BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003349
(828 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255575800|ref|XP_002528799.1| ATP-dependent protease La, putative [Ricinus communis]
gi|223531802|gb|EEF33621.1| ATP-dependent protease La, putative [Ricinus communis]
Length = 890
Score = 1458 bits (3775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 735/818 (89%), Positives = 767/818 (93%), Gaps = 12/818 (1%)
Query: 17 GVGGDSSERASKVQVGASD------GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTY 70
GVG DS K+QV SD GK+QQEVI WHNRGVAARALHLSRGVEKPSGRVTY
Sbjct: 79 GVGNDSG----KIQVNNSDNNLKLDGKSQQEVIRWHNRGVAARALHLSRGVEKPSGRVTY 134
Query: 71 IVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELI 130
IVVLEGLCRFSVQELS RG YYTARISSLEMTK EMEQVEQDPDF++LSRQFKATAMELI
Sbjct: 135 IVVLEGLCRFSVQELSKRGMYYTARISSLEMTKAEMEQVEQDPDFVSLSRQFKATAMELI 194
Query: 131 SVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
SVLEQKQKT GRTKVLLETVPIHKLADIFVASFE+SFEEQL MLDS+DLK+RLSKATELV
Sbjct: 195 SVLEQKQKTDGRTKVLLETVPIHKLADIFVASFEMSFEEQLSMLDSIDLKIRLSKATELV 254
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
DRHLQSIRVAEKI+QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQS
Sbjct: 255 DRHLQSIRVAEKISQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQS 314
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
AGMPSNIWKH Q+ELRRLKKMQPQQPGY SSRVYLEL+ADLPW+K SEE DLDLKAAKER
Sbjct: 315 AGMPSNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELLADLPWQKDSEEHDLDLKAAKER 374
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LDSDHYGLV+VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA+ALGRKF+R
Sbjct: 375 LDSDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIATALGRKFVR 434
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA
Sbjct: 435 LSLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 494
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK
Sbjct: 495 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 554
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER + A A A
Sbjct: 555 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER--SLAALARAAA 612
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
V EQEQALP SK++HRL SPLL+NRLADGAEVEMEVIPM ++ HE+SN+FR+ S LVV
Sbjct: 613 VRLAEQEQALPLSKNMHRLASPLLENRLADGAEVEMEVIPMSDNNHELSNSFRVASALVV 672
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
DEAMLEKVLGPPRFDD+EAAERVA+PGISVGLVWT FGGEVQFVEATAM GKG+LHLTGQ
Sbjct: 673 DEAMLEKVLGPPRFDDKEAAERVASPGISVGLVWTAFGGEVQFVEATAMAGKGDLHLTGQ 732
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDVIKESAQIALTWVRARATDLQ A +NLL+GRDIHIHFPAGAVPKDGPSAGVTLV
Sbjct: 733 LGDVIKESAQIALTWVRARATDLQFAAAHEINLLEGRDIHIHFPAGAVPKDGPSAGVTLV 792
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG+KDKILAAHRYGIKRVILPERNLKDLV
Sbjct: 793 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPERNLKDLV 852
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
EVPAAVL SLEI+LAKRMEDVLEQAFEGGCPWR HSKL
Sbjct: 853 EVPAAVLGSLEILLAKRMEDVLEQAFEGGCPWRIHSKL 890
>gi|147834823|emb|CAN75012.1| hypothetical protein VITISV_034238 [Vitis vinifera]
Length = 904
Score = 1453 bits (3762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 733/822 (89%), Positives = 777/822 (94%), Gaps = 7/822 (0%)
Query: 12 FLKVSGVGGDSSERASKVQVGAS-----DGKNQQEVIHWHNRGVAARALHLSRGVEKPSG 66
F +GVG DS ER+SK+QV S DGKNQQEVIHWH RGVAARALHLSRGVEKPSG
Sbjct: 85 FYLSAGVGTDSGERSSKIQVATSESNKPDGKNQQEVIHWHTRGVAARALHLSRGVEKPSG 144
Query: 67 RVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATA 126
RVTYIVVLEGLCRFSVQELSTRGTYYTARISSL+M K EMEQVEQDP+FIALSRQFKATA
Sbjct: 145 RVTYIVVLEGLCRFSVQELSTRGTYYTARISSLDMNKTEMEQVEQDPEFIALSRQFKATA 204
Query: 127 MELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
MELISVLEQKQKTGGRTKVLLETVP+HKLADIFVASFEISFEEQL MLDSVDLKVRLSKA
Sbjct: 205 MELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDLKVRLSKA 264
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ ALER
Sbjct: 265 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALER 324
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
KMQSAGMP NIWKH Q+ELRRLKKMQPQQPGY SSRVYLEL+ADLPW+KASEE +LDL+A
Sbjct: 325 KMQSAGMPPNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELLADLPWQKASEEHELDLRA 384
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
AKERLDSDHYGLV+VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR
Sbjct: 385 AKERLDSDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 444
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
KF+RISLGGVKDEADIRGHRRTYIGSMPGRLI+GLKRVGV NPVMLLDEIDKTGSDVRGD
Sbjct: 445 KFVRISLGGVKDEADIRGHRRTYIGSMPGRLIEGLKRVGVSNPVMLLDEIDKTGSDVRGD 504
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
PASALLEVLDPEQNKTFNDHYLNVP+DLSKVIFVATANR QPIPPPLLDRMEVIELPGYT
Sbjct: 505 PASALLEVLDPEQNKTFNDHYLNVPYDLSKVIFVATANRVQPIPPPLLDRMEVIELPGYT 564
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
PEEKL+IAMRHLIPRVLDQHGL SEFL+I EAMVKLVIQRYTREAGVR+LERNLAALARA
Sbjct: 565 PEEKLKIAMRHLIPRVLDQHGLSSEFLEISEAMVKLVIQRYTREAGVRSLERNLAALARA 624
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS 606
AAV+VA EQEQ +P SKD+HRL SPLLD+RLADG+E+EMEVIPMG + E+SNTFR+ S
Sbjct: 625 AAVQVA--EQEQTIPLSKDMHRLASPLLDSRLADGSEMEMEVIPMGVNNQELSNTFRVAS 682
Query: 607 PLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELH 666
PLVVDEAML+KVLGPPR+DD+E AERVA G+SVGLVWT FGGEVQFVEATAM GKG+LH
Sbjct: 683 PLVVDEAMLDKVLGPPRYDDKETAERVATAGVSVGLVWTAFGGEVQFVEATAMLGKGDLH 742
Query: 667 LTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAG 726
LTGQLGDVIKESAQIALTWVRARA DL+L A + +NLLQGRD+HIHFPAGAVPKDGPSAG
Sbjct: 743 LTGQLGDVIKESAQIALTWVRARAADLKLAAAEEINLLQGRDVHIHFPAGAVPKDGPSAG 802
Query: 727 VTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNL 786
VT+VT+LVSLFS+KRVRADTAMTGEMTLRGL+LPVGG+KDKILAAHRYGIKRVILPERNL
Sbjct: 803 VTMVTSLVSLFSQKRVRADTAMTGEMTLRGLILPVGGIKDKILAAHRYGIKRVILPERNL 862
Query: 787 KDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
KDLVEVP+AVLASLEI+LAKRMEDVLEQAFEGGCPWR SKL
Sbjct: 863 KDLVEVPSAVLASLEILLAKRMEDVLEQAFEGGCPWRXDSKL 904
>gi|225427356|ref|XP_002282657.1| PREDICTED: lon protease homolog 2, peroxisomal [Vitis vinifera]
gi|297742183|emb|CBI33970.3| unnamed protein product [Vitis vinifera]
Length = 888
Score = 1452 bits (3758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 732/817 (89%), Positives = 776/817 (94%), Gaps = 7/817 (0%)
Query: 17 GVGGDSSERASKVQVGAS-----DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYI 71
GVG DS ER+SK+QV S DGKNQQEVIHWH RGVAARALHLSRGVEKPSGRVTYI
Sbjct: 74 GVGTDSGERSSKIQVATSESNKPDGKNQQEVIHWHTRGVAARALHLSRGVEKPSGRVTYI 133
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VVLEGLCRFSVQELSTRGTYYTARISSL+M K EMEQVEQDP+FIALSRQFKATAMELIS
Sbjct: 134 VVLEGLCRFSVQELSTRGTYYTARISSLDMNKTEMEQVEQDPEFIALSRQFKATAMELIS 193
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
VLEQKQKTGGRTKVLLETVP+HKLADIFVASFEISFEEQL MLDSVDLKVRLSKATELVD
Sbjct: 194 VLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDLKVRLSKATELVD 253
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQSA
Sbjct: 254 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQSA 313
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMP NIWKH Q+ELRRLKKMQPQQPGY SSRVYLEL+ADLPW+KASEE +LDL+AAKERL
Sbjct: 314 GMPPNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELLADLPWQKASEEHELDLRAAKERL 373
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
DSDHYGLV+VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF+RI
Sbjct: 374 DSDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFVRI 433
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGVKDEADIRGHRRTYIGSMPGRLI+GLKRVGV NPVMLLDEIDKTGSDVRGDPASAL
Sbjct: 434 SLGGVKDEADIRGHRRTYIGSMPGRLIEGLKRVGVSNPVMLLDEIDKTGSDVRGDPASAL 493
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQNKTFNDHYLNVP+DLSKVIFVATANR QPIPPPLLDRMEVIELPGYTPEEKL
Sbjct: 494 LEVLDPEQNKTFNDHYLNVPYDLSKVIFVATANRVQPIPPPLLDRMEVIELPGYTPEEKL 553
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
+IAMRHLIPRVLDQHGL SEFL+I EAMVKLVIQRYTREAGVR+LERNLAALARAAAV+V
Sbjct: 554 KIAMRHLIPRVLDQHGLSSEFLEISEAMVKLVIQRYTREAGVRSLERNLAALARAAAVQV 613
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
A EQEQ +P SKD+HRL SPLLD+RLADG+E+EMEVIPMG + E+SNTFR+ SPLVVD
Sbjct: 614 A--EQEQTIPLSKDMHRLASPLLDSRLADGSEMEMEVIPMGVNNQELSNTFRVASPLVVD 671
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
EAML+KVLGPPR+DD+E AERVA G+SVGLVWT FGGEVQFVEATAM GKG+LHLTGQL
Sbjct: 672 EAMLDKVLGPPRYDDKETAERVATAGVSVGLVWTAFGGEVQFVEATAMLGKGDLHLTGQL 731
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDVIKESAQIALTWVRARA DL+L A + +NLLQGRD+HIHFPAGAVPKDGPSAGVT+VT
Sbjct: 732 GDVIKESAQIALTWVRARAADLKLAAAEEINLLQGRDVHIHFPAGAVPKDGPSAGVTMVT 791
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
+LVSLFS+KRVRADTAMTGEMTLRGL+LPVGG+KDKILAAHRYGIKRVILPERNLKDLVE
Sbjct: 792 SLVSLFSQKRVRADTAMTGEMTLRGLILPVGGIKDKILAAHRYGIKRVILPERNLKDLVE 851
Query: 792 VPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
VP+AVLASLEI+LAKRMEDVLEQAFEGGCPWR+ SKL
Sbjct: 852 VPSAVLASLEILLAKRMEDVLEQAFEGGCPWRRDSKL 888
>gi|224126585|ref|XP_002329591.1| predicted protein [Populus trichocarpa]
gi|222870300|gb|EEF07431.1| predicted protein [Populus trichocarpa]
Length = 893
Score = 1447 bits (3746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 720/818 (88%), Positives = 762/818 (93%), Gaps = 8/818 (0%)
Query: 17 GVGGDSSERASKVQVGAS------DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTY 70
GVG DSSER+SK Q S DGK+QQEV HWHNRGVAARALHLSRGVEKPSGRVTY
Sbjct: 78 GVGSDSSERSSKTQASTSSDNVKLDGKHQQEVFHWHNRGVAARALHLSRGVEKPSGRVTY 137
Query: 71 IVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELI 130
IVVLEGLCRF++ EL TRGTYYTARIS LEMT E+EQV+QDPDFIALSRQFKATAMELI
Sbjct: 138 IVVLEGLCRFNLNELITRGTYYTARISPLEMTNAELEQVDQDPDFIALSRQFKATAMELI 197
Query: 131 SVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
SVLEQKQKTGGRTKVLLETVP+HKLADIFVASFEISFEEQL MLDSVDLKVRLSKATELV
Sbjct: 198 SVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDLKVRLSKATELV 257
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQS
Sbjct: 258 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQS 317
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
AGMPSNIWKH Q+ELRRLKKMQPQQPGY SSRVYLEL+ADLPW+ SEE +LDLKAAKER
Sbjct: 318 AGMPSNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELLADLPWQTVSEEHELDLKAAKER 377
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD+DHYGLV++KQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA+ALGRKF+R
Sbjct: 378 LDNDHYGLVKIKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVR 437
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
ISLGG+KDEADIRGHRRTYIGSMPGRLIDG+KRVGVCNPVMLLDEIDKTGSDVRGDPA+A
Sbjct: 438 ISLGGIKDEADIRGHRRTYIGSMPGRLIDGIKRVGVCNPVMLLDEIDKTGSDVRGDPAAA 497
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDPEQN TFNDHYLNVPFDLSKVIFV TANR QPIPPPLLDRMEVIELPGYTPEEK
Sbjct: 498 LLEVLDPEQNNTFNDHYLNVPFDLSKVIFVTTANRMQPIPPPLLDRMEVIELPGYTPEEK 557
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
LRIAM++LIPRVLDQHGL SEFLQIPE MVKLVIQRYTREAGVRNLERN A A A
Sbjct: 558 LRIAMQYLIPRVLDQHGLSSEFLQIPEGMVKLVIQRYTREAGVRNLERN--LAALARAAA 615
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
V EQEQA+P SKD+H+L SPLLDNRLA+GA++EMEVIPM E++HE+SNTF I SPLVV
Sbjct: 616 VRVAEQEQAVPLSKDMHQLASPLLDNRLAEGADLEMEVIPMNENSHEISNTFSIASPLVV 675
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
DE MLEKVLGPPRFDD+EAAERVA+PGISVGLVWT FGGEVQFVEATA GKGELHLTGQ
Sbjct: 676 DEPMLEKVLGPPRFDDKEAAERVASPGISVGLVWTAFGGEVQFVEATATAGKGELHLTGQ 735
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDVIKESAQIALTWVRA+ATDL+L A + N L+GRD+HIHFPAGAVPKDGPSAGVTLV
Sbjct: 736 LGDVIKESAQIALTWVRAKATDLKLAAANETNFLKGRDVHIHFPAGAVPKDGPSAGVTLV 795
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TALVSLFS+KRVRADTAMTGEMTLRGLVLPVGG+KDKILAAHRYGIKRVILPERNLKDLV
Sbjct: 796 TALVSLFSQKRVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPERNLKDLV 855
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
EVPAAVL SLEI+ AK+MEDVLEQAFEGGCPWRQHSKL
Sbjct: 856 EVPAAVLGSLEILPAKQMEDVLEQAFEGGCPWRQHSKL 893
>gi|224137996|ref|XP_002326492.1| predicted protein [Populus trichocarpa]
gi|222833814|gb|EEE72291.1| predicted protein [Populus trichocarpa]
Length = 893
Score = 1434 bits (3711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/816 (87%), Positives = 769/816 (94%), Gaps = 8/816 (0%)
Query: 19 GGDSSERASKVQVGAS------DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIV 72
G D+SE++S+ S DGK+QQEV HWHNRGVAARALHLSRGVEKPSGRVTYIV
Sbjct: 80 GSDTSEKSSRTPASTSSDNVKLDGKHQQEVFHWHNRGVAARALHLSRGVEKPSGRVTYIV 139
Query: 73 VLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISV 132
VLEGLCRF++ ELSTRG YYTARIS LEMTK E+EQV+QDPDF+ALSR FKATAMELISV
Sbjct: 140 VLEGLCRFNLHELSTRGAYYTARISPLEMTKAELEQVDQDPDFVALSRHFKATAMELISV 199
Query: 133 LEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDR 192
LEQKQKTGGRTKVLLETVP+HKLADIFVASFEISFEEQL MLDSVDLK RLSKA ELVD+
Sbjct: 200 LEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDLKARLSKANELVDQ 259
Query: 193 HLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAG 252
HLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ A+ERKMQSAG
Sbjct: 260 HLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAAIERKMQSAG 319
Query: 253 MPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLD 312
MPSNIWKH Q+ELRRLKKMQPQQPGY SS VYLEL+ADLPW+ SE+++LDLKAAK+RLD
Sbjct: 320 MPSNIWKHAQRELRRLKKMQPQQPGYNSSHVYLELLADLPWQTGSEQLELDLKAAKKRLD 379
Query: 313 SDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRIS 372
+DHYGLV++KQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA+ALGRKF+RIS
Sbjct: 380 NDHYGLVKIKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRIS 439
Query: 373 LGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALL 432
LGG+KDEADIRGHRRTYIGSMPGRLIDG+KRVGVCNPVMLLDEIDKTGSDVRGDPASALL
Sbjct: 440 LGGIKDEADIRGHRRTYIGSMPGRLIDGIKRVGVCNPVMLLDEIDKTGSDVRGDPASALL 499
Query: 433 EVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLR 492
EVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN+ QPIPPPLLDRMEVIELPGYTPEEKLR
Sbjct: 500 EVLDPEQNKTFNDHYLNVPFDLSKVIFVATANKLQPIPPPLLDRMEVIELPGYTPEEKLR 559
Query: 493 IAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVA 552
IAM++LIPRVLDQHGL SEFLQIPEAMV+LVIQRYTREAGVRNLERNLAALARAAAV+VA
Sbjct: 560 IAMQYLIPRVLDQHGLSSEFLQIPEAMVELVIQRYTREAGVRNLERNLAALARAAAVRVA 619
Query: 553 EQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDE 612
EQEQ +P SKD+H+L SPLL+NRL++GAEVEMEVIPM E+ HE+SNTF I SPLVVDE
Sbjct: 620 --EQEQTVPLSKDMHQLASPLLENRLSEGAEVEMEVIPMNENNHEISNTFSIASPLVVDE 677
Query: 613 AMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLG 672
MLEKVLGPPRFDDREAAERVAAPGISVGLVWT FGGEVQFVEA++M GKGELHLTGQLG
Sbjct: 678 PMLEKVLGPPRFDDREAAERVAAPGISVGLVWTAFGGEVQFVEASSMVGKGELHLTGQLG 737
Query: 673 DVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTA 732
DVIKESAQIALTWVRARATDL+L A D NLL+ RD+HIHFPAGAVPKDGPSAGVTLVTA
Sbjct: 738 DVIKESAQIALTWVRARATDLKLAAADETNLLEDRDVHIHFPAGAVPKDGPSAGVTLVTA 797
Query: 733 LVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEV 792
LVSLFS+KRVRADTAMTGEMTLRGLVLPVGG+KDKILAAHRYGIKRVILPE+N+KDLVEV
Sbjct: 798 LVSLFSQKRVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPEKNMKDLVEV 857
Query: 793 PAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
PAAVL SLEI+LAKRMEDVLEQAFEGGCPW+QHSKL
Sbjct: 858 PAAVLGSLEILLAKRMEDVLEQAFEGGCPWKQHSKL 893
>gi|357482271|ref|XP_003611421.1| Lon protease-like protein [Medicago truncatula]
gi|355512756|gb|AES94379.1| Lon protease-like protein [Medicago truncatula]
Length = 883
Score = 1416 bits (3665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/810 (85%), Positives = 750/810 (92%), Gaps = 4/810 (0%)
Query: 21 DSSERASKVQVGASD--GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLC 78
DS ++ SKV G+SD K Q +V+HWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLC
Sbjct: 76 DSIDQTSKVHGGSSDSNAKVQNDVVHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLC 135
Query: 79 RFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQK 138
RF+VQEL+TRGTY+TARISSLEMTK EMEQVE DPDFI LSRQFKATAMELISVLEQKQ
Sbjct: 136 RFNVQELNTRGTYHTARISSLEMTKTEMEQVEHDPDFIMLSRQFKATAMELISVLEQKQS 195
Query: 139 TGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIR 198
TGGRTKVLLETVP+HKLADIFVASFEISFEEQL MLDSVD KVRLSKATELVDRHLQSIR
Sbjct: 196 TGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAKVRLSKATELVDRHLQSIR 255
Query: 199 VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIW 258
VAEKITQKVEGQLSKSQKEFLLRQQM+AIKEELGDNDD+EDDL ALERKMQSAGMP N+W
Sbjct: 256 VAEKITQKVEGQLSKSQKEFLLRQQMKAIKEELGDNDDEEDDLAALERKMQSAGMPQNVW 315
Query: 259 KHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGL 318
K +ELRRLKKMQPQQPGY+SSR YLEL+ADLPW+KAS+E++LDL+AA+ERLD+DHYGL
Sbjct: 316 KLSLRELRRLKKMQPQQPGYSSSRAYLELLADLPWQKASKELELDLRAAQERLDNDHYGL 375
Query: 319 VRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKD 378
+VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA+AL RKF+RISLGGVKD
Sbjct: 376 EKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKD 435
Query: 379 EADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPE 438
EADIRGHRRTYIGSMPGRLIDGLK+V VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPE
Sbjct: 436 EADIRGHRRTYIGSMPGRLIDGLKKVAVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPE 495
Query: 439 QNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHL 498
QNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL+IAM+HL
Sbjct: 496 QNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLKIAMKHL 555
Query: 499 IPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQ 558
IPRVLDQHGL SEFLQIP+AMV+LVIQRYTREAGVR+LER + A A A V EQEQ
Sbjct: 556 IPRVLDQHGLSSEFLQIPKAMVQLVIQRYTREAGVRSLER--SLAALARAAAVRVAEQEQ 613
Query: 559 ALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKV 618
+P SK V L +PLL+NRL D AEVEMEVIPMG + ++SNTFRITSPLVVDEAM+EKV
Sbjct: 614 VVPLSKGVEGLTTPLLENRLVDSAEVEMEVIPMGVNNRDISNTFRITSPLVVDEAMVEKV 673
Query: 619 LGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKES 678
LGPP+FD RE AERV PGISVGLVWT+ GGEVQFVEA+ M GKGELHLTGQLGDVIKES
Sbjct: 674 LGPPKFDGRETAERVVTPGISVGLVWTSVGGEVQFVEASTMVGKGELHLTGQLGDVIKES 733
Query: 679 AQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFS 738
AQIALTWVRARATDL+L A + ++LL+GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFS
Sbjct: 734 AQIALTWVRARATDLKLAAAESISLLEGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFS 793
Query: 739 RKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLA 798
+++VR+DTAMTGEMTLRGLVLPVGG+KDKILAAHRYGIKRVILPERNLKDLVEVP +VLA
Sbjct: 794 QRKVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPERNLKDLVEVPPSVLA 853
Query: 799 SLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
+LEI+LAKRMEDVLE AF+ GCPWRQHSKL
Sbjct: 854 NLEILLAKRMEDVLEHAFDSGCPWRQHSKL 883
>gi|356497070|ref|XP_003517387.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Glycine max]
Length = 889
Score = 1403 bits (3631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/817 (88%), Positives = 767/817 (93%), Gaps = 7/817 (0%)
Query: 17 GVGGDSSERASKVQVGASDG-----KNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYI 71
G G DS ++ SKVQ G+SD KNQ +V+HWHNRGVAARALHLSRGVEKPSGRVTYI
Sbjct: 75 GKGTDSLDQNSKVQGGSSDSQKLDVKNQHDVVHWHNRGVAARALHLSRGVEKPSGRVTYI 134
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VVLEGLCRFSVQELSTRGTY+TARISSLEMTK EMEQVEQDPDFI LSRQFKATAMELIS
Sbjct: 135 VVLEGLCRFSVQELSTRGTYHTARISSLEMTKTEMEQVEQDPDFITLSRQFKATAMELIS 194
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
VLEQKQKTGGRTKVLLETVP+HKLADIFVASFEISFEEQL MLDSVD KVRLSKATELVD
Sbjct: 195 VLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDPKVRLSKATELVD 254
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
RHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDL ALERKMQ A
Sbjct: 255 RHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLAALERKMQKA 314
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMP NIWKH KELRRLKKMQPQQPGY SSR YL+L+ADLPW+KAS+E++LDL+AA+ERL
Sbjct: 315 GMPQNIWKHAHKELRRLKKMQPQQPGYNSSRAYLDLLADLPWQKASKELELDLRAAQERL 374
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D+DHYGLV+VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA+ALGRKF+RI
Sbjct: 375 DTDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRI 434
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV VCNPVML+DEIDKTGSDVRGDPASAL
Sbjct: 435 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVAVCNPVMLIDEIDKTGSDVRGDPASAL 494
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQNK FNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT EEKL
Sbjct: 495 LEVLDPEQNKAFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTAEEKL 554
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
+IAM+HLIPRVL+QHGL SEFLQIPE MV+LVIQRYTREAGVRNLERNLAALARAAAV+V
Sbjct: 555 KIAMQHLIPRVLEQHGLSSEFLQIPEGMVQLVIQRYTREAGVRNLERNLAALARAAAVRV 614
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
A EQEQ +P +K V L +PLL+NRL+DGAEVEMEVIPMG + ++SNTFRITSPLVVD
Sbjct: 615 A--EQEQVVPLNKGVEGLSTPLLENRLSDGAEVEMEVIPMGVNNRDISNTFRITSPLVVD 672
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
EAMLEKVLGPP+FD REA +RVA PG SVGLVWT FGGEVQFVEATAM GKGELHLTGQL
Sbjct: 673 EAMLEKVLGPPKFDGREAEDRVATPGASVGLVWTTFGGEVQFVEATAMVGKGELHLTGQL 732
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDVIKESAQIALTWVRARAT+L+L A +G+NLL+GRDIHIHFPAGAVPKDGPSAGVTLVT
Sbjct: 733 GDVIKESAQIALTWVRARATELRLAAAEGINLLEGRDIHIHFPAGAVPKDGPSAGVTLVT 792
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
ALVSLFS++RVR+DTAMTGEMTLRGLVLPVGG+KDKILAAHR GIKRVILPERNLKDLVE
Sbjct: 793 ALVSLFSQRRVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRCGIKRVILPERNLKDLVE 852
Query: 792 VPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
VP++VLA LEI+LAKRMEDVLEQAF+GGCPWRQHSKL
Sbjct: 853 VPSSVLADLEILLAKRMEDVLEQAFDGGCPWRQHSKL 889
>gi|449511525|ref|XP_004163979.1| PREDICTED: lon protease homolog 2, peroxisomal-like, partial
[Cucumis sativus]
Length = 816
Score = 1402 bits (3630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 716/817 (87%), Positives = 762/817 (93%), Gaps = 9/817 (1%)
Query: 17 GVGGDSSERASKVQVGASD-----GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYI 71
GVG DS +R+S+VQ G SD GKN QEVI WH+RGVAARAL LSRGVEKPSGRVTY
Sbjct: 4 GVGSDSGDRSSRVQSGTSDSQRVDGKNHQEVIQWHSRGVAARALQLSRGVEKPSGRVTYT 63
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VVLEGLCRF+VQELSTRGTYYTARIS EMTK EMEQVEQDPDFI+LSRQFKATAMELIS
Sbjct: 64 VVLEGLCRFTVQELSTRGTYYTARISPSEMTKAEMEQVEQDPDFISLSRQFKATAMELIS 123
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
VLEQKQKTGGRTKVLLETVP+HKLADIFVASFE+SFEEQL MLDSVDL+VRLSKA ELVD
Sbjct: 124 VLEQKQKTGGRTKVLLETVPVHKLADIFVASFEMSFEEQLSMLDSVDLRVRLSKAMELVD 183
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL +DDDEDDLVALERKMQSA
Sbjct: 184 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL-GDDDDEDDLVALERKMQSA 242
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
MP+NIWKH Q+ELR LKKMQPQQPGY S RVYLEL+ADLPW+KA+EE +LDLKAAKERL
Sbjct: 243 EMPANIWKHAQRELRSLKKMQPQQPGYNSLRVYLELLADLPWKKATEENELDLKAAKERL 302
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
DSDHYGLV+VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA+ALGRKF+RI
Sbjct: 303 DSDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRI 362
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV VCNPVMLLDEIDKTGSDVRGDPASAL
Sbjct: 363 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVCNPVMLLDEIDKTGSDVRGDPASAL 422
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQNK F+DHYLNVPFDLSKV+FVATANR QPIPPPLLDRMEVIELPGYTPEEKL
Sbjct: 423 LEVLDPEQNKKFSDHYLNVPFDLSKVVFVATANRMQPIPPPLLDRMEVIELPGYTPEEKL 482
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
+IAM HLIPRVL+QHGL +EFLQIPEAMVKLV+QRYTREAGVRNLERNLAALARAAAV+V
Sbjct: 483 KIAMHHLIPRVLEQHGLSAEFLQIPEAMVKLVVQRYTREAGVRNLERNLAALARAAAVRV 542
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
E++Q +P +KDVH++ SPLL+NRL+DGAEV+MEVIP+G + HE+ N RI SPLVVD
Sbjct: 543 V--ERDQTVPLNKDVHQVSSPLLENRLSDGAEVDMEVIPIG-ADHEIPNQLRIASPLVVD 599
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
EAMLEKVLGPPRFDDREAAERV +PGISVGLVWT GGEVQFVEATAM GKGELHLTGQL
Sbjct: 600 EAMLEKVLGPPRFDDREAAERVISPGISVGLVWTAVGGEVQFVEATAMSGKGELHLTGQL 659
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDVIKESAQIALTWVRARATDL+L + NLL+GRDIHIHFPAGAVPKDGPSAGVTLVT
Sbjct: 660 GDVIKESAQIALTWVRARATDLKLASACESNLLEGRDIHIHFPAGAVPKDGPSAGVTLVT 719
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
ALVSLF +KRVRADTAMTGEMTLRGLVLPVGG+KDKILAAHRYGIKRVILPERNLKDLVE
Sbjct: 720 ALVSLFGQKRVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPERNLKDLVE 779
Query: 792 VPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
VP+ VLASLEI+LAKRMEDVLEQAFEGGCPWR HSKL
Sbjct: 780 VPSGVLASLEILLAKRMEDVLEQAFEGGCPWRLHSKL 816
>gi|449464900|ref|XP_004150167.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Cucumis
sativus]
Length = 886
Score = 1401 bits (3626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 718/827 (86%), Positives = 764/827 (92%), Gaps = 11/827 (1%)
Query: 9 APLFLKV--SGVGGDSSERASKVQVGASD-----GKNQQEVIHWHNRGVAARALHLSRGV 61
AP + V GVG DS +R+S+VQ G SD GKN QEVI WH+RGVAARAL LSRGV
Sbjct: 64 APAIVPVLSQGVGSDSGDRSSRVQSGTSDSQRVDGKNHQEVIQWHSRGVAARALQLSRGV 123
Query: 62 EKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQ 121
EKPSGRVTY VVLEGLCRF+VQELSTRGTYYTARIS EMTK EMEQVEQDPDFI+LSRQ
Sbjct: 124 EKPSGRVTYTVVLEGLCRFTVQELSTRGTYYTARISPSEMTKAEMEQVEQDPDFISLSRQ 183
Query: 122 FKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKV 181
FKATAMELISVLEQKQKTGGRTKVLLETVP+HKLADIFVASFE+SFEEQL MLDSVDL+V
Sbjct: 184 FKATAMELISVLEQKQKTGGRTKVLLETVPVHKLADIFVASFEMSFEEQLSMLDSVDLRV 243
Query: 182 RLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDL 241
RLSKA ELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL +DDDEDDL
Sbjct: 244 RLSKAMELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL-GDDDDEDDL 302
Query: 242 VALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEID 301
VALERKMQSA MP+NIWKH Q+ELR LKKMQPQQPGY S RVYLEL+ADLPW+KA+EE +
Sbjct: 303 VALERKMQSAEMPANIWKHAQRELRSLKKMQPQQPGYNSLRVYLELLADLPWKKATEENE 362
Query: 302 LDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA 361
LDLKAAKERLDSDHYGLV+VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA
Sbjct: 363 LDLKAAKERLDSDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA 422
Query: 362 SALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGS 421
+ALGRKF+RISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV VCNPVMLLDEIDKTGS
Sbjct: 423 AALGRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVCNPVMLLDEIDKTGS 482
Query: 422 DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIE 481
DVRGDPASALLEVLDPEQNK F+DHYLNVPFDLSKV+FVATANR QPIPPPLLDRMEVIE
Sbjct: 483 DVRGDPASALLEVLDPEQNKKFSDHYLNVPFDLSKVVFVATANRMQPIPPPLLDRMEVIE 542
Query: 482 LPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLA 541
LPGYTPEEKL+IAM HLIPRVL+QHGL +EFLQIPEAMVKLV+QRYTREAGVRNLERNLA
Sbjct: 543 LPGYTPEEKLKIAMHHLIPRVLEQHGLSAEFLQIPEAMVKLVVQRYTREAGVRNLERNLA 602
Query: 542 ALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNT 601
ALARAAA V E++Q +P +KDVH++ SPLL+NRL+DGAEV+MEVIP+G + HE+ N
Sbjct: 603 ALARAAA--VRVVERDQTVPLNKDVHQVSSPLLENRLSDGAEVDMEVIPIG-ADHEIPNQ 659
Query: 602 FRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRG 661
RI SPLVVDEAMLEKVLGPPRFDDREAAERV +PGISVGLVWT GGEVQFVEATAM G
Sbjct: 660 LRIASPLVVDEAMLEKVLGPPRFDDREAAERVISPGISVGLVWTAVGGEVQFVEATAMSG 719
Query: 662 KGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKD 721
KGELHLTGQLGDVIKESAQIALTWVRARATDL+L + NLL+GRDIHIHFPAGAVPKD
Sbjct: 720 KGELHLTGQLGDVIKESAQIALTWVRARATDLKLASACESNLLEGRDIHIHFPAGAVPKD 779
Query: 722 GPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVIL 781
GPSAGVTLVTALVSLF +KRVRADTAMTGEMTLRGLVLPVGG+KDKILAAHRYGIKRVIL
Sbjct: 780 GPSAGVTLVTALVSLFGQKRVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVIL 839
Query: 782 PERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
PERNLKDLVEVP+ VLASLEI+LAKRMEDVLEQAFEGGCPWR HSKL
Sbjct: 840 PERNLKDLVEVPSGVLASLEILLAKRMEDVLEQAFEGGCPWRLHSKL 886
>gi|356563427|ref|XP_003549964.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Glycine max]
Length = 886
Score = 1390 bits (3597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 704/815 (86%), Positives = 760/815 (93%), Gaps = 7/815 (0%)
Query: 19 GGDSSERASKVQVGASDG-----KNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVV 73
G DS+ + SKVQ G+ D K Q +V+HWHNRGVAAR LHLSRGVEKPSGRVTY VV
Sbjct: 74 GADSTNQNSKVQGGSLDSRKLDTKKQNDVVHWHNRGVAARPLHLSRGVEKPSGRVTYTVV 133
Query: 74 LEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVL 133
LEGLCRFSVQELSTRG Y+TARI+SLEMTK E+EQVEQDPDFI LSRQFKATAMELIS+L
Sbjct: 134 LEGLCRFSVQELSTRGIYHTARITSLEMTKTELEQVEQDPDFIMLSRQFKATAMELISIL 193
Query: 134 EQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRH 193
E KQKTGGRTKVLL+ VP+HKLADIFVASFEISFEEQL MLDSVD KVRLSKATELVDRH
Sbjct: 194 ELKQKTGGRTKVLLDNVPVHKLADIFVASFEISFEEQLSMLDSVDPKVRLSKATELVDRH 253
Query: 194 LQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGM 253
LQSIRVAEKITQKVEGQLSKSQKEFLLRQQ+RAIKEELGDNDDDEDDL ALERKMQSAGM
Sbjct: 254 LQSIRVAEKITQKVEGQLSKSQKEFLLRQQIRAIKEELGDNDDDEDDLAALERKMQSAGM 313
Query: 254 PSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDS 313
P NIWKH +ELRRLKKMQPQQPGY SSRVYLELI+DLPW+KASEEI+LDL+AA++RLDS
Sbjct: 314 PQNIWKHAHRELRRLKKMQPQQPGYNSSRVYLELISDLPWQKASEEIELDLRAAQKRLDS 373
Query: 314 DHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISL 373
DHYGLV+VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA+ALGRKF+RISL
Sbjct: 374 DHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRISL 433
Query: 374 GGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLE 433
GGVKDEADIRGHRRTY+GSMPGRLIDGLKRV VCNPVMLLDE+DKTGSD+RGDPASALLE
Sbjct: 434 GGVKDEADIRGHRRTYVGSMPGRLIDGLKRVAVCNPVMLLDEVDKTGSDIRGDPASALLE 493
Query: 434 VLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRI 493
VLDPEQNK+FNDHYLNVPFDLSKV+FVATANR QPIPPPL DRME+IELPGYTPEEKL I
Sbjct: 494 VLDPEQNKSFNDHYLNVPFDLSKVVFVATANRLQPIPPPLRDRMEIIELPGYTPEEKLHI 553
Query: 494 AMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE 553
AMRHLIPRVLDQHGL SEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAV V
Sbjct: 554 AMRHLIPRVLDQHGLSSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVIVL- 612
Query: 554 QEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEA 613
EQEQ +P +K + L +PL++NRLADG EVEMEVIPMG ++ ++S+TFRI SPLVVDE
Sbjct: 613 -EQEQVVPLNKGMQGLATPLVENRLADGTEVEMEVIPMGVNSRDISSTFRIASPLVVDET 671
Query: 614 MLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGD 673
MLEKVLGPPRFD REAAERVA PG+SVGLVWT FGGEVQFVEATAM GKGELHLTGQLGD
Sbjct: 672 MLEKVLGPPRFDGREAAERVATPGVSVGLVWTAFGGEVQFVEATAMVGKGELHLTGQLGD 731
Query: 674 VIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTAL 733
VIKESAQIALTWVRARATDL+L A +G N+L+GRD+HIHFPAGAVPKDGPSAGVTLVTAL
Sbjct: 732 VIKESAQIALTWVRARATDLRLAATEGFNILEGRDVHIHFPAGAVPKDGPSAGVTLVTAL 791
Query: 734 VSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVP 793
VSLFS++RVR+DTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVP
Sbjct: 792 VSLFSQQRVRSDTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVP 851
Query: 794 AAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
++VL++LE++LAKR+EDVLE AF+GGCPWRQHSKL
Sbjct: 852 SSVLSNLEVLLAKRVEDVLEHAFDGGCPWRQHSKL 886
>gi|313104128|sp|O04979.2|LONP2_SPIOL RecName: Full=Lon protease homolog 2, peroxisomal
Length = 887
Score = 1385 bits (3585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/817 (83%), Positives = 748/817 (91%), Gaps = 8/817 (0%)
Query: 17 GVGGDSSERASKVQVGASD-----GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYI 71
G G DS ER K Q G SD GK+QQE +HWH RGVAARALHLSRGVEKPSGRVTY
Sbjct: 74 GGGTDSGERNVKSQPGLSDSRKADGKSQQEAVHWHTRGVAARALHLSRGVEKPSGRVTYT 133
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VVLEGLCRF V EL++RG YYTARIS L++TK +MEQ +QDPDF++L+RQFK TA+ELIS
Sbjct: 134 VVLEGLCRFRVMELNSRGNYYTARISPLDITKADMEQAQQDPDFVSLARQFKVTAVELIS 193
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
VLEQKQKTGGRTKVLLETVP+HKLADIFVASFEISFEEQL MLDS+DLKVRLSKATELVD
Sbjct: 194 VLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLCMLDSIDLKVRLSKATELVD 253
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
RHLQSIRVAEKITQKVEGQLSKSQ+EFLLRQQMRAIKEELGDNDDDEDD+ LERKMQSA
Sbjct: 254 RHLQSIRVAEKITQKVEGQLSKSQREFLLRQQMRAIKEELGDNDDDEDDVAVLERKMQSA 313
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMP+NIWKH Q+ELRRLKKMQPQQPGY+SSRVYLEL+ADLPW+ A+EE LDL+AAKERL
Sbjct: 314 GMPANIWKHAQRELRRLKKMQPQQPGYSSSRVYLELLADLPWQNATEEQKLDLRAAKERL 373
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
DSDHYGLV+VKQRIIEYLAVRKLKPDARGP+LCFVGPPGVGKTSLA+SI++ALGRKFIRI
Sbjct: 374 DSDHYGLVKVKQRIIEYLAVRKLKPDARGPILCFVGPPGVGKTSLAASISAALGRKFIRI 433
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGVKDEADIRGHRRTYIGSMPGRLIDG+KRVGV NPVMLLDEIDKTGSDVRGDPASAL
Sbjct: 434 SLGGVKDEADIRGHRRTYIGSMPGRLIDGIKRVGVSNPVMLLDEIDKTGSDVRGDPASAL 493
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQNKTFNDHYLNVP+DLSKVIFVATAN+ QPIPPPLLDRMEVIELPGYTPEEK
Sbjct: 494 LEVLDPEQNKTFNDHYLNVPYDLSKVIFVATANKVQPIPPPLLDRMEVIELPGYTPEEKA 553
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
RIAM++LIPRV+DQHGL SEFLQI E MVKL+IQRYTREAGVRNLERNL+ALARAAAVKV
Sbjct: 554 RIAMQYLIPRVMDQHGLSSEFLQISEDMVKLIIQRYTREAGVRNLERNLSALARAAAVKV 613
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
AEQ+ A+ SKD H+ SP+ ++RLA+GAEVEMEVIPMG E+SN ++ SPL+VD
Sbjct: 614 AEQDNATAV--SKDFHQFTSPVEESRLAEGAEVEMEVIPMGVDNREISNALQVMSPLIVD 671
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
E MLE VLGPPR+DDRE AERV+ PG+SVGLVWT FGGEVQFVEA+ M GKGEL LTGQL
Sbjct: 672 ETMLENVLGPPRYDDRETAERVSNPGVSVGLVWTAFGGEVQFVEASVMAGKGELRLTGQL 731
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDVIKESAQIALTWVRARA +L LVA +NL++GRDIHIHFPAGAVPKDGPSAGVTLVT
Sbjct: 732 GDVIKESAQIALTWVRARAMELNLVATGEINLMEGRDIHIHFPAGAVPKDGPSAGVTLVT 791
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
ALVSL S+KR+RADTAMTGEMTLRGLVLPVGGVKDK+LAAHRYGIKRVILPERNLKDLVE
Sbjct: 792 ALVSLLSQKRMRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLVE 851
Query: 792 VPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
VP+AVL++LEII AKRME VLEQAFEGGCPWRQ ++L
Sbjct: 852 VPSAVLSNLEIIYAKRME-VLEQAFEGGCPWRQRARL 887
>gi|356511236|ref|XP_003524333.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Glycine max]
Length = 885
Score = 1382 bits (3577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/814 (86%), Positives = 755/814 (92%), Gaps = 6/814 (0%)
Query: 19 GGDSSERASKVQVGASDGKN----QQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVL 74
G DS+ + SKVQ G+SD +Q +HWHNRGVAAR LHLSRGVEKPSGRVTY VVL
Sbjct: 74 GADSTNQNSKVQSGSSDSHKLDTKKQNDVHWHNRGVAARPLHLSRGVEKPSGRVTYTVVL 133
Query: 75 EGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLE 134
EGLCRFSVQELS RG Y+TARI+SLEMTK E+EQVEQDPDFI LSRQFKATAMELISVLE
Sbjct: 134 EGLCRFSVQELSMRGIYHTARITSLEMTKTELEQVEQDPDFIMLSRQFKATAMELISVLE 193
Query: 135 QKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHL 194
KQKTGGRTKVLL+ VP+HKLADIFVASFEISFEEQL MLD +D KVRLSKATELVDRHL
Sbjct: 194 LKQKTGGRTKVLLDNVPVHKLADIFVASFEISFEEQLSMLDLIDPKVRLSKATELVDRHL 253
Query: 195 QSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMP 254
QSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDL ALERKMQSAGMP
Sbjct: 254 QSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLAALERKMQSAGMP 313
Query: 255 SNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSD 314
NIWKH +ELRRLKKMQPQQPGY SSRVYLEL+ADLPW+KASEEIDLDL+AA++RLDSD
Sbjct: 314 QNIWKHGHRELRRLKKMQPQQPGYNSSRVYLELLADLPWQKASEEIDLDLRAARKRLDSD 373
Query: 315 HYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLG 374
HYGLV+VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA+ALGRKF+RISLG
Sbjct: 374 HYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRISLG 433
Query: 375 GVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEV 434
GVKDEADIRGHRRTY+GSMPGRLIDGLKRV VCNPVMLLDE+DKTGSD+RGDPASALLEV
Sbjct: 434 GVKDEADIRGHRRTYVGSMPGRLIDGLKRVAVCNPVMLLDEVDKTGSDIRGDPASALLEV 493
Query: 435 LDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIA 494
LDPEQNK+FNDHYLNVPFDLSKV+FVATANR QPIPPPL DRMEVIELPGYTPEEKL+IA
Sbjct: 494 LDPEQNKSFNDHYLNVPFDLSKVVFVATANRLQPIPPPLRDRMEVIELPGYTPEEKLQIA 553
Query: 495 MRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQ 554
MRHLIPRVLDQHGL SEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA V
Sbjct: 554 MRHLIPRVLDQHGLSSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA--VRVL 611
Query: 555 EQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAM 614
EQEQ +P +K + L +PL++NRLADG EVEMEVIPMG ++ ++SNTFRI SP VVDE M
Sbjct: 612 EQEQVVPLNKGMQGLATPLVENRLADGTEVEMEVIPMGVNSRDISNTFRIASPFVVDETM 671
Query: 615 LEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDV 674
LEKVLGPPRFD REAAERVA PG++VGLVWT FGGEVQFVEATAM GKGELHLTGQLGDV
Sbjct: 672 LEKVLGPPRFDGREAAERVATPGVTVGLVWTAFGGEVQFVEATAMVGKGELHLTGQLGDV 731
Query: 675 IKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALV 734
IKESAQIALTWVRAR TDL+L A +G N+L+GRD+HIHFPAGAVPKDGPSAGVTLVTALV
Sbjct: 732 IKESAQIALTWVRARTTDLRLGATEGFNILEGRDVHIHFPAGAVPKDGPSAGVTLVTALV 791
Query: 735 SLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPA 794
SLFS++RVR+DTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVP+
Sbjct: 792 SLFSQQRVRSDTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPS 851
Query: 795 AVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
+VL++LEI+LAKR+EDVLE AF+GGCPWRQHSKL
Sbjct: 852 SVLSNLEILLAKRVEDVLEHAFDGGCPWRQHSKL 885
>gi|297790979|ref|XP_002863374.1| hypothetical protein ARALYDRAFT_494276 [Arabidopsis lyrata subsp.
lyrata]
gi|297309209|gb|EFH39633.1| hypothetical protein ARALYDRAFT_494276 [Arabidopsis lyrata subsp.
lyrata]
Length = 888
Score = 1379 bits (3568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 699/818 (85%), Positives = 751/818 (91%), Gaps = 9/818 (1%)
Query: 17 GVGGDSSERASKVQVGA-----SDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYI 71
G G DS ER+ K VG SD K+QQ+ + WH RGVAARALHLSRGVEKPSGRVTY+
Sbjct: 74 GAGSDSGERSLKFLVGTTDAQKSDAKDQQD-LQWHTRGVAARALHLSRGVEKPSGRVTYV 132
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VVLEGL RF+VQEL RG Y ARI+SLEMTK E+EQV+QDPDF+ALSRQFK TAMEL+S
Sbjct: 133 VVLEGLSRFNVQELGKRGPYSVARITSLEMTKAELEQVQQDPDFVALSRQFKTTAMELVS 192
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
VLEQKQKTGGRTKVLLETVPIHKLADIFVASFE+SFEEQL MLDSVDLKVRLSKATELVD
Sbjct: 193 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEMSFEEQLSMLDSVDLKVRLSKATELVD 252
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
RHLQSIRVAEKITQKVEGQLSKSQKE+LLRQQMRAIKEELGDNDDDEDD+ ALERKMQ+A
Sbjct: 253 RHLQSIRVAEKITQKVEGQLSKSQKEYLLRQQMRAIKEELGDNDDDEDDVAALERKMQAA 312
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMPSNIWKH Q+ELRRLKKMQPQQPGY SSRVYLEL+ADLPWEKASEE +LDLKAAKERL
Sbjct: 313 GMPSNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELLADLPWEKASEEHELDLKAAKERL 372
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
DSDHYGL +VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA+ALGRKF+R+
Sbjct: 373 DSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRL 432
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL
Sbjct: 433 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 492
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQNK+FNDHYLNVP+DLSKV+FVATANR QPIPPPLLDRME+IELPGYT EEKL
Sbjct: 493 LEVLDPEQNKSFNDHYLNVPYDLSKVVFVATANRVQPIPPPLLDRMELIELPGYTQEEKL 552
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
+IAMRHLIPRVLDQHGL SEFL+IPEAMVK +IQRYTREAGVR+LERNLAALARAAAV V
Sbjct: 553 KIAMRHLIPRVLDQHGLSSEFLKIPEAMVKNIIQRYTREAGVRSLERNLAALARAAAVMV 612
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
A E EQ LP SKDV +L SPLL+ R+A+G EVEMEVIPMG + HE+ TF+ S LVVD
Sbjct: 613 A--EHEQTLPLSKDVQKLTSPLLNGRMAEGGEVEMEVIPMGVNDHEIGGTFQSPSALVVD 670
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
E MLEK+LGPPRFDD EAA+RVA+ G+SVGLVWT FGGEVQFVEAT+M GKGE+HLTGQL
Sbjct: 671 ETMLEKILGPPRFDDSEAADRVASAGVSVGLVWTTFGGEVQFVEATSMVGKGEMHLTGQL 730
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDVIKESAQ+ALTWVRARA+D +L MN+L GRDIHIHFPAGAVPKDGPSAGVTLVT
Sbjct: 731 GDVIKESAQLALTWVRARASDFKLALAGDMNVLDGRDIHIHFPAGAVPKDGPSAGVTLVT 790
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
ALVSLFS+KRVRADTAMTGEMTLRGLVLPVGG+KDKILAAHRYGIKRVILP+RN KDLVE
Sbjct: 791 ALVSLFSQKRVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPQRNSKDLVE 850
Query: 792 VPAAVLASLEIILAKRMEDVLEQAFEGGCPWR-QHSKL 828
VPAAVL+SLE+ILAKRMEDVLE AFEGGCPWR HSKL
Sbjct: 851 VPAAVLSSLEVILAKRMEDVLENAFEGGCPWRNNHSKL 888
>gi|18422747|ref|NP_568675.1| ATP-dependent Lon protease [Arabidopsis thaliana]
gi|3914002|sp|O64948.1|LONP2_ARATH RecName: Full=Lon protease homolog 2, peroxisomal
gi|2935279|gb|AAC05085.1| Lon protease [Arabidopsis thaliana]
gi|9759446|dbj|BAB10243.1| mitochondrial Lon protease homolog 1 precursor [Arabidopsis
thaliana]
gi|332008077|gb|AED95460.1| ATP-dependent Lon protease [Arabidopsis thaliana]
Length = 888
Score = 1375 bits (3559), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/818 (84%), Positives = 744/818 (90%), Gaps = 9/818 (1%)
Query: 17 GVGGDSSERASKVQVGA-----SDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYI 71
G G DS ER+ K VG SD K+QQ+ + WH RGVAARALHLSRGVEKPSGRVTY+
Sbjct: 74 GAGSDSGERSLKFLVGTTDAQKSDAKDQQD-LQWHTRGVAARALHLSRGVEKPSGRVTYV 132
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VVLEGL RF+VQEL RG Y ARI+SLEMTK E+EQV+QDPDF+ALSRQFK TAMEL+S
Sbjct: 133 VVLEGLSRFNVQELGKRGPYSVARITSLEMTKAELEQVKQDPDFVALSRQFKTTAMELVS 192
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
VLEQKQKTGGRTKVLLETVPIHKLADIFVASFE+SFEEQL MLDSVDLKVRLSKATELVD
Sbjct: 193 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEMSFEEQLSMLDSVDLKVRLSKATELVD 252
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
RHLQSIRVAEKITQKVEGQLSKSQKE+LLRQQMRAIKEELGDNDDDEDD+ ALERKMQ+A
Sbjct: 253 RHLQSIRVAEKITQKVEGQLSKSQKEYLLRQQMRAIKEELGDNDDDEDDVAALERKMQAA 312
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMPSNIWKH Q+ELRRLKKMQPQQPGY SSRVYLEL+ADLPW+KASEE +LDLKAAKERL
Sbjct: 313 GMPSNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELLADLPWDKASEEHELDLKAAKERL 372
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
DSDHYGL +VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA+ALGRKF+R+
Sbjct: 373 DSDHYGLAKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRL 432
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL
Sbjct: 433 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 492
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQNK+FNDHYLNVP+DLSKV+FVATANR QPIPPPLLDRME+IELPGYT EEKL
Sbjct: 493 LEVLDPEQNKSFNDHYLNVPYDLSKVVFVATANRVQPIPPPLLDRMELIELPGYTQEEKL 552
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
+IAMRHLIPRVLDQHGL SEFL+IPEAMVK +IQRYTREAGVR+LERN A A A V
Sbjct: 553 KIAMRHLIPRVLDQHGLSSEFLKIPEAMVKNIIQRYTREAGVRSLERN--LAALARAAAV 610
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
E EQ+LP SKDV +L SPLL+ R+A+G EVEMEVIPMG + HE+ TF+ S LVVD
Sbjct: 611 MVAEHEQSLPLSKDVQKLTSPLLNGRMAEGGEVEMEVIPMGVNDHEIGGTFQSPSALVVD 670
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
E MLEK+LGPPRFDD EAA+RVA+ G+SVGLVWT FGGEVQFVEAT+M GKGE+HLTGQL
Sbjct: 671 ETMLEKILGPPRFDDSEAADRVASAGVSVGLVWTTFGGEVQFVEATSMVGKGEMHLTGQL 730
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDVIKESAQ+ALTWVRARA+D +L MN+L GRDIHIHFPAGAVPKDGPSAGVTLVT
Sbjct: 731 GDVIKESAQLALTWVRARASDFKLALAGDMNVLDGRDIHIHFPAGAVPKDGPSAGVTLVT 790
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
ALVSLFS+KRVRADTAMTGEMTLRGLVLPVGG+KDKILAAHRYGIKRVILP+RN KDLVE
Sbjct: 791 ALVSLFSQKRVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPQRNSKDLVE 850
Query: 792 VPAAVLASLEIILAKRMEDVLEQAFEGGCPWR-QHSKL 828
VPAAVL+SLE+ILAKRMEDVLE AFEGGCPWR +SKL
Sbjct: 851 VPAAVLSSLEVILAKRMEDVLENAFEGGCPWRNNYSKL 888
>gi|2208927|dbj|BAA20482.1| ATP-dependent protease Lon [Spinacia oleracea]
Length = 875
Score = 1355 bits (3508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 670/800 (83%), Positives = 732/800 (91%), Gaps = 7/800 (0%)
Query: 17 GVGGDSSERASKVQVGASD-----GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYI 71
G G DS ER K Q G SD GK+QQE +HWH RGVAARALHLSRGVEKPSGRVTY
Sbjct: 74 GGGTDSGERNVKSQPGLSDSRKADGKSQQEAVHWHTRGVAARALHLSRGVEKPSGRVTYT 133
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VVLEGLCRF V EL++RG YYTARIS L++TK +MEQ +QDPDF++L+RQFK TA+ELIS
Sbjct: 134 VVLEGLCRFRVMELNSRGNYYTARISPLDITKADMEQAQQDPDFVSLARQFKVTAVELIS 193
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
VLEQKQKTGGRTKVLLETVP+HKLADIFVASFEISFEEQL MLDS+DLKVRLSKATELVD
Sbjct: 194 VLEQKQKTGGRTKVLLETVPVHKLADIFVASFEISFEEQLCMLDSIDLKVRLSKATELVD 253
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
RHLQSIRVAEKITQKVEGQLSKSQ+EFLLRQQMRAIKEELGDNDDDEDD+ LERKMQSA
Sbjct: 254 RHLQSIRVAEKITQKVEGQLSKSQREFLLRQQMRAIKEELGDNDDDEDDVAVLERKMQSA 313
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMP+NIWKH Q+ELRRLKKMQPQQPGY+SSRVYLEL+ADLPW+ A+EE LDL+AAKERL
Sbjct: 314 GMPANIWKHAQRELRRLKKMQPQQPGYSSSRVYLELLADLPWQNATEEQKLDLRAAKERL 373
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
DSDHYGLV+VKQRIIEYLAVRKLKPDARGP+LCFVGPPGVGKTSLA+SI++ALGRKFIRI
Sbjct: 374 DSDHYGLVKVKQRIIEYLAVRKLKPDARGPILCFVGPPGVGKTSLAASISAALGRKFIRI 433
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGVKDEADIRGHRRTYIGSMPGRLIDG+KRVGV NPVMLLDEIDKTGSDVRGDPASAL
Sbjct: 434 SLGGVKDEADIRGHRRTYIGSMPGRLIDGIKRVGVSNPVMLLDEIDKTGSDVRGDPASAL 493
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQNKTFNDHYLNVP+DLSKVIFVATAN+ QPIPPPLLDRMEVIELPGYTPEEK
Sbjct: 494 LEVLDPEQNKTFNDHYLNVPYDLSKVIFVATANKVQPIPPPLLDRMEVIELPGYTPEEKA 553
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
RIAM++LIPRV+DQHGL SEFLQI E MVKL+IQRYTREAGVRNLERNL+ALARAAAVKV
Sbjct: 554 RIAMQYLIPRVMDQHGLSSEFLQISEDMVKLIIQRYTREAGVRNLERNLSALARAAAVKV 613
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
AEQ+ A+ SKD H+ SP+ ++RLA+GAEVEMEVIPMG E+SN ++ SPL+VD
Sbjct: 614 AEQDNATAV--SKDFHQFTSPVEESRLAEGAEVEMEVIPMGVDNREISNALQVMSPLIVD 671
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
E MLE VLGPPR+DDRE AERV+ PG+SVGLVWT FGGEVQFVEA+ M GKGEL LTGQL
Sbjct: 672 ETMLENVLGPPRYDDRETAERVSNPGVSVGLVWTAFGGEVQFVEASVMAGKGELRLTGQL 731
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDVIKESAQIALTWVRARA +L LVA +NL++GRDIHIHFPAGAVPKDGPSAGVTLVT
Sbjct: 732 GDVIKESAQIALTWVRARAMELNLVATGEINLMEGRDIHIHFPAGAVPKDGPSAGVTLVT 791
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
ALVSL S+KR+RADTAMTGEMTLRGLVLPVGGVKDK+LAAHRYGIKRVILPERNLKDLVE
Sbjct: 792 ALVSLLSQKRMRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLVE 851
Query: 792 VPAAVLASLEIILAKRMEDV 811
VP+AVL++LEII AKRME +
Sbjct: 852 VPSAVLSNLEIIYAKRMECI 871
>gi|115480351|ref|NP_001063769.1| Os09g0533400 [Oryza sativa Japonica Group]
gi|122228060|sp|Q0J032.1|LONP2_ORYSJ RecName: Full=Lon protease homolog 2, peroxisomal
gi|113632002|dbj|BAF25683.1| Os09g0533400 [Oryza sativa Japonica Group]
gi|222641979|gb|EEE70111.1| hypothetical protein OsJ_30122 [Oryza sativa Japonica Group]
Length = 884
Score = 1336 bits (3458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 670/818 (81%), Positives = 732/818 (89%), Gaps = 11/818 (1%)
Query: 17 GVGGDSSERASKVQVGAS------DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTY 70
GVG DS E SK G++ D KN +E IHWH+RGVAARALHLSRGVEKPSGRVTY
Sbjct: 72 GVGSDSGEGGSKAPGGSAGESTKQDTKNGKETIHWHSRGVAARALHLSRGVEKPSGRVTY 131
Query: 71 IVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELI 130
IVVLEGLCRFSVQELS RG+Y+ AR+S L+MTK E+E EQDPD IALSRQFKATAMELI
Sbjct: 132 IVVLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEHAEQDPDLIALSRQFKATAMELI 191
Query: 131 SVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
SVLEQKQKT GRTKVLLETVP+++LADIFVASFEI FEEQL MLDSVDLKVRLSKATELV
Sbjct: 192 SVLEQKQKTVGRTKVLLETVPVYRLADIFVASFEIGFEEQLSMLDSVDLKVRLSKATELV 251
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
DRHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQ+
Sbjct: 252 DRHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQN 311
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
AGMP+NIWKH Q+ELRRL+KMQPQQPGY+SSR YLEL+A+LPW+K SEE +LDL+AAKE
Sbjct: 312 AGMPANIWKHAQRELRRLRKMQPQQPGYSSSRTYLELLAELPWQKVSEERELDLRAAKES 371
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DHYGL +VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA AL RKFIR
Sbjct: 372 LDRDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIR 431
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV V NPVMLLDEIDKTGSDVRGDPASA
Sbjct: 432 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASA 491
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR QPIPPPLLDRMEVIELPGYTPEEK
Sbjct: 492 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRMQPIPPPLLDRMEVIELPGYTPEEK 551
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
L+IAM+HLIPRVL+QHGL S +LQIPEAMV+L+I+RYTREAGVRNLERN A A A
Sbjct: 552 LKIAMKHLIPRVLEQHGLSSTYLQIPEAMVRLIIERYTREAGVRNLERN--LAALARAAA 609
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
V EQ+ AL K++ + + LLD+RLADG EVEMEVIPMG+ ++SNT+ SP++V
Sbjct: 610 VKVAEQDSALRLGKEIQPITTTLLDSRLADGGEVEMEVIPMGQ---DISNTYENPSPMIV 666
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
DEAMLEKVLGPPRFDD EAA+RVA+PG+SVGLVWT+FGGEVQFVEATAM GKG+LHLTGQ
Sbjct: 667 DEAMLEKVLGPPRFDDSEAADRVASPGVSVGLVWTSFGGEVQFVEATAMVGKGDLHLTGQ 726
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDVIKESAQ+ALTWVRARA DL L +NLL+ RDIHIHFPAGAVPKDGPSAGVTLV
Sbjct: 727 LGDVIKESAQLALTWVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDGPSAGVTLV 786
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
T+LVSLFS ++VRADTAMTGEMTLRGLVLPVGGVKDK+LAAHRYGIKRVILPERN+KDL
Sbjct: 787 TSLVSLFSHRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNMKDLA 846
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
EVPA +L+ LEI+L KR+E+VL+ AFEGGCP R HSKL
Sbjct: 847 EVPAPILSGLEILLVKRIEEVLDHAFEGGCPLRPHSKL 884
>gi|300681038|sp|B8BDV1.1|LONP2_ORYSI RecName: Full=Lon protease homolog 2, peroxisomal
gi|218202516|gb|EEC84943.1| hypothetical protein OsI_32159 [Oryza sativa Indica Group]
Length = 884
Score = 1336 bits (3457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 670/818 (81%), Positives = 732/818 (89%), Gaps = 11/818 (1%)
Query: 17 GVGGDSSERASKVQVGAS------DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTY 70
GVG DS E SK G++ D KN +E IHWH+RGVAARALHLSRGVEKPSGRVTY
Sbjct: 72 GVGSDSGEGGSKAPGGSAGESTKQDTKNGKETIHWHSRGVAARALHLSRGVEKPSGRVTY 131
Query: 71 IVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELI 130
IVVLEGLCRFSVQELS RG+Y+ AR+S L+MTK E+E EQDPD IALSRQFKATAMELI
Sbjct: 132 IVVLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEHAEQDPDLIALSRQFKATAMELI 191
Query: 131 SVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
SVLEQKQKT GRTKVLLETVP+++LADIFVASFEISFEEQL MLDSVDLKVRLSKATELV
Sbjct: 192 SVLEQKQKTVGRTKVLLETVPVYRLADIFVASFEISFEEQLSMLDSVDLKVRLSKATELV 251
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
DRHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQ+
Sbjct: 252 DRHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQN 311
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
AGMP+NIWKH Q+ELRRL+KMQPQQPGY+SSR YLEL+A+LPW+K SEE +LDL+AAKE
Sbjct: 312 AGMPANIWKHAQRELRRLRKMQPQQPGYSSSRTYLELLAELPWQKVSEERELDLRAAKES 371
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DHYGL +VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA AL RKFIR
Sbjct: 372 LDRDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIR 431
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV V NPVMLLDEIDKTGSDVRGDPASA
Sbjct: 432 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASA 491
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR QPIPPPLLDRMEVIELPGYTPEEK
Sbjct: 492 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRMQPIPPPLLDRMEVIELPGYTPEEK 551
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
L+IAM+HLIPRVL+QHGL S +LQIPEAMV+L+I+RYTREAGVRNLERN A A A
Sbjct: 552 LKIAMKHLIPRVLEQHGLSSTYLQIPEAMVRLIIERYTREAGVRNLERN--LAALARAAA 609
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
V EQ+ L K++ + + LLD+RLADG EVEMEVIPMG+ ++SNT+ SP++V
Sbjct: 610 VKVAEQDSVLRLGKEIQPITTTLLDSRLADGGEVEMEVIPMGQ---DISNTYENPSPMIV 666
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
DEAMLEKVLGPPRFDD EAA+RVA+PG+SVGLVWT+FGGEVQFVEATAM GKG+LHLTGQ
Sbjct: 667 DEAMLEKVLGPPRFDDSEAADRVASPGVSVGLVWTSFGGEVQFVEATAMVGKGDLHLTGQ 726
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDVIKESAQ+ALTWVRARA DL L +NLL+ RDIHIHFPAGAVPKDGPSAGVTLV
Sbjct: 727 LGDVIKESAQLALTWVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDGPSAGVTLV 786
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
T+LVSLFS ++VRADTAMTGEMTLRGLVLPVGGVKDK+LAAHRYGIKRVILPERN+KDL
Sbjct: 787 TSLVSLFSHRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNMKDLA 846
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
EVPA +L+ LEI+L KR+E+VL+ AFEGGCP R HSKL
Sbjct: 847 EVPAPILSGLEILLVKRIEEVLDHAFEGGCPLRPHSKL 884
>gi|27461708|gb|AAM95459.1| Lon protease [Oryza sativa Indica Group]
Length = 884
Score = 1335 bits (3456), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 670/818 (81%), Positives = 732/818 (89%), Gaps = 11/818 (1%)
Query: 17 GVGGDSSERASKVQVGAS------DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTY 70
GVG DS E SK G++ D KN +E IHWH+RGVAARALHLSRGVEKPSGRVTY
Sbjct: 72 GVGSDSGEGGSKAPGGSAGESTKQDTKNGKETIHWHSRGVAARALHLSRGVEKPSGRVTY 131
Query: 71 IVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELI 130
IVVLEGLCRFSVQELS RG+Y+ AR+S L+MTK E+E EQDPD IALSRQFKATAMELI
Sbjct: 132 IVVLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEHAEQDPDLIALSRQFKATAMELI 191
Query: 131 SVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
SVLEQKQKT GRTKVLLETVP+++LADIFVASFEISFEEQL MLDSVDLKVRLSKATELV
Sbjct: 192 SVLEQKQKTVGRTKVLLETVPVYRLADIFVASFEISFEEQLSMLDSVDLKVRLSKATELV 251
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
DRHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQ+
Sbjct: 252 DRHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQN 311
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
AGMP+NIWKH Q+ELRRL+KMQPQQPGY+SSR YLEL+A+LPW+K SEE +LDL+AAKE
Sbjct: 312 AGMPANIWKHAQRELRRLRKMQPQQPGYSSSRTYLELLAELPWQKVSEERELDLRAAKES 371
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DHYGL +VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA AL RKFIR
Sbjct: 372 LDRDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAKALDRKFIR 431
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV V NPVMLLDEIDKTGSDVRGDPASA
Sbjct: 432 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASA 491
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR QPIPPPLLDRMEVIELPGYTPEEK
Sbjct: 492 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRMQPIPPPLLDRMEVIELPGYTPEEK 551
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
L+IAM+HLIPRVL+QHGL S +LQIPEAMV+L+I+RYTREAGVRNLERN A A A
Sbjct: 552 LKIAMKHLIPRVLEQHGLSSTYLQIPEAMVRLIIERYTREAGVRNLERN--LAALARAAA 609
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
V EQ+ L K++ + + LLD+RLADG EVEMEVIPMG+ ++SNT+ SP++V
Sbjct: 610 VKVAEQDSVLRLGKEIQPITTTLLDSRLADGGEVEMEVIPMGQ---DISNTYENPSPMIV 666
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
DEAMLEKVLGPPRFDD EAA+RVA+PG+SVGLVWT+FGGEVQFVEATAM GKG+LHLTGQ
Sbjct: 667 DEAMLEKVLGPPRFDDSEAADRVASPGVSVGLVWTSFGGEVQFVEATAMVGKGDLHLTGQ 726
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDVIKESAQ+ALTWVRARA DL L +NLL+ RDIHIHFPAGAVPKDGPSAGVTLV
Sbjct: 727 LGDVIKESAQLALTWVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDGPSAGVTLV 786
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
T+LVSLFS ++VRADTAMTGEMTLRGLVLPVGGVKDK+LAAHRYGIKRVILPERN+KDL
Sbjct: 787 TSLVSLFSHRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNMKDLA 846
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
EVPA +L+ LEI+L KR+E+VL+ AFEGGCP R HSKL
Sbjct: 847 EVPAPILSGLEILLVKRIEEVLDHAFEGGCPLRPHSKL 884
>gi|14423366|gb|AAK62365.1|AF385580_1 Lon protease [Dichanthelium lanuginosum]
Length = 884
Score = 1323 bits (3424), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/816 (82%), Positives = 734/816 (89%), Gaps = 9/816 (1%)
Query: 17 GVGGDSSERASKV----QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIV 72
GVG DS E SK + D KN +E IHWH++GVAARALHLSRGVEKPSGRVTYIV
Sbjct: 74 GVGSDSGEGGSKAGGSGESSKQDTKNGKEPIHWHSKGVAARALHLSRGVEKPSGRVTYIV 133
Query: 73 VLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISV 132
VLEGLCRFSVQELS RG+Y+ AR+S L+MTK E+EQ EQDPD IALSRQFKATAMELISV
Sbjct: 134 VLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEQAEQDPDLIALSRQFKATAMELISV 193
Query: 133 LEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDR 192
LEQKQKT GRTKVLL+TVP+++LADIFVASFEISFEEQL MLDSVDLKVRLSKATELVDR
Sbjct: 194 LEQKQKTVGRTKVLLDTVPVYRLADIFVASFEISFEEQLSMLDSVDLKVRLSKATELVDR 253
Query: 193 HLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAG 252
HLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQ+AG
Sbjct: 254 HLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQNAG 313
Query: 253 MPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLD 312
MP+NIWKH Q+ELRRL+KMQPQQPGY+SSR YLEL+ADLPW+K SEE +LDL+AAKE LD
Sbjct: 314 MPANIWKHAQRELRRLRKMQPQQPGYSSSRAYLELLADLPWQKVSEERELDLRAAKESLD 373
Query: 313 SDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRIS 372
DHYGL +VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA AL RKFIRIS
Sbjct: 374 QDHYGLPKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIRIS 433
Query: 373 LGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALL 432
LGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV V NPVMLLDEIDKTGSDVRGDPASALL
Sbjct: 434 LGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALL 493
Query: 433 EVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLR 492
EVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR QPIPPPLLD MEVIELPGYTPEEKL+
Sbjct: 494 EVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRMQPIPPPLLDSMEVIELPGYTPEEKLK 553
Query: 493 IAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVA 552
IAM+HLIPRVL+QHGL S +LQIPE KL+I+RYTREAGVRNLERNLAALARAAAVKVA
Sbjct: 554 IAMKHLIPRVLEQHGLSSAYLQIPEVRSKLIIERYTREAGVRNLERNLAALARAAAVKVA 613
Query: 553 EQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDE 612
EQ L SK++ + + LLD+RLADG EVEMEVIPMG H++SNT+ SP++VDE
Sbjct: 614 EQVNTLRL--SKEIQPITTTLLDSRLADGGEVEMEVIPMG---HDISNTYENPSPMIVDE 668
Query: 613 AMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLG 672
MLEKVLGPPRFDDREAA+RVA+PG+SVGLVWT+FGGEVQFVEATAM GKG+LHLTGQLG
Sbjct: 669 TMLEKVLGPPRFDDREAADRVASPGVSVGLVWTSFGGEVQFVEATAMVGKGDLHLTGQLG 728
Query: 673 DVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTA 732
DVIKESAQ+ALTWVRARA DL L +NLL+ RDIHIHFPAGAVPKDGPSAGVTLVT+
Sbjct: 729 DVIKESAQLALTWVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDGPSAGVTLVTS 788
Query: 733 LVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEV 792
LVSLFS ++VRADTAMTGEMTLRGLVLPVGGVKDK+LAAHRYGIKRVILPERNLKDL EV
Sbjct: 789 LVSLFSNRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLTEV 848
Query: 793 PAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
P+ +L+ +EI+L KR+E+VL+ AFEGGC R SKL
Sbjct: 849 PSPILSGMEILLVKRIEEVLDHAFEGGCLLRSRSKL 884
>gi|50725794|dbj|BAD33324.1| putative Lon protease [Oryza sativa Japonica Group]
gi|52075953|dbj|BAD46033.1| putative Lon protease [Oryza sativa Japonica Group]
Length = 880
Score = 1319 bits (3414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 666/818 (81%), Positives = 728/818 (88%), Gaps = 15/818 (1%)
Query: 17 GVGGDSSERASKVQVGAS------DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTY 70
GVG DS E SK G++ D KN +E IHWH+RGVAARALHLSRGVEKPSGRVTY
Sbjct: 72 GVGSDSGEGGSKAPGGSAGESTKQDTKNGKETIHWHSRGVAARALHLSRGVEKPSGRVTY 131
Query: 71 IVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELI 130
IVVLEGLCRFSVQELS RG+Y+ AR+S L+MTK E+E EQDPD IALSRQFKATAMELI
Sbjct: 132 IVVLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEHAEQDPDLIALSRQFKATAMELI 191
Query: 131 SVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
SVLEQKQKT GRTKVLLETVP+++LADIFVASFEI FEEQL MLDSVDLKVRLSKATELV
Sbjct: 192 SVLEQKQKTVGRTKVLLETVPVYRLADIFVASFEIGFEEQLSMLDSVDLKVRLSKATELV 251
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
DRHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQ+
Sbjct: 252 DRHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQN 311
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
AGMP+NIWKH Q+ELRRL+KMQPQQPGY+SSR YLEL+A+LPW+K SEE +LDL+AAKE
Sbjct: 312 AGMPANIWKHAQRELRRLRKMQPQQPGYSSSRTYLELLAELPWQKVSEERELDLRAAKES 371
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DHYGL +VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA AL RKFIR
Sbjct: 372 LDRDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIR 431
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV V NPVMLLDEIDKTGSDVRGDPASA
Sbjct: 432 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASA 491
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDPEQNKT YLNVPFDLSKVIFVATANR QPIPPPLLDRMEVIELPGYTPEEK
Sbjct: 492 LLEVLDPEQNKT----YLNVPFDLSKVIFVATANRMQPIPPPLLDRMEVIELPGYTPEEK 547
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
L+IAM+HLIPRVL+QHGL S +LQIPEAMV+L+I+RYTREAGVRNLERN A A A
Sbjct: 548 LKIAMKHLIPRVLEQHGLSSTYLQIPEAMVRLIIERYTREAGVRNLERN--LAALARAAA 605
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
V EQ+ AL K++ + + LLD+RLADG EVEMEVIPMG+ ++SNT+ SP++V
Sbjct: 606 VKVAEQDSALRLGKEIQPITTTLLDSRLADGGEVEMEVIPMGQ---DISNTYENPSPMIV 662
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
DEAMLEKVLGPPRFDD EAA+RVA+PG+SVGLVWT+FGGEVQFVEATAM GKG+LHLTGQ
Sbjct: 663 DEAMLEKVLGPPRFDDSEAADRVASPGVSVGLVWTSFGGEVQFVEATAMVGKGDLHLTGQ 722
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDVIKESAQ+ALTWVRARA DL L +NLL+ RDIHIHFPAGAVPKDGPSAGVTLV
Sbjct: 723 LGDVIKESAQLALTWVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDGPSAGVTLV 782
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
T+LVSLFS ++VRADTAMTGEMTLRGLVLPVGGVKDK+LAAHRYGIKRVILPERN+KDL
Sbjct: 783 TSLVSLFSHRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNMKDLA 842
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
EVPA +L+ LEI+L KR+E+VL+ AFEGGCP R HSKL
Sbjct: 843 EVPAPILSGLEILLVKRIEEVLDHAFEGGCPLRPHSKL 880
>gi|162459318|ref|NP_001105903.1| lon protease homolog 2, peroxisomal [Zea mays]
gi|3914005|sp|P93647.1|LONP2_MAIZE RecName: Full=Lon protease homolog 2, peroxisomal
gi|1816586|gb|AAC50011.1| LON1 protease [Zea mays]
gi|414886455|tpg|DAA62469.1| TPA: lon protease-like protein 2, peroxisomal [Zea mays]
Length = 885
Score = 1318 bits (3411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/817 (82%), Positives = 732/817 (89%), Gaps = 10/817 (1%)
Query: 17 GVGGDSSERASKV-----QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYI 71
