP 258
AM + P R + I + K +D D N T+ V LD
Sbjct: 211 IRAMTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDA 270
Query: 259 SVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLE 318
SV+++ L+ +F YGE+ ++ P + F++F + AE AL+ LN + G ++L
Sbjct: 271 SVTDDHLKNVFSQYGEIVHVK-IPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLS 329
Query: 319 PSR 321
R
Sbjct: 330 WGR 332
>sp|Q4VXU2|PAP1L_HUMAN Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L
PE=2 SV=1
Length = 614
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH---RGFVMISYYDIRAARTAMRALQN 222
+F++N+ ++++ L F +G+I + AC RGF + + AA+ A+ +
Sbjct: 101 IFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNG 160
Query: 223 KPLRRRKLDI-HFSIPKDNPSD---KDLNQGTLVVFNLDPSVSNEDLRQIFGAYGE---V 275
L RK+ + HF ++ ++ + L + V NL V + L+ +F +G+ V
Sbjct: 161 MLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSV 220
Query: 276 KEIRE-TPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLN 334
K +R+ + H R F+ F A+ A+ +N +++G+ + ++ R+N + +
Sbjct: 221 KVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRF 280
Query: 335 QELEQDESRILQ 346
++++QD R Q
Sbjct: 281 EQMKQDRLRRYQ 292
Score = 37.7 bits (86), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 79/186 (42%), Gaps = 21/186 (11%)
Query: 166 LFVRNINSNVEDSELRALFEQYGD---IRTLYTACKH-RGFVMISYYDIRAARTAMRALQ 221
++V+N+ +V++ L+ LF Q+G ++ + H R F +++ A+ A+ +
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMN 252
Query: 222 NKPLRRRKL---DIHFSIPKDNPSDKDLNQGT-----------LVVFNLDPSVSNEDLRQ 267
K + R L + + N + Q L V NLD S+ ++ LR+
Sbjct: 253 GKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRK 312
Query: 268 IFGAYGEV---KEIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 324
F YG + K + E H + F+ F A A+ +N + K + + ++
Sbjct: 313 EFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKE 372
Query: 325 ARRNLM 330
R+ ++
Sbjct: 373 ERKAIL 378
>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=pab1 PE=2 SV=2
Length = 732
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTAMRALQ 221
+F++N++S +++ L F +G+I + A +G+ + Y AA A++ +
Sbjct: 132 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVN 191
Query: 222 NKPLRRRKLDIHFSIPKDNPSDK----DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
L +K+ + I K + K N + + N+DP V +E+ R++F +GE+
Sbjct: 192 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITS 251
Query: 278 I---RETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 315
R++ K R F+ F +A+AA++ +N ++ +++
Sbjct: 252 ATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKL 293
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 23/138 (16%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLY----TACKHRGFVMISYYDIRAARTAMRALQ 221
++++NI+ VED E R LFE++G+I + + K RGF +++ +A+ A+ +
Sbjct: 225 IYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMN 284
Query: 222 NKPLRRRKLDIHFSIPKDNPSDKDLN--------------QGT-LVVFNLDPSVSNEDLR 266
+K +R +KL + + K + +++L QG L V NL V ++ LR
Sbjct: 285 DKEVRSQKLYVGRA-QKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVDDDKLR 343
Query: 267 QIFGAYGEV---KEIRET 281
++FG YG + K +R+T
Sbjct: 344 ELFGPYGTITSAKVMRDT 361
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 11/162 (6%)
Query: 163 SRTLFVRNINSNVEDSELRALFE---QYGDIRTLYTACKHR--GFVMISYYDIRAARTAM 217
S +L+V ++ +V ++ L LF Q IR A R G+ ++Y D A+
Sbjct: 41 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERAL 100
Query: 218 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
L ++ + I +S + +P+ + QG + + NLD ++ N+ L F A+G +
Sbjct: 101 DELNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS 158
Query: 278 IR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 315
+ E + + F+ + AA A+K +N + K++
Sbjct: 159 CKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 200
Score = 37.4 bits (85), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 249 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR-----ETPHKRHHKFIEFYDVRAAEAALK 303