GVG DS E SKV + D KN +E IHWH++GVAARALHLSRGVEKPSGRVTYI
Sbjct: 74 GVGSDSGEGGSKVGGSAVESSKQDTKNGKEPIHWHSKGVAARALHLSRGVEKPSGRVTYI 133
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VVLEGLCRFSVQELS RG Y+ AR+S L+MTK E+EQ EQDPD IALSRQFKATAMELIS
Sbjct: 134 VVLEGLCRFSVQELSARGPYHVARVSRLDMTKTELEQAEQDPDLIALSRQFKATAMELIS 193
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
VLEQKQKT GRTKVLL+TVP+++LADIFVASFEISFEEQL MLDSV LKVRLSKATELVD
Sbjct: 194 VLEQKQKTVGRTKVLLDTVPVYRLADIFVASFEISFEEQLSMLDSVHLKVRLSKATELVD 253
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
RHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQ+A
Sbjct: 254 RHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQNA 313
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMP+NIWKH Q+E+RRL+KMQPQQPGY+SSR YLEL+ADLPW+K SEE +LDL+ AKE L
Sbjct: 314 GMPANIWKHAQREMRRLRKMQPQQPGYSSSRAYLELLADLPWQKVSEERELDLRVAKESL 373
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHYGL +VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA AL RKFIRI
Sbjct: 374 DQDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIRI 433
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV V NPVMLLDEIDKTGSDVRGDPASAL
Sbjct: 434 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASAL 493
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQNK FNDHYLNVPFDLSKVIFVATANR QPIPPPLLDRME+IELPGYTPEEKL
Sbjct: 494 LEVLDPEQNKAFNDHYLNVPFDLSKVIFVATANRMQPIPPPLLDRMEIIELPGYTPEEKL 553
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
+IAM+HLIPRVL+QHGL + LQIPEAMVKLVI+RYTREAGVRNLERNLAALARAAAVKV
Sbjct: 554 KIAMKHLIPRVLEQHGLSTTNLQIPEAMVKLVIERYTREAGVRNLERNLAALARAAAVKV 613
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
AEQ + L K++ + + LLD+RLADG EVEMEVIPM H++SNT+ SP++VD
Sbjct: 614 AEQVKTLRL--GKEIQPITTTLLDSRLADGGEVEMEVIPM---EHDISNTYENPSPMIVD 668
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
EAMLEKVLGPPRFDDREAA+RVA+PG+SVGLVWT+ GGEVQFVEATAM GKG+LHLTGQL
Sbjct: 669 EAMLEKVLGPPRFDDREAADRVASPGVSVGLVWTSVGGEVQFVEATAMVGKGDLHLTGQL 728
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDVIKESAQ+ALTWVRARA DL L +NLL+ RDIHIHFPAGAVPKDGPSAGVTLVT
Sbjct: 729 GDVIKESAQLALTWVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDGPSAGVTLVT 788
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
ALVSLFS ++VRADTAMTGEMTLRGLVLPVGGVKDK+LAAHRYGIKRVILPERNLKDL E
Sbjct: 789 ALVSLFSNRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLSE 848
Query: 792 VPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
VP +L+ +EI+L KR+E+VL+ AFEG CP R SKL
Sbjct: 849 VPLPILSDMEILLVKRIEEVLDHAFEGRCPLRSRSKL 885
>gi|242049964|ref|XP_002462726.1| hypothetical protein SORBIDRAFT_02g030960 [Sorghum bicolor]
gi|241926103|gb|EER99247.1| hypothetical protein SORBIDRAFT_02g030960 [Sorghum bicolor]
Length = 885
Score = 1318 bits (3410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/817 (82%), Positives = 735/817 (89%), Gaps = 10/817 (1%)
Query: 17 GVGGDSSERASKV-----QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYI 71
GVG DS E SK + D KN ++ IHWH++GVAARALHLSRGVEKPSGRVTYI
Sbjct: 74 GVGSDSGEGGSKAGGSAGESSRQDTKNGKDPIHWHSKGVAARALHLSRGVEKPSGRVTYI 133
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VVLEGLCRF+VQELS RG Y+ AR+S L+MTKIE++Q EQDPD IALSRQFKATAMELIS
Sbjct: 134 VVLEGLCRFNVQELSARGPYHVARVSRLDMTKIELDQAEQDPDLIALSRQFKATAMELIS 193
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
VLEQKQKT GRTKVLL+TVP+++LADIFVASFEISFEEQL MLDSVDLKVRLSKATELVD
Sbjct: 194 VLEQKQKTVGRTKVLLDTVPVYRLADIFVASFEISFEEQLSMLDSVDLKVRLSKATELVD 253
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
RHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQ+A
Sbjct: 254 RHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQNA 313
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMP+NIWKH Q+E+RRL+KMQPQQPGY+SSR YLEL+ADLPW+K SEE +LDL+AAKE L
Sbjct: 314 GMPANIWKHAQREMRRLRKMQPQQPGYSSSRAYLELVADLPWQKVSEERELDLRAAKESL 373
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHYGL +VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA AL RKFIRI
Sbjct: 374 DQDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIRI 433
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV V NPVMLLDEIDKTGSDVRGDPASAL
Sbjct: 434 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASAL 493
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQNK FNDHYLNVPFDLSKVIFVATANR QPIPPPLLDRMEVIELPGYTPEEKL
Sbjct: 494 LEVLDPEQNKAFNDHYLNVPFDLSKVIFVATANRMQPIPPPLLDRMEVIELPGYTPEEKL 553
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
+IAM+HLIPRVL+QHGL LQIPEAMVKL+I+RYTREAGVRNLERNLAALARAAAVKV
Sbjct: 554 KIAMKHLIPRVLEQHGLSMTNLQIPEAMVKLIIERYTREAGVRNLERNLAALARAAAVKV 613
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
AEQ + L K++ + + LLD+RLADG EVEMEVIPM H++SNT+ SP++VD
Sbjct: 614 AEQVKTLRL--GKEIQPITTTLLDSRLADGGEVEMEVIPM---EHDISNTYENPSPMIVD 668
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
EAMLEKVLGPPRFDDREAA+RVA+PG+SVGLVWT+ GGEVQFVEATAM GKG+LHLTGQL
Sbjct: 669 EAMLEKVLGPPRFDDREAADRVASPGVSVGLVWTSVGGEVQFVEATAMVGKGDLHLTGQL 728
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDVIKESAQ+ALTWVRARA DL L +NLL+ RDIHIHFPAGAVPKDGPSAGVTLVT
Sbjct: 729 GDVIKESAQLALTWVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDGPSAGVTLVT 788
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
ALVSLFS ++VRADTAMTGEMTLRGLVLPVGGVKDK+LAAHRYGIKRVILPERNLKDL E
Sbjct: 789 ALVSLFSNRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLSE 848
Query: 792 VPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
VP+ +L+ +EI+L KR+E+VL+ AFEGGCP R SKL
Sbjct: 849 VPSPILSGMEILLVKRIEEVLDHAFEGGCPLRSRSKL 885
>gi|357159616|ref|XP_003578503.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Brachypodium
distachyon]
Length = 886
Score = 1308 bits (3385), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 663/794 (83%), Positives = 725/794 (91%), Gaps = 5/794 (0%)
Query: 35 DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTA 94
D KN +E IHWHNRGVAARALHLSRGVEKPSGRVTY VVLEGLCRFSVQEL+ RG+Y+ A
Sbjct: 98 DAKNGKEPIHWHNRGVAARALHLSRGVEKPSGRVTYTVVLEGLCRFSVQELNARGSYHVA 157
Query: 95 RISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHK 154
R+S L+MTK E+EQ EQDPD IALSRQFKATAMELISVLEQKQKT GRTKVLLETVPI++
Sbjct: 158 RVSRLDMTKTELEQAEQDPDLIALSRQFKATAMELISVLEQKQKTVGRTKVLLETVPIYR 217
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LADIFVASFEISFEEQL MLDSVDLKVRLSKATELVDRHLQSI VAEKITQKVEGQLSKS
Sbjct: 218 LADIFVASFEISFEEQLSMLDSVDLKVRLSKATELVDRHLQSILVAEKITQKVEGQLSKS 277
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
QKEFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQ+AGMP+NIWKH Q+ELRRL+KMQPQ
Sbjct: 278 QKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQNAGMPANIWKHAQRELRRLRKMQPQ 337
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
QPGY+SSR YLEL+ADLPW+K SEE++LDL+AAKE LD DHYGL +VKQRIIEYLAVRKL
Sbjct: 338 QPGYSSSRAYLELLADLPWQKVSEEMELDLRAAKESLDHDHYGLTKVKQRIIEYLAVRKL 397
Query: 335 KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
KPDARGPVLCFVGPPGVGKTSLASSIA AL RKFIRISLGGVKDEADIRGHRRTYIGSMP
Sbjct: 398 KPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMP 457
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
GRLIDGLKRV V NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQN+TFNDHYLNVPFDL
Sbjct: 458 GRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNRTFNDHYLNVPFDL 517
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
SKV+FVATANR QPIPP LLDRMEVIELPGYTPEEKL+IAM+HLIPRVL+QHGL + +LQ
Sbjct: 518 SKVVFVATANRMQPIPPALLDRMEVIELPGYTPEEKLKIAMKHLIPRVLEQHGLSTAYLQ 577
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLL 574
IPEA+VKL+I+RYTREAGVRNLERNLAALARAAAVKVAE L K++ + + LL
Sbjct: 578 IPEAVVKLIIERYTREAGVRNLERNLAALARAAAVKVAELGSTLRL--GKEIQPITTTLL 635
Query: 575 DNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVA 634
D+RLADG EVEMEVIPMG+ ++SN + SP++VDEAMLEKVLGPPRFDDREAA+RVA
Sbjct: 636 DSRLADGGEVEMEVIPMGQ---DISNAYVNPSPMIVDEAMLEKVLGPPRFDDREAADRVA 692
Query: 635 APGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQ 694
+PG+SVGLVWT+FGGEVQFVEATAM GKG+LHLTGQLGDVIKESAQ+ALTWVRARA DL+
Sbjct: 693 SPGVSVGLVWTSFGGEVQFVEATAMVGKGDLHLTGQLGDVIKESAQLALTWVRARAADLK 752
Query: 695 LVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTL 754
L +NLL+ RDIHIHFPAGAVPKDGPSAGVTLVT+LVSLFS ++VRADTAMTGEMTL
Sbjct: 753 LSPTSDINLLESRDIHIHFPAGAVPKDGPSAGVTLVTSLVSLFSDRKVRADTAMTGEMTL 812
Query: 755 RGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQ 814
RGLVLPVGGVKDK+LAAHRYGIKRVILPERNLKDL E+PA +LA +EI+L KR+E+VL+
Sbjct: 813 RGLVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLSEIPAPILAGIEILLVKRIEEVLDH 872
Query: 815 AFEGGCPWRQHSKL 828
AFE G P R S L
Sbjct: 873 AFESGFPLRPRSSL 886
>gi|42541823|gb|AAS19619.1| LON1 protease [Triticum aestivum]
Length = 886
Score = 1296 bits (3353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 659/794 (82%), Positives = 726/794 (91%), Gaps = 5/794 (0%)
Query: 35 DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTA 94
D K+ +E IHWH+RGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSV+EL+ RG+Y+ A
Sbjct: 98 DAKSGKEPIHWHSRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVEELNARGSYHVA 157
Query: 95 RISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHK 154
R+S L+MTK E+EQ EQDPD IALSRQFKATAMELISVLEQKQKT GRTKVLLETVP+++
Sbjct: 158 RVSRLDMTKTELEQAEQDPDLIALSRQFKATAMELISVLEQKQKTVGRTKVLLETVPVYR 217
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LADIFVASFEISFEEQL MLDSVDLKVRLSKATELVDRHLQSI VAEKITQKVEGQLSKS
Sbjct: 218 LADIFVASFEISFEEQLAMLDSVDLKVRLSKATELVDRHLQSILVAEKITQKVEGQLSKS 277
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
QKEFLLRQQMRAIK+ELGDNDDDEDD+ ALERKMQ+AGMP+NIWKH Q+ELRRL+KMQPQ
Sbjct: 278 QKEFLLRQQMRAIKDELGDNDDDEDDIAALERKMQNAGMPANIWKHAQRELRRLRKMQPQ 337
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
QPGY+SSR YLELIADLPW+K SEE +LDL+AAKE LD DHYGL +VKQRIIEYLAVRKL
Sbjct: 338 QPGYSSSRAYLELIADLPWQKVSEERELDLRAAKESLDRDHYGLTKVKQRIIEYLAVRKL 397
Query: 335 KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
KPDARGPVLCFVGPPGVGKTSLA+SIA AL RKFIRISLGGVKDEADIRGHRRTYIGSMP
Sbjct: 398 KPDARGPVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMP 457
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
GRLIDGLKRV V NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL
Sbjct: 458 GRLIDGLKRVSVNNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 517
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
SKV+FVATANR QPIPP LLDRMEVIELPGYTPEEKL+IAM+HL+PRVL+QHGL S +LQ
Sbjct: 518 SKVVFVATANRMQPIPPALLDRMEVIELPGYTPEEKLKIAMKHLLPRVLEQHGLSSAYLQ 577
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLL 574
IPEA+VKL+I+RYTREAGVRNLERNLAALARAAAVKVAE + L K++ + + LL
Sbjct: 578 IPEAVVKLIIERYTREAGVRNLERNLAALARAAAVKVAELDSTLRL--GKEMQPITTTLL 635
Query: 575 DNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVA 634
D+RLADG EVEMEVIPMG+ ++SNT+ SP++VDEAMLEKVLGPPRFDDREAA+RV+
Sbjct: 636 DSRLADGGEVEMEVIPMGQ---DISNTYENPSPMIVDEAMLEKVLGPPRFDDREAADRVS 692
Query: 635 APGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQ 694
+PG+SVGLVWT+FGGEVQFVEATAM GKG+LHLTGQLGDVIKESAQ+ALTWVRAR+ DL
Sbjct: 693 SPGVSVGLVWTSFGGEVQFVEATAMAGKGDLHLTGQLGDVIKESAQLALTWVRARSADLN 752
Query: 695 LVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTL 754
L +N+L+ RDIHIHFPAGAVPKDGPSAGVTLVT+LVSLFS ++VRADTAMTGEMTL
Sbjct: 753 LSPTSDINILESRDIHIHFPAGAVPKDGPSAGVTLVTSLVSLFSNRKVRADTAMTGEMTL 812
Query: 755 RGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQ 814
RGLVLPVGGVKDK+LAAHRYGIKRVILPERNLKDL E+PA +LA +EI+L KR+E+VL
Sbjct: 813 RGLVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLAEIPAPILAGIEILLVKRIEEVLGH 872
Query: 815 AFEGGCPWRQHSKL 828
AFE G P R HS L
Sbjct: 873 AFENGFPLRLHSSL 886
>gi|326500836|dbj|BAJ95084.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 886
Score = 1293 bits (3346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/810 (81%), Positives = 732/810 (90%), Gaps = 14/810 (1%)
Query: 19 GGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLC 78
GG+SS++ D K+ +E IHWH+RGVAARALHLSRGVEKPSGRVTYIVVLEGLC
Sbjct: 91 GGESSKQ---------DAKSGKEPIHWHSRGVAARALHLSRGVEKPSGRVTYIVVLEGLC 141
Query: 79 RFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQK 138
RFSV+EL+ RG+Y+ AR+S L+MTK E+EQVEQDPD IALSRQFKATAMELISVLEQKQK
Sbjct: 142 RFSVEELNARGSYHVARVSRLDMTKTELEQVEQDPDLIALSRQFKATAMELISVLEQKQK 201
Query: 139 TGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIR 198
T GRTKVLLETVP+++LADIFVASFEISFEEQL MLDSVDLKVRLSKATELVDRHLQSI
Sbjct: 202 TVGRTKVLLETVPVYRLADIFVASFEISFEEQLAMLDSVDLKVRLSKATELVDRHLQSIL 261
Query: 199 VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIW 258
VAEKITQKVEGQLSKSQKEFLLRQQMRAIK+ELGDNDDDEDD+ ALERKMQ+AGMP+NIW
Sbjct: 262 VAEKITQKVEGQLSKSQKEFLLRQQMRAIKDELGDNDDDEDDIAALERKMQNAGMPANIW 321
Query: 259 KHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGL 318
KH Q+ELRRL+KMQPQQ GY+SSR YLELIADLPW+K SEE +LDL+AAKE LD DHYGL
Sbjct: 322 KHAQRELRRLRKMQPQQSGYSSSRAYLELIADLPWQKVSEERELDLRAAKESLDRDHYGL 381
Query: 319 VRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKD 378
+VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLA+SIA AL RKFIRISLGGVKD
Sbjct: 382 TKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLATSIAKALNRKFIRISLGGVKD 441
Query: 379 EADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPE 438
EADIRGHRRTYIGSMPGRLIDGLKRV V NPVMLLDEIDKTGSDVRGDPASALLEVLDPE
Sbjct: 442 EADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPE 501
Query: 439 QNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHL 498
QNKTFNDHYLNVPFDLSKV+FVATANR QPIPP LLDRMEVIELPGYTPEEKL+IAM+HL
Sbjct: 502 QNKTFNDHYLNVPFDLSKVVFVATANRMQPIPPALLDRMEVIELPGYTPEEKLKIAMKHL 561
Query: 499 IPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQ 558
+PRVL+QHGL S +LQIPEA+VKL+I+RYTREAGVRNLERNLAALARAAAVKVAE +
Sbjct: 562 LPRVLEQHGLSSAYLQIPEAVVKLIIERYTREAGVRNLERNLAALARAAAVKVAELDSTL 621
Query: 559 ALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKV 618
L K++ + + LLD+RL DG EVEMEVIPMG+ ++SNT+ SP+++DEA+LEKV
Sbjct: 622 RL--GKEMQPITTTLLDSRLTDGGEVEMEVIPMGQ---DISNTYENPSPMIIDEAVLEKV 676
Query: 619 LGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKES 678
LGPPRFDDREAA+RV++PG+SVGLVWT+FGGEVQFVEATAM GKG+LHLTGQLGDVIKES
Sbjct: 677 LGPPRFDDREAADRVSSPGVSVGLVWTSFGGEVQFVEATAMVGKGDLHLTGQLGDVIKES 736
Query: 679 AQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFS 738
AQ+ALTWVRAR+ DL L +N+L+ RDIHIHFPAGAVPKDGPSAGVTLVT+LVSLFS
Sbjct: 737 AQLALTWVRARSADLNLSPTSDINILESRDIHIHFPAGAVPKDGPSAGVTLVTSLVSLFS 796
Query: 739 RKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLA 798
++VRADTAMTGEMTLRGLVLPVGGVKDK+LAAHRYGIKRVILPERNLKDL E+PA +LA
Sbjct: 797 NRKVRADTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNLKDLAEIPAPILA 856
Query: 799 SLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
+EI+L KR+E+VL AFE G P R HS L
Sbjct: 857 GIEILLVKRIEEVLGHAFENGFPLRLHSSL 886
>gi|302786134|ref|XP_002974838.1| hypothetical protein SELMODRAFT_150045 [Selaginella moellendorffii]
gi|300157733|gb|EFJ24358.1| hypothetical protein SELMODRAFT_150045 [Selaginella moellendorffii]
Length = 888
Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 597/793 (75%), Positives = 684/793 (86%)
Query: 36 GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR 95
GK QE++ WH RGVAARALHLSRG+EKPSGRVTY VVLEG CRFS+++++ RG+Y TAR
Sbjct: 96 GKQNQELVQWHPRGVAARALHLSRGMEKPSGRVTYTVVLEGWCRFSLKDMNARGSYNTAR 155
Query: 96 ISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKL 155
I L+MTK EMEQ E+DP+ L RQFK A ELIS LEQKQ+T GRTK+LLET H+L
Sbjct: 156 IGQLDMTKAEMEQAEKDPEVQLLGRQFKVVASELISALEQKQRTVGRTKILLETTSAHRL 215
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
ADIFVA+FE +FE++L MLD+VDLK RL KATE++ RHLQ+I+VAEKI+QKVEG LSKSQ
Sbjct: 216 ADIFVANFENNFEDRLAMLDAVDLKQRLVKATEIITRHLQTIKVAEKISQKVEGNLSKSQ 275
Query: 216 KEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQ 275
KEFLLRQQM+AIKEELGDND+DEDD+VALE+KMQ+ GMP+N+WKH Q+ELRRL+KMQPQQ
Sbjct: 276 KEFLLRQQMKAIKEELGDNDEDEDDVVALEKKMQNVGMPANVWKHTQRELRRLRKMQPQQ 335
Query: 276 PGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK 335
PGY SSR YLEL+A+LPW+ +SEE +LDL AAKERLDS+HYGL +VK+RIIEYLAVRKLK
Sbjct: 336 PGYGSSRTYLELLAELPWQISSEERELDLVAAKERLDSEHYGLGKVKKRIIEYLAVRKLK 395
Query: 336 PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPG 395
PDARGPVLCFVGPPGVGKTSLASSIA ALGR FIRISLGGVKDEADIRGHRRTYIGSMPG
Sbjct: 396 PDARGPVLCFVGPPGVGKTSLASSIAGALGRLFIRISLGGVKDEADIRGHRRTYIGSMPG 455
Query: 396 RLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 455
RLI+G+KRVGV NPVMLLDEIDKTG+DVRGDPASALLEVLDPEQN+TFNDHYLNVPFDLS
Sbjct: 456 RLIEGIKRVGVNNPVMLLDEIDKTGTDVRGDPASALLEVLDPEQNRTFNDHYLNVPFDLS 515
Query: 456 KVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI 515
KV+FVATANR QPI PPLLDRMEVIELPGYT EEKL IAMRHLIPRV DQHG+ + L+I
Sbjct: 516 KVVFVATANRIQPISPPLLDRMEVIELPGYTSEEKLCIAMRHLIPRVFDQHGITVQHLKI 575
Query: 516 PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLD 575
PEAMV+L+IQRYTREAGVRNLER+LAALARAAAVKVAE+E + + +++
Sbjct: 576 PEAMVELIIQRYTREAGVRNLERHLAALARAAAVKVAEREHSIHVAREVQAQTTTTTVVE 635
Query: 576 NRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAA 635
E++MEV MG +++N P VDEAM+E VLGPP+FD +EAAERV+
Sbjct: 636 GGEVADGEIDMEVEAMGVHGRDLANAIAGVEPWHVDEAMVETVLGPPKFDGKEAAERVST 695
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
PG++VGLVWT GGEVQFVEATAM GKG+LHLTGQLGDVIKESAQIALTWVRARA +L+L
Sbjct: 696 PGVAVGLVWTAVGGEVQFVEATAMTGKGDLHLTGQLGDVIKESAQIALTWVRARAAELKL 755
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
+L+ RDIHIHFPAGAVPKDGPSAGVTLVTALVSL ++ VRADTAMTGEMTLR
Sbjct: 756 ATGAERSLMDSRDIHIHFPAGAVPKDGPSAGVTLVTALVSLLGKRCVRADTAMTGEMTLR 815
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
GLVLPVGGVKDKILAAHR+GIKRVILPERN KDL EVPA +LA++EI+LA+RMEDVL +A
Sbjct: 816 GLVLPVGGVKDKILAAHRFGIKRVILPERNFKDLQEVPANILANVEILLARRMEDVLHEA 875
Query: 816 FEGGCPWRQHSKL 828
FEGGCPWR +++
Sbjct: 876 FEGGCPWRIQARM 888
>gi|302760667|ref|XP_002963756.1| hypothetical protein SELMODRAFT_141788 [Selaginella moellendorffii]
gi|300169024|gb|EFJ35627.1| hypothetical protein SELMODRAFT_141788 [Selaginella moellendorffii]
Length = 879
Score = 1154 bits (2985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 590/784 (75%), Positives = 677/784 (86%), Gaps = 6/784 (0%)
Query: 48 RGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEME 107
RGVAARALHLSRG+EKPSGRVTY VVLEG CRFS+++++ RG+Y TARI L+MTK EME
Sbjct: 99 RGVAARALHLSRGMEKPSGRVTYTVVLEGWCRFSLKDMNARGSYNTARIGQLDMTKAEME 158
Query: 108 QVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISF 167
Q E+DP+ L RQFK A ELIS LEQKQ+T GRTK+LLET H+LADIFVA+FE +F
Sbjct: 159 QAEKDPEVQLLGRQFKVVASELISALEQKQRTVGRTKILLETTSAHRLADIFVANFENNF 218
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
E++L MLD+VDLK RL KATE++ RHLQ+I+VAEKI+QKVEG LSKSQKEFLLRQQM+AI
Sbjct: 219 EDRLAMLDAVDLKQRLVKATEIITRHLQTIKVAEKISQKVEGNLSKSQKEFLLRQQMKAI 278
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
KEELGDND+DEDD+VALE+KMQ+ GMP+N+WKH Q+ELRRL+KMQPQQPGY SSR YLEL
Sbjct: 279 KEELGDNDEDEDDVVALEKKMQNVGMPANVWKHTQRELRRLRKMQPQQPGYGSSRAYLEL 338
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
+A+LPW+ +SEE +LDL AAKERLDS+HYGL +VK+RIIEYLAVRKLKPDARGPVLCFVG
Sbjct: 339 LAELPWQISSEERELDLVAAKERLDSEHYGLGKVKKRIIEYLAVRKLKPDARGPVLCFVG 398
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSLASSIA ALGR FIRISLGGVKDEADIRGHRRTYIGSMPGRLI+G+KRVGV
Sbjct: 399 PPGVGKTSLASSIAGALGRLFIRISLGGVKDEADIRGHRRTYIGSMPGRLIEGIKRVGVN 458
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPVMLLDEIDKTG+DVRGDPASALLEVLDPEQN+TFNDHYLNVPFDLSKV+FVATANR Q
Sbjct: 459 NPVMLLDEIDKTGTDVRGDPASALLEVLDPEQNRTFNDHYLNVPFDLSKVVFVATANRIQ 518
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
PI PPLLDRMEVIELPGYT EEKL IAMRHLIPRV DQHG+ + L+IPEAMV+L+IQRY
Sbjct: 519 PISPPLLDRMEVIELPGYTSEEKLCIAMRHLIPRVFDQHGITVQHLKIPEAMVELIIQRY 578
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH---RLGSPLLDNRLADGAEV 584
TREAGVRNLER+LAAL A A V E+E ++ +++V + + +ADG E+
Sbjct: 579 TREAGVRNLERHLAAL--ARAAAVKVAEREHSIHVAREVQAETTTTTVVEGGEVADG-EI 635
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
+MEV MG +++N P VDEAM+E VLGPP+FD +EAAERV+ PG++VGLVW
Sbjct: 636 DMEVEAMGVHGRDLANAIAGVEPWHVDEAMVETVLGPPKFDGKEAAERVSTPGVAVGLVW 695
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GGEVQFVEATAM GKG+LHLTGQLGDVIKESAQIALTWVRARA +L+L G L+
Sbjct: 696 TAVGGEVQFVEATAMTGKGDLHLTGQLGDVIKESAQIALTWVRARAAELKLATGAGRGLM 755
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
RDIHIHFPAGAVPKDGPSAGVTLVTALVSL ++ VRADTAMTGEMTLRGLVLPVGGV
Sbjct: 756 DSRDIHIHFPAGAVPKDGPSAGVTLVTALVSLLGKRCVRADTAMTGEMTLRGLVLPVGGV 815
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQ 824
KDKILAAHR+GIKRVILPERN KDL EVPA +LA++EI+LA+RMEDVL +AFEGGCPWR
Sbjct: 816 KDKILAAHRFGIKRVILPERNFKDLQEVPANILANVEILLARRMEDVLHEAFEGGCPWRI 875
Query: 825 HSKL 828
+++
Sbjct: 876 QARM 879
>gi|168010201|ref|XP_001757793.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691069|gb|EDQ77433.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 893
Score = 1130 bits (2924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/797 (73%), Positives = 685/797 (85%), Gaps = 9/797 (1%)
Query: 37 KNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI 96
KN ++I WH RGVAARAL L + +EK +GRV+YIV+LEG CRF VQEL + +Y +ARI
Sbjct: 101 KNGDDLIQWHPRGVAARALELEQKIEKYTGRVSYIVMLEGWCRFGVQELISTSSYKSARI 160
Query: 97 SSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLA 156
+ L+ + E+EQ E+DP+ LSRQFKA A ELIS+LEQKQK+ GRTKV+LE+ P ++LA
Sbjct: 161 TQLDRNEAEIEQAEKDPEVQVLSRQFKAVAGELISLLEQKQKSFGRTKVILESWPAYRLA 220
Query: 157 DIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQK 216
D+FVA+FE+SFEE+L MLD+VDL+ RLSKATE+V RHLQ+I+VAEKI+ KV+GQLSK+QK
Sbjct: 221 DVFVANFEVSFEERLFMLDAVDLRQRLSKATEIVTRHLQTIKVAEKISSKVDGQLSKTQK 280
Query: 217 EFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQP 276
E +LR Q+RAIKEELG+NDDDEDD+VALERKMQS GMP N+WKH Q+ELRRL+KMQPQQP
Sbjct: 281 E-ILRHQIRAIKEELGENDDDEDDVVALERKMQSVGMPPNVWKHAQRELRRLRKMQPQQP 339
Query: 277 GYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKP 336
GY SSR YLEL+A+LPW+ ASEE ++DL AA+E+LDS+HYGL +VK+RIIEYLAVRKLKP
Sbjct: 340 GYGSSRTYLELLAELPWQVASEEREIDLVAAQEQLDSEHYGLSKVKKRIIEYLAVRKLKP 399
Query: 337 DARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGR 396
DARGPVLCFVGPPGVGKTSLASSIA ALGRKFIR+SLGGVKDEADIRGHRRTYIGSMPGR
Sbjct: 400 DARGPVLCFVGPPGVGKTSLASSIAGALGRKFIRLSLGGVKDEADIRGHRRTYIGSMPGR 459
Query: 397 LIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 456
LIDG+KRVGV NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD+SK
Sbjct: 460 LIDGIKRVGVNNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDVSK 519
Query: 457 VIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIP 516
V+FVATANR Q +P PLLDRMEVIELPGYT EEKLRIAMRHLIPRVLDQHG+ + +QI
Sbjct: 520 VVFVATANRVQTMPAPLLDRMEVIELPGYTSEEKLRIAMRHLIPRVLDQHGITDQHVQIS 579
Query: 517 EAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDN 576
E+MV+L+I RYTREAGVRNLER++AALARAAAVK+ E+ Q + + ++D+ ++D
Sbjct: 580 ESMVELMISRYTREAGVRNLERHIAALARAAAVKLTEKLQVERV--ARDMQPDAPQVIDQ 637
Query: 577 -----RLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAE 631
+AD EVE+ V+ + EV++ PL+VDEA+LE VLGPP+FD +EAAE
Sbjct: 638 GQGPGGIADSGEVEL-VVEVDGHAREVAHASVHAEPLLVDEAVLEVVLGPPKFDGKEAAE 696
Query: 632 RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
RVA PG++VGLVWT GGEVQFVEATAM GKGELHLTGQLGDVIKESAQIALTWVRARA
Sbjct: 697 RVAIPGVAVGLVWTAVGGEVQFVEATAMLGKGELHLTGQLGDVIKESAQIALTWVRARAA 756
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
+L+L + NL++ RD+HIHFPAGAVPKDGPSAGVTLVTALVSLF +K VRADTAMTGE
Sbjct: 757 ELKLPEAEAGNLMKDRDVHIHFPAGAVPKDGPSAGVTLVTALVSLFGKKCVRADTAMTGE 816
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
MTLRGLVLPVGGVKDKILAAHR G+KRVILP+RN KDL EVP A+LA++EI+LAKRMEDV
Sbjct: 817 MTLRGLVLPVGGVKDKILAAHRCGLKRVILPDRNRKDLQEVPPAILANMEILLAKRMEDV 876
Query: 812 LEQAFEGGCPWRQHSKL 828
L AFE GCP + S+L
Sbjct: 877 LHHAFETGCPLKPASRL 893
>gi|343172978|gb|AEL99192.1| ATP-dependent Lon protease, partial [Silene latifolia]
Length = 611
Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/613 (84%), Positives = 567/613 (92%), Gaps = 2/613 (0%)
Query: 211 LSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKK 270
LSKSQ+EFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQSAGMPS+IWKH Q+ELRRLKK
Sbjct: 1 LSKSQREFLLRQQMRAIKEELGDNDDDEDDVAALERKMQSAGMPSDIWKHAQRELRRLKK 60
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
MQPQQPGY SSRVYLEL+ADLPW+KA+EE LDL+AAKERLD+DH+GLV+VKQRIIEYLA
Sbjct: 61 MQPQQPGYHSSRVYLELLADLPWQKATEEQKLDLRAAKERLDNDHHGLVKVKQRIIEYLA 120
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
VRKLKPDARGP+LCFVGPPGVGKTSLA+SIA+ALGRKFIRISLGGVKDEADIRGHRRTYI
Sbjct: 121 VRKLKPDARGPILCFVGPPGVGKTSLATSIAAALGRKFIRISLGGVKDEADIRGHRRTYI 180
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
GSMPGRLI+G+KRVGV NPVMLLDEIDKTGSDVRGDPA+ALLEVLDPEQNKTFNDHYLNV
Sbjct: 181 GSMPGRLIEGIKRVGVSNPVMLLDEIDKTGSDVRGDPAAALLEVLDPEQNKTFNDHYLNV 240
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
P+DLSKVIFVATAN+ QPIPPPL DRMEVIELPGYTPEEKL IAM+HL+PRVLDQHGL S
Sbjct: 241 PYDLSKVIFVATANKMQPIPPPLRDRMEVIELPGYTPEEKLNIAMKHLLPRVLDQHGLSS 300
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
EFLQIPE MVKLVI RYTREAGVRNLERNL+ALARAAAVKVAEQ+ A+ SKD+H+L
Sbjct: 301 EFLQIPEDMVKLVIHRYTREAGVRNLERNLSALARAAAVKVAEQDNATAV--SKDIHQLS 358
Query: 571 SPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAA 630
SP+L++RL +GAEVEMEVIPMG + + SN R++ L+VDE MLEKVLGPPR+DDRE A
Sbjct: 359 SPVLESRLGEGAEVEMEVIPMGVNNQDFSNDLRLSCHLIVDETMLEKVLGPPRYDDRETA 418
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARA 690
ERVA PG+SVGLVWT GGEVQFVEAT M GKGEL LTGQLG VIKESAQIALTWVR+RA
Sbjct: 419 ERVANPGVSVGLVWTVHGGEVQFVEATTMAGKGELRLTGQLGSVIKESAQIALTWVRSRA 478
Query: 691 TDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTG 750
T+L+ V + NL+ GRDIHIHFPAGA+PKDGPSAGVTLVTALVSL S+KRVRADTAMTG
Sbjct: 479 TELRFVVDAEGNLMNGRDIHIHFPAGAIPKDGPSAGVTLVTALVSLLSQKRVRADTAMTG 538
Query: 751 EMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMED 810
EMTLRGLVLPVGGVKDK+LAAHRYGIKRVILP RN+KDLVE+PAAVL+SLEII AKR+ED
Sbjct: 539 EMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPHRNVKDLVEIPAAVLSSLEIIFAKRVED 598
Query: 811 VLEQAFEGGCPWR 823
VLE AFEGGCPWR
Sbjct: 599 VLEHAFEGGCPWR 611
>gi|343172976|gb|AEL99191.1| ATP-dependent Lon protease, partial [Silene latifolia]
Length = 611
Score = 1048 bits (2711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/613 (84%), Positives = 566/613 (92%), Gaps = 2/613 (0%)
Query: 211 LSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKK 270
LSKSQ+EFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQSAGMPS+IWKH Q+ELRRLKK
Sbjct: 1 LSKSQREFLLRQQMRAIKEELGDNDDDEDDVAALERKMQSAGMPSDIWKHAQRELRRLKK 60
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
MQPQQPGY SSRVYLEL+ADLPW+KA+EE LDL+AAKERLD+DH+GLV+VKQRIIEYLA
Sbjct: 61 MQPQQPGYHSSRVYLELLADLPWQKATEEQKLDLRAAKERLDNDHHGLVKVKQRIIEYLA 120
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
VRKLKPDARGP+LCFVGPPGVGKTSLA+SIA+ALGRKFIRISLGGVKDEADIRGHRRTYI
Sbjct: 121 VRKLKPDARGPILCFVGPPGVGKTSLATSIAAALGRKFIRISLGGVKDEADIRGHRRTYI 180
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
GSMPGRLIDG+KRVGV NPVMLLDEIDKTGSDVRGDPA+ALLEVLDPEQNKTFNDHYLNV
Sbjct: 181 GSMPGRLIDGIKRVGVSNPVMLLDEIDKTGSDVRGDPAAALLEVLDPEQNKTFNDHYLNV 240
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
P+DLSKVIFVATAN+ QPIPPPL DRMEVIELPGYTPEEKL IAM+HL+PRVLDQHGL S
Sbjct: 241 PYDLSKVIFVATANKMQPIPPPLRDRMEVIELPGYTPEEKLNIAMKHLLPRVLDQHGLSS 300
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
EFLQIPE MVKLVI RYTREAGVRNLERNL+ALARAAAVKVAEQ+ A+ SKD+ +L
Sbjct: 301 EFLQIPEDMVKLVIHRYTREAGVRNLERNLSALARAAAVKVAEQDNATAV--SKDIQQLS 358
Query: 571 SPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAA 630
SP+L++RL +GAEVEMEVIPMG + + SN R++ L+VDE MLEKVLGPPR+DDRE A
Sbjct: 359 SPVLESRLGEGAEVEMEVIPMGVNNQDFSNDLRLSCHLIVDETMLEKVLGPPRYDDRETA 418
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARA 690
ERVA PG+SVGLVWT GGEVQFVEAT M GKGEL LTGQLG VIKESAQIALTWVR+RA
Sbjct: 419 ERVANPGVSVGLVWTVHGGEVQFVEATTMAGKGELRLTGQLGSVIKESAQIALTWVRSRA 478
Query: 691 TDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTG 750
T+L+ V + NL+ GRDIHIHFPAGA+PKDGPSAGVTLVTALVSL S+KRVRADTAMTG
Sbjct: 479 TELRFVVDAEGNLMNGRDIHIHFPAGAIPKDGPSAGVTLVTALVSLLSQKRVRADTAMTG 538
Query: 751 EMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMED 810
EMTLRGLVLPVGGVKDK+LAAHRYGIKRVILP RN+KDLVE+PAAVL+SLEII AKR+ED
Sbjct: 539 EMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPHRNVKDLVEIPAAVLSSLEIIFAKRVED 598
Query: 811 VLEQAFEGGCPWR 823
VLE AFEGGCPWR
Sbjct: 599 VLEHAFEGGCPWR 611
>gi|27311537|gb|AAO00734.1| Lon protease homolog 1 precursor [Arabidopsis thaliana]
gi|34098905|gb|AAQ56835.1| At5g47040 [Arabidopsis thaliana]
Length = 557
Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/559 (84%), Positives = 512/559 (91%), Gaps = 3/559 (0%)
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
MQPQQPGY SSRVYLEL+ADLPW+KASEE +LDLKAAKERLDSDHYGL +VKQRIIEYLA
Sbjct: 1 MQPQQPGYNSSRVYLELLADLPWDKASEEHELDLKAAKERLDSDHYGLAKVKQRIIEYLA 60
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
VRKLKPDARGPVLCFVGPPGVGKTSLASSIA+ALGRKF+R+SLGGVKDEADIRGHRRTYI
Sbjct: 61 VRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRLSLGGVKDEADIRGHRRTYI 120
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK+FNDHYLNV
Sbjct: 121 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKSFNDHYLNV 180
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
P+DLSKV+FVATANR QPIPPPLLDRME+IELPGYT EEKL+IAMRHLIPRVLDQHGL S
Sbjct: 181 PYDLSKVVFVATANRVQPIPPPLLDRMELIELPGYTQEEKLKIAMRHLIPRVLDQHGLSS 240
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
EFL+IPEAMVK +IQRYTREAGVR+LERN A A A V E EQ+LP SKDV +L
Sbjct: 241 EFLKIPEAMVKNIIQRYTREAGVRSLERN--LAALARAAAVMVAEHEQSLPLSKDVQKLT 298
Query: 571 SPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAA 630
SPLL+ R+A+G EVEMEVIPMG + HE+ TF+ S LVVDE MLEK+LGPPRFDD EAA
Sbjct: 299 SPLLNGRMAEGGEVEMEVIPMGVNDHEIGGTFQSPSALVVDETMLEKILGPPRFDDSEAA 358
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARA 690
+RVA+ G+SVGLVWT FGGEVQFVEAT+M GKGE+HLTGQLGDVIKESAQ+ALTWVRARA
Sbjct: 359 DRVASAGVSVGLVWTTFGGEVQFVEATSMVGKGEMHLTGQLGDVIKESAQLALTWVRARA 418
Query: 691 TDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTG 750
+D +L MN+L GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFS+KRVRADTAMTG
Sbjct: 419 SDFKLALAGDMNVLDGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKRVRADTAMTG 478
Query: 751 EMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMED 810
EMTLRGLVLPVGG+KDKILAAHRYGIKRVILP+RN KDLVEVPAAVL+SLE+ILAKRMED
Sbjct: 479 EMTLRGLVLPVGGIKDKILAAHRYGIKRVILPQRNSKDLVEVPAAVLSSLEVILAKRMED 538
Query: 811 VLEQAFEGGCPWR-QHSKL 828
VLE AFEGGCPWR +SKL
Sbjct: 539 VLENAFEGGCPWRNNYSKL 557
>gi|168026689|ref|XP_001765864.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683041|gb|EDQ69455.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 554
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/559 (76%), Positives = 484/559 (86%), Gaps = 6/559 (1%)
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
MQPQQPGY +SR YLEL+A+LPW+ +SEE ++DL+AAK RLDS+HYGL +VK+RIIEYLA
Sbjct: 1 MQPQQPGYATSRTYLELLAELPWQISSEEHEIDLEAAKVRLDSEHYGLSKVKKRIIEYLA 60
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
VRKLKPDARGPVLCFVGPPGVGKTSLASSIA ALGR+FIRISLGGVKDEADIRGHRRTYI
Sbjct: 61 VRKLKPDARGPVLCFVGPPGVGKTSLASSIAGALGRRFIRISLGGVKDEADIRGHRRTYI 120
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
GSMPGRLIDG+KRVGV NPVMLLDEIDKTG+DVRGDPA+ALLEVLDPEQNKTFNDHYLNV
Sbjct: 121 GSMPGRLIDGIKRVGVNNPVMLLDEIDKTGADVRGDPAAALLEVLDPEQNKTFNDHYLNV 180
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
PFD+SKV+FVATANR Q +P PLLDRMEVIELPGYT EEKLRIAMRHLIPRVL+QHG+
Sbjct: 181 PFDVSKVVFVATANRMQTMPAPLLDRMEVIELPGYTSEEKLRIAMRHLIPRVLEQHGITH 240
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
E + IPEA V+LVIQRYTREAGVRNL R+LAALARAAAVKVAE+EQ S + + +
Sbjct: 241 EHISIPEATVELVIQRYTREAGVRNLGRHLAALARAAAVKVAEKEQ-----SDRLMREMQ 295
Query: 571 SPLLDN-RLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA 629
+ ++D+ E EMEV + V PLVVDEA+L+ VLGPPRFD REA
Sbjct: 296 TEMMDHGGGGHSVEGEMEVEAIAVRGKAVQPLTAKPEPLVVDEAVLDIVLGPPRFDGREA 355
Query: 630 AERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRAR 689
AERVAAPG++VGLVWT GGEV FVE+TAM GKG+LHLTGQLGDVIKESA IALTWVRAR
Sbjct: 356 AERVAAPGVAVGLVWTEVGGEVLFVESTAMLGKGDLHLTGQLGDVIKESAHIALTWVRAR 415
Query: 690 ATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMT 749
+ +L+L + +L++ RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFS++ VRADTAMT
Sbjct: 416 SAELKLPVAEAGSLMKERDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSKRSVRADTAMT 475
Query: 750 GEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRME 809
GEMTLRGLVLPVGG+KDKILAAHR GIKRVILPERN KDL EVPA +L+S+EIILAKRME
Sbjct: 476 GEMTLRGLVLPVGGIKDKILAAHRCGIKRVILPERNRKDLQEVPAGILSSMEIILAKRME 535
Query: 810 DVLEQAFEGGCPWRQHSKL 828
DVL QAF+GGCPW+ S+L
Sbjct: 536 DVLNQAFDGGCPWKPASRL 554
>gi|168021024|ref|XP_001763042.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685854|gb|EDQ72247.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 557
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/567 (73%), Positives = 473/567 (83%), Gaps = 19/567 (3%)
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
MQPQQPGY +SR YLEL+A+LPW+ ASEE ++DL AAK RLDS+HYGL +VK+RIIEYLA
Sbjct: 1 MQPQQPGYGTSRTYLELLAELPWKIASEEHEVDLAAAKVRLDSEHYGLSKVKKRIIEYLA 60
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
VRKLKPDARGPVLCFVGPPGVGKTSLASSIA ALGR+FIRISLGGVKDEADIRGHRRTYI
Sbjct: 61 VRKLKPDARGPVLCFVGPPGVGKTSLASSIAGALGRRFIRISLGGVKDEADIRGHRRTYI 120
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
GSMPGRLIDG+KRVGV NPVMLLDEIDKTG+DVRGD ASALLEVLDPEQNKTFNDHYLNV
Sbjct: 121 GSMPGRLIDGIKRVGVNNPVMLLDEIDKTGTDVRGDLASALLEVLDPEQNKTFNDHYLNV 180
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
PFD+SKV+F+ATANR Q +P PLLDRME+IELPGYT EEKLRIA+ HLIPRVL+QHG+ +
Sbjct: 181 PFDVSKVVFLATANRMQSMPAPLLDRMEIIELPGYTCEEKLRIAVLHLIPRVLEQHGITN 240
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
E + IPEA V+L+IQRYTREAGVRNL R+LAALARAAAVKVAE+EQ L +
Sbjct: 241 EHISIPEATVELIIQRYTREAGVRNLGRHLAALARAAAVKVAEKEQSVRLSREMQTEMIY 300
Query: 571 SPLLDNRLADGAEV---------EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGP 621
A E E+IP+ PL+VDE +L+ VLGP
Sbjct: 301 HGAQGLGAAAAEADMEEEAMGIREKEIIPLATK----------PDPLLVDEVVLDTVLGP 350
Query: 622 PRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
P+FD REAAERVA PG++VGLVWT GGEV FVE+TAM GKG+LHLTGQLGD+IKESA I
Sbjct: 351 PKFDGREAAERVATPGVAVGLVWTEVGGEVLFVESTAMLGKGDLHLTGQLGDIIKESAHI 410
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
ALTWVRAR+ +L+L + +L++ RDIHIHFPAGAVPKDGPSAGVTLVTALVSLF+++
Sbjct: 411 ALTWVRARSAELKLPVAEAGSLMKERDIHIHFPAGAVPKDGPSAGVTLVTALVSLFAKRN 470
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VRADTAMTGEMTLRGLVLPVGG+KDKILAAHR GI+RVILPERN KDL EVPAA+L ++E
Sbjct: 471 VRADTAMTGEMTLRGLVLPVGGIKDKILAAHRCGIRRVILPERNRKDLQEVPAAILKNME 530
Query: 802 IILAKRMEDVLEQAFEGGCPWRQHSKL 828
IILAKRMEDVL QAFEGGCPW+ S+L
Sbjct: 531 IILAKRMEDVLHQAFEGGCPWKPASRL 557
>gi|255076393|ref|XP_002501871.1| lon protease [Micromonas sp. RCC299]
gi|226517135|gb|ACO63129.1| lon protease [Micromonas sp. RCC299]
Length = 904
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/809 (49%), Positives = 537/809 (66%), Gaps = 22/809 (2%)
Query: 36 GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR 95
G ++ E H+ G AAR + +SR K S +Y ++LEG CRF + +L+ +
Sbjct: 102 GDHEDERARLHDVGTAARIVQISR---KDSPVRSYTLLLEGRCRFGLDKLTAVHPFIVGE 158
Query: 96 ISSLEMTKIEMEQVEQD-PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHK 154
+ L+ EQD P+ A++ FK A EL+ LE+++ R K +LE+ P H+
Sbjct: 159 VRQLDAAGGSQGDPEQDDPELAAVAASFKDRARELVDRLERRKGHARRLKSMLESAPAHR 218
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LAD+FVA+FE SF+ +L +L + K R+ +A LV+ HL + V I ++VEG+LSK+
Sbjct: 219 LADLFVAAFEDSFDARLELLSTTCPKERMRRALSLVEAHLGQLDVTTDIAKRVEGRLSKT 278
Query: 215 QKEFLLRQQMRAIKEELGDNDD---DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKM 271
Q+E+LLRQQM+AI+EELG+ D +EDDL L+R++ A P + K +ELR+L+KM
Sbjct: 279 QREYLLRQQMQAIREELGETDGAGGEEDDLDQLQRRLHDAAPPDEVLKQATQELRKLRKM 338
Query: 272 QPQQPGYTSSRVYLELIADLPWEK--ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYL 329
Q P Y S+R ++E +A LPW K A++ ++ + A+ LD +HYGL +VK RI+EYL
Sbjct: 339 TEQAPAYGSTRSWIECVASLPWSKEAAADAHEVAMVEARAVLDEEHYGLDKVKDRIVEYL 398
Query: 330 AVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTY 389
AVR+L+P+AR P+LCF GPPGVGKT+LA SIA L R F RISLGGV+DEADIRGHRRTY
Sbjct: 399 AVRRLRPEARPPILCFTGPPGVGKTTLARSIARVLSRPFQRISLGGVRDEADIRGHRRTY 458
Query: 390 IGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLN 449
I SMPGRLI GL+R GV +PV+LLDE+DK G+D RGDPA+A+LEVLDPEQN F DHYL
Sbjct: 459 IASMPGRLIAGLRRCGVKDPVLLLDELDKMGADSRGDPAAAMLEVLDPEQNHAFTDHYLG 518
Query: 450 VPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGL- 508
VPFDLS+V F+ATAN + IP PL DRME+I++PGYT EEK IAM H++PRVLD+HGL
Sbjct: 519 VPFDLSRVTFLATANDPRTIPGPLRDRMEMIDVPGYTSEEKHHIAMTHVVPRVLDEHGLL 578
Query: 509 -GSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L IP V++V++ YTREAGVR L+R LA+L RAAAV A+ +A+
Sbjct: 579 RPKPRLTIPREAVEVVVRSYTREAGVRGLQRCLASLCRAAAVHAAQASDHKAVEGGGGGG 638
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDR 627
G LA + + + + +S P+V E ++EKVLGPPR+D
Sbjct: 639 VGGV--GGVVLASPPQAPVSPAALHPAAAALSRIGPDGVPVVTRE-LIEKVLGPPRYDGA 695
Query: 628 EAAERVAA--PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTW 685
R + PG+ GL WT GG++ ++EA M G G L LTGQLGDVIKESA IA++W
Sbjct: 696 SDDLRSSGLVPGVVAGLSWTAVGGDIMYIEAAVMPGAGSLQLTGQLGDVIKESAHIAMSW 755
Query: 686 VRA-----RATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRK 740
+ R + G LL+GR++HIH P GA+PKDGPSAGVT+ ALVSLFS +
Sbjct: 756 AQGGHWPVRGHHGGDGSPGGHGLLRGRNVHIHLPQGAIPKDGPSAGVTMCCALVSLFSGR 815
Query: 741 RVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV-EVPAAVLAS 799
VR DTAMTGE++LRGLVLPVGG+K+K++AAH+ GI RV++P RNL D+ EVP +V A
Sbjct: 816 PVRVDTAMTGEVSLRGLVLPVGGIKEKLIAAHQNGIARVLVPARNLSDVEHEVPESVRAE 875
Query: 800 LEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
L+I+ M DVLE AFEGG SKL
Sbjct: 876 LKIVPCATMADVLENAFEGGYRLAMPSKL 904
>gi|194688808|gb|ACF78488.1| unknown [Zea mays]
gi|414886454|tpg|DAA62468.1| TPA: hypothetical protein ZEAMMB73_586377 [Zea mays]
Length = 514
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/441 (84%), Positives = 396/441 (89%), Gaps = 8/441 (1%)
Query: 17 GVGGDSSERASKV-----QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYI 71
GVG DS E SKV + D KN +E IHWH++GVAARALHLSRGVEKPSGRVTYI
Sbjct: 74 GVGSDSGEGGSKVGGSAVESSKQDTKNGKEPIHWHSKGVAARALHLSRGVEKPSGRVTYI 133
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VVLEGLCRFSVQELS RG Y+ AR+S L+MTK E+EQ EQDPD IALSRQFKATAMELIS
Sbjct: 134 VVLEGLCRFSVQELSARGPYHVARVSRLDMTKTELEQAEQDPDLIALSRQFKATAMELIS 193
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
VLEQKQKT GRTKVLL+TVP+++LADIFVASFEISFEEQL MLDSV LKVRLSKATELVD
Sbjct: 194 VLEQKQKTVGRTKVLLDTVPVYRLADIFVASFEISFEEQLSMLDSVHLKVRLSKATELVD 253
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
RHLQSI VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD+ ALERKMQ+A
Sbjct: 254 RHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALERKMQNA 313
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMP+NIWKH Q+E+RRL+KMQPQQPGY+SSR YLEL+ADLPW+K SEE +LDL+ AKE L
Sbjct: 314 GMPANIWKHAQREMRRLRKMQPQQPGYSSSRAYLELLADLPWQKVSEERELDLRVAKESL 373
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHYGL +VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA AL RKFIRI
Sbjct: 374 DQDHYGLTKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAKALNRKFIRI 433
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV V NPVMLLDEIDKTGSDVRGDPASAL
Sbjct: 434 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASAL 493
Query: 432 LEVLDPEQNKTFNDHYLNVPF 452
LEVLDPEQNK FND Y PF
Sbjct: 494 LEVLDPEQNKAFNDQY---PF 511
>gi|291230272|ref|XP_002735093.1| PREDICTED: peroxisomal lon protease-like [Saccoglossus kowalevskii]
Length = 855
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/786 (49%), Positives = 532/786 (67%), Gaps = 28/786 (3%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H+ G AA + ++ G P R Y ++L GLCRF + +L + Y A +S L+ +
Sbjct: 75 HSIGTAAVVVQVT-GTNWP--RPAYTLLLTGLCRFKLDKLLQQSPYPIAAVSQLDRFPGD 131
Query: 106 MEQVE--QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASF 163
E V D + AL+ F A +L+ +L+ + K +L++VP L DIF +
Sbjct: 132 NEPVGDFSDDELAALTDNFLEHANKLVDMLDISIPIVAKLKRMLDSVPAQNLPDIFASII 191
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQL----SKSQKEFL 219
+ SF E+L +LD+VDL R K L+ R ++ +++ ++ + + + S+K ++
Sbjct: 192 KTSFNEKLQILDAVDLAERFKKTLPLLVRQIEGLKLLKQSRKNNDDEFLAFKKTSRKPYI 251
Query: 220 LRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYT 279
+R + + D+D D D++V LE+++++A +P + K QKEL+RLKKM P Y+
Sbjct: 252 IRSS-KNFHLDPEDDDGDGDEMVDLEQRLKAANLPEHAKKAAQKELKRLKKMPSSMPDYS 310
Query: 280 SSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDAR 339
+R YLEL+++LPW K + + +L + A+ LD+DHYGL ++K+R+IEYLAVR++K +
Sbjct: 311 LTRNYLELMSELPWSKETTD-NLSIAQARLDLDADHYGLDKLKKRVIEYLAVRQIKNSLK 369
Query: 340 GPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLID 399
GP+LCFVGPPGVGKTS+ S+A LGR+F RISLGGV D++DIRGHRRTYIGSMPGR+I
Sbjct: 370 GPILCFVGPPGVGKTSVGKSVAKTLGREFHRISLGGVCDQSDIRGHRRTYIGSMPGRIIQ 429
Query: 400 GLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIF 459
GLK VGV NPV LLDEIDK ++GDPA+ALLEVLDPEQN TF DHYLNV FDLSKV+F
Sbjct: 430 GLKTVGVSNPVFLLDEIDKLNKSLQGDPAAALLEVLDPEQNSTFVDHYLNVQFDLSKVLF 489
Query: 460 VATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAM 519
+ATAN IP LLDRMEVI + GYT EEK+ I +RHLIP+ L +HGL +E LQ PE
Sbjct: 490 IATANSMSTIPAALLDRMEVIHVAGYTQEEKVHIGVRHLIPKQLKEHGLNAEQLQFPEDT 549
Query: 520 VKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLA 579
+K++I RYTREAGVR+LER LAA+ RA AVKVAE + +D+ +
Sbjct: 550 IKMIIARYTREAGVRSLERKLAAVCRAVAVKVAENMTIKTKNGKQDLEK----------- 598
Query: 580 DGAEVEMEVIPMGESTHEVSNTFRITS----PLVVDEAMLEKVLGPPRFDDREAAERVAA 635
+ E E E + + E +S+ + P+V+DE L+ +LGPP F++ E +ER+
Sbjct: 599 ENVEPEKEPLSIDEK-ESLSSAATLAHPPDMPIVIDEHALQDILGPPMFEN-ETSERLGQ 656
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
PG+++GL WT GG++ FVEAT M G G L LTGQLGDV+KESA+IAL WVR+ AT +
Sbjct: 657 PGVAIGLAWTEVGGQIMFVEATKMDGDGNLTLTGQLGDVMKESARIALNWVRSNATRCAI 716
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
G +L++ DIHIHFPAG++ KDGPSAGVT+V+ LVSLFS + VR+DTAMTGE+TLR
Sbjct: 717 KVSTGTDLMENTDIHIHFPAGSISKDGPSAGVTVVSVLVSLFSGRCVRSDTAMTGEVTLR 776
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
GLVLPVGG+KDK+LAAHR G+KRV+LP+RN KDL E+P V L+ + ++EDVL+
Sbjct: 777 GLVLPVGGIKDKVLAAHRTGLKRVVLPKRNEKDLQEIPTNVKNDLDFVFVTKLEDVLQAV 836
Query: 816 FEGGCP 821
FEGG P
Sbjct: 837 FEGGYP 842
>gi|260821948|ref|XP_002606365.1| hypothetical protein BRAFLDRAFT_67608 [Branchiostoma floridae]
gi|229291706|gb|EEN62375.1| hypothetical protein BRAFLDRAFT_67608 [Branchiostoma floridae]
Length = 853
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/809 (48%), Positives = 521/809 (64%), Gaps = 41/809 (5%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
V S +++ H G AA ++ G P + Y +++ GLCRF V +
Sbjct: 58 VATTTSKDPQTEDLAALHEIGTAAVVAQVT-GTNWP--KPAYTLLVTGLCRFKVVDFVQE 114
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLE 148
Y A ++ L+ ++ V D + L FK A L+ +L+ + K +L+
Sbjct: 115 MPYPIAHVTQLDKLPGDLTDVSDD-ELATLLDTFKEKAHVLVDMLDITVPVVAKLKKMLD 173
Query: 149 TVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVE 208
++P L D+F + + S++E+L +LD+VDL+ R K L+ R ++ +R+ + K +
Sbjct: 174 SLPSQHLPDVFASIVKASYKEKLQVLDAVDLRERFEKTLPLLIRQIEGLRLLQ--NSKEQ 231
Query: 209 GQLSKSQKEFLLRQQMRAIKEE-------LGDNDDDE--DDLVALERKMQSAGMPSNIWK 259
G K++K +R ++ E +GD DDD D++ LE K++ A +P+ K
Sbjct: 232 GN-KKNKKRPDIRIVVKPPGEGGKRSIRIVGDQDDDGEVDEIAELENKIKQANLPAQALK 290
Query: 260 HVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLV 319
+EL+RLKKM P + R YLEL+A+LPW K+S LD+ A+E LD+DHYGL
Sbjct: 291 VATRELKRLKKMPAAMPDHAVIRNYLELMAELPWSKSSP-YQLDITHAREDLDADHYGLD 349
Query: 320 RVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDE 379
++KQR++EYLAVR+LK + RGP+LCFVGPPGVGKTS+ SIA LGR+F RISLGGV D
Sbjct: 350 KLKQRVMEYLAVRQLKNNLRGPILCFVGPPGVGKTSVGRSIAQILGREFHRISLGGVVDS 409
Query: 380 ADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQ 439
+DIRGHRRTYIGSMPGR+I GL+ V NP+ LLDE+DK G ++GDPASALLEVLDPEQ
Sbjct: 410 SDIRGHRRTYIGSMPGRVIQGLRTVSTNNPLFLLDEVDKLGRSLQGDPASALLEVLDPEQ 469
Query: 440 NKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLI 499
N F DHYLNVPFDLS+VIF+ATAN IPP LLDRMEVI +PGYT EEK IA RHL+
Sbjct: 470 NAHFTDHYLNVPFDLSQVIFIATANTTATIPPALLDRMEVISVPGYTQEEKHHIATRHLV 529
Query: 500 PRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQA 559
P+ L +HGL E LQ E +K +I RYTREAGVR LER L A+ RA AVKVAE
Sbjct: 530 PKQLKEHGLTGEQLQFSEEGLKTIIGRYTREAGVRTLERRLGAVCRAVAVKVAE-----G 584
Query: 560 LPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS-------PLVVDE 612
LP K A+ EV + E H ++ P+V+D+
Sbjct: 585 LPKPK-----------QHAAENKEVPSKEEDKTEEVHAADEDIKVPHVDHPPNLPIVIDD 633
Query: 613 AMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLG 672
++ +LGPP F D E ++R+ PG++VGL WT GGE+ FVEAT M G G+L LTGQLG
Sbjct: 634 HAVKDILGPPVF-DHEVSQRLNQPGVAVGLAWTPMGGEIMFVEATRMDGDGQLTLTGQLG 692
Query: 673 DVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTA 732
DV+KESAQ+A++W+R+ A + LV + G +L++ D+HIHFPAGA+ KDGPSAGVT+VT
Sbjct: 693 DVMKESAQLAISWLRSNALEYGLVQKSGQDLMENTDVHIHFPAGAIGKDGPSAGVTIVTV 752
Query: 733 LVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEV 792
L SLFS VR+DTAMTGE+TLRG+VLPVGG+K+K+LAAHR GI R+ILP+RN KDL ++
Sbjct: 753 LASLFSGHVVRSDTAMTGEITLRGVVLPVGGIKEKVLAAHRAGITRIILPKRNEKDLQDI 812
Query: 793 PAAVLASLEIILAKRMEDVLEQAFEGGCP 821
P+ V L ILA ++ DVL+ AF+ G P
Sbjct: 813 PSNVRKELTFILADQLCDVLKAAFDDGFP 841
>gi|356540573|ref|XP_003538762.1| PREDICTED: LOW QUALITY PROTEIN: lon protease homolog 2,
peroxisomal-like [Glycine max]
Length = 527
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/476 (80%), Positives = 405/476 (85%), Gaps = 44/476 (9%)
Query: 43 IHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT 102
I +++RGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTY+TARISSLEMT
Sbjct: 21 IEFNSRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYHTARISSLEMT 80
Query: 103 KIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS 162
K EMEQVEQDPDFI LSRQFKATAMELISVLEQKQKTGG TKVLLETV + KLADIFVAS
Sbjct: 81 KTEMEQVEQDPDFIMLSRQFKATAMELISVLEQKQKTGGMTKVLLETVAVXKLADIFVAS 140
Query: 163 FEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQ 222
FEISFEEQ+ MLDSVD KVRLSKATELVDRHLQSIRVAEKITQKVE QLSKSQKEFLLRQ
Sbjct: 141 FEISFEEQISMLDSVDPKVRLSKATELVDRHLQSIRVAEKITQKVERQLSKSQKEFLLRQ 200
Query: 223 QMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSR 282
QMR IKEELGDNDDDEDDL ALERK+QSAGMP NIWKH +ELRRLKKMQPQQPGY SSR
Sbjct: 201 QMRTIKEELGDNDDDEDDLAALERKIQSAGMPENIWKHAHRELRRLKKMQPQQPGYNSSR 260
Query: 283 VYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPV 342
YL+L+ADLPW+KAS E++LDL+AA+ERLD+DHYGLV+VKQ+IIEYLAVRKLK DARGPV
Sbjct: 261 AYLDLLADLPWQKASRELELDLRAAQERLDTDHYGLVKVKQQIIEYLAVRKLKSDARGPV 320
Query: 343 LCFVGPPGVGKTSLASSIASALGR-KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 401
LCFVGPPGVGKTSLASSIA+ALGR KF
Sbjct: 321 LCFVGPPGVGKTSLASSIAAALGRLKF--------------------------------- 347
Query: 402 KRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVA 461
RV VCNPVMLLDEIDKTGSDVR DPAS+LLEVLDPEQ PFDLSKVIFVA
Sbjct: 348 SRVAVCNPVMLLDEIDKTGSDVRRDPASSLLEVLDPEQK----------PFDLSKVIFVA 397
Query: 462 TANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
T NRAQPIPPPLLDRMEVIELPGYT EEKL+I M+HLIPRVL+ HGL SEFLQIPE
Sbjct: 398 TENRAQPIPPPLLDRMEVIELPGYTAEEKLKIVMQHLIPRVLEXHGLSSEFLQIPE 453
>gi|405970564|gb|EKC35458.1| Peroxisomal Lon protease-like protein 2 [Crassostrea gigas]
Length = 849
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/789 (49%), Positives = 531/789 (67%), Gaps = 43/789 (5%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE----- 100
H+ G AA + ++ G P + Y +++ GLCRF +QEL + A ++ L+
Sbjct: 74 HSIGTAAVVVQVT-GTNWP--KPAYTLLVTGLCRFKLQELLQETPFPVATVTQLDKLPED 130
Query: 101 ---MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
K + E E D AL+ F+ A +L+ +L+ + K +LE++P L D
Sbjct: 131 IGDTIKGDNESAELD----ALAENFREQAAKLVDMLDISIPVVAKLKKMLESLPSQHLPD 186
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEK-------ITQKVEGQ 210
I A + S+ E++ +LD+VDL R KA L+ R ++ +R+ +K I + EG
Sbjct: 187 ICAAIVKASYSEKIQVLDAVDLTERFKKALPLLMRQIEGLRLLQKAKKDRFEIVTRKEGD 246
Query: 211 LSKSQKEFLLRQQMRAIKEELGDNDDDEDDL-VALERKMQSAGMPSNIWKHVQKELRRLK 269
S+ +R+ R+I EL D DD E D V LE+K+++A MP + +K KEL+RLK
Sbjct: 247 TRPSK----MRRTFRSINTELDDEDDGEGDDSVDLEQKIKAANMPDHAYKAAMKELKRLK 302
Query: 270 KMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYL 329
KM Q P + R YLEL+ +LPW K S++ LD+ A++ LD+DHYGL ++K+R+IEYL
Sbjct: 303 KMPQQMPEHALIRNYLELMVELPWSKNSKDA-LDVLQARKDLDTDHYGLDKLKKRVIEYL 361
Query: 330 AVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTY 389
AVR+LK +GP+LCFVGPPGVGKTS+ SIA LGR+F RI+LGG+ D++DIRGHRRTY
Sbjct: 362 AVRQLKNSLKGPILCFVGPPGVGKTSVGKSIAQTLGREFHRIALGGICDQSDIRGHRRTY 421
Query: 390 IGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLN 449
IGSMPGR+I GL+ VGV NPV LLDE+DK G + GDPA+ALLEVLDPEQN TF DHYLN
Sbjct: 422 IGSMPGRIIQGLRLVGVNNPVFLLDEVDKLGKSLHGDPAAALLEVLDPEQNNTFTDHYLN 481
Query: 450 VPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLG 509
VPFDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA+RHL+P+ + ++GL
Sbjct: 482 VPFDLSQVLFIATANNMATIPPALLDRMEIIQIPGYTQEEKVTIALRHLLPKQITENGLT 541
Query: 510 SEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRL 569
E +QIPE +K+++ +YTREAGVR LER + + RA AV+VAE +A DV
Sbjct: 542 QEQIQIPEDTLKVIVAKYTREAGVRTLERRIGGVCRAVAVRVAEH-ASKAKHEKMDVG-- 598
Query: 570 GSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA 629
AD +V +P S + P+V+DE LE +LGPP ++ E
Sbjct: 599 ---------ADKKQVTNTNLPAALSQDVSTLAHPPEMPIVIDETALEDILGPPAYES-EV 648
Query: 630 AERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRAR 689
++R+ PG++VGL WT GGE+ FVEA+ M G+G++ LTGQLGDV+KESA++A+ WVR+
Sbjct: 649 SQRLGQPGVAVGLAWTPMGGEIMFVEASQMDGEGKVTLTGQLGDVMKESAELAMNWVRSH 708
Query: 690 ATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMT 749
A L + E LL+ +DIHIHFPAGAV KDGPSAGVT+ T LVSLFS+K VR+D AMT
Sbjct: 709 AKRLGIEKE--KKLLEKKDIHIHFPAGAVGKDGPSAGVTIATVLVSLFSKKCVRSDVAMT 766
Query: 750 GEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRME 809
GE+TLRGLVLPVGG+K+K+LAAHR GI+R+I+P RN KDL+E+P + L ++LA ++
Sbjct: 767 GEITLRGLVLPVGGIKEKVLAAHRAGIRRIIMPYRNEKDLLEIPNNIRQELTVVLAHTLD 826
Query: 810 DVLEQAFEG 818
DV+++AF G
Sbjct: 827 DVIQEAFNG 835
>gi|303276735|ref|XP_003057661.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460318|gb|EEH57612.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 917
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/867 (47%), Positives = 543/867 (62%), Gaps = 80/867 (9%)
Query: 11 LFLKVSGVGGDSSERASKVQVGAS-------DGKNQQEVI--HWHNRGVAARALHLSRGV 61
L++ V V D+ A V GAS D ++ + + H H+ G AAR + ++RG
Sbjct: 61 LYVGVVPVRRDAPPSAGGVTSGASQLDAESFDAEDDADDVRAHLHDVGTAARIIQIARG- 119
Query: 62 EKPSGRV----------TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--- 108
++P + +Y ++LEG CRF + +LS+ + A + L+ +
Sbjct: 120 DRPGMKARSIHWSPYDRSYTLLLEGRCRFELNQLSSTSPFLVAHVRQLDSLSTSPFRDLG 179
Query: 109 --------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
D + ++ FK A L+ LE ++ R K +LE P H+LAD+FV
Sbjct: 180 GNGRDDGVTADDGELGDMAASFKENARALVDKLEHRKGAARRLKSMLEQAPPHRLADLFV 239
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A+FE SF+ +L +L + K R+ +A LV+ L + V +T+KVEG+L+K+Q+E+LL
Sbjct: 240 AAFEDSFDARLELLSTTCPKERMRRALALVEAQLHAATVNADVTKKVEGRLTKTQREYLL 299
Query: 221 RQQMRAIKEELGDNDDDE--DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGY 278
RQQM AI+EELG+ + DDL L K+ A P+ + K + ELR+L+KM Q P Y
Sbjct: 300 RQQMAAIREELGEGEGAGEEDDLEKLRAKLLDAAPPAEVLKTAEAELRKLRKMTEQAPAY 359
Query: 279 TSSRVYLELIADLPWEK-ASEEIDLDLKA---AKERLDSDHYGLVRVKQRIIEYLAVRKL 334
+R ++E +A LPW K A+ ++ ++ + A+ LD +HYGL RVK RIIEYLAVR+L
Sbjct: 360 GVTRGWIETVASLPWSKEAATDVTVEASSMADARAVLDEEHYGLDRVKDRIIEYLAVRRL 419
Query: 335 KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
+PDAR P+LCF GPPGVGKT+LA SIA L R F RISLGGV+DEAD+RGHRRTYI SMP
Sbjct: 420 RPDARPPILCFQGPPGVGKTTLARSIAKVLQRPFQRISLGGVRDEADVRGHRRTYIASMP 479
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
GRLI GLKRVGV +PVMLLDE+DK GSD RGDPA+A+LEVLDPEQN F DHY+ VPFDL
Sbjct: 480 GRLIQGLKRVGVRDPVMLLDELDKMGSDSRGDPAAAMLEVLDPEQNHAFTDHYMGVPFDL 539
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGL------ 508
S++ F+ATAN + IP PL DRME+I +PGYT EEKL IA RH++P+VL++HGL
Sbjct: 540 SRITFLATANDPRTIPGPLRDRMEMITVPGYTDEEKLAIACRHVVPKVLEEHGLLHAGRE 599
Query: 509 ------GSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPS 562
+ L+IP V+LV++ YTREAGVR L+R L +L RA AV VA E + A
Sbjct: 600 GNNRDANTPRLRIPRDAVELVVRSYTREAGVRGLQRCLESLCRAVAVSVA-HESDAAAAG 658
Query: 563 SKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP 622
S + SP A VIP G +T+ LV VLGP
Sbjct: 659 SANGDGGSSP-------PAALQGTHVIPRG-----ADGVPEVTTELV------RAVLGPA 700
Query: 623 RFD---DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESA 679
RFD D PG+ GL WT GG++ ++EA M G G L LTGQLGDVIKESA
Sbjct: 701 RFDSNNDDLKDHHGDIPGVVAGLSWTAVGGDLMYIEAAVMPGGGTLQLTGQLGDVIKESA 760
Query: 680 QIALTW------VRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTAL 733
IA++W + AT +A DG LL+GR +H+H P GA+PKDGPSAGVT+ TAL
Sbjct: 761 LIAMSWHGAGGKAESSATIKTHLAGDG--LLRGRSVHVHLPQGAIPKDGPSAGVTMCTAL 818
Query: 734 VSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV-EV 792
VSLFS + R+DTAMTGE++LRGLVLPVGGVK+K++AAH+ GI+RV++P RN+ D+ EV
Sbjct: 819 VSLFSDRPARSDTAMTGEVSLRGLVLPVGGVKEKLIAAHQNGIRRVLIPARNVVDVEHEV 878
Query: 793 PAAVLASLEIILAKRMEDVLEQAFEGG 819
PAA +LEI+ M DVLE AFEGG
Sbjct: 879 PAATREALEIVPCVTMADVLENAFEGG 905
>gi|320165742|gb|EFW42641.1| lon protease [Capsaspora owczarzaki ATCC 30864]
Length = 986
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/796 (48%), Positives = 514/796 (64%), Gaps = 61/796 (7%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G R + L+R K ++ Y ++LEG CRF V + + A+ LE+ Q
Sbjct: 220 GTIGRVVRLAR--IKVGSKMVYNLLLEGQCRFGVVAVRM-DPFMVAQACQLELV-FTPSQ 275
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFE 168
P + + +L+ +L + T +++ VP+ ++ D+ +A+ ++SF
Sbjct: 276 GALPPPTPGVEAMLYDSIRQLLKLLASRAPTLAGFDRIVDQVPLARIVDLLMANMDLSFV 335
Query: 169 EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQ---KVEGQL------SKSQKEFL 219
+++ L +++ +R +A L+ R + ++ A ++ + GQL +K K
Sbjct: 336 DRVSTLRELNVPLRFERALALIQRQVSRLQTALEVPAPRGSLVGQLVKMARNAKDGKTDD 395
Query: 220 LRQQMRAIKEELGDNDDDEDD--LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ +GD + D+DD + ALE ++++ +P + V +EL +LK++ PQ
Sbjct: 396 EGNNSSSTPPSIGDANKDQDDADVEALETRIKALNLPEEVAPVVMRELAKLKRLHPQSSE 455
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
YLE+IADLPW +E++ LDL+ A+ LD DH+GL +VK+RI+E LAVRKL+ D
Sbjct: 456 RQVYFSYLEVIADLPWNTLTEDV-LDLQKAQADLDHDHHGLAKVKKRILECLAVRKLRND 514
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP++C VGPPGVGKTSL SIAS LGRKF RI+LGG+ DEA+IRGHR TY+G+MPGR+
Sbjct: 515 MKGPIICLVGPPGVGKTSLGRSIASTLGRKFQRIALGGMHDEAEIRGHRLTYVGAMPGRV 574
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+ ++R G NPV+LLDEIDK G DVRGDPASALLEVLDPEQN F+DHYL+VPFDLSK
Sbjct: 575 MQAIRRSGSKNPVLLLDEIDKLGKDVRGDPASALLEVLDPEQNCQFSDHYLHVPFDLSKA 634
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+F+ TANR IP PLLDRMEVIELPGYT +EK IA RHLIP+ L +HGL + L IP
Sbjct: 635 LFICTANRMSSIPAPLLDRMEVIELPGYTLDEKAHIATRHLIPKQLKEHGLVPQNLDIPS 694
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+V+ +IQRYTREAGVRNLER +AA+ RA AV++ +
Sbjct: 695 DIVQTIIQRYTREAGVRNLEREIAAVCRATAVRIVQAST--------------------- 733
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
P +H S T + PLVVD+A+LE VLG P+FDD E ERV+ PG
Sbjct: 734 ----------TAPASVGSHPASPTDSV-QPLVVDDALLEDVLGAPKFDD-EIHERVSVPG 781
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL---- 693
++ GLVWT GG + FVEAT+M GKG L LTGQLGDVIKESAQIALTW++A AT L
Sbjct: 782 VATGLVWTANGGGILFVEATSMGGKGRLTLTGQLGDVIKESAQIALTWLKAHATALPPNS 841
Query: 694 ----QLVAEDGM----NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRAD 745
A+ G NLL+ DIH+HFPAGA+PKDGPSAG+TLVT +VSL S K VRAD
Sbjct: 842 PAVFPTSAQPGTAVVRNLLENTDIHVHFPAGAIPKDGPSAGITLVTVMVSLMSGKVVRAD 901
Query: 746 TAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILA 805
TAMTGE+TL GLVLPVGG+K+K++AAHR GIKRVILP RN KDL E+PA V +SL+I+L
Sbjct: 902 TAMTGEVTLSGLVLPVGGIKEKVIAAHRAGIKRVILPHRNSKDLAEIPATVKSSLDIVLV 961
Query: 806 KRMEDVLEQAFEGGCP 821
K +++VL+ AF+GG P
Sbjct: 962 KTVQEVLDAAFDGGSP 977
>gi|348503894|ref|XP_003439497.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Oreochromis
niloticus]
Length = 856
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/779 (48%), Positives = 514/779 (65%), Gaps = 44/779 (5%)
Query: 70 YIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQ-------DPDFIALSRQF 122
Y +++ GLCRFSV L + A + L+ ++E Q D + LS +F
Sbjct: 98 YTLLITGLCRFSVSSLLKERPFVLAEVKQLD--QLERYTTPQRDATATDDGELGELSEKF 155
Query: 123 KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
A++L+ +L+ + + LL+++P L D+ + S +E+L +LD++ L+ R
Sbjct: 156 YQAAVQLLGMLDMSVPVVAKFRRLLDSLPRETLPDVVASMIRTSNKEKLQVLDALSLEER 215
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM----RAIKEELGDNDDDE 238
KA ++ R ++ + K+ QK ++K L+R+ R + D DDD
Sbjct: 216 FKKALPMLTRQIEGL----KLLQKTRKMSPDNEKRVLVRKGTVFPGRQFNLDEEDEDDDG 271
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
DD ALERK+ A MP K KEL+RLKKM P Y +R YL+L+ +LPW K+++
Sbjct: 272 DDTAALERKVHGANMPEAALKICLKELKRLKKMPQSMPEYALTRNYLDLMVELPWSKSTK 331
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD++AA+ LD+DHY + ++K+R++EYLAVR+LK +GP+LCFVGPPGVGKTS+
Sbjct: 332 DC-LDIRAARTLLDNDHYAMDKLKRRVLEYLAVRQLKTSLKGPILCFVGPPGVGKTSVGR 390
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK
Sbjct: 391 SIARTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDK 450
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
G ++GDPA+ALLEVLDPEQN +F DHYLNV FDLS+V+F+ATAN IPP LLDRME
Sbjct: 451 LGKSLQGDPAAALLEVLDPEQNHSFTDHYLNVAFDLSQVLFIATANTTATIPPALLDRME 510
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
V+E+PGYT EEK+ IA RHLIP L+QHGL + L IP++ +I RYTREAGVR+LER
Sbjct: 511 VLEVPGYTQEEKVEIAHRHLIPNQLEQHGLTPQQLHIPQSTTPDIISRYTREAGVRSLER 570
Query: 539 NLAALARAAAVKVAE----QEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGES 594
+ A+ RA AVKVAE + E P + H G E E +
Sbjct: 571 KIGAICRAVAVKVAEGHTLTKTETLTPENSKQH-------------GGEAFSECFAVCLF 617
Query: 595 THEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFV 654
+ + + P+V+D L+ +LGPP F + E +ER+ PG+++GL WT GGE+ FV
Sbjct: 618 SDKAAPP---ELPIVIDHIALKDILGPPVF-EMEVSERLTLPGVALGLAWTPLGGEIMFV 673
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE-DGMNLLQGRDIHIHF 713
EA+ M G+G+L LTGQLGDV+KESA +A++W+RA A QL G + L+G DIH+HF
Sbjct: 674 EASRMEGEGQLTLTGQLGDVMKESAHLAISWLRANAKTYQLTNMVGGSDPLEGTDIHLHF 733
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
PAGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR
Sbjct: 734 PAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHR 793
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP----WRQHSKL 828
G+KRVILP+RN KDL E+PA V A+L+ I A + +VL +F+GG P R H +L
Sbjct: 794 AGVKRVILPKRNEKDLEELPANVRANLDFITATNLGEVLNASFDGGFPGVSGTRAHPQL 852
>gi|56693217|ref|NP_001008573.1| lon protease homolog 2, peroxisomal [Danio rerio]
gi|82232440|sp|Q5PQY6.1|LONP2_DANRE RecName: Full=Lon protease homolog 2, peroxisomal
gi|56269780|gb|AAH86968.1| Lon peptidase 2, peroxisomal [Danio rerio]
Length = 840
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/791 (47%), Positives = 526/791 (66%), Gaps = 38/791 (4%)
Query: 38 NQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARIS 97
+ E+ H+ G A A+ + G P + Y +++ GLCRF V +L + A +
Sbjct: 69 DSDELPSLHSIGTAGLAVQVV-GSNWP--KPHYTLLITGLCRFRVSQLLRERPFPVAEVE 125
Query: 98 SLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
L+ + E D + LS++F A++L+ +L+ + + LL+++P L D
Sbjct: 126 QLDKLEQYTEGDPADGELGELSQRFYQAAVQLVGMLDMSVPVVAKLRRLLDSLPKETLPD 185
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
+ A S +E+L +LD+VDL+ R KA L+ R ++ +++ +K T+K+ K +
Sbjct: 186 VLAAMIRTSNKEKLQVLDAVDLEERFKKALPLLTRQIEGLKLLQK-TRKLRPDDDK--RV 242
Query: 218 FLLRQ----QMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+R+ R + D+D DD LERK+++A MP + KELRRLKKM
Sbjct: 243 LSIRKGGVFPGRQFSLDEEVEDEDSDDTALLERKVKAAAMPEAALRVCLKELRRLKKMPQ 302
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
P Y +R YLE++ +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLAVR+
Sbjct: 303 SMPEYALTRNYLEMMVELPWSKSTTDC-LDIRAARVLLDNDHYAMEKLKKRVLEYLAVRQ 361
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
LK +GP+LCFVGPPGVGKTS+ SIA LGR+F RI+LGGV D++DIRGHRRTY+GSM
Sbjct: 362 LKSTLKGPILCFVGPPGVGKTSVGRSIARTLGREFHRIALGGVCDQSDIRGHRRTYVGSM 421
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN +F DHYLNVPFD
Sbjct: 422 PGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHSFTDHYLNVPFD 481
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS+V+F+ATAN IPP LLDRMEV+++PGYT EEK+ IA RHLIP L+QHGL + L
Sbjct: 482 LSQVLFIATANTTATIPPALLDRMEVLQVPGYTQEEKVEIAHRHLIPHQLEQHGLTPQQL 541
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
QIP+ +I +YTREAGVR+LER + A+ RA AVKVAE ++ + + H
Sbjct: 542 QIPQDTTLQIISKYTREAGVRSLERKIGAVCRAVAVKVAEGQKVSRSEAPTEQH--AEQN 599
Query: 574 LDNRLAD---GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAA 630
D+++ D A EM P+V+D L+ +LGPP F + E +
Sbjct: 600 TDSKVEDSGIAAPPEM--------------------PIVIDHVALKDILGPPLF-EMEVS 638
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARA 690
ER+ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R+ A
Sbjct: 639 ERLTLPGVAIGLAWTPMGGEIMFVEASRMEGEGQLTLTGQLGDVMKESAHLAISWLRSNA 698
Query: 691 TDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTG 750
L+ + +LL+G DIH+HFPAGAV KDGPSAGVT+VT L SL S + VR+D AMTG
Sbjct: 699 KTY-LLNDGSADLLEGTDIHLHFPAGAVTKDGPSAGVTIVTCLASLLSGRLVRSDVAMTG 757
Query: 751 EMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMED 810
E+TLRGLVLPVGG+KDK+LAAHR +KR+I+P+RN KDL E+PA V A L+ +LA +++
Sbjct: 758 EITLRGLVLPVGGIKDKVLAAHRANLKRIIIPKRNEKDLEEIPANVRADLDFVLAGTLDE 817
Query: 811 VLEQAFEGGCP 821
VL AF+GG P
Sbjct: 818 VLNAAFDGGFP 828
>gi|427788739|gb|JAA59821.1| Putative lon protease log 2 peroxisomal-like protein [Rhipicephalus
pulchellus]
Length = 836
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/796 (47%), Positives = 520/796 (65%), Gaps = 44/796 (5%)
Query: 35 DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTA 94
+ +++E HN G A + ++ G P R +Y +++ GLCRF + L Y
Sbjct: 63 NDSHEEETWSMHNLGTAGIVVQVT-GTNWP--RPSYTLLVTGLCRFRIDGLVQESPYLVG 119
Query: 95 RISSLEMT--KIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
+S L+ + +++ + D + L QF+ A +LI +L+ + R K LL +VPI
Sbjct: 120 NVSQLDKLPGEADLDMDDYDAELTELMNQFREQATKLIDMLDLSIPSIIRLKRLLASVPI 179
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI A + E+L +LD+VDL R K L+ R ++S++ + K +G S
Sbjct: 180 QSLPDICAAIVRATHAERLQVLDAVDLAERFKKTLPLLIRQIESLQFLHQ--AKKDGSTS 237
Query: 213 KS------QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELR 266
++ RQQ+ ++ ++ D++ LE+K+++A MP + K KEL+
Sbjct: 238 RAFHIEKVGSPHRPRQQLDIDDDDF----EEGDEVGLLEKKIKAAEMPDHARKVATKELQ 293
Query: 267 RLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRII 326
RLKKM P P + +R YLEL+ DLPW +S E+ +DL ++ LD+DHYG+ ++K+R++
Sbjct: 294 RLKKMPPHMPEHAMTRNYLELLIDLPWSHSSPEV-VDLAKSRSDLDADHYGMEKLKKRVL 352
Query: 327 EYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHR 386
EYLAVRKLK +GP+LCFVGPPGVGKTS+ SIA +LGR+F RISLGGV D+ADIRGHR
Sbjct: 353 EYLAVRKLKSSLKGPILCFVGPPGVGKTSVGRSIARSLGREFYRISLGGVSDQADIRGHR 412
Query: 387 RTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDH 446
RTYIGSMPGR+I GL+ VGV NPV LLDEIDK + GDPA+ALLEVLDPEQN F DH
Sbjct: 413 RTYIGSMPGRIIQGLRTVGVKNPVFLLDEIDKMTPGIHGDPAAALLEVLDPEQNCAFIDH 472
Query: 447 YLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQH 506
YLN+P+DLS V+F+ATAN IP LLDRMEVI +PGYT EEK IA HL+P+ L +H
Sbjct: 473 YLNIPYDLSSVLFIATANTVSTIPAALLDRMEVIPVPGYTHEEKEHIARNHLLPKQLKEH 532
Query: 507 GLGSEFLQIP-EAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKD 565
G+ ++ +Q+ EA+ KLVI +YTREAGVR LER + AL RA AVKV E E + +D
Sbjct: 533 GITTDMMQVTNEALRKLVI-KYTREAGVRTLERKIGALCRAVAVKVVENETICPVALQQD 591
Query: 566 VHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD 625
+L++ + V + V H S P+V+DE +E +LGPP++D
Sbjct: 592 -----------QLSNQSAVTVAV------AHPPS------LPIVIDEMAIEGILGPPQYD 628
Query: 626 DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTW 685
+E R+ PG++VGL WT GGE+ FVEA+ M G G+L LTGQLGDV+KESA++AL W
Sbjct: 629 -QEMDARLLQPGVAVGLAWTAAGGEIMFVEASRMEGDGQLVLTGQLGDVMKESAKLALNW 687
Query: 686 VRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRAD 745
+R A + + G +L++G D+HIHFPAGAV KDGPSAG+T+VT LVSLF+ + V D
Sbjct: 688 LRIHADKFHIPVQKGTDLMEGTDVHIHFPAGAVGKDGPSAGITIVTVLVSLFTGRTVLPD 747
Query: 746 TAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILA 805
AMTGE+TL+GLVLPVGG+KDK+LAAHR G+++VILP+RN KDL EVPA++ L
Sbjct: 748 VAMTGEITLQGLVLPVGGIKDKVLAAHRAGMRKVILPKRNKKDLQEVPASIKEDLSFCFV 807
Query: 806 KRMEDVLEQAFEGGCP 821
+ +VL++AFEGG P
Sbjct: 808 THIAEVLQEAFEGGFP 823
>gi|426242318|ref|XP_004015021.1| PREDICTED: lon protease homolog 2, peroxisomal [Ovis aries]
Length = 852
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/797 (47%), Positives = 526/797 (65%), Gaps = 35/797 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIIQVVKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 VAEVEQLDRLEEFPNTCKTREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKHKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELG-----DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + MR I G D D+D DD+V LE+K++++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPMRRITHVSGALADEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARVLLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE + +A
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHREA-------- 587
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPR 623
RL P A+G + ++ G+S + VS+T + P+++D L+ +LGPP
Sbjct: 588 RLDRP----DAAEGEGCKEHILEDGKS-NPVSDTTDLALPPEMPILIDFHALKDILGPPM 642
Query: 624 FDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIAL 683
+ + E +ER++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLG+V+KESA +A+
Sbjct: 643 Y-EMEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGNVMKESAHLAI 701
Query: 684 TWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
+W+R+ A L G +LL+ DIH+HFPAGAV KDGPSAGVT+ T L SLFS + V
Sbjct: 702 SWLRSNAKKYHLTNASGSFDLLENTDIHLHFPAGAVTKDGPSAGVTIATCLASLFSGRLV 761
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R+D AMTGE+TLRGLVLPVGG+KDK LAAHR G+KRVI+P+RN KDL E+PA V L
Sbjct: 762 RSDVAMTGEITLRGLVLPVGGIKDKALAAHRAGLKRVIIPQRNEKDLEEIPANVRQDLSF 821
Query: 803 ILAKRMEDVLEQAFEGG 819
I A +++VL AF+GG
Sbjct: 822 ITASCLDEVLNAAFDGG 838
>gi|77736391|ref|NP_001029895.1| lon protease homolog 2, peroxisomal [Bos taurus]
gi|122140100|sp|Q3SX23.1|LONP2_BOVIN RecName: Full=Lon protease homolog 2, peroxisomal; AltName:
Full=Lon protease-like protein 2; Short=Lon protease 2;
AltName: Full=Peroxisomal Lon protease
gi|74356440|gb|AAI04548.1| Lon peptidase 2, peroxisomal [Bos taurus]
gi|296478008|tpg|DAA20123.1| TPA: peroxisomal Lon protease homolog 2 [Bos taurus]
Length = 852
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/797 (47%), Positives = 524/797 (65%), Gaps = 35/797 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQITQVVREKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 VAEVEQLDRLEEFPNTCKTREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKHKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELG-----DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + MR I G D D+D DD+V LE+K++++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPMRRITHVPGALADEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARVLLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTASIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE + +A DV
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHREAKLDRPDV- 594
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPR 623
A+G + ++ G+S VS+T + P+++D L+ +LGPP
Sbjct: 595 -----------AEGEGCKEHLLEDGKS-DPVSDTTDLALPPEMPILIDFHALKDILGPPM 642
Query: 624 FDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIAL 683
+ + E +ER++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLG+V+KESA +A+
Sbjct: 643 Y-EMEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGNVMKESAHLAI 701
Query: 684 TWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
+W+R+ A L G +LL+ DIH+HFPAGAV KDGPSAGVT+ T L SLFS + V
Sbjct: 702 SWLRSNAKKYHLTNASGSFDLLENTDIHLHFPAGAVTKDGPSAGVTIATCLASLFSGRLV 761
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R+D AMTGE+TLRGLVLPVGG+KDK LAAHR G+KRVI+P+RN KDL E+PA V L
Sbjct: 762 RSDVAMTGEITLRGLVLPVGGIKDKALAAHRAGLKRVIIPQRNEKDLEEIPANVRQDLSF 821
Query: 803 ILAKRMEDVLEQAFEGG 819
I A +++VL AF+GG
Sbjct: 822 ITASCLDEVLNAAFDGG 838
>gi|153004960|ref|YP_001379285.1| ATP-dependent protease La [Anaeromyxobacter sp. Fw109-5]
gi|152028533|gb|ABS26301.1| ATP-dependent protease La [Anaeromyxobacter sp. Fw109-5]
Length = 828
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/802 (47%), Positives = 530/802 (66%), Gaps = 77/802 (9%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
+G + RA + GA+D ++ G AR + L + G Y +V++GL
Sbjct: 72 IGVVTQRRAEEEDPGAAD---------LYSVGTVARVVKLLK-----MGEDNYSLVVQGL 117
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
RF V EL Y AR+ +E + + D + AL+ K A E+I ++ +
Sbjct: 118 ARFKVLELVQESPYLKARVDP-----VEDKSITDDVEVEALAINLKKLAREVIELMPELP 172
Query: 138 KTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQ 195
L+E++ P H LAD+ A+ ++ EE+ +L++ DLK R+ EL++R +
Sbjct: 173 AAATE---LVESITHPGH-LADLIAANVDVPIEEKQQVLETTDLKSRMKLVLELLNRKRE 228
Query: 196 SIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPS 255
++++ KI V+G++SK+Q+E+ LRQQ++AIKEELG+ ++E++L L+ +++ AG+P
Sbjct: 229 ILKLSNKIDSAVKGEMSKTQREYYLRQQLKAIKEELGELGEEEEELDELQERLKKAGLPP 288
Query: 256 NIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDH 315
+ K QKEL RLK + YT +R YL+ IADLPW K S++ +LD++ A++ LD+DH
Sbjct: 289 EVEKVAQKELNRLKSIPTASSEYTVARTYLDWIADLPWSKKSDD-NLDIENARQILDADH 347
Query: 316 YGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGG 375
YGL ++K+RI+EYLAVRKLK D RGP+LCFVGPPGVGKTSL SIA ++GRKF+R+SLGG
Sbjct: 348 YGLDKIKKRILEYLAVRKLKNDMRGPILCFVGPPGVGKTSLGQSIARSIGRKFVRLSLGG 407
Query: 376 VKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVL 435
V+DEA+IRGHRRTY+G++PGR+I +K+ G NPVM+LDEIDK G+D RGDP++ALLEVL
Sbjct: 408 VRDEAEIRGHRRTYVGALPGRIIQSMKKAGTVNPVMMLDEIDKLGADFRGDPSAALLEVL 467
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN +F+DHYL++ +DLSKV+F+ TAN PIP PL DRME++ELPGYT EEK+ IA
Sbjct: 468 DPEQNHSFSDHYLDLAYDLSKVMFIGTANLLDPIPGPLKDRMEILELPGYTFEEKVHIAQ 527
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
HLIP+ L +HGL ++ + I E + +I YTREAGVRNLER +A + RA AV+VA
Sbjct: 528 NHLIPKQLREHGLSADAIAITEKALIKIIMAYTREAGVRNLERRIADVCRAVAVEVA--- 584
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
S + ++++ +
Sbjct: 585 -------------------------------------------SGKLQAGGKRAIEDSDV 601
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
E +LGP +F + E AER PG++ GL WT GG++ F+EAT M GKG L LTGQLGDV+
Sbjct: 602 ESMLGPEKFYN-ETAERTEIPGVATGLAWTAAGGDILFIEATKMTGKGSLTLTGQLGDVM 660
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
KESAQ AL+++R++A +L + + N L+ DIHIHFPAG++PKDGPSAGVT++TALVS
Sbjct: 661 KESAQAALSYLRSKADNLGIPS----NFLERTDIHIHFPAGSIPKDGPSAGVTILTALVS 716
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
L + RVR+D AMTGE+TLRGLVLPVGG+K+K+LAAHR GIKR+I+P RN +DLV+VP
Sbjct: 717 LLTGNRVRSDVAMTGEVTLRGLVLPVGGIKEKVLAAHRAGIKRIIIPARNERDLVDVPEQ 776
Query: 796 VLASLEIILAKRMEDVLEQAFE 817
LE + A M++VL+ A E
Sbjct: 777 ARKELEFVFAAHMDEVLKAALE 798
>gi|440894810|gb|ELR47161.1| Lon protease-like protein 2, peroxisomal, partial [Bos grunniens
mutus]
Length = 775
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/760 (48%), Positives = 508/760 (66%), Gaps = 29/760 (3%)
Query: 70 YIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMEL 129
Y +++ GLCRF + ++ Y A + L+ + + + LS QF A++L
Sbjct: 21 YTLLITGLCRFQIIQVVKEKPYPVAEVEQLDRLEEFPNTCKTREELGELSEQFYKYAVQL 80
Query: 130 ISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATEL 189
+ +L+ + + LL+++P L DI + S +E+L +LD+V L+ R L
Sbjct: 81 VEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPL 140
Query: 190 VDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG-----DNDDDEDDLVAL 244
+ R ++ + K+ QK K + + MR I G D D+D DD+V L
Sbjct: 141 LVRQIEGL----KLLQKTRKHKQDDDKRVIAIRPMRRITHVPGALADEDEDEDNDDIVML 196
Query: 245 ERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDL 304
E+K++++ MP K KE++RLKKM P Y +R YLEL+ +LPW K++ + LD+
Sbjct: 197 EKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDI 255
Query: 305 KAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASAL 364
+AA+ LD+DHY + ++K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A L
Sbjct: 256 RAARVLLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL 315
Query: 365 GRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVR 424
GR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++
Sbjct: 316 GREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQ 375
Query: 425 GDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPG 484
GDPA+ALLEVLDPEQN F DHYLNV FDLS+V+F+ATAN IPP LLDRME+I++PG
Sbjct: 376 GDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTASIPPALLDRMEIIQVPG 435
Query: 485 YTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALA 544
YT EEK+ IA RHLIP+ L+QHGL + +QIP+ +I RYTREAGVR+L+R L A+
Sbjct: 436 YTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAIC 495
Query: 545 RAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRI 604
RA AVKVAE + +A DV A+G + ++ G+S VS+T +
Sbjct: 496 RAVAVKVAEGQHREAKLDRPDV------------AEGEGCKEHLLEDGKSD-PVSDTTDL 542
Query: 605 T----SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
P+++D L+ +LGPP + + E +ER++ PG+++GL WT GGE+ FVEA+ M
Sbjct: 543 ALPPEMPILIDFHALKDILGPPMY-EMEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMD 601
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVP 719
G+G+L LTGQLG+V+KESA +A++W+R+ A L G +LL+ DIH+HFPAGAV
Sbjct: 602 GEGQLTLTGQLGNVMKESAHLAISWLRSNAKKYHLTNASGSFDLLENTDIHLHFPAGAVT 661
Query: 720 KDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRV 779
KDGPSAGVT+ T L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK LAAHR G+KRV
Sbjct: 662 KDGPSAGVTIATCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKALAAHRAGLKRV 721
Query: 780 ILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
I+P+RN KDL E+PA V L I A +++VL AF+GG
Sbjct: 722 IIPQRNEKDLEEIPANVRQDLSFITASCLDEVLNAAFDGG 761
>gi|291410225|ref|XP_002721390.1| PREDICTED: lon peptidase 2, peroxisomal [Oryctolagus cuniculus]
Length = 852
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/801 (46%), Positives = 519/801 (64%), Gaps = 32/801 (3%)
Query: 38 NQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARIS 97
+ Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y A +
Sbjct: 69 DTQDLPPLHRIGTAALAIQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYPIAEVE 125
Query: 98 SLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
L+ + + + LS QF A++L+ +L+ + + LL+++P L D
Sbjct: 126 QLDRLEEFPSTYKAREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPD 185
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
I + S +E+L +LD+V L+ R L+ R ++ + K+ QK K
Sbjct: 186 ILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQDDDKR 241
Query: 218 FLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQ 272
+ + +R I G D+D DD+V LE+K++++ MP K KE++RLKKM
Sbjct: 242 VVAIRPIRRITHIPGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMP 301
Query: 273 PQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVR 332
P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLAVR
Sbjct: 302 QSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLEYLAVR 360
Query: 333 KLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGS 392
+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GS
Sbjct: 361 QLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGS 420
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
MPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV F
Sbjct: 421 MPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAF 480
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L QHGL +
Sbjct: 481 DLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLAQHGLTPQQ 540
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSP 572
+QIP+A +I RYTREAGVR+L+R A+ RA AVKVAE + ++A D
Sbjct: 541 VQIPQATTLDIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKEAKLERPD------- 593
Query: 573 LLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDRE 628
G E E + VS+ + P+++D L+ +LGPP + + E
Sbjct: 594 ------GTGGEGCREHVLEDAEPESVSDAAELALPPEMPILIDFHALKDILGPPMY-EME 646
Query: 629 AAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRA 688
+ER++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R+
Sbjct: 647 VSERLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRS 706
Query: 689 RATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTA 747
A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D A
Sbjct: 707 NAKKYHLTNASGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVA 766
Query: 748 MTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKR 807
MTGE+TLRGLVLPVGG+KDK+LAAHR G+K++ILP+RN KDL E+P +V L +LA
Sbjct: 767 MTGEITLRGLVLPVGGIKDKVLAAHRAGLKQIILPQRNEKDLEEIPGSVRQGLSFVLASC 826
Query: 808 MEDVLEQAFEGGCPWRQHSKL 828
++DVL AF+GG P + L
Sbjct: 827 LDDVLNAAFDGGFPVKTRPGL 847
>gi|359319045|ref|XP_003638980.1| PREDICTED: lon protease homolog 2, peroxisomal-like isoform 1
[Canis lupus familiaris]
Length = 852
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/797 (47%), Positives = 520/797 (65%), Gaps = 35/797 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 VAEVEQLDRLEEFPNTCKTREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKHKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I G D+D DD+V LERK++++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPIRRITHIPGTLEDDDEDEDNDDIVMLERKIRTSSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE + ++A DV
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKEAKLDRYDV- 594
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPR 623
A+G E E I +S+T + P+++D L+ +LGPP
Sbjct: 595 -----------AEG-EGGREHILEDAKPESISDTTDLALPPEMPILIDFHALKDILGPPM 642
Query: 624 FDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIAL 683
+ + E +ER++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A+
Sbjct: 643 Y-EMEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAI 701
Query: 684 TWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
+W+R+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + V
Sbjct: 702 SWLRSNAKKYHLTNASGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLV 761
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+KRVI+P+RN KDL E+P V L
Sbjct: 762 RSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRVIIPQRNEKDLEEIPGNVRQDLSF 821
Query: 803 ILAKRMEDVLEQAFEGG 819
+ A +++VL AF+GG
Sbjct: 822 VTASCLDEVLNAAFDGG 838
>gi|410931020|ref|XP_003978894.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Takifugu
rubripes]
Length = 837
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/793 (47%), Positives = 512/793 (64%), Gaps = 33/793 (4%)
Query: 37 KNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI 96
++ E+ H G A A+ + G P + Y +++ GLCRF V L + A +
Sbjct: 67 QHTDELPALHKTGTAGLAVQVV-GSNWP--KPHYTLLITGLCRFKVSGLLQERPFVLAEV 123
Query: 97 SSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLA 156
L+ + + LS +F A +L+ +L+ + K LL+++P L
Sbjct: 124 EQLDKLDQYTAGTAPSGELVDLSDKFYQAAAQLVDMLDMSVPVVSKLKRLLDSLPRETLP 183
Query: 157 DIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQK 216
D+ + S +E+L +LD+VDL+ R ++ R ++++ + +K + +K
Sbjct: 184 DVVASMIRSSNKEKLQVLDAVDLEERFRTVLPMLTRQIEALNLLQKSRKLGPASAAKVGA 243
Query: 217 EFLLRQ-QMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQ 275
L + + + D D+D DD LERK+ +A MP K KEL+RLKKM P
Sbjct: 244 ALLGSGGPGQRFRHDGNDEDEDGDDTAVLERKVHAADMPEAALKVCLKELKRLKKMPPSM 303
Query: 276 PGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK 335
P Y +R YL+L+ DLPW +++++ LD+ AA+ LD DH+ L ++K+R++EYLAVR+LK
Sbjct: 304 PEYALTRNYLDLMVDLPWNRSTKD-QLDIGAARRLLDEDHFALDKLKRRVLEYLAVRQLK 362
Query: 336 PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPG 395
+GP+LCFVGPPGVGKTS+ SIA LGR+F RI+LGGV D++DIRGHRRTY+GS+PG
Sbjct: 363 TSLKGPILCFVGPPGVGKTSVGRSIARTLGREFHRIALGGVCDQSDIRGHRRTYVGSLPG 422
Query: 396 RLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 455
R+I+GLK GV NPV LLDE+DK G ++GDP +ALLEVLDPEQN +F DHYLNV FDLS
Sbjct: 423 RIINGLKTAGVNNPVFLLDEVDKLGKSLQGDPGAALLEVLDPEQNHSFTDHYLNVAFDLS 482
Query: 456 KVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI 515
+V+F+ATAN IPP LLDRMEV+++PGYT EE+++IA RHLIP L QHGL + L I
Sbjct: 483 QVLFIATANTVATIPPALLDRMEVLQVPGYTQEERVQIAHRHLIPNQLQQHGLTPQQLLI 542
Query: 516 PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLD 575
P+ + +I RYTREAGVR+LER +AA+ RA AVKVAE SS+ + + G
Sbjct: 543 PQDSTQQIISRYTREAGVRSLERKIAAICRAVAVKVAEGHGAPKELSSECLEQQGG---- 598
Query: 576 NRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAA 635
+ A EM P+VVD L +LGPP F D E +ER+
Sbjct: 599 --RSKAAPPEM--------------------PIVVDHMALSDILGPPMF-DMEVSERLTL 635
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
PG++VGL WT GGE+ FVEA+ M G G+L LTGQLGDV+KESA +A++W+R A QL
Sbjct: 636 PGVAVGLAWTPLGGELMFVEASRMEGDGQLTLTGQLGDVMKESAHLAISWLRTNAKRYQL 695
Query: 696 VAEDGM-NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTL 754
G + L+G DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TL
Sbjct: 696 TNLTGSPDPLEGTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITL 755
Query: 755 RGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQ 814
RGLVLPVGG+KDK+LAAHR G+K V+LP+RN KDL E+PA V A L+ ILA+ +++VL+
Sbjct: 756 RGLVLPVGGIKDKVLAAHRGGVKCVVLPKRNQKDLEELPANVRADLDFILAQNLDEVLDT 815
Query: 815 AFEGGCPWRQHSK 827
AFEGG P R S+
Sbjct: 816 AFEGGFPARGSSR 828
>gi|414590051|tpg|DAA40622.1| TPA: hypothetical protein ZEAMMB73_577771 [Zea mays]
Length = 431
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/436 (80%), Positives = 388/436 (88%), Gaps = 5/436 (1%)
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
MPGRLIDGLKRV V NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK FNDHYLNVPF
Sbjct: 1 MPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKAFNDHYLNVPF 60
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLSKVIFVATAN+ QPIPPPLLDRMEVIELPGYTPEEKL+IAM+HLIPRVL+QHGL +
Sbjct: 61 DLSKVIFVATANKMQPIPPPLLDRMEVIELPGYTPEEKLKIAMKHLIPRVLEQHGLSTAN 120
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSP 572
LQIPEAMVKL+I+RYTREAGVRNLERNLAALARAAAVKVAEQ + L K++ + +
Sbjct: 121 LQIPEAMVKLIIERYTREAGVRNLERNLAALARAAAVKVAEQVKTLRL--GKEIQPITTT 178
Query: 573 LLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAER 632
LLD+RLADG EVEMEVIPMG H++SNT+ SP+ VDEAMLEKVLGPPRFDD EAA+R
Sbjct: 179 LLDSRLADGGEVEMEVIPMG---HDMSNTYENPSPMTVDEAMLEKVLGPPRFDDTEAADR 235
Query: 633 VAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATD 692
VA+PG+SVGLVWT+ GGEVQFVEATAM GKG+LHLTGQLGDVIKESAQ+ALTWVRARA D
Sbjct: 236 VASPGVSVGLVWTSVGGEVQFVEATAMVGKGDLHLTGQLGDVIKESAQLALTWVRARAAD 295
Query: 693 LQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEM 752
L L +NLL+ RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFS ++VRADTAMTGEM
Sbjct: 296 LNLSPASDINLLESRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSNRKVRADTAMTGEM 355
Query: 753 TLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
TLRG+VLPVGGVKDK+LAAHRYGIKRVIL ERN+KDL EVP+ +L+ +EI+L K +EDVL
Sbjct: 356 TLRGIVLPVGGVKDKVLAAHRYGIKRVILRERNMKDLSEVPSPILSGMEILLVKHIEDVL 415
Query: 813 EQAFEGGCPWRQHSKL 828
+ AFEGGCP + SKL
Sbjct: 416 DHAFEGGCPLKSRSKL 431
>gi|355699585|gb|AES01178.1| lon peptidase 2, peroxisomal [Mustela putorius furo]
Length = 851
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/797 (46%), Positives = 520/797 (65%), Gaps = 35/797 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q + H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QALPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 VAEVEQLDRLEEFPNTCKTREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKHKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELG-----DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I G D D+D DD+V LERK++++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPIRRITHIPGALEDDDEDEDNDDIVMLERKIRTSSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE + ++A DV
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKEAKLDHSDV- 594
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPR 623
A+G ++ + +S+T + P+++D L+ +LGPP
Sbjct: 595 -----------AEGEGCREHILEEAKP-ESISDTPDLALPPEMPILIDFHALKDILGPPM 642
Query: 624 FDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIAL 683
+ + E +ER++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A+
Sbjct: 643 Y-EMEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAI 701
Query: 684 TWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
+W+R+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + V
Sbjct: 702 SWLRSNAKKYHLTNASGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLV 761
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+KRVI+P+RN KDL E+P V L
Sbjct: 762 RSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRVIIPQRNEKDLEEIPGNVRQDLSF 821
Query: 803 ILAKRMEDVLEQAFEGG 819
+ A +++VL AF+GG
Sbjct: 822 VTASCLDEVLNAAFDGG 838
>gi|410983469|ref|XP_003998061.1| PREDICTED: lon protease homolog 2, peroxisomal [Felis catus]
Length = 852
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/794 (46%), Positives = 521/794 (65%), Gaps = 29/794 (3%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 VAEVEQLDRLEEFPNTCKTREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKHKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELG-----DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I G D D+D DD+V LE+K++++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPIRRITHIPGALEDEDEDEDHDDIVMLEKKIRTSSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE + ++A DV
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKEAKLDHSDVA 595
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSN-TFRITSPLVVDEAMLEKVLGPPRFDD 626
G ++ L D ES ++ ++ P+++D L+ +LGPP + +
Sbjct: 596 E-GEGCKEHILEDAKP---------ESINDATDLALPPEMPILIDFHALKDILGPPMY-E 644
Query: 627 REAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWV 686
E +ER++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+
Sbjct: 645 MEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWL 704
Query: 687 RARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRAD 745
R+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D
Sbjct: 705 RSNAKKYHLTNASGNFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSD 764
Query: 746 TAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILA 805
AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P+RN KDL E+P V L + A
Sbjct: 765 VAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPQRNEKDLEEIPGNVRQDLSFVTA 824
Query: 806 KRMEDVLEQAFEGG 819
+++VL AF+GG
Sbjct: 825 SCLDEVLNAAFDGG 838
>gi|194208569|ref|XP_001914749.1| PREDICTED: LOW QUALITY PROTEIN: lon protease homolog 2, peroxisomal
[Equus caballus]
Length = 825
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/794 (46%), Positives = 516/794 (64%), Gaps = 29/794 (3%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 40 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 93
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 94 VAEVEQLDRLEEFPNTCKTREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 153
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 154 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKHKQ 209
Query: 213 KSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I G D+D DD+V LE+K++++ MP K KE++R
Sbjct: 210 DDDKRVIAIRPVRRITHIPGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKR 269
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 270 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLE 328
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 329 YLAVRQLKNTLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 388
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 389 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 448
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 449 LNVAFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 508
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE + ++A DV
Sbjct: 509 LTPQQIQIPQLTTLDIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKEAKLERSDVT 568
Query: 568 RLGSPLLDNRLADGA-EVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDD 626
+G E +E + G + P+++D L+ +LGPP + +
Sbjct: 569 E----------GEGCKEHILEDVKPGSISDTTDLALPPEMPILIDFHALKDILGPPMY-E 617
Query: 627 REAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWV 686
E +ER++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+
Sbjct: 618 MEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWL 677
Query: 687 RARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRAD 745
R+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D
Sbjct: 678 RSNAKKYHLTNASGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSD 737
Query: 746 TAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILA 805
AMTGE+TLRGLVLPVGG+KDK+LAAHR G+KRVILP+RN KDL E+P V L + A
Sbjct: 738 VAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRVILPQRNEKDLEEIPGNVRQDLSFVTA 797
Query: 806 KRMEDVLEQAFEGG 819
+++VL AF+GG
Sbjct: 798 SCLDEVLNAAFDGG 811
>gi|310821709|ref|YP_003954067.1| ATP-dependent protease la 2 [Stigmatella aurantiaca DW4/3-1]
gi|309394781|gb|ADO72240.1| ATP-dependent protease La 2 [Stigmatella aurantiaca DW4/3-1]
Length = 835
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/802 (48%), Positives = 522/802 (65%), Gaps = 80/802 (9%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
+G + RA + GASD + G AR + L + G Y +V++GL
Sbjct: 72 IGVVTQRRAEEEDPGASD---------LYTMGTVARIVKLLK-----MGEDNYSLVVQGL 117
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
RF V EL Y AR+ ++E K E VE + AL K A E+I ++ +
Sbjct: 118 ARFRVLELVQEAPYLKARVDAVE-DKTSAENVEVE----ALGINLKKLAREVIELMPELP 172
Query: 138 KTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQ 195
L+E++ P H LAD+ A+ ++ EE+ +L++VDLK R+ EL++R +
Sbjct: 173 AAATE---LVESITHPGH-LADLIAANVDVPIEEKQAVLETVDLKARMKLVLELLNRKRE 228
Query: 196 SIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPS 255
++++ KI V+G++SK+Q+E+ LRQQ++AIKEELG+ ++E++L L+ +++ AG+P
Sbjct: 229 ILKLSNKIDSAVKGEMSKTQREYYLRQQLKAIKEELGEMGEEEEELDELQERLKKAGLPP 288
Query: 256 NIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDH 315
++ K QKEL RLK + YT +R YL+ IADLPW K SE+ +LD++ A++ LD DH
Sbjct: 289 DVEKVAQKELNRLKTIPAASSEYTVARTYLDWIADLPWSKISED-NLDIENARQVLDKDH 347
Query: 316 YGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGG 375
YG+ +VK+RI+EYLAVRKLK D RGP+LC VGPPGVGKTSL S+A A GRKF+R+SLGG
Sbjct: 348 YGIKKVKKRILEYLAVRKLKNDMRGPILCLVGPPGVGKTSLGQSVARATGRKFVRLSLGG 407
Query: 376 VKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVL 435
V+DEA+IRGHRRTY+G++PGR I +K+ G+ NPVM+LDEIDK G+D RGDP++ALLEVL
Sbjct: 408 VRDEAEIRGHRRTYVGALPGRFIQSMKKSGMKNPVMMLDEIDKLGADFRGDPSAALLEVL 467
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN TF+DHYL+VPFDLSKV+F+ATAN+ PIP PL DRME+IEL GYT EEK IA
Sbjct: 468 DPEQNNTFSDHYLDVPFDLSKVMFIATANQLDPIPGPLRDRMEIIELTGYTFEEKQSIAR 527
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
HL+P+ L +HGL ++ + + + + + YTREAGVRNLER +A L RA AV+VA
Sbjct: 528 IHLVPKQLKEHGLSTDHIDVTDEALLTLTTSYTREAGVRNLERRIADLCRAVAVEVA--- 584
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
G + E + I GE E
Sbjct: 585 -------------------------GGKTEKQTI-NGERVKE------------------ 600
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
+LGP F E AER PG++ GL WT GG++ F+EAT M GKG + LTGQLGDV+
Sbjct: 601 --ILGPETFYS-EVAERTEVPGVATGLAWTAAGGDLLFIEATKMAGKGGMTLTGQLGDVM 657
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
KESA AL+++R++A L + N L+ D+H+HFPAG++PKDGPSAGVT++TAL S
Sbjct: 658 KESATAALSYLRSKAEALGISP----NFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTS 713
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
L + RVR+DTAMTGE TLRGLVLPVGG+K+K+LAAHR GIKRVILPER KDLV+VP
Sbjct: 714 LMTGIRVRSDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLVDVPEQ 773
Query: 796 VLASLEIILAKRMEDVLEQAFE 817
LE I M++VL+ A E
Sbjct: 774 AKKELEFIFVTHMDEVLKAALE 795
>gi|383455918|ref|YP_005369907.1| ATP-dependent protease La [Corallococcus coralloides DSM 2259]
gi|380733241|gb|AFE09243.1| ATP-dependent protease La [Corallococcus coralloides DSM 2259]
Length = 819
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/813 (47%), Positives = 528/813 (64%), Gaps = 81/813 (9%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
+G + RA + GASD + G AR + L + G Y +V++GL
Sbjct: 72 IGVVTQRRAEEEDPGASD---------LYTMGTVARIVKLLK-----MGEDNYSLVVQGL 117
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
RF V EL Y AR+ ++E K E VE + AL K A E+I ++ +
Sbjct: 118 ARFRVMELVQEAPYLKARVDAVE-DKTSSENVEVE----ALGINLKKLAREVIELMPELP 172
Query: 138 KTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQ 195
L+E++ P H LAD+ A+ ++ EE+ +L++VDLK R+ EL++R +
Sbjct: 173 AAATE---LVESITHPGH-LADLIAANVDVPIEEKQAVLETVDLKARMKLVLELLNRKRE 228
Query: 196 SIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPS 255
++++ KI V+G++SK+Q+E+ LRQQ++AIKEELG+ ++E++L L+ +++ A +P
Sbjct: 229 ILKLSNKIDSAVKGEMSKTQREYYLRQQLKAIKEELGEMGEEEEELDELQERLKKAALPP 288
Query: 256 NIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDH 315
+ K QKEL RLK + YT +R YL+ IADLPW K SE+ +LD++ A+++LD DH
Sbjct: 289 EVEKVAQKELNRLKTIPAASSEYTVARTYLDWIADLPWSKVSED-NLDIENARQQLDKDH 347
Query: 316 YGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGG 375
+G+ +VK+RI+EYLAVRKLK D RGP+LC VGPPGVGKTSL S+A A GRKF+R+SLGG
Sbjct: 348 FGIKKVKKRILEYLAVRKLKNDMRGPILCLVGPPGVGKTSLGQSVAKATGRKFVRLSLGG 407
Query: 376 VKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVL 435
V+DEA+IRGHRRTY+G++PGR I +K+ G NPVM+LDEIDK G+D RGDP++ALLEVL
Sbjct: 408 VRDEAEIRGHRRTYVGALPGRFIQSMKKAGTKNPVMMLDEIDKLGADFRGDPSAALLEVL 467
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN TF+DHYL+V FDLSKV+FVATAN+ PIP PL DRME+IEL GYT EEK IA
Sbjct: 468 DPEQNSTFSDHYLDVAFDLSKVMFVATANQLDPIPGPLRDRMEIIELTGYTFEEKQAIAR 527
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
HL+P+ L +HGL + +++ + + ++ YTREAGVRNLER +A + RA AV+VA
Sbjct: 528 IHLVPKQLKEHGLNGDHIEVQDDALLILTTSYTREAGVRNLERRIADICRAVAVEVA--- 584
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
G + E + I N R+
Sbjct: 585 -------------------------GGKTEKQTI----------NAERV----------- 598
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
+++LGP F E AER PG++ GL WT GG++ F+EAT M GKG + LTGQLGDV+
Sbjct: 599 KEILGPETFYS-EVAERTEVPGVATGLAWTAAGGDLLFIEATKMAGKGGMTLTGQLGDVM 657
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
KESA AL+++R++A L + N L+ DIH+HFPAG++PKDGPSAGVT++TAL S
Sbjct: 658 KESATAALSYLRSKAESLGI----NPNFLEKTDIHLHFPAGSIPKDGPSAGVTILTALTS 713
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
L + RVR DTAMTGE TLRGLVLPVGG+K+K+LAAHR GIKRVILPER KDL++VP
Sbjct: 714 LLTGIRVRHDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLIDVPDQ 773
Query: 796 VLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
LE I A +M++VL A E P+++ + +
Sbjct: 774 AKNELEFIFATKMDEVLSAALE-TSPFKEGAAI 805
>gi|327276409|ref|XP_003222962.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Anolis
carolinensis]
Length = 852
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/784 (46%), Positives = 512/784 (65%), Gaps = 32/784 (4%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G AA A+ + G P T +V GLCRF + +L Y A + L+ +
Sbjct: 77 HRIGTAALAIQVV-GSNWPKPHYTLLVT--GLCRFQILQLVKEKPYPVAEVEQLDRLEQF 133
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
+ + + LS Q A++L+ +L+ + + LL+ +P L DI +
Sbjct: 134 TNKSTSEEELGELSDQLYKYAVQLVEMLDMSIPAVAKLRRLLDNLPREALPDILTSIIRT 193
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
S +E+L +LD+V L+ R L+ R ++ + K+ QK K + + +R
Sbjct: 194 SNQEKLQILDAVGLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQDDDKRVIAIRPIR 249
Query: 226 AIKEELG-----DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+ G + D+D DD+V LE+K++++ MP K KE++RLKKM P Y
Sbjct: 250 RLAHIPGALEEEEEDEDHDDIVILEKKIRTSSMPEQALKVCVKEVKRLKKMPQSMPEYAL 309
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
+R YLEL+ +LPW K++++ LD++AA+ LD+DHY + ++K+R++EYLAVR+LK + +G
Sbjct: 310 TRNYLELMVELPWSKSTKDC-LDIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKG 368
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+G
Sbjct: 369 PILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIING 428
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
LK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN +F DHYLNV FDLS+V+F+
Sbjct: 429 LKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHSFTDHYLNVAFDLSQVLFI 488
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
ATAN IPP LLDRME+I++PGYT EEKL IA RHLIP+ L+QHGL + +QIP+
Sbjct: 489 ATANTTATIPPALLDRMEIIQVPGYTQEEKLEIAHRHLIPKQLEQHGLTPQQIQIPQDTT 548
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I RYTREAGVR+L+R A+ RA AVKVAE + ++ P +V +
Sbjct: 549 LAIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKETKPDRSEV------------TE 596
Query: 581 GAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAAP 636
G E E I +S+T + P+++D L+ +LGPP + + E +ER++ P
Sbjct: 597 GGECR-EHIAEDAKPDSISDTADLALPPEMPILIDFHALKDILGPPMY-ELEVSERLSQP 654
Query: 637 GISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLV 696
G+++GL WT GGE+ FVEA+ M G+G+L LTGQLGD++KESA +A++W+R+ A L
Sbjct: 655 GVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDIMKESAHLAISWLRSNAKKYHLT 714
Query: 697 AEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLR
Sbjct: 715 NASGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLR 774
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
GLVLPVGG+KDK+LAAHR G+KR+I+P+RN KDL E+ V L ++ +++VL A
Sbjct: 775 GLVLPVGGIKDKVLAAHRAGLKRIIIPQRNEKDLEEIAVNVRQDLNFVMTSCLDEVLNAA 834
Query: 816 FEGG 819
FEGG
Sbjct: 835 FEGG 838
>gi|13385298|ref|NP_080103.1| lon protease homolog 2, peroxisomal isoform 1 [Mus musculus]
gi|81906099|sp|Q9DBN5.1|LONP2_MOUSE RecName: Full=Lon protease homolog 2, peroxisomal; AltName:
Full=Lon protease-like protein 2; Short=Lon protease 2;
AltName: Full=Peroxisomal Lon protease
gi|12836332|dbj|BAB23609.1| unnamed protein product [Mus musculus]
gi|26340950|dbj|BAC34137.1| unnamed protein product [Mus musculus]
gi|29144996|gb|AAH49090.1| Lon peptidase 2, peroxisomal [Mus musculus]
gi|74185272|dbj|BAE30113.1| unnamed protein product [Mus musculus]
gi|148679079|gb|EDL11026.1| RIKEN cDNA 1300002A08, isoform CRA_a [Mus musculus]
Length = 852
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/803 (45%), Positives = 522/803 (65%), Gaps = 32/803 (3%)
Query: 36 GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR 95
+ Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y A
Sbjct: 67 ASDTQDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYPVAE 123
Query: 96 ISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKL 155
+ L+ + + + LS QF A++L+ +L+ + + LL+ +P L
Sbjct: 124 VEQLDRLEEFPNICKSREELGELSEQFYRYAVQLVEMLDMSVPAVAKLRRLLDNLPREAL 183
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 184 PDILTSIIRTSNKEKLQILDAVSLEDRFKMTIPLLVRQIEGL----KLLQKTRKPKQDDD 239
Query: 216 KEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKK 270
K + + +R I G ++D DD+V LE+K++++ MP K KE++RLKK
Sbjct: 240 KRVIAIRPIRRIPHIPGTLEDEEEEEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKK 299
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
M P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLA
Sbjct: 300 MPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKRRVLEYLA 358
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
VR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+
Sbjct: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYV 418
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV
Sbjct: 419 GSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNV 478
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL
Sbjct: 479 AFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTP 538
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
+ +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE + ++A DV
Sbjct: 539 QQIQIPQHTTLAIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKEAKLDRSDV---- 594
Query: 571 SPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDD 626
ADG + V+ + +S+T + P+++D L+ +LGPP + +
Sbjct: 595 --------ADGEGCKEHVLEDAKP-ESISDTADLALPPEMPILIDSHALKDILGPPLY-E 644
Query: 627 REAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWV 686
E +ER++ PG+++GL WT GG++ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+
Sbjct: 645 LEVSERLSQPGVAIGLAWTPLGGKIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWL 704
Query: 687 RARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRAD 745
R+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D
Sbjct: 705 RSNAKKYHLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSD 764
Query: 746 TAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILA 805
AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K++I+P+RN KDL E+P+ V L + A
Sbjct: 765 VAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQIIIPQRNEKDLEEIPSNVRQDLSFVTA 824
Query: 806 KRMEDVLEQAFEGGCPWRQHSKL 828
+++VL AF+GG P + L
Sbjct: 825 SCLDEVLNAAFDGGFPVKTRPGL 847
>gi|348567384|ref|XP_003469479.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Cavia
porcellus]
Length = 852
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/798 (47%), Positives = 521/798 (65%), Gaps = 37/798 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 VAEVEQLDRLEEFPNTCQSREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQ 236
Query: 213 KSQKEFLLRQQMRAIKE-----ELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I E D D++ DD+V LE+K++++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPIRRIAHIPSTLEDEDEDEENDDIVMLEKKIRASSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARVLLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IPP LLDRME+I +PGY+ EEKL IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTATIPPALLDRMEIIPVPGYSQEEKLEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE + + A DV
Sbjct: 536 LTPQQIQIPQVTTLTIISRYTREAGVRSLDRKLGAICRAVAVKVAEGQSKDAKLDRADV- 594
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHE-VSNTFRIT----SPLVVDEAMLEKVLGPP 622
A G VI ++ HE VS+ + P+V+D L+ +LGPP
Sbjct: 595 -----------AAGEGCREHVI--EDTKHESVSDATDLALPPEMPIVIDSHALKDILGPP 641
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
+ + E +ER++ PG+++GL WT GG++ FVEA+ M G G+L LTGQLGDV+KESA +A
Sbjct: 642 MY-EMEVSERLSQPGVAIGLAWTPLGGKIMFVEASRMDGDGQLTLTGQLGDVMKESAHLA 700
Query: 683 LTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
++W+R+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS +
Sbjct: 701 ISWLRSNAKRFHLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRL 760
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+KR+I+P+RN KDL E+P+ V L
Sbjct: 761 VRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRIIIPQRNEKDLEELPSNVRQDLS 820
Query: 802 IILAKRMEDVLEQAFEGG 819
+ A +++VL AF+GG
Sbjct: 821 FVPASCLDEVLNAAFDGG 838
>gi|432862337|ref|XP_004069805.1| PREDICTED: lon protease homolog 2, peroxisomal-like isoform 2
[Oryzias latipes]
Length = 836
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/798 (47%), Positives = 523/798 (65%), Gaps = 48/798 (6%)
Query: 37 KNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI 96
++ +E+ H G A A+ + G P + Y +++ GLCRF V L + A +
Sbjct: 68 QDTEELPTLHTIGTAGIAVQVV-GSNWP--KPHYTLLITGLCRFRVSGLLKERPFVLAEV 124
Query: 97 SSLEMTKIEMEQVE---------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLL 147
L+ +EQ D + LS++F A++L+ +L+ + + LL
Sbjct: 125 EQLD----NLEQYTTSTTEGTTADDGELGELSQKFHQAAVQLLGMLDMSVPAVAKFRRLL 180
Query: 148 ETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKV 207
+++P L D+ + S +E+L +LD+V L+ R + ++ R ++ +++ +K +
Sbjct: 181 DSLPREMLPDVVASMIRTSNKEKLQVLDAVSLEERFRRTLPMLTRQIEGLKLLKKSRKMT 240
Query: 208 EGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
G + F RQ E+ +DDD DD +LE+K+ A MP K KEL+R
Sbjct: 241 PGNEKRVCGPFPGRQFSLDRDED---SDDDGDDTASLEKKVHGANMPEAALKVSLKELKR 297
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YL+L+ +LPW +++++ LD++AA+ LD+DHY + ++K+R++E
Sbjct: 298 LKKMPQSMPEYALTRNYLDLMVELPWSRSTKDC-LDIRAARVLLDNDHYAMEKLKRRVLE 356
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK +GP+LCFVGPPGVGKTS+ SIA LGR+F RI+LGGV D++DIRGHRR
Sbjct: 357 YLAVRQLKTSLKGPILCFVGPPGVGKTSVGRSIAKTLGREFHRIALGGVCDQSDIRGHRR 416
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN +F DHY
Sbjct: 417 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHSFTDHY 476
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IPP LLDRMEV+++PGYT EEK+ IA RHLIP L+QHG
Sbjct: 477 LNVAFDLSQVLFIATANTTATIPPALLDRMEVLQVPGYTQEEKVEIAHRHLIPNQLEQHG 536
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + L IP+ + +I RYTREAGVR+LER + A+ RA AVKVAE + LP +
Sbjct: 537 LTPQQLHIPQESTQDIICRYTREAGVRSLERKIGAICRAVAVKVAEGHR---LPETDASS 593
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDR 627
SP +++ A EM P+V+D+ L+ +LGPP F +
Sbjct: 594 LETSPQQEDK---AAPPEM--------------------PIVIDQMALKDILGPPLF-EL 629
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E +ER+ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R
Sbjct: 630 EVSERLTLPGVALGLAWTPLGGEIMFVEASRMEGEGQLTLTGQLGDVMKESAHLAISWLR 689
Query: 688 ARATDLQLVAEDGM-NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADT 746
A A QL G + L+G DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D
Sbjct: 690 ANAKTYQLTNMVGAPDPLEGTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDI 749
Query: 747 AMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAK 806
AMTGE+TLRGLVLPVGG+KDK+LAAHR G+KRVILP+RN KDL E+PA V A L+ + A
Sbjct: 750 AMTGEITLRGLVLPVGGIKDKVLAAHRAGVKRVILPKRNEKDLEELPANVRAQLDFVTAG 809
Query: 807 RMEDVLEQAFEGGCPWRQ 824
+++VL +F+GG P Q
Sbjct: 810 NLDEVLNASFDGGFPGAQ 827
>gi|74222955|dbj|BAE40624.1| unnamed protein product [Mus musculus]
gi|74223258|dbj|BAE40762.1| unnamed protein product [Mus musculus]
Length = 852
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/803 (45%), Positives = 521/803 (64%), Gaps = 32/803 (3%)
Query: 36 GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR 95
+ Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y A
Sbjct: 67 ASDTQDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYPVAE 123
Query: 96 ISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKL 155
+ L+ + + + LS QF A++L+ +L+ + + LL+ +P L
Sbjct: 124 VEQLDRLEEFPNICKSREELGELSEQFYRYAVQLVEMLDMSVPAVAKLRRLLDNLPREAL 183
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 184 PDILTSIIRTSNKEKLQILDAVSLEDRFKMTIPLLVRQIEGL----KLLQKTRKPKQDDD 239
Query: 216 KEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKK 270
K + + +R I G ++D DD+V LE+K++++ MP K KE++RLKK
Sbjct: 240 KRVIAIRPIRRIPHIPGTLEDEEEEEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKK 299
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
M P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + +K+R++EYLA
Sbjct: 300 MPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEELKRRVLEYLA 358
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
VR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+
Sbjct: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYV 418
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV
Sbjct: 419 GSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNV 478
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL
Sbjct: 479 AFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTP 538
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
+ +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE + ++A DV
Sbjct: 539 QQIQIPQHTTLAIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKEAKLDRSDV---- 594
Query: 571 SPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDD 626
ADG + V+ + +S+T + P+++D L+ +LGPP + +
Sbjct: 595 --------ADGEGCKEHVLEDAKP-ESISDTADLALPPEMPILIDSHALKDILGPPLY-E 644
Query: 627 REAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWV 686
E +ER++ PG+++GL WT GG++ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+
Sbjct: 645 LEVSERLSQPGVAIGLAWTPLGGKIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWL 704
Query: 687 RARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRAD 745
R+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D
Sbjct: 705 RSNAKKYHLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSD 764
Query: 746 TAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILA 805
AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K++I+P+RN KDL E+P+ V L + A
Sbjct: 765 VAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQIIIPQRNEKDLEEIPSNVRQDLSFVTA 824
Query: 806 KRMEDVLEQAFEGGCPWRQHSKL 828
+++VL AF+GG P + L
Sbjct: 825 SCLDEVLNAAFDGGFPVKTRPGL 847
>gi|395505911|ref|XP_003757280.1| PREDICTED: lon protease homolog 2, peroxisomal [Sarcophilus
harrisii]
Length = 808
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/795 (46%), Positives = 522/795 (65%), Gaps = 41/795 (5%)
Query: 42 VIHWHNR-----GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI 96
V+H H+ G AA A+ + G P + Y +++ GLCRF + ++ Y A +
Sbjct: 24 VVHLHDIVEKQIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVVKEKPYPVAEV 80
Query: 97 SSLEMTKIEMEQVEQDPDFIA-LSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKL 155
L+ + E P+ + LS QF A++L+ +L+ + + LL+++P L
Sbjct: 81 EQLDRLE-EFPSPSNAPEELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREAL 139
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 140 PDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKHKQDDD 195
Query: 216 KEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKK 270
K + + +R I G D+D DD+V LE+K++++ MP K KE++RLKK
Sbjct: 196 KRVIAIRPIRRITHIPGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKK 255
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
M P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLA
Sbjct: 256 MPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMDKLKKRVLEYLA 314
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
VR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+
Sbjct: 315 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYV 374
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV
Sbjct: 375 GSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNV 434
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL
Sbjct: 435 AFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTP 494
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDVHRL 569
+ +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE Q ++ L S+
Sbjct: 495 QQIQIPQVTTLDIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKDTKLERSEGTEGE 554
Query: 570 GSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFD 625
G L + A+ E +S+T + P+++D L+ +LGPP +
Sbjct: 555 GC---REHLLEDAKPE-----------SISDTADLALPPEMPILIDFHALKDILGPPMY- 599
Query: 626 DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTW 685
+ E +ER++ PG+++GLVW+ GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W
Sbjct: 600 EMEVSERLSQPGVAIGLVWSPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISW 659
Query: 686 VRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRA 744
+R+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+
Sbjct: 660 LRSNAKKYHLTNASGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRS 719
Query: 745 DTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIIL 804
D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+KR+I+P+RN KDL E+P+ + L I
Sbjct: 720 DVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRIIIPQRNEKDLEEIPSNIRQDLTFIT 779
Query: 805 AKRMEDVLEQAFEGG 819
A +++VL AF+GG
Sbjct: 780 ATCLDEVLNAAFDGG 794
>gi|148233360|ref|NP_001089948.1| lon protease homolog 2, peroxisomal [Xenopus laevis]
gi|123896305|sp|Q2TAF8.1|LONP2_XENLA RecName: Full=Lon protease homolog 2, peroxisomal
gi|83405644|gb|AAI10948.1| MGC132158 protein [Xenopus laevis]
Length = 856
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/800 (47%), Positives = 519/800 (64%), Gaps = 44/800 (5%)
Query: 38 NQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARIS 97
+++E+ H G AA A+ + G P + Y +++ GLCRF + E+ Y A +
Sbjct: 69 DREELPSLHRIGTAALAVQVV-GSNWP--KPHYTLLVTGLCRFQITEILKERPYPVAEVE 125
Query: 98 SLEMTKIEMEQVEQDPDFIA----LSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIH 153
L+ +EQ+ +F LS QF A++L+ +L+ + K LL +P
Sbjct: 126 QLD----RLEQLSSKEEFKEALGDLSEQFYKYAVQLVDMLDNSVPAVAKLKRLLNNLPKE 181
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
L D+ + + EE+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 182 LLPDVLTSIIRTTNEEKLQILDAVSLEERFKVTIPLLLRQIEGL----KLLQKTRNPKQD 237
Query: 214 SQKEFLLRQQMRAIK---------EELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
K + + R + E D+D+D DD++ LERK++S+ MP K KE
Sbjct: 238 DDKRIVAIRPPRKLGNISSKSFSLENTDDDDEDSDDIIILERKIKSSNMPEPALKVCVKE 297
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
++RLKKM P Y +R YLEL+++LPW K + + LD++AA+ LD+DHY + ++K+R
Sbjct: 298 IKRLKKMPQSMPEYALTRNYLELMSELPWSKTTRD-RLDIRAARILLDNDHYAMAKLKKR 356
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
++EYLAVR+LK + +GP+LCFVGPPGVGKTS+ SIA LGR+F RI+LGGV D++DIRG
Sbjct: 357 VLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSIAKTLGREFHRIALGGVCDQSDIRG 416
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F
Sbjct: 417 HRRTYVGSMPGRIINGLKIVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFT 476
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYLNV FDLS+V+F+ATAN IPP LLDRMEV+E+PGY+ EEKL IA RHLI + L
Sbjct: 477 DHYLNVAFDLSQVLFIATANTTATIPPALLDRMEVLEVPGYSQEEKLEIAHRHLISKQLA 536
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
QHGL E +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE + + K
Sbjct: 537 QHGLTPEQIQIPQEATLEIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHRE----HK 592
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLG 620
H L +P +G E E +P G + +++T P+++D L+ +LG
Sbjct: 593 SEH-LEAP-------EGEE-RKESVPEGSKSATINDTADFALPPEMPILIDHHALKDILG 643
Query: 621 PPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQ 680
PP ++ E R+ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA
Sbjct: 644 PPMYET-EVFGRLNQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAH 702
Query: 681 IALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSR 739
+A++W+R+ A QL G +LL DIH+HFPAGAV KDGPSAGV +VT L SLFS
Sbjct: 703 LAISWLRSNAKKYQLTNASGSFDLLDNTDIHLHFPAGAVTKDGPSAGVAIVTCLASLFSG 762
Query: 740 KRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLAS 799
+ V +D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+KRVILP+RN DL E+P V
Sbjct: 763 RLVCSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRVILPKRNETDLEEIPLNVRQD 822
Query: 800 LEIILAKRMEDVLEQAFEGG 819
LE +LA +++VL AF+GG
Sbjct: 823 LEFVLAGSLDEVLNAAFDGG 842
>gi|291190900|ref|NP_001167070.1| peroxisomal Lon protease homolog 2 [Salmo salar]
gi|223647948|gb|ACN10732.1| Peroxisomal Lon protease homolog 2 [Salmo salar]
Length = 863
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/770 (48%), Positives = 512/770 (66%), Gaps = 37/770 (4%)
Query: 70 YIVVLEGLCRFSVQELSTRGTYYTARISSLE-----MTKIEM-EQVEQDPDFIALSRQFK 123
Y +++ GLCRF V +L G + A + L+ + EM E + + LS++F
Sbjct: 98 YTLLITGLCRFRVAQLLKEGPFPVAEVEQLDKLEQYTSPEEMSEAAGPEGELGELSQRFY 157
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
A++L+ +L+ + + LL+++P L D+ + S +E+L +LD+V L+ R
Sbjct: 158 QAAVQLVGMLDMSVPVVAKLRRLLDSLPRETLPDVLASMIHTSNKEKLQVLDAVSLEERF 217
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKS----QKEFLLRQQMRAIKEELGDNDDDED 239
K L+ R ++ +++ +K T+K+ +K +K +L ++ EE +D+D D
Sbjct: 218 KKTLPLLTRQIEGLKLLQK-TRKLRPDDNKRVLAVRKGGVLPGHQFSLDEEG--DDEDGD 274
Query: 240 DLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEE 299
D LERK++ A MP + KEL+RLKKM P Y +R YL+L+ +LPW K++ +
Sbjct: 275 DTAVLERKVKGANMPEPALRVCLKELKRLKKMPQSMPEYALTRNYLDLMVELPWSKSTTD 334
Query: 300 IDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASS 359
LD+ AA+ LDSDHY + ++K+R++EYLAVR+LK +GP+LCFVGPPGVGKTS+ S
Sbjct: 335 C-LDIHAARVLLDSDHYAMEKLKRRVLEYLAVRQLKSTLKGPILCFVGPPGVGKTSVGRS 393
Query: 360 IASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKT 419
IA LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK
Sbjct: 394 IARTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKL 453
Query: 420 GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEV 479
G ++GDPASALLEVLDPEQN +F DHYLNV FDLS+V+F+ATAN IPP LLDRMEV
Sbjct: 454 GKSLQGDPASALLEVLDPEQNHSFTDHYLNVAFDLSQVLFIATANSTATIPPALLDRMEV 513
Query: 480 IELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERN 539
+++ GYT EEK+ IA RHLIP L+QHGL + LQIP+ + +I +YTREAGVR+LER
Sbjct: 514 LQVQGYTQEEKVEIAHRHLIPHQLEQHGLTPQQLQIPQDTTQDIISKYTREAGVRSLERK 573
Query: 540 LAALARAAAVKVAEQE---QEQALPSSKDV----HRLGSPLLDNRLADGAEVEMEVIPMG 592
+ A+ RA AVKVAE + +A P+ H G DG +M P
Sbjct: 574 IGAICRAVAVKVAEGHNVTKSEAAPAESAPQGAEHGEGKRGRRGEEPDGVSADMAAPP-- 631
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
P+V+D L+ +LGP F + E +ER+ PG++VGL WT GGE+
Sbjct: 632 ------------DMPIVIDHIALKDILGPHVF-EMEVSERLTLPGVAVGLAWTPLGGEIM 678
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE-DGMNLLQGRDIHI 711
FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R+ A QL G + L+G DIH+
Sbjct: 679 FVEASRMEGEGQLTLTGQLGDVMKESAHLAMSWLRSNAKTYQLTNMVGGSDPLEGTDIHL 738
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
HFPAGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAA
Sbjct: 739 HFPAGAVTKDGPSAGVTMVTVLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAA 798
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
HR G+KRVI+P+RN KDL E+PA V L+ + A +++VL AF+GG P
Sbjct: 799 HRAGVKRVIIPKRNEKDLEEIPANVRVELDFVTASNLDEVLNAAFDGGFP 848
>gi|86158132|ref|YP_464917.1| ATP-dependent protease La [Anaeromyxobacter dehalogenans 2CP-C]
gi|123497699|sp|Q2IIK1.1|LON_ANADE RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|85774643|gb|ABC81480.1| ATP-dependent protease La [Anaeromyxobacter dehalogenans 2CP-C]
Length = 843
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/802 (47%), Positives = 526/802 (65%), Gaps = 77/802 (9%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
+G + RA + GA+D + G AR + L + G Y +V++GL
Sbjct: 81 IGVVTQRRAEEEDPGAAD---------LYTVGTVARVVKLLK-----MGEDNYSLVVQGL 126
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
RF V EL Y ARI + +E V D + AL+ K A E+I ++ +
Sbjct: 127 ARFKVLELVQESPYLKARIEA-----VEDRSVVDDVEVEALAINLKKLAREVIELMPELP 181
Query: 138 KTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQ 195
L+E++ P H LAD+ A+ ++ EE+ +L++V+LK R+ EL++R +
Sbjct: 182 AAATE---LVESITHPGH-LADLIAANVDVPIEEKQQVLETVELKARMKLVLELLNRKRE 237
Query: 196 SIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPS 255
++++ KI V+G++SK+Q+E+ LRQQ++AIKEELG+ ++E++L L+ +++ AG+P
Sbjct: 238 ILKLSNKIDSAVKGEMSKTQREYYLRQQLKAIKEELGELGEEEEELDELQERLKKAGLPP 297
Query: 256 NIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDH 315
+ K QKEL RLK + YT +R YL+ IADLPW K +++ +LD++ A++ LD+DH
Sbjct: 298 EVEKVAQKELNRLKSIPTASSEYTVARTYLDWIADLPWTKRTDD-NLDIENARQILDTDH 356
Query: 316 YGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGG 375
YGL ++K+RI+EYLAVRKLK D RGP+LCFVGPPGVGKTSL SIA A GRKF+R+SLGG
Sbjct: 357 YGLDKIKKRILEYLAVRKLKNDMRGPILCFVGPPGVGKTSLGQSIARATGRKFVRLSLGG 416
Query: 376 VKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVL 435
V+DEA+IRGHRRTY+G++PGR+I +K+ NPVM+LDEIDK G+D RGDP++ALLEVL
Sbjct: 417 VRDEAEIRGHRRTYVGALPGRIIQSMKKAATVNPVMMLDEIDKLGADFRGDPSAALLEVL 476
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN F+DHYL++ +DLSKV+F+ TAN PIP PL DRME++ELPGYT EEK+ IA
Sbjct: 477 DPEQNHAFSDHYLDLSYDLSKVMFIGTANLLDPIPGPLKDRMEILELPGYTFEEKVHIAQ 536
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
HLIP+ L +HGL ++ + I E + +I YTREAGVRNLER +A + RA AV+VA
Sbjct: 537 NHLIPKQLREHGLSADAIAISEKALIKIIMAYTREAGVRNLERRIADVCRAIAVEVA--- 593
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
S ++ ++EA +
Sbjct: 594 -------------------------------------------SGKIGASAKRSIEEADV 610
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
++LGP +F + E AER G++ GL WT GG++ F+EAT M GKG L LTGQLGDV+
Sbjct: 611 LEILGPEKFYN-ETAERTEIAGVATGLAWTAAGGDILFIEATKMPGKGALTLTGQLGDVM 669
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
KESAQ AL+++R+++ L + +N L+ D+HIHFPAGA+PKDGPSAGVT++TALVS
Sbjct: 670 KESAQAALSYLRSKSDSLGI----PVNFLEKTDLHIHFPAGAIPKDGPSAGVTILTALVS 725
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
L + RVR+D AMTGE+TLRGLVLPVGG+K+K+LAAHR GIKR+I+P RN KDL++VP
Sbjct: 726 LLTGIRVRSDVAMTGEVTLRGLVLPVGGIKEKVLAAHRAGIKRIIIPARNEKDLLDVPEQ 785
Query: 796 VLASLEIILAKRMEDVLEQAFE 817
LE + A M++VL+ A E
Sbjct: 786 ARKELEFVFAAHMDEVLQAALE 807
>gi|108763822|ref|YP_632173.1| ATP-dependent protease La [Myxococcus xanthus DK 1622]
gi|547861|sp|P36774.3|LON2_MYXXA RecName: Full=Lon protease 2; AltName: Full=ATP-dependent protease
La 2
gi|309546|gb|AAA72018.1| ATP-dependent protease [Myxococcus xanthus]
gi|435451|dbj|BAA02491.1| ATP-dependent protease La [Myxococcus xanthus DZF1]
gi|108467702|gb|ABF92887.1| ATP-dependent protease La [Myxococcus xanthus DK 1622]
Length = 827
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/802 (47%), Positives = 521/802 (64%), Gaps = 80/802 (9%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
+G + RA + GA+D + G AR + L + G Y +V++GL
Sbjct: 72 IGVVTQRRAEEEDPGAAD---------LYTMGTVARIVKLLK-----MGEDNYSLVVQGL 117
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
RF V EL Y AR+ ++E K E VE + AL K A E+I ++ +
Sbjct: 118 ARFRVVELVQEAPYLKARVDAVE-DKTSSENVEVE----ALGINLKKLAREVIELMPELP 172
Query: 138 KTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQ 195
L+E++ P H LAD+ A+ ++ EE+ +L++VDLK R+ EL++R +
Sbjct: 173 AAATE---LVESITHPGH-LADLIAANVDVPIEEKQAVLETVDLKARMKLVLELLNRKRE 228
Query: 196 SIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPS 255
++++ KI V+G++SK+Q+E+ LRQQ++AIKEELG+ ++E++L L+ +++ AG+P
Sbjct: 229 ILKLSNKIDSAVKGEMSKTQREYYLRQQLKAIKEELGEMGEEEEELDELQERLKKAGLPP 288
Query: 256 NIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDH 315
++ K KEL RLK + YT +R YL+ IADLPW K SE+ +LD++ A+++LD DH
Sbjct: 289 DVEKVANKELNRLKTIPAASSEYTVARTYLDWIADLPWAKISED-NLDIENARQQLDKDH 347
Query: 316 YGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGG 375
+G+ +VK+RI+EYLAVRKLK D RGP+LC VGPPGVGKTSL S+A A GRKF+R+SLGG
Sbjct: 348 FGIKKVKKRILEYLAVRKLKNDMRGPILCLVGPPGVGKTSLGQSVAKATGRKFVRLSLGG 407
Query: 376 VKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVL 435
V+DEA+IRGHRRTY+G++PGR I +K+ G NPVM+LDEIDK G+D RGDP++ALLEVL
Sbjct: 408 VRDEAEIRGHRRTYVGALPGRFIQSMKKAGTKNPVMMLDEIDKLGADFRGDPSAALLEVL 467
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN TF+DHYL+VPFDLSKV+FVATAN+ PIP PL DRME+IEL GYT EEK IA
Sbjct: 468 DPEQNNTFSDHYLDVPFDLSKVMFVATANQLDPIPGPLRDRMEIIELTGYTFEEKQSIAR 527
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
HL+P+ L +HGL + + I + + + YTREAGVRNLER +A + RA AV+VA
Sbjct: 528 IHLVPKQLKEHGLSPDHIDITDEALLTLTTAYTREAGVRNLERRIADICRAVAVEVA--- 584
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
G + E + I N R+
Sbjct: 585 -------------------------GGKTEKQTI----------NADRV----------- 598
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
+++LGP F E AER PG++ GL WT GG++ F+EAT M GKG + LTGQLGDV+
Sbjct: 599 KEILGPEMFYS-EVAERTEVPGVATGLAWTAAGGDLLFIEATKMAGKGGMTLTGQLGDVM 657
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
KESA AL+++R++A L + N L+ D+H+HFPAG++PKDGPSAGVT++TAL S
Sbjct: 658 KESATAALSYLRSKAEQLGISP----NFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTS 713
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
L + RVR DTAMTGE TLRGLVLPVGG+K+K+LAAHR GIKRVILPER KDL++VP
Sbjct: 714 LLTGIRVRHDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLIDVPDQ 773
Query: 796 VLASLEIILAKRMEDVLEQAFE 817
LE I M+DVL+ A E
Sbjct: 774 ARNELEFIFVTHMDDVLKAALE 795
>gi|147648011|sp|Q3MIB4.2|LONP2_RAT RecName: Full=Lon protease homolog 2, peroxisomal; AltName:
Full=Lon protease-like protein 2; Short=Lon protease 2;
AltName: Full=Peroxisomal Lon protease
gi|149032633|gb|EDL87503.1| rCG44284, isoform CRA_b [Rattus norvegicus]
gi|183986513|gb|AAI66411.1| Lonp2 protein [Rattus norvegicus]
Length = 852
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/793 (46%), Positives = 519/793 (65%), Gaps = 30/793 (3%)
Query: 36 GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR 95
+ Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y A
Sbjct: 67 ASDSQDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYPVAE 123
Query: 96 ISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKL 155
+ L+ + + + LS QF +++L+ +L+ + + LL+++P L
Sbjct: 124 VEQLDRLEEFPNTCKTREELGELSEQFYRYSVQLVEMLDMSVPAVAKLRRLLDSLPREAL 183
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 184 PDILTSIIRTSNKEKLQILDAVSLEDRFKMTIPLLVRQIEGL----KLLQKTRKPKQDDD 239
Query: 216 KEFLLRQQMRAIKEELG-----DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKK 270
K + + +R I G + ++D DD+V LE+K++++ MP K KE++RLKK
Sbjct: 240 KRVIAIRPIRRITHIPGALEDEEEEEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKK 299