+L V LDPSV+ L ++F + G+V IR T + ++ + D E AL
Sbjct: 42 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALD 101
Query: 304 SLNRSDIAGKRIKL 317
LN + I GK ++
Sbjct: 102 ELNYTLIKGKPCRI 115
>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3
PE=2 SV=1
Length = 660
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 161 HPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHR-----GFVMISYYDIRAART 215
HP+ +L+ +++ V ++ L LF+ ++ ++ C+ + G+ I++ + A
Sbjct: 46 HPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSV-RVCRDQNRRSLGYAYINFSNPNDAYR 104
Query: 216 AMRALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEV 275
AM AL PL R + I S +PS + +G + + NLD S+ N+ L + F ++G +
Sbjct: 105 AMEALNYTPLFDRPIRIMLS--NRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTI 162
Query: 276 KEIR----ETPHKRHHKFIEFYDVRAAEAALKSLN 306
+ T + + F++F +A+AA+ LN
Sbjct: 163 LSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197
Score = 41.6 bits (96), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 27/184 (14%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYT----ACKHRGFVMISYYDIRAARTAMRAL- 220
++V+N+ + + ELR F ++G I + + R F +++ AA +A+ +
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMN 290
Query: 221 --------------QNKPLRRRKLDIHFSIPKDNPSDKDLNQGT-LVVFNLDPSVSNEDL 265
Q K R +L F + N +K +QG L + NLD SV +E L
Sbjct: 291 GISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEK--SQGANLYLKNLDDSVDDEKL 348
Query: 266 RQIFGAYGEVK--EIRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 323
+++F YG V ++ P F F E AL++L S++ GK I +P
Sbjct: 349 KEMFSEYGNVTSSKVMLNPQGMSRGF-GFVAYSNPEEALRAL--SEMNGKMIGRKPLYIA 405
Query: 324 GARR 327
A+R
Sbjct: 406 LAQR 409
Score = 38.1 bits (87), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRT----LYTACKHRGFVMISYYDIRAARTAMRALQ 221
L+++N++ +V+D +L+ +F +YG++ + L RGF ++Y + A A+ +
Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMN 393
Query: 222 NKPLRRRKLDIHFSIPKDN 240
K + R+ L I + K++
Sbjct: 394 GKMIGRKPLYIALAQRKED 412
>sp|Q4PC17|MRD1_USTMA Multiple RNA-binding domain-containing protein 1 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=MRD1 PE=3 SV=1
Length = 858
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 165 TLFVRNINSNVEDSELRALFEQYGDIRTLYTACK----------HRGFVMISYYDIRAAR 214
TL+V+N++ + D L A F D K G+ + + I AAR
Sbjct: 622 TLYVKNLSFSTTDERLTAFFHGLSDFAFARIQTKPDPRRPGARLSMGYGFVGFKSIDAAR 681
Query: 215 TAMRALQNKPLRRRKLDIHFS---IPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGA 271
TA +A+ K L L + F+ S +++ NL + D+R +F +
Sbjct: 682 TAQKAMDGKVLDAHTLVVTFARRNAEASTTSISSGGSTKILIKNLPFEATKRDIRDLFSS 741
Query: 272 YGEVKEIRETPHK-----RHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGAR 326
G++K +R P K R F+E+ VR A++A+++L + + G+ + L+ S
Sbjct: 742 QGQLKSVR-LPKKFDNTTRGFGFVEYSTVREAQSAMEALKHTHLLGRHLVLQWS------ 794
Query: 327 RNLMLQLNQELEQDESRILQHQVGS 351
+L Q+++ S+ QH V +
Sbjct: 795 -HLASSTQQQVDMQRSKTKQHFVNT 818
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 668 LMIKNIPNKYTSKMLLAAIDENHKGTYDFLYLPIDFKNKCNVGYAFINMLSPLHIIPFYE 727
L I+N+P + +LA + GT +++P+D + K + G AF++ P H + Y
Sbjct: 316 LFIRNLPFAASGDEILAFFESF--GTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAAYR 373
Query: 728 AFNGKKWE 735
A +G ++
Sbjct: 374 AKDGSTFQ 381
>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=pab1 PE=3 SV=1
Length = 731
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 76/144 (52%), Gaps = 23/144 (15%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRALQ 221
++++N++S ++D E R +FE++G+I + + K RGF +++ +A+ A+ +
Sbjct: 237 VYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMN 296
Query: 222 NKPLRRRKLDIHFSIPKDNPSDKDLN--------------QGT-LVVFNLDPSVSNEDLR 266
+K +R +KL + + K + +++L QG L V NL + +E LR
Sbjct: 297 DKEIRSQKLYVGRA-QKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLR 355
Query: 267 QIFGAYGEV---KEIRETPHKRHH 287
++FG YG + K +R+T +R
Sbjct: 356 ELFGPYGTITSAKVMRDTNVERDQ 379