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
M P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLA
Sbjct: 300 MPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKRRVLEYLA 358
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
VR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+
Sbjct: 359 VRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYV 418
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV
Sbjct: 419 GSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNV 478
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL
Sbjct: 479 AFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTP 538
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
+ +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE + ++A DV
Sbjct: 539 QQIQIPQLTTLAIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKEAKLDRSDV---- 594
Query: 571 SPLLDNRLADGAEVEMEVI--PMGESTHEVSN-TFRITSPLVVDEAMLEKVLGPPRFDDR 627
ADG + V+ ES + ++ P+++D L+ +LGPP + +
Sbjct: 595 --------ADGEGCKEHVLEDAKPESIGDAADLALPPEMPILIDSHALKDILGPPLY-EL 645
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E +ER++ PG+++GL WT GG++ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R
Sbjct: 646 EVSERLSQPGVAIGLAWTPLGGKIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLR 705
Query: 688 ARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADT 746
+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D
Sbjct: 706 SNAKKYHLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDV 765
Query: 747 AMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAK 806
AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K +I+P+RN KDL E+P+ V L + A
Sbjct: 766 AMTGEITLRGLVLPVGGIKDKVLAAHRAGLKHIIIPQRNEKDLEEIPSNVKQDLSFVTAS 825
Query: 807 RMEDVLEQAFEGG 819
+++VL AF+GG
Sbjct: 826 CLDEVLNAAFDGG 838
>gi|355756758|gb|EHH60366.1| Lon protease-like protein 2, peroxisomal [Macaca fascicularis]
gi|380783059|gb|AFE63405.1| lon protease homolog 2, peroxisomal [Macaca mulatta]
gi|383422055|gb|AFH34241.1| lon protease homolog 2, peroxisomal [Macaca mulatta]
gi|384940144|gb|AFI33677.1| lon protease homolog 2, peroxisomal [Macaca mulatta]
Length = 852
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/798 (46%), Positives = 517/798 (64%), Gaps = 37/798 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 IAEVEQLDRLEEFPSTCKMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I G D+D DD+V LE+K+Q++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIQTSSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDV 566
L + +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE Q +E L S
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVT 595
Query: 567 HRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPP 622
R G E I E +S+T + P+++D L+ +LGPP
Sbjct: 596 EREGC--------------REHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPP 641
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
+ + E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A
Sbjct: 642 MY-EMEVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLA 700
Query: 683 LTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
++W+R+ A QL G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS +
Sbjct: 701 ISWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRL 760
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L
Sbjct: 761 VRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLS 820
Query: 802 IILAKRMEDVLEQAFEGG 819
+ A +++VL AF+GG
Sbjct: 821 FVTASCLDEVLNAAFDGG 838
>gi|444913959|ref|ZP_21234105.1| ATP-dependent protease La Type I [Cystobacter fuscus DSM 2262]
gi|444715257|gb|ELW56128.1| ATP-dependent protease La Type I [Cystobacter fuscus DSM 2262]
Length = 820
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/809 (47%), Positives = 527/809 (65%), Gaps = 81/809 (10%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
+G + RA + GASD + G AR + L + G Y +V++GL
Sbjct: 73 IGVVTQRRAEEEDPGASD---------LYTMGTVARIVKLLK-----MGEDNYSLVVQGL 118
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
RF V +L Y AR+ ++E + E VE + AL K A E+I ++ +
Sbjct: 119 ARFRVLDLVQEAPYLKARVDAVE-DRTASENVEVE----ALGINLKKLAREVIELMPELP 173
Query: 138 KTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQ 195
L+E++ P H LAD+ A+ ++ EE+ +L++VDLK R++ EL++R +
Sbjct: 174 AAATE---LVESITHPGH-LADLIAANVDVPIEEKQAVLETVDLKARMNLVLELLNRKRE 229
Query: 196 SIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPS 255
++++ KI V+G++SK+Q+E+ LRQQ++AIKEELG+ ++E++L L+ +++ AG+P
Sbjct: 230 ILKLSNKIDSAVKGEMSKTQREYYLRQQLKAIKEELGEMGEEEEELDELQERLKKAGLPP 289
Query: 256 NIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDH 315
++ K KEL RLK + YT +R YL+ IADLPW K SE+ +LD++ A++ LD DH
Sbjct: 290 DVEKVANKELNRLKTIPAASSEYTVARTYLDWIADLPWAKMSED-NLDIENARQTLDKDH 348
Query: 316 YGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGG 375
+G+ +VK+RI+EYLAVRKLK D RGP+LC VGPPGVGKTSL SIA A+GRKF+R+SLGG
Sbjct: 349 FGIKKVKKRILEYLAVRKLKNDMRGPILCLVGPPGVGKTSLGQSIAKAVGRKFVRLSLGG 408
Query: 376 VKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVL 435
V+DEA+IRGHRRTY+G++PGR I +K+ G+ NPVM+LDEIDK G+D RGDP++ALLEVL
Sbjct: 409 VRDEAEIRGHRRTYVGALPGRFIQSMKKAGMKNPVMMLDEIDKLGADFRGDPSAALLEVL 468
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN TF+DHYL+V FDLSKV+F+ATAN+ PIP PL DRME+IEL GYT EEK IA
Sbjct: 469 DPEQNSTFSDHYLDVAFDLSKVMFIATANQLDPIPGPLRDRMEIIELTGYTFEEKQSIAR 528
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
HL+P+ L +HGL + + I + + ++ YTREAGVRNLER +A + RA AV+VA +
Sbjct: 529 IHLVPKQLKEHGLTPDHITITDEALLILTTAYTREAGVRNLERRIADICRAVAVEVAGGK 588
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
E+ + DG V
Sbjct: 589 TEK------------------QNVDGNRV------------------------------- 599
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
+++LGP F E AER PG+S GL WT GG++ F+EAT M GKG + LTGQLGDV+
Sbjct: 600 KEILGPEMFYS-EVAERTEVPGVSTGLAWTAAGGDLLFIEATKMAGKGGMTLTGQLGDVM 658
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
KESA AL+++R++A L + N L+ D+H+HFPAG++PKDGPSAGVT++TAL S
Sbjct: 659 KESATAALSYLRSKAESLGI----NPNFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTS 714
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
L + RVR DTAMTGE TLRGLVLPVGG+K+K+LAAHR GIKRVILPER KDL +VP
Sbjct: 715 LLTGIRVRGDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLQDVPEQ 774
Query: 796 VLASLEIILAKRMEDVLEQAFEGGCPWRQ 824
+E I A RM++VLE A E P+++
Sbjct: 775 ARNEIEFIFATRMDEVLEAALE-KSPFKE 802
>gi|417404955|gb|JAA49208.1| Putative lon protease log 2 peroxisomal [Desmodus rotundus]
Length = 850
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/797 (46%), Positives = 516/797 (64%), Gaps = 36/797 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 VAEVEQLDRLEEFPHSGRTREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ K
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLHKTRKHKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + R I G ++D DD+V LE+K++++ MP K KE+RR
Sbjct: 237 DEDKRVIAIRPTRRILPLPGTLEDEEEEEDNDDIVMLEKKIRTSHMPEQAHKVCVKEIRR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LDSDHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARALLDSDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK D +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNDLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK V V NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVAVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHL+P+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLVPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE + ++A
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEA-------- 587
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRI----TSPLVVDEAMLEKVLGPPR 623
LD A AE E + + ++ T + P+++D L+ +LGPP
Sbjct: 588 -----KLDRADATEAEGCREHV-LDTKPESINGTADLGLPPEMPILIDFHALKDILGPPM 641
Query: 624 FDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIAL 683
+ + E +ER++ PG+++GL W+ GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A+
Sbjct: 642 Y-EMEVSERLSQPGVAIGLAWSPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAI 700
Query: 684 TWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
+W+R+ A L G +LL D+H+HFPAGAV KDGPSAGVT+VT L SLFS + V
Sbjct: 701 SWLRSNAKKYHLTNASGSFDLLDNTDVHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLV 760
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+KRVI+P+RN KDL E+P V L
Sbjct: 761 RSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRVIIPQRNEKDLEEIPGNVRQDLSF 820
Query: 803 ILAKRMEDVLEQAFEGG 819
+ A ++DVL AF+GG
Sbjct: 821 VTASCLDDVLNAAFDGG 837
>gi|296231027|ref|XP_002760969.1| PREDICTED: lon protease homolog 2, peroxisomal [Callithrix jacchus]
Length = 852
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/797 (46%), Positives = 518/797 (64%), Gaps = 35/797 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I G D+D DD+V LE+K++++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPIRRITHIPGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE + ++A DV
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEVQPKEAKLERSDVA 595
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPR 623
EV E I E +S+T + P+++D L+ +LGPP
Sbjct: 596 E-------------REVCREHILEDEKPESISDTADLALPPEMPILIDFHALKDILGPPM 642
Query: 624 FDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIAL 683
+ + E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A+
Sbjct: 643 Y-EMEVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAI 701
Query: 684 TWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
+W+R+ A QL G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + V
Sbjct: 702 SWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLV 761
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL VP V L
Sbjct: 762 RSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGVPGNVRQDLSF 821
Query: 803 ILAKRMEDVLEQAFEGG 819
+ A +++VL AF+GG
Sbjct: 822 VTASCLDEVLNAAFDGG 838
>gi|197122546|ref|YP_002134497.1| ATP-dependent protease La [Anaeromyxobacter sp. K]
gi|196172395|gb|ACG73368.1| ATP-dependent protease La [Anaeromyxobacter sp. K]
Length = 835
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/802 (47%), Positives = 523/802 (65%), Gaps = 77/802 (9%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
+G + RA + GA+D + G AR + L + G Y +V++GL
Sbjct: 73 IGVVTQRRAEEEDPGAAD---------LYTVGTVARVVKLLK-----MGEDNYSLVVQGL 118
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
RF V EL Y ARI +E V D + AL+ K A E+I ++ +
Sbjct: 119 ARFKVLELVQESPYLKARIEP-----VEDRSVVDDVEVEALAINLKKLAREVIELMPELP 173
Query: 138 KTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQ 195
L+E++ P H LAD+ A+ ++ EE+ +L++V+LK R+ EL++R +
Sbjct: 174 AAATE---LVESITHPGH-LADLIAANVDVPIEEKQQVLETVELKARMKLVLELLNRKRE 229
Query: 196 SIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPS 255
++++ KI V+G++SK+Q+E+ LRQQ++AIKEELG+ ++E++L L+ +++ AG+P
Sbjct: 230 ILKLSNKIDSAVKGEMSKTQREYYLRQQLKAIKEELGELGEEEEELDELQERLKKAGLPP 289
Query: 256 NIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDH 315
+ K QKEL RLK + YT +R YL+ IADLPW K +++ +LD++ A++ LDSDH
Sbjct: 290 EVEKVAQKELNRLKSIPTASSEYTVARTYLDWIADLPWAKRTDD-NLDIENARQILDSDH 348
Query: 316 YGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGG 375
Y L ++K+RI+EYLAVRKLK D RGP+LCFVGPPGVGKTSL SIA A GRKF+R+SLGG
Sbjct: 349 YALEKIKKRILEYLAVRKLKNDMRGPILCFVGPPGVGKTSLGQSIARATGRKFVRLSLGG 408
Query: 376 VKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVL 435
V+DEA+IRGHRRTY+G++PGR+I +K+ G NPVM+LDEIDK G+D RGDP++ALLEVL
Sbjct: 409 VRDEAEIRGHRRTYVGALPGRIIQSMKKAGTVNPVMMLDEIDKLGADFRGDPSAALLEVL 468
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN F+DHYL++ +DLSKV+F+ TAN PIP PL DRME++ELPGYT EEK+ IA
Sbjct: 469 DPEQNHAFSDHYLDLSYDLSKVMFIGTANLLDPIPGPLKDRMEILELPGYTFEEKVHIAQ 528
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
HLIP+ L +HGL ++ + I E + +I YTREAGVRNLER +A + RA AV+VA
Sbjct: 529 NHLIPKQLKEHGLSADAIAITEKALIKIIMAYTREAGVRNLERRIADVCRAIAVEVA--- 585
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
S + ++EA +
Sbjct: 586 -------------------------------------------SGKIGAAAKRAIEEADV 602
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
++LGP +F + E AER G++ GL WT GG++ F+EAT M GKG L LTGQLGDV+
Sbjct: 603 LEILGPEKFYN-ETAERTEIAGVATGLAWTAAGGDILFIEATKMPGKGALTLTGQLGDVM 661
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
KESAQ AL+++R+++ L + +N L+ D+HIHFPAGA+PKDGPSAGVT++TALVS
Sbjct: 662 KESAQAALSYLRSKSDSLGI----PVNFLEKTDLHIHFPAGAIPKDGPSAGVTILTALVS 717
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
L + RVR+D AMTGE+TLRGLVLPVGG+K+K+LAAHR GIKR+I+P RN KDL++VP
Sbjct: 718 LLTGIRVRSDVAMTGEVTLRGLVLPVGGIKEKVLAAHRAGIKRIIIPARNEKDLLDVPEQ 777
Query: 796 VLASLEIILAKRMEDVLEQAFE 817
+E + A M++VL A E
Sbjct: 778 ARKEVEFVFAAHMDEVLAAALE 799
>gi|338535253|ref|YP_004668587.1| ATP-dependent protease La [Myxococcus fulvus HW-1]
gi|337261349|gb|AEI67509.1| ATP-dependent protease La [Myxococcus fulvus HW-1]
Length = 827
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/802 (47%), Positives = 520/802 (64%), Gaps = 80/802 (9%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
+G + RA + GA+D + G AR + L + G Y +V++GL
Sbjct: 72 IGVVTQRRAEEEDPGAAD---------LYTMGTVARIVKLLK-----MGEDNYSLVVQGL 117
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
RF V EL Y AR+ ++E K E VE + AL K A E+I ++ +
Sbjct: 118 ARFRVVELVQEAPYLKARVDAVE-DKTSSENVEVE----ALGINLKKLAREVIELMPELP 172
Query: 138 KTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQ 195
L+E++ P H LAD+ A+ ++ EE+ +L++VDLK R+ EL++R +
Sbjct: 173 AAATE---LVESITHPGH-LADLIAANVDVPIEEKQAVLETVDLKARMKLVLELLNRKRE 228
Query: 196 SIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPS 255
++++ KI V+G++SK+Q+E+ LRQQ++AIKEELG+ ++E++L L+ +++ A +P
Sbjct: 229 ILKLSNKIDSAVKGEMSKTQREYYLRQQLKAIKEELGEMGEEEEELDELQERLKKANLPP 288
Query: 256 NIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDH 315
++ K KEL RLK + YT +R YL+ IADLPW K SE+ +LD++ A+++LD DH
Sbjct: 289 DVEKVANKELNRLKTIPAASSEYTVARTYLDWIADLPWAKLSED-NLDIENARQQLDKDH 347
Query: 316 YGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGG 375
+G+ +VK+RI+EYLAVRKLK D RGP+LC VGPPGVGKTSL S+A A GRKF+R+SLGG
Sbjct: 348 FGIKKVKKRILEYLAVRKLKNDMRGPILCLVGPPGVGKTSLGQSVAKATGRKFVRLSLGG 407
Query: 376 VKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVL 435
V+DEA+IRGHRRTY+G++PGR I +K+ G NPVM+LDEIDK G+D RGDP++ALLEVL
Sbjct: 408 VRDEAEIRGHRRTYVGALPGRFIQSMKKAGTKNPVMMLDEIDKLGADFRGDPSAALLEVL 467
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN TF+DHYL+VPFDLSKV+FVATAN+ PIP PL DRME+IEL GYT EEK IA
Sbjct: 468 DPEQNNTFSDHYLDVPFDLSKVMFVATANQLDPIPGPLRDRMEIIELTGYTFEEKQSIAR 527
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
HL+P+ L +HGL + + I + + + YTREAGVRNLER +A + RA AV+VA
Sbjct: 528 IHLVPKQLKEHGLNPDHIDITDEALLTLTTAYTREAGVRNLERRIADICRAVAVEVA--- 584
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
G + E + I N R+
Sbjct: 585 -------------------------GGKTEKQTI----------NAERV----------- 598
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
+++LGP F E AER PG++ GL WT GG++ F+EAT M GKG + LTGQLGDV+
Sbjct: 599 KEILGPEMFYS-EVAERTEVPGVATGLAWTAAGGDLLFIEATKMAGKGGMTLTGQLGDVM 657
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
KESA AL+++R++A L + N L+ D+H+HFPAG++PKDGPSAGVT++TAL S
Sbjct: 658 KESATAALSYLRSKAEQLGISP----NFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTS 713
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
L + RVR DTAMTGE TLRGLVLPVGG+K+K+LAAHR GIKRVILPER KDLV+VP
Sbjct: 714 LLTGIRVRHDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLVDVPDQ 773
Query: 796 VLASLEIILAKRMEDVLEQAFE 817
LE I M+DVL+ A E
Sbjct: 774 ARNELEFIFVTHMDDVLKAALE 795
>gi|220917331|ref|YP_002492635.1| ATP-dependent protease La [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955185|gb|ACL65569.1| ATP-dependent protease La [Anaeromyxobacter dehalogenans 2CP-1]
Length = 835
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/802 (47%), Positives = 523/802 (65%), Gaps = 77/802 (9%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
+G + RA + GA+D + G AR + L + G Y +V++GL
Sbjct: 73 IGVVTQRRAEEEDPGAAD---------LYTVGTVARVVKLLK-----MGEDNYSLVVQGL 118
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
RF V EL Y ARI +E V D + AL+ K A E+I ++ +
Sbjct: 119 ARFKVLELVQESPYLKARIEP-----VEDRSVVDDVEVEALAINLKKLAREVIELMPELP 173
Query: 138 KTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQ 195
L+E++ P H LAD+ A+ ++ EE+ +L++V+LK R+ EL++R +
Sbjct: 174 AAATE---LVESITHPGH-LADLIAANVDVPIEEKQQVLETVELKARMKLVLELLNRKRE 229
Query: 196 SIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPS 255
++++ KI V+G++SK+Q+E+ LRQQ++AIKEELG+ ++E++L L+ +++ AG+P
Sbjct: 230 ILKLSNKIDSAVKGEMSKTQREYYLRQQLKAIKEELGELGEEEEELDELQERLKKAGLPP 289
Query: 256 NIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDH 315
+ K QKEL RLK + YT +R YL+ IADLPW K +++ +LD++ A++ LDSDH
Sbjct: 290 EVEKVAQKELNRLKSIPTASSEYTVARTYLDWIADLPWAKRTDD-NLDIENARQILDSDH 348
Query: 316 YGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGG 375
Y L ++K+RI+EYLAVRKLK D RGP+LCFVGPPGVGKTSL SIA A GRKF+R+SLGG
Sbjct: 349 YALEKIKKRILEYLAVRKLKNDMRGPILCFVGPPGVGKTSLGQSIARATGRKFVRLSLGG 408
Query: 376 VKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVL 435
V+DEA+IRGHRRTY+G++PGR+I +K+ G NPVM+LDEIDK G+D RGDP++ALLEVL
Sbjct: 409 VRDEAEIRGHRRTYVGALPGRIIQSMKKAGTVNPVMMLDEIDKLGADFRGDPSAALLEVL 468
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN F+DHYL++ +DLSKV+F+ TAN PIP PL DRME++ELPGYT EEK+ IA
Sbjct: 469 DPEQNHAFSDHYLDLSYDLSKVMFIGTANLLDPIPGPLKDRMEILELPGYTFEEKVHIAQ 528
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
HLIP+ L +HGL ++ + I E + +I YTREAGVRNLER +A + RA AV+VA
Sbjct: 529 NHLIPKQLREHGLSADAIAITEKALIKIIMAYTREAGVRNLERRIADVCRAIAVEVA--- 585
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
S + ++EA +
Sbjct: 586 -------------------------------------------SGKIGAAAKRAIEEADV 602
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
++LGP +F + E AER G++ GL WT GG++ F+EAT M GKG L LTGQLGDV+
Sbjct: 603 LEILGPEKFYN-ETAERTEIAGVATGLAWTAAGGDILFIEATKMPGKGALTLTGQLGDVM 661
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
KESAQ AL+++R+++ L + +N L+ D+HIHFPAGA+PKDGPSAGVT++TALVS
Sbjct: 662 KESAQAALSYLRSKSDSLGI----PVNFLEKTDLHIHFPAGAIPKDGPSAGVTILTALVS 717
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
L + RVR+D AMTGE+TLRGLVLPVGG+K+K+LAAHR GIKR+I+P RN KDL++VP
Sbjct: 718 LLTGIRVRSDVAMTGEVTLRGLVLPVGGIKEKVLAAHRAGIKRIIIPARNEKDLLDVPEQ 777
Query: 796 VLASLEIILAKRMEDVLEQAFE 817
+E + A M++VL A E
Sbjct: 778 ARKEVEFVFAAHMDEVLAAALE 799
>gi|31377667|ref|NP_113678.2| lon protease homolog 2, peroxisomal [Homo sapiens]
gi|74727668|sp|Q86WA8.1|LONP2_HUMAN RecName: Full=Lon protease homolog 2, peroxisomal; AltName:
Full=Lon protease-like protein 2; Short=Lon protease 2;
AltName: Full=Peroxisomal Lon protease
gi|28804187|emb|CAD68987.1| peroxisomal lon protease [Homo sapiens]
gi|62739604|gb|AAH93910.1| Lon peptidase 2, peroxisomal [Homo sapiens]
gi|62740210|gb|AAH93912.1| Lon peptidase 2, peroxisomal [Homo sapiens]
gi|119603130|gb|EAW82724.1| peroxisomal LON protease like, isoform CRA_b [Homo sapiens]
Length = 852
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/798 (46%), Positives = 517/798 (64%), Gaps = 37/798 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I G D+D DD+V LE+K++++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDV 566
L + +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE Q +E L S
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVT 595
Query: 567 HRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPP 622
R G E I E +S+T + P+++D L+ +LGPP
Sbjct: 596 EREGC--------------REHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPP 641
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
+ + E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A
Sbjct: 642 MY-EMEVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLA 700
Query: 683 LTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
++W+R+ A QL G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS +
Sbjct: 701 ISWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRL 760
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L
Sbjct: 761 VRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLS 820
Query: 802 IILAKRMEDVLEQAFEGG 819
+ A +++VL AF+GG
Sbjct: 821 FVTASCLDEVLNAAFDGG 838
>gi|390364524|ref|XP_790138.3| PREDICTED: lon protease homolog 2, peroxisomal-like
[Strongylocentrotus purpuratus]
Length = 707
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/691 (52%), Positives = 478/691 (69%), Gaps = 17/691 (2%)
Query: 146 LLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQ 205
LL+++PI +L DIF + + S+ E+L +LD+VDL+ R K L+ R ++ +R+ +
Sbjct: 5 LLDSLPITRLPDIFASIVKASYNEKLEVLDAVDLEKRFQKTLPLLARQIEGLRLLRHAKR 64
Query: 206 KVEGQL-------SKSQKEFLLRQ---QMRAI--KEELGDNDDDEDDLVALERKMQSAGM 253
+ K + +L+ + R I E+ DN+ + D++ L+RK++ A M
Sbjct: 65 GSDNHRMPHALKEDKENRVVVLKNSPGRPRFIDRHEKSDDNESEGDEISELDRKIKDANM 124
Query: 254 PSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDS 313
P + K QKEL+RLKKM P Y +R YLEL++++PW K S++ LD+K A+ LD+
Sbjct: 125 PKHALKACQKELKRLKKMPSAMPEYAMTRNYLELMSEVPWSKQSKDT-LDIKQARIDLDA 183
Query: 314 DHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISL 373
DHYGL ++K+R+IEYLAVR+LK +GP+LCFVGPPGVGKTSL SIA LGR F RISL
Sbjct: 184 DHYGLDKLKKRVIEYLAVRQLKNSLKGPILCFVGPPGVGKTSLGRSIAHTLGRAFHRISL 243
Query: 374 GGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLE 433
GG D++DIRGHRRTYIGSMPGR+I GLK VGV NPV LLDEIDK G ++GDPASALLE
Sbjct: 244 GGCCDQSDIRGHRRTYIGSMPGRIIHGLKNVGVNNPVFLLDEIDKLGKSLQGDPASALLE 303
Query: 434 VLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRI 493
VLDPEQN F DHYLNV FDLS+V+F+ATAN Q IPP L DRMEVI++PGYT EEK I
Sbjct: 304 VLDPEQNNAFTDHYLNVQFDLSQVLFIATANSLQTIPPALKDRMEVIQVPGYTQEEKFHI 363
Query: 494 AMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE 553
A HLIP+ L +HGL E LQ E +K +I ++TREAGVR LER A+ RA AV+VAE
Sbjct: 364 AKDHLIPKQLKEHGLTYEQLQFAEDAIKYIISKFTREAGVRQLERKFGAVCRAVAVRVAE 423
Query: 554 QEQEQALPSSKDVHRLGSPLL---DNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
+ + PS+ +P+ D + + E+ E T E + P+V+
Sbjct: 424 TQMSKRKPSAGSSSEEDAPMAPRGDRETKEEVKTELTDETSLELTTEAAIAHPPEMPIVI 483
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
D ++ +LG ++ E +ER++ PG++VG+ WT GGE+ +VEAT M G GEL LTGQ
Sbjct: 484 DVLAVQDILGTAIYES-ETSERLSQPGVAVGMAWTPMGGEIMYVEATKMEGDGELTLTGQ 542
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV++ESAQ+AL WVR+ A+ L + ++ ++L++G D+HIHFPAGAV KDGPSAGVT+V
Sbjct: 543 LGDVMRESAQLALNWVRSNASKLAIDSKPVVDLMEGTDVHIHFPAGAVGKDGPSAGVTVV 602
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
T LVSLFS + VR+DTAMTGE+TLRGLVLPVGG+K K+LAAHR GIK +ILP+R KDL
Sbjct: 603 TVLVSLFSGRCVRSDTAMTGEITLRGLVLPVGGIKSKVLAAHRAGIKHIILPKRCEKDLE 662
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
E+P + L+ LA R+EDVL+ AF GG P
Sbjct: 663 EIPQNIKNELKFTLATRLEDVLQNAFVGGFP 693
>gi|417405080|gb|JAA49265.1| Putative lon protease log 2 peroxisomal [Desmodus rotundus]
Length = 879
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/760 (47%), Positives = 500/760 (65%), Gaps = 30/760 (3%)
Query: 70 YIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMEL 129
Y +++ GLCRF + ++ Y A + L+ + + LS QF A++L
Sbjct: 127 YTLLITGLCRFQIVQVLKEKPYPVAEVEQLDRLEEFPHSGRTREELGELSEQFYKYAVQL 186
Query: 130 ISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATEL 189
+ +L+ + + LL+++P L DI + S +E+L +LD+V L+ R L
Sbjct: 187 VEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPL 246
Query: 190 VDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVAL 244
+ R ++ + K+ K K + + R I G ++D DD+V L
Sbjct: 247 LVRQIEGL----KLLHKTRKHKQDEDKRVIAIRPTRRILPLPGTLEDEEEEEDNDDIVML 302
Query: 245 ERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDL 304
E+K++++ MP K KE+RRLKKM P Y +R YLEL+ +LPW K++ + LD+
Sbjct: 303 EKKIRTSHMPEQAHKVCVKEIRRLKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDI 361
Query: 305 KAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASAL 364
+AA+ LDSDHY + ++K+R++EYLAVR+LK D +GP+LCFVGPPGVGKTS+ S+A L
Sbjct: 362 RAARALLDSDHYAMEKLKKRVLEYLAVRQLKNDLKGPILCFVGPPGVGKTSVGRSVAKTL 421
Query: 365 GRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVR 424
GR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK V V NPV LLDE+DK G ++
Sbjct: 422 GREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVAVNNPVFLLDEVDKLGKSLQ 481
Query: 425 GDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPG 484
GDPA+ALLEVLDPEQN F DHYLNV FDLS+V+F+ATAN IPP LLDRME+I++PG
Sbjct: 482 GDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPPALLDRMEIIQVPG 541
Query: 485 YTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALA 544
YT EEK+ IA RHL+P+ L+QHGL + +QIP+ +I RYTREAGVR+L+R L A+
Sbjct: 542 YTQEEKIEIAHRHLVPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAIC 601
Query: 545 RAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRI 604
RA AVKVAE + ++A LD A AE E + + ++ T +
Sbjct: 602 RAVAVKVAEGQHKEA-------------KLDRADATEAEGCREHV-LDTKPESINGTADL 647
Query: 605 ----TSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
P+++D L+ +LGPP + + E +ER++ PG+++GL W+ GGE+ FVEA+ M
Sbjct: 648 GLPPEMPILIDFHALKDILGPPMY-EMEVSERLSQPGVAIGLAWSPLGGEIMFVEASRMD 706
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVP 719
G+G+L LTGQLGDV+KESA +A++W+R+ A L G +LL D+H+HFPAGAV
Sbjct: 707 GEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYHLTNASGSFDLLDNTDVHLHFPAGAVT 766
Query: 720 KDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRV 779
KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+KRV
Sbjct: 767 KDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRV 826
Query: 780 ILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
I+P+RN KDL E+P V L + A ++DVL AF+GG
Sbjct: 827 IIPQRNEKDLEEIPGNVRQDLSFVTASCLDDVLNAAFDGG 866
>gi|432862335|ref|XP_004069804.1| PREDICTED: lon protease homolog 2, peroxisomal-like isoform 1
[Oryzias latipes]
Length = 855
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/809 (46%), Positives = 527/809 (65%), Gaps = 51/809 (6%)
Query: 37 KNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI 96
++ +E+ H G A A+ + G P + Y +++ GLCRF V L + A +
Sbjct: 68 QDTEELPTLHTIGTAGIAVQVV-GSNWP--KPHYTLLITGLCRFRVSGLLKERPFVLAEV 124
Query: 97 SSLEMTKIEMEQVE---------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLL 147
L+ +EQ D + LS++F A++L+ +L+ + + LL
Sbjct: 125 EQLD----NLEQYTTSTTEGTTADDGELGELSQKFHQAAVQLLGMLDMSVPAVAKFRRLL 180
Query: 148 ETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKV 207
+++P L D+ + S +E+L +LD+V L+ R + ++ R ++ +++ +K +
Sbjct: 181 DSLPREMLPDVVASMIRTSNKEKLQVLDAVSLEERFRRTLPMLTRQIEGLKLLKKSRKMT 240
Query: 208 EGQLSKSQKEFLLRQQMRAIK-----------EELGDNDDDEDDLVALERKMQSAGMPSN 256
G ++K L MR K + D+DDD DD +LE+K+ A MP
Sbjct: 241 PG----NEKRVL---SMRNSKGGPFPGRQFSLDRDEDSDDDGDDTASLEKKVHGANMPEA 293
Query: 257 IWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHY 316
K KEL+RLKKM P Y +R YL+L+ +LPW +++++ LD++AA+ LD+DHY
Sbjct: 294 ALKVSLKELKRLKKMPQSMPEYALTRNYLDLMVELPWSRSTKDC-LDIRAARVLLDNDHY 352
Query: 317 GLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGV 376
+ ++K+R++EYLAVR+LK +GP+LCFVGPPGVGKTS+ SIA LGR+F RI+LGGV
Sbjct: 353 AMEKLKRRVLEYLAVRQLKTSLKGPILCFVGPPGVGKTSVGRSIAKTLGREFHRIALGGV 412
Query: 377 KDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLD 436
D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLD
Sbjct: 413 CDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLD 472
Query: 437 PEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMR 496
PEQN +F DHYLNV FDLS+V+F+ATAN IPP LLDRMEV+++PGYT EEK+ IA R
Sbjct: 473 PEQNHSFTDHYLNVAFDLSQVLFIATANTTATIPPALLDRMEVLQVPGYTQEEKVEIAHR 532
Query: 497 HLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQ 556
HLIP L+QHGL + L IP+ + +I RYTREAGVR+LER + A+ RA AVKVAE +
Sbjct: 533 HLIPNQLEQHGLTPQQLHIPQESTQDIICRYTREAGVRSLERKIGAICRAVAVKVAEGHR 592
Query: 557 EQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLE 616
LP + SP E E + P ++ + P+V+D+ L+
Sbjct: 593 ---LPETDASSLETSP--------QQEGERQQTPQRFDQNKAAPP---EMPIVIDQMALK 638
Query: 617 KVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIK 676
+LGPP F + E +ER+ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+K
Sbjct: 639 DILGPPLF-ELEVSERLTLPGVALGLAWTPLGGEIMFVEASRMEGEGQLTLTGQLGDVMK 697
Query: 677 ESAQIALTWVRARATDLQLVAEDGM-NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
ESA +A++W+RA A QL G + L+G DIH+HFPAGAV KDGPSAGVT+VT L S
Sbjct: 698 ESAHLAISWLRANAKTYQLTNMVGAPDPLEGTDIHLHFPAGAVTKDGPSAGVTIVTCLAS 757
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
LFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+KRVILP+RN KDL E+PA
Sbjct: 758 LFSGRLVRSDIAMTGEITLRGLVLPVGGIKDKVLAAHRAGVKRVILPKRNEKDLEELPAN 817
Query: 796 VLASLEIILAKRMEDVLEQAFEGGCPWRQ 824
V A L+ + A +++VL +F+GG P Q
Sbjct: 818 VRAQLDFVTAGNLDEVLNASFDGGFPGAQ 846
>gi|241573929|ref|XP_002403232.1| protease, putative [Ixodes scapularis]
gi|215500198|gb|EEC09692.1| protease, putative [Ixodes scapularis]
Length = 832
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/793 (47%), Positives = 514/793 (64%), Gaps = 44/793 (5%)
Query: 36 GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR 95
G N++E H+ G A + ++ G P R +Y +++ GLCRF + L Y
Sbjct: 64 GSNEEEAWSMHHLGTAGIVVQVT-GTNWP--RPSYTLLVTGLCRFRIDSLMQESPYLVGN 120
Query: 96 ISSLE-MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHK 154
+S L+ + I+++ + + + L QF+ A +LI +L+ + R K LL ++P+
Sbjct: 121 VSQLDKLPAIDID--DHNTELSELMDQFREQATKLIDMLDLSVPSIVRLKRLLVSLPVQS 178
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
L D+ A S E+L +LD+VDL R K L+ R ++ +++ + K +G S+S
Sbjct: 179 LPDVCAAIVRASHAERLQVLDAVDLGDRFKKTLPLLIRQIEGLQLLQH--AKKDGSTSRS 236
Query: 215 -QKEFLL-----RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRL 268
Q E L RQQ+ ++ ++ D++ +LE+K+++A MP + K KEL+RL
Sbjct: 237 FQVEKLASSHRPRQQLDIDDDDF----EEGDEVGSLEKKIKAAEMPDHARKVATKELQRL 292
Query: 269 KKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEY 328
KKM P P + +R YLEL+ DLPW + S E+ +DL ++ LD+DHYG+ ++K+R++EY
Sbjct: 293 KKMPPHMPEHAMTRNYLELLIDLPWSQYSPEV-VDLNKSRSDLDADHYGMEKLKKRVLEY 351
Query: 329 LAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRT 388
LAVRKLK +GP+LCFVGPPGVGKTS+ SIA +LGR+ ISLGGV D+AD+RGHRRT
Sbjct: 352 LAVRKLKSSLKGPILCFVGPPGVGKTSVGRSIARSLGRE---ISLGGVSDQADVRGHRRT 408
Query: 389 YIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL 448
YIGSMPGR+I GL+ VGV NPV LLDEIDK + GDPA+ALLEVLDPEQN F DHYL
Sbjct: 409 YIGSMPGRIIQGLRTVGVKNPVFLLDEIDKMTPGIHGDPAAALLEVLDPEQNCAFIDHYL 468
Query: 449 NVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGL 508
N+P+DLS V+F+ATAN IP LLDRMEVI + GYT EEK IA HL+PR L +HG+
Sbjct: 469 NIPYDLSNVLFIATANTLATIPAALLDRMEVIAVAGYTHEEKNHIARNHLLPRQLKEHGI 528
Query: 509 GSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR 568
++ +Q+ + + ++ +YTREAGVR LER + AL RA AVK+ E+E
Sbjct: 529 TNDMMQVTDDAISKLVVKYTREAGVRTLERKIGALCRAVAVKIVEKEN------------ 576
Query: 569 LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDRE 628
L+D AE + + ST + P+V+DE +E +LGPP + D E
Sbjct: 577 ---------LSDLAEEASQEPVLNVSTSVTVAPHPPSLPIVIDEVAVEDILGPPLY-DLE 626
Query: 629 AAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRA 688
R+ PG++VGL WT GGE+ FVEA+ M G G+L LTGQLGDV+KESA++AL W+R
Sbjct: 627 MDSRLLQPGVAVGLAWTVAGGEIMFVEASRMEGDGQLVLTGQLGDVMKESAKLALNWLRI 686
Query: 689 RATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAM 748
A + + G +L++G D+H+HFPAGAV KDGPSAGVT+VT LVSLF+ + V D AM
Sbjct: 687 HADKFSIPVQRGADLMEGTDVHVHFPAGAVCKDGPSAGVTIVTVLVSLFTGRTVLPDVAM 746
Query: 749 TGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRM 808
TGE+TL+GLVLPVGG+KDK+LAAHR G+ +VILP+RN KDL EVP +V L L +
Sbjct: 747 TGEITLQGLVLPVGGIKDKVLAAHRAGMCKVILPKRNKKDLQEVPQSVKDDLTFHLVTHI 806
Query: 809 EDVLEQAFEGGCP 821
E+VL+ AFEGG P
Sbjct: 807 EEVLQHAFEGGFP 819
>gi|442320890|ref|YP_007360911.1| ATP-dependent protease La [Myxococcus stipitatus DSM 14675]
gi|441488532|gb|AGC45227.1| ATP-dependent protease La [Myxococcus stipitatus DSM 14675]
Length = 829
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/811 (47%), Positives = 526/811 (64%), Gaps = 81/811 (9%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
+G + RA + GA+D + G AR + L + G Y +V++GL
Sbjct: 72 IGVVTQRRAEEEDPGAAD---------LYTMGTVARIVKLLK-----MGEDNYSLVVQGL 117
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
RF V EL Y AR+ ++E K E VE + AL K A E+I ++ +
Sbjct: 118 ARFRVVELVQEAPYLKARVDAVE-DKTSAENVEVE----ALGINLKKLAREVIELMPELP 172
Query: 138 KTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQ 195
L+E++ P H LAD+ A+ ++ EE+ +L++VDLK R+ EL++R +
Sbjct: 173 AAATE---LVESITHPGH-LADLIAANVDVPIEEKQAVLETVDLKARMKLVLELLNRKRE 228
Query: 196 SIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPS 255
++++ KI V+G++SK+Q+E+ LRQQ++AIKEELG+ ++E++L L+ +++ A +P
Sbjct: 229 ILKLSNKIDSAVKGEMSKTQREYYLRQQLKAIKEELGEMGEEEEELDELQERLKKAALPP 288
Query: 256 NIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDH 315
+ K KEL RLK + YT +R YL+ IADLPW K SE+ +LD++ A+++LD DH
Sbjct: 289 EVEKVANKELNRLKTIPAASSEYTVARTYLDWIADLPWSKLSED-NLDIENARQQLDKDH 347
Query: 316 YGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGG 375
+G+ +VK+RI+EYLAVRKLK D RGP+LC VGPPGVGKTSL S+A A GRKF+R+SLGG
Sbjct: 348 FGIKKVKKRILEYLAVRKLKNDMRGPILCLVGPPGVGKTSLGQSVAKATGRKFVRLSLGG 407
Query: 376 VKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVL 435
V+DEA+IRGHRRTY+G++PGR I +K+ G NPVM+LDEIDK G+D RGDP++ALLEVL
Sbjct: 408 VRDEAEIRGHRRTYVGALPGRFIQSMKKAGTKNPVMMLDEIDKLGADFRGDPSAALLEVL 467
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN TF+DHYL+VPFDLSKV+F+ATAN+ PIP PL DRME+IEL GYT EEK IA
Sbjct: 468 DPEQNNTFSDHYLDVPFDLSKVMFIATANQLDPIPGPLRDRMEIIELSGYTFEEKQSIAR 527
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
HL+P+ L +HGL + ++I + + + YTREAGVRNLER +A + RA AV+VA
Sbjct: 528 IHLVPKQLKEHGLNGDHIEINDEALLTLTTSYTREAGVRNLERRIADICRAVAVEVA--- 584
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
G ++E + I N R+
Sbjct: 585 -------------------------GGKLEKQTI----------NAERV----------- 598
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
+++LGP F E AER PG++ GL WT GG++ F+EAT M GKG + LTGQLGDV+
Sbjct: 599 KEILGPEMFYS-EVAERTEVPGVATGLAWTAAGGDLLFIEATKMAGKGGMTLTGQLGDVM 657
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
KESA AL+++R+++ L + N L+ D+H+HFPAG++PKDGPSAGVT++TAL S
Sbjct: 658 KESATAALSYLRSKSESLGISP----NFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTS 713
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
L + RVR DTAMTGE TLRGLVLPVGG+K+K+LAAHR GIKRVILPER KDLV+VP
Sbjct: 714 LLTGIRVRHDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLVDVPDQ 773
Query: 796 VLASLEIILAKRMEDVLEQAFEGGCPWRQHS 826
LE I +M++VL+ A E P++ +
Sbjct: 774 AKKELEFIFVSQMDEVLKAALE-TSPFKSSA 803
>gi|344289322|ref|XP_003416393.1| PREDICTED: lon protease homolog 2, peroxisomal [Loxodonta africana]
Length = 852
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/792 (46%), Positives = 513/792 (64%), Gaps = 32/792 (4%)
Query: 38 NQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARIS 97
+ Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y A +
Sbjct: 69 DAQDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYPVAEVE 125
Query: 98 SLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
L+ + + + L QF A++L+ +L+ + + LL+++P L D
Sbjct: 126 QLDRLEEFPSTCKTREELGELPEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPD 185
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
I + S +E+L +LD+V L+ R L+ R ++ + K+ K
Sbjct: 186 ILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLHNTRKHKQDDNKR 241
Query: 218 FLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQ 272
+ + +R I G ++D DD+V LE+K+Q++ MP K KE++RLKKM
Sbjct: 242 VIAIRPVRRIMHIPGTLEDEDENEDNDDIVMLEKKIQTSSMPEQAHKVCVKEIKRLKKMP 301
Query: 273 PQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVR 332
P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLAVR
Sbjct: 302 QSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLEYLAVR 360
Query: 333 KLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGS 392
+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++D+RGHRRTY+GS
Sbjct: 361 QLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDVRGHRRTYVGS 420
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
MPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV F
Sbjct: 421 MPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAF 480
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL +
Sbjct: 481 DLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQ 540
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSP 572
+QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE + ++A
Sbjct: 541 IQIPQVTTLDIITRYTREAGVRSLDRRLGAICRAVAVKVAEGQHKEA------------- 587
Query: 573 LLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDRE 628
LD+ + E E I +T P+++D L+ +LGPP + + E
Sbjct: 588 KLDHLVMTEGEGCREHILEDAKPKSFDDTTDFALPPEMPILIDFHALKDILGPPMY-EME 646
Query: 629 AAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRA 688
+ER++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R+
Sbjct: 647 VSERLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRS 706
Query: 689 RATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTA 747
A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D A
Sbjct: 707 NAKKYHLTNASGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVA 766
Query: 748 MTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKR 807
MTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P+RN KDL E+P V L ++A
Sbjct: 767 MTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIVPQRNEKDLEEIPGNVRQDLSFVMASC 826
Query: 808 MEDVLEQAFEGG 819
+++VL AF+GG
Sbjct: 827 LDEVLNAAFDGG 838
>gi|426382121|ref|XP_004057669.1| PREDICTED: lon protease homolog 2, peroxisomal isoform 1 [Gorilla
gorilla gorilla]
Length = 852
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/798 (46%), Positives = 517/798 (64%), Gaps = 37/798 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I G D+D DD+V LE+K++++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPVRRITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDV 566
L + +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE Q +E L S
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVT 595
Query: 567 HRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPP 622
R G E I E +S+T + P+++D L+ +LGPP
Sbjct: 596 EREGC--------------REHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPP 641
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
+ + E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A
Sbjct: 642 MY-EMEVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLA 700
Query: 683 LTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
++W+R+ A QL G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS +
Sbjct: 701 ISWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRL 760
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L
Sbjct: 761 VRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLS 820
Query: 802 IILAKRMEDVLEQAFEGG 819
+ A +++VL AF+GG
Sbjct: 821 FVTASCLDEVLNAAFDGG 838
>gi|22760442|dbj|BAC11201.1| unnamed protein product [Homo sapiens]
Length = 852
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/798 (46%), Positives = 516/798 (64%), Gaps = 37/798 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I G D+D DD+V LE+K++++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDV 566
L + +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE Q +E L S
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVT 595
Query: 567 HRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPP 622
R G E I E +S+T + P+ +D L+ +LGPP
Sbjct: 596 EREGC--------------REHILEDEKPESISDTTDLALPPEMPIFIDFHALKDILGPP 641
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
+ + E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A
Sbjct: 642 MY-EMEVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLA 700
Query: 683 LTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
++W+R+ A QL G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS +
Sbjct: 701 ISWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRL 760
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L
Sbjct: 761 VRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLS 820
Query: 802 IILAKRMEDVLEQAFEGG 819
+ A +++VL AF+GG
Sbjct: 821 FVTASCLDEVLNAAFDGG 838
>gi|405375910|ref|ZP_11029927.1| ATP-dependent protease [Chondromyces apiculatus DSM 436]
gi|397085864|gb|EJJ17037.1| ATP-dependent protease [Myxococcus sp. (contaminant ex DSM 436)]
Length = 827
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/802 (47%), Positives = 520/802 (64%), Gaps = 80/802 (9%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
+G + RA + GA+D + G AR + L + G Y +V++GL
Sbjct: 72 IGVVTQRRAEEEDPGAAD---------LYTMGTVARIVKLLK-----MGEDNYSLVVQGL 117
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
RF V EL Y AR+ ++E K E VE + AL K A E+I ++ +
Sbjct: 118 ARFRVVELVQEAPYLKARVDAVE-DKTSSENVEVE----ALGINLKKLAREVIELMPELP 172
Query: 138 KTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQ 195
L+E++ P H LAD+ A+ ++ EE+ +L++VDLK R+ EL++R +
Sbjct: 173 AAATE---LVESITHPGH-LADLIAANVDVPIEEKQAVLETVDLKARMKLVLELLNRKRE 228
Query: 196 SIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPS 255
++++ KI V+G++SK+Q+E+ LRQQ++AIKEELG+ ++E++L L+ +++ A +P
Sbjct: 229 ILKLSNKIDSAVKGEMSKTQREYYLRQQLKAIKEELGEMGEEEEELDELQERLKKANLPP 288
Query: 256 NIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDH 315
++ K KEL RLK + YT +R YL+ IADLPW K SE+ +LD++ A+++LD DH
Sbjct: 289 DVEKVANKELNRLKTIPAASSEYTVARTYLDWIADLPWAKLSED-NLDIENARQQLDKDH 347
Query: 316 YGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGG 375
+G+ +VK+RI+EYLAVRKLK D RGP+LC VGPPGVGKTSL S+A A GRKF+R+SLGG
Sbjct: 348 FGIKKVKKRILEYLAVRKLKNDMRGPILCLVGPPGVGKTSLGQSVAKATGRKFVRLSLGG 407
Query: 376 VKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVL 435
V+DEA+IRGHRRTY+G++PGR I +K+ G NPVM+LDEIDK G+D RGDP++ALLEVL
Sbjct: 408 VRDEAEIRGHRRTYVGALPGRFIQSMKKAGTKNPVMMLDEIDKLGADFRGDPSAALLEVL 467
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN TF+DHYL+VPFDLSKV+FVATAN+ PIP PL DRME+IEL GYT EEK IA
Sbjct: 468 DPEQNNTFSDHYLDVPFDLSKVMFVATANQLDPIPGPLRDRMEIIELTGYTFEEKQSIAR 527
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
HL+P+ L +HGL + + I + + + YTREAGVRNLER +A + RA AV+VA
Sbjct: 528 IHLVPKQLKEHGLSPDHIDITDEALLTLTTAYTREAGVRNLERRIADICRAVAVEVA--- 584
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
G + E + I N R+
Sbjct: 585 -------------------------GGKTEKQNI----------NADRV----------- 598
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
+++LGP F E AER PG++ GL WT GG++ F+EAT M GKG + LTGQLGDV+
Sbjct: 599 KEILGPEMFYS-EVAERTEVPGVATGLAWTAAGGDLLFIEATKMAGKGGMTLTGQLGDVM 657
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
KESA AL+++R++A L + N L+ D+H+HFPAG++PKDGPSAGVT++TAL S
Sbjct: 658 KESATAALSYLRSKAEQLGISP----NFLEKTDLHLHFPAGSIPKDGPSAGVTILTALTS 713
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
L + RVR DTAMTGE TLRGLVLPVGG+K+K+LAAHR GIKRVILPER KDL++VP
Sbjct: 714 LLTGIRVRHDTAMTGEATLRGLVLPVGGIKEKVLAAHRAGIKRVILPERCRKDLIDVPDQ 773
Query: 796 VLASLEIILAKRMEDVLEQAFE 817
LE I M+DVL+ A E
Sbjct: 774 ARNELEFIFVTHMDDVLKAALE 795
>gi|332845860|ref|XP_520624.3| PREDICTED: lon protease homolog 2, peroxisomal isoform 2 [Pan
troglodytes]
gi|397498139|ref|XP_003819849.1| PREDICTED: lon protease homolog 2, peroxisomal isoform 1 [Pan
paniscus]
gi|410223018|gb|JAA08728.1| lon peptidase 2, peroxisomal [Pan troglodytes]
gi|410257432|gb|JAA16683.1| lon peptidase 2, peroxisomal [Pan troglodytes]
gi|410257434|gb|JAA16684.1| lon peptidase 2, peroxisomal [Pan troglodytes]
gi|410257436|gb|JAA16685.1| lon peptidase 2, peroxisomal [Pan troglodytes]
gi|410291416|gb|JAA24308.1| lon peptidase 2, peroxisomal [Pan troglodytes]
gi|410329615|gb|JAA33754.1| lon peptidase 2, peroxisomal [Pan troglodytes]
Length = 852
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/798 (46%), Positives = 517/798 (64%), Gaps = 37/798 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I G D+D DD+V LE+K++++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDV 566
L + +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE Q +E L S
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVT 595
Query: 567 HRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPP 622
R G E I E +S+T + P+++D L+ +LGPP
Sbjct: 596 EREGC--------------REHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPP 641
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
+ + E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A
Sbjct: 642 MY-EMEVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLA 700
Query: 683 LTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
++W+R+ A QL G +LL D+H+HFPAGAV KDGPSAGVT+VT L SLFS +
Sbjct: 701 ISWLRSNAKKYQLTNAFGSFDLLDNTDVHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRL 760
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L
Sbjct: 761 VRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLS 820
Query: 802 IILAKRMEDVLEQAFEGG 819
+ A +++VL AF+GG
Sbjct: 821 FVTASCLDEVLNAAFDGG 838
>gi|312837076|ref|NP_001186149.1| peroxisomal Lon protease homolog 2 [Gallus gallus]
Length = 852
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/784 (46%), Positives = 515/784 (65%), Gaps = 32/784 (4%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G AA A+ + G P T +V GLCRF + ++ Y A + L+ +
Sbjct: 77 HRIGTAALAVQVV-GSNWPKPHYTLLVT--GLCRFQILQVLKEKPYPVAEVEQLDRLEQF 133
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
Q + + + LS QF A++L+ +L+ + + LL+ +P L DI +
Sbjct: 134 TNQHKSEEELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDNLPREALPDILTSIIRT 193
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
S +E+L +LD+V L+ R L+ R ++ + K+ QK K + + R
Sbjct: 194 SNQEKLQILDAVRLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQDDDKRVVAIRPNR 249
Query: 226 AIKE-----ELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
I E + ++D DD+V LE+K++++ M K KE++RLKKM P Y
Sbjct: 250 RINHIPSTAEDEEEEEDHDDVVMLEKKIRTSSMSEQALKVCLKEIKRLKKMPQSMPEYAL 309
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
+R YLEL+ +LPW K++++ L+++AA+ LD+DHY + ++K+R++EYLAVR+LK + +G
Sbjct: 310 TRNYLELMVELPWNKSTKD-RLEIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKG 368
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LCFVGPPGVGKTS+ SIA LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+G
Sbjct: 369 PILCFVGPPGVGKTSVGRSIAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIING 428
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
LK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN +F DHYLNV FDLS+V+F+
Sbjct: 429 LKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHSFTDHYLNVAFDLSQVLFI 488
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
ATAN IPP LLDRMEVI++PGYT EEK+ IA RHLIP+ L+QHGL + +QIP+
Sbjct: 489 ATANTTATIPPALLDRMEVIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTT 548
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I RYTREAGVR+L+R L A+ RA AVKVAE + ++ P + L +
Sbjct: 549 LDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKETKPDRSE------------LGE 596
Query: 581 GAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAAP 636
G + + V +S +S+ + P+++D L+ +LGPP + + E +ER++ P
Sbjct: 597 GEDCKEHVTEDAKS-ESISDAADLALPPEMPILIDFHALKDILGPPMY-EMEVSERLSQP 654
Query: 637 GISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLV 696
G+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R+ A QL
Sbjct: 655 GVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKRYQLT 714
Query: 697 AEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + V +D AMTGE+TLR
Sbjct: 715 NASGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVCSDVAMTGEITLR 774
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
GLVLPVGG+KDK+LAAHR G+KR+I+P+RN KDL E+ V L +LA +++VL A
Sbjct: 775 GLVLPVGGIKDKVLAAHRAGLKRIIIPQRNEKDLEEIALNVRQDLTFVLASCLDEVLNAA 834
Query: 816 FEGG 819
F+GG
Sbjct: 835 FDGG 838
>gi|443712674|gb|ELU05883.1| hypothetical protein CAPTEDRAFT_206144 [Capitella teleta]
Length = 790
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/790 (45%), Positives = 521/790 (65%), Gaps = 45/790 (5%)
Query: 36 GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR 95
G E+ H+ G AA + ++ G P + Y ++ GLCRF V+E+ Y A+
Sbjct: 25 GNESDELNTLHSIGTAAVVVQVT-GTNWP--QPAYTLLATGLCRFKVEEILQETPYPVAK 81
Query: 96 ISSLEMTK-IEME-QVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIH 153
+ L+ + +E + V+ + L+ +F+ A L+++L+ G+ K +L+++P
Sbjct: 82 VKQLDKLRGLEDDASVKMSAELEDLAEEFREHASRLVNLLDISIPVVGKLKRMLDSLPTE 141
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
L D+ V+ + S+ E++ +LD++DL R K L+ R ++ +++ +K + Q +
Sbjct: 142 HLPDVAVSIVKASYAEKIQVLDALDLAERFKKTLPLLSRQIEGLKLLQKARKNSLNQNKQ 201
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+ K +++ MR + +E D+D+D+L LE K++SA MP+ K KEL+RLK+M
Sbjct: 202 NSKAISMKKVMRKLNDES-SLDEDDDELSELEEKIRSANMPAEADKAAMKELKRLKRMPQ 260
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
Q P + R YL+L+ +LPW K + + LD+K A++ LD DHYGL ++K+R+IEYLAVR+
Sbjct: 261 QMPEHAMIRNYLDLMVELPWSKMTSD-SLDIKQARKYLDEDHYGLDKLKKRVIEYLAVRQ 319
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
LK + +GP+LCFVGPPGVGKTS+ SIA LGR+F RI+LGGV D++DIRGHRRTYIGSM
Sbjct: 320 LKNELKGPILCFVGPPGVGKTSIGRSIAQTLGREFHRIALGGVCDQSDIRGHRRTYIGSM 379
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR++ GLK+VGV NPV LLDEIDK + + GDPA+ALLEVLDPEQN F DHYLN PFD
Sbjct: 380 PGRIVQGLKQVGVKNPVFLLDEIDKLTTSLHGDPAAALLEVLDPEQNHAFVDHYLNTPFD 439
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS+V+F+ATAN IP LLDRME+I +PGYT EEK+ IA+RHL P+ L +HGL E L
Sbjct: 440 LSQVLFIATANTMATIPGALLDRMELISIPGYTQEEKVHIALRHLCPKQLKEHGLTMEQL 499
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
QI + ++ + +Y+REAGVR LER +AA+ RA AV+VAE E P
Sbjct: 500 QITDDAIQCIASKYSREAGVRTLERRIAAVCRAVAVRVAESRGETTDP------------ 547
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
E + ++ P P+V+DE +E +LGPP ++ E +ER+
Sbjct: 548 ---------EKDKDLPP--------------EMPIVIDENAIEDILGPPMYES-ETSERL 583
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAM--RGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
+ PG+++GL WT GGE+ +VEA+ + R G+L LTGQLGDV+KESA +A WVRA A
Sbjct: 584 SQPGVAIGLAWTPMGGEILYVEASKVEDRSDGKLTLTGQLGDVMKESANLAFNWVRAHAK 643
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
++ + L++ +H+HFPAGA+ KDGPSAGVT+VT +VSLF+ + VR+DTAMTGE
Sbjct: 644 KVRSKLDLQRELMERCGLHVHFPAGAISKDGPSAGVTIVTVIVSLFAERCVRSDTAMTGE 703
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRGLVLPVGG+K+K+L AHR G+ RVILP RN KDL +VP + +++ I +++E+V
Sbjct: 704 VTLRGLVLPVGGIKEKVLGAHRAGLTRVILPSRNQKDLHDVPDNIKSAMSFIFVRQLEEV 763
Query: 812 LEQAFEGGCP 821
L+ AFEGG P
Sbjct: 764 LQAAFEGGFP 773
>gi|197098946|ref|NP_001126515.1| lon protease homolog 2, peroxisomal [Pongo abelii]
gi|75070538|sp|Q5R6M5.1|LONP2_PONAB RecName: Full=Lon protease homolog 2, peroxisomal; AltName:
Full=Lon protease-like protein 2; Short=Lon protease 2;
AltName: Full=Peroxisomal Lon protease
gi|55731762|emb|CAH92585.1| hypothetical protein [Pongo abelii]
Length = 852
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/798 (46%), Positives = 515/798 (64%), Gaps = 37/798 (4%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 IAEVEQLDRLEEFPSTCKMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ + K+ QK
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQ 236
Query: 213 KSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I G D+D DD+V LE++++++ MP K KE++R
Sbjct: 237 DDDKRVIAIRPIRRITHISGTLEDEDEDEDNDDIVMLEKEIRTSSMPEQAHKVCVKEIKR 296
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 297 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLE 355
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YL VR+LK + +GP+LCFVGPPGVGKTS+ +A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 356 YLVVRQLKNNLKGPILCFVGPPGVGKTSVGRLVAKTLGREFHRIALGGVCDQSDIRGHRR 415
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 416 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 475
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 476 LNVAFDLSRVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 535
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDV 566
L + +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE Q +E L S
Sbjct: 536 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVT 595
Query: 567 HRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPP 622
R G E I E +S+T + P+++D L+ +LGPP
Sbjct: 596 EREGC--------------REHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPP 641
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
+ + E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A
Sbjct: 642 MY-EMEVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLA 700
Query: 683 LTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
++W+R+ A QL G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS +
Sbjct: 701 ISWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSERL 760
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L
Sbjct: 761 VRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLS 820
Query: 802 IILAKRMEDVLEQAFEGG 819
+ A +++VL AF+GG
Sbjct: 821 FVTASCLDEVLNAAFDGG 838
>gi|449472892|ref|XP_004176278.1| PREDICTED: LOW QUALITY PROTEIN: lon protease homolog 2, peroxisomal
[Taeniopygia guttata]
Length = 851
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/785 (46%), Positives = 514/785 (65%), Gaps = 31/785 (3%)
Query: 44 HWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTK 103
+ H G AA A+ + G P T +V GLCRF + +L Y A + L+ +
Sbjct: 75 NLHRIGTAALAVQVV-GSNWPKPHYTLLVT--GLCRFQILQLLKEKPYPVAEVQQLDRLE 131
Query: 104 IEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASF 163
+ + + LS QF A++L+ +L+ + + LL+++P L DI +
Sbjct: 132 QFTNGHKSEEELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSII 191
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ +E+L +LD+V L+ R L+ R ++ + K+ QK K + +
Sbjct: 192 RTTNQEKLQILDAVRLEERFKMTIPLLVRQIEGL----KLLQKTRKSKQDDDKRVVAIRP 247
Query: 224 MRAIKE----ELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYT 279
R I E + ++D DD+V LE+K++++ M K KE++RLKKM P Y
Sbjct: 248 NRRISHGSITEDEEEEEDHDDVVILEKKIRTSSMSEQALKVCLKEIKRLKKMPQSMPEYA 307
Query: 280 SSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDAR 339
+R YLEL+ +LPW K++++ L+++AA+ LD+DHY + ++K+R++EYLAVR+LK + +
Sbjct: 308 LTRNYLELMVELPWNKSTKD-RLEIRAARIVLDNDHYAMEKLKKRVLEYLAVRQLKNNLK 366
Query: 340 GPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLID 399
GP+LCFVGPPGVGKTS+ SIA LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+
Sbjct: 367 GPILCFVGPPGVGKTSVGRSIAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIIN 426
Query: 400 GLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIF 459
GLK VGV NPV LLDE+DK ++GDPA+ALLEVLDPEQN +F DHYLNV FDLS+V+F
Sbjct: 427 GLKTVGVNNPVFLLDEVDKLAKSLQGDPAAALLEVLDPEQNHSFTDHYLNVAFDLSQVLF 486
Query: 460 VATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAM 519
+ATAN IPP LLDRMEVI++PGYT EEK+ IA RHLIP+ L+ HGL + +QIP+
Sbjct: 487 IATANTTATIPPALLDRMEVIQVPGYTQEEKIEIAHRHLIPKQLELHGLTPQQIQIPQVT 546
Query: 520 VKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLA 579
+I RYTREAGVR L+R L A+ RA AVKVAE + ++A P +V
Sbjct: 547 TLGIITRYTREAGVRALDRKLGAICRAVAVKVAEGQHKEAKPDRAEV------------G 594
Query: 580 DGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAA 635
+G + + E + +S+T + P+++D L+ +LGPP + D E +ER+
Sbjct: 595 EGEDCK-EHVTEDAKPESISDTADLALPPEMPILIDFHALKDILGPPMY-DMEVSERLNQ 652
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R+ A QL
Sbjct: 653 PGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKRYQL 712
Query: 696 VAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTL 754
G +LL DIH+HFPAGAV KDGPSAGVT+ T L SLFS + V +D AMTGE+TL
Sbjct: 713 TNASGNFDLLDNTDIHLHFPAGAVTKDGPSAGVTIATCLASLFSGRLVCSDVAMTGEITL 772
Query: 755 RGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQ 814
RGLVLPVGG+KDK+LAAHR G+KR+I+P+RN KDL E+PA V L +LA +++VL
Sbjct: 773 RGLVLPVGGIKDKVLAAHRAGLKRIIIPQRNEKDLEEIPAHVRQDLTFVLAACLDEVLNA 832
Query: 815 AFEGG 819
AF+GG
Sbjct: 833 AFDGG 837
>gi|332227797|ref|XP_003263075.1| PREDICTED: lon protease homolog 2, peroxisomal isoform 1 [Nomascus
leucogenys]
Length = 850
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/793 (46%), Positives = 518/793 (65%), Gaps = 29/793 (3%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ G+CRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGVCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++L+ +L+ + + LL+++P
Sbjct: 121 IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPR 180
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
L DI + S +E+L +LD+V L+ R L+ R ++ +++ +K T+K +
Sbjct: 181 EALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPLLVRQIEGLKLLQK-TRKPKQDDD 239
Query: 213 KSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQ 272
K +++ I L D D+D DD+V LE+K++++ MP K KE++RLKKM
Sbjct: 240 KRVIAIRPIRRITHISGTLEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMP 299
Query: 273 PQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVR 332
P Y +R LE + +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLAVR
Sbjct: 300 QSMPEYALTRNDLEPMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLEYLAVR 358
Query: 333 KLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGS 392
+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GS
Sbjct: 359 QLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGS 418
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
MPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV F
Sbjct: 419 MPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAF 478
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLS+V+F+ATAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL +
Sbjct: 479 DLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQ 538
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDVHRLGS 571
+QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE Q +E L S R G
Sbjct: 539 IQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVTEREGC 598
Query: 572 PLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDR 627
E I E +S T + P+++D L+ +LGPP + +
Sbjct: 599 --------------REHILEDEKPESISETTDLALPPEMPILIDFHALKDILGPPMY-EM 643
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R
Sbjct: 644 EVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLR 703
Query: 688 ARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADT 746
+ A QL G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D
Sbjct: 704 SNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDV 763
Query: 747 AMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAK 806
AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L + A
Sbjct: 764 AMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTAS 823
Query: 807 RMEDVLEQAFEGG 819
+++VL AF+GG
Sbjct: 824 CLDEVLNAAFDGG 836
>gi|403292626|ref|XP_003937336.1| PREDICTED: lon protease homolog 2, peroxisomal [Saimiri boliviensis
boliviensis]
Length = 794
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/763 (47%), Positives = 499/763 (65%), Gaps = 31/763 (4%)
Query: 70 YIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMEL 129
Y +++ GLCRF + ++ Y A + L+ + + + LS QF A++L
Sbjct: 26 YTLLITGLCRFQIVQVLKEKPYPIAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQL 85
Query: 130 ISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATEL 189
+ +L+ + + LL+++P L DI + S +E+L +LD+V L+ R L
Sbjct: 86 VEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLEERFKMTIPL 145
Query: 190 VDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVAL 244
+ R ++ + K+ QK K + + +R I G D+D DD+V L
Sbjct: 146 LVRQIEGL----KLLQKTRKPKQDDDKRVIAIRPIRRITHIPGTLEDEDEDEDNDDIVML 201
Query: 245 ERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDL 304
E+K++++ MP K KE++RLKKM P Y +R YLEL+ +LPW K++ + LD+
Sbjct: 202 EKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDI 260
Query: 305 KAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASAL 364
+AA+ LD+DHY + ++K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A L
Sbjct: 261 RAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTL 320
Query: 365 GRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVR 424
GR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++
Sbjct: 321 GREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQ 380
Query: 425 GDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPG 484
GDPA+ALLEVLDPEQN F DHYLNV FDLS+V+F+ATAN IP LLDRME+I++PG
Sbjct: 381 GDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVPG 440
Query: 485 YTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALA 544
YT EEK+ IA RHLIP+ L+QHGL + +QIP+ +I RYTREAGVR+L+R L A+
Sbjct: 441 YTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAIC 500
Query: 545 RAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRI 604
RA AVKVAE + ++A DV EV E I E +S+T +
Sbjct: 501 RAVAVKVAEGQPKEAKLERSDVAE-------------REVCREHILEDEKPESISDTADL 547
Query: 605 T----SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
P+++D L+ +LGPP + + E ++R++ PG+++GL WT GGE+ FVEA+ M
Sbjct: 548 ALPPEMPILIDFHALKDILGPPMY-EMEVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMD 606
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVP 719
G+G+L LTGQLGDV+KESA +A++W+R+ A QL G +LL DIH+HFPAGAV
Sbjct: 607 GEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVT 666
Query: 720 KDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRV 779
KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+V
Sbjct: 667 KDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQV 726
Query: 780 ILPERNLKDLVEVPAAV--LASLEIILAKRMEDVLEQAFEGGC 820
I+P RN KDL VP + L I+ + V +Q F+ C
Sbjct: 727 IIPRRNEKDLEGVPGNIEELLPKSIVAYDHLAQVGKQNFQLAC 769
>gi|449282413|gb|EMC89246.1| Peroxisomal Lon protease like protein 2, partial [Columba livia]
Length = 825
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/784 (46%), Positives = 512/784 (65%), Gaps = 43/784 (5%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G AA A+ + G P + Y +++ GLCRF + +L Y A + L+ ++E
Sbjct: 61 HRIGTAALAVQVV-GSNWP--KPHYTLLVTGLCRFQILQLLKEKPYPVAEVEQLD--RLE 115
Query: 106 MEQVEQDPD--FIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASF 163
+Q P+ LS Q A++L+ +L+ + + LL+++P L DI +
Sbjct: 116 QFTNQQKPEEGLGELSEQCYKYAVQLVEMLDMSVPAVAKLRHLLDSLPREALPDILTSII 175
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
S +E+L +LD+V L VR + +L+ QK K + +
Sbjct: 176 RTSNQEKLQILDAVQLLVRQIEGLKLL--------------QKTRKPKQDDDKRVVAIRP 221
Query: 224 MRAIKE----ELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYT 279
R I + ++D+DD+V LE+K++++ M K KE++RLKKM P Y
Sbjct: 222 NRRINHIPSTTEDEEEEDQDDVVMLEKKIRASSMSEQALKVCLKEIKRLKKMPQSMPEYA 281
Query: 280 SSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDAR 339
+R YLEL+ +LPW K++++ L+++AA+ LD+DHY + ++K+R++EYLAVR+LK + +
Sbjct: 282 LTRNYLELMVELPWNKSTKD-RLEIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLK 340
Query: 340 GPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLID 399
GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+
Sbjct: 341 GPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIIN 400
Query: 400 GLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIF 459
GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN +F DHYLNV FDLS+V+F
Sbjct: 401 GLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHSFTDHYLNVAFDLSQVLF 460
Query: 460 VATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAM 519
+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL + +QIP+
Sbjct: 461 IATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVT 520
Query: 520 VKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLA 579
+I RYTREAGVR+L+R L A+ RA AVKVAE + + A P + A
Sbjct: 521 TLDIITRYTREAGVRSLDRRLGAICRAVAVKVAEGQHKDAKPDRAEG------------A 568
Query: 580 DGAEVEMEVIPMG--ESTHEVSN-TFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAP 636
DG + + V ES + ++ P+++D L+ +LGPP + + E +ER++ P
Sbjct: 569 DGEDCKEHVAEDAKPESIGDAADLALPPEMPILIDFHALKDILGPPMY-EMEVSERLSQP 627
Query: 637 GISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLV 696
G+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R+ A QL
Sbjct: 628 GVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKRYQLT 687
Query: 697 AEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
G +LL DIH+HFPAGAV KDGPSAGVT+ T L SLFS + V +D AMTGE+TLR
Sbjct: 688 NASGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIATCLASLFSGRLVCSDVAMTGEITLR 747
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
GLVLPVGG+KDK+LAAHR G+KR+I+P RN KDL E+ V L ++A +++VL A
Sbjct: 748 GLVLPVGGIKDKVLAAHRAGLKRIIIPRRNEKDLEEIAVNVRQDLTFVMASCLDEVLNAA 807
Query: 816 FEGG 819
F+GG
Sbjct: 808 FDGG 811
>gi|21739707|emb|CAD38889.1| hypothetical protein [Homo sapiens]
Length = 715
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/713 (49%), Positives = 481/713 (67%), Gaps = 31/713 (4%)
Query: 118 LSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSV 177
LS QF A++L+ +L+ + + LL+++P L DI + S +E+L +LD+V
Sbjct: 9 LSEQFYKYAVQLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAV 68
Query: 178 DLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD---- 233
L+ R L+ R ++ + K+ QK K + + +R I G
Sbjct: 69 SLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQDDDKRVIAIRPIRRITHISGTLEDE 124
Query: 234 -NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D+D DD+V LE+K++++ MP K KE++RLKKM P Y +R YLEL+ +LP
Sbjct: 125 DEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELP 184
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W K++ + LD++AA+ LD+DHY + ++K+R++EYLAVR+LK + +GP+LCFVGPPGVG
Sbjct: 185 WNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVG 243
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV L
Sbjct: 244 KTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFL 303
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV FDLS+V+F+ATAN IP
Sbjct: 304 LDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPAA 363
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL + +QIP+ +I RYTREAG
Sbjct: 364 LLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAG 423
Query: 533 VRNLERNLAALARAAAVKVAE-QEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPM 591
VR+L+R L A+ RA AVKVAE Q +E L S R G E I
Sbjct: 424 VRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVTEREGC--------------REHILE 469
Query: 592 GESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
E +S+T + P+++D L+ +LGPP + + E ++R++ PG+++GL WT
Sbjct: 470 DEKPESISDTTDLALPPEMPILIDFHALKDILGPPMY-EMEVSQRLSQPGVAIGLAWTPL 528
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLLQG 706
GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R+ A QL G +LL
Sbjct: 529 GGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSFDLLDN 588
Query: 707 RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKD 766
DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KD
Sbjct: 589 TDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKD 648
Query: 767 KILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
K+LAAHR G+K+VI+P RN KDL +P V L + A +++VL AF+GG
Sbjct: 649 KVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGG 701
>gi|262197966|ref|YP_003269175.1| ATP-dependent protease La [Haliangium ochraceum DSM 14365]
gi|262081313|gb|ACY17282.1| ATP-dependent protease La [Haliangium ochraceum DSM 14365]
Length = 812
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/768 (46%), Positives = 491/768 (63%), Gaps = 74/768 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G AAR L + + + + V+L+G+ RF + E + A++ ++ +
Sbjct: 80 GCAARILKVIK-----LAKDNFSVILQGVSRFEIHEFEGAEPFLAAKVEAVP------DP 128
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETV--PIHKLADIFVASFEIS 166
D + AL K A ++ ++ + K G L+++V P H LAD+ ++ E+
Sbjct: 129 TTSDVELDALVMNLKDIAKRVVKLMPELPKEAG---ALVDSVTEPGH-LADLITSNLELE 184
Query: 167 FEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRA 226
E+ +L++ DLK R+ K + + R L+ ++V E+I +V+ ++ ++Q+E++LRQQ++A
Sbjct: 185 VSEKQEVLETFDLKTRMRKVLQFLSRQLEVLKVRERINTQVQEEMGRNQREYVLRQQLKA 244
Query: 227 IKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLE 286
IKEELG+ D+ DL + K+ A MP K +K+ RLK MQP YT +R YLE
Sbjct: 245 IKEELGELDEGGSDLEEFQEKIAKADMPEEAEKVARKQYDRLKGMQPSSAEYTVTRTYLE 304
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
+ +LPW ++E+ ++L + L+ DHY L +VK+RI+EY+AVRKLK D +GP+LC
Sbjct: 305 WLVELPWAISTED-KIELDEVRRVLNEDHYDLEKVKKRIVEYMAVRKLKDDKKGPILCLA 363
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTSL S+A A+GRKF+RISLGGV+DEA+IRGHRRTY+GS+PGRLI G+K+ G
Sbjct: 364 GPPGVGKTSLGRSVARAIGRKFVRISLGGVRDEAEIRGHRRTYVGSLPGRLIQGIKKAGT 423
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NPV +LDEIDK G D RGDPASALLEVLDPEQN TF+DHYL VPFDLSKV+F+ATAN+
Sbjct: 424 NNPVFVLDEIDKLGHDFRGDPASALLEVLDPEQNNTFSDHYLEVPFDLSKVMFIATANQL 483
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
PIP L DR+E+IELPGYT +EK +IA + L+P+ L +HG+ E ++ + + +I
Sbjct: 484 DPIPWALRDRLEIIELPGYTRQEKAQIARKFLVPKQLSEHGIQDEHCEVTDEAIYEIIDS 543
Query: 527 YTREAGVRNLERNLAALARAAAVKVAE--QEQEQALPSSKDVHRLGSPLLDNRLADGAEV 584
YTREAGVRNLER L ++ R AVKVAE E ++ L + K LG+ + +AD
Sbjct: 544 YTREAGVRNLERELGSVCRGVAVKVAEGTAEDKEILNAEKVREYLGAAKHVSEVAD---- 599
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
R A PG++ GL W
Sbjct: 600 -----------------------------------------------RTAEPGVATGLAW 612
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GG++ F+EAT M GKG+L LTGQLGDV+KES AL+++R+RA L L +G N L
Sbjct: 613 TAVGGDILFIEATRMPGKGKLTLTGQLGDVMKESVTAALSFIRSRAPQLGL---EGGNFL 669
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
+ D+H+H PAG +PKDGPSAGVT+ TALVSL + VR D AMTGE+TLRG VL VGGV
Sbjct: 670 ENTDLHVHVPAGGIPKDGPSAGVTMYTALVSLLIQTPVRPDVAMTGEITLRGNVLQVGGV 729
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
K+K+LAAHR GIKRVI+P+RN+KDL +VP V +EI+ AKRM++VL
Sbjct: 730 KEKLLAAHRAGIKRVIIPDRNMKDLTDVPDEVKEEMEILPAKRMDEVL 777
>gi|334311785|ref|XP_003339659.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Monodelphis
domestica]
Length = 866
Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/705 (49%), Positives = 481/705 (68%), Gaps = 31/705 (4%)
Query: 126 AMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSK 185
A+ L+ +L+ + + LL+++P L DI + S +E+L +LD+V L+ R
Sbjct: 168 AIPLVEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDAVSLEERFKM 227
Query: 186 ATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD-----NDDDEDD 240
L+ R ++ + K+ QK K + + +R I G ++D DD
Sbjct: 228 TIPLLVRQIEGL----KLLQKTRKHKQDDDKRVIAIRPIRRITHIPGTLEDEDEEEDNDD 283
Query: 241 LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI 300
+V LE+K++++ MP K KE++RLKKM P Y +R YLEL+ +LPW K++ +
Sbjct: 284 IVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNKSTTD- 342
Query: 301 DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 360
LD++AA+ LD+DHY + ++K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS+ S+
Sbjct: 343 RLDIRAARILLDNDHYAMDKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSV 402
Query: 361 ASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTG 420
A LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G
Sbjct: 403 AKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLG 462
Query: 421 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVI 480
++GDPA+ALLEVLDPEQN F DHYLNV FDLS+V+F+ATAN IPP LLDRME+I
Sbjct: 463 KSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPPALLDRMEII 522
Query: 481 ELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNL 540
++PGYT EEK+ IA RHLIP+ L+QHGL + +QIP+ +I RYTREAGVR+L+R
Sbjct: 523 QVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKF 582
Query: 541 AALARAAAVKVAE-QEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVS 599
A+ RA AVKVAE Q ++ L ++ G L + A+ E +S
Sbjct: 583 GAICRAVAVKVAEGQHKDTKLERTEGTEGEGC---REHLLEDAKPE-----------SIS 628
Query: 600 NTFRIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
+T + P+++D L+ +LGPP + + E +ER++ PG+++GLVW+ GGE+ FVE
Sbjct: 629 DTADLALPPEMPILIDFHALKDILGPPMY-EMEVSERLSQPGVAIGLVWSPLGGEIMFVE 687
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFP 714
A+ M G+G+L LTGQLGDV+KESA +A++W+R+ A L G +LL DIH+HFP
Sbjct: 688 ASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYHLTNASGSFDLLDNTDIHLHFP 747
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
AGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR
Sbjct: 748 AGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRA 807
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
G+KR+I+P+RN KDL E+P+ V L I A +++VL AF+GG
Sbjct: 808 GLKRIIIPQRNEKDLEEIPSNVRQDLTFITATCLDEVLNAAFDGG 852
>gi|444718951|gb|ELW59754.1| Lon protease like protein 2, peroxisomal [Tupaia chinensis]
Length = 1016
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/811 (44%), Positives = 506/811 (62%), Gaps = 78/811 (9%)
Query: 70 YIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMEL 129
Y +++ GLCRF + ++ Y A + L+ + + + LS QF A++L
Sbjct: 209 YTLLITGLCRFQIIQVLKEKPYPVAEVEQLDRLEEFPNTCKTREELGELSEQFYKYAVQL 268
Query: 130 ISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATEL 189
+ +L+ + + LL+++P L DI + S +E+L +LDSV L+ L
Sbjct: 269 VEMLDMSVPAVAKLRRLLDSLPREALPDILTSIIRTSNKEKLQILDSVSLEELFKMTIPL 328
Query: 190 VDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVAL 244
+ R ++ + K+ QK K + + +R I G D+D DD+V L
Sbjct: 329 LVRQIEGL----KLLQKTRKPKQDDDKRVIAIRPIRKITHIPGTLEDEDEDEDNDDIVML 384
Query: 245 ERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEE----- 299
E+K++++ MP K KEL+RLKKM P Y +R YLEL+ +LPW K++ +
Sbjct: 385 EKKVRTSSMPEQAHKVCVKELKRLKKMPQSMPEYALTRNYLELMVELPWNKSTTDRLDIR 444
Query: 300 ---------------------------------------------ID-LDLKAAKERLDS 313
+D LD++AA+ LD+
Sbjct: 445 AARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVDRLDIRAARILLDN 504
Query: 314 DHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISL 373
DHY + ++K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+L
Sbjct: 505 DHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIAL 564
Query: 374 GGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLE 433
GGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLE
Sbjct: 565 GGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLE 624
Query: 434 VLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRI 493
VLDPEQN F DHYLNV FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ I
Sbjct: 625 VLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEI 684
Query: 494 AMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE 553
A RHLIP+ L+QHGL + +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE
Sbjct: 685 AHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKFGAICRAVAVKVAE 744
Query: 554 QEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLV 609
+ ++A DV G + + + A+ E +S+T + P++
Sbjct: 745 GQHKEAKLDRSDVTE-GEGCREQHILEDAKPE-----------SISDTTDLALPPEMPIL 792
Query: 610 VDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTG 669
+D L+ +LGPP + + + +ER++ PG+++GL WT GGE+ FVEA+ M G+G+L LTG
Sbjct: 793 IDFHALKDILGPPMY-EMQVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTG 851
Query: 670 QLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVT 728
QLGDV+KESA +A++W+R+ A L G +LL DIH+HFPAGAV KDGPSAGVT
Sbjct: 852 QLGDVMKESAHLAISWLRSNAKKYHLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVT 911
Query: 729 LVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKD 788
+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K++I+P+RN KD
Sbjct: 912 IVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQIIIPQRNEKD 971
Query: 789 LVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
L ++P V L + A +++VL AF+GG
Sbjct: 972 LEKIPGNVRQDLSFVTASCLDEVLNAAFDGG 1002
>gi|162453279|ref|YP_001615646.1| ATP-dependent protease La [Sorangium cellulosum So ce56]
gi|161163861|emb|CAN95166.1| ATP-dependent protease La [Sorangium cellulosum So ce56]
Length = 817
Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/771 (45%), Positives = 507/771 (65%), Gaps = 71/771 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G AAR L + ++ SG Y ++L+GL R + ++ Y A+I ++ E
Sbjct: 85 GCAARVL---KALKHSSG--NYSLILQGLTRIRLDSVTAHTPYLRAKIRRMD------EP 133
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI-HKLADIFVASFEISF 167
+D + AL+ + A ++I ++ + + G L++++ LAD+ A+ +
Sbjct: 134 ATEDVEAEALAMSLRDIAKQVIQLMPELPREAGS---LIDSIQAPGALADLVAANLDAPV 190
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
EE+ +++++D+K R+ K L+ R L+ +++ E+I +++ ++ K+Q+E++LRQQ++AI
Sbjct: 191 EEKAQLIETIDVKERIRKVLRLLTRQLEILKMRERINSQIKEEMGKNQREYVLRQQLKAI 250
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
KEELG++D D+ DL LE ++ A +P+ +K+L+RL+ MQ YT R YL+
Sbjct: 251 KEELGEDDGDQGDLDGLEDRIAKANLPTEAETVAKKQLKRLRTMQVGSAEYTVVRTYLDW 310
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
I D+PW +++++ +LD+ + ++ LD DHYGL +VK+RI+EYLAVRKLK D +GP+LC +G
Sbjct: 311 ILDVPWTQSTQD-NLDIGSVRKVLDEDHYGLEKVKKRILEYLAVRKLKQDKKGPILCLLG 369
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL SIA ALGRKF R+SLGGV DEA IRGHRRTY+G++PG++I G+K+ G
Sbjct: 370 PPGVGKTSLGRSIARALGRKFHRVSLGGVHDEAAIRGHRRTYVGALPGQIIQGMKKSGTI 429
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV ++DE+DK G D RGDP++ALLEVLDPEQN TF DHYL +P+DLS V+FVATAN A
Sbjct: 430 NPVFMMDEVDKIGHDFRGDPSAALLEVLDPEQNNTFADHYLEIPYDLSHVMFVATANVAD 489
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
PIPPPL DRME++E+PGYT +EKL IA +HL+P+ L +HGL +E L++ + ++ +I Y
Sbjct: 490 PIPPPLRDRMEILEIPGYTRKEKLAIARQHLLPKQLSEHGLTTEQLEVTDKALEEIIDHY 549
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQE-QEQALPSSKDVHRLGSPLLDNRLADGAEVEM 586
TREAGVR+LER +A + R AVKVAE + Q++ + + D+H
Sbjct: 550 TREAGVRSLERQIAGVIRGVAVKVAEGDTQKRRVDNEDDLHEF----------------- 592
Query: 587 EVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTN 646
LGP ++ E AER A G++ GL WT+
Sbjct: 593 --------------------------------LGPAKYTS-EVAERTAESGVATGLAWTS 619
Query: 647 FGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQG 706
GGE+ F+EAT M G G+L LTGQLGDV+KESAQ AL++VR+ A+ + + L+
Sbjct: 620 VGGEILFIEATRMYGTGKLQLTGQLGDVMKESAQAALSFVRSNASRYSI----AKDFLEK 675
Query: 707 RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKD 766
D+HIH PAGA+PKDGPSAGVT+ TALVSL + +VR D AMTGE+TLRG VLP+GG+K+
Sbjct: 676 SDLHIHIPAGAMPKDGPSAGVTMFTALVSLLTGIKVRHDVAMTGEITLRGRVLPIGGLKE 735
Query: 767 KILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
K+LAAHR GIKR+I+PERN DL EVP V+ L+ RME VLE A E
Sbjct: 736 KVLAAHRAGIKRIIVPERNRADLEEVPKEVVDELQFFFVSRMEQVLEAALE 786
>gi|384494066|gb|EIE84557.1| ATP-dependent protease La [Rhizopus delemar RA 99-880]
Length = 820
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/803 (45%), Positives = 512/803 (63%), Gaps = 70/803 (8%)
Query: 26 ASKVQVGASDGKNQ-QEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQE 84
SK S+G Q Q+ N G AR L ++R +G + + +EG+ RF ++
Sbjct: 59 TSKSTTNESEGAIQLQDKDRLFNYGCVARILRVTR-----AGLGAFTLFIEGVARFKAKD 113
Query: 85 LSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQ---KQKTGG 141
+ + AR+S + +I + D D I +FKA E +S +++ Q
Sbjct: 114 VYMQENRLHARVSYVSTQEIS----DTDDDMI----RFKALVQEFLSKMQELQMPQSLFQ 165
Query: 142 RTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAE 201
+ LL +VP LAD+ + E SF+E+L ML +D+K R+ K + + R L ++++E
Sbjct: 166 QLTKLLGSVPSSGLADLLMTVIETSFDEKLSMLAILDIKERIEKVSGWMTRQLHMLKISE 225
Query: 202 KITQKVEGQLSKSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSN 256
++ VE +LSK+ +EF LRQQ+ AIK+ELG+ DED++ +L RK++ G+P
Sbjct: 226 QVHSSVENKLSKTHREFYLRQQLEAIKKELGEPSSASESKDEDEIESLGRKLEEKGLPEE 285
Query: 257 IWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHY 316
++ Q+EL+RLKK+QP Y+ +R YLEL+ADLPW K + ++ +D+K K++L+ DH+
Sbjct: 286 VYTIAQRELKRLKKLQPTTSEYSVARNYLELLADLPWNKKTTDM-IDIKKTKKKLEQDHF 344
Query: 317 GLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGV 376
GL VK+RIIEYL+V K+K + + P++CFVGPPGVGKTSL SIAS+LGR+F R+SLGG+
Sbjct: 345 GLKHVKKRIIEYLSVIKIKGNLKAPIICFVGPPGVGKTSLGKSIASSLGREFHRVSLGGI 404
Query: 377 KDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK-TGSDVRGDPASALLEVL 435
+DEAD+RGHRRTY+G+MPG ++ GL++ V NP+ LLDEIDK + S GDPA+ALLEVL
Sbjct: 405 RDEADVRGHRRTYVGAMPGLIVQGLRKCKVNNPLFLLDEIDKLSHSTHYGDPAAALLEVL 464
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN +F DHYLNVPFDLS V+F+ATAN IP PLLDRMEVI L GYT EEKL I
Sbjct: 465 DPEQNDSFTDHYLNVPFDLSNVLFIATANSLDTIPEPLLDRMEVITLNGYTFEEKLYITK 524
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
HL+P+ L HGL +++ + ++ + + YTRE+GVR+LER +A++ RA V +A
Sbjct: 525 SHLLPKQLAIHGLQMNHIKMSDEVLLKIAESYTRESGVRSLERTIASIVRAKCVILA--- 581
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
S ++ R E E P V + +
Sbjct: 582 ------SLRECQR----------------EREYDPN------------------VTLSDI 601
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFG-GEVQFVEATAMRGKGELHLTGQLGDV 674
E++LG + ++E AER A PG+ GL ++ G G + FVE+T M G G LHLTG LG+V
Sbjct: 602 EEILGMAYY-EKEIAEREAMPGVVTGLAYSGSGHGGILFVESTKMPGHGNLHLTGSLGEV 660
Query: 675 IKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALV 734
IKES ++ALTWV++ A L+LV +L++ DIHIH P GAVPKDGPSAGVTLVT+LV
Sbjct: 661 IKESGKLALTWVKSNAYALKLVPAKDSDLIEKHDIHIHVPGGAVPKDGPSAGVTLVTSLV 720
Query: 735 SLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDL-VEVP 793
SLFS V A TAMTGE++LRG VLPVGG+K+K+++AHR GI+++ILP RN KD+ +VP
Sbjct: 721 SLFSGYHVPATTAMTGEISLRGQVLPVGGIKEKVVSAHRAGIRKIILPFRNRKDVRQDVP 780
Query: 794 AAVLASLEIILAKRMEDVLEQAF 816
+ +E AK + +VLE A
Sbjct: 781 DKLKKDIEFTYAKNIWEVLEAAL 803
>gi|328768691|gb|EGF78737.1| hypothetical protein BATDEDRAFT_12969 [Batrachochytrium
dendrobatidis JAM81]
Length = 645
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/683 (50%), Positives = 464/683 (67%), Gaps = 50/683 (7%)
Query: 146 LLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQ 205
+L++ P +LAD+F + +++ +E+L +L+ VDLK RL+K L++R LQ +++++K+
Sbjct: 1 MLQSTPPGQLADLFTSMIDLTLDEKLEILEMVDLKPRLTKVILLLNRQLQVLKISQKLQS 60
Query: 206 KVEGQLSKSQKEFLLRQQMRAIKEELGDNDD--DEDDLVALERKMQSAGMPSNIWKHVQK 263
V+ +L + Q+EFLLR+Q+ AIK+ELG+NDD D DD+V L +++ + +P + Q+
Sbjct: 61 TVQNRLGQKQREFLLREQLEAIKKELGENDDGKDADDVVDLTKRIAESKLPEEPLRAAQR 120
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL+RL +M P Y R YLE +A+LPW + + + +LD+ A+ LD DH+GL RVK
Sbjct: 121 ELKRLSRMNPNMSEYQVIRTYLEWMAELPWSQKTPD-NLDISHARGILDHDHHGLDRVKL 179
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
R+IEYLAVRKLK D RGP+LC VGPPGVGKTSL SIA+ALGRKF RISLGG+ DEA+IR
Sbjct: 180 RVIEYLAVRKLKQDLRGPILCLVGPPGVGKTSLGKSIANALGRKFHRISLGGIHDEAEIR 239
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTY+GS+PG ++ GL++ GV NPV+LLDEIDK G D RGDP+SALLEVLDPEQN TF
Sbjct: 240 GHRRTYLGSLPGLIVQGLRQCGVNNPVLLLDEIDKLGHDYRGDPSSALLEVLDPEQNSTF 299
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
DHYL VPF+LS V+F+ATAN IP PLLDRMEV+++ GYT +EKL IA ++L+P+ +
Sbjct: 300 TDHYLGVPFNLSNVLFIATANDMDTIPAPLLDRMEVVQISGYTVDEKLSIARQYLLPKQI 359
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
HGL + ++I + ++ + YTREAGVR+LER +AA+ R+ AV+ + ++
Sbjct: 360 HAHGLAEDHVKINDTLLLKIATGYTREAGVRHLEREIAAVCRSLAVEYSILKET------ 413
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPR 623
G E I E LE +LG R
Sbjct: 414 -----------------GREAVFNGIMAAEK--------------------LESILGVER 436
Query: 624 FDDREAAERVAAPGISVGLVWTNFG-GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
FDD E +ER PGI GL WT+ G G + F+E+T G G+LHLTG+LGDVIKESAQI
Sbjct: 437 FDD-EVSERTGVPGIVTGLAWTSTGSGGLLFIESTCTPGSGKLHLTGKLGDVIKESAQIG 495
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
+TWVRA A L + NL + DIH+HFP+GA+ KDGPSAGV++VT+LVSL ++ V
Sbjct: 496 VTWVRANADALGIHGTH-KNLFEDTDIHVHFPSGAISKDGPSAGVSIVTSLVSLLTKSVV 554
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV-EVPAAVLASLE 801
R TAMTGE+TLRG VLPVGG+K+KILAAHR GIK+VI+P RN KD++ ++P V ++
Sbjct: 555 RNHTAMTGEITLRGQVLPVGGIKEKILAAHRGGIKQVIVPYRNQKDVISDIPDRVKREMQ 614
Query: 802 IILAKRMEDVLEQAFEGGCPWRQ 824
+ AK + DVL AF + Q
Sbjct: 615 FVYAKSIWDVLGAAFPEQVQYEQ 637
>gi|149917792|ref|ZP_01906287.1| ATP-dependent protease La [Plesiocystis pacifica SIR-1]
gi|149821312|gb|EDM80714.1| ATP-dependent protease La [Plesiocystis pacifica SIR-1]
Length = 794
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/775 (46%), Positives = 502/775 (64%), Gaps = 71/775 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H+ G A R L + + R Y V+L+G+ R V+EL + AR++ E+ + E
Sbjct: 76 HSVGCAVRILKVIK-----LARDNYSVILQGVMRIRVEELVADEPFLQARVT--ELPETE 128
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFE 164
+VE + A+ K TA +LIS++ + + LL++V ++AD+ ++ +
Sbjct: 129 PSRVESE----AMVANIKETAKKLISLVPELPREAA---ALLDSVTEPGQVADLVASNLD 181
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
I E+ +L++ D+ VRL K L+ R L+ + + E+I +V+ ++ SQ+E++LRQQ+
Sbjct: 182 IEPNEKQEVLEAFDVGVRLRKVLTLLTRQLEILEIRERINTQVQEEMGHSQREYVLRQQL 241
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+AIK ELG+ DD+ D E+K+ A MP K K+L RLK+MQP YT +R Y
Sbjct: 242 KAIKGELGEIDDENADADEFEQKIAEAKMPEEAEKAAFKQLNRLKQMQPSSAEYTVTRTY 301
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
LE + DLPW K++E+ L++ ++ L+ DHY L +VK+RI+EY+AV KL +GP+LC
Sbjct: 302 LEWLTDLPWSKSTED-QLEIGMVRDVLNEDHYDLEKVKKRILEYMAVLKLNASKKGPILC 360
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
GPPGVGKTSL S+A A+GR F+RISLGGV+DEA+IRGHRRTY+GS+PGR+I LKR
Sbjct: 361 LAGPPGVGKTSLGKSVARAIGRSFVRISLGGVRDEAEIRGHRRTYVGSLPGRIIQALKRA 420
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G NPV++LDEIDK G D RGDPASALLEVLDPEQN TF+DHYL V FDLS+V+F+ATAN
Sbjct: 421 GTNNPVIVLDEIDKLGHDFRGDPASALLEVLDPEQNHTFSDHYLEVTFDLSRVMFIATAN 480
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI--PEAMVKL 522
PIPP L DR+E++ELPGYT +EK IA R L+P+ + +HGL + L++ E V
Sbjct: 481 TIDPIPPALRDRLEILELPGYTRQEKAAIAKRFLLPKQISEHGLTRDDLEVDFSEGAVME 540
Query: 523 VIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGA 582
+I YTREAGVRNL+R ++++ R AVK E E ++
Sbjct: 541 LIDSYTREAGVRNLQREISSVVRGVAVKFVEGE----------------------VSGKV 578
Query: 583 EVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGL 642
+E E IP + LGP ++ E A+R A+PG++ GL
Sbjct: 579 TIEAEQIP--------------------------EFLGPQKYIP-EMADRTASPGVATGL 611
Query: 643 VWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN 702
WT GGE+ F+EAT+M GKG L LTGQLGDV+KESAQ A++++++ DL + +
Sbjct: 612 AWTPTGGEIMFIEATSMPGKGGLMLTGQLGDVMKESAQAAMSYLKSHLEDLGI----DKD 667
Query: 703 LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVG 762
L GRDIHIH PAGA+PKDGPSAGV + +ALVSL + + +R+D AMTGE+TLRGLVLPVG
Sbjct: 668 ALDGRDIHIHVPAGAIPKDGPSAGVAIFSALVSLLTGRCIRSDVAMTGEITLRGLVLPVG 727
Query: 763 GVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
G+K+K+L AHR GI+R+ LPERN KD+V+VP + + +EII AK + +VL +A E
Sbjct: 728 GIKEKLLGAHRAGIRRIFLPERNEKDVVDVPEEIRSEIEIIYAKAVHEVLGRALE 782
>gi|373456915|ref|ZP_09548682.1| anti-sigma H sporulation factor, LonB [Caldithrix abyssi DSM 13497]
gi|371718579|gb|EHO40350.1| anti-sigma H sporulation factor, LonB [Caldithrix abyssi DSM 13497]
Length = 775
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/746 (45%), Positives = 484/746 (64%), Gaps = 63/746 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
++++GL RF + E++ ++ A+I + ++ D + AL K +++
Sbjct: 93 IIVQGLYRFRLVEMTQTEPFFVAKIQQMP------DEFVTDMEVEALVNNIKNVFQKVVD 146
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
+ T ++L T HKLAD+ A S E+ +L+ ++K RL K L++
Sbjct: 147 YI--PYLTNEHRVMILNTEEPHKLADLVAAQINFSVSEKQQVLEIQNVKERLKKVNYLIN 204
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ LQ + + KI V+G+L+K+Q+++ LR+Q++AIK+ELG+ +D+ ++ L K+
Sbjct: 205 KELQILELGNKIQNDVQGELNKTQRQYFLREQLKAIKKELGEYEDEGTEIEELREKLAKL 264
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
MP+ + K +KEL RL KM P YT +R YL+ + ++PW+K++ + LD+K A+ L
Sbjct: 265 KMPAEVRKVAEKELNRLAKMSPMASEYTVTRTYLDWLMEMPWKKSTRD-RLDVKEAERIL 323
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
+ DHYGL +VK+RI+EYLAVR+LK D +GP+LCFVGPPGVGKTSL SIA AL RKF R+
Sbjct: 324 NEDHYGLEKVKKRILEYLAVRQLKSDMKGPILCFVGPPGVGKTSLGRSIARALNRKFSRM 383
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGV+DEA+IRGHRRTY+G++PGR+I +K+VG NPV++LDEIDK G D RGDP+SAL
Sbjct: 384 SLGGVRDEAEIRGHRRTYVGALPGRIIQEIKKVGSNNPVIMLDEIDKLGMDFRGDPSSAL 443
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQN +F DHYL VPFDLSKV+F+ATAN IPPPLLDRMEVIE+ GY EEKL
Sbjct: 444 LEVLDPEQNFSFTDHYLEVPFDLSKVMFIATANMIDTIPPPLLDRMEVIEINGYIDEEKL 503
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
IA R+LIP+ L HGL E + + +I RYTREAGVRNLER +A++ R A ++
Sbjct: 504 HIAERYLIPKQLKNHGLTEEQITFTRNAIFKIINRYTREAGVRNLEREIASIVRGVAKEI 563
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
E + ++ RIT LV
Sbjct: 564 VEGKIKKR-------------------------------------------RITPKLV-- 578
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
EK LGP R+ E AERV+ PG++ GL WT GG++ F+EAT M+GKG+L LTG+L
Sbjct: 579 ----EKYLGPERYFS-EVAERVSRPGVATGLAWTPVGGDILFIEATKMKGKGQLQLTGKL 633
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
G+V+KESA A++++R+ A + ED + + D HIH PAGA+PKDGPSAG+T+
Sbjct: 634 GEVMKESASAAMSYLRSNAEKYGI--ED--DFYEKYDTHIHVPAGAIPKDGPSAGITIFA 689
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
AL SL++ K V+ + AMTGE+TLRGLVLPVGG+++K++AA R GI+ VILPE+N KDL E
Sbjct: 690 ALYSLYANKCVKNNLAMTGEITLRGLVLPVGGIREKVIAAKRAGIETVILPEKNKKDLAE 749
Query: 792 VPAAVLASLEIILAKRMEDVLEQAFE 817
+P + ++ K +++++E AFE
Sbjct: 750 IPRRHIEGMKFHFIKEVDELIELAFE 775
>gi|391343326|ref|XP_003745963.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Metaseiulus
occidentalis]
Length = 815
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/762 (46%), Positives = 486/762 (63%), Gaps = 63/762 (8%)
Query: 67 RVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQF---- 122
R TY + + G+CRFS+ E+ Y ++ L+ E+ V L +
Sbjct: 94 RTTYTLQINGVCRFSLDEIVHESPYLIGSVTQLDRLPGEVYSVTSLNLEDPLELELSELL 153
Query: 123 ---KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDL 179
++ A +LI LE + R K L+ ++P + L DI + + EE+L +LD+V L
Sbjct: 154 TETRSLAADLIERLELSSGSAQRYKRLMNSLPSYALPDICTSIVSANHEERLAVLDAVLL 213
Query: 180 KVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDED 239
R+ KA L+ R + S+ K+T+ + ++ K+ Q+ E D D
Sbjct: 214 TDRIRKALPLLRRQINSLEGKVKVTKHKDKIINGLSKDVRRGFQIDDDDAE------DGD 267
Query: 240 DLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEE 299
+++ALE+K++S +P + K KEL RLKKM P P + +R YLEL+ +LPW + S+E
Sbjct: 268 EIMALEKKVKSNDLPEHAKKAALKELSRLKKMPPHMPEHAMTRNYLELLVELPWNRRSQE 327
Query: 300 IDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASS 359
+DL+ +K LD DH+GL ++K+R++EYLAVRKLK +GP+LCFVGPPGVGKTS+ S
Sbjct: 328 -HIDLQKSKIALDHDHFGLEKLKKRVLEYLAVRKLKSQIKGPILCFVGPPGVGKTSVGRS 386
Query: 360 IASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKT 419
IA +LGR+F RISLGGV D+ADIRGHRRTYIGSMPGR+I GLK VGV NPV+LLDEIDK
Sbjct: 387 IAKSLGREFYRISLGGVSDQADIRGHRRTYIGSMPGRIIQGLKTVGVKNPVILLDEIDKM 446
Query: 420 GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEV 479
+ + GDPA+ALLEVLDPEQN +F DHYLN+ FDLS+V+F+ATAN +P LLDRME+
Sbjct: 447 AAGIHGDPAAALLEVLDPEQNSSFTDHYLNISFDLSEVLFIATANTVSTVPGALLDRMEL 506
Query: 480 IELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERN 539
I +PGYT EEK IA HL+P+ L+QHG+ S ++ + ++ +I YTREAGVR LER
Sbjct: 507 ITIPGYTHEEKEHIARDHLLPKQLEQHGILSSMFELTDDAIRKIISSYTREAGVRALERR 566
Query: 540 LAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVS 599
L+A+ RAAAVK+ E A P+ +G
Sbjct: 567 LSAICRAAAVKIVE-----ANPTDLKSGHIG----------------------------- 592
Query: 600 NTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAM 659
+D+ +LE++LGPP F + + R+ PG+++GL WT GGE+ FVEA+ M
Sbjct: 593 ----------IDQEVLEEILGPPLF-EFDIDSRLVQPGVAIGLAWTAVGGEIMFVEASKM 641
Query: 660 RGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVP 719
G G+L LTGQLGDV+KESA +AL W+R A+ L ++++G DIHIHFPAGAV
Sbjct: 642 GGCGQLTLTGQLGDVMKESATLALNWLRINASRFDL----NPDIMEGTDIHIHFPAGAVE 697
Query: 720 KDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRV 779
KDGPSAGVT+ LVSLF+++ V +D AMTGE+TL+GLVLPVGG+K+K+LAAHR G+ RV
Sbjct: 698 KDGPSAGVTIACVLVSLFTQRIVASDVAMTGEITLQGLVLPVGGIKEKVLAAHRCGLSRV 757
Query: 780 ILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
ILP RN ++L E+P V +L LA +EDVL+QAF GG P
Sbjct: 758 ILPRRNRRELQEIPRNVRENLTFYLAGTIEDVLQQAFVGGFP 799
>gi|359319047|ref|XP_003638981.1| PREDICTED: lon protease homolog 2, peroxisomal-like isoform 2
[Canis lupus familiaris]
Length = 808
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/797 (45%), Positives = 498/797 (62%), Gaps = 79/797 (9%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A+++
Sbjct: 121 VAEVEQLDRLEEFPNTCKTREELGELSEQFYKYAVQI----------------------- 157
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
LD+V L+ R L+ R ++ + K+ QK
Sbjct: 158 ---------------------LDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKHKQ 192
Query: 213 KSQKEFLLRQQMRAIKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
K + + +R I G D+D DD+V LERK++++ MP K KE++R
Sbjct: 193 DDDKRVIAIRPIRRITHIPGTLEDDDEDEDNDDIVMLERKIRTSSMPEQAHKVCVKEIKR 252
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 253 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLE 311
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 312 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 371
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 372 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 431
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 432 LNVAFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 491
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE + ++A DV
Sbjct: 492 LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKEAKLDRYDV- 550
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPR 623
A+G E E I +S+T + P+++D L+ +LGPP
Sbjct: 551 -----------AEG-EGGREHILEDAKPESISDTTDLALPPEMPILIDFHALKDILGPPM 598
Query: 624 FDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIAL 683
+ + E +ER++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A+
Sbjct: 599 Y-EMEVSERLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAI 657
Query: 684 TWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
+W+R+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + V
Sbjct: 658 SWLRSNAKKYHLTNASGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLV 717
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+KRVI+P+RN KDL E+P V L
Sbjct: 718 RSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKRVIIPQRNEKDLEEIPGNVRQDLSF 777
Query: 803 ILAKRMEDVLEQAFEGG 819
+ A +++VL AF+GG
Sbjct: 778 VTASCLDEVLNAAFDGG 794
>gi|337286781|ref|YP_004626254.1| ATP-dependent protease La [Thermodesulfatator indicus DSM 15286]
gi|335359609|gb|AEH45290.1| ATP-dependent protease La [Thermodesulfatator indicus DSM 15286]
Length = 798
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/746 (47%), Positives = 486/746 (65%), Gaps = 65/746 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VV++G+ R ++++ + Y ++ L+ +VE + RQ A A+E +
Sbjct: 104 VVVQGVSRIELEDIVSDKPYLKGKVKILDDYLAHDVEVEA---LMVSIRQLFAKALEFLP 160
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
L Q+ KT + L LAD+ + +S +E+ +L+++D+K RL K +L+
Sbjct: 161 QLPQEIKT-----LALGIEEPGALADLVASHLNVSHQEKQEVLETLDVKERLKKIHQLLV 215
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ ++ + + +KI +V G++ K+Q+E+ LR+Q++ I++ELG+ + E ++ L K+
Sbjct: 216 KQIEILELGQKIQDEVRGRMEKAQREYYLREQLKVIRKELGEAEGIEAEIEELREKLAKK 275
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
+P + + +KEL+RL ++ P YT R YL+ I +LPWE+++E+ +DLK AK+ L
Sbjct: 276 KLPDYVREEAEKELKRLARIHPTSAEYTVIRNYLDWILELPWEESTED-HIDLKLAKKIL 334
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHY L +VK+RI+EYLAVRKLKPDA+GP+LCFVGPPGVGKTSL SIA ALGRKF RI
Sbjct: 335 DEDHYNLEKVKKRILEYLAVRKLKPDAKGPILCFVGPPGVGKTSLGRSIAKALGRKFWRI 394
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGV+DEA+IRGHRRTY+G+MPGR+I L+RVGV NPV++LDEIDK G+D RGDPA+AL
Sbjct: 395 SLGGVRDEAEIRGHRRTYVGAMPGRIIQALRRVGVNNPVLMLDEIDKIGADFRGDPAAAL 454
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQNK F+DHYL +PFDLSKVIF+ATAN IP PLLDRMEVIE+PGYT E+KL
Sbjct: 455 LEVLDPEQNKNFSDHYLEIPFDLSKVIFIATANVLDTIPAPLLDRMEVIEIPGYTEEDKL 514
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
+IA +L+PR L+ HGL E L+ + + +I+ YTREAGVRNLER + A+ RA A +
Sbjct: 515 KIAKHYLVPRQLEAHGLTKEQLKFTDRALLQIIRYYTREAGVRNLEREIGAVCRAVAREF 574
Query: 552 AEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
AE E KDV + LG P + +P
Sbjct: 575 AEGRTEPVKVRVKDVEKYLGPP--------------KYLP-------------------- 600
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
E AERV PG+++GL WT GGE+ F+EAT M+G G L LTG+
Sbjct: 601 -----------------EVAERVKVPGVAIGLAWTPVGGEILFIEATKMKGSGRLILTGK 643
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV++ESA+ AL++VR+RA D + ED + DIH+H P+GAVPKDGPSAG+T++
Sbjct: 644 LGDVMRESAEAALSYVRSRAKDFG-IDED---IFSKIDIHVHVPSGAVPKDGPSAGITIL 699
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
ALVSL + + VR D AMTGE+TLRG VLPVGG+K+K+LAA GIK +ILP+ N KDLV
Sbjct: 700 AALVSLLTERTVRHDVAMTGEITLRGTVLPVGGIKEKVLAAKSAGIKEIILPKLNEKDLV 759
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAF 816
EVP V L R+E+ L F
Sbjct: 760 EVPKEVREKLVFHPVSRVEEALPIVF 785
>gi|351709571|gb|EHB12490.1| Peroxisomal Lon protease-like protein 2 [Heterocephalus glaber]
Length = 811
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/799 (44%), Positives = 500/799 (62%), Gaps = 80/799 (10%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIA-------LSRQFKATAMELISVLEQKQKTGGRTKV 145
A + +++++E+ P+ LS QF A++L+ +L+ + +
Sbjct: 121 IAEVE-------QLDRLEEFPNICKTREELGELSEQFYKYAVQLVEMLDMSVPAVAKLRR 173
Query: 146 LLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQ 205
LL+++P L DI + S +E+L ++ +IR +IT
Sbjct: 174 LLDSLPREALPDILTSIIRTSNKEKLQVI---------------------AIRPIRRITH 212
Query: 206 KVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKEL 265
F + +V LE+K++++ MP K KE+
Sbjct: 213 --------IPSTFEDEDDDEDNDD-----------IVMLEKKIRTSSMPEQAHKVCVKEI 253
Query: 266 RRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRI 325
+RLKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LDSDHY + ++K+R+
Sbjct: 254 KRLKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARVLLDSDHYAMEQLKKRV 312
Query: 326 IEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGH 385
+EYLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++D+RGH
Sbjct: 313 LEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDVRGH 372
Query: 386 RRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFND 445
RRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F D
Sbjct: 373 RRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTD 432
Query: 446 HYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQ 505
HYLNV FDLS+V+F+ATAN IPP L DRMEVI +PGY+ EEK+ IA RHLIP+ L Q
Sbjct: 433 HYLNVAFDLSQVLFIATANTTATIPPALFDRMEVIPVPGYSQEEKIEIAHRHLIPKQLQQ 492
Query: 506 HGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKD 565
HGL + +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE + + D
Sbjct: 493 HGLTPQQIQIPQDTTLTIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKDTKLDRSD 552
Query: 566 VHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGP 621
V A+G E E I + +S+T + P+++D L+ +LGP
Sbjct: 553 V------------AEG-EGCREHILEDDKPESISDTTDLALPPEMPILIDFHALKDILGP 599
Query: 622 PRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
P + + E +ER++ PG+++GL WT GG++ FVEA+ M G G+L LTGQLGDV+KESA +
Sbjct: 600 PIY-EMEVSERLSQPGVAIGLAWTPLGGKIMFVEASRMDGDGQLTLTGQLGDVMKESAHL 658
Query: 682 ALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRK 740
A++W+R+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS +
Sbjct: 659 AISWLRSNAKRFHLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGR 718
Query: 741 RVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASL 800
VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K++I+P+RN K+L E+P+ V L
Sbjct: 719 LVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQIIIPQRNEKNLEEIPSNVRQDL 778
Query: 801 EIILAKRMEDVLEQAFEGG 819
+ A +++VL AF+GG
Sbjct: 779 NFVTASCLDEVLNAAFDGG 797
>gi|426382123|ref|XP_004057670.1| PREDICTED: lon protease homolog 2, peroxisomal isoform 2 [Gorilla
gorilla gorilla]
Length = 808
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/793 (44%), Positives = 497/793 (62%), Gaps = 71/793 (8%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++++ + +++
Sbjct: 121 IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQILDAVSLEER-------------- 166
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
F+++ + ++ + L + K + D+ + +IR +IT + G L
Sbjct: 167 ----------FKMTIPLLVRQIEGLKLLQKTRKPKQDDDKRVIAIRPVRRITH-ISGTLE 215
Query: 213 KSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQ 272
++ +V LE+K++++ MP K KE++RLKKM
Sbjct: 216 DEDEDEDNDD------------------IVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMP 257
Query: 273 PQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVR 332
P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLAVR
Sbjct: 258 QSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLEYLAVR 316
Query: 333 KLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGS 392
+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GS
Sbjct: 317 QLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGS 376
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
MPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV F
Sbjct: 377 MPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAF 436
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLS+V+F+ATAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL +
Sbjct: 437 DLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQ 496
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDVHRLGS 571
+QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE Q +E L S R G
Sbjct: 497 IQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVTEREGC 556
Query: 572 PLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDR 627
E I E +S+T + P+++D L+ +LGPP + +
Sbjct: 557 --------------REHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPPMY-EM 601
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R
Sbjct: 602 EVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLR 661
Query: 688 ARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADT 746
+ A QL G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D
Sbjct: 662 SNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDV 721
Query: 747 AMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAK 806
AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L + A
Sbjct: 722 AMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTAS 781
Query: 807 RMEDVLEQAFEGG 819
+++VL AF+GG
Sbjct: 782 CLDEVLNAAFDGG 794
>gi|219519934|gb|AAI43247.1| LONP2 protein [Homo sapiens]
Length = 808
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/793 (44%), Positives = 497/793 (62%), Gaps = 71/793 (8%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++++ + +++
Sbjct: 121 IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQILDAVSLEER-------------- 166
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
F+++ + ++ + L + K + D+ + +IR +IT + G L
Sbjct: 167 ----------FKMTIPLLVRQIEGLKLLQKTRKPKQDDDKRVIAIRPIRRITH-ISGTLE 215
Query: 213 KSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQ 272
++ +V LE+K++++ MP K KE++RLKKM
Sbjct: 216 DEDEDEDNDD------------------IVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMP 257
Query: 273 PQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVR 332
P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLAVR
Sbjct: 258 QSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLEYLAVR 316
Query: 333 KLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGS 392
+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GS
Sbjct: 317 QLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGS 376
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
MPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV F
Sbjct: 377 MPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAF 436
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLS+V+F+ATAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL +
Sbjct: 437 DLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQ 496
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDVHRLGS 571
+QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE Q +E L S R G
Sbjct: 497 IQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVTEREGC 556
Query: 572 PLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDR 627
E I E +S+T + P+++D L+ +LGPP + +
Sbjct: 557 --------------REHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPPMY-EM 601
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R
Sbjct: 602 EVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLR 661
Query: 688 ARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADT 746
+ A QL G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D
Sbjct: 662 SNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDV 721
Query: 747 AMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAK 806
AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L + A
Sbjct: 722 AMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTAS 781
Query: 807 RMEDVLEQAFEGG 819
+++VL AF+GG
Sbjct: 782 CLDEVLNAAFDGG 794
>gi|332845862|ref|XP_003315137.1| PREDICTED: lon protease homolog 2, peroxisomal isoform 1 [Pan
troglodytes]
gi|397498141|ref|XP_003819850.1| PREDICTED: lon protease homolog 2, peroxisomal isoform 2 [Pan
paniscus]
Length = 808
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/793 (44%), Positives = 497/793 (62%), Gaps = 71/793 (8%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ GLCRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGLCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A++++ + +++
Sbjct: 121 IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQILDAVSLEER-------------- 166
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
F+++ + ++ + L + K + D+ + +IR +IT + G L
Sbjct: 167 ----------FKMTIPLLVRQIEGLKLLQKTRKPKQDDDKRVIAIRPIRRITH-ISGTLE 215
Query: 213 KSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQ 272
++ +V LE+K++++ MP K KE++RLKKM
Sbjct: 216 DEDEDEDNDD------------------IVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMP 257
Query: 273 PQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVR 332
P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLAVR
Sbjct: 258 QSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLEYLAVR 316
Query: 333 KLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGS 392
+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GS
Sbjct: 317 QLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGS 376
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
MPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV F
Sbjct: 377 MPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAF 436
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLS+V+F+ATAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL +
Sbjct: 437 DLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQ 496
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDVHRLGS 571
+QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE Q +E L S R G
Sbjct: 497 IQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVTEREGC 556
Query: 572 PLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDR 627
E I E +S+T + P+++D L+ +LGPP + +
Sbjct: 557 --------------REHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPPMY-EM 601
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R
Sbjct: 602 EVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLR 661
Query: 688 ARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADT 746
+ A QL G +LL D+H+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D
Sbjct: 662 SNAKKYQLTNAFGSFDLLDNTDVHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDV 721
Query: 747 AMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAK 806
AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L + A
Sbjct: 722 AMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTAS 781
Query: 807 RMEDVLEQAFEGG 819
+++VL AF+GG
Sbjct: 782 CLDEVLNAAFDGG 794
>gi|119603129|gb|EAW82723.1| peroxisomal LON protease like, isoform CRA_a [Homo sapiens]
Length = 670
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/664 (50%), Positives = 455/664 (68%), Gaps = 31/664 (4%)
Query: 167 FEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRA 226
++ + +LD+V L+ R L+ R ++ + K+ QK K + + +R
Sbjct: 13 YKYAVQILDAVSLEERFKMTIPLLVRQIEGL----KLLQKTRKPKQDDDKRVIAIRPIRR 68
Query: 227 IKEELGD-----NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS 281
I G D+D DD+V LE+K++++ MP K KE++RLKKM P Y +
Sbjct: 69 ITHISGTLEDEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALT 128
Query: 282 RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGP 341
R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLAVR+LK + +GP
Sbjct: 129 RNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGP 187
Query: 342 VLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 401
+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GL
Sbjct: 188 ILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGL 247
Query: 402 KRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVA 461
K VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV FDLS+V+F+A
Sbjct: 248 KTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIA 307
Query: 462 TANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVK 521
TAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL + +QIP+
Sbjct: 308 TANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTL 367
Query: 522 LVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I RYTREAGVR+L+R L A+ RA AVKVAE Q +E L S R G
Sbjct: 368 DIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVTEREGC--------- 418
Query: 581 GAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAAP 636
E I E +S+T + P+++D L+ +LGPP + + E ++R++ P
Sbjct: 419 -----REHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPPMY-EMEVSQRLSQP 472
Query: 637 GISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLV 696
G+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R+ A QL
Sbjct: 473 GVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLT 532
Query: 697 AEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLR
Sbjct: 533 NAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLR 592
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
GLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L + A +++VL A
Sbjct: 593 GLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAA 652
Query: 816 FEGG 819
F+GG
Sbjct: 653 FDGG 656
>gi|114205472|gb|AAI10435.1| LONP2 protein [Homo sapiens]
Length = 598
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 320/585 (54%), Positives = 422/585 (72%), Gaps = 22/585 (3%)
Query: 241 LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI 300
+V LE+K++++ MP K KE++RLKKM P Y +R YLEL+ +LPW K++ +
Sbjct: 16 IVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNKSTTD- 74
Query: 301 DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 360
LD++AA+ LD+DHY + ++K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS+ S+
Sbjct: 75 RLDIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSV 134
Query: 361 ASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTG 420
A LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G
Sbjct: 135 AKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLG 194
Query: 421 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVI 480
++GDPA+ALLEVLDPEQN F DHYLNV FDLS+V+F+ATAN IP LLDRME+I
Sbjct: 195 KSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPAALLDRMEII 254
Query: 481 ELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNL 540
++PGYT EEK+ IA RHLIP+ L+QHGL + +QIP+ +I RYTREAGVR+L+R L
Sbjct: 255 QVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKL 314
Query: 541 AALARAAAVKVAE-QEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVS 599
A+ RA AVKVAE Q +E L S R G E I E +S
Sbjct: 315 GAICRAVAVKVAEGQHKEAKLDRSDVTEREGC--------------REHILEDEKPESIS 360
Query: 600 NTFRIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
+T + P+++D L+ +LGPP + + E ++R++ PG+++GL WT GGE+ FVE
Sbjct: 361 DTTDLALPPEMPILIDFHALKDILGPPMY-EMEVSQRLSQPGVAIGLAWTPLGGEIMFVE 419
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFP 714
A+ M G+G+L LTGQLGDV+KESA +A++W+R+ A QL G +LL DIH+HFP
Sbjct: 420 ASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFP 479
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
AGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR
Sbjct: 480 AGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRA 539
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
G+K+VI+P RN KDL +P V L + A +++VL AF+GG
Sbjct: 540 GLKQVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGG 584
>gi|384487536|gb|EIE79716.1| ATP-dependent protease La [Rhizopus delemar RA 99-880]
Length = 803
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 365/784 (46%), Positives = 500/784 (63%), Gaps = 96/784 (12%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR-GTYYTARISSLEMTKIEME 107
G AAR L + R +G + + +EG+ RF +++ + T Y E+ I+ E
Sbjct: 83 GCAARILRIQR-----AGLGAFTMFVEGVSRFKIRDFQKKEDTLYA------EVNYIDYE 131
Query: 108 QVEQDPD----FIALSRQFKATAMELI---SVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
+V D F AL R+F EL ++++Q K LL++VP LAD+ V
Sbjct: 132 EVSDKDDDMIRFKALVREFLLKMKELRMPENLIQQLTK-------LLDSVPPPVLADLLV 184
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
E SF+E+L ML + D+ ++++E++ VE +LSK Q+EF L
Sbjct: 185 TVIETSFDEKLTMLATEDV-----------------LKISEQVHSSVENKLSKKQREFYL 227
Query: 221 RQQMRAIKEELGDND-----DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQ 275
RQQ+ AIK+ELG++D DED++ +L RK++ A +P Q+EL+RLKK+QP
Sbjct: 228 RQQLEAIKKELGESDGGNGGKDEDEIESLGRKLEEAELPEEAATVAQRELKRLKKLQPAS 287
Query: 276 PGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK 335
Y+ +R YLEL+ADLPW K +++ +D+K AKE+L+ DH+GL +VK+RIIEYL+V K+K
Sbjct: 288 SEYSVARNYLELLADLPWNKKTQDT-IDIKKAKEKLEQDHFGLDQVKKRIIEYLSVMKIK 346
Query: 336 PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPG 395
D + P++CFVGPPGVGKTSL SIAS+LGR+F R+SLGGV+DEAD+RGHRRTY+G+MPG
Sbjct: 347 GDLKAPIICFVGPPGVGKTSLGKSIASSLGREFHRVSLGGVRDEADMRGHRRTYVGAMPG 406
Query: 396 RLIDGLKRVGVCNPVMLLDEIDK-TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
+I GL++ V NP+ LLDEIDK S GDPA+ALLEVLDPEQN +F+DHYLNVPFDL
Sbjct: 407 LIIQGLRKCKVNNPLFLLDEIDKLVHSTHYGDPAAALLEVLDPEQNNSFSDHYLNVPFDL 466
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
S V+F+ATAN IP PLLDRME+I L GYT EEKL IA HL+P+ L HGL ++
Sbjct: 467 SNVLFIATANSLDTIPEPLLDRMEIITLNGYTFEEKLYIAKSHLLPKQLTVHGLQPGQVK 526
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLL 574
+ + + V + YTRE+GVR+LER +A++ RA V++A+
Sbjct: 527 MSDDVFLKVAENYTRESGVRSLERTIASIVRAKCVELAD--------------------- 565
Query: 575 DNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVA 634
+ ES E ++ A LE +LG F ++E AER A
Sbjct: 566 ----------------LRESNQESKYNPNVSM------ADLEAILGMA-FYEKEVAEREA 602
Query: 635 APGISVGLVWTNFG-GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
PG+ GL ++ G G + FVE+T M G+GEL LTG LGDVIKESA++ALTWV++ A L
Sbjct: 603 LPGVVTGLAYSGSGNGGILFVESTKMPGRGELQLTGSLGDVIKESAKLALTWVKSHAYAL 662
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
++V +L++ D+HIH P GAVPKDGPSAGVTLVT+LVSLFS V TAMTGE++
Sbjct: 663 KIVPTKDASLVEKYDVHIHVPGGAVPKDGPSAGVTLVTSLVSLFSGYHVPTTTAMTGEIS 722
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE-VPAAVLASLEIILAKRMEDVL 812
LRG VLPVGG+K+K+++AHR GI+++ILP RN KD+ + VP + +E I AK + DVL
Sbjct: 723 LRGQVLPVGGIKEKVVSAHRAGIRKIILPFRNRKDVQQDVPEKIKEDIEFIFAKNIWDVL 782
Query: 813 EQAF 816
E A
Sbjct: 783 EAAL 786
>gi|14042513|dbj|BAB55278.1| unnamed protein product [Homo sapiens]
Length = 581
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 319/582 (54%), Positives = 420/582 (72%), Gaps = 22/582 (3%)
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
LE+K++++ MP K KE++RLKKM P Y +R YLEL+ +LPW K++ + LD
Sbjct: 2 LEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLD 60
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
++AA+ LD+DHY + ++K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A
Sbjct: 61 IRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKT 120
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G +
Sbjct: 121 LGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSL 180
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
+GDPA+ALLEVLDPEQN F DHYLNV FDLS+V+F+ATAN IP LLDRME+I++P
Sbjct: 181 QGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVP 240
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EEK+ IA RHLIP+ L+QHGL + +QIP+ +I RYTREAGVR+L+R L A+
Sbjct: 241 GYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAI 300
Query: 544 ARAAAVKVAE-QEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
RA AVKVAE Q +E L S R G E I E +S+T
Sbjct: 301 CRAVAVKVAEGQHKEAKLDRSDVTEREGC--------------REHILEDEKPESISDTT 346
Query: 603 RIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
+ P+++D L+ +LGPP + + E ++R++ PG+++GL WT GGE+ FVEA+
Sbjct: 347 DLALPPEMPILIDFHALKDILGPPMY-EMEVSQRLSQPGVAIGLAWTPLGGEIMFVEASR 405
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGA 717
M G+G+L LTGQLGDV+KESA +A++W+R+ A QL G +LL DIH+HFPAGA
Sbjct: 406 MDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFPAGA 465
Query: 718 VPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIK 777
V KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K
Sbjct: 466 VTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLK 525
Query: 778 RVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
+VI+P RN KDL +P V L + A +++VL AF+GG
Sbjct: 526 QVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGG 567
>gi|85860155|ref|YP_462357.1| ATP-dependent protease La [Syntrophus aciditrophicus SB]
gi|123517201|sp|Q2LVS9.1|LON_SYNAS RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|85723246|gb|ABC78189.1| ATP-dependent protease La [Syntrophus aciditrophicus SB]
Length = 790
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 350/771 (45%), Positives = 479/771 (62%), Gaps = 67/771 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G L L+ K +G +VV +GL RF + E Y AR+ +E I
Sbjct: 84 HRVGTCVSILKLA----KQAGEKAQLVV-QGLARFRIVEFLEEEPYIQARVEKIE-ADIL 137
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
++ +E + LS F ++L L Q+ K + E LADI +
Sbjct: 138 IKDLEIEALMANLSTLFD-RVIKLSPFL--PQEFAAMAKSIQEP---GDLADIIASIVNA 191
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
S E++ +L+++D++ RL + T +V+ L+ + + KI +V+ + KSQ++F LRQQ++
Sbjct: 192 SVEDKQKILETLDIRQRLREITLIVNHQLEILELGSKIQSQVQEDIDKSQRDFYLRQQLK 251
Query: 226 AIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYL 285
AI+EELG++D++ ++ +K++ + K +EL R+ +M P Y+ + YL
Sbjct: 252 AIREELGESDENRVEVAEYRKKIEEKMLTEEARKEAFRELDRMSRMHPASAEYSVATTYL 311
Query: 286 ELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCF 345
+ I LPW + +++ + D++ A+ LD DHYGL + K+RIIEYLAVRKLKPD +GP+LCF
Sbjct: 312 DWITSLPWNERTQD-NQDIRQARRILDEDHYGLDKAKKRIIEYLAVRKLKPDTKGPILCF 370
Query: 346 VGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVG 405
VGPPG GKTSLA SIA ALGRKF RISLGGV DEA+IRGHRRTY+G++PGR+I G++R
Sbjct: 371 VGPPGTGKTSLAQSIARALGRKFYRISLGGVHDEAEIRGHRRTYVGALPGRIIQGIRRAE 430
Query: 406 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 465
NPV +LDEIDK GSD RGDP+SALLEVLDPEQN F DHYL V FDLS V F+ TAN
Sbjct: 431 SSNPVFVLDEIDKVGSDFRGDPSSALLEVLDPEQNFAFMDHYLGVAFDLSHVTFITTANI 490
Query: 466 AQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQ 525
IPP L DR+EVIELPGYT +EKLRIA R+LIPR + +GL E ++ +L+I
Sbjct: 491 LDTIPPALRDRLEVIELPGYTQDEKLRIAERYLIPRQREANGLTPEQIKFTRGAARLIIS 550
Query: 526 RYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVE 585
YTREAGVRNLER +AA+ R A ++AE E AL S++D+HR
Sbjct: 551 GYTREAGVRNLEREIAAVCRGVASQIAEGEISSALISARDIHRY---------------- 594
Query: 586 MEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWT 645
LGP R +A ER++ PGI++GL WT
Sbjct: 595 ---------------------------------LGPVRMIS-DARERISKPGIAMGLAWT 620
Query: 646 NFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQ 705
GG++ FVEATAM+G+ L LTGQLG+V+KESA AL+++R+ A + + ++ +
Sbjct: 621 PTGGDLLFVEATAMKGRKGLTLTGQLGEVMKESASAALSFIRSNAVKIGI----PVDFFE 676
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
DIHIH PAGA+PKDGPSAGVT++ AL SL + + V+ D AMTGE+TLRGLVLPVGG+K
Sbjct: 677 ETDIHIHVPAGAIPKDGPSAGVTMLAALASLLTNRTVKNDLAMTGEITLRGLVLPVGGIK 736
Query: 766 DKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+K+LAAHR GIK +ILP+ N KDL E+P+ V + + M +VL A
Sbjct: 737 EKVLAAHRAGIKTIILPKWNRKDLEEIPSKVRKEMNFVFVNDMREVLNIAL 787
>gi|332227799|ref|XP_003263076.1| PREDICTED: lon protease homolog 2, peroxisomal isoform 2 [Nomascus
leucogenys]
Length = 806
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 360/793 (45%), Positives = 496/793 (62%), Gaps = 73/793 (9%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
ASD Q++ H G AA A+ + G P + Y +++ G+CRF + ++ Y
Sbjct: 67 ASDA---QDLPPLHRIGTAALAVQVV-GSNWP--KPHYTLLITGVCRFQIVQVLKEKPYP 120
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
A + L+ + + + LS QF A+++
Sbjct: 121 IAEVEQLDRLEEFPNTCKMREELGELSEQFYKYAVQI----------------------- 157
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
LD+V L+ R L+ R ++ +++ +K T+K +
Sbjct: 158 ---------------------LDAVSLEERFKMTIPLLVRQIEGLKLLQK-TRKPKQDDD 195
Query: 213 KSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQ 272
K +++ I L D D+D DD+V LE+K++++ MP K KE++RLKKM
Sbjct: 196 KRVIAIRPIRRITHISGTLEDEDEDNDDIVMLEKKIRTSSMPEQAHKVCVKEIKRLKKMP 255
Query: 273 PQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVR 332
P Y +R LE + +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLAVR
Sbjct: 256 QSMPEYALTRNDLEPMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKKRVLEYLAVR 314
Query: 333 KLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGS 392
+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GS
Sbjct: 315 QLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGS 374
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
MPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV F
Sbjct: 375 MPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAF 434
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLS+V+F+ATAN IP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL +
Sbjct: 435 DLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQ 494
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDVHRLGS 571
+QIP+ +I RYTREAGVR+L+R L A+ RA AVKVAE Q +E L S R G
Sbjct: 495 IQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVTEREGC 554
Query: 572 PLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDR 627
E I E +S T + P+++D L+ +LGPP + +
Sbjct: 555 --------------REHILEDEKPESISETTDLALPPEMPILIDFHALKDILGPPMY-EM 599
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R
Sbjct: 600 EVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLR 659
Query: 688 ARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADT 746
+ A QL G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D
Sbjct: 660 SNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDV 719
Query: 747 AMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAK 806
AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN KDL +P V L + A
Sbjct: 720 AMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNEKDLEGIPGNVRQDLSFVTAS 779
Query: 807 RMEDVLEQAFEGG 819
+++VL AF+GG
Sbjct: 780 CLDEVLNAAFDGG 792
>gi|193785286|dbj|BAG54439.1| unnamed protein product [Homo sapiens]
Length = 581
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 318/582 (54%), Positives = 419/582 (71%), Gaps = 22/582 (3%)
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
LE+K++++ MP K KE++RLKKM P Y +R YLEL+ +LPW K++ + LD
Sbjct: 2 LEKKIRTSSMPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLD 60
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
++AA+ LD+DHY + ++K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A
Sbjct: 61 IRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKT 120
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G +
Sbjct: 121 LGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSL 180
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
+GDPA+ALLEVLDPEQN F D YLNV FDLS+V+F+ATAN IP LLDRME+I++P
Sbjct: 181 QGDPAAALLEVLDPEQNHNFTDLYLNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVP 240
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EEK+ IA RHLIP+ L+QHGL + +QIP+ +I RYTREAGVR+L+R L A+
Sbjct: 241 GYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAI 300
Query: 544 ARAAAVKVAE-QEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
RA AVKVAE Q +E L S R G E I E +S+T
Sbjct: 301 CRAVAVKVAEGQHKEAKLDRSDVTEREGC--------------REHILEDEKPESISDTT 346
Query: 603 RIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
+ P+++D L+ +LGPP + + E ++R++ PG+++GL WT GGE+ FVEA+
Sbjct: 347 DLALPPEMPILIDFHALKDILGPPMY-EMEVSQRLSQPGVAIGLAWTPLGGEIMFVEASR 405
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGA 717
M G+G+L LTGQLGDV+KESA +A++W+R+ A QL G +LL DIH+HFPAGA
Sbjct: 406 MDGEGQLTLTGQLGDVVKESAHLAISWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFPAGA 465
Query: 718 VPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIK 777
V KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K
Sbjct: 466 VTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLK 525
Query: 778 RVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
+VI+P RN KDL +P V L + A +++VL AF+GG
Sbjct: 526 QVIIPRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGG 567
>gi|336324126|ref|YP_004604093.1| anti-sigma H sporulation factor LonB [Flexistipes sinusarabici DSM
4947]
gi|336107707|gb|AEI15525.1| anti-sigma H sporulation factor, LonB [Flexistipes sinusarabici DSM
4947]
Length = 776
Score = 633 bits (1632), Expect = e-178, Method: Compositional matrix adjust.