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTAMRALQ 221
+F++N++S +++ L F +G+I + A +G+ + Y AA A++ +
Sbjct: 144 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 203
Query: 222 NKPLRRRKLDIHFSIPKDNPSDK----DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
L +K+ + I K + K N + + NLD + +++ R++F +GE+
Sbjct: 204 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITS 263
Query: 278 I---RETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 315
R+ K R F+ F +A+AA++ +N +I +++
Sbjct: 264 ATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKL 305
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 163 SRTLFVRNINSNVEDSELRALFE---QYGDIRTLYTACKHR--GFVMISYYDIRAARTAM 217
S +L+V ++ +V ++ L LF Q IR A R G+ ++Y + A+
Sbjct: 53 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 112
Query: 218 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
L ++ + I +S + +P+ + QG + + NLD ++ N+ L F A+G +
Sbjct: 113 EDLNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS 170
Query: 278 IR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 315
+ E + + + F+ + AA A+K +N + K++
Sbjct: 171 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 212
Score = 36.6 bits (83), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 241 PSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR-----ETPHKRHHKFIEFYDV 295
P+ + +L V LDPSV+ L ++F + G+V IR T + ++ + +
Sbjct: 46 PAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 105
Query: 296 RAAEAALKSLNRSDIAGKRIKL 317
E AL+ LN + I GK ++
Sbjct: 106 ADGERALEDLNYTLIKGKPCRI 127
>sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=PAB1 PE=3 SV=1
Length = 629
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 165 TLFVRNINSNVEDSELRALFEQYG---DIRTLYTACKHR--GFVMISYYDIRAARTAMRA 219
+L+V ++ +V ++ L +F G +R A R G+ +++++ A+
Sbjct: 47 SLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALEE 106
Query: 220 LQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR 279
L P++ R I +S + +P+ + G + + NLDP++ N+ L F A+G++ +
Sbjct: 107 LNYSPIKERPCRIMWS--QRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQILSCK 164
Query: 280 ----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNQ 335
E + R F+ + +AE+A++ +N + K++ + P P R +Q +
Sbjct: 165 IATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDR----MQSFE 220
Query: 336 ELEQDESRILQHQVGSPITNS 356
E + + + +G+ IT +
Sbjct: 221 EQKNSFTNVFIKNLGTEITEA 241
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 89/208 (42%), Gaps = 25/208 (12%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTAC----KHRGFVMISYYDIRAARTAMRALQ 221
+F++N+ + + ++E L ++G+ +++ + K GF + Y + A A+ L
Sbjct: 229 VFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHDVAVKAIDGLS 288
Query: 222 NKPLRRRKLDIHFSIPKDNPSD-----------KDLN--QGT-LVVFNLDPSVSNEDLRQ 267
+ KL + K +D + LN QG L + NLD ++ ++ LR
Sbjct: 289 ETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKNLDDTIDDDKLRA 348
Query: 268 IFGAYGEVKE----IRETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 323
F +G + + E + F+ + A A+ +N +AGK + + ++
Sbjct: 349 EFAPHGTITSAKVMVDEAGKSKGFGFVCYSSPEEATKAVTEMNHRLVAGKPLYVVLAQRK 408
Query: 324 GARRNLMLQLNQELEQDESRILQHQVGS 351
RR+ QL Q+++ LQ Q +
Sbjct: 409 DVRRS---QLQQQIQAKNQMRLQQQAAA 433
>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2
PE=1 SV=1
Length = 629
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 31/219 (14%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRAL- 220
++V+N+ + D +L+ F +YG I + K +GF +++ + A A+ +L
Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLN 276
Query: 221 --------------QNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLR 266
Q K R +L + + +DK L V NLDPS+S+E L+
Sbjct: 277 GHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADK-FQSSNLYVKNLDPSISDEKLK 335
Query: 267 QIFGAYGEVK--EIRETPH--KRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 322
+IF +G V ++ P+ + F+ F A A+ S ++GK I+ +P