Identities = 343/778 (44%), Positives = 485/778 (62%), Gaps = 80/778 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A L R ++ P GRV ++++GL R + + +Y +++ +E ++ E
Sbjct: 72 YNIGTVALIL---RMLKLPDGRVK--ILVQGLKRAEIDKYEQEDPFYKVKLNLIEESEPE 126
Query: 106 MEQVEQDPDFIALSRQF-KATAM------ELISVLEQKQKTGGRTKVLLETVPIHKLADI 158
E ++ + + Q KA + +L++V+E + G KLADI
Sbjct: 127 -EGLKSEALVRHVKEQLSKAVNLGKPLLPDLLAVIETINEPG-------------KLADI 172
Query: 159 FVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEF 218
A+ + EE V+L+ ++ + RL K E ++R + + V ++I +G++ KSQ+E+
Sbjct: 173 IAANLGLKAEESQVILEEIEAEKRLEKVNEFLNREISILEVQQQIMNDAKGEIDKSQREY 232
Query: 219 LLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGY 278
L++QMRAIK+ELG+ DD ++ L+ K++ A MP + + +K+L RL +M P
Sbjct: 233 FLKEQMRAIKKELGEEDDISKEVEELQEKIRKARMPKKVREEAEKQLGRLSRMHPDSAEA 292
Query: 279 TSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDA 338
T R YLE + +LPW K+S++ +L++K AK+ LD DHYGL VK RI+++LAVRKL
Sbjct: 293 TVVRSYLEWLVELPWSKSSKD-NLNIKHAKKILDEDHYGLDEVKDRILDFLAVRKLNKKM 351
Query: 339 RGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLI 398
+ P+LCFVGPPGVGKTSL SIA A+ R+F R+SLGG +DEA+IRGHRRTYIG+MPG++I
Sbjct: 352 KSPILCFVGPPGVGKTSLGKSIARAMNREFFRMSLGGTRDEAEIRGHRRTYIGAMPGKII 411
Query: 399 DGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVI 458
G+K G+ NPV +LDEIDK G D RGDP+SALLEVLDPEQN +F DHYL VPFDLS+V
Sbjct: 412 QGIKNTGMNNPVFMLDEIDKLGMDFRGDPSSALLEVLDPEQNSSFVDHYLGVPFDLSRVF 471
Query: 459 FVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEA 518
F+ TAN PIPP L DRMEVI +PGYT +EK++IA +LIPR + ++GLG + +Q
Sbjct: 472 FITTANYLDPIPPALKDRMEVIRIPGYTEDEKIKIAENYLIPRQIKENGLGEKKVQFSRK 531
Query: 519 MVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRL 578
+ +I YTRE+G+RNLER + + R A KVAE
Sbjct: 532 AIFEIIDGYTRESGLRNLERTIGKICRKIARKVAE------------------------- 566
Query: 579 ADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGI 638
GA E TFRIT V EK LGP +F+D E + GI
Sbjct: 567 --GAGKE---------------TFRITPKTV------EKFLGPRKFEDEEEL-KTNEVGI 602
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
GL WT +GGEV FVE +GKG + +TGQLGD++KESA+ A T V++ A ++
Sbjct: 603 VTGLAWTPYGGEVLFVECNKYKGKGNMVVTGQLGDIMKESAKAAFTAVKSLAEKYEI--- 659
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ DIHIH PAGA+PKDGPSAG+T+ TA+ S+F+ K+VR D AMTGE+T+ G V
Sbjct: 660 -DEKMFSDYDIHIHVPAGAIPKDGPSAGITMATAIFSIFTGKKVRKDVAMTGEITISGKV 718
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K+LAA R G+ +VI+P++N KDLV VPA V SLEI+ ++ ++VL+ F
Sbjct: 719 LPIGGLKEKLLAAKRIGVAKVIIPKKNKKDLVNVPANVKNSLEIVAVEKFDEVLQHTF 776
>gi|206889737|ref|YP_002248698.1| ATP-dependent protease La [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741675|gb|ACI20732.1| ATP-dependent protease La [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 804
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 337/772 (43%), Positives = 491/772 (63%), Gaps = 68/772 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G + + R P GR+ ++++GL + E S +Y A+I +E +++
Sbjct: 85 YNIGTVCMIMRMLR---LPDGRLK--ILVQGLSKAKALEFSQFEGFYLAKIEKIEDIQLK 139
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETV-PIHKLADIFVASFE 164
+E + AL R K + IS+ + V++E + +LAD+ ++
Sbjct: 140 EFTLEHE----ALVRTVKEQLEKAISL---GKNIPPDAMVIIENIDEPGRLADLIASNLG 192
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+ E +L+ D RL+K E+++R +Q + + +KI ++ ++ K+Q+E+ LR+Q+
Sbjct: 193 LKSSEAQQILEITDPFERLNKIREILNREIQLLTIQQKIKKEARDEIDKTQREYFLREQL 252
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+AI++ELGD D+ +++ +K++ A MP + + +K+L+RL++M P+ R Y
Sbjct: 253 KAIQKELGDIDEKAEEINEFRKKIEEAKMPQKVKEEAEKQLKRLERMHPEAAESAVVRTY 312
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
LE + +LPW +++E+ LD+KAAKE LD DHY L +VK+RI+EYL+VRKLK +GP+LC
Sbjct: 313 LEWLTELPWSRSTED-RLDIKAAKEVLDKDHYDLEKVKERILEYLSVRKLKEKMKGPILC 371
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
F+GPPGVGKTSL SIA ALGR+F+RISLGGV+DEA+IRGHRRTY+G++PGR+I G+++
Sbjct: 372 FIGPPGVGKTSLGRSIAKALGREFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGIRQA 431
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G NPV +LDEIDK G D RGDP+SALLEVLDPEQN +F DHYL VPFDLS V+FV T N
Sbjct: 432 GTNNPVFMLDEIDKLGMDFRGDPSSALLEVLDPEQNNSFVDHYLAVPFDLSNVMFVCTGN 491
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
A IP L DRME+I L GYT EEKL+IA ++LIP+ L++HGL ++I + +K +I
Sbjct: 492 IADTIPSALRDRMEIIYLSGYTEEEKLQIAKKYLIPKQLEEHGLNYSIMKISDKAIKYII 551
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEV 584
YTREAGVRNLER +A L R A + E ++++
Sbjct: 552 THYTREAGVRNLEREIANLCRKVAKFITEGKKKK-------------------------- 585
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
F IT V K +G P++ E ++ G++ GL W
Sbjct: 586 -----------------FYITPQKV------SKFIGAPKYLPEEELKKEEV-GVATGLAW 621
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GG+V +VEAT M+GKG L LTGQLG+V+KESAQ AL++V+++A +L++ L
Sbjct: 622 TEAGGDVIYVEATIMKGKGNLILTGQLGEVMKESAQAALSYVKSKAKELKI----DEKLF 677
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
D+HIH PAGA+PKDGPSAG+T+ +A+ S+F+ K +R D AMTGE+TLRG VLP+GG+
Sbjct: 678 STMDLHIHVPAGAIPKDGPSAGITMASAIASVFTGKPLRKDVAMTGEITLRGRVLPIGGL 737
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K+K+LAA R GIK VI+P+RN KDL E+P V ++ ILA+ M+ VL+ F
Sbjct: 738 KEKVLAAKRMGIKTVIIPKRNKKDLEELPKYVKEGMKFILAESMDQVLKHIF 789
>gi|222054005|ref|YP_002536367.1| ATP-dependent protease La [Geobacter daltonii FRC-32]
gi|221563294|gb|ACM19266.1| ATP-dependent protease La [Geobacter daltonii FRC-32]
Length = 817
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 339/783 (43%), Positives = 487/783 (62%), Gaps = 84/783 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI----------SS 98
GV A+ + R ++ P GRV +V +GL + + E + +Y+ RI ++
Sbjct: 75 GVGTVAM-IMRMLKLPDGRVKILV--QGLTKGRITEYMEQKPFYSVRIERIVEPLLPENT 131
Query: 99 LEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADI 158
LE EQ ++L K + E++ ++E Q+ G LAD+
Sbjct: 132 LETEAFMRTVKEQLAKIVSLG---KVVSPEVMVIVENMQEAGS-------------LADL 175
Query: 159 FVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEF 218
++ + EE +L+ +D RL + + +++ + + + +I + ++ KSQ+E+
Sbjct: 176 IASNIGLKVEEAQGLLEIIDPIERLKRVNDFLNKEFELLSMQARIQSAAKEEMGKSQREY 235
Query: 219 LLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGY 278
LR+Q+RAI++ELG+ D +++ L + + +A MP NI K K+L RL++M P
Sbjct: 236 YLREQLRAIQQELGETDARSEEIAELRKAIANARMPQNIEKEALKQLGRLEQMHPDAAES 295
Query: 279 TSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDA 338
R +L+ + +LPW K++++ L++K AKE LD DHY L ++K+RI+E+LAVRKLK
Sbjct: 296 GMLRTFLDWMVELPWSKSTKD-SLEIKKAKEILDEDHYFLEKIKERILEFLAVRKLKKKM 354
Query: 339 RGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLI 398
+GP+LCFVGPPGVGKTSL SIA A+GRKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I
Sbjct: 355 KGPILCFVGPPGVGKTSLGKSIARAMGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRII 414
Query: 399 DGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVI 458
GLK+ G NPV +LDE+DK G+D RGDP+SALLEVLDPEQN +F+DHY+N+PF+LS V+
Sbjct: 415 QGLKQAGSNNPVFMLDELDKLGADFRGDPSSALLEVLDPEQNHSFSDHYINLPFNLSDVM 474
Query: 459 FVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEA 518
F+ATAN+ IP PL DRMEVI L GYT EEKL+IA R+L+PR ++G+ + + +
Sbjct: 475 FIATANQMDTIPGPLRDRMEVISLSGYTEEEKLQIAKRYLVPRQTKENGITEKIITFSDE 534
Query: 519 MVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRL 578
+K +I +YTREAG+RNLER + ++ R A +VAE E+ Q
Sbjct: 535 ALKTIISKYTREAGLRNLEREIGSVCRKVARRVAEGEKRQ-------------------- 574
Query: 579 ADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGI 638
++ A + K LGPPRF RE + G+
Sbjct: 575 -----------------------------FPINAATVTKYLGPPRF-IREEEMKQNEIGV 604
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
GL WT GGEV F+EAT M+GKG L LTGQLGDV+KES AL+++R RA +L L +
Sbjct: 605 VTGLAWTPVGGEVLFIEATIMKGKGGLSLTGQLGDVMKESVHAALSYIRTRAVELHLTED 664
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
N+ DIH+H PAGA+PKDGPSAGVT+ TALVS ++ V+ D AMTGE+TLRG V
Sbjct: 665 FYSNM----DIHVHVPAGAIPKDGPSAGVTMATALVSALTKTPVKKDVAMTGEITLRGKV 720
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
LP+GG+K+KILAA R GI +I+PE+N KD+ +VP +L ++I+ A ++DVL+ A E
Sbjct: 721 LPIGGLKEKILAAIRLGIVTIIIPEQNRKDIEDVPRHILKKVKIVYASTIDDVLKVALEK 780
Query: 819 GCP 821
P
Sbjct: 781 YPP 783
>gi|404498063|ref|YP_006722169.1| ATP-dependent Lon protease (La) [Geobacter metallireducens GS-15]
gi|418066007|ref|ZP_12703375.1| ATP-dependent protease La [Geobacter metallireducens RCH3]
gi|123570864|sp|Q39QP7.1|LON_GEOMG RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|78195660|gb|ABB33427.1| ATP-dependent Lon protease (La) [Geobacter metallireducens GS-15]
gi|373561240|gb|EHP87479.1| ATP-dependent protease La [Geobacter metallireducens RCH3]
Length = 823
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 346/772 (44%), Positives = 485/772 (62%), Gaps = 77/772 (9%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFI 116
+ R ++ P GRV V+++GL + + E YT RI + + E +E +
Sbjct: 88 IMRMLKLPDGRVK--VLVQGLAKGLITEFVESKPAYTVRIERIVEPSVPEESLETEALMR 145
Query: 117 ALSRQF-------KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEE 169
A+ Q KA + E++ ++E Q+ G LAD+ ++ + ++
Sbjct: 146 AVKEQLTQIVSLGKAVSPEVLVIVENMQEPGS-------------LADLIASNIGLKVDD 192
Query: 170 QLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKE 229
+L+ +D RL K E +++ + + + KI + ++ KSQ+E+ LR+Q+RAI++
Sbjct: 193 AQALLEIIDPVQRLQKVNEHLNKEHELLDMQVKIQSAAKEEMGKSQREYFLREQLRAIQQ 252
Query: 230 ELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIA 289
ELG+ D ++L L + ++ A MP + K K+L RL++M P R +L+ +
Sbjct: 253 ELGETDPRSEELNELRKAIEQAKMPPVVEKEAFKQLGRLEQMHPDAAEAGMLRTFLDWMV 312
Query: 290 DLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPP 349
+LPW KA++++ LD+K A++ LD DH+ L ++K+RI+E+LAVRKL+ +GP+LCFVGPP
Sbjct: 313 ELPWGKATKDV-LDIKRARQILDEDHFYLEKIKERILEFLAVRKLRKKMKGPILCFVGPP 371
Query: 350 GVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNP 409
GVGKTSL SIA A+GRKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I GLK+ G NP
Sbjct: 372 GVGKTSLGKSIARAMGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGLKQAGSNNP 431
Query: 410 VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPI 469
V +LDE+DK G+D RGDP+SALLEVLDPEQN F+DHY+N+PF+LS V+F+ATAN+ +
Sbjct: 432 VFMLDELDKLGADFRGDPSSALLEVLDPEQNHMFSDHYINLPFNLSNVMFIATANQIDTV 491
Query: 470 PPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTR 529
P PL DRMEVI+L GYT EEKL IA R+LIPR + ++G+ + + I + V+ +I +YTR
Sbjct: 492 PGPLRDRMEVIQLSGYTEEEKLEIAKRYLIPRQMKENGISEKEIVISDEAVRTIIAKYTR 551
Query: 530 EAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVI 589
EAG+RNLER + ++ R A KVAE DG
Sbjct: 552 EAGLRNLEREIGSVCRKVARKVAE-------------------------GDG-------- 578
Query: 590 PMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGG 649
FRIT A + K LGP RF RE GI GL WT GG
Sbjct: 579 ----------RRFRITP------ATVAKYLGPARF-IREGEMEKNEVGIVTGLAWTPVGG 621
Query: 650 EVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDI 709
EV FVEAT M+GKG L LTG LGDV+KES Q AL+++R++A + L AED L G DI
Sbjct: 622 EVLFVEATIMKGKGGLTLTGHLGDVMKESVQAALSYIRSKAKEFHL-AED---FLSGYDI 677
Query: 710 HIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKIL 769
H+H PAGA+PKDGPSAGVT+ TALVS +R VR D AMTGE+TLRG VLP+GG+K+K+L
Sbjct: 678 HVHVPAGAIPKDGPSAGVTMATALVSALTRVPVRKDVAMTGEITLRGKVLPIGGLKEKML 737
Query: 770 AAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
AA R GIK +++PE+N KDL E+P +L + ++ AK ++DVL A E P
Sbjct: 738 AAIRAGIKTIVIPEQNEKDLEEIPKHILKKVTVVSAKVIDDVLAVALETFPP 789
>gi|302038345|ref|YP_003798667.1| ATP-dependent protease La [Candidatus Nitrospira defluvii]
gi|300606409|emb|CBK42742.1| ATP-dependent protease La [Candidatus Nitrospira defluvii]
Length = 831
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 341/776 (43%), Positives = 482/776 (62%), Gaps = 85/776 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G+ R L L P R+ +V +GL + ++E YY+ RI L TK
Sbjct: 85 GIIMRMLKL------PDERIKILV--QGLAKGRIEEYIQNDPYYSVRIEKLVETKQSGST 136
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI--------HKLADIFV 160
+E + A+ R K EQ +K KVL+ V + +LAD+
Sbjct: 137 LETE----AVMRTVK----------EQIEKIVSLGKVLIPDVMVVIENLEDPGRLADMVA 182
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
++ + + +L+ VD RL + +E++ + + + + +KI + +G++ K+Q+E+ L
Sbjct: 183 SNLGLKVDITQAVLEIVDPIQRLRQISEILSKEIDVLSMQQKIQAQAKGEMDKTQREYFL 242
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
R+Q++AI++ELG+ D+ +++ ++++ A MP + K +K+L+RL+KM P +
Sbjct: 243 REQLKAIQKELGELDERAEEVAEFRKRIKDAKMPEKVLKETEKQLKRLEKMHPDTAESAT 302
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YLE + +LPW K S++ +LDLKAA + L+ DHY L +VK+RI+EYLAVRKLK +G
Sbjct: 303 VRTYLEWMVELPWNKKSKD-NLDLKAAMKVLNEDHYDLEKVKERIVEYLAVRKLKEKMKG 361
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LCFVGPPGVGKTSL SIA ALGR+F+RISLGGV+DEA+IRGHRRTY+G++PGR+I G
Sbjct: 362 PILCFVGPPGVGKTSLGKSIARALGREFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQG 421
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+K+ G NPV +LDE+DK G D RGDP++ALLEVLDPEQN TF DHYL VPFDL++V+FV
Sbjct: 422 MKQAGTNNPVFMLDEVDKVGMDFRGDPSAALLEVLDPEQNSTFTDHYLGVPFDLTEVMFV 481
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
TAN PI P L DRMEVI++PGYT EEKL IA ++LIPR +++HG+ + +++ E +
Sbjct: 482 TTANLMDPILPALRDRMEVIDIPGYTEEEKLGIAQKYLIPRQMNEHGITEKHIRVNEPAI 541
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ VI YTREAGVRNLER +A L R A KVAE + E H
Sbjct: 542 RHVISHYTREAGVRNLEREIANLMRKVAKKVAEGKSE--------CH------------- 580
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+D+ L K LG +F E+ G++
Sbjct: 581 ----------------------------AIDQTNLNKFLGVAKFVPEAELEKDEI-GVAT 611
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG+V ++EAT M+GKG+L LTG LGDV+KESAQ AL++VR+R L +
Sbjct: 612 GLAWTESGGDVLYIEATVMKGKGQLTLTGHLGDVMKESAQAALSYVRSREKTLGISP--- 668
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ DIHIH PAGA PKDGPSAG+T+ TA+ S ++ VR D AMTGE+TLRG VLP
Sbjct: 669 -DIFAKNDIHIHVPAGATPKDGPSAGITMATAIASALAQIPVRRDLAMTGEITLRGRVLP 727
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+GG+K+KILAA R + V+LP+RN KDL E+P +L +E+I ++DV++ A
Sbjct: 728 IGGLKEKILAAKRAKLATVVLPKRNKKDLEEIPKHILKGIELIFVDTVDDVIKAAL 783
>gi|262199085|ref|YP_003270294.1| ATP-dependent protease La [Haliangium ochraceum DSM 14365]
gi|262082432|gb|ACY18401.1| ATP-dependent protease La [Haliangium ochraceum DSM 14365]
Length = 803
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 338/694 (48%), Positives = 456/694 (65%), Gaps = 60/694 (8%)
Query: 129 LISVLEQKQKTGGRTKV-LLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKAT 187
L +V + RT+V +L + +L + E+ E++L +L + + RL +
Sbjct: 138 LANVATSSPEASERTRVKILSLGDVDELVGVAADYVELEREDRLALLLAANPTDRLRRLL 197
Query: 188 ELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERK 247
+V R Q + + I ++EG +S+S +E +LR++MRAI+EELG+ D D D L +
Sbjct: 198 PIVARLNQVLTIKAGIDAELEGDISRSAREKVLRERMRAIREELGEADSDAD-LDEYRER 256
Query: 248 MQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAA 307
++++ MP+ + +++L R+ M P Y +R YLE + DLPW +E+ LD+ AA
Sbjct: 257 IEASKMPTEVRSAARRQLGRMNHMSSSSPEYNVTRTYLETLLDLPWGIQTEDT-LDVAAA 315
Query: 308 KERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRK 367
+ LD+DH GL +VK+RI+E++AVRKL PD +GP+LC VGPPGVGKTSL S+A+ALGRK
Sbjct: 316 RAILDADHAGLEKVKKRILEFVAVRKLAPDKQGPILCLVGPPGVGKTSLGRSVATALGRK 375
Query: 368 FIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDP 427
++R +LGGV+DEA+IRGHRRTYIG++PGR+ LK+ G NPVM+LDE+DK GSD RGDP
Sbjct: 376 YVRTALGGVRDEAEIRGHRRTYIGALPGRIAGALKKAGAMNPVMVLDELDKLGSDHRGDP 435
Query: 428 ASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTP 487
+SALLEVLDPEQN TF+DHYL + DLS+V+F+ATAN+ + IP PLLDR+E+I +PGYT
Sbjct: 436 SSALLEVLDPEQNSTFSDHYLEIDLDLSRVMFIATANQTETIPAPLLDRLEIIRIPGYTL 495
Query: 488 EEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAA 547
EEK IA +HL+P+ + +HGLG + L++ + + +I YTREAGVRNLER +AA+ R A
Sbjct: 496 EEKRVIARKHLLPKQIAEHGLGRDQLRVDDEALDELIGSYTREAGVRNLEREIAAVCRHA 555
Query: 548 AVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSP 607
AV+VA S
Sbjct: 556 AVEVASAS-------------------------------------------------VSE 566
Query: 608 LVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHL 667
L VD++MLE VLGPP F E A R A G+ GL WT GG++QFVEA AM G+G L L
Sbjct: 567 LSVDKSMLEDVLGPPNF-FAEMANRKAEVGVCAGLAWTPTGGQIQFVEARAMPGRGGLKL 625
Query: 668 TGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGV 727
TGQ+GDV+ ESA AL+WVRA A L + A+ LLQ DIH+H P+GAV KDGPSAGV
Sbjct: 626 TGQVGDVMTESASTALSWVRANAGTLGIDAK----LLQNADIHLHLPSGAVRKDGPSAGV 681
Query: 728 TLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLK 787
+VTAL+SLF+ K VR+D A+TGE+TLRGLVLPVGG+K+K+LAAHR GI V LPERN K
Sbjct: 682 AIVTALMSLFTHKPVRSDLAITGEVTLRGLVLPVGGIKEKVLAAHRGGIHTVFLPERNRK 741
Query: 788 DLVEVPAAVLASLEIILAKRMEDVLEQA---FEG 818
DL ++P V +L+I KR ++VL A FEG
Sbjct: 742 DLEDIPEEVRDALDIRFVKRADEVLALALADFEG 775
>gi|148262770|ref|YP_001229476.1| ATP-dependent protease La [Geobacter uraniireducens Rf4]
gi|146396270|gb|ABQ24903.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Geobacter uraniireducens Rf4]
Length = 817
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 341/780 (43%), Positives = 485/780 (62%), Gaps = 78/780 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
GV A+ + R ++ P GRV +V +GL + + +Y+ RI L +
Sbjct: 75 GVGTVAM-IMRMLKLPDGRVKILV--QGLTKGRITGYEAEKPFYSVRIERLVEPMVPENS 131
Query: 109 VEQDPDFIALSRQF-------KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVA 161
+E + + Q K + E++ ++E Q+ G LAD+ +
Sbjct: 132 LETEAFIRTVKEQLAKIVSLGKVVSPEVMVIVENMQEPGS-------------LADLIAS 178
Query: 162 SFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLR 221
+ + EE +L+ +D RL + E +++ + + + +I + ++ KSQ+E+ LR
Sbjct: 179 NIGLKVEEAQGLLEIIDPIERLKRVNEFLNKEFELLSMQARIQSAAKEEMGKSQREYYLR 238
Query: 222 QQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS 281
+Q+RAI++ELG+ D +++ L + +++ MP N+ K K+L RL++M P
Sbjct: 239 EQLRAIQQELGETDARSEEIAELRKAIENVKMPPNVEKEALKQLGRLEQMHPDAAESGML 298
Query: 282 RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGP 341
R +L+ + +LPW K++++ L++K AKE LD DHY L ++K RI+E+LAVRKLK +GP
Sbjct: 299 RTFLDWMVELPWSKSTKD-SLEIKKAKEILDEDHYYLEKIKDRILEFLAVRKLKKKMKGP 357
Query: 342 VLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 401
+LCFVGPPGVGKTSL SIA A+GRKF+RISLGGV+DEA+IRGHRRTY+G+MPGR+I GL
Sbjct: 358 ILCFVGPPGVGKTSLGKSIARAMGRKFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGL 417
Query: 402 KRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVA 461
K+ G NPV +LDE+DK G+D RGDP+SALLEVLDPEQN +F+DHY+N+PF LS V+F+A
Sbjct: 418 KQAGSNNPVFMLDELDKLGADFRGDPSSALLEVLDPEQNHSFSDHYINLPFSLSDVMFIA 477
Query: 462 TANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVK 521
TAN+ +P PL DRMEVI L GYT EEKL+IA R+L+PR + ++G+ + + + +K
Sbjct: 478 TANQIDTVPGPLRDRMEVISLSGYTEEEKLQIAKRYLVPRQIKENGITEKVITFSDEAIK 537
Query: 522 LVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADG 581
VI +YTREAG+RNLER + ++ R A KVAE E++Q + ++ V + P
Sbjct: 538 GVISKYTREAGLRNLEREIGSVCRKVARKVAEGEKKQFVINAATVAKYLGP--------- 588
Query: 582 AEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVG 641
PRF E E G+ G
Sbjct: 589 ----------------------------------------PRFLREEEMEYNEI-GVVTG 607
Query: 642 LVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGM 701
L WT GGEV FVEAT M+GKG L LTGQLGDV+KES Q AL+++RARA +LQL ED
Sbjct: 608 LAWTPVGGEVLFVEATIMKGKGGLTLTGQLGDVMKESVQAALSYIRARAAELQL-PEDFY 666
Query: 702 NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPV 761
+ + DIH+H PAGA+PKDGPSAGVT+ TALVS ++ V+ D AMTGE+TLRG VLP+
Sbjct: 667 STM---DIHVHVPAGAIPKDGPSAGVTMATALVSALAKIPVKKDVAMTGEITLRGKVLPI 723
Query: 762 GGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
GG+K+KILAA R GI +I+PE+N KDL +VP +L ++I+ AK ++DVL+ A E P
Sbjct: 724 GGLKEKILAAIRLGITTIIIPEQNRKDLEDVPRHILKKVKIVFAKTIDDVLKVALEKYPP 783
>gi|218888168|ref|YP_002437489.1| ATP-dependent protease La [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218759122|gb|ACL10021.1| ATP-dependent protease La [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 898
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 343/761 (45%), Positives = 479/761 (62%), Gaps = 63/761 (8%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P R+ V+++G+ R V+ Y TAR+ +L ++ VEQ+ A+
Sbjct: 200 RMLKMPDNRLK--VLVQGISRARVESFGAGEGYLTARVETLPEPELGPPTVEQE----AM 253
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
R + + +++S+ + T VL +LAD+ A+ + + +L+ D
Sbjct: 254 MRAAREQSEKILSL--RGIATSDIMAVLNSVDDPGRLADLIAANLRMKVSDAQAILECTD 311
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
RL E + + ++ + KI + K+QK++ LR+QM+AI+ ELG++ +++
Sbjct: 312 PDARLRLVNEQLVKEVEVASMQAKIQSMAREGMDKAQKDYFLREQMKAIRRELGESGNED 371
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
++L L R ++ +G+P + K K+LRRL M P T R YLE +A+LPW K S
Sbjct: 372 EELEDLTRSLERSGLPREVRKEADKQLRRLASMHPDSSEATVVRTYLEWLAELPWAKLSR 431
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD+ AK LD DH GL +VK RI+EYL+VRKL P ++GP+LCF GPPGVGKTSL
Sbjct: 432 D-RLDINKAKVILDEDHLGLAKVKDRILEYLSVRKLNPKSKGPILCFAGPPGVGKTSLGR 490
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A+GRKF RISLGG++DEA+IRGHRRTYIG+MPGR++ LK++G NPV++LDEIDK
Sbjct: 491 SIARAMGRKFQRISLGGMRDEAEIRGHRRTYIGAMPGRIVQSLKQLGTRNPVLMLDEIDK 550
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD RGDP+SALLEVLDPEQN +F+DHYLNVPFDLSKV+F+ TAN+ IPPPL DRME
Sbjct: 551 IGSDFRGDPSSALLEVLDPEQNFSFSDHYLNVPFDLSKVMFICTANQLDTIPPPLRDRME 610
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI +PGYT +EKL IA R+L+PR ++GL + +P+A+++ +I YTREAG+RNLER
Sbjct: 611 VISIPGYTMQEKLAIARRYLLPRQARENGLSPREVTVPDALIERIITGYTREAGLRNLER 670
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+ +L R A + AE E+
Sbjct: 671 EIGSLCRKVARRKAEGEK------------------------------------------ 688
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
FR+T MLEK+LG PRF D E E PG+++GL WT +GGEV VE T
Sbjct: 689 -GPFRVTP------RMLEKLLGAPRFIDEE-KEAELLPGVALGLAWTPYGGEVLHVEVTP 740
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
M+GKG + +TGQLGDV+KESAQ A+++ R+RA L + + L D+HIH PAGA
Sbjct: 741 MKGKGGVTMTGQLGDVMKESAQAAISYARSRAEQLGIEPDFSEKL----DLHIHVPAGAT 796
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGVT+VTAL+S + K VR+D MTGE+TLRG VLPVGG+K+KILA G++
Sbjct: 797 PKDGPSAGVTMVTALLSAITGKSVRSDLCMTGEITLRGRVLPVGGIKEKILAGVARGMQH 856
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
VI+P +N+KDL ++PA +L +++ ++D+L AF G
Sbjct: 857 VIIPRQNVKDLEDIPADLLRRIQVHPVAHIDDLLPLAFPKG 897
>gi|193786557|dbj|BAG51340.1| unnamed protein product [Homo sapiens]
Length = 571
Score = 627 bits (1616), Expect = e-176, Method: Compositional matrix adjust.
Identities = 315/573 (54%), Positives = 411/573 (71%), Gaps = 22/573 (3%)
Query: 253 MPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLD 312
MP K KE++RLKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD
Sbjct: 1 MPEQAHKVCVKEIKRLKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLD 59
Query: 313 SDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRIS 372
+DHY + ++K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+
Sbjct: 60 NDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIA 119
Query: 373 LGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALL 432
LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALL
Sbjct: 120 LGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALL 179
Query: 433 EVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLR 492
EVLDPEQN F DHYLNV FDLS+V+F+ATAN IP LLDRME+I++PGYT EEK+
Sbjct: 180 EVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIE 239
Query: 493 IAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVA 552
IA RHLIP+ L+QHGL + +QIP+ +I RYTREAGVR+L+R L A+ RA AVKVA
Sbjct: 240 IAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVA 299
Query: 553 E-QEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SP 607
E Q +E L S R G E I E +S+T + P
Sbjct: 300 EGQHKEAKLDRSDVTEREGC--------------REHILEDEKPESISDTTDLALPPEMP 345
Query: 608 LVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHL 667
+++D L+ +LGPP + + E ++R++ PG+++GL WT GGE+ FVEA+ M G+G+L L
Sbjct: 346 ILIDFHALKDILGPPMY-EMEVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGEGQLTL 404
Query: 668 TGQLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAG 726
GQLGDV+KESA +A++W+R+ A QL G +LL DIH+HFPAGAV KDGPSAG
Sbjct: 405 AGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAG 464
Query: 727 VTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNL 786
VT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K+VI+P RN
Sbjct: 465 VTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVIIPRRNE 524
Query: 787 KDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
KDL +P V L + A +++VL AF+GG
Sbjct: 525 KDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGG 557
>gi|217967942|ref|YP_002353448.1| ATP-dependent protease La [Dictyoglomus turgidum DSM 6724]
gi|217337041|gb|ACK42834.1| ATP-dependent protease La [Dictyoglomus turgidum DSM 6724]
Length = 792
Score = 627 bits (1616), Expect = e-176, Method: Compositional matrix adjust.
Identities = 337/752 (44%), Positives = 475/752 (63%), Gaps = 70/752 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T + ++GL R V E Y+ A++ +E E+VE+ + + R +
Sbjct: 91 TLRLFVQGLQRIRVVEFIETEPYFKAKVEVIE------EKVEKTVEIEGMMRNLLNLFQK 144
Query: 129 LISVLEQKQKTGGRTKVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSK 185
+ S++ Q + ++L+ + I +LAD + ++ E+ +L+++D+K RL K
Sbjct: 145 MASLIPQFPE-----ELLINAMNIQEPGRLADFIAFNTNLNINEKQEILETIDIKERLQK 199
Query: 186 ATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALE 245
T + R L+ + +A KI +V+ ++ KSQKE+ LRQQM+AI++ELG+ D E ++ L
Sbjct: 200 VTYYLTRELEILEIANKIQNEVKNEIEKSQKEYFLRQQMKAIQKELGEIDPREMEINELR 259
Query: 246 RKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLK 305
+K+Q A +P K ++EL RL M P YT +R YL+ + LPW K++E+ +LD+K
Sbjct: 260 QKLQEAKLPPEAMKEAERELERLALMPPGSAEYTVTRTYLDWLISLPWAKSTED-NLDIK 318
Query: 306 AAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALG 365
A+E L+ DHY L +VK+RI+EYLAVRKLK D +GP+LCFVGPPGVGKTSL SIA ALG
Sbjct: 319 RAEEILNEDHYDLEKVKERILEYLAVRKLKSDMKGPILCFVGPPGVGKTSLGKSIARALG 378
Query: 366 RKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRG 425
RKF+RISLGG++DEA+IRGHRRTY+G++PGR+I G+++ NPV +LDEIDK GSD RG
Sbjct: 379 RKFVRISLGGIRDEAEIRGHRRTYVGALPGRIIQGMRKAESNNPVFMLDEIDKLGSDFRG 438
Query: 426 DPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGY 485
DPA+ALLEVLDPEQN F D+YL VPFDLSKV+F+ATAN IPP LLDRMEVIELPGY
Sbjct: 439 DPAAALLEVLDPEQNNAFVDNYLGVPFDLSKVMFIATANVLYTIPPALLDRMEVIELPGY 498
Query: 486 TPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALAR 545
T +K+ IA LIPR L +HGL +E ++ + ++ +I+ YTREAGVRNLER +A++ R
Sbjct: 499 TEYQKMGIAKGFLIPRQLKEHGLENEQIEFTDDAIRKIIREYTREAGVRNLEREIASIIR 558
Query: 546 AAAVKVAEQE-QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRI 604
A +AE E+ L ++D+ +
Sbjct: 559 KIAKGIAEGSITEKVLVKAEDISKY----------------------------------- 583
Query: 605 TSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGE 664
LGP R+ E+ G++ GL WT GG++ FVEA + GKG
Sbjct: 584 --------------LGPERYTFGMKGEKDEI-GVATGLAWTEAGGDILFVEALVVEGKGN 628
Query: 665 LHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPS 724
L LTG+LG+V++ESA+ AL++VR+R DL + E LL+ DIH+H P+GA+PKDGPS
Sbjct: 629 LILTGKLGEVMQESAKTALSYVRSRLKDLNVSYE----LLEKSDIHVHVPSGAIPKDGPS 684
Query: 725 AGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPER 784
AGVT+ TA+ S +RK V+ D MTGE+TLRG VLPVGG+++K+LAAHR G+ VI+P+
Sbjct: 685 AGVTIATAIASALTRKPVKKDIGMTGEITLRGKVLPVGGIREKVLAAHRAGLTAVIMPKE 744
Query: 785 NLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N KDL E+P V + + ++VL A
Sbjct: 745 NKKDLEEIPEEVKKEMTFYFVEHADEVLNLAL 776
>gi|114330973|ref|YP_747195.1| ATP-dependent protease La [Nitrosomonas eutropha C91]
gi|114307987|gb|ABI59230.1| ATP-dependent protease La [Nitrosomonas eutropha C91]
Length = 791
Score = 626 bits (1615), Expect = e-176, Method: Compositional matrix adjust.
Identities = 329/750 (43%), Positives = 482/750 (64%), Gaps = 65/750 (8%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T+ + G+ RF ++EL + ARI + T + QVE AL+ Q + AME
Sbjct: 92 THHAICLGIERFRIKELVEGYPFIAARIQRIPETIPDTTQVE------ALTLQLRERAME 145
Query: 129 LISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATE 188
++S+L L T LADI + + E+ +L+++D++ RL K +
Sbjct: 146 ILSLL--PGVPAELAHALQATRSPSDLADITASLLDTEVAEKQALLETIDIEERLHKVLQ 203
Query: 189 LVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKM 248
++ R ++ +R++++I ++ + Q+ +++FLLR+Q++AI++ELG+ ++E ++ L+ +
Sbjct: 204 ILARRIEVLRLSQEIGERTKEQMEDRERKFLLREQLKAIQKELGEEGENEQEVAKLDEAI 263
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAK 308
+AGMP +I + +KEL+RL++M ++ YLE I +LPW K EE ++L AA+
Sbjct: 264 TAAGMPEDIEQQTRKELQRLQRMPAASSEFSMLHTYLEWITELPW-KLPEETPINLDAAR 322
Query: 309 ERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF 368
L++DH+GL R+KQRIIE+LAV+KLKP R P+LCFVGPPGVGKTSL SIA AL R F
Sbjct: 323 SILEADHFGLERIKQRIIEFLAVQKLKPQGRAPILCFVGPPGVGKTSLGQSIARALQRPF 382
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
+R+SLGG+ DEA++RGHRRTY+G+MPG ++ L++ G N VM+LDEIDK + GDP+
Sbjct: 383 VRVSLGGIHDEAEMRGHRRTYVGAMPGNIVQNLRKAGARNCVMMLDEIDKMTASAHGDPS 442
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
+ALLE+LDPEQN TF D+YL VPFDLS+V+F+ATAN + PP+ DRME+I+LPGYTPE
Sbjct: 443 AALLEILDPEQNATFRDNYLGVPFDLSRVVFIATANVIDQVSPPVRDRMEIIDLPGYTPE 502
Query: 489 EKLRIAMRHLIPRVLDQHGLG-SEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAA 547
EKL+IA R+L+ R + +GL + + +PEA+ + +I YTREAGVR ER + + R A
Sbjct: 503 EKLQIAQRYLVQRQSEANGLQLDQCILLPEAL-QSIIANYTREAGVRQFEREIGRIMRHA 561
Query: 548 AVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSP 607
A+K+A+ EQ+Q
Sbjct: 562 ALKIAQGEQQQ------------------------------------------------- 572
Query: 608 LVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHL 667
+ +D L +LGP ++ + E A R + G++ GL WT GG++ F+EAT + G G L L
Sbjct: 573 VRIDANNLMDILGPEKY-EHELALRTSLSGVATGLAWTPAGGDILFIEATRVSGSGRLIL 631
Query: 668 TGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGV 727
TGQLGDV+KESAQ ALT V+ARA+DL + A ++ G D+H+H PAGA+PKDGPSAGV
Sbjct: 632 TGQLGDVMKESAQAALTLVKARASDLNIAA----SMFDGIDVHLHVPAGAIPKDGPSAGV 687
Query: 728 TLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLK 787
+ TAL SLF+ + VR D AMTGE++LRGLVLPVGG+K+KILAA R GI+ V+LP RN K
Sbjct: 688 AMFTALASLFTNQLVRHDVAMTGEISLRGLVLPVGGIKEKILAAQRAGIQTVLLPARNRK 747
Query: 788 DLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
DL +VP A+ +++ + + +D + A +
Sbjct: 748 DLHDVPEAIRTTMQFVFLETADDAIRAALD 777
>gi|308272581|emb|CBX29185.1| ATP-dependent protease La 2 [uncultured Desulfobacterium sp.]
Length = 789
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 341/776 (43%), Positives = 475/776 (61%), Gaps = 78/776 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G++A L +++ + + ++++GL RF V E Y AR+ ++ + + ++
Sbjct: 85 GISAVILRMAKSYDNSTQ-----LLVQGLSRFRVLEFIEGKPYLMARVEHIKDKETKGKE 139
Query: 109 VEQDPD-----FIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASF 163
E F + ++ S+ + Q+ G LAD+ +
Sbjct: 140 AEALVSNMLSLFTRIVELTPGLPKDMASMAKSIQEPG-------------MLADMVASVI 186
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ +E+ ++++ D++ RL + T+ HL+ + + KI +V+G + K Q+E+ LRQQ
Sbjct: 187 NTTLDEKQKIIETEDVRKRLKEVTKQATHHLEILELGNKIQTQVKGDMDKGQREYYLRQQ 246
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
++AIKEELG+ DD ++ + K++ +P K ++EL RL +M P YT +
Sbjct: 247 LKAIKEELGEKDDSGVEVEEYKTKVKEKNLPPEALKEAERELNRLSRMHPSSAEYTVAST 306
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + LPW ++++ +LD+K A++ LD DHYGL + K+RIIE+LAVRKLKP+++GP+L
Sbjct: 307 YLDWLTTLPWNDSTKD-NLDIKKARKVLDEDHYGLEKAKKRIIEFLAVRKLKPESKGPIL 365
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
CF GPPG GKTSL SIA ALGRKFIRISLGGV DEA+IRGHRRTYIG++PGR+I G++
Sbjct: 366 CFAGPPGTGKTSLGKSIARALGRKFIRISLGGVHDEAEIRGHRRTYIGALPGRIIQGIRT 425
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
G NP+ +LDEIDK GSD RGDP+SALLEVLDPEQN +F+DHYL+VPFDLSKV+F+ TA
Sbjct: 426 AGANNPIFMLDEIDKVGSDFRGDPSSALLEVLDPEQNFSFSDHYLDVPFDLSKVMFITTA 485
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IPP L DRMEV+EL GY +EKL+IA RHLIPR ++ HGL S + VK +
Sbjct: 486 NVLHTIPPALRDRMEVLELLGYMEDEKLKIANRHLIPRQMEAHGLKSGNIVFSAGAVKKI 545
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I YTREAG+RNLER +A + R A VAE G
Sbjct: 546 ISGYTREAGLRNLEREIATICRGVATSVAE---------------------------GTA 578
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
+E+ +V N + K LGP R E R + PG++ GL
Sbjct: 579 KHVEI--------KVQN--------------ISKYLGPERLYP-EVLARTSTPGVATGLA 615
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ FVEATAM+GK L LTGQLGDV+KESA ALT++R+ A L + ED
Sbjct: 616 WTQSGGEILFVEATAMKGKRGLILTGQLGDVMKESATAALTFIRSNAKLLD-IDED---Y 671
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ +IHIH PAGA+PKDGPSAGVT++TA+ SL K + AMTGE+TLRG +LPVGG
Sbjct: 672 FENNEIHIHVPAGAIPKDGPSAGVTMLTAIYSLLKNKPIEKYLAMTGEITLRGQLLPVGG 731
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
+K+K+LAA+ GIK +ILP+ N KDL EVP V +++ A +M DVL+ A +
Sbjct: 732 IKEKVLAAYNIGIKTLILPKWNEKDLFEVPKKVQKAIKFHFADKMIDVLKIAIKNN 787
>gi|410666837|ref|YP_006919208.1| ATP-dependent protease La [Thermacetogenium phaeum DSM 12270]
gi|409104584|gb|AFV10709.1| ATP-dependent protease La [Thermacetogenium phaeum DSM 12270]
Length = 801
Score = 624 bits (1610), Expect = e-176, Method: Compositional matrix adjust.
Identities = 346/770 (44%), Positives = 476/770 (61%), Gaps = 78/770 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T+ V++EGL R ++E + + + E + E P+ AL R
Sbjct: 98 PGG--TFRVLVEGLRRGRIKEYLAQEPFIKVMVEEFE------DSCEITPEIEALMRS-- 147
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
+I E+ KTG + + + V I +LADI A + ++ +L++ D
Sbjct: 148 -----VIGQFEEYVKTGKKIPPETAVSIVSIDEPGRLADIIAAHINLHVGDKQAILEAFD 202
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
K RL + E++ R ++ + + KI +V Q+ ++QKE+ LR+QMRAI++ELG+ D+
Sbjct: 203 PKERLERLAEILSREMEILELERKINMRVRKQMERTQKEYYLREQMRAIQKELGEKDERT 262
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
++ L ++ A P + + KE+ RL+KM P R Y++ + LPW K +
Sbjct: 263 AEVEELRERIAEANFPKEVEEKALKEVERLEKMPPMVAEAVVVRNYIDWLLALPWSKETR 322
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ L+L A+E L++DHYGL + K+RI+EYLA+RKL RGP+LCFVGPPGVGKTSLA
Sbjct: 323 D-RLNLGKAEEILEADHYGLQKPKERILEYLAIRKLATKMRGPILCFVGPPGVGKTSLAR 381
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA ALGRKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I G+++ G NPV LLDE+DK
Sbjct: 382 SIARALGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGMRQAGTKNPVFLLDEVDK 441
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
SD RGDP+SALLEVLD EQN F+DHY+ VPFDLSKV+F+ TAN IP PLLDRME
Sbjct: 442 LSSDFRGDPSSALLEVLDAEQNHAFSDHYIEVPFDLSKVMFITTANVEYNIPRPLLDRME 501
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI L GYT EEK+RIA RHLIP+ + +HGL S LQI E ++ +I+ YTREAGVRNLER
Sbjct: 502 VIHLSGYTEEEKVRIAERHLIPKQVKEHGLKSHHLQISENALRRIIREYTREAGVRNLER 561
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+AA+ R A +V + + Q
Sbjct: 562 EIAAICRKTAREVVKDKNYQV--------------------------------------- 582
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
++T+ A +E LG PR+ A E+ + G++VGL WT GGEV VE +
Sbjct: 583 ----KVTA------ANVEAFLGIPRY-RYGAIEKKSEVGVAVGLAWTEVGGEVLNVEVSI 631
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
++GKG + LTG+LGDV+KESAQ A ++VR+R+++L + E + DIHIH P GA+
Sbjct: 632 LKGKGNIMLTGKLGDVMKESAQAAFSYVRSRSSELGITGE----FHEKCDIHIHIPEGAI 687
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+T+ TAL S S + R D AMTGE+TLRG VLPVGG+K+K+LAAHR GIK
Sbjct: 688 PKDGPSAGITMATALASALSGRPTRHDVAMTGEITLRGRVLPVGGIKEKVLAAHRAGIKT 747
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
VILP N KDL E+PA V L+ +L + M+ VL +A P + H ++
Sbjct: 748 VILPAENKKDLEEIPANVKRKLKFVLVENMDQVLSEAL---LPAQDHREV 794
>gi|239909100|ref|YP_002955842.1| ATP-dependent protease La [Desulfovibrio magneticus RS-1]
gi|239798967|dbj|BAH77956.1| ATP-dependent protease La [Desulfovibrio magneticus RS-1]
Length = 808
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 342/757 (45%), Positives = 483/757 (63%), Gaps = 67/757 (8%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFI 116
+ R ++ P GR+ V+++GL R V + S+ Y A+I L + +EQ+
Sbjct: 105 IMRMLKMPDGRLK--VLVQGLTRARVTDFSSADPYLAAKIEVLAERDPKEATLEQE---- 158
Query: 117 ALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
A+ R + + +++S+ + + VL +LAD+ ++ + EE +L+
Sbjct: 159 AMMRAAREQSEKILSL--RGMASADIMAVLNSVNEPGRLADLVASNLRMRVEEAQRLLEC 216
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
D RL + + + + + KI + + K+QK+F LR+Q++AI+ ELG+ +
Sbjct: 217 EDPVERLRLVNDQLVKEAEVAAMQAKIQNMAKEGMDKAQKDFFLREQLKAIRRELGEGGE 276
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+ DDL L+ + AGMP + K K+L+RL M P R YL+ + +LPW+K
Sbjct: 277 ESDDLDELKEALDKAGMPKEVKKEADKQLKRLVSMHPDSSEAGVIRTYLDWMVELPWKKL 336
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
S++ LD+K AK LD DH+ L +VK+RI+EYL+VRKL P +GP+LCFVGPPGVGKTSL
Sbjct: 337 SKD-RLDIKEAKRILDEDHFDLEKVKERILEYLSVRKLNPGMKGPILCFVGPPGVGKTSL 395
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
SIA ALGRKF+R+SLGG++DEA+IRGHRRTYIGSMPGR+I +K+ G NPV++LDEI
Sbjct: 396 GRSIARALGRKFVRMSLGGMRDEAEIRGHRRTYIGSMPGRVIQSIKQAGTRNPVIMLDEI 455
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK GSD RGDP+SALLEVLDPEQN TF+DHYLNVPFDLSKV+F+ TAN IPPPLLDR
Sbjct: 456 DKVGSDFRGDPSSALLEVLDPEQNNTFSDHYLNVPFDLSKVMFICTANILDTIPPPLLDR 515
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
ME+I LPGYT +EK++IA R+++PR ++++GL +E + + + +V +I+ YTREAG+RNL
Sbjct: 516 MELIRLPGYTEQEKVKIARRYILPRQIEENGLVAEDVSLSDQVVAKIIRDYTREAGLRNL 575
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER + ++ R A + AE E+
Sbjct: 576 EREVGSVCRKLARRKAEGEEP--------------------------------------- 596
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRF--DDREAAERVAAPGISVGLVWTNFGGEVQFV 654
FR+T+ + LEK+LGP RF D+REA PG++VGL WT GG + +
Sbjct: 597 ----PFRVTA------SSLEKLLGPARFMDDEREAD---LPPGVAVGLAWTPVGGAILHI 643
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFP 714
EA + GKG L LTG+LG+V+KESAQ ALT+ ++RA +L + E + + DIHIH P
Sbjct: 644 EAATLPGKGGLQLTGKLGEVMKESAQAALTYAKSRAKELGIAPE----MFEKNDIHIHVP 699
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
AGA PKDGPSAGVTLVTAL+SL + V D AMTGE+TLRG VLPVGG+K+KILAA
Sbjct: 700 AGATPKDGPSAGVTLVTALISLLTNTPVHNDLAMTGEITLRGRVLPVGGIKEKILAAVAA 759
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
G+KRVI+P +N+KD+ ++P + L+I+ +R+++V
Sbjct: 760 GMKRVIIPAKNMKDIHDIPKDLRGRLKIMPVERIDEV 796
>gi|158521113|ref|YP_001528983.1| ATP-dependent protease La [Desulfococcus oleovorans Hxd3]
gi|302425048|sp|A8ZX50.1|LON_DESOH RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|158509939|gb|ABW66906.1| ATP-dependent protease La [Desulfococcus oleovorans Hxd3]
Length = 817
Score = 624 bits (1608), Expect = e-175, Method: Compositional matrix adjust.
Identities = 319/664 (48%), Positives = 441/664 (66%), Gaps = 55/664 (8%)
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LAD+ ++ S EE+ +L+++D+K+RL K T ++ L+ +++ +KI +++ + K
Sbjct: 177 LADMVASTINSSTEEKQNILETLDVKLRLKKVTRQLNHQLEILKLGDKIQSQIKEDMDKQ 236
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
QKEF LR+Q++AI+EELG+ ++ + K++ +P +K +EL R +M P
Sbjct: 237 QKEFYLRKQLKAIREELGEKEEGNVEAEEYRTKIEEGNLPEEAYKAATRELERFSRMHPS 296
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
YT S YL+ + LPW+K +E+ LD+K A+ LD DH+GL + K+RI+EYLAVRKL
Sbjct: 297 SSEYTVSSTYLDWLTTLPWDKQTED-HLDIKKARAILDKDHFGLEKPKKRILEYLAVRKL 355
Query: 335 KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
PD++GP+LCF+GPPG GKTSL SIA ALGR+FIRISLGGV+DEA+IRGHRRTY+G++P
Sbjct: 356 NPDSKGPILCFLGPPGTGKTSLGRSIARALGREFIRISLGGVRDEAEIRGHRRTYVGALP 415
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
GR+I +++ G NPV +LDEIDK G+D +GDP+SALLEVLDPEQN +F DHYL+V FDL
Sbjct: 416 GRIIQEIRKAGTNNPVFMLDEIDKVGADFKGDPSSALLEVLDPEQNFSFADHYLDVSFDL 475
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
S+V+FVATAN IPP L DRMEVI L GYT EEK++IA ++LIPR ++GL ++ +
Sbjct: 476 SRVMFVATANVIDTIPPALRDRMEVIGLRGYTLEEKVKIARQYLIPRQRKENGLAAKHIS 535
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLL 574
++ ++ +I YTREAG+RN ER +A++ R A K+AE
Sbjct: 536 FSQSAIRHIISDYTREAGLRNAEREIASVCRGVAAKIAE--------------------- 574
Query: 575 DNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVA 634
G +V + P E +E LGP RF E E
Sbjct: 575 ------GKKVSGAIKP--EDLYEY--------------------LGPVRFTS-ETGENAL 605
Query: 635 APGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQ 694
PG+ +GL WT GGE+ F+EAT+M+GK L LTGQLGDV+KESA AL+++RA A D
Sbjct: 606 TPGVVMGLAWTPVGGEILFIEATSMKGKRGLTLTGQLGDVMKESATAALSFIRAHARDYD 665
Query: 695 LVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTL 754
+ ED D HIH P+GA+PKDGPSAGVT++TALVSL + ++V+ AMTGE+TL
Sbjct: 666 -IDED---FFDKYDFHIHVPSGAIPKDGPSAGVTMLTALVSLLTGRKVKKGLAMTGEITL 721
Query: 755 RGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQ 814
RG V+PVGG+K+K++AAHR GIK VILP N KDL E+PA V ++++ A++M DVLE
Sbjct: 722 RGKVMPVGGIKEKVIAAHRAGIKEVILPRPNKKDLEEIPAKVKSAMKFHFAEKMGDVLEL 781
Query: 815 AFEG 818
A G
Sbjct: 782 ALNG 785
>gi|347734281|ref|ZP_08867331.1| ATP-dependent protease La [Desulfovibrio sp. A2]
gi|347516947|gb|EGY24142.1| ATP-dependent protease La [Desulfovibrio sp. A2]
Length = 872
Score = 623 bits (1607), Expect = e-175, Method: Compositional matrix adjust.
Identities = 343/758 (45%), Positives = 474/758 (62%), Gaps = 63/758 (8%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P R+ V+++G+ R VQ Y TAR+ +L ++ VEQ+ A+
Sbjct: 175 RMLKMPDNRLK--VLVQGISRAKVQSFGVGDGYLTARVETLPEPELGPPTVEQE----AM 228
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
R + + +++S+ + T VL +LAD+ A+ + + +L+ D
Sbjct: 229 MRAAREQSEKILSL--RGIATSDIMAVLNSVDDPGRLADLIAANLRMKVSDAQAILECTD 286
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
RL E + + ++ + KI + K+QK++ LR+QM+AI+ ELG++ +++
Sbjct: 287 PDARLRLVNEQLVKEVEVASMQAKIQSMAREGMDKAQKDYFLREQMKAIRRELGESGNED 346
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
++L L R ++ AG+P + K K+LRRL M P T R YLE +A+LPW K S
Sbjct: 347 EELEDLTRSLERAGLPREVRKEADKQLRRLASMHPDSSEATVVRTYLEWLAELPWAKLSR 406
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD+ AK LD DH+GL +VK RI+EYL+VRKL P ++GP+LCF GPPGVGKTSL
Sbjct: 407 D-RLDINKAKVILDEDHHGLAKVKDRILEYLSVRKLNPKSKGPILCFAGPPGVGKTSLGR 465
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A+GRKF RISLGG++DEA+IRGHRRTYIG+MPGR++ LK++ NPV++LDEIDK
Sbjct: 466 SIARAMGRKFQRISLGGMRDEAEIRGHRRTYIGAMPGRIVQSLKQLATRNPVLMLDEIDK 525
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD RGDP+SALLEVLDPEQN +F+DHYLNVPFDLSKV+F+ TAN+ IP L DRME
Sbjct: 526 IGSDFRGDPSSALLEVLDPEQNFSFSDHYLNVPFDLSKVMFICTANQLDTIPAALRDRME 585
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI +PGYT +EKL IA R+L+PR ++GL + +P+A+++ +I YTREAG+RNLER
Sbjct: 586 VISIPGYTMQEKLAIARRYLLPRQARENGLSPREVTVPDALIERIITGYTREAGLRNLER 645
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+ +L R A + AE E+
Sbjct: 646 EIGSLCRKVARRKAEGEK------------------------------------------ 663
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
FRIT MLEK LG PRF D E E PG+++GL WT +GGEV VE T
Sbjct: 664 -GPFRITP------RMLEKFLGAPRFIDEE-KETELLPGVALGLAWTPYGGEVLHVEVTP 715
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
M+GKG + +TGQLGDV+KESAQ A+++ R+RA L + + L D+HIH PAGA
Sbjct: 716 MKGKGGVTMTGQLGDVMKESAQAAISYARSRAERLGIEPDFSEKL----DLHIHVPAGAT 771
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGVT+VTAL+S + K VR D MTGE+TLRG VLPVGG+K+KILA G++
Sbjct: 772 PKDGPSAGVTMVTALLSALTGKPVRNDLCMTGEITLRGRVLPVGGIKEKILAGVARGMQH 831
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
VI+P +N+KDL ++PA +L +E+ ++D+L AF
Sbjct: 832 VIIPRQNMKDLEDIPADLLRRIEVHPVAHIDDLLPLAF 869
>gi|120602910|ref|YP_967310.1| ATP-dependent protease La [Desulfovibrio vulgaris DP4]
gi|120563139|gb|ABM28883.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Desulfovibrio vulgaris DP4]
Length = 856
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 343/762 (45%), Positives = 485/762 (63%), Gaps = 69/762 (9%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GR+ V+++G+ R V ++ + +AR++ + VEQ+ A+
Sbjct: 159 RMLKMPDGRIK--VLVQGVTRAHVDAFTSEEPHISARVTPMPEVDSGPLTVEQE----AM 212
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
R + + +++S+ + T VL +LAD+ A+ + + +L+ VD
Sbjct: 213 MRTAREQSEKILSL--RGISTSEIMSVLNSVDEPGRLADLIAANLRMKVSDAQDILECVD 270
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
RL + + + + + KI + K+QK++ LR+Q++AI+ ELG++ +++
Sbjct: 271 PVARLELVNKQLMKEAEVASMQAKIQSMAREGMDKAQKDYFLREQLKAIRRELGESGNED 330
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
++L L R + A +P ++ K K+LRRL M P T +R YLE +++LPW K S
Sbjct: 331 EELEELARALDIAKLPRDVRKEADKQLRRLAAMHPDSSEATVTRTYLEWLSELPWRKLSR 390
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD++ AK LD DH+GL +VK RI+EYL+VRKL PD++GP+LCF GPPGVGKTSL
Sbjct: 391 D-RLDIRKAKVILDEDHFGLDKVKDRILEYLSVRKLNPDSKGPILCFAGPPGVGKTSLGR 449
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA LGRKF RISLGG++DEA+IRGHRRTYIGSMPGR+I LK+ G NPV++LDEIDK
Sbjct: 450 SIARTLGRKFQRISLGGMRDEAEIRGHRRTYIGSMPGRIIQSLKQCGTRNPVIMLDEIDK 509
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
G+D RGDP+SALLEVLDPEQN +F+DHYLNVPFDLSKV+F+ TAN+ IP PL DRME
Sbjct: 510 IGADFRGDPSSALLEVLDPEQNWSFSDHYLNVPFDLSKVMFICTANQLDTIPAPLRDRME 569
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
+I +PGYT +EK+ IA RHL+PR +GLG + I +A ++ +++ YTREAG+RNLER
Sbjct: 570 IISIPGYTMQEKVAIARRHLVPRQATSNGLGENEITIGDAAIETLVRGYTREAGLRNLER 629
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+ ++ R A R A+GA+
Sbjct: 630 EIGSVCRKLA---------------------------RRKAEGAK--------------- 647
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
FR+T A+ +K+LG PRF + E E+ PG+++GL WT +GGEV VE +
Sbjct: 648 -GPFRVTP------ALTQKLLGAPRFLEDE-HEKELLPGVALGLAWTPYGGEVLNVEVSP 699
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL---VAEDGMNLLQGRDIHIHFPA 715
++GKG+L LTGQLGDV+KESAQ A+++ R+RA +L + AED RD+HIH PA
Sbjct: 700 LKGKGKLILTGQLGDVMKESAQAAVSYARSRAEELDIDPGFAED-------RDLHIHVPA 752
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAGVTLVTAL+S + + VR+D MTGE+TLRG VLPVGG+K+KILA G
Sbjct: 753 GATPKDGPSAGVTLVTALISALTGRPVRSDLCMTGEITLRGRVLPVGGIKEKILAGVARG 812
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K V++P +N KDL +VPA +L +E+ LA ++DVL AF+
Sbjct: 813 LKHVVIPAQNAKDLEDVPADLLRRIEVHLASHIDDVLPVAFK 854
>gi|206900151|ref|YP_002251270.1| ATP-dependent protease La [Dictyoglomus thermophilum H-6-12]
gi|302425051|sp|B5YFG2.1|LON_DICT6 RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|206739254|gb|ACI18312.1| ATP-dependent protease La [Dictyoglomus thermophilum H-6-12]
Length = 792
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 336/751 (44%), Positives = 474/751 (63%), Gaps = 68/751 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T + ++GL R V E Y+ A++ +E E+VE+ + + R +
Sbjct: 91 TLRLFVQGLQRIRVIEFLETEPYFKAKVEVIE------EKVEKTVEIEGMMRNLLNLFQK 144
Query: 129 LISVLEQKQKTGGRTKVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSK 185
+ S++ Q + ++L+ + I +LAD + ++ E+ +L+++D+K RL K
Sbjct: 145 MASLIPQFPE-----ELLINAMNIQEPGRLADFIAFNTNLNINEKQEILETIDVKERLQK 199
Query: 186 ATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALE 245
T + R L+ + +A KI +V+ ++ KSQKE+ LRQQM+AI++ELG+ D E ++ L
Sbjct: 200 VTYYLTRELEILEIANKIQNEVKNEIEKSQKEYFLRQQMKAIQKELGEIDPREMEINELR 259
Query: 246 RKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLK 305
+K+Q A +P K ++EL RL M P YT +R YL+ + LPW ++E+ +LD+K
Sbjct: 260 QKLQEAKLPPEAMKEAERELERLSLMPPGSAEYTVTRTYLDWLISLPWAISTED-NLDIK 318
Query: 306 AAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALG 365
A+E L+ DHY L +VK+RI+EYLAVRKLK D +GP+LCFVGPPGVGKTSL SIA ALG
Sbjct: 319 RAEEILNEDHYDLEKVKERILEYLAVRKLKSDMKGPILCFVGPPGVGKTSLGKSIARALG 378
Query: 366 RKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRG 425
RKF+RISLGG++DEA+IRGHRRTY+G++PGR+I G+++ NPV +LDEIDK GSD RG
Sbjct: 379 RKFVRISLGGIRDEAEIRGHRRTYVGALPGRIIQGIRKAESNNPVFMLDEIDKLGSDFRG 438
Query: 426 DPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGY 485
DPA+ALLEVLDPEQN F D+YL VPFDLSKV+F+ATAN IPP LLDRMEVIELPGY
Sbjct: 439 DPAAALLEVLDPEQNNAFVDNYLGVPFDLSKVMFIATANVLYTIPPALLDRMEVIELPGY 498
Query: 486 TPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALAR 545
T +K+ IA LIPR L +HGL E ++ + ++ +I+ YTREAGVRNLER +A++ R
Sbjct: 499 TEYQKMGIAKGFLIPRQLKEHGLEKEQIEFSDDAIRKIIREYTREAGVRNLEREIASIIR 558
Query: 546 AAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
A +AE GS IT
Sbjct: 559 KVAKGIAE----------------GS--------------------------------IT 570
Query: 606 SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGEL 665
++V + K LGP ++ E+ G++ GL WT GG++ FVEA + GKG L
Sbjct: 571 EKVIVKVEDVPKYLGPEKYTYGMKGEKDEV-GVATGLAWTEAGGDILFVEALVVEGKGNL 629
Query: 666 HLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSA 725
LTG+LG+V++ESA+ AL++VR++ DL + E LL+ DIH+H P+GA+PKDGPSA
Sbjct: 630 ILTGKLGEVMQESAKTALSYVRSKLKDLNVSYE----LLEKADIHVHVPSGAIPKDGPSA 685
Query: 726 GVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERN 785
GVT+ TA+ S +R+ V+ D MTGE+TLRG VLPVGG+++K+LAAHR G+ VI+P+ N
Sbjct: 686 GVTIATAIASALTRRPVKKDIGMTGEITLRGKVLPVGGIREKVLAAHRAGLTAVIMPKEN 745
Query: 786 LKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
KDL E+P V + + ++VL A
Sbjct: 746 KKDLEEIPEEVKKEITFYFVEHADEVLNLAL 776
>gi|302344647|ref|YP_003809176.1| ATP-dependent protease La [Desulfarculus baarsii DSM 2075]
gi|301641260|gb|ADK86582.1| ATP-dependent protease La [Desulfarculus baarsii DSM 2075]
Length = 812
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 343/768 (44%), Positives = 483/768 (62%), Gaps = 70/768 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H+ GV A L +++ ++ + R+ V +GL RF V EL+ Y I ++
Sbjct: 97 HHVGVVALILRMNKEEDQNAMRL----VAQGLSRFRVVELTRTEPYLVGTIEPVQ----- 147
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
+ V D + +AL + ++ + + V ++ L D+ ++ ++
Sbjct: 148 -DLVTNDMETMALFSNLRGLFKRMLDLAPHMPEELSTLAVGIDDP--GALCDLAASTIKL 204
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
E++ +++++D++ RL + T L++ +Q + + KI +V+ L K+Q+++ LRQQ++
Sbjct: 205 GPEDRQSVVEAIDVRERLRRVTTLLNHEIQVLELGSKIQSQVKEGLDKTQRDYYLRQQLK 264
Query: 226 AIKEELGDNDDD-EDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
AIK+ELG+ D+ E ++ L ++ A +P K Q+EL+RL KM Y Y
Sbjct: 265 AIKQELGEADEGGESEVEDLRARLAEAHLPEEADKEAQRELKRLAKMHSSSSEYHVISTY 324
Query: 285 LELIADLPWEKAS-EEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
L+ + LPW + + ++ID+D AA + L+ DH+GL +VKQRI+E+LAVRKL P+ +G +L
Sbjct: 325 LDWMTHLPWNQTTADQIDID--AAHKILEDDHFGLDKVKQRILEFLAVRKLNPEVQGSIL 382
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
CFVGPPGVGKTSL SIA ++GRKF RISLGGV+DEA+IRGHRRTY+G+MPGR+I ++R
Sbjct: 383 CFVGPPGVGKTSLGRSIARSMGRKFSRISLGGVRDEAEIRGHRRTYVGAMPGRIIQSIRR 442
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VG NPV++LDEIDK G+D RGDP+SALLEVLDPEQN++F+DHYL+V FDLSKV+FV TA
Sbjct: 443 VGSKNPVLMLDEIDKLGADFRGDPSSALLEVLDPEQNRSFSDHYLDVAFDLSKVMFVTTA 502
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PL DRME+IE+PGYT EEKL+IA R+L+PR HGLG+ L I + + +
Sbjct: 503 NVLDTIPAPLRDRMEIIEIPGYTAEEKLKIAKRYLVPRQRKLHGLGAANLAINDGAINAL 562
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
IQ YTREAG+RNLER + A+ R AA KVAE E + + D+ + P
Sbjct: 563 IQGYTREAGLRNLEREIGAVCRWAARKVAEGETAKIVVGRADLQEIRGP----------- 611
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
RF EAA R A PG++ G+
Sbjct: 612 --------------------------------------ARFSP-EAAMRTAMPGVATGMA 632
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ FVEAT M G+G L LTGQLGDV+KESAQ A+++VRA A L + E
Sbjct: 633 WTPTGGDILFVEATDMPGQGRLTLTGQLGDVMKESAQAAVSYVRANAERLGVDPE----F 688
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ RD+HIH PAGA+PKDGPSAGVTL TAL+SL + ++VR D +MTGE+TLRG+VLPVGG
Sbjct: 689 HKTRDLHIHVPAGAIPKDGPSAGVTLYTALLSLLTDRQVRPDVSMTGEITLRGMVLPVGG 748
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+K+K+LAA R GIK +ILP +N +DL +VP A L A+RM+ V
Sbjct: 749 IKEKVLAAKRAGIKEIILPAQNKRDLTDVPEAARQGLVFHFAERMDQV 796
>gi|322421229|ref|YP_004200452.1| ATP-dependent protease La [Geobacter sp. M18]
gi|320127616|gb|ADW15176.1| ATP-dependent protease La [Geobacter sp. M18]
Length = 815
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 340/771 (44%), Positives = 481/771 (62%), Gaps = 83/771 (10%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI----------SSLEMTKIEM 106
+ R ++ P GRV +V +GL + + E +Y+ RI ++LE +
Sbjct: 82 IMRMLKLPDGRVKILV--QGLTKGRITEYLAEKPFYSVRIDRVIEPTAPENTLESEALIR 139
Query: 107 EQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEIS 166
E+ +AL KA + E++ ++E Q+ G LAD+ ++ +
Sbjct: 140 TVKEELAKIVALG---KAVSPEVMVIVENMQEPGA-------------LADLVASNIGLK 183
Query: 167 FEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRA 226
EE +L+ +D RL + +L+++ + + + +I + ++ KSQ+E+ LR+Q+RA
Sbjct: 184 VEEAQGLLEVIDPLERLKRVNDLLNKESELLNMQARIQSAAKEEMGKSQREYYLREQLRA 243
Query: 227 IKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLE 286
I++ELG+ D +++ L + ++SA MP ++ K K+L RL++M P R +L+
Sbjct: 244 IQQELGETDARSEEMAELRKGIESAKMPPSVEKEALKQLGRLEQMHPDAAEAGMLRTFLD 303
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
+ D+PW K++++ L++ A E L+ DHY L +VK+RI+E+LAVRKLK +GP+LCFV
Sbjct: 304 WMVDIPWGKSTKDA-LEINRASEILNEDHYFLEKVKERILEFLAVRKLKKKMKGPILCFV 362
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTSL SIA A+GRKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I GLK+ G
Sbjct: 363 GPPGVGKTSLGKSIARAMGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGLKQAGS 422
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NPV +LDE+DK GSD RGDP+SALLEVLDPEQN +F+DHY+N+PF+LS V+F+ATAN+
Sbjct: 423 NNPVFMLDELDKLGSDFRGDPSSALLEVLDPEQNNSFSDHYINLPFNLSNVMFIATANQM 482
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
IP PL DRMEVI L GYT EEKL IA R+L+PR + ++G+ + E ++ +I +
Sbjct: 483 DTIPGPLRDRMEVITLAGYTEEEKLGIAKRYLVPRQVKENGISEDIAVFSEEALRTIISK 542
Query: 527 YTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEM 586
YTREAG+RNLER + ++ R A KVAE E+
Sbjct: 543 YTREAGLRNLEREIGSVCRKVARKVAEGRGEK---------------------------- 574
Query: 587 EVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTN 646
F IT+ V K LGPP+F E E+ G+ GL WT
Sbjct: 575 ---------------FVITAGTVA------KYLGPPKFLREEEMEKNEV-GVVTGLAWTP 612
Query: 647 FGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQG 706
GGEV FVEAT M+GKG L LTGQLGDV+KES Q AL+++R+R + Q + ED
Sbjct: 613 VGGEVLFVEATVMKGKGGLTLTGQLGDVMKESVQAALSYIRSRTAEFQ-IPED---FSST 668
Query: 707 RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKD 766
DIH+H PAGA+PKDGPSAGVT+ TALVS+ +R VR + AMTGE+TLRG VLP+GG+K+
Sbjct: 669 TDIHVHVPAGAIPKDGPSAGVTMATALVSVLTRIPVRKEVAMTGEITLRGKVLPIGGLKE 728
Query: 767 KILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
KILAA R G+ VI+P +N KDL +VP +L L+I+ A ++DVL A E
Sbjct: 729 KILAAARLGVTTVIIPVQNKKDLEDVPKTILKKLKIVTASNIDDVLAVALE 779
>gi|386811882|ref|ZP_10099107.1| ATP-dependent protease La [planctomycete KSU-1]
gi|386404152|dbj|GAB61988.1| ATP-dependent protease La [planctomycete KSU-1]
Length = 804
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 328/746 (43%), Positives = 468/746 (62%), Gaps = 65/746 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
++++G+ R + + + Y+ A+++ LE T VE D + AL F+ + + I
Sbjct: 115 MLVQGIRRVKIDKYTQIEPYFKAKVTILEDT------VESDKEMDAL---FRNASDQFIR 165
Query: 132 VLEQKQKTGGRTKVLLETV-PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
++ K+ + + +LAD+ + +S E+ +L++ ++K RL K T +
Sbjct: 166 MVNMVPTLPEELKIAIVNIDSPGRLADMIASHLNLSIAEKQQVLETTNVKDRLQKITAFL 225
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
R ++ + +A KI +V+ ++ K Q+E+ LRQQ++AI++ELG+ D+ ++ L++K++
Sbjct: 226 TREMEVMEMATKIQSQVKNEMEKGQREYYLRQQLKAIQDELGEGDERTVEIKELKKKIEE 285
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
A MP K V++EL RL K+ YT +R YL+L+ DLPW ++ + +LD++ A +
Sbjct: 286 AKMPPEAKKEVEQELNRLSKIPSASAEYTVARTYLDLLVDLPWSVSTID-NLDIQGAHKI 344
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
L+ DHY L +VK+RI+EYLAVRKLK D +GP+LCFVGPPG GKTSL SIA ALGRKF+R
Sbjct: 345 LNEDHYDLDKVKERILEYLAVRKLKQDMKGPILCFVGPPGTGKTSLGMSIARALGRKFVR 404
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV+DEA+IRGHRRTYIG++PGR+I GL++ G NP+ +LDEIDK G+D RGDP++A
Sbjct: 405 MSLGGVRDEAEIRGHRRTYIGALPGRIIQGLRKAGTNNPLFMLDEIDKLGADFRGDPSAA 464
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDPEQN +F+DHYL++PFDLSKV+F+ TAN P+PP L DRMEV+ELPGYT EEK
Sbjct: 465 LLEVLDPEQNHSFSDHYLDIPFDLSKVMFITTANILDPVPPALKDRMEVLELPGYTAEEK 524
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
+ I + IP+ L HGL + + I + ++ VI YTREAG+RNLER +A L R AA
Sbjct: 525 IFIVKQFSIPKQLKAHGLTKDQVTIDDDAIRSVITDYTREAGIRNLEREIATLCRKAAKA 584
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
+A E+ K VH V
Sbjct: 585 IASDEK-------KSVH------------------------------------------V 595
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
L LGP +F E AER G++ GL WT GG++ F+EAT M G G+L LTG
Sbjct: 596 SADQLYNFLGPIKFFS-EVAERTTEAGVATGLAWTQSGGDILFIEATTMPGTGKLTLTGH 654
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGD++KESAQ A++++RARA L + D D H+H PAGA+PKDGPSAGVT+
Sbjct: 655 LGDIMKESAQAAMSYIRARANKLGITLSD----FTKYDFHVHVPAGAIPKDGPSAGVTIA 710
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
AL+SL + AMTGE+TLRG +LPVGG+K+K+LAA R GI VILP+ N KDLV
Sbjct: 711 MALISLLKETPIVPYVAMTGEITLRGNILPVGGIKEKVLAAKRAGITTVILPKLNEKDLV 770
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAF 816
+VP + I ++++++L F
Sbjct: 771 DVPEQARKEMNFIFVEKVDEMLPIVF 796
>gi|46579602|ref|YP_010410.1| ATP-dependent protease La [Desulfovibrio vulgaris str.
Hildenborough]
gi|387152962|ref|YP_005701898.1| ATP-dependent protease La [Desulfovibrio vulgaris RCH1]
gi|46449017|gb|AAS95669.1| ATP-dependent protease La, putative [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233406|gb|ADP86260.1| ATP-dependent protease La [Desulfovibrio vulgaris RCH1]
Length = 856
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 343/762 (45%), Positives = 484/762 (63%), Gaps = 69/762 (9%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GR+ V+++G+ R V ++ + +AR++ + VEQ+ A+
Sbjct: 159 RMLKMPDGRIK--VLVQGVTRAHVDAFTSEEPHISARVTPMPEVDSGPLTVEQE----AM 212
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
R + + +++S+ + T VL +LAD+ A+ + + +L+ VD
Sbjct: 213 MRTAREQSEKILSL--RGISTSEIMSVLNSVDEPGRLADLIAANLRMKVSDAQDILECVD 270
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
RL + + + + + KI + K+QK++ LR+Q++AI+ ELG++ +++
Sbjct: 271 PVARLELVNKQLMKEAEVASMQAKIQSMAREGMDKAQKDYFLREQLKAIRRELGESGNED 330
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
++L L R + A +P ++ K K+LRRL M P T +R YLE +++LPW K S
Sbjct: 331 EELEELARALDIAKLPRDVRKEADKQLRRLAAMHPDSSEATVTRTYLEWLSELPWRKLSR 390
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD++ AK LD DH+GL +VK RI+EYL+VRKL PD++GP+LCF GPPGVGKTSL
Sbjct: 391 D-RLDIRKAKVILDEDHFGLDKVKDRILEYLSVRKLNPDSKGPILCFAGPPGVGKTSLGR 449
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA LGRKF RISLGG++DEA+IRGHRRTYIGSMPGR+I LK+ G NPV++LDEIDK
Sbjct: 450 SIARTLGRKFQRISLGGMRDEAEIRGHRRTYIGSMPGRIIQSLKQCGTRNPVIMLDEIDK 509
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
G+D RGDP+SALLEVLDPEQN +F+DHYLNVPFDLSKV+F+ TAN+ IP PL DRME
Sbjct: 510 IGADFRGDPSSALLEVLDPEQNWSFSDHYLNVPFDLSKVMFICTANQLDTIPAPLRDRME 569
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
+I +PGYT +EK+ IA RHL+PR +GLG + I +A ++ +++ YTREAG+RNLER
Sbjct: 570 IISIPGYTMQEKVAIARRHLVPRQATSNGLGENEITIGDAAIETLVRGYTREAGLRNLER 629
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+ ++ R A + AE GS
Sbjct: 630 EIGSVCRKLARRKAE----------------GS--------------------------- 646
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
FR+T A+ +K+LG PRF + E E+ PG+++GL WT +GGEV VE +
Sbjct: 647 KGPFRVTP------ALTQKLLGAPRFLEDE-HEKELLPGVALGLAWTPYGGEVLNVEVSP 699
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL---VAEDGMNLLQGRDIHIHFPA 715
++GKG+L LTGQLGDV+KESAQ A+++ R+RA +L + AED RD+HIH PA
Sbjct: 700 LKGKGKLILTGQLGDVMKESAQAAVSYARSRAEELDIDPGFAED-------RDLHIHVPA 752
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAGVTLVTAL+S + + VR+D MTGE+TLRG VLPVGG+K+KILA G
Sbjct: 753 GATPKDGPSAGVTLVTALISALTGRPVRSDLCMTGEITLRGRVLPVGGIKEKILAGVARG 812
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K V++P +N KDL +VPA +L +E+ LA ++DVL AF+
Sbjct: 813 LKHVVIPAQNAKDLEDVPADLLRRIEVHLASHIDDVLPVAFK 854
>gi|75516372|gb|AAI03719.1| Lonp2 protein [Rattus norvegicus]
Length = 556
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 307/556 (55%), Positives = 407/556 (73%), Gaps = 18/556 (3%)
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LKKM P Y +R YLEL+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++E
Sbjct: 1 LKKMPQSMPEYALTRNYLELMVELPWNKSTTD-RLDIRAARILLDNDHYAMEKLKRRVLE 59
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRR
Sbjct: 60 YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR 119
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHY
Sbjct: 120 TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY 179
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
LNV FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHG
Sbjct: 180 LNVAFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG 239
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE + ++A DV
Sbjct: 240 LTPQQIQIPQLTTLAIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKEAKLDRSDV- 298
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMG--ESTHEVSN-TFRITSPLVVDEAMLEKVLGPPRF 624
ADG + V+ ES + ++ P+++D L+ +LGPP +
Sbjct: 299 -----------ADGEGCKEHVLEDAKPESIGDAADLALPPEMPILIDSHALKDILGPPLY 347
Query: 625 DDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALT 684
+ E +ER++ PG+++GL WT GG++ FVEA+ M G+G+L LTGQLGDV+KESA +A++
Sbjct: 348 -ELEVSERLSQPGVAIGLAWTPLGGKIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAIS 406
Query: 685 WVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVR 743
W+R+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR
Sbjct: 407 WLRSNAKKYHLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVR 466
Query: 744 ADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEII 803
+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K +I+P+RN KDL E+P+ V L +
Sbjct: 467 SDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKHIIIPQRNEKDLEEIPSNVKQDLSFV 526
Query: 804 LAKRMEDVLEQAFEGG 819
A +++VL AF+GG
Sbjct: 527 TASCLDEVLNAAFDGG 542
>gi|303245833|ref|ZP_07332115.1| ATP-dependent protease La [Desulfovibrio fructosovorans JJ]
gi|302492616|gb|EFL52484.1| ATP-dependent protease La [Desulfovibrio fructosovorans JJ]
Length = 819
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 344/762 (45%), Positives = 475/762 (62%), Gaps = 77/762 (10%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFI 116
+ R ++ P GR+ V+++GL R V E + Y+ A++ L + +EQ+
Sbjct: 111 IMRMLKMPDGRLK--VLVQGLTRAKVTEFVSSDPYHLAKVEVLGERDTKEVTLEQEAMMR 168
Query: 117 ALSRQFKAT-------AMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEE 169
A Q + A ++++VL + G +LAD+ ++ + EE
Sbjct: 169 AAREQSEKILSLRGMPAADIMAVLNSVNEPG-------------RLADLVASNLRMRVEE 215
Query: 170 QLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKE 229
+L+ D RL E + + + + KI + + K+QK+F LR+QM+AI+
Sbjct: 216 AQRLLECEDPIERLRLVNEQLVKEAEVAAMQAKIQNMAKEGMDKAQKDFFLREQMKAIRR 275
Query: 230 ELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIA 289
ELG+ ++ D+L L+ + AGMP + K K+ +RL M P R YL+ +
Sbjct: 276 ELGEGGEESDELEELKGALDKAGMPKEVKKEADKQFKRLASMHPDSSESGVIRTYLDWLV 335
Query: 290 DLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPP 349
DLPW+K S++ LD+K AK LD DH+ L +VK+RI+EYL+VRKL P +GP+LCFVGPP
Sbjct: 336 DLPWKKMSKD-RLDIKEAKHILDEDHFDLEKVKERILEYLSVRKLNPAMKGPILCFVGPP 394
Query: 350 GVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNP 409
GVGKTSL SIA ALGRKF+R+SLGG++DEA+IRGHRRTYIGSMPGR+I +K+ G NP
Sbjct: 395 GVGKTSLGRSIARALGRKFVRMSLGGMRDEAEIRGHRRTYIGSMPGRVIQSIKQAGTRNP 454
Query: 410 VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPI 469
V++LDEIDK GSD RGDP+SALLEVLDPEQN TF DHYLNVPFDLSKV+F+ TAN I
Sbjct: 455 VIMLDEIDKVGSDFRGDPSSALLEVLDPEQNNTFQDHYLNVPFDLSKVMFICTANILDTI 514
Query: 470 PPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTR 529
P PLLDRME+I+LPGYT +EK++IA R+++PR + ++GL + I + +V VI+ YTR
Sbjct: 515 PGPLLDRMELIQLPGYTEQEKVKIARRYILPRQIKENGLEPGDMTISDKVVARVIRDYTR 574
Query: 530 EAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVI 589
EAG+RNLER + ++AR A K AE E
Sbjct: 575 EAGLRNLEREIGSVARKLARKKAEGE---------------------------------- 600
Query: 590 PMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGG 649
+ FR+T A L+K+LGP RF D E E PG++VGL WT GG
Sbjct: 601 ---------NPPFRVTV------ASLDKLLGPARFMDDE-REMELPPGVAVGLAWTPVGG 644
Query: 650 EVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDI 709
+ +EA + GKG L LTG+LGDV+KESAQ ALT+ ++RA DL + E + + DI
Sbjct: 645 AILHIEAATLPGKGALQLTGKLGDVMKESAQAALTYAKSRAKDLGIDPE----VFEKNDI 700
Query: 710 HIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKIL 769
HIH PAGA PKDGPSAGVTLVTAL+S+ + V D AMTGE+TLRG VLPVGG+K+K+L
Sbjct: 701 HIHVPAGATPKDGPSAGVTLVTALISVLTNTPVCNDVAMTGEITLRGRVLPVGGIKEKVL 760
Query: 770 AAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
AA G+KRVILP +N+KDL ++P + + ++++ +R+++V
Sbjct: 761 AAVAAGMKRVILPAQNMKDLRDIPRDLRSKIKVLPVERIDEV 802
>gi|253699261|ref|YP_003020450.1| ATP-dependent protease La [Geobacter sp. M21]
gi|251774111|gb|ACT16692.1| ATP-dependent protease La [Geobacter sp. M21]
Length = 817
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 338/775 (43%), Positives = 484/775 (62%), Gaps = 83/775 (10%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARIS-----SLEMTKIEMEQV-- 109
+ R ++ P GRV +V +GL + + E +Y+ RI +L+ +E E +
Sbjct: 82 IMRMLKLPDGRVKILV--QGLTKARITEYLAEKPFYSVRIDRIVEPALQENTLEAEALIR 139
Query: 110 ---EQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEIS 166
E+ +AL KA + E++ ++E Q+ G LAD+ ++ +
Sbjct: 140 TVKEELGKIVALG---KAVSPEVMVIVENMQEPGS-------------LADLVASNIGLK 183
Query: 167 FEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRA 226
EE +L+ +D RL + +L+++ + + + +I + ++ KSQ+E+ LR+Q+RA
Sbjct: 184 VEEAQGLLEVIDPLERLKRVNDLLNKESELLNMQARIQSAAKEEMGKSQREYYLREQLRA 243
Query: 227 IKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLE 286
I++ELG+ D +++ L + ++SA MP + K K+L RL++M P R +L+
Sbjct: 244 IQQELGETDARSEEIAELRKSIESAKMPQPVEKEALKQLGRLEQMHPDAAEAGMLRTFLD 303
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
+ D+PW K++++ L++ A E L+ DHY L +VK+RI+E+LAVRKLK +GP+LCFV
Sbjct: 304 WMVDIPWGKSTKD-SLEINRASEILNEDHYFLEKVKERILEFLAVRKLKKKMKGPILCFV 362
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTSL SIA A+GRKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I GLK+ G
Sbjct: 363 GPPGVGKTSLGKSIARAMGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGLKQAGS 422
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NPV +LDE+DK GSD RGDP+SALLEVLDPEQN +F+DHY+N+PF+LS V+F+ATAN+
Sbjct: 423 NNPVFMLDELDKLGSDFRGDPSSALLEVLDPEQNNSFSDHYINLPFNLSNVMFIATANQM 482
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
IP PL DRMEVI L GYT EEKL IA R+L+PR + ++G+ E + + ++ VI +
Sbjct: 483 DTIPGPLRDRMEVINLSGYTEEEKLGIAKRYLVPRQVKENGITEEIVTFSDEALRTVISK 542
Query: 527 YTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEM 586
YTREAG+RNLER + ++ R A KVAE
Sbjct: 543 YTREAGLRNLEREVGSICRKVARKVAE--------------------------------- 569
Query: 587 EVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTN 646
G+ H F I++ V K LGPP+F E E+ G+ GL WT
Sbjct: 570 -----GKGEH-----FAISAGTVA------KYLGPPKFLREEEMEKNEV-GVVTGLAWTP 612
Query: 647 FGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQG 706
GGEV FVEAT M+GKG L LTGQLGDV+KES Q AL+++R++ D + ++ N
Sbjct: 613 VGGEVLFVEATVMKGKGALTLTGQLGDVMKESVQAALSYIRSKTADFDI--QEDFN--SA 668
Query: 707 RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKD 766
DIH+H PAGA+PKDGPSAGVT+ TALVS ++ VR + AMTGE+TLRG VLP+GG+K+
Sbjct: 669 TDIHVHVPAGAIPKDGPSAGVTMATALVSALTKVPVRKEVAMTGEITLRGKVLPIGGLKE 728
Query: 767 KILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
KILAA R G+ V++P +N KDL +VP +L L+I+ A +++VL A E P
Sbjct: 729 KILAAARLGVTTVVIPVQNQKDLEDVPKTILKKLKIVPASNIDEVLAVALETYPP 783
>gi|30249257|ref|NP_841327.1| ATP-dependent proteinase La [Nitrosomonas europaea ATCC 19718]
gi|30180576|emb|CAD85189.1| lonA; ATP-dependent proteinase La 1 (lon) (class III heat-shock
protein) [Nitrosomonas europaea ATCC 19718]
Length = 788
Score = 620 bits (1600), Expect = e-175, Method: Compositional matrix adjust.
Identities = 325/748 (43%), Positives = 475/748 (63%), Gaps = 63/748 (8%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T+ V G+ RF ++ L + ARI + + QVE AL+ Q + AME
Sbjct: 95 THHAVCLGVERFRIEALVEGYPFLAARIRRIPEAIPDTTQVE------ALTLQLRERAME 148
Query: 129 LISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATE 188
++S+L L T LADI + + E+ +L+++D++ RL +
Sbjct: 149 IVSLL--PSVPAELAHALQATRAPSDLADITASLLDTEVAEKQKLLETIDIEERLHSVLQ 206
Query: 189 LVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKM 248
++ R ++ +R++++I ++ + Q+ +++FLLR+Q+R I++ELG++ ++E ++V LE +
Sbjct: 207 ILARRIEVLRLSQEIGERTKEQMEDRERKFLLREQLRTIQKELGEDGENEQEVVKLEEAI 266
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAK 308
+AGMP++I + KEL+RL++M ++ YLE + +LPW+ E+ +DL AA+
Sbjct: 267 TAAGMPTDIEQQTHKELQRLQRMPAASSEFSMLHTYLEWMTELPWQ-LPEDKPIDLDAAR 325
Query: 309 ERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF 368
L++DH+GL R+KQRIIE+LAV+KLKP R P+LCF GPPGVGKTSL SIA AL R F
Sbjct: 326 TILEADHFGLERIKQRIIEFLAVQKLKPQGRAPILCFAGPPGVGKTSLGQSIARALQRPF 385
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
+R+SLGGV DEA++RGHRRTY+G+MPG +I GL++ G N VM+LDEIDK + GDPA
Sbjct: 386 VRVSLGGVHDEAEMRGHRRTYVGAMPGNIIQGLRKAGARNCVMMLDEIDKMTASAHGDPA 445
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
+ALLE+LDPEQN TF D+YL VPFDLS+V+F+ATAN IPPP+ DRME+I+LPGYT E
Sbjct: 446 AALLEILDPEQNSTFRDNYLGVPFDLSRVVFIATANVIDQIPPPVRDRMEIIDLPGYTQE 505
Query: 489 EKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA 548
EKL+IA+R+L+ R + +GL ++ + A ++ +I YTREAGVR ER + + R AA
Sbjct: 506 EKLQIALRYLVQRQSEANGLQTDQCMLTSAALQGIIANYTREAGVRQFEREIGRIMRHAA 565
Query: 549 VKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPL 608
+++A+ Q+Q +
Sbjct: 566 LQIAQGTQQQ-------------------------------------------------V 576
Query: 609 VVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLT 668
+D LE +LGP ++ + E A PG++ GL WT GG++ F+EAT + G G L LT
Sbjct: 577 QIDAQNLEDILGPEKY-EHELALHTDLPGVATGLAWTPVGGDILFIEATRINGSGRLILT 635
Query: 669 GQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVT 728
GQLGDV+KESAQ ALT V+ARA DL + ++ +G D+H+H PAGA+PKDGPSAGV
Sbjct: 636 GQLGDVMKESAQAALTLVKARAEDLHI----PTSVFEGIDVHLHVPAGAIPKDGPSAGVA 691
Query: 729 LVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKD 788
+ AL SLF+ + VR D AMTGE++LRGLVLPVGG+K+KILAA R GI+ V+LP RN KD
Sbjct: 692 MFIALASLFANRPVRHDVAMTGEISLRGLVLPVGGIKEKILAAQRAGIRTVLLPARNRKD 751
Query: 789 LVEVPAAVLASLEIILAKRMEDVLEQAF 816
L +VP A +++ + + ++ ++ A
Sbjct: 752 LHDVPEATRTAIQFVFLETADNAVQAAL 779
>gi|91203232|emb|CAJ72871.1| strongly similar to ATP-dependent protease La [Candidatus Kuenenia
stuttgartiensis]
Length = 805
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 331/752 (44%), Positives = 467/752 (62%), Gaps = 63/752 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
++++GL R + E Y+ A+IS++E + +E D + AL+R +IS
Sbjct: 116 MLVQGLRRVKIGEYVQSDPYFKAKISAIE------DIIEDDRETEALARNAADQFAHMIS 169
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
++ + V +E +LAD+ + +S E+ +L+ ++K+RL K T L+
Sbjct: 170 MMPSLPEELKIAVVNIENP--SRLADLITSHLNVSVAEKQKVLELANVKLRLQKVTTLIA 227
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
L+ + +A KI +V ++ K QKE+ LRQQ++AI++ELG+ D+ ++ L+ K+++A
Sbjct: 228 SELEVLEMATKIQSQVRNEMEKGQKEYYLRQQLKAIQDELGEGDERSMEIKELKEKIENA 287
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
MP+ K ++EL RL KM YT SR YL+L+ LPW ++++ LD+K A L
Sbjct: 288 KMPAEAKKEAERELERLAKMHSASAEYTVSRTYLDLLIALPWSVSTKD-QLDIKTASTIL 346
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHY L ++K+RI+EYLAVRKLK D +GP+LCFVGPPG GKTS+ SIA ++GRKF+R+
Sbjct: 347 DEDHYDLEKLKERILEYLAVRKLKDDMKGPILCFVGPPGTGKTSVGMSIARSMGRKFVRM 406
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGV+DEA+IRGHRRTYIG++PGR+I GLK+ NPV +LDEIDK G+D RGDP++AL
Sbjct: 407 SLGGVRDEAEIRGHRRTYIGALPGRIIQGLKKAESNNPVFMLDEIDKLGADFRGDPSAAL 466
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQN F+DHYL+V FDLS V+F+ TAN +PP L DRMEV+EL GYT EEK+
Sbjct: 467 LEVLDPEQNHAFSDHYLDVAFDLSNVMFITTANILDTVPPALKDRMEVLELSGYTAEEKI 526
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
I + ++P+ L HGL E L I + +K+VI YTREAG+RNLER +A L R A K+
Sbjct: 527 SIVKKFILPKQLKAHGLKEEQLTITDDAIKMVITDYTREAGLRNLEREIAHLCRKTAKKI 586
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
A GE T N ++ +
Sbjct: 587 AS--------------------------------------GEETSVTINAEQLNT----- 603
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
+LGP +F EAAER G++ GL WT GG++ F+EAT M G G+L LTG L
Sbjct: 604 ------LLGPIKFFS-EAAERTTDAGVATGLAWTQAGGDILFIEATFMPGTGKLTLTGCL 656
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GD++KESAQ A++++R++ L++ +D D HIH PAGA+PKDGPSAGVT+
Sbjct: 657 GDIMKESAQAAMSYIRSKLESLKISFKD----FDKYDFHIHVPAGAIPKDGPSAGVTMAM 712
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
AL+SL + ++ AMTGE+TLRG VLPVGG+K+K+LAA R GI V+LP+RN KDL E
Sbjct: 713 ALISLLKGTPILSNVAMTGEITLRGRVLPVGGIKEKVLAAKRAGITTVVLPKRNEKDLTE 772
Query: 792 VPAAVLASLEIILAKRMEDVLEQAFEGGCPWR 823
VP L +R++++L F P +
Sbjct: 773 VPENAKKRLNFAFVERVDEMLPIVFGAEEPKK 804
>gi|409913634|ref|YP_006892099.1| ATP-dependent Lon protease (La) [Geobacter sulfurreducens KN400]
gi|298507219|gb|ADI85942.1| ATP-dependent Lon protease (La) [Geobacter sulfurreducens KN400]
Length = 819
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 339/771 (43%), Positives = 481/771 (62%), Gaps = 83/771 (10%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI----------SSLEMTKIEM 106
+ R ++ P GRV +V +GL + + YY+ I SLE+ +
Sbjct: 83 IMRMLKLPDGRVKILV--QGLAKGRITSFVESKPYYSVAIERVVEPTPPEDSLEVEALMR 140
Query: 107 EQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEIS 166
EQ ++L K + E++ ++E Q+ G LAD+ ++ +
Sbjct: 141 AVKEQLTKIVSLG---KPVSPEVLVIVENMQEPGS-------------LADLVASNIGLK 184
Query: 167 FEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRA 226
EE +L+ +D RL + EL+ + + + + KI + ++ KSQ+E+ LR+Q+RA
Sbjct: 185 VEEAQKLLEIIDPVERLQRVNELLSKEHELLDMQAKIQTAAKEEMGKSQREYFLREQLRA 244
Query: 227 IKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLE 286
I++ELG+ D ++++ L + ++ A MP + K K+L RL++M P+ R YL+
Sbjct: 245 IQQELGETDAKSEEIMELRKAIEQAKMPPPVEKEALKQLGRLEQMHPEAAEAGMLRTYLD 304
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
+ +LPW ++ +I LD+K A+ LD DHY L ++K+RI+E+LAVRKL+ +GP+LCFV
Sbjct: 305 WMVELPWSTSTRDI-LDIKRARNILDEDHYYLDKIKERILEFLAVRKLRKKMKGPILCFV 363
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTSL SIA ALGRKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I GLK+ G
Sbjct: 364 GPPGVGKTSLGKSIARALGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGLKQAGS 423
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NPV +LDE+DK G+D RGDP+SALLEVLDPEQN F+DHY+N+PF+LS V+F+ATAN+
Sbjct: 424 NNPVFMLDELDKLGADFRGDPSSALLEVLDPEQNHMFSDHYINLPFNLSNVMFIATANQY 483
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
IP PLLDRME+I L GYT EEKL IA R+LIPR ++G+ + + + ++ +I +
Sbjct: 484 DTIPGPLLDRMEMINLSGYTEEEKLEIAKRYLIPRQTKENGITGKHISFTDDALRTIIAK 543
Query: 527 YTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEM 586
YTREAG+RNLER + ++ R A K+AE E++
Sbjct: 544 YTREAGLRNLEREIGSVCRKVARKIAEGEKK----------------------------- 574
Query: 587 EVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTN 646
+RIT A + K LGP ++ RE G+ GL WT
Sbjct: 575 --------------LYRITP------ATVAKYLGPAKY-LREVEMEHNDVGVVTGLAWTP 613
Query: 647 FGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQG 706
GGEV FVEAT M+GKG L LTG LGDV+KES Q AL+++R++A +L L ED L G
Sbjct: 614 VGGEVLFVEATIMKGKGGLTLTGHLGDVMKESVQAALSYIRSKAQELHL-PED---FLAG 669
Query: 707 RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKD 766
DIH+H PAGA+PKDGPSAG+T+ TALVS +R VR D AMTGE+TLRG VLP+GG+K+
Sbjct: 670 VDIHVHVPAGAIPKDGPSAGITMATALVSALTRVPVRKDVAMTGEITLRGKVLPIGGLKE 729
Query: 767 KILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
K+LAA R GI +++PE+N+KDL EVP +L + ++ AK ++DVL+ A E
Sbjct: 730 KMLAAIRAGITTIVIPEQNVKDLDEVPKPILKKVTVVSAKVIDDVLKVALE 780
>gi|347360002|ref|YP_388936.2| anti-sigma H sporulation factor LonB [Desulfovibrio alaskensis G20]
gi|342906537|gb|ABB39241.2| anti-sigma H sporulation factor, LonB [Desulfovibrio alaskensis
G20]
Length = 804
Score = 620 bits (1599), Expect = e-174, Method: Compositional matrix adjust.
Identities = 342/760 (45%), Positives = 479/760 (63%), Gaps = 63/760 (8%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFI 116
+ R ++ P GR+ V+++G+ R V+ + Y A + ++E + VEQ+
Sbjct: 103 IMRMLKMPDGRLK--VLVQGISRAKVKNFVSEDPYLLAEVEAIEEPEAGPLTVEQE---- 156
Query: 117 ALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
A+ R + + +++S+ + T VL +LAD+ A+ + + +L+
Sbjct: 157 AMIRSAREQSEKILSL--RGVPTADIMAVLNGVDEPGRLADLIAANLRMKVADAQTILEC 214
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
D RL+ E + + ++ + KI + + K+QK++ LR+QM+AI+ ELG+ D
Sbjct: 215 TDPDERLTLVNEQLVKEVEVAAMQAKIQSMAKEGMDKAQKDYFLREQMKAIRRELGEGPD 274
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
++D+ L + AG+P ++ K K+LRRL M P+ T R YLE +A+LPW+K
Sbjct: 275 GDEDMDELIESLAKAGLPKDVRKEADKQLRRLSVMHPESSEATVVRTYLEWLAELPWKKL 334
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
S + +D+ A+ LD DHYGL +VK RI+EYL+VRKL P ++GP+LCF GPPGVGKTSL
Sbjct: 335 SRD-RIDIPRAQAILDEDHYGLEKVKDRILEYLSVRKLNPKSKGPILCFSGPPGVGKTSL 393
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
SIA ALGRKF RISLGG++DEA+IRGHRRTYIG+MPGR+I +K++G NPV++LDEI
Sbjct: 394 GRSIARALGRKFQRISLGGMRDEAEIRGHRRTYIGAMPGRIIQTIKQLGTRNPVIMLDEI 453
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK GSD RGDP+SALLEVLDPEQN +F+DHYLNVPFDLSKV+F+ TAN+ + IP PL DR
Sbjct: 454 DKLGSDFRGDPSSALLEVLDPEQNFSFSDHYLNVPFDLSKVMFICTANQLETIPAPLRDR 513
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
ME+I +PGYT +EK +IA R+L+PR ++GL + +QI + ++ +I YTREAG+RNL
Sbjct: 514 MEIIRIPGYTMQEKAKIARRYLLPRQAGENGLNEDDVQIADNVITKIIDEYTREAGLRNL 573
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER L + R A + AE E DG
Sbjct: 574 ERELGTVCRKLARRKAEGE------------------------DGP-------------- 595
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
FR+T +LEK+LG PRF D E ER PG+++GL WT +GGEV VE
Sbjct: 596 -----FRVTV------KVLEKLLGAPRFID-EQKERELLPGVALGLAWTPYGGEVLNVEV 643
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ M+GKG+L LTGQLGDV+KESAQ A+++VR+ A +L + E NL DIHIH PAG
Sbjct: 644 STMKGKGKLTLTGQLGDVMKESAQAAVSYVRSHAAELDVDPEFSSNL----DIHIHVPAG 699
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAGVTL+TAL+S + + V +D MTGE+TLRG VLPVGG+K+KILAA G+
Sbjct: 700 ATPKDGPSAGVTLLTALISALTGRSVNSDLCMTGEITLRGRVLPVGGIKEKILAAVARGL 759
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+P +N KDL ++PA +L + + A+ + D+L A
Sbjct: 760 SHAFIPHQNKKDLEDIPADLLRKINVHPAEHINDILPLAL 799
>gi|39998283|ref|NP_954234.1| ATP-dependent Lon protease (La) [Geobacter sulfurreducens PCA]
gi|39985229|gb|AAR36584.1| ATP-dependent Lon protease (La) [Geobacter sulfurreducens PCA]
Length = 819
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 339/771 (43%), Positives = 481/771 (62%), Gaps = 83/771 (10%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI----------SSLEMTKIEM 106
+ R ++ P GRV +V +GL + + YY+ I SLE+ +
Sbjct: 83 IMRMLKLPDGRVKILV--QGLAKGRITSFVESKPYYSVAIERVVEPTPPEDSLEVEALMR 140
Query: 107 EQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEIS 166
EQ ++L K + E++ ++E Q+ G LAD+ ++ +
Sbjct: 141 AVKEQLTKIVSLG---KPVSPEVLVIVENMQEPGS-------------LADLVASNIGLK 184
Query: 167 FEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRA 226
EE +L+ +D RL + EL+ + + + + KI + ++ KSQ+E+ LR+Q+RA
Sbjct: 185 VEEAQKLLEIIDPVERLQRVNELLSKEHELLDMQAKIQTAAKEEMGKSQREYFLREQLRA 244
Query: 227 IKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLE 286
I++ELG+ D ++++ L + ++ A MP + K K+L RL++M P+ R YL+
Sbjct: 245 IQQELGETDARSEEIMELRKAIEQAKMPPPVEKEALKQLGRLEQMHPEAAEAGMLRTYLD 304
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
+ +LPW ++ +I LD+K A+ LD DHY L ++K+RI+E+LAVRKL+ +GP+LCFV
Sbjct: 305 WMVELPWSTSTRDI-LDIKRARNILDEDHYYLDKIKERILEFLAVRKLRKKMKGPILCFV 363
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTSL SIA ALGRKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I GLK+ G
Sbjct: 364 GPPGVGKTSLGKSIARALGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGLKQAGS 423
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NPV +LDE+DK G+D RGDP+SALLEVLDPEQN F+DHY+N+PF+LS V+F+ATAN+
Sbjct: 424 NNPVFMLDELDKLGADFRGDPSSALLEVLDPEQNHMFSDHYINLPFNLSNVMFIATANQY 483
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
IP PLLDRME+I L GYT EEKL IA R+LIPR ++G+ + + + ++ +I +
Sbjct: 484 DTIPGPLLDRMEMINLSGYTEEEKLEIAKRYLIPRQTKENGITGKHISFTDDALRTIIAK 543
Query: 527 YTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEM 586
YTREAG+RNLER + ++ R A K+AE E++
Sbjct: 544 YTREAGLRNLEREIGSVCRKVARKIAEGEKK----------------------------- 574
Query: 587 EVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTN 646
+RIT A + K LGP ++ RE G+ GL WT
Sbjct: 575 --------------LYRITP------ATVAKYLGPAKY-LREVEMEHNDVGVVTGLAWTP 613
Query: 647 FGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQG 706
GGEV FVEAT M+GKG L LTG LGDV+KES Q AL+++R++A +L L ED L G
Sbjct: 614 VGGEVLFVEATIMKGKGGLTLTGHLGDVMKESVQAALSYIRSKAQELHL-PED---FLAG 669
Query: 707 RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKD 766
DIH+H PAGA+PKDGPSAG+T+ TALVS +R VR D AMTGE+TLRG VLP+GG+K+
Sbjct: 670 VDIHVHVPAGAIPKDGPSAGITMATALVSALTRVPVRKDVAMTGEITLRGKVLPIGGLKE 729
Query: 767 KILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
K+LAA R GI +++PE+N+KDL EVP +L + ++ AK ++DVL+ A E
Sbjct: 730 KMLAAIRAGITTIVIPEQNVKDLDEVPKPILKKVTVVSAKVIDDVLKVALE 780
>gi|94264385|ref|ZP_01288176.1| Peptidase S16, ATP-dependent protease La [delta proteobacterium
MLMS-1]
gi|93455214|gb|EAT05430.1| Peptidase S16, ATP-dependent protease La [delta proteobacterium
MLMS-1]
Length = 802
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 322/663 (48%), Positives = 432/663 (65%), Gaps = 54/663 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ V++ ++ E +L+ +D RL + +L+ + L+ V +I + + ++ +
Sbjct: 179 RLADLVVSNLQLKVPESQAVLEILDPVERLRRVADLLQKELEVSTVQARIQSEAKEEMGR 238
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ LR+Q++A+K+ELGD D+ +L L K + A MP+ K K+L+RL+ M P
Sbjct: 239 SQREYYLREQLQALKKELGDVDERSQELDELRDKFKKARMPAEAKKEGLKQLKRLEMMHP 298
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
+ R YL+ + ++PW KAS+ LDLK A+E LD+DHYGL +VK+RI+EYLAVRK
Sbjct: 299 DASEASIIRTYLDWLLEVPWRKASKA-RLDLKVAREVLDTDHYGLEKVKERILEYLAVRK 357
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LCFVGPPGVGKTSL SIA ALGRKF RISLGG++DEA+IRGHRRTYIG+M
Sbjct: 358 LNKTTKGPILCFVGPPGVGKTSLGQSIARALGRKFHRISLGGMRDEAEIRGHRRTYIGAM 417
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I GLK VG NPV ++DEIDK GSD RGDP+SALLEVLDP QN +F+DHYLN+P D
Sbjct: 418 PGRIIQGLKTVGTNNPVFMMDEIDKVGSDYRGDPSSALLEVLDPAQNTSFSDHYLNLPCD 477
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+F+ TAN IP LLDRMEVI L GYT EEK IA R+L+PR + ++GL +
Sbjct: 478 LSNVMFITTANLTDTIPAALLDRMEVIRLAGYTLEEKTEIAKRYLVPRQVKENGLKEAQI 537
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
E + +I YTREAG+RNLER + AL R A K+AE +
Sbjct: 538 DFAEDAIVRLITHYTREAGLRNLEREIGALCRKVARKIAEGGK----------------- 580
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
++IT+ L K LGPP+ +ER+
Sbjct: 581 --------------------------GPYKITT------RTLAKYLGPPKHLPEAESERI 608
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
PG++ GL WT FGGEV +VE + M+G G+L LTGQLGDV+KESAQ AL++ RAR +L
Sbjct: 609 DQPGMATGLAWTEFGGEVLYVEVSIMKGTGKLTLTGQLGDVMKESAQAALSFCRARLQEL 668
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
QL + + DIH+H PAGA+PKDGPSAGVT+ TAL S S + VR D AMTGE+T
Sbjct: 669 QLTE----DYFEKNDIHVHVPAGAIPKDGPSAGVTMATALYSALSSQVVRPDVAMTGEIT 724
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K LAA R G+ V++P++N KDL E+P + A L + A+ M+D+L+
Sbjct: 725 LRGRVLPIGGLKEKALAALRAGLDTVVIPQQNSKDLEEIPKDLRAKLNFVAARNMDDILK 784
Query: 814 QAF 816
F
Sbjct: 785 MVF 787
>gi|374855747|dbj|BAL58602.1| ATP-dependent protease La [uncultured candidate division OP1
bacterium]
Length = 790
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 350/760 (46%), Positives = 488/760 (64%), Gaps = 66/760 (8%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFI 116
++R ++ P+ ++ ++GL RF+V+ + Y A+I LE VE+D +
Sbjct: 90 IARVIKTPNN--ALLLWVQGLSRFAVEVFTQETPYLVAQIEPLESV------VEEDIETE 141
Query: 117 ALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
ALS+Q A +++S++ L P H LAD A+ +I E + +L++
Sbjct: 142 ALSKQVAALFQKMLSLMPNPHMEIHAMASSLSD-PGH-LADFITANLDIEVEAKQQVLET 199
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+++K RL+ L++ + + V +I +V+ ++ +S +E +LR+QM AIK+EL ++
Sbjct: 200 LNVKERLTLVLRLLEEENEILEVGSRIHTRVQEEIGRSTRERILREQMEAIKKEL--GEE 257
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+ ++ L RK++ A MP ++ K +EL RL +M P YT SR YL+ + LPW K
Sbjct: 258 EGPEIEELRRKIKHAKMPKDVEKEALRELERLAQMHPSSAEYTVSRTYLDWLIALPWSKT 317
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
++++ LD+ A++ LD DHY L +VK+RI+EYLAV KLK D +GP+LC VGPPGVGKTSL
Sbjct: 318 TKDM-LDIARARQILDEDHYNLTKVKERILEYLAVLKLKRDMKGPILCLVGPPGVGKTSL 376
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
SIA ALGRKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I GL+R NPV +LDEI
Sbjct: 377 GRSIARALGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGLRRANSKNPVFMLDEI 436
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK SD RGDPA+ALLEVLDPEQN F DHYL+VPFDLS+V+F+ TAN IP PLLDR
Sbjct: 437 DKMSSDFRGDPAAALLEVLDPEQNNNFTDHYLDVPFDLSRVLFITTANVLYTIPSPLLDR 496
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEV+ELPGY+ +EK++IA R+LIP+ + HGL + ++ +A ++ +I+ YT EAGVRNL
Sbjct: 497 MEVLELPGYSEDEKVQIAQRYLIPKQIKAHGLRANQVEFSDAALRQIIRDYTHEAGVRNL 556
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER + A+ R AV+VAE+ KD R R + A+V
Sbjct: 557 EREIGAVCRKIAVQVAEK---------KDRSR--------RFIEPADV------------ 587
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
K+LGPPR+ E AER+ G+++GLV T GG++ F+EA
Sbjct: 588 -------------------SKMLGPPRYFS-EVAERLTKSGVAIGLVVTQVGGDIVFIEA 627
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
T M+GKGEL LTGQLG+V++ESAQ AL+++RA A + + DIHIH P G
Sbjct: 628 TKMKGKGELKLTGQLGEVMRESAQAALSYIRANAEQFGI----DPDFFAHHDIHIHVPEG 683
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A+PKDGPSAGVT+VTAL SL + V+AD AMTGE+TLRG VLPVGG+++K+LAAHR GI
Sbjct: 684 AIPKDGPSAGVTIVTALASLLTDTPVQADLAMTGEITLRGKVLPVGGIREKVLAAHRAGI 743
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K VILP+RN KDL E+P V +L + + VLE A
Sbjct: 744 KTVILPKRNEKDLEELPQNVKDALRFEFVEEISQVLEIAL 783
>gi|197117001|ref|YP_002137428.1| ATP-dependent Lon protease [Geobacter bemidjiensis Bem]
gi|197086361|gb|ACH37632.1| ATP-dependent Lon protease (La) [Geobacter bemidjiensis Bem]
Length = 816
Score = 617 bits (1590), Expect = e-173, Method: Compositional matrix adjust.
Identities = 341/781 (43%), Positives = 486/781 (62%), Gaps = 84/781 (10%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARIS-----SLEMTKIEMEQV-- 109
+ R ++ P GRV +V +GL + + E +Y+ RI +L+ +E E +
Sbjct: 82 IMRMLKLPDGRVKILV--QGLTKARITEYLAEKPFYSVRIDRIVEPALQENTLEAEALIR 139
Query: 110 ---EQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEIS 166
E+ +AL KA + E++ ++E Q+ G LAD+ ++ +
Sbjct: 140 TVKEELGKIVALG---KAVSPEVMVIVENMQEPGS-------------LADLVASNIGLK 183
Query: 167 FEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRA 226
EE +L+ +D RL + +L+++ + + + +I + ++ KSQ+E+ LR+Q+RA
Sbjct: 184 VEEAQGLLEVIDPLERLKRVNDLLNKESELLNMQARIQSAAKEEMGKSQREYYLREQLRA 243
Query: 227 IKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLE 286
I++ELG+ D +++ L + ++SA MP + K K+L RL++M P R +L+
Sbjct: 244 IQQELGETDARSEEIAELRKSIESAKMPQPVEKEALKQLGRLEQMHPDAAEAGMLRTFLD 303
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
+ D+PW K++++ L++ A E L+ DHY L +VK+RI+E+LAVRKLK +GP+LCFV
Sbjct: 304 WMVDIPWGKSTKD-SLEINRASEILNEDHYFLEKVKERILEFLAVRKLKKKMKGPILCFV 362
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTSL SIA A+GRKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I GLK+ G
Sbjct: 363 GPPGVGKTSLGKSIARAMGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGLKQAGS 422
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NPV +LDE+DK GSD RGDP+SALLEVLDPEQN +F+DHY+N+PF+LS V+F+ATAN+
Sbjct: 423 NNPVFMLDELDKLGSDFRGDPSSALLEVLDPEQNNSFSDHYINLPFNLSNVMFIATANQM 482
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
IP PL DRMEVI L GYT EEKL IA R+L+PR + ++G+ + + + ++ VI +
Sbjct: 483 DTIPGPLRDRMEVINLSGYTEEEKLGIAKRYLVPRQVKENGITDDIVAFSDEALRTVISK 542
Query: 527 YTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEM 586
YTREAG+RNLER + ++ R A KVAE
Sbjct: 543 YTREAGLRNLEREVGSICRKVARKVAE--------------------------------- 569
Query: 587 EVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTN 646
G+ H F I++ V K LGPP+F E E+ G+ GL WT
Sbjct: 570 -----GKGEH-----FAISAGTVA------KYLGPPKFLREEEMEKNEV-GVVTGLAWTP 612
Query: 647 FGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQG 706
GGEV FVEAT M+GKG L LTGQLGDV+KES Q AL+++R++ D + ED
Sbjct: 613 VGGEVLFVEATVMKGKGALTLTGQLGDVMKESVQAALSYIRSKTADFD-IPED---FNST 668
Query: 707 RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKD 766
DIH+H PAGA+PKDGPSAGVT+ TALVS ++ VR + AMTGE+TLRG VLP+GG+K+
Sbjct: 669 TDIHVHVPAGAIPKDGPSAGVTMATALVSALTKIPVRKEVAMTGEITLRGKVLPIGGLKE 728
Query: 767 KILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHS 826
KILAA R G+ V++P +N KDL +VP +L L+I+ A +++VL A E P R S
Sbjct: 729 KILAAARLGVTTVVIPVQNQKDLEDVPKTILKKLKIVPASNIDEVLAVALE-IYPPRAAS 787
Query: 827 K 827
K
Sbjct: 788 K 788
>gi|291280083|ref|YP_003496918.1| ATP-dependent Lon protease [Deferribacter desulfuricans SSM1]
gi|290754785|dbj|BAI81162.1| ATP-dependent Lon protease [Deferribacter desulfuricans SSM1]
Length = 777
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 336/770 (43%), Positives = 484/770 (62%), Gaps = 86/770 (11%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GRV ++++GL R ++ Y+ ++S ++ Q+E+D + AL
Sbjct: 82 RMLKLPDGRVK--ILVQGLKRGKIEGYIQNEPYFKVKVSPIDEV-----QIEKDLNVEAL 134
Query: 119 SRQFK-----ATAM------ELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISF 167
R K A + +L+++++ G KLADI VA+ +
Sbjct: 135 IRYVKEQIGKAVNLGKPMLPDLLAIIDTLDDPG-------------KLADIVVANIGLKI 181
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
EE +L+ V+ RL K ++ ++R + + V +KI + +G++ KSQ+E+ L++Q++AI
Sbjct: 182 EEAQEVLEIVNPVERLKKVSDFLNREIAILEVQQKILNEAKGEIDKSQREYFLKEQLKAI 241
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
K+ELG+ DD + ++ E+K++ A MP N+ + +K+L RL KM P T R YLE
Sbjct: 242 KKELGEEDDFQKEIEEFEKKIKKAKMPKNVREEAKKQLDRLSKMHPDSAEATVIRTYLEW 301
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
+ +LPW K+S++ +LDL AK+ LD DHYGL VK+RI+E+LAVRKL P+ + P+LCFVG
Sbjct: 302 LVELPWSKSSKD-NLDLTHAKKILDEDHYGLKEVKERILEFLAVRKLNPNMKSPILCFVG 360
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL SIA A+GRKF RISLGG++DEA+IRGHRRTYIG+MPG++I G+K G
Sbjct: 361 PPGVGKTSLGKSIARAMGRKFHRISLGGMRDEAEIRGHRRTYIGAMPGKIIQGIKNCGTN 420
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDEIDK G D RGDP+SALLEVLDPEQN +F DHYL VPFDLSKV+F+ TAN
Sbjct: 421 NPVFMLDEIDKIGMDFRGDPSSALLEVLDPEQNNSFVDHYLGVPFDLSKVLFITTANYLD 480
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
PIPP L DRME+I +PGYT E+K++IA ++LIPR + ++GL ++ + ++ +I Y
Sbjct: 481 PIPPALKDRMEIIYIPGYTEEDKVKIAEKYLIPRQIKENGLKESQIRFTKRAIEKIITGY 540
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TRE+G+RNLER + + R AA + AE+ +++ L + V +
Sbjct: 541 TRESGLRNLERLIGKICRKAARQYAEKRKDKFLINENAVEKY------------------ 582
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
LGP R+ D + + GI GL WT F
Sbjct: 583 -------------------------------LGPVRYLDEDELKNNEI-GIVTGLAWTPF 610
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGR 707
GGE+ FVE T +GKG L LTGQLGDV+KESA+ ALT +RA A + +L +
Sbjct: 611 GGEILFVECTKYKGKGNLILTGQLGDVMKESARAALTHIRAIAPKYGI----DESLFKQY 666
Query: 708 DIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDK 767
DIH+H PAGA+PKDGPSAG+T+ TA+ S+F V+ D AMTGE+T+ G VLP+GG+K+K
Sbjct: 667 DIHVHVPAGAIPKDGPSAGITIATAIYSVFKHVPVKKDVAMTGEITITGKVLPIGGLKEK 726
Query: 768 ILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+LAA R+ IK+V+LP++N KDL+E+P + SL++I ++ EDV+ A +
Sbjct: 727 LLAAKRHNIKKVLLPKKNEKDLIEIPKDIKKSLDLIFVEKFEDVVSHAID 776
>gi|386816191|ref|ZP_10103409.1| anti-sigma H sporulation factor, LonB [Thiothrix nivea DSM 5205]
gi|386420767|gb|EIJ34602.1| anti-sigma H sporulation factor, LonB [Thiothrix nivea DSM 5205]
Length = 802
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 335/764 (43%), Positives = 475/764 (62%), Gaps = 66/764 (8%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ R V P G + +V++G RF V + + Y ARI +L E + DPD
Sbjct: 93 NILRYVTTPGG--AHHLVVQGEERFRVLDYVSSQPYLVARIEALP------EADDSDPDI 144
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
A R + A+E + +L Q T + LAD+ +IS +E+ +L+
Sbjct: 145 QARMRHLQEKAIETVQLLPQAPPE--VTAAIQSMEGAGALADLVSNFLDISPQEKQKILE 202
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+ DL+ RL K + V + L+ +++ +I Q+ + + Q+EF+LR++++AI++ELG++D
Sbjct: 203 TTDLRERLDKVADHVRQQLEVLKLTREIDQQTKQSMDARQREFMLRERLKAIQKELGEDD 262
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
++ ++ L + + A MP + QKEL+RL+KM Y+ R YL+ + LPW K
Sbjct: 263 GNDAEIEELRQAIADADMPQEAAEQAQKELKRLQKMPDSSGEYSMIRTYLDWLTSLPWSK 322
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
E ++D+ A+ LD+DHYGL ++K+RI+EYLAVRKL P R P+LCFVGPPGVGKTS
Sbjct: 323 LDAE-NIDIAKARAVLDADHYGLDKIKKRILEYLAVRKLNPQGRSPILCFVGPPGVGKTS 381
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA ALG +F+R SLGGV DEA+IRGHRRTY+G++PG +I L++ G NPV +LDE
Sbjct: 382 LGQSIAHALGLQFVRASLGGVHDEAEIRGHRRTYMGALPGNIIQELRKAGTRNPVFMLDE 441
Query: 416 IDKT-GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
IDK G GDPASALLEVLDP QN TF D+YL +PFDLSKV+F+ATAN IP PL
Sbjct: 442 IDKLGGGGFHGDPASALLEVLDPAQNGTFRDNYLALPFDLSKVVFIATANVLDSIPGPLR 501
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRME+I LPGYT +EK+ IA R+L+ R + HGL +E + + E ++ ++ YTREAGVR
Sbjct: 502 DRMEIISLPGYTEDEKVEIAKRYLVKRQREDHGLSAEQVSMSEEALRSIVADYTREAGVR 561
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGES 594
NL+R + A+ R A ++VAE + A+ +++ E IP
Sbjct: 562 NLDREVGAVMRYATMQVAEGK-----------------------AETVDIDAEDIP---- 594
Query: 595 THEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFV 654
+LGP RF+ E A R + PG++ G+ WT GG++ F+
Sbjct: 595 ----------------------AILGPQRFES-EVAMRTSEPGVATGMAWTPVGGDILFI 631
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFP 714
E T M GKG L +TGQLGDV+KESAQ AL+ +++RA L + + + DIH+H P
Sbjct: 632 ETTKMPGKGRLSITGQLGDVMKESAQAALSLIKSRAKQLGI----SQQVFEENDIHLHVP 687
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
AGA+PKDGPSAGV++ TALVSL + ++VR+D AMTGE++LRGLVLP+GGVK+K LAA R
Sbjct: 688 AGAIPKDGPSAGVSIFTALVSLLTDQKVRSDVAMTGEISLRGLVLPIGGVKEKCLAALRA 747
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GI V+LP RN KD +VP L+++ +++EDVL A EG
Sbjct: 748 GIHTVLLPARNRKDWEDVPENARGQLQVVWLEKVEDVLAAALEG 791
>gi|268317253|ref|YP_003290972.1| ATP-dependent protease La [Rhodothermus marinus DSM 4252]
gi|262334787|gb|ACY48584.1| ATP-dependent protease La [Rhodothermus marinus DSM 4252]
Length = 840
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 343/778 (44%), Positives = 493/778 (63%), Gaps = 85/778 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G + +V++G RF ++E Y+ A++ L+ + +++
Sbjct: 105 GTVASILKL---IKMPDGSKS--IVIQGRRRFEIEEYIQTEPYFVAKVRPLDDSIEGVDE 159
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS---FEI 165
VE A R K A++++++ ++ + F+AS ++
Sbjct: 160 VE----LQARVRSIKELAVQIVNL---SPNLPSEAAYAIQNIESPSFLIYFIASNLPIDV 212
Query: 166 SFEEQLV----MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLR 221
+ ++QL+ +L+ DL + + + R LQ ++++++I +V+ + + Q+E+LLR
Sbjct: 213 AAKQQLLEARSILEQADLLM------QHLSRELQVLQLSQEIRSRVKSDVDRQQREYLLR 266
Query: 222 QQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS 281
QQ++AI+EELG+ D+ ++ L ++ + +P + K V KE+ RL +M P P Y +
Sbjct: 267 QQLKAIQEELGEADE-MAEIEELRKRAEEKPLPEHARKAVFKEIERLSRMNPASPDYAVT 325
Query: 282 RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGP 341
R Y++ I +LPW + SE+ LDL+ A+ LD DHYGL +VK+RI+EYLAV KLK D + P
Sbjct: 326 RNYIDWILELPWLEYSED-HLDLQEAQRILDEDHYGLEQVKKRILEYLAVLKLKGDMKAP 384
Query: 342 VLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 401
+LCFVGPPGVGKTSL SIA ALGRKF+R+SLGGV+DEA+IRGHRRTY+G++PGR+I G+
Sbjct: 385 ILCFVGPPGVGKTSLGKSIARALGRKFVRVSLGGVRDEAEIRGHRRTYVGALPGRIIQGI 444
Query: 402 KRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVA 461
K+ G NPV +LDEIDK G+D RGDPASALLEVLDPEQN F+DHYL + +DLS+V+F+A
Sbjct: 445 KKAGTSNPVFMLDEIDKLGADFRGDPASALLEVLDPEQNYAFSDHYLELEYDLSRVLFIA 504
Query: 462 TANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVK 521
TAN IP PL DRME+IE+ GYT +EKL+IA R+L+PR ++QHGL E I + ++
Sbjct: 505 TANYLDLIPAPLRDRMEIIEISGYTQDEKLQIAKRYLVPRQVEQHGLKPEQFSITDEALR 564
Query: 522 LVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADG 581
+I YTRE+GVR LER +A++ R A K+A
Sbjct: 565 EIIDGYTRESGVRQLERTIASVVRGVAKKIA----------------------------- 595
Query: 582 AEVEMEVIPMG--ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGIS 639
MG ES H VD L++ LG ++ E AER PG++
Sbjct: 596 ---------MGEIESAH-------------VDVGDLKEYLGARKYFS-EVAERTEEPGVA 632
Query: 640 VGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAED 699
GL WT GG++ F+EA+A RG G L LTGQLGDV+KESAQ+A +V+A A +L +
Sbjct: 633 TGLAWTPVGGDILFIEASAARGNGRLILTGQLGDVMKESAQLAYFYVKAHAEELGI---- 688
Query: 700 GMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVL 759
++ + D+H+H PAGAVPKDGPSAGV L+TAL SLF+++RVR AMTGE+TLRGLVL
Sbjct: 689 PLDAFRYWDVHVHVPAGAVPKDGPSAGVALLTALASLFTQRRVRHTVAMTGEITLRGLVL 748
Query: 760 PVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
PVGG+K+K+LAA R GI+ V+LPE+N KD+ E+ L LEI+ +R+ +VLE+A E
Sbjct: 749 PVGGIKEKVLAAKRAGIQTVLLPEKNQKDIEEIKPESLEGLEIVYVRRVHEVLERALE 806
>gi|345302952|ref|YP_004824854.1| anti-sigma H sporulation factor LonB [Rhodothermus marinus
SG0.5JP17-172]
gi|345112185|gb|AEN73017.1| anti-sigma H sporulation factor, LonB [Rhodothermus marinus
SG0.5JP17-172]
Length = 840
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 342/778 (43%), Positives = 493/778 (63%), Gaps = 85/778 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G + +V++G RF ++E Y+ A++ L+ + +++
Sbjct: 105 GTVASILKL---IKMPDGSKS--IVIQGRRRFEIEEYIQTEPYFVAKVRPLDDSIEGVDE 159
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS---FEI 165
VE A R K A++++++ ++ + F+AS ++
Sbjct: 160 VE----LQARVRSIKELAVQIVNL---SPNLPSEAAYAIQNIESPSFLIYFIASNLPIDV 212
Query: 166 SFEEQLV----MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLR 221
+ +++L+ +L+ DL + + + R LQ ++++++I +V+ + + Q+E+LLR
Sbjct: 213 AAKQELLEARSILEQADLLM------QHLSRELQVLQLSQEIRSRVKSDVDRQQREYLLR 266
Query: 222 QQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS 281
QQ++AI+EELG+ D+ ++ L ++ + +P + K V KE+ RL +M P P Y +
Sbjct: 267 QQLKAIQEELGEADE-MAEIEELRKRAEEKPLPEHARKAVLKEIERLSRMNPASPDYAVT 325
Query: 282 RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGP 341
R Y++ I +LPW + SE+ LDL+ A+ LD DHYGL +VK+RI+EYLAV KLK D + P
Sbjct: 326 RNYIDWILELPWLEYSED-HLDLQEAQRILDEDHYGLEQVKKRILEYLAVLKLKGDMKAP 384
Query: 342 VLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 401
+LCFVGPPGVGKTSL SIA ALGRKF+R+SLGGV+DEA+IRGHRRTY+G++PGR+I G+
Sbjct: 385 ILCFVGPPGVGKTSLGKSIARALGRKFVRVSLGGVRDEAEIRGHRRTYVGALPGRIIQGI 444
Query: 402 KRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVA 461
K+ G NPV +LDEIDK G+D RGDPASALLEVLDPEQN F+DHYL + +DLS+V+F+A
Sbjct: 445 KKAGTSNPVFMLDEIDKLGADFRGDPASALLEVLDPEQNYAFSDHYLELDYDLSRVLFIA 504
Query: 462 TANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVK 521
TAN IP PL DRME+IE+ GYT +EKL+IA R+L+PR ++QHGL E I + ++
Sbjct: 505 TANYLDLIPAPLRDRMEIIEISGYTQDEKLQIARRYLVPRQVEQHGLKPEQFSITDEALR 564
Query: 522 LVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADG 581
+I YTRE+GVR LER +A++ R A K+A
Sbjct: 565 EIIDGYTRESGVRQLERTIASVVRGVAKKIA----------------------------- 595
Query: 582 AEVEMEVIPMG--ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGIS 639
MG ES H VD L++ LG ++ E AER PG++
Sbjct: 596 ---------MGEIESAH-------------VDVGDLKEYLGARKYFS-EVAERTEEPGVA 632
Query: 640 VGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAED 699
GL WT GG++ F+EA+A RG G L LTGQLGDV+KESAQ+A +V+A A +L +
Sbjct: 633 TGLAWTPVGGDILFIEASAARGNGRLILTGQLGDVMKESAQLAYFYVKAHAEELGI---- 688
Query: 700 GMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVL 759
++ + D+H+H PAGAVPKDGPSAGV L+TAL SLF+++RVR AMTGE+TLRGLVL
Sbjct: 689 PLDAFRYWDVHVHVPAGAVPKDGPSAGVALLTALASLFTQRRVRHTVAMTGEITLRGLVL 748
Query: 760 PVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
PVGG+K+K+LAA R GI+ V+LPE+N KD+ E+ L LEI+ +R+ +VLE+A E
Sbjct: 749 PVGGIKEKVLAAKRAGIQTVLLPEKNQKDIEEIKPESLEGLEIVYVRRVHEVLERALE 806
>gi|149918038|ref|ZP_01906531.1| ATP-dependent protease La [Plesiocystis pacifica SIR-1]
gi|149821043|gb|EDM80449.1| ATP-dependent protease La [Plesiocystis pacifica SIR-1]
Length = 803
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 337/749 (44%), Positives = 466/749 (62%), Gaps = 65/749 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+V+E L R + L T Y AR+ + PD A S + K A L
Sbjct: 87 LVVETLERVKIDALETSDPYLQARVHAT-------------PDENAQSTEAKILAESLRE 133
Query: 132 VLEQ--KQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATEL 189
+ + + GG + + + + + AD ++ ++ E +L +VD+ RL
Sbjct: 134 HIRELAGEAGGGLVEAVSKDMRPSEFADAVASNLPLTREAGFEVLVTVDVPERLRLVARY 193
Query: 190 VDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD-NDDDEDDLVALERKM 248
V+ ++ + +KI ++V +L K Q++ +LR++M+AI+ ELGD N +DED++ L K
Sbjct: 194 VNEARETQEMRQKIDEEVRKRLGKQQRDHILRERMKAIQSELGDGNGEDEDEVAKLRAKF 253
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAK 308
+ +P K V++EL+RL K+ P P + +R YLE +++LPW+ +E +D DL A
Sbjct: 254 EGIELPEEAAKVVERELKRLTKLNPAHPEFNVARTYLETLSELPWDTRAEAVD-DLDAVA 312
Query: 309 ERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF 368
++LD DHYGL VK+RI+E++AV KL ++G +LC GPPGVGKTSL SIA A R F
Sbjct: 313 KQLDDDHYGLDEVKERILEHMAVLKLSKGSKGTILCLAGPPGVGKTSLGRSIAEATNRPF 372
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
+RI+LGGV+DEA+IRGHRRTYIG++PGR+I+ +++ GV NPVMLLDE+DK G P
Sbjct: 373 VRIALGGVRDEAEIRGHRRTYIGALPGRIINAVRKSGVKNPVMLLDEVDKLSQGFSGSPE 432
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
+ALLE+LDPEQN TF DHYL +PFD+S+V+FV TAN + PL DR+E+++L GYTPE
Sbjct: 433 AALLELLDPEQNDTFTDHYLELPFDMSEVMFVVTANDLSRMSAPLRDRLEIVQLSGYTPE 492
Query: 489 EKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA 548
EKL IA HL+PR LD++ L + + + ++ VI YTREAGVR L R + LARA A
Sbjct: 493 EKLEIARDHLLPRQLDENALEPGTMLLEDEALRQVITDYTREAGVRQLGREIGRLARAVA 552
Query: 549 VKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPL 608
+KVA + E AE + E I H
Sbjct: 553 LKVARRSPE------------------------AEADAEAI------H------------ 570
Query: 609 VVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLT 668
++ LE LG RF + E AER A PG++ GL WT GG++ F+E + M GKG L +T
Sbjct: 571 -IEAEELEDYLGKRRFFN-EVAERTAVPGVATGLAWTPVGGDILFIETSQMPGKGALQIT 628
Query: 669 GQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVT 728
GQLGDV+KESA+ ALT+VR+ A L++ N L GRD+HIH PAGAVPKDGPSAGVT
Sbjct: 629 GQLGDVMKESARAALTYVRSNAESLEV----DPNFLDGRDVHIHVPAGAVPKDGPSAGVT 684
Query: 729 LVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKD 788
+ TAL SL + +RVR+DTAMTGE TLRG VLPVGG+K K+LAAHR GI RVILP RN +D
Sbjct: 685 IFTALTSLLTGRRVRSDTAMTGECTLRGRVLPVGGIKAKVLAAHRAGITRVILPHRNARD 744
Query: 789 LVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+ +VP V +++E + A+ M+ VLE A E
Sbjct: 745 VDDVPEEVRSTMEFVFAEDMQTVLEAALE 773
>gi|357634598|ref|ZP_09132476.1| anti-sigma H sporulation factor, LonB [Desulfovibrio sp. FW1012B]
gi|357583152|gb|EHJ48485.1| anti-sigma H sporulation factor, LonB [Desulfovibrio sp. FW1012B]
Length = 838
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 335/756 (44%), Positives = 481/756 (63%), Gaps = 65/756 (8%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFI 116
+ R ++ P GR+ V+++GL R V+ + ++ A++ + + + +EQ+
Sbjct: 111 IMRMLKMPDGRLK--VLVQGLTRARVEHFISSDPFHLAKVEIIGERESKEVTLEQE---- 164
Query: 117 ALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
A+ R + + +++S+ + + VL +LAD+ ++ + EE +L+
Sbjct: 165 AMMRAAREQSEKILSL--RGMASADIMAVLNSVNEPGRLADLVASNLRMRVEEAQRLLEC 222
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
D RL E + + + + KI + + K+QK+F LR+QM+AI+ ELG+ +
Sbjct: 223 EDPIERLRLVNEQLVKEAEVATMQAKIQNMAKEGMDKAQKDFFLREQMKAIRRELGEGGE 282
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+ D+L L+ + AGMP + K K+L+RL M P R YL+ + DLPW+K
Sbjct: 283 ESDELEELKEALDKAGMPKEVKKESDKQLKRLVSMHPDSSEAGVIRTYLDWLVDLPWKKL 342
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
S++ LD+K AK LD DH+ L +VK+RI+EYL+VRKL P +GP+LCFVGPPGVGKTSL
Sbjct: 343 SKD-RLDIKEAKRILDEDHFDLEKVKERILEYLSVRKLNPGMKGPILCFVGPPGVGKTSL 401
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
SIA ALGRKF+R+SLGG++DEA+IRGHRRTYIGSMPGR+I +K+ G NPV++LDEI
Sbjct: 402 GRSIARALGRKFVRMSLGGMRDEAEIRGHRRTYIGSMPGRVIQSIKQAGTRNPVIMLDEI 461
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK GSD RGDP+SALLEVLDPEQN +F+DHYLNVPFDLSKV+F+ TAN IP PLLDR
Sbjct: 462 DKVGSDFRGDPSSALLEVLDPEQNFSFSDHYLNVPFDLSKVMFICTANILDTIPAPLLDR 521
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
ME+I LPGYT +EK++IA R+++PR ++++GL + + + + ++ +I+ YTREAG+RNL
Sbjct: 522 MELIRLPGYTEQEKIKIARRYILPRQIEENGLAKDDMVLSDQVLARIIRDYTREAGLRNL 581
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER + ++AR A K AE E+
Sbjct: 582 EREVGSVARKVARKKAEGEKP--------------------------------------- 602
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRF-DDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
FR+T+ A LEK+LGP F DD AE PG++VGL WT GG + +E
Sbjct: 603 ----PFRVTA------ASLEKLLGPAYFMDDEREAE--LPPGVAVGLAWTPVGGAILHIE 650
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ GKG L LTG+LGDV+KESAQ ALT+ ++RA +L + E + + DIHIH PA
Sbjct: 651 VATLPGKGGLQLTGKLGDVMKESAQAALTYAKSRAKELGINPE----IFEKNDIHIHVPA 706
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAGVTLVTAL+S + +RV +D AMTGE+TLRG VLPVGG+K+K+LAA G
Sbjct: 707 GATPKDGPSAGVTLVTALISALTNQRVGSDVAMTGEITLRGRVLPVGGIKEKVLAAVAAG 766
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+KR+I+P +N+KDL ++P + +++ +R+++V
Sbjct: 767 MKRIIIPAQNMKDLRDIPRDLRGRVKVFPVERIDEV 802
>gi|339484278|ref|YP_004696064.1| anti-sigma H sporulation factor, LonB [Nitrosomonas sp. Is79A3]
gi|338806423|gb|AEJ02665.1| anti-sigma H sporulation factor, LonB [Nitrosomonas sp. Is79A3]
Length = 791
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 324/748 (43%), Positives = 477/748 (63%), Gaps = 63/748 (8%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T+ + +G+ RF ++E+ + ARI ++ T Q E AL+ Q + A+E
Sbjct: 92 THHAICQGIERFQIEEIIEGYPFLAARIKRIKETAQVTTQAE------ALALQLRERAVE 145
Query: 129 LISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATE 188
++S+L L T LADI + + E+ ++L++VD + RL K +
Sbjct: 146 ILSLL--PGVPAELAHALQATRAPSDLADITASLLDTEVVEKQMLLETVDTEERLQKVLQ 203
Query: 189 LVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKM 248
++ R ++ +R++++I ++ + Q+ ++++LL +Q++AI++ELG++ ++ ++ L +
Sbjct: 204 ILSRRIEVLRLSQEIGERTKEQMEDRERKYLLHEQLKAIQKELGEDGGNDQEIAQLNEAI 263
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAK 308
A MPS+I +KEL+RL++M Y+ YLE + +LPW + EE +DL +A+
Sbjct: 264 TKASMPSDIEAQARKELQRLQRMPSASSEYSMLHTYLEWMTELPW-RLPEETPIDLNSAR 322
Query: 309 ERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF 368
+ L++DH+GL R+KQRIIE+LAV+KLKP R P+LCFVGPPGVGKTSL SIA AL R F
Sbjct: 323 QILEADHFGLERIKQRIIEFLAVQKLKPQGRAPILCFVGPPGVGKTSLGQSIARALQRPF 382
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
+R+SLGGV DEA++RGHRRTYIG+MPG ++ G+++ N VM+LDEIDK + ++GDP+
Sbjct: 383 VRVSLGGVHDEAEMRGHRRTYIGAMPGNIVQGIRKASARNCVMMLDEIDKMSASIQGDPS 442
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
+ALLEVLDPEQN TF D+YL VPFDLS+VIF+ATAN + PP+ DRME+I+LPGYT E
Sbjct: 443 AALLEVLDPEQNSTFRDNYLGVPFDLSRVIFIATANVIDNVSPPVRDRMEIIDLPGYTQE 502
Query: 489 EKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA 548
EKL+IA+R+L+ R + +GL E Q+ + +I YTREAGVR ER + + R AA
Sbjct: 503 EKLQIALRYLVQRQSEANGLREEQCQLTSEALASIIADYTREAGVRQFEREIGRVMRHAA 562
Query: 549 VKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPL 608
+++AE EQ++ VH
Sbjct: 563 LRIAEGEQQK-------VH----------------------------------------- 574
Query: 609 VVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLT 668
+D A L+ +LG ++ + E A PG++ GL WT GG++ F+EAT + G G L LT
Sbjct: 575 -IDAADLDAILGSKKY-EHELALHTDLPGVATGLAWTPVGGDILFIEATRVNGSGRLILT 632
Query: 669 GQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVT 728
GQLGDV+KESAQ ALT V+ARA+DL + A +L G D+H+H PAGA+PKDGPSAGV
Sbjct: 633 GQLGDVMKESAQAALTLVKARASDLNIPA----SLFDGVDVHLHVPAGAIPKDGPSAGVA 688
Query: 729 LVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKD 788
+ ALVSLF+ + V D AMTGE++LRGLVLPVGG+K+KILAA R G++ V+LP RN KD
Sbjct: 689 MFIALVSLFTNRPVCHDVAMTGEISLRGLVLPVGGIKEKILAAERAGLRTVLLPARNQKD 748
Query: 789 LVEVPAAVLASLEIILAKRMEDVLEQAF 816
L ++P A +++ +L + +D ++ A
Sbjct: 749 LRDLPEATRTAMQFVLLETADDAIQVAL 776
>gi|260892396|ref|YP_003238493.1| ATP-dependent protease La [Ammonifex degensii KC4]
gi|260864537|gb|ACX51643.1| ATP-dependent protease La [Ammonifex degensii KC4]
Length = 797
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 340/760 (44%), Positives = 470/760 (61%), Gaps = 78/760 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ-VEQDPDFIALSRQF 122
P G T V++EGL R ++ ++ K+E+EQ +E+ P +
Sbjct: 85 PGG--TIRVLVEGLARARIRHYLQEDPFF----------KVEVEQFIEEQPR----TSHI 128
Query: 123 KATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSV 177
+A L+ EQ K R + L+ + I +LADI + + E++ +L+++
Sbjct: 129 EALMRSLLHQFEQYVKLSKRIPPETLMAIMSIEEPGRLADIVASHLALKIEDKQALLEAI 188
Query: 178 DLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDD 237
D+ RL K +V R L+ + + +I +V Q+ KSQKE+ LR+QM+AI++ELG+ D+
Sbjct: 189 DVATRLEKLCTIVARELEIVELERRINIRVRKQMEKSQKEYYLREQMKAIQKELGEKDER 248
Query: 238 EDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKAS 297
+ K+ A +P + + KE+ RL+KM P T R YL+ I LPW K +
Sbjct: 249 LAEGEEYREKIAQAKLPKEVEERALKEVERLEKMPPMAAEATVVRTYLDWILALPWNKTT 308
Query: 298 EEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLA 357
+ LD+ A + LD DHYGL K+RI+EYLAVRKL + +GP+LCFVGPPGVGKTSLA
Sbjct: 309 RD-RLDIDVAAKILDEDHYGLREPKERILEYLAVRKLVKNMKGPILCFVGPPGVGKTSLA 367
Query: 358 SSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEID 417
SIA AL RKF+R+SLGGV+DEA+IRGHRRTY+G++PGR+I G+++ G NPV LLDEID
Sbjct: 368 RSIARALERKFVRVSLGGVRDEAEIRGHRRTYVGALPGRIIQGMRQAGSKNPVFLLDEID 427
Query: 418 KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRM 477
K SD RGDPA+ALLEVLDPEQN F+DHYL +PFDLS+V+F+ TAN IP PLLDRM
Sbjct: 428 KLSSDFRGDPAAALLEVLDPEQNHAFSDHYLEIPFDLSQVLFITTANYLYNIPRPLLDRM 487
Query: 478 EVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLE 537
EVI++PGYT EEK+ IA RHLIP+ L +HGL E L E ++ +I+ YTREAGVRNLE
Sbjct: 488 EVIQIPGYTEEEKVEIARRHLIPKQLKEHGLEPEQLTFSENAIRRIIREYTREAGVRNLE 547
Query: 538 RNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHE 597
R +AA+ R A ++ E GE H
Sbjct: 548 RQIAAVCRKTAKRIVSGE------------------------------------GEKVHA 571
Query: 598 VSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEAT 657
+ LEK LG P+F + AE+ G+++GL WT GGEV +E +
Sbjct: 572 TAQN-------------LEKFLGIPKFRPSQ-AEKEDEVGVALGLAWTENGGEVLAIEVS 617
Query: 658 AMR-GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ GKG+L LTG+LG+V++ESAQ + ++VR+R+ L ++ED + D+HIH P G
Sbjct: 618 LLPGGKGKLILTGKLGEVMRESAQASFSYVRSRSRQLG-ISED---FHEKCDVHIHVPEG 673
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAG+T+ TAL S + K+VR + AMTGE+TLRG VLPVGG+K+K+LAAHR G+
Sbjct: 674 ATPKDGPSAGITMATALASALTGKKVRHEVAMTGEITLRGRVLPVGGIKEKVLAAHRAGV 733
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K VILPE N +DL E+P++V L + + M++VL +A
Sbjct: 734 KTVILPEENRRDLEEIPSSVKNKLRFVFVRHMDEVLREAL 773
>gi|345890123|ref|ZP_08841076.1| lon protease [Bilophila sp. 4_1_30]
gi|345038845|gb|EGW43226.1| lon protease [Bilophila sp. 4_1_30]
Length = 821
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 342/765 (44%), Positives = 481/765 (62%), Gaps = 75/765 (9%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GR+ +V +G+ R + +L+ G Y +A + + + + EQ+ AL
Sbjct: 124 RLLKMPDGRIKALV--QGVSRARLVDLNESGPYLSANVELMPEPEAVAPESEQE----AL 177
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
R + ++S+ + TG VL +L+D+ A+ + EE +L VD
Sbjct: 178 IRFAREQCERILSL--RGIPTGDIMGVLSNVNEPGRLSDLIAANLRLKMEEAQEILQCVD 235
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS------KSQKEFLLRQQMRAIKEELG 232
RL L+ HL + +E T +++ Q S K+QKE+ LR+Q++AI++ELG
Sbjct: 236 PMDRL----RLIITHL--VHESEVATMQIKIQTSAREGMDKAQKEYYLREQLKAIRKELG 289
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D D +++L + + ++ AG+P+++ K K+L+RL M + R YL+ +A+LP
Sbjct: 290 DGPDADEELEDITKAIEKAGLPADVRKEADKQLKRLATMHGDSAEASVVRTYLDWLAELP 349
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W+K S++ LD+ AK+ LD DHYGL ++K RI+EYL+VRKL PD++GP+LCF GPPGVG
Sbjct: 350 WKKMSKD-QLDIVKAKDVLDEDHYGLTKIKDRILEYLSVRKLNPDSKGPILCFAGPPGVG 408
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSL SIA ALGRKF RISLGG++DEA+IRGHRRTYIG+MPGR+I +K+ G NPV++
Sbjct: 409 KTSLGRSIARALGRKFQRISLGGMRDEAEIRGHRRTYIGAMPGRIIQAMKQAGTRNPVII 468
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK G+D RGDP+SALLE LDPEQN F+DHYLNVPFDLSKV+F+ TAN + IP P
Sbjct: 469 LDEIDKLGNDFRGDPSSALLEALDPEQNFNFSDHYLNVPFDLSKVLFICTANHLENIPGP 528
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DR+E+I LPGYT +EKL IA ++++P+ + ++GL L +P+A + +I+ YTREAG
Sbjct: 529 LRDRLEIISLPGYTQQEKLAIARKYILPKEMHENGLKDRELTLPDAAMNRIIREYTREAG 588
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
+RNLER + + R K+A ++ E + P
Sbjct: 589 LRNLEREIGTVCR----KIARRKAEGSKPP------------------------------ 614
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
FR+T+ A L ++LG P F D E AER PG+++GL WT GGE+
Sbjct: 615 ---------FRVTA------AGLPRLLGAPIFIDDE-AERKLIPGVALGLAWTPAGGEIL 658
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
++E +A++GKG L LTGQLGDV+KESAQ ALT+ RA+A +L + + + DIHIH
Sbjct: 659 YIEVSAIKGKGGLTLTGQLGDVMKESAQAALTYARAKADELGIAP----DFAEHTDIHIH 714
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
PAGA PKDGPSAGVTLVTAL+S + K VR D MTGE+TLRG VLPVGG+K+K+LA
Sbjct: 715 VPAGATPKDGPSAGVTLVTALISALTGKTVRGDICMTGEITLRGRVLPVGGIKEKVLAGV 774
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GI VILP +N KDL E+P + + + ++DVL FE
Sbjct: 775 ARGIGHVILPAKNQKDLEEIPQELRRKIVVHTVDSIDDVLPLVFE 819
>gi|296134051|ref|YP_003641298.1| ATP-dependent protease La [Thermincola potens JR]
gi|296032629|gb|ADG83397.1| ATP-dependent protease La [Thermincola potens JR]
Length = 777
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 334/763 (43%), Positives = 473/763 (61%), Gaps = 79/763 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T +++EGL R V + Y+ I EQ E P+ AL R
Sbjct: 87 PGG--TIRILVEGLARAKVVKFLEHEPYFKVEIEEY------AEQHEVTPEIEALMRS-- 136
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L++ EQ K R + ++ V + +LADI V+ + E++ +L++++
Sbjct: 137 -----LVNQFEQYVKMSKRIPPETVITVVNLEDPGRLADIIVSHLALKTEDKQRVLEAIE 191
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
K RL E++ + ++ + + KI +V Q+ K+QKE+ LR+Q++AI++ELG+ D+
Sbjct: 192 AKKRLEILCEILAKEMEILELERKINLRVRKQMEKTQKEYYLREQLKAIQKELGEKDEKT 251
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ K++ A MP + + KE+ RL KM P R YL+ + LPW K +
Sbjct: 252 AETEEYRAKIKKARMPKEVEEKALKEVERLDKMPPMAAESGVIRTYLDWLLALPWRKTTR 311
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD+ A+ L+ DHYGL +VK+RI+EYLA+RKL +GP+LCFVGPPGVGKTSLA
Sbjct: 312 D-RLDINQAEMVLNEDHYGLDKVKERILEYLAIRKLAKKLKGPILCFVGPPGVGKTSLAK 370
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA AL R F+R+SLGGV+DEA+IRGHRRTY+G+MPGR+I G+K+ G NPV LLDEIDK
Sbjct: 371 SIARALERNFVRMSLGGVRDEAEIRGHRRTYVGAMPGRIIQGIKQAGSRNPVFLLDEIDK 430
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
D RGDP++ALLEVLDPEQN +F+DHY+ PFDLS V+F+ TAN P+P PLLDRME
Sbjct: 431 MSMDFRGDPSAALLEVLDPEQNNSFSDHYIESPFDLSDVMFITTANALHPVPRPLLDRME 490
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI + GYT EEK++IA RHLIP+ L +HGL + LQ+ E +++ +I+ YTREAGVRNLER
Sbjct: 491 VIYISGYTEEEKVQIARRHLIPKQLKEHGLKAGQLQMSENVIRKIIREYTREAGVRNLER 550
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+AA+ R AA ++ ++ Q++ S +++
Sbjct: 551 EIAAICRKAARQIVQKNQKRVKVSIQNL-------------------------------- 578
Query: 599 SNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
E+ LG P RF AE+ GI+ GL WT GG+V VE
Sbjct: 579 -----------------EQFLGIPSYRFG---VAEKEDEVGIATGLAWTETGGDVLAVEV 618
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
T M+G G+L LTG+LGDV+KESAQ A +++R++A++L++ + D HIH P G
Sbjct: 619 TVMKGTGKLTLTGKLGDVMKESAQAAFSYIRSKASELKI----DPDFYDKYDTHIHVPEG 674
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A+PKDGPSAG+T+ TAL S ++++ R + AMTGE+TLRG VLPVGG+K+K+LAAHR GI
Sbjct: 675 AIPKDGPSAGITMATALASALTQRKTRREVAMTGEITLRGRVLPVGGIKEKVLAAHRAGI 734
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
K VILP+ N KDL E+P V + +E +L + M++VL +A + G
Sbjct: 735 KVVILPKDNKKDLEEIPQKVKSKMEFVLVEHMDEVLARALQEG 777
>gi|218780718|ref|YP_002432036.1| ATP-dependent protease La [Desulfatibacillum alkenivorans AK-01]
gi|218762102|gb|ACL04568.1| ATP-dependent protease La [Desulfatibacillum alkenivorans AK-01]
Length = 785
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 332/772 (43%), Positives = 476/772 (61%), Gaps = 72/772 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE--MTKIEM 106
G AA + +++G + ++++G+ RF ++E + Y AR++ LE K +
Sbjct: 82 GTAAAIMKMAKGAPDKAQ-----MLVQGITRFKIEEYTQEEPYLMARVTPLEDIYPKGKG 136
Query: 107 EQVEQ-DPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
+++E + + L + L + + KT G +AD+ ++ +
Sbjct: 137 KEIEALTANLVTLFGKIVNYTSLLPPEMAEWIKTVGDAGT---------VADVVASTIQS 187
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
+ EE+ +L++ ++ RL T++ L+ + + +KI +V+G + K+Q+++ LRQQ++
Sbjct: 188 TLEEKQKILETREVDKRLIAVTKMASHQLEILELGDKIQTQVKGDMDKTQRDYYLRQQLK 247
Query: 226 AIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYL 285
AI++ELG+ D + ++ E K++ +P K ++EL RL +M P YT + YL
Sbjct: 248 AIQQELGEGDKENVEVQEYEAKIKEMNLPEAAQKEAERELSRLSRMHPSSAEYTVAATYL 307
Query: 286 ELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCF 345
+ I LPW AS E +LD+ A+ LD+DH+GL + K+RI+EYLAVRKLKPD++GP++CF
Sbjct: 308 DWITSLPWH-ASTEDNLDIAEARRILDADHFGLEKPKKRILEYLAVRKLKPDSKGPIICF 366
Query: 346 VGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVG 405
GPPG GKTSL SIA ALGR F+RISLGGV+DEA+IRGHRRTY+G++PGR+I ++R
Sbjct: 367 AGPPGTGKTSLGRSIARALGRNFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQNIRRAE 426
Query: 406 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 465
NP+ +LDE+DK G+D RGDP+SALLEVLDPEQN TF+DHYL+VPFDLSKV+F+ATAN
Sbjct: 427 SNNPIFMLDEVDKLGNDFRGDPSSALLEVLDPEQNDTFSDHYLDVPFDLSKVMFIATANI 486
Query: 466 AQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQ 525
IPP L DRMEVIEL GYT EEK++IA ++LIPR D HGL + ++I + +K +I
Sbjct: 487 LDTIPPALRDRMEVIELLGYTMEEKVKIAKKYLIPRQRDAHGLKASDIKITDGAIKQIIN 546
Query: 526 RYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVE 585
YTREAG+RNLER +A++ R AA K+AE +E KD+H P+ RL
Sbjct: 547 GYTREAGLRNLEREIASVCRGAARKIAEGLEESVTVKPKDLHEYIGPI--KRL------- 597
Query: 586 MEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWT 645
E A V PG+ GL WT
Sbjct: 598 -----------------------------------------NEKAVTVKVPGVVNGLAWT 616
Query: 646 NFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQ 705
GGE+ VE+ AM G+ L LTGQLG V+KESAQ AL+++R+RA L++ + +
Sbjct: 617 PTGGEMLTVESVAMPGQKGLTLTGQLGGVMKESAQAALSFIRSRADKLKV----DPDFFK 672
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
+IH+H PAGA+PKDGPSAGVT++TAL SL + K V+ D AMTGE+TLRG VLPVGG+K
Sbjct: 673 EHEIHVHVPAGAIPKDGPSAGVTILTALTSLCTGKVVKKDLAMTGEITLRGQVLPVGGIK 732
Query: 766 DKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+LAA+R G K +ILP+ N KDL ++P + + ME VL A E
Sbjct: 733 EKVLAAYRAGAKELILPKWNEKDLEDIPESAREKITFHFVDSMEQVLALALE 784
>gi|317484765|ref|ZP_07943664.1| ATP-dependent protease La [Bilophila wadsworthia 3_1_6]
gi|316923972|gb|EFV45159.1| ATP-dependent protease La [Bilophila wadsworthia 3_1_6]
Length = 820
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 341/765 (44%), Positives = 481/765 (62%), Gaps = 75/765 (9%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GR+ +V +G+ R + +L+ G Y +A + + + + EQ+ AL
Sbjct: 123 RLLKMPDGRIKALV--QGVSRARLVDLNESGPYLSANVELMPEPEAVAPESEQE----AL 176
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
R + ++S+ + TG VL +L+D+ A+ + EE +L +D
Sbjct: 177 IRFAREQCERILSL--RGIPTGDIMGVLSNVNEPGRLSDLIAANLRLKMEEAQEILQCID 234
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS------KSQKEFLLRQQMRAIKEELG 232
RL L+ HL + +E T +++ Q S K+QKE+ LR+Q++AI++ELG
Sbjct: 235 PMDRL----RLIITHL--VHESEVATMQIKIQTSAREGMDKAQKEYYLREQLKAIRKELG 288
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D D +++L + + ++ AG+P+++ K K+L+RL M + R YL+ +A+LP
Sbjct: 289 DGPDADEELEDITKAIEKAGLPADVRKEADKQLKRLATMHGDSAEASVVRTYLDWLAELP 348
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W+K S++ LD+ AK+ LD DHYGL ++K RI+EYL+VRKL PD++GP+LCF GPPGVG
Sbjct: 349 WKKMSKD-QLDIVKAKDVLDEDHYGLTKIKDRILEYLSVRKLNPDSKGPILCFAGPPGVG 407
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSL SIA ALGRKF RISLGG++DEA+IRGHRRTYIG+MPGR+I +K+ G NPV++
Sbjct: 408 KTSLGRSIARALGRKFQRISLGGMRDEAEIRGHRRTYIGAMPGRIIQAMKQAGTRNPVII 467
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK G+D RGDP+SALLE LDPEQN F+DHYLNVPFDLSKV+F+ TAN + IP P
Sbjct: 468 LDEIDKLGNDFRGDPSSALLEALDPEQNFNFSDHYLNVPFDLSKVLFICTANHLENIPGP 527
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DR+E+I LPGYT +EKL IA ++++P+ + ++GL L +P+A + +I+ YTREAG
Sbjct: 528 LRDRLEIISLPGYTQQEKLAIARKYILPKEMHENGLKDRELTLPDAAMNRIIREYTREAG 587
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
+RNLER + + R K+A ++ E + P
Sbjct: 588 LRNLEREIGTVCR----KIARRKAEGSKPP------------------------------ 613
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
FR+T+ A L ++LG P F D E AER PG+++GL WT GGE+
Sbjct: 614 ---------FRVTA------AGLPRLLGAPIFIDDE-AERKLIPGVALGLAWTPAGGEIL 657
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
++E +A++GKG L LTGQLGDV+KESAQ ALT+ RA+A +L + + + DIHIH
Sbjct: 658 YIEVSAIKGKGGLTLTGQLGDVMKESAQAALTYARAKADELGIAP----DFAEHTDIHIH 713
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
PAGA PKDGPSAGVTLVTAL+S + K VR D MTGE+TLRG VLPVGG+K+K+LA
Sbjct: 714 VPAGATPKDGPSAGVTLVTALISALTGKTVRGDICMTGEITLRGRVLPVGGIKEKVLAGV 773
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GI VILP +N KDL E+P + + + ++DVL FE
Sbjct: 774 ARGIGHVILPAKNQKDLEEIPQELRRKIVVHTVDSIDDVLPLVFE 818
>gi|328954017|ref|YP_004371351.1| anti-sigma H sporulation factor LonB [Desulfobacca acetoxidans DSM
11109]
gi|328454341|gb|AEB10170.1| anti-sigma H sporulation factor, LonB [Desulfobacca acetoxidans DSM
11109]
Length = 803
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 342/747 (45%), Positives = 472/747 (63%), Gaps = 65/747 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
++++GL RF V+EL Y AR+S + T+ +E D +L FK + EL
Sbjct: 107 LLIQGLYRFKVEELVDTEPYIQARVSPI--TETYEADLEIDAMVSSLKGMFKKMS-ELSP 163
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
L + G + L + LAD+ S I+ E+ +L+++++K RL K L+
Sbjct: 164 YL--PTELGAMVQELDDP---RVLADVTGGSLNIAKTEKQDLLETIEVKERLQKVLRLIS 218
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
R ++ + + ++I V+ ++ K+QK++ LR+Q++A+++ELG+ D+ ++ L ++ A
Sbjct: 219 REIEILELGKQIQANVKTEMDKAQKDYYLREQIKALQKELGEGDERSREVDELRERLLEA 278
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
G+P K ++EL RL ++ P + R YLE + +LPW +E+ LDL AK L
Sbjct: 279 GLPEAALKEAERELTRLSRIPSTSPDHQVVRTYLEWMIELPWNVTTED-RLDLAEAKRIL 337
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHY L +VK+RI+E+LAVR+LKPD +G +LCFVGPPG GKTSL SIA AL RKF+R+
Sbjct: 338 DEDHYNLEKVKKRILEFLAVRQLKPDMKGSILCFVGPPGTGKTSLGKSIARALERKFVRL 397
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGV+DEA+IRGHRRTY+G++PGR+I ++R G NPV +LDEIDK G+D RGDPASAL
Sbjct: 398 SLGGVRDEAEIRGHRRTYVGALPGRIIQSIRRAGSNNPVFILDEIDKIGADFRGDPASAL 457
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQN +F+DHYL V FDLSKV+F+ TAN IPP L DRMEV++LPGYT EEK+
Sbjct: 458 LEVLDPEQNSSFSDHYLEVGFDLSKVMFITTANMLDTIPPALRDRMEVLQLPGYTEEEKI 517
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQI-PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
+IA +L+PR L+ HGL E L I PEAM + V YTREAG+RNLER +AAL R+ A +
Sbjct: 518 QIAFSYLLPRQLEAHGLKPEQLTITPEAM-RRVTADYTREAGLRNLEREVAALCRSVARE 576
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
VAE +T+ +
Sbjct: 577 VAEG-------------------------------------------------LTTARTI 587
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
E + LG +F RE A PGI+ GL WT GGE+ F+E M G +L LTGQ
Sbjct: 588 QEEDVPTYLGQAKF-FRETALDHPEPGIATGLAWTPVGGEILFIETLRMPGSSKLKLTGQ 646
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
+G+V++ES + AL+++RARA + V ED + DIH+H P+GA+PKDGPSAGV ++
Sbjct: 647 IGEVMRESVEAALSFIRARAPYIG-VEED---FFKDIDIHVHVPSGAIPKDGPSAGVAML 702
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TALVSLFS + V+ AMTGE+TLRG ++PVGG+KDK+LAAHR GIK VILP +N KDL
Sbjct: 703 TALVSLFSDRPVKKGLAMTGEITLRGHIMPVGGIKDKVLAAHRAGIKEVILPAQNAKDLE 762
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFE 817
++P V L I L +RM+ VLE AF+
Sbjct: 763 DIPPNVKDELLIHLVERMDQVLEIAFD 789
>gi|323703640|ref|ZP_08115283.1| ATP-dependent protease La [Desulfotomaculum nigrificans DSM 574]
gi|333922905|ref|YP_004496485.1| anti-sigma H sporulation factor LonB [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531412|gb|EGB21308.1| ATP-dependent protease La [Desulfotomaculum nigrificans DSM 574]
gi|333748466|gb|AEF93573.1| anti-sigma H sporulation factor, LonB [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 810
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 339/758 (44%), Positives = 465/758 (61%), Gaps = 75/758 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EG+ R + + + Y+ ++E+EQ + + A + +
Sbjct: 81 PGG--TIRVLVEGIARAKILKYQSTDPYF----------RVEIEQYAESNEKNA---EIE 125
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
A L+ EQ K R + ++ V + +LADI + + E++ +L++VD
Sbjct: 126 ALMRSLVYQFEQYVKLSKRIPPETVVSVVNLEEPGRLADIIASHLALRIEDKQKVLEAVD 185