Sbjct: 336 EIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAM-----SQLSGKMIESKPLYV 390
Query: 323 GGARR--NLMLQLNQELEQDESRILQHQVGSPITNSPPG 359
A+R + ++L + Q +Q VG + PPG
Sbjct: 391 AIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPG 429
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 83/165 (50%), Gaps = 13/165 (7%)
Query: 165 TLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHR------GFVMISYYDIRAARTAMR 218
+L+V +++ NV DS+L F Q G + T+ C+ G+ +++ + + A A++
Sbjct: 37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTV-RVCRDLVTRRSLGYGYVNFTNPQDAARAIQ 95
Query: 219 ALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI 278
L PL + + + +S +PS + G + + NLD S+ ++ L F ++G +
Sbjct: 96 ELNYIPLYGKPIRVMYS--HRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSC 153
Query: 279 R----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRIKLEP 319
+ + + + F+++ + +A+ A++ LN + K++ + P
Sbjct: 154 KVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGP 198
>sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=pab-1 PE=3 SV=1
Length = 764
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTAMRALQ 221
+F++N+++ +++ L F +G+I + A +G+ + Y AA A++ +
Sbjct: 150 IFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVN 209
Query: 222 NKPLRRRKLDIHFSIPKDNPSDK----DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
L +K+ + IPK + K N + V N++ V++E+ R++F +GEV
Sbjct: 210 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINNEVTDEEFRELFAKFGEVTS 269
Query: 278 ---IRETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 315
R+ K R F+ F AA A+ LN D G+ +
Sbjct: 270 SSLARDQEGKSRGFGFVNFTTHEAAAQAVDELNGKDFRGQDL 311
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 163 SRTLFVRNINSNVEDSELRALFEQYGD---IRTLYTACKHR--GFVMISYYDIRAARTAM 217
S +L+V ++ +V ++ L LF Q G IR A R G+ ++Y A+
Sbjct: 59 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 118
Query: 218 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
L ++ R I +S + +P+ + G + + NLD ++ N+ L F A+G +
Sbjct: 119 EELNYTLIKGRPCRIMWS--QRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILS 176
Query: 278 IR----ETPHKRHHKFIEFYDVRAAEAALKSLN 306
+ E + + + F+ + AA A+K +N
Sbjct: 177 CKVAQDEHGNSKGYGFVHYETDEAASQAIKHVN 209
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRALQ 221
++V+NIN+ V D E R LF ++G++ + A K RGF +++ AA A+ L
Sbjct: 243 VYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKSRGFGFVNFTTHEAAAQAVDELN 302
Query: 222 NKPLR-------------RRKLDIHFSIPKDNPSDKDLNQGT-LVVFNLDPSVSNEDLRQ 267
K R R+ ++ S + QG L + NL V ++ LR
Sbjct: 303 GKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDDKLRA 362
Query: 268 IFGAYGEV 275
+F YG +
Sbjct: 363 MFSEYGPI 370
>sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156)
GN=pab1 PE=3 SV=1
Length = 753
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTAMRALQ 221
+F++N+++ +++ L F +G+I + A +G+ + Y AA A++ +
Sbjct: 138 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 197
Query: 222 NKPLRRRKLDIHFSIPKDNPSDK----DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
L +K+ + I K + K N + + NLD +S E+ RQ+F +GE+
Sbjct: 198 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDQEISEEEFRQMFEKFGEITS 257
Query: 278 I---RETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 315
R+ K R F+ + +A+AA+ +N ++ G+++
Sbjct: 258 ATLSRDQEGKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKL 299
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 163 SRTLFVRNINSNVEDSELRALFE---QYGDIRTLYTACKHR--GFVMISYYDIRAARTAM 217
S +L+V ++ +V ++ L LF Q IR A R G+ ++Y + A+
Sbjct: 47 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 106
Query: 218 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
L ++ + I +S + +P+ + QG + + NLD ++ N+ L F A+G +
Sbjct: 107 EDLNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILS 164
Query: 278 IR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 315
+ E + + + F+ + AA A+K +N + K++
Sbjct: 165 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 206
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 73/142 (51%), Gaps = 23/142 (16%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRALQ 221
++++N++ + + E R +FE++G+I + + K RGF ++Y +A+ A+ +
Sbjct: 231 VYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQEGKSRGFGFVNYSTHDSAQAAVDEMN 290
Query: 222 NKPLRRRKLDIHFSIPKDNPSDKDLN--------------QGT-LVVFNLDPSVSNEDLR 266
+K ++ +KL + + K + +++L QG L V NL + +E LR
Sbjct: 291 DKEVKGQKLYVGRA-QKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLR 349
Query: 267 QIFGAYGEV---KEIRETPHKR 285
++F YG + K +R+T +R
Sbjct: 350 EMFAPYGTITSAKVMRDTNIER 371
Score = 36.6 bits (83), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 250 TLVVFNLDPSVSNEDLRQIFGAYGEVKEIR-----ETPHKRHHKFIEFYDVRAAEAALKS 304
+L V LDPSV+ L ++F + G+V IR T + ++ + + E AL+
Sbjct: 49 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 108
Query: 305 LNRSDIAGKRIKL 317
LN + I GK ++
Sbjct: 109 LNYTLIKGKPCRI 121
>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 /
DSM 816 / NCTC 3887 / NRRL 1) GN=pab1 PE=3 SV=1
Length = 754
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 24/143 (16%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRALQ 221
++++NI+ +V + E R +FEQ+G+I + + K RGF ++Y +A+ A+ +
Sbjct: 234 IYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNYSTHESAQAAVDEMH 293
Query: 222 NKPLRRRKLDIHFSIPKDNPSDKDLN--------------QGT-LVVFNLDPSVSNEDLR 266
+K ++ +KL + + K + +++L QG L V NL V +E LR
Sbjct: 294 DKEVKTQKLYVGRA-QKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLR 352
Query: 267 QIFGAYGEV---KEIRE-TPHKR 285
++FG YG + K +R+ TP +R
Sbjct: 353 ELFGPYGTITSAKVMRDSTPAER 375
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 166 LFVRNINSNVEDSELRALFEQYGDIRTLYTACKH----RGFVMISYYDIRAARTAMRALQ 221
+F++N++S +++ L F +G+I + A +G+ + Y AA A++ +
Sbjct: 141 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 200
Query: 222 NKPLRRRKLDIHFSIPKDNPSDK----DLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
L +K+ + I K + K N + + N+DP V+ E+ R+IF +GE+
Sbjct: 201 GMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITS 260
Query: 278 I---RETPHK-RHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 315
R+ K R F+ + +A+AA+ ++ ++ +++
Sbjct: 261 ATLSRDPEGKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKL 302
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 163 SRTLFVRNINSNVEDSELRALFE---QYGDIRTLYTACKHR--GFVMISYYDIRAARTAM 217
S +L+V ++ +V ++ L LF Q IR A R G+ ++Y + A+
Sbjct: 50 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 109
Query: 218 RALQNKPLRRRKLDIHFSIPKDNPSDKDLNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 277
L ++ + I +S + +P+ + QG + + NLD ++ N+ L F A+G +
Sbjct: 110 EDLNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS 167
Query: 278 IR----ETPHKRHHKFIEFYDVRAAEAALKSLNRSDIAGKRI 315
+ E + + + F+ + AA A+K +N + K++
Sbjct: 168 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 209
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 249 GTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR-----ETPHKRHHKFIEFYDVRAAEAALK 303
+L V LDPSV+ L ++F + G+V IR T + ++ + + E AL+
Sbjct: 51 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 110
Query: 304 SLNRSDIAGKRIKL 317
LN + I GK ++
Sbjct: 111 DLNYTLIKGKPCRI 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 337,895,536
Number of Sequences: 539616
Number of extensions: 15839748
Number of successful extensions: 30347
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 639
Number of HSP's that attempted gapping in prelim test: 28873
Number of HSP's gapped (non-prelim): 1639
length of query: 829
length of database: 191,569,459
effective HSP length: 126
effective length of query: 703
effective length of database: 123,577,843
effective search space: 86875223629
effective search space used: 86875223629
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)