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL K +V + L+ + + KI +V Q+ KSQKE+ LR+QM+AI++ELG+ D+
Sbjct: 186 IVARLEKLCAIVAKELEIVELERKINIRVRKQMEKSQKEYYLREQMKAIQKELGEKDERA 245
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ L K+ +P + + KE+ RL+KM P T R YL+ + LPW K++
Sbjct: 246 AECEELREKIARIKLPKEVEEKALKEVDRLEKMPPMAAEATVVRNYLDWLLSLPWSKSTR 305
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD+KAA++ LD DHYGL K+RIIEYLA+RKL +GP+LC VGPPGVGKTSL
Sbjct: 306 D-RLDIKAAEQILDQDHYGLKVPKERIIEYLAIRKLAKKMKGPILCLVGPPGVGKTSLGR 364
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA AL RKFIRISLGGV+DEA+IRGHRRTY+G+MPGR+I G+++ G NPV LLDEIDK
Sbjct: 365 SIARALERKFIRISLGGVRDEAEIRGHRRTYVGAMPGRVIQGMRQAGSKNPVFLLDEIDK 424
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
SD RGDPA+ALLEVLDPEQN TF+DHY+ PFDLS V+F+ TAN IP PLLDRME
Sbjct: 425 MASDFRGDPAAALLEVLDPEQNSTFSDHYIESPFDLSNVMFITTANNMWNIPRPLLDRME 484
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI++ GYT EEKL IA RHL+P+ + +HGL E L + E + VI+ YTRE+GVRNLER
Sbjct: 485 VIQISGYTEEEKLEIAKRHLLPKQIKEHGLTEEMLTVSENTILKVIREYTRESGVRNLER 544
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
NLA+L R AA K+ +GE+
Sbjct: 545 NLASLCRKAAKKIV--------------------------------------VGEAAK-- 564
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
+IT+ LE+ LG P++ AE+ GI G+ WT GG+ +E T
Sbjct: 565 ---VKITT------QNLEQFLGIPKY-RYGVAEQNDEVGIVTGMAWTEVGGDTLVIEVTT 614
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+G G L LTG+LGDV+KESAQ ++VR+RA +L + E L + D+HIH P GA+
Sbjct: 615 YKGNGRLTLTGKLGDVMKESAQAGYSYVRSRAGELGIDEE----LFEKWDMHIHIPEGAI 670
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+T+ TA+ S+ + ++VR D AMTGE+TLRG VLPVGG+K+K++AAHR GIK
Sbjct: 671 PKDGPSAGITMATAMASVLTGRKVRHDVAMTGEITLRGRVLPVGGIKEKVMAAHRAGIKV 730
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+ILP N KDL ++PA + L+ M+ VLE A
Sbjct: 731 IILPRDNQKDLEDIPANIKKQLQFKPVDHMDQVLEIAL 768
>gi|219850455|ref|YP_002464888.1| ATP-dependent protease La [Chloroflexus aggregans DSM 9485]
gi|219544714|gb|ACL26452.1| ATP-dependent protease La [Chloroflexus aggregans DSM 9485]
Length = 788
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 348/771 (45%), Positives = 473/771 (61%), Gaps = 83/771 (10%)
Query: 54 ALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP 113
A + R + P G V ++L+G R VQ + Y AR+S + +DP
Sbjct: 81 AAMIVRMMRLPQGGVQ--LLLQGQARIKVQHWVSIKPYPQARVS-----------ISRDP 127
Query: 114 DFIAL--SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHK--LADIFVASFEISFEE 169
+L S +A ++E + P H LAD+ A+ ++ ++
Sbjct: 128 HETSLETSGLARAALAGFQQIVELSPNLPDELAIAAANAP-HPGMLADLIAANLNLNLDD 186
Query: 170 QLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKE 229
Q +LD +D+ RL L+DR + + + K ++V +K+Q+E++LRQQ+ AIK
Sbjct: 187 QQAVLDMLDVTERLQHVLRLLDREREILMIGRKAQEEV----AKNQREYVLRQQLEAIKR 242
Query: 230 ELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIA 289
ELG+ DD ++ L R+++ A +P+ + ++EL RL++M P YT +R YL+ I
Sbjct: 243 ELGETDDHAVEIAELRRRLEEANLPTEARQEAERELSRLERMPPGAAEYTVARTYLDWIL 302
Query: 290 DLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDA------RGPVL 343
DLPW AS E +LD+ A+ LD DHY L R+K+RIIEYLAVRKL+ +A RGP+L
Sbjct: 303 DLPWH-ASTEDNLDITQARRVLDEDHYDLDRIKERIIEYLAVRKLRQEAGAGSETRGPIL 361
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
CFVGPPGVGKTSL +SIA ALGRKF+R++LGGV+DEA+IRGHRRTYIG++PGR+I GL R
Sbjct: 362 CFVGPPGVGKTSLGASIARALGRKFVRVALGGVRDEAEIRGHRRTYIGALPGRIIQGLSR 421
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
G NPV+LLDE+DK +GDPA+ALLEVLDPEQN F D YL+VPFDLSKV+FV TA
Sbjct: 422 AGSNNPVLLLDEVDKLSIGFQGDPAAALLEVLDPEQNVAFVDRYLDVPFDLSKVLFVCTA 481
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
NRA IPP LLDRME++EL GYT +EKL IA R+LIPR ++ GL ++ ++ +
Sbjct: 482 NRADTIPPALLDRMELLELAGYTEQEKLEIARRYLIPRQRNEQGLAERGPELTTTALQRL 541
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YT EAGVR+LER + A+ R A RLA+G E
Sbjct: 542 IREYTHEAGVRDLERRIGAVYRKMA---------------------------TRLAEGKE 574
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
+ P VD A L+ +LGPPRF E G+ GL
Sbjct: 575 L----------------------PAQVDAADLDDLLGPPRFRS-ETLLGENEVGVVTGLA 611
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG+V F+E + + G G+L LTGQLGDV+KESA+ ALT+ R+RA +L + AE +
Sbjct: 612 WTPTGGDVLFIEVSVIPGNGQLILTGQLGDVMKESARAALTYARSRAAELGIEAE----V 667
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
Q DIHIH PAGAVPKDGPSAG+T+ +AL+S +R+ V AMTGE+TLRG +LP+GG
Sbjct: 668 FQKSDIHIHVPAGAVPKDGPSAGITMASALISALTRREVDKRIAMTGEVTLRGKILPIGG 727
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQ 814
VK+K+LAA R G+++V+LP+ N DL EVPA LEI+L K M++VL +
Sbjct: 728 VKEKLLAAQRAGVRKVLLPKENEIDLREVPAEAKEQLEIVLVKHMDEVLRE 778
>gi|148258942|ref|YP_001243527.1| DNA-binding ATP-dependent protease La [Bradyrhizobium sp. BTAi1]
gi|146411115|gb|ABQ39621.1| DNA-binding ATP-dependent protease La [Bradyrhizobium sp. BTAi1]
Length = 786
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 336/774 (43%), Positives = 475/774 (61%), Gaps = 68/774 (8%)
Query: 44 HWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTK 103
H G A L R V P G T+ +++ G RF +Q + TA++ + ++
Sbjct: 76 QLHRIGTVAEIL---RYVTAPDG--THHLIVRGTRRFRIQSFLPGYPFLTAQVEEIGESE 130
Query: 104 IEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASF 163
+ ++E + L RQ AM+L+ + + G L LAD
Sbjct: 131 VLTPEIE---GRVQLLRQRAHEAMQLLPNVPAELVAG-----LDGVQSASALADFVANLM 182
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+I ++ +L++ D+K RL K + +Q +R++++I ++ + LS Q+E +LR+Q
Sbjct: 183 DIKPSDKQDILETFDVKTRLEKTIRFLTERIQVLRISKEIGEQTQETLSTQQREHILREQ 242
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
MR I+ +LG++DD +L L+R ++SAGMP + +KELRRL++M Y+ R
Sbjct: 243 MRQIQRQLGESDDRSAELEELKRAIESAGMPKEVEDQAKKELRRLERMPDAAGEYSMIRT 302
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +LPW K ++E +D++ A+ LD DHY L +VK+RI+EYLAVRKL PD + P+L
Sbjct: 303 YLDWLIELPWSKLADE-RIDIQEARRILDEDHYDLDKVKKRILEYLAVRKLNPDGKAPIL 361
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
CFVGPPGVGKTSL SIA A GR F R+SLGGV DEA+IRGHRRTYIG++PG +I +++
Sbjct: 362 CFVGPPGVGKTSLGQSIARATGRPFARLSLGGVHDEAEIRGHRRTYIGALPGNIIQAIRK 421
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
G NPV++LDE+DK G+ GDP+SALLEVLDPEQN+TF D+YL +PFDLSKV+F+ TA
Sbjct: 422 AGARNPVLMLDEMDKLGAGFHGDPSSALLEVLDPEQNRTFRDNYLGLPFDLSKVLFIGTA 481
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PL DRME+I +PGYT +EKL+IA R+LI R LD GL +E I + ++ +
Sbjct: 482 NIPDSIPGPLRDRMEMISVPGYTEDEKLQIAKRYLIKRQLDAAGLKAEQCDISDEALRGI 541
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAG RNLER + AL R AA+++AE KD
Sbjct: 542 IRYYTREAGCRNLEREIGALCRHAAMRIAE---------GKD------------------ 574
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
+ + + EA L +LGP RF+D E A R + PG++ GL
Sbjct: 575 ----------------------TAVKIGEADLPTILGPHRFED-EVAMRTSVPGVATGLA 611
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ F+EA + G G+L LTGQLGDV+KESAQ AL+ V++RA L +
Sbjct: 612 WTPTGGDILFIEAARVPGSGKLILTGQLGDVMKESAQAALSLVKSRAESLGIDPAQ---- 667
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ DIH+H PAGA+PKDGPSAGV + AL SL + + R DTAMTGE++LRGLVLP+GG
Sbjct: 668 FEKSDIHVHVPAGAIPKDGPSAGVAMFIALTSLLTARTARGDTAMTGEISLRGLVLPIGG 727
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VK+K+LAA R GI+ V+LPERN KDL ++P ++ + + ++D + A E
Sbjct: 728 VKEKVLAAVRGGIETVMLPERNRKDLEDIPPDARQRIKFVWMRTVDDAIAAALE 781
>gi|121534153|ref|ZP_01665978.1| ATP-dependent protease La [Thermosinus carboxydivorans Nor1]
gi|121307256|gb|EAX48173.1| ATP-dependent protease La [Thermosinus carboxydivorans Nor1]
Length = 773
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 331/758 (43%), Positives = 474/758 (62%), Gaps = 75/758 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EGL R + + ++ I + + + ++E AL+R
Sbjct: 81 PGG--TIRVLVEGLHRAQILRYTELDPFFQVEIEEFDEIQTKTPEIE------ALTR--- 129
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
TA IS EQ K + + L+ V + +L+D+ + + E++ +L++V
Sbjct: 130 -TA---ISQFEQWVKLSKKIPPETLISVVTVEEPGRLSDLIASHLALKIEDKQALLEAVG 185
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
K RL K E++ R ++ + + +KI +V Q+ K+QKE+ LR+Q++AI++ELG+ DD
Sbjct: 186 YKERLEKLCEILGREMEILELEKKINVRVRKQMEKTQKEYYLREQLKAIQKELGEKDDRL 245
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ ++++ +P + + + KE+ RL+KM P R YL+ + LPW K +
Sbjct: 246 AEADEYRQRLKELDIPKEVAEKINKEIERLEKMPPMAAESAVIRTYLDWLLALPWTKETT 305
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD+ A++ LD DHYGL +VK+RI+EYL+VRKL +GP+LC VGPPGVGKTSLA
Sbjct: 306 D-RLDIAVAEKILDEDHYGLQKVKERILEYLSVRKLTETMKGPILCLVGPPGVGKTSLAR 364
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A+ RKF+R+SLGGV+DEA+IRGHRRTY+G++PGR+I G++ VG NPV LLDEIDK
Sbjct: 365 SIARAMERKFVRVSLGGVRDEAEIRGHRRTYVGALPGRIIQGMRTVGSKNPVFLLDEIDK 424
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
+D RGDP++ALLEVLDPEQN TF+DHY+ VPFDLS+V++V TAN IP PLLDRME
Sbjct: 425 MSADFRGDPSAALLEVLDPEQNNTFSDHYIEVPFDLSRVLWVVTANVMHNIPRPLLDRME 484
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI +PGYT EEK++IA R+LIP+ HGL + E ++ VI+ YTREAGVRNLER
Sbjct: 485 VISIPGYTEEEKVQIAKRYLIPKQTRDHGLSEGQIIFSEGTIQKVIRDYTREAGVRNLER 544
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
N+A L R AA ++ ++++ +++++H
Sbjct: 545 NIAGLCRKAARQIVQEQRTAVKITAQNLH------------------------------- 573
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
TF LG P++ + AE+ G++ GL WT GG+V E +
Sbjct: 574 --TF----------------LGAPKYRHAQ-AEKSPQVGVATGLAWTEVGGDVLAAEVSI 614
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
M+GKG+L LTGQLG+V++ESAQ T++R RA +L + E + DIHIH P GA+
Sbjct: 615 MKGKGKLTLTGQLGEVMRESAQAGFTYIRTRAKELGIDEE----FHEKTDIHIHLPEGAI 670
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+T+ TA+ S + + VR+D AMTGE+TLRG VLPVGG+K+K+LAAHR GIK+
Sbjct: 671 PKDGPSAGITMATAVASALTGQPVRSDLAMTGEITLRGRVLPVGGIKEKVLAAHRAGIKK 730
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
VILP+ N +DL E+PA V SLE I + M++VL A
Sbjct: 731 VILPQENRRDLEEIPANVKRSLEFIFVEHMDEVLRAAL 768
>gi|386391159|ref|ZP_10075940.1| ATP-dependent protease La [Desulfovibrio sp. U5L]
gi|385732037|gb|EIG52235.1| ATP-dependent protease La [Desulfovibrio sp. U5L]
Length = 841
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 331/756 (43%), Positives = 479/756 (63%), Gaps = 65/756 (8%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFI 116
+ R ++ P GR+ V+++GL R V+ + ++ A++ + + + +EQ+
Sbjct: 111 IMRMLKMPDGRLK--VLVQGLTRARVEHFISSEPFHLAKVEIIGERESKEVTLEQE---- 164
Query: 117 ALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
A+ R + + +++S+ + + VL +LAD+ ++ + EE +L+
Sbjct: 165 AMMRAAREQSEKILSL--RGMASADIMAVLNSVNEPGRLADLVASNLRMRVEEAQRLLEC 222
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
D RL + + + + + KI + + K+QK+F LR+QM+AI+ ELG+ +
Sbjct: 223 EDPIERLRLVNDQLVKEAEVATMQAKIQNMAKEGMDKAQKDFFLREQMKAIRRELGEGGE 282
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+ D+L L+ + GMP + K K+L+RL M P R YL+ + DLPW+K
Sbjct: 283 ESDELEELKEALDKVGMPKEVKKESDKQLKRLVSMHPDSSEAGVIRTYLDWLVDLPWKKL 342
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
S++ LD+K AK LD DH+ L +VK+RI+EYL+VRKL P +GP+LCFVGPPGVGKTSL
Sbjct: 343 SKD-RLDIKEAKRILDEDHFDLEKVKERILEYLSVRKLNPGMKGPILCFVGPPGVGKTSL 401
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
SIA ALGRKF+R+SLGG++DEA+IRGHRRTYIGSMPGR++ +K+ G NPV++LDEI
Sbjct: 402 GRSIARALGRKFVRMSLGGMRDEAEIRGHRRTYIGSMPGRVVQSIKQAGTRNPVIMLDEI 461
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK GSD RGDP+SALLEVLDPEQN +F+DHYLNVPFDLSKV+F+ TAN IP PLLDR
Sbjct: 462 DKVGSDFRGDPSSALLEVLDPEQNFSFSDHYLNVPFDLSKVMFICTANILDTIPAPLLDR 521
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
ME+I LPGYT +EK++IA R+++PR ++++GL + + + ++ +I+ YTREAG+RNL
Sbjct: 522 MELIRLPGYTEQEKIKIARRYILPRQIEENGLAKNDMILSDQVLARIIRDYTREAGLRNL 581
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER + ++AR A K AE E+
Sbjct: 582 EREVGSVARKVARKKAEGEKP--------------------------------------- 602
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRF-DDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
FR+T+ A LEK+LGP + DD AE PG++VGL WT GG + +E
Sbjct: 603 ----PFRVTA------ASLEKLLGPAYYMDDEREAE--LPPGVAVGLAWTPVGGAILHIE 650
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ GKG L LTG+LGDV+KESAQ ALT+ ++RA +L + E + + DIHIH PA
Sbjct: 651 VATLPGKGGLQLTGKLGDVMKESAQAALTYAKSRAKELGINPE----IFEKNDIHIHVPA 706
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAGVTLVTAL+S + +RV +D AMTGE+TLRG VLPVGG+K+K+LAA G
Sbjct: 707 GATPKDGPSAGVTLVTALISALTNQRVGSDVAMTGEITLRGRVLPVGGIKEKVLAAVAAG 766
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+KR+I+P +N+KDL ++P + +++ +R+++V
Sbjct: 767 MKRIIIPAQNMKDLRDIPRDLRGRVKVFPVERIDEV 802
>gi|74219798|dbj|BAE40488.1| unnamed protein product [Mus musculus]
Length = 710
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 299/547 (54%), Positives = 401/547 (73%), Gaps = 20/547 (3%)
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
L+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLAVR+LK + +GP+LCFV
Sbjct: 174 LLDNLPWNKSTTD-RLDIRAARILLDNDHYAMEKLKRRVLEYLAVRQLKNNLKGPILCFV 232
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV
Sbjct: 233 GPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGV 292
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV FDLS+V+F+ATAN
Sbjct: 293 NNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTT 352
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL + +QIP+ +I R
Sbjct: 353 ATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQHTTLAIITR 412
Query: 527 YTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEM 586
YTREAGVR+L+R A+ RA AVKVAE + ++A DV ADG +
Sbjct: 413 YTREAGVRSLDRKFGAICRAVAVKVAEGQHKEAKLDRSDV------------ADGEGCKE 460
Query: 587 EVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGL 642
V+ + +S+T + P+++D L+ +LGPP + + E +ER++ PG+++GL
Sbjct: 461 HVLEDAKP-ESISDTADLALPPEMPILIDSHALKDILGPPLY-ELEVSERLSQPGVAIGL 518
Query: 643 VWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-M 701
WT GG++ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R+ A L G
Sbjct: 519 AWTPLGGKIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYHLTNAFGSF 578
Query: 702 NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPV 761
+LL DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPV
Sbjct: 579 DLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPV 638
Query: 762 GGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
GG+KDK+LAAHR G+K++I+P+RN KDL E+P+ V L + A +++VL AF+GG P
Sbjct: 639 GGIKDKVLAAHRAGLKQIIIPQRNEKDLEEIPSNVRQDLSFVTASCLDEVLNAAFDGGFP 698
Query: 822 WRQHSKL 828
+ L
Sbjct: 699 VKTRPGL 705
>gi|389578256|ref|ZP_10168283.1| ATP-dependent protease La [Desulfobacter postgatei 2ac9]
gi|389399891|gb|EIM62113.1| ATP-dependent protease La [Desulfobacter postgatei 2ac9]
Length = 783
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 328/755 (43%), Positives = 457/755 (60%), Gaps = 80/755 (10%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ---------VEQDPDFIALSRQF 122
++++GL RF V E + Y A IS L+ + + VEQ + LS
Sbjct: 100 LLIQGLNRFKVVEFLKKRDYMHAAISVLKSRNNDRNKENRALMANIVEQYEKIVKLSPGL 159
Query: 123 KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
A +++ LE+ LAD+ ++ E+ +L+ +D+ R
Sbjct: 160 PAEIGQMVKTLEEPSA----------------LADMVASTINAPVNEKQKVLELIDVNRR 203
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L K T LV+ L + + KI +V + K Q+E+ LRQQ++AIKEELG+ND + +L
Sbjct: 204 LKKVTRLVNDQLDILEMGSKIQNQVREDMDKRQREYYLRQQLKAIKEELGENDQEAVELR 263
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
+ +++ MP K ++EL RL +M P Y S YL+ + LPW K +++ L
Sbjct: 264 EYKTLIRNNSMPEEATKEAERELDRLARMHPSSSEYVVSSTYLDWLTSLPWNKYAQD-RL 322
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
D+ A++ LD DHYGL + K+RI+E+LAVRKLK D++GP+LCF GPPG GKTSL SIA
Sbjct: 323 DIAKARKILDQDHYGLEKPKKRILEFLAVRKLKKDSKGPILCFAGPPGTGKTSLGKSIAR 382
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
ALGRKF+RI+LGGV+DEA+IRGHRRTY+G+MPGR+I L+ G NPV +LDEIDK S
Sbjct: 383 ALGRKFVRIALGGVRDEAEIRGHRRTYVGAMPGRIIQQLRTAGNKNPVFMLDEIDKVSSS 442
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
GDP+SALLEVLDPEQN+ F DHYL+VPFDLS V+F+ TAN IPPPL DRMEV+EL
Sbjct: 443 YHGDPSSALLEVLDPEQNQHFVDHYLDVPFDLSDVMFLTTANVLHTIPPPLRDRMEVLEL 502
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GYT EEKL+IA R++IP+ + +G+ S ++I +K +I YTRE+G+RNLER + A
Sbjct: 503 TGYTQEEKLKIAGRYIIPKQREANGINSGQIKITPGAIKQIISGYTRESGLRNLERQIGA 562
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
+ R A K+ E + E
Sbjct: 563 VCRGVAAKIVEDQVEN-------------------------------------------- 578
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
L + + + + LGP + + + A R+ PG++VGL WT GGEV FVEA AM+G
Sbjct: 579 -----LTIGQKEIAEYLGPVQ-NMPDMATRINTPGVAVGLAWTPVGGEVLFVEAVAMKGG 632
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
L LTGQLGD++KESA AL+++R+ TD +L +D DIHIH P G++PKDG
Sbjct: 633 KGLTLTGQLGDIMKESASTALSFIRSN-TD-RLAVDD--TFFDTHDIHIHVPEGSIPKDG 688
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAGVT++T L SL ++++V++ AMTGE+TLRG VLPVGG+KDK++AAHR GI+ +ILP
Sbjct: 689 PSAGVTMLTTLASLITKRKVKSRMAMTGEITLRGEVLPVGGIKDKVIAAHRAGIRSLILP 748
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
N KD+ +VP + +++ +M DVL A E
Sbjct: 749 LWNEKDMEDVPEHIKSTMTFYFTDKMTDVLNTALE 783
>gi|148554068|ref|YP_001261650.1| ATP-dependent protease La [Sphingomonas wittichii RW1]
gi|148499258|gb|ABQ67512.1| ATP-dependent protease La [Sphingomonas wittichii RW1]
Length = 801
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 336/772 (43%), Positives = 471/772 (61%), Gaps = 68/772 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G A L G ++ T+ ++++G RF V E + ARI +E E
Sbjct: 89 HRTGTIANVLRYITGPDE-----THHLIVQGESRFRVVEFLDGWPFLVARIERIEEPAPE 143
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
+VE FI L Q A+E +S+L Q + G + LAD+ A +I
Sbjct: 144 GTEVEAR--FINLRNQ----ALETVSLLPQAPQ--GLADAIRTIAAPGALADLTAAYLDI 195
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
+++ +L+++ L+ RL K L+ + L+ +R++ +I + V+ +L Q+E LLR+QM
Sbjct: 196 GADDKQGILETIALQPRLDKVMALLAQRLEVLRLSAEIGKGVQEKLGTRQREHLLREQMA 255
Query: 226 AIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYL 285
I+ +LG++D + ++ L + AGMP + K KELRRL++M + R YL
Sbjct: 256 EIQRQLGEDDGNSAEIAELREAIAKAGMPEEVEKQATKELRRLERMPDGAAEHGIIRTYL 315
Query: 286 ELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCF 345
+ + +LPW E ++D+ A+ +LD+DHYGL ++K RIIEYLAVRKL P+ + P+LCF
Sbjct: 316 DWLTELPW-MLPEHKEIDIAQARAQLDADHYGLEKIKTRIIEYLAVRKLAPEGKAPILCF 374
Query: 346 VGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVG 405
GPPGVGKTSL SIA A+GR+F+R+SLGGV DEA+IRGHRRTYIG++PG +I +++ G
Sbjct: 375 AGPPGVGKTSLGQSIAKAMGREFVRVSLGGVHDEAEIRGHRRTYIGALPGNIIQAIRKAG 434
Query: 406 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 465
+ VM+LDEIDK G ++GDP++A+LEVLDPEQN TF D+YL VPFDLS+V+F+ATAN
Sbjct: 435 TRDCVMMLDEIDKLGRGIQGDPSAAMLEVLDPEQNGTFRDNYLGVPFDLSRVLFIATANM 494
Query: 466 AQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQ 525
IP PL DRMEVI LPGYT EEKL IA R+L+ R L +G+ ++I +A +K +I
Sbjct: 495 LDTIPGPLRDRMEVISLPGYTEEEKLHIARRYLVGRQLGANGVSEAQVEIDDAALKAIIS 554
Query: 526 RYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVE 585
YTREAGVRNLER + + R AAV++AE
Sbjct: 555 YYTREAGVRNLEREIGKVIRHAAVRIAE-------------------------------- 582
Query: 586 MEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWT 645
G +TH + + EA + +VLG F+D E +R + PG+S GL WT
Sbjct: 583 ------GSATH-----------VAIGEADVTEVLGGRIFED-ETVQRTSVPGVSTGLAWT 624
Query: 646 NFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQ 705
GG + F+EAT M G G L LTGQLGDV+KESAQ AL+ V++RA L + +
Sbjct: 625 PVGGSILFIEATKMPGNGRLILTGQLGDVMKESAQAALSLVKSRAATLGIDTAS----FE 680
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
DIH+H PAGA PKDGPSAGV + AL SL + + VR+DTAMTGE++LRGLVLPVGG+K
Sbjct: 681 RSDIHVHVPAGATPKDGPSAGVAMYLALTSLLTGRTVRSDTAMTGEISLRGLVLPVGGIK 740
Query: 766 DKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K++AA G+ RV+LP RN +D ++PA LE + + +ED LE +
Sbjct: 741 EKVVAAAGAGVTRVMLPARNRRDYDDIPANAREKLEFVWLETVEDALEHGLD 792
>gi|302390300|ref|YP_003826121.1| ATP-dependent proteinase [Thermosediminibacter oceani DSM 16646]
gi|302200928|gb|ADL08498.1| ATP-dependent proteinase [Thermosediminibacter oceani DSM 16646]
Length = 796
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 331/758 (43%), Positives = 468/758 (61%), Gaps = 80/758 (10%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQD---------PDFIALS 119
T V++EGL R ++QE ++ ++ + +E E+ +++ L+
Sbjct: 86 TIRVLVEGLHRATIQEYIQCEPFFKVKVEEIVEDDVEAGPEEEALMRGVMSLFENYVNLN 145
Query: 120 RQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDL 179
R+ A LIS+ +Q GR AD + + E++ ++L+++++
Sbjct: 146 RKINPDA--LISIGNMRQP--GR------------FADTIASYLNLKIEDKQLILETLNI 189
Query: 180 KVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDED 239
K RLS E + R ++ + + ++I +V+ QL KSQKE+ LR+Q+RAI++ELG+ D+
Sbjct: 190 KDRLSFLFETLTREIEILELEKRINNRVKKQLEKSQKEYYLREQIRAIQQELGEQDERVA 249
Query: 240 DLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEE 299
+ K+++ +P ++ + + KE+ RL++ P R YL+ I LPW A+E+
Sbjct: 250 EANEYRDKIKALNLPKDLEEKMMKEVDRLERTPPASAEMAVIRNYLDWIVALPWNTATED 309
Query: 300 IDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASS 359
+ LD+K+A+ LD HYGL +VK+RI+E+LAVRKL + P+LC GPPGVGKTSLA S
Sbjct: 310 L-LDIKSAQAILDEGHYGLEKVKERILEFLAVRKLAESTKAPILCLAGPPGVGKTSLARS 368
Query: 360 IASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKT 419
IA A+GRKF+R+SLGGV+DEA+IRGHRRTY+G++PGR+I G+K+ G NPV LLDEIDK
Sbjct: 369 IAKAMGRKFVRVSLGGVRDEAEIRGHRRTYVGALPGRIIQGMKQAGTKNPVFLLDEIDKM 428
Query: 420 GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEV 479
SD RGDPA+ALLEVLDPEQN +F+DHY+ +PFDLSKV+F+ TAN IP PLLDRMEV
Sbjct: 429 SSDFRGDPAAALLEVLDPEQNHSFSDHYIELPFDLSKVLFITTANTLYNIPRPLLDRMEV 488
Query: 480 IELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERN 539
I +PGYT EKL+IA HLIPR + +HGL E L + V +I+ YTREAGVRNLER
Sbjct: 489 ISIPGYTEYEKLQIAKLHLIPRQIREHGLKPENLAFLDEAVIKIIRNYTREAGVRNLERE 548
Query: 540 LAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVS 599
+A++ R A V E E+
Sbjct: 549 IASICRKVARSVVEGEK------------------------------------------- 565
Query: 600 NTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAM 659
+ + VD +M+E LG PRF E G++ GL WT GG++ +EAT M
Sbjct: 566 ------TTVEVDGSMVENFLGVPRFH-YGVIEETDQVGVATGLAWTEMGGDILNIEATVM 618
Query: 660 RGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVP 719
+GKG+L LTG+LGDV++ESA T+VR++A +L + ED + D+HIH P GA+P
Sbjct: 619 KGKGKLILTGKLGDVMQESAHAGYTYVRSKAEELG-IEED---FHEKYDVHIHVPEGAIP 674
Query: 720 KDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRV 779
KDGPSAG+T+ AL+S S + V AMTGE+TLRG VLPVGG+K+K+LAAHR GIK +
Sbjct: 675 KDGPSAGITMACALISALSGQPVDRTVAMTGEITLRGRVLPVGGIKEKVLAAHRAGIKTI 734
Query: 780 ILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
ILPE N+KDL EVP V L I + M++V+E+A +
Sbjct: 735 ILPEENIKDLEEVPQNVKQELCFIFVRTMDEVIEKALK 772
>gi|297570186|ref|YP_003691530.1| ATP-dependent protease La [Desulfurivibrio alkaliphilus AHT2]
gi|296926101|gb|ADH86911.1| ATP-dependent protease La [Desulfurivibrio alkaliphilus AHT2]
Length = 790
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 319/663 (48%), Positives = 421/663 (63%), Gaps = 54/663 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ V++ ++ E +L+ +D RL K E + + L+ V +I + + ++ +
Sbjct: 181 RLADLVVSNLQLKVVESQAVLELLDPVARLRKVAEYLQKELEVSTVQARIQSEAKEEMGR 240
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ LR+Q++A+K+ELGD D+ +L L + P + K K+L+RL+ M P
Sbjct: 241 SQREYFLREQLQALKKELGDVDERSQELEELRERFNKGSFPKEVKKEGLKQLKRLETMHP 300
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
+ R YL+ + D+PW K+S++ LDLK A E LD+DHYGL +VK+RI+EYLAVRK
Sbjct: 301 DASEASIVRTYLDWLLDVPWRKSSKD-RLDLKVAHEVLDADHYGLEKVKERILEYLAVRK 359
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L ++GP+LCFVGPPGVGKTSL SIA ALGRKF RISLGG++DEA+IRGHRRTYIG+M
Sbjct: 360 LNKASKGPILCFVGPPGVGKTSLGQSIARALGRKFHRISLGGMRDEAEIRGHRRTYIGAM 419
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I GLK V NPV ++DEIDK G+D RGDP+SALLEVLDP QN F+DHYLN+P D
Sbjct: 420 PGRIIQGLKTVESNNPVFMMDEIDKVGTDYRGDPSSALLEVLDPAQNTEFSDHYLNLPCD 479
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+F+ TAN IP LLDRMEVI L GYT EEK+ IA R+LIPR + ++GL +
Sbjct: 480 LSKVMFITTANMTDTIPAALLDRMEVIRLAGYTHEEKVEIAKRYLIPRQIKENGLKPSQV 539
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ EA + +I YTREAG+RNLER + AL R A K+AE
Sbjct: 540 KFAEAAISRLITHYTREAGLRNLEREIGALCRKVARKIAEG------------------- 580
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
G+ + +S L LGP R+ +E +
Sbjct: 581 ------------------GKGPYSISTR------------TLHGYLGPARYLPEAESEMI 610
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
PGIS GL WT GGE+ +VE + M+G+G L LTGQLG+V+KESAQ AL++ R+R +L
Sbjct: 611 DRPGISTGLAWTEVGGEILYVEVSLMKGRGNLTLTGQLGEVMKESAQAALSYCRSRRKEL 670
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+L N DIHIH PAGA+PKDGPSAGVT+ TAL S S K VR D AMTGE+T
Sbjct: 671 KLEE----NYFDDLDIHIHVPAGAIPKDGPSAGVTMATALYSALSGKTVRPDVAMTGEIT 726
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K LAA R GI V++P N KDL E+P + L + K ME +L+
Sbjct: 727 LRGRVLPIGGLKEKALAALRAGITTVVIPHHNKKDLEEIPKDLREKLTFVPVKNMEQILK 786
Query: 814 QAF 816
F
Sbjct: 787 MIF 789
>gi|337287208|ref|YP_004626681.1| ATP-dependent protease La [Thermodesulfatator indicus DSM 15286]
gi|335360036|gb|AEH45717.1| ATP-dependent protease La [Thermodesulfatator indicus DSM 15286]
Length = 800
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 349/786 (44%), Positives = 470/786 (59%), Gaps = 77/786 (9%)
Query: 35 DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTA 94
D ++V H V R L LS K V+++ + R V E Y+
Sbjct: 75 DEPTPEDVYHTGVVAVIMRTLKLSDDRLK--------VLVQAVARAKVSEFVQTKPYFQV 126
Query: 95 RISSL---EMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVP 151
+I L E KI++E AL R+ K T E I VL + Q T L
Sbjct: 127 KIELLRDEEPKKIDVEAE-------ALIREIKETT-EKIFVL-KNQLTPELNTALDSIES 177
Query: 152 IHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQL 211
+LAD + + E +L+ D RL K + R L+ V KI + + ++
Sbjct: 178 PGRLADFVASHLRLKTNEAQEILEISDALERLRKLYHYLLRELEVATVQAKIQTQAQEEM 237
Query: 212 SKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKM 271
S++Q+E+ LR+Q+RAIK ELG+ D+ ++ + +++ A MP + K K+LRRL+ M
Sbjct: 238 SRTQREYFLREQLRAIKRELGEVDEHSREIEEFKARIEKARMPKEVEKEALKQLRRLEMM 297
Query: 272 QPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAV 331
P T R YLE + +LPW K +++ LDLK AKE LD DHY L +VK RI+EYLAV
Sbjct: 298 HPDSAEATIVRTYLEWLTELPWRKQTKD-KLDLKRAKEILDEDHYNLEKVKDRILEYLAV 356
Query: 332 RKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIG 391
RKL P A+GP+LCFVGPPGVGKTSL SIA ALGRKF+RISLGGV+DEA+IRGHRRTYIG
Sbjct: 357 RKLNPKAKGPILCFVGPPGVGKTSLGRSIARALGRKFVRISLGGVRDEAEIRGHRRTYIG 416
Query: 392 SMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP 451
SMPGR+I GLK+ G NPV ++DE+DK +D +GDP++ALLEVLDPEQN +F DHYL VP
Sbjct: 417 SMPGRIIQGLKQAGTNNPVFMIDEVDKLCADFQGDPSAALLEVLDPEQNTSFVDHYLGVP 476
Query: 452 FDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSE 511
FDLSKV+F+ TAN PIPP L DRME+I + GYT EEKL I R+L+PR L +HGL E
Sbjct: 477 FDLSKVMFICTANMTDPIPPALRDRMEIIYISGYTAEEKLVITKRYLLPRQLKEHGLKPE 536
Query: 512 FLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LG 570
+QI + + +I YT EAG+R LER +AA+ R A ++AE ++ + +++H+ LG
Sbjct: 537 DIQISDETILKIINEYTEEAGLRELERKIAAICRKIARRLAEGDKGPFRVNRQNLHKYLG 596
Query: 571 SPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAA 630
P + +E+E E +G
Sbjct: 597 PP------SYVSELEQEKDEIG-------------------------------------- 612
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARA 690
++ GL WT GGEV +VE M GKG L LTGQLG++++ESAQ AL++ RA+A
Sbjct: 613 -------VATGLAWTQAGGEVLYVEVLVMEGKGNLILTGQLGEIMRESAQAALSYTRAKA 665
Query: 691 TDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTG 750
+ + N + D+HIH PAGA+PKDGPSAGVT+VTA++S + V D AMTG
Sbjct: 666 KEWGI----PKNFYEKYDVHIHLPAGAIPKDGPSAGVTIVTAMISALAEIPVSKDVAMTG 721
Query: 751 EMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMED 810
E+TLRG VLPVGG+K+K LAA R GI++VI+PE+NLKDL E+P + +E I + ++
Sbjct: 722 EITLRGKVLPVGGIKEKSLAALRKGIRKVIIPEKNLKDLEEIPKHMRRKIEFIPVRHVDQ 781
Query: 811 VLEQAF 816
VLE A
Sbjct: 782 VLEVAL 787
>gi|333977880|ref|YP_004515825.1| anti-sigma H sporulation factor LonB [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333821361|gb|AEG14024.1| anti-sigma H sporulation factor, LonB [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 811
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 335/759 (44%), Positives = 466/759 (61%), Gaps = 77/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EGL R ++ ++ K+E+EQ +D FI + + +
Sbjct: 81 PGG--TIRVLVEGLARGHIRRYLAYEPFF----------KVEVEQYNED--FIK-TPEIE 125
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
A L+ EQ K R + ++ V + +LADI + + EE+ +L++VD
Sbjct: 126 ALMRSLVYQFEQYVKLSKRIPPETVVSVVNLEEPGRLADIVASHLPLRIEEKQQVLEAVD 185
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL K LV R L+ + + KI +V Q+ K+QKE+ LR+QM+AI+ ELG+ D+
Sbjct: 186 IVKRLEKLCALVARELEIVELERKINIRVRKQMEKTQKEYYLREQMKAIQRELGEKDERV 245
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ K+ A +P + + KE+ RL+KM P R YL+ + LPW K++
Sbjct: 246 AEGEEYREKIAEAKLPKEVEEKALKEVERLEKMPPMAAESAVIRNYLDWLLALPWSKSTR 305
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD+KAA+ L+ DHYGL VK+RI+EYLA+RKL +GP+LCFVGPPGVGKTSL
Sbjct: 306 D-RLDIKAAEAILEEDHYGLTEVKERILEYLAIRKLNKKMKGPILCFVGPPGVGKTSLGR 364
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA AL RKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I G++ G NPV LLDEIDK
Sbjct: 365 SIARALERKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGMRNAGSKNPVFLLDEIDK 424
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
D RGDP++ALLEVLDPEQN +F+DHY+ VPFDLS V+F+ TAN IP PLLDRME
Sbjct: 425 MSMDFRGDPSAALLEVLDPEQNNSFSDHYIEVPFDLSNVMFITTANVQHSIPRPLLDRME 484
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI++ GYT EEK++IA+RHL+P+ L +HGL E I E ++ VI+ YTRE+GVRNLER
Sbjct: 485 VIQISGYTEEEKVQIALRHLLPKQLKEHGLTREMFSISEKAIRRVIREYTRESGVRNLER 544
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDV-HRLGSPLLDNRLADGAEVEMEVIPMGESTHE 597
+A L R AA ++ +E ++ + +++ H LG+P
Sbjct: 545 QIATLCRKAARQIVAEETKKVRVTVQNLEHFLGTP------------------------- 579
Query: 598 VSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEAT 657
FR AE+ G++ GL WT GG+ +E T
Sbjct: 580 ---KFRYG-----------------------VAEQEDQVGVATGLAWTEVGGDTLAIEVT 613
Query: 658 AMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGA 717
RG G L LTG+LG+V+KESAQ + ++VR+RA L + E + DIHIH P GA
Sbjct: 614 VYRGTGRLTLTGKLGEVMKESAQASYSYVRSRAGQLGIDEE----VFDKHDIHIHVPEGA 669
Query: 718 VPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIK 777
+PKDGPSAG+T+ AL S F+ ++VR D AMTGE+TLRG VLPVGG+K+K+LAAHR GI
Sbjct: 670 IPKDGPSAGITMACALASAFTGRKVRHDVAMTGEITLRGRVLPVGGIKEKVLAAHRAGIT 729
Query: 778 RVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
VILP+ N K+L ++P+ V + ++ I + M++VLE A
Sbjct: 730 TVILPKDNRKELDDIPSNVRSKMQFIQVEHMDEVLEIAL 768
>gi|334339589|ref|YP_004544569.1| ATP-dependent protease La [Desulfotomaculum ruminis DSM 2154]
gi|334090943|gb|AEG59283.1| ATP-dependent protease La [Desulfotomaculum ruminis DSM 2154]
Length = 810
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 329/753 (43%), Positives = 462/753 (61%), Gaps = 75/753 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EG+ R ++ Y+ K+E++Q ++ S + +
Sbjct: 81 PGG--TIRVLVEGIARAKIRTYEGLEPYF----------KVEIDQYSEE---FEKSSEIE 125
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
A L+ EQ K R + ++ V + +LADI + + E++ +L+S+D
Sbjct: 126 ALMRSLVYQFEQYVKLSKRIPPETVVSVVNLEEPGRLADIIASHLALRIEDKQKVLESID 185
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL K +V + L+ + + KI +V Q+ K+QKE+ LR+QM+AI++ELG+ D+
Sbjct: 186 IVERLEKLCSIVAKELEIVELERKINIRVRKQMEKTQKEYYLREQMKAIQKELGEKDERV 245
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ L K+ A +P + + KE+ RL+KM P T R YL+ + LPW K++
Sbjct: 246 AECEELREKIAKAKLPKEVEEKAIKEVERLEKMPPMAAEATVVRNYLDWVLSLPWSKSTR 305
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ L++KAA++ LD DHYGL K+RIIEYLA+RKL +GP+LC VGPPGVGKTSL
Sbjct: 306 D-RLEIKAAEQILDDDHYGLKNPKERIIEYLAIRKLAKKMKGPILCLVGPPGVGKTSLGR 364
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA AL RKFIRISLGGV+DEA+IRGHRRTY+G+MPGR+I G+++ G NPV LLDEIDK
Sbjct: 365 SIARALERKFIRISLGGVRDEAEIRGHRRTYVGAMPGRVIQGMRQAGSKNPVFLLDEIDK 424
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
SD RGDPASALLEVLDPEQN TF+DHY+ FDLS V+F+ TAN IP PLLDRME
Sbjct: 425 MASDFRGDPASALLEVLDPEQNSTFSDHYIESSFDLSNVMFITTANNMWSIPRPLLDRME 484
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI++ GYT EEKL IA RHL+P+ + +HGL ++ L + E ++ +I+ YTRE+GVR+LER
Sbjct: 485 VIQISGYTEEEKLEIAKRHLLPKQIKEHGLTADMLSLSETAMRKMIREYTRESGVRSLER 544
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
NLA+L R A ++ +E
Sbjct: 545 NLASLCRKTAKRIVAKE------------------------------------------- 561
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
+ +IT+ LE+ LG PR+ AE+ GI G+ WT GG+ +E T
Sbjct: 562 ATKVKITA------QNLEQFLGVPRY-RYGVAEQYDEVGIVTGMAWTEVGGDTLVIEVTT 614
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+G G + LTG+LGDV+KESAQ ++VR+RA +L++ E L + D+HIH P GA+
Sbjct: 615 YKGNGRMTLTGKLGDVMKESAQAGYSYVRSRAGELEIPGE----LFEKYDMHIHIPEGAI 670
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+T+ TA+ S+ + ++VR D AMTGE+TLRG VLPVGG+K+K++AAHR GIK
Sbjct: 671 PKDGPSAGITMATAIASVLTGRKVRHDVAMTGEITLRGRVLPVGGIKEKVMAAHRAGIKM 730
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+I+P N KDL ++P + LE L M+ V
Sbjct: 731 IIMPLDNKKDLEDIPGNIRKQLEFKLVDHMDQV 763
>gi|320352983|ref|YP_004194322.1| ATP-dependent proteinase [Desulfobulbus propionicus DSM 2032]
gi|320121485|gb|ADW17031.1| ATP-dependent proteinase [Desulfobulbus propionicus DSM 2032]
Length = 809
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 336/766 (43%), Positives = 472/766 (61%), Gaps = 84/766 (10%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSL------EMTKIEMEQV--- 109
R ++ P GR+ V+++ L + V+ R +Y I + E+T +E E +
Sbjct: 95 RTLKLPDGRLK--VLVQALSKARVRSYQQRKPFYRVEIDLIDEPETPEIT-VETEALMRT 151
Query: 110 --EQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISF 167
EQ ++L + M +I+ +E+ GR LAD+ ++ +
Sbjct: 152 VREQTEKIMSLRGILSSDLMMIINNIEEP----GR------------LADLVGSNLRLKI 195
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
E +L+++D RL +L+ + L+ V KI + ++S+SQ+E+ LR+Q++A+
Sbjct: 196 SESQKILETIDPIERLRLVADLLHKELEVSTVQAKIQSDAKEEMSRSQREYFLREQIQAL 255
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
K ELGD D ++ L ++++ MP K +K+LRRL+ M P T R YL+
Sbjct: 256 KRELGDEDSYSQEIEELSKQLRKKKMPKYAKKEARKQLRRLEMMHPDASEATIVRTYLDW 315
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
DLPW+++S+++ LDLK A E LD DHYGL R+K+RI+EYLAVRKL D +GP++CFVG
Sbjct: 316 FLDLPWKESSKDV-LDLKVAAEVLDEDHYGLDRIKERILEYLAVRKLNADTKGPIICFVG 374
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL +IA A+GRKF R+SLGG++DEA+IRGHRRTYIG++PGR++ GLK VG
Sbjct: 375 PPGVGKTSLGQAIAKAMGRKFYRLSLGGMRDEAEIRGHRRTYIGALPGRILQGLKSVGTN 434
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV ++DEIDK G D RGDP+SALLEVLDPEQN TF+DHY+N+PFDLSKV+F+ TANR+
Sbjct: 435 NPVFMMDEIDKIGDDYRGDPSSALLEVLDPEQNNTFSDHYMNLPFDLSKVMFITTANRSD 494
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
IP PLLDRMEVI+L GYT EEK+ IA ++L+PR + ++G+ ++I ++++I RY
Sbjct: 495 TIPGPLLDRMEVIQLSGYTLEEKMVIANKYLLPRQIKENGIKPTQIKIDNPTLEIIISRY 554
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
T EAGVRNLER L + R A KVAE
Sbjct: 555 THEAGVRNLERALGKVCRKIARKVAEG--------------------------------- 581
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
G+ + +S E +EK LGPP+F + + PG+ +GL WT
Sbjct: 582 ----GKGPYVIS------------ENTVEKYLGPPKFLPEKDLDTSGQPGLVIGLAWTEV 625
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGR 707
GGE+ +E + + GKG+L LTGQLG+V+KESAQ AL++ R+R +L + E
Sbjct: 626 GGELLHIETSVLPGKGKLLLTGQLGEVMKESAQAALSYCRSRNKELGVEPE----YFDSV 681
Query: 708 DIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDK 767
DIHIH PAGA+PKDGPSAG+T+ TAL S S K V+ AMTGE+TLRG VLP+GG+KDK
Sbjct: 682 DIHIHVPAGAIPKDGPSAGITMTTALFSAISGKAVKRGIAMTGEVTLRGRVLPIGGLKDK 741
Query: 768 ILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LAA R GI ++I+PE N KDLVE+P + + K M++V+E
Sbjct: 742 ALAALRAGIGKIIIPEENQKDLVEIPEELRKKITFHPVKHMDEVIE 787
>gi|258516484|ref|YP_003192706.1| ATP-dependent protease La [Desulfotomaculum acetoxidans DSM 771]
gi|257780189|gb|ACV64083.1| ATP-dependent protease La [Desulfotomaculum acetoxidans DSM 771]
Length = 806
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 332/758 (43%), Positives = 468/758 (61%), Gaps = 74/758 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EG+ R V + ++ ++E+E+++ D + + +
Sbjct: 81 PGG--TIRVLVEGISRGRVLNYTANEPFF----------RVEIEELK---DLTVKTAEIE 125
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
A L+ EQ K R + ++ V + +LADI + + +++ V+L+SV
Sbjct: 126 ALMRSLVYQFEQYVKLSKRIPPETVVSVVNLEEPGRLADIIASHMNLKVDDRQVILESVG 185
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL K +V R L+ + + KI +V Q+ K+QKE+ LR+Q++AI++ELG+ D+
Sbjct: 186 MVERLEKLCAMVVRELEIVELERKINVRVRKQMEKTQKEYYLREQIKAIQKELGEKDERV 245
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ L K+ A +P + + V KEL RL+KM R YL+ + LPW K ++
Sbjct: 246 AECEELREKIAKAKLPKAVEEKVMKELERLEKMPQMAAEAVVVRNYLDTLLALPWSKTTK 305
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LDLK A++ LD DHYGL +VK RI+EYLA+RKL +GP++CFVGPPGVGKTSL
Sbjct: 306 D-RLDLKIAEQILDEDHYGLKKVKDRILEYLAIRKLAKKMKGPIICFVGPPGVGKTSLGK 364
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA AL RKF R+SLGGV+DEA+IRGHRRTY+G+MPGR+I G+K+VG NPV LLDEIDK
Sbjct: 365 SIARALERKFYRMSLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKQVGTKNPVFLLDEIDK 424
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
D RGDP+SALLEVLDPEQN F+DHY+ PFDLS V+F+ TAN A IP PLLDRME
Sbjct: 425 MSMDFRGDPSSALLEVLDPEQNNAFSDHYVETPFDLSNVMFITTANGAHNIPRPLLDRME 484
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI + GYT EEKL+IA++HL+P+ + +HGL E + I E ++ +I+ YTRE+GVRNLER
Sbjct: 485 VIHISGYTEEEKLQIALQHLLPKQIKEHGLKEEQINITENTLRKIIREYTRESGVRNLER 544
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A+L R +A K+ E+ + +G + D
Sbjct: 545 EIASLCRKSARKIVTDEE---------IKEIGIGVQD----------------------- 572
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
LE LG PR+ AE+ G++ GL WT GG+ +E T
Sbjct: 573 ----------------LESYLGIPRY-RFGVAEQDDQVGVATGLAWTEMGGDTLAIEITT 615
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
GKG L LTG+LGDV+KESAQ A +++R++A +L + + L DIH+H P GA+
Sbjct: 616 FPGKGLLTLTGKLGDVMKESAQAAYSYIRSKADELGIDPDFHKKL----DIHVHVPEGAI 671
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+T+ +AL S S ++++ + AMTGE+TLRG VLPVGG+K+K+LAAHR GI
Sbjct: 672 PKDGPSAGITMASALASALSGRKIKHEVAMTGEVTLRGRVLPVGGIKEKVLAAHRAGITT 731
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+I+P N KD+ E+PA + +SLE IL + M+ VLE A
Sbjct: 732 IIMPSENKKDMEEIPANIKSSLEFILVEHMDRVLEIAL 769
>gi|74191601|dbj|BAE30373.1| unnamed protein product [Mus musculus]
Length = 710
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 298/547 (54%), Positives = 400/547 (73%), Gaps = 20/547 (3%)
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
L+ +LPW K++ + LD++AA+ LD+DHY + ++K+R++EYLAVR+LK + +GP+LCFV
Sbjct: 174 LLDNLPWNKSTTD-RLDIRAARILLDNDHYAMEKLKRRVLEYLAVRQLKNNLKGPILCFV 232
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV
Sbjct: 233 GPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGV 292
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV FDLS+V+F+ATAN
Sbjct: 293 NNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTT 352
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL + +QIP+ +I R
Sbjct: 353 ATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQHTTLAIITR 412
Query: 527 YTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEM 586
YTREAGVR+L+R A+ RA AVKVAE + ++A DV ADG +
Sbjct: 413 YTREAGVRSLDRKFGAICRAVAVKVAEGQHKEAKLDRSDV------------ADGEGCKE 460
Query: 587 EVIPMGESTHEVSNTFRIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGL 642
V+ + +S+T + P+++D L+ +LGPP + + E +ER++ PG+++GL
Sbjct: 461 HVLEDAKP-ESISDTADLALPPEMPILIDSHALKDILGPPLY-ELEVSERLSQPGVAIGL 518
Query: 643 VWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-M 701
WT GG++ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R+ A L G
Sbjct: 519 AWTPLGGKIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYHLTNAFGSF 578
Query: 702 NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPV 761
+LL DIH+HFPAGAV K GPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPV
Sbjct: 579 DLLDNTDIHLHFPAGAVTKVGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPV 638
Query: 762 GGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
GG+KDK+LAAHR G+K++I+P+RN KDL E+P+ V L + A +++VL AF+GG P
Sbjct: 639 GGIKDKVLAAHRAGLKQIIIPQRNEKDLEEIPSNVRQDLSFVTASCLDEVLNAAFDGGFP 698
Query: 822 WRQHSKL 828
+ L
Sbjct: 699 VKTRPGL 705
>gi|357040206|ref|ZP_09101995.1| anti-sigma H sporulation factor, LonB [Desulfotomaculum gibsoniae
DSM 7213]
gi|355356870|gb|EHG04651.1| anti-sigma H sporulation factor, LonB [Desulfotomaculum gibsoniae
DSM 7213]
Length = 808
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 333/776 (42%), Positives = 474/776 (61%), Gaps = 78/776 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A L ++ P G T V++EG+ R + + ++ +++ +E
Sbjct: 67 YNVGTVAEVKQL---LKLPGG--TIRVLVEGIARAKINKYVSKEPFFS----------VE 111
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
++Q ++ D S Q +A L++ EQ K + + ++ V I +LADI
Sbjct: 112 VDQYAEEFD---KSSQVEALMRNLVTQFEQYVKLSKKIPPETVVTVVNIDDPGRLADIVA 168
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ + E++ +L+++D+ RL K +V R L+ + + KI +V Q+ K+QKE+ L
Sbjct: 169 SHLTLRIEDKQSVLEAIDIVKRLDKLCAIVARELEIVEMERKINVRVRKQMEKTQKEYYL 228
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
R+Q++AI+ ELG+ DD + L K+ A +P + + KE+ RL+KM P
Sbjct: 229 REQIKAIQRELGEKDDRVAEGEELREKIAKAKLPKEVEEKALKEVERLEKMPPMAAEAAV 288
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + LPW K++ + LD+ A+ LD DHYGL VK+RI+EYLA+RKL +G
Sbjct: 289 VRNYLDWLLALPWSKSTRD-RLDINMAETVLDEDHYGLKIVKERILEYLAIRKLAKKMKG 347
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P++CFVGPPGVGKTSL SIA AL RKF+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G
Sbjct: 348 PIICFVGPPGVGKTSLGRSIARALERKFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQG 407
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+K G NPV LLDEIDK D RGDP+SALLEVLDPEQN +F+DHY+ P+DLS V+F+
Sbjct: 408 MKTAGSKNPVFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFSDHYIESPYDLSNVMFI 467
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
TAN IP PLLDRME+I + GYT EEK++IAMRHL+ + + +HGL +E +QI E +
Sbjct: 468 TTANIQHNIPRPLLDRMEIINISGYTEEEKVQIAMRHLLAKQIKEHGLNNEMVQISENTI 527
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ VI+ YTRE+GVRNLERN+A+L R AA ++ S K
Sbjct: 528 RRVIREYTRESGVRNLERNIASLCRKAAKQIV---------SGK---------------- 562
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
TS + V LE+ LG P++ AE+ G++
Sbjct: 563 ------------------------TSKVKVTVQNLEQFLGKPKYR-YGIAEQEDQVGVAT 597
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG+ +E T +GKG+L LTG+LGDV++ESAQ + ++VR+RA +L + E
Sbjct: 598 GLAWTEVGGDTLAIEITTYKGKGKLTLTGKLGDVMRESAQASYSYVRSRAAELGIKEE-- 655
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ DIH+H P GA+PKDGPSAG+T+ AL S + + VR D AMTGE+TLRG VLP
Sbjct: 656 --MFDKYDIHVHVPEGAIPKDGPSAGITMAVALASALTGRHVRYDVAMTGEITLRGRVLP 713
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+GG+K+K+LAAHR GIK V+LP N KD+ E+PA + +E++ M+ VL+ A
Sbjct: 714 IGGLKEKVLAAHRAGIKTVLLPMDNRKDIEEIPANIRKQIELVPVDHMDGVLKIAL 769
>gi|125972606|ref|YP_001036516.1| Lon-A peptidase [Clostridium thermocellum ATCC 27405]
gi|125712831|gb|ABN51323.1| ATP-dependent protease La [Clostridium thermocellum ATCC 27405]
Length = 815
Score = 603 bits (1554), Expect = e-169, Method: Compositional matrix adjust.
Identities = 336/761 (44%), Positives = 461/761 (60%), Gaps = 71/761 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R + E + ++ A + E VE+D + + +A ++S
Sbjct: 92 VLVEGISRAEICEFTQTEPFFMAEVE-------EKIYVEEDKNS---KTEIEALKRRVLS 141
Query: 132 VLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
E+ K + + +L + I +LADI A+ + E++ +L+ K+RL K
Sbjct: 142 TFEEYSKLNNKVSPETVLSIMNIDDPDQLADIITANLMLKVEQKQEILNEFKTKIRLQKL 201
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
E + R ++ +++ +I KV Q+ K+QKE+ LR+Q++AI+ ELGD D ++ +R
Sbjct: 202 LETLVREIEIMQIEREINIKVRKQIDKTQKEYYLREQLKAIQSELGDKDGVVGEVEEYKR 261
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K+ + K V KEL RL KM P + R YL+ I DLPW K +EEI +DL
Sbjct: 262 KLAEGNFGEEVEKKVLKELDRLLKMPPGSAEGSVIRTYLDWIFDLPWNKKTEEI-IDLDR 320
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A++ LD DHYGL +VK+RIIEYLA+RKLK D +GP+LC GPPGVGKTS+A SIA AL R
Sbjct: 321 AQQILDEDHYGLEKVKERIIEYLAIRKLKKDLKGPILCLAGPPGVGKTSIAKSIARALNR 380
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
++R+SLGGV+DEA+IRGHRRTY+G+MPGR+I LK+ G NP++LLDEIDK SD RGD
Sbjct: 381 NYVRMSLGGVRDEAEIRGHRRTYVGAMPGRIISALKQAGSKNPLILLDEIDKMSSDFRGD 440
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
PA+A+LEVLD EQN F DHYL +PFDLS V+F+ TAN +P PLLDRMEVI L YT
Sbjct: 441 PAAAMLEVLDSEQNYAFRDHYLELPFDLSDVLFITTANNLDTVPRPLLDRMEVISLSSYT 500
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EEK++IAM++L P+ ++ HG L+I E V+ +I YTREAGVR LER +A + R
Sbjct: 501 EEEKVQIAMKYLFPKQIEAHGFKKSNLKIDEPAVREIINCYTREAGVRELERQIAGVCRK 560
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS 606
A K+ Q+ T +IT+
Sbjct: 561 VARKLVSSNQK-------------------------------------------TVKITA 577
Query: 607 PLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELH 666
A +EK LG ++ A E+ G++ GL WT GG+ +E T M GKG L
Sbjct: 578 ------ASIEKYLGTKKYRYDMANEKDEV-GVATGLAWTPVGGDTLSIEVTLMEGKGSLE 630
Query: 667 LTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAG 726
LTGQLGDV+KESA+ A++++R+RA + + +D N DIHIH P GA+PKDGPSAG
Sbjct: 631 LTGQLGDVMKESARAAMSYIRSRA-EYYGIDKDFYN---KYDIHIHVPEGAIPKDGPSAG 686
Query: 727 VTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNL 786
+TL TA+VS + K VR + AMTGE+TLRG VLP+GGVK+K+LAAHR GI +I+P N
Sbjct: 687 ITLATAMVSALTGKPVRKNVAMTGEITLRGRVLPIGGVKEKVLAAHRAGIDTIIIPVENK 746
Query: 787 KDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP-WRQHS 826
KDL E+P V +++ +LA ME VL A P RQ S
Sbjct: 747 KDLEEIPENVRKTIKFVLADNMETVLNTALVKTKPKGRQKS 787
>gi|410659263|ref|YP_006911634.1| ATP-dependent protease La Type I [Dehalobacter sp. DCA]
gi|410662250|ref|YP_006914621.1| ATP-dependent protease La Type I [Dehalobacter sp. CF]
gi|409021618|gb|AFV03649.1| ATP-dependent protease La Type I [Dehalobacter sp. DCA]
gi|409024606|gb|AFV06636.1| ATP-dependent protease La Type I [Dehalobacter sp. CF]
Length = 794
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 335/756 (44%), Positives = 472/756 (62%), Gaps = 71/756 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSL---EMTKIEMEQVEQDPDFIALSR 120
P G T V++EG+CR ++E ++ A++ E E+E + + +L+
Sbjct: 79 PGG--TMRVLVEGICRAEIKEFLAEDPFFKAQVERFPGNERMTPELENMTR-----SLTH 131
Query: 121 QFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLK 180
QF+ A L +K VL P ++AD+ + + E++ +L ++D+
Sbjct: 132 QFEEYAR-----LSKKVSPEAIGSVLAVKEP-GRMADLVASHLNLKIEDKQAVLGAIDVS 185
Query: 181 VRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 240
RL K TEL+ R ++ + + +I +V Q+ K+QKE+ LR+Q++AI++ELGD D+ + +
Sbjct: 186 ERLEKLTELIMREIEILELERRIGLRVRKQMEKAQKEYYLREQIKAIQKELGDKDEKQAE 245
Query: 241 LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI 300
+ + K++ A + + KEL RL+KM T R Y++ I LPW KAS +
Sbjct: 246 IEEYKEKIEKANLTDEAREKALKELDRLEKMAASSAEGTVVRTYIDWIIALPWNKASRDK 305
Query: 301 DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 360
D+ A++ L+ DHYGL +VK+RI+EYL++RKL P+ R P+LCF+GPPGVGKTSLA SI
Sbjct: 306 G-DMHKAEKILEEDHYGLEKVKERILEYLSIRKLTPNMRSPILCFIGPPGVGKTSLAKSI 364
Query: 361 ASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTG 420
A +L RKF+R+SLGGV+DEA+IRGHRRTYIG++PGR+I G+++V NPV L DEIDK
Sbjct: 365 ARSLDRKFVRMSLGGVRDEAEIRGHRRTYIGALPGRVIQGIRKVETKNPVFLFDEIDKMS 424
Query: 421 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVI 480
SD RGDPASA+LEVLDPEQN ++ DHYL VPFDLSKV+F+ TAN + IP PLLDRMEVI
Sbjct: 425 SDFRGDPASAMLEVLDPEQNHSYADHYLEVPFDLSKVLFIMTANYIENIPRPLLDRMEVI 484
Query: 481 ELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNL 540
L GYT +EK+ IA+RHL+P+ + HGL +++ A V +++ YTRE+GVRNLER +
Sbjct: 485 HLSGYTEDEKVNIAVRHLVPKQMKVHGLKEIVVRLDSACVLKIVRGYTRESGVRNLEREI 544
Query: 541 AALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSN 600
A + R AV+V ++E + + +D+ L
Sbjct: 545 ANVLRKVAVRVVKKEWKPRTLTPEDIETL------------------------------- 573
Query: 601 TFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
LG PR+ R G +VGL +T GG+V +EAT +
Sbjct: 574 ------------------LGAPRYFYRTVGFEPEI-GAAVGLAYTEVGGDVLTIEATPLA 614
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPK 720
GKG L LTG+LGDV+KESAQ LT+VR++A L +++D + L D+HIH P GAVPK
Sbjct: 615 GKGRLTLTGKLGDVMKESAQAGLTFVRSQAESLG-ISKDFYDQL---DLHIHVPEGAVPK 670
Query: 721 DGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVI 780
DGPSAG+T+ TA+ S S + VR D AMTGE+TLRG VLP+GG+K+K+LAAHR GIK +I
Sbjct: 671 DGPSAGITMATAMASALSSRAVRQDVAMTGEITLRGNVLPIGGLKEKVLAAHRAGIKTII 730
Query: 781 LPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LPE+NLKDL E+P + LE KRME+VL+ A
Sbjct: 731 LPEKNLKDLEEIPEEIRKELEFRFVKRMEEVLDIAL 766
>gi|256004692|ref|ZP_05429668.1| ATP-dependent protease La [Clostridium thermocellum DSM 2360]
gi|281416798|ref|ZP_06247818.1| ATP-dependent protease La [Clostridium thermocellum JW20]
gi|385779476|ref|YP_005688641.1| ATP-dependent protease La [Clostridium thermocellum DSM 1313]
gi|419721830|ref|ZP_14248984.1| ATP-dependent protease La [Clostridium thermocellum AD2]
gi|419725618|ref|ZP_14252658.1| ATP-dependent protease La [Clostridium thermocellum YS]
gi|255991285|gb|EEU01391.1| ATP-dependent protease La [Clostridium thermocellum DSM 2360]
gi|281408200|gb|EFB38458.1| ATP-dependent protease La [Clostridium thermocellum JW20]
gi|316941156|gb|ADU75190.1| ATP-dependent protease La [Clostridium thermocellum DSM 1313]
gi|380771004|gb|EIC04884.1| ATP-dependent protease La [Clostridium thermocellum YS]
gi|380782089|gb|EIC11733.1| ATP-dependent protease La [Clostridium thermocellum AD2]
Length = 815
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 336/761 (44%), Positives = 461/761 (60%), Gaps = 71/761 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R + E + ++ A + E VE+D + + +A ++S
Sbjct: 92 VLVEGISRAEICEFTQTEPFFMAEVE-------EKIYVEEDKNS---KTEIEALKRRVLS 141
Query: 132 VLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
E+ K + + +L + I +LADI A+ + E++ +L+ K+RL K
Sbjct: 142 TFEEYSKLNNKVSPETVLSIMNIDDPDQLADIITANLMLKVEQKQEILNEFKTKIRLQKL 201
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
E + R ++ +++ +I KV Q+ K+QKE+ LR+Q++AI+ ELGD D ++ +R
Sbjct: 202 LETLVREIEIMQIEREINIKVRKQIDKTQKEYYLREQLKAIQSELGDKDGVVGEVEEYKR 261
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K+ + K V KEL RL KM P + R YL+ I DLPW K +EEI +DL
Sbjct: 262 KLVEGNFGEEVEKKVLKELDRLLKMPPGSAEGSVIRTYLDWIFDLPWNKKTEEI-IDLDR 320
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A++ LD DHYGL +VK+RIIEYLA+RKLK D +GP+LC GPPGVGKTS+A SIA AL R
Sbjct: 321 AQQILDEDHYGLEKVKERIIEYLAIRKLKKDLKGPILCLAGPPGVGKTSIAKSIARALNR 380
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
++R+SLGGV+DEA+IRGHRRTY+G+MPGR+I LK+ G NP++LLDEIDK SD RGD
Sbjct: 381 NYVRMSLGGVRDEAEIRGHRRTYVGAMPGRIISALKQAGSKNPLILLDEIDKMSSDFRGD 440
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
PA+A+LEVLD EQN F DHYL +PFDLS V+F+ TAN +P PLLDRMEVI L YT
Sbjct: 441 PAAAMLEVLDSEQNYAFRDHYLELPFDLSDVLFITTANNLDTVPRPLLDRMEVISLSSYT 500
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EEK++IAM++L P+ ++ HG L+I E V+ +I YTREAGVR LER +A + R
Sbjct: 501 EEEKVQIAMKYLFPKQIEAHGFKKSNLKIDEPAVREIINCYTREAGVRELERQIAGVCRK 560
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS 606
A K+ Q+ T +IT+
Sbjct: 561 VARKLVSSNQK-------------------------------------------TVKITA 577
Query: 607 PLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELH 666
A +EK LG ++ A E+ G++ GL WT GG+ +E T M GKG L
Sbjct: 578 ------ASIEKYLGTKKYRYDMANEKDEV-GVATGLAWTPVGGDTLSIEVTLMEGKGSLE 630
Query: 667 LTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAG 726
LTGQLGDV+KESA+ A++++R+RA + + +D N DIHIH P GA+PKDGPSAG
Sbjct: 631 LTGQLGDVMKESARAAMSYIRSRA-EYYGIDKDFYN---KYDIHIHVPEGAIPKDGPSAG 686
Query: 727 VTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNL 786
+TL TA+VS + K VR + AMTGE+TLRG VLP+GGVK+K+LAAHR GI +I+P N
Sbjct: 687 ITLATAMVSALTGKPVRKNVAMTGEITLRGRVLPIGGVKEKVLAAHRAGIDTIIIPVENK 746
Query: 787 KDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP-WRQHS 826
KDL E+P V +++ +LA ME VL A P RQ S
Sbjct: 747 KDLEEIPENVRKTIKFVLADNMETVLNTALVKTKPKGRQKS 787
>gi|312622796|ref|YP_004024409.1| ATP-dependent protease la [Caldicellulosiruptor kronotskyensis
2002]
gi|312203263|gb|ADQ46590.1| ATP-dependent protease La [Caldicellulosiruptor kronotskyensis
2002]
Length = 775
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 333/746 (44%), Positives = 463/746 (62%), Gaps = 62/746 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+++EGL R V + + Y+ + + +I++E DP+ AL R A E +
Sbjct: 89 ILVEGLYRARVIKYLSTDPYFLVEVEEYKENEIKLED---DPELEALIRNV-VGAFEEFA 144
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
L K V P +LAD+ A+ + E++ ++L+ VDLK RL+K EL+
Sbjct: 145 RLTNKIPPDAILSVTTIQSP-DQLADVIAANVVVKLEDKQLLLEKVDLKERLAKLYELIL 203
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ + I + KI KV+ Q+ K+QKE+ LR+Q++AI+ ELG+ D + +++
Sbjct: 204 KEKEIIEIERKIAIKVKKQIDKTQKEYYLREQLKAIQSELGEKDSLFSEAEEYREQVKKL 263
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
G+ + V KE+ RL+K+ P P R YL+ I DLPW S+E +D+ K+ L
Sbjct: 264 GLSQESLQKVFKEIDRLEKLPPNSPEVGVIRTYLDWIVDLPWNVRSDE-KIDINVVKKVL 322
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHYGL +VK+RI+EY+AVRKLK D +GP+LC VGPPGVGKTS+A SIA AL R ++RI
Sbjct: 323 DEDHYGLTKVKERILEYIAVRKLKNDMKGPILCLVGPPGVGKTSIAKSIARALNRNYVRI 382
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGG++DEA+IRGHR+TY+G+MPGR+I L++ NP++LLDEIDK +D RGDPASAL
Sbjct: 383 SLGGLRDEAEIRGHRKTYVGAMPGRIIYALRQAKTKNPLILLDEIDKMSNDFRGDPASAL 442
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLD EQN F DHY+ +PFDLS+V+F+ATAN + IP PLLDR+EVIE+ GYT EEKL
Sbjct: 443 LEVLDSEQNFAFRDHYIEIPFDLSEVMFIATANTLETIPRPLLDRLEVIEITGYTEEEKL 502
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
IA R+L+P+ L+Q+GL L+ E+ +K +I YTRE+GVRNLER +A L R A ++
Sbjct: 503 EIARRYLLPKQLEQNGLKKSQLRCEESAIKDIIAFYTRESGVRNLEREIARLCRRVAKEI 562
Query: 552 AEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
E+ ++ +SK++ + LG+P +R
Sbjct: 563 LEENKKMVKITSKNLEKYLGTP----------------------------KYR------R 588
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
DE + E +G I GL WT FGGE FVEA M G G+L LTGQ
Sbjct: 589 DELIEENRIG-----------------IVTGLAWTPFGGETLFVEALVMPGSGKLELTGQ 631
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESA+ A++ +R+RA +L + N + DIHIH P GA+PKDGPSAGVT+
Sbjct: 632 LGDVMKESAKAAVSIIRSRAKELGI----DQNFYKECDIHIHVPEGAIPKDGPSAGVTMA 687
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TA+VS S+++VR D AMTGE+TL G VLP+GGVK+K+LAA R GIK VILP N KD+
Sbjct: 688 TAMVSALSQRKVRYDIAMTGEITLSGRVLPIGGVKEKVLAAKRMGIKNVILPIGNKKDVD 747
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAF 816
E+ V + I K +++V + A
Sbjct: 748 ELEDYVKKDMNFIFVKTIDEVFDVAI 773
>gi|118581016|ref|YP_902266.1| ATP-dependent protease La [Pelobacter propionicus DSM 2379]
gi|118503726|gb|ABL00209.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Pelobacter propionicus DSM 2379]
Length = 823
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 330/774 (42%), Positives = 484/774 (62%), Gaps = 67/774 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
GV A+ + R ++ P GR+ +V +GL + + E ++ +YT R+ L +M
Sbjct: 81 GVGTVAM-IMRMLKLPDGRIKILV--QGLAKARITEFTSEKPFYTVRVERLN----DMPL 133
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFEISF 167
++ + AL R + +L V+E ++ V+LE + +AD+ ++ +
Sbjct: 134 LDATLETEALVRTVRE---QLAKVVELGKQVSPEVIVILENIQDPGSMADLIASNMGLKV 190
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
+ +L++VD RL+K EL++R ++ + V KI ++ K+Q+E+ LR+QMRAI
Sbjct: 191 ADAQQLLETVDPITRLTKINELLNREVELLSVQAKIQSAAREEMGKNQREYYLREQMRAI 250
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
++ELGD + ED L+ + + ++SA MP ++ K K+L RL+ M P R YL+
Sbjct: 251 QQELGDGEGKED-LIEIRKAIESARMPESVQKEALKQLGRLENMHPDAGEAGIIRTYLDW 309
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
+ ++PW K+S + LD+ A++ L+ DH+ L ++K+RI+E+L+VRKLK +GP+LCFVG
Sbjct: 310 LVEIPWSKSSRD-SLDIGRAEKILNEDHFYLDKIKERILEFLSVRKLKKKMKGPILCFVG 368
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL SIA A+ RKF+RISLGGV+DEA+IRGHRRTYIG++PGR+I G+K+ G
Sbjct: 369 PPGVGKTSLGKSIARAMNRKFVRISLGGVRDEAEIRGHRRTYIGALPGRIIQGMKQAGTN 428
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDE+DK G D +GDP+SALLEVLDPEQN +F+DHY+N P++LS V+F+ATAN+
Sbjct: 429 NPVFMLDELDKLGYDYKGDPSSALLEVLDPEQNHSFSDHYINQPYNLSNVMFIATANQID 488
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
P+P L DRMEVI L GYT EEKL I+ R L+PR + ++GL + + + + +I +Y
Sbjct: 489 PVPSALRDRMEVITLSGYTEEEKLEISRRFLVPRQMKENGLKEKNIAFDDEAIAEIIAKY 548
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TREAG+RNLER + + R A KVAE ++ ++K++H
Sbjct: 549 TREAGLRNLEREIGTVCRKVARKVAEGQKRITRVTAKNLH-------------------- 588
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
TF LG P+F E +R G+ GL WT
Sbjct: 589 -------------TF----------------LGAPKFMREEDLDRNEI-GVVNGLAWTPV 618
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGR 707
GGE+ +EA+ M+GK L LTGQLGDV+KESAQ A +++RA A +L + E Q
Sbjct: 619 GGEILHIEASQMQGKAGLTLTGQLGDVMKESAQAAHSYIRAHAEELSIKPE----FFQQH 674
Query: 708 DIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDK 767
+IH+H PAGA+PKDGPSAGV + TALVS+ +R VR D AMTGE+TLRG VLP+GG+K+K
Sbjct: 675 EIHVHVPAGAIPKDGPSAGVAMTTALVSVITRIPVRKDVAMTGEITLRGKVLPIGGLKEK 734
Query: 768 ILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
ILAA R +K VI+P +N KDL +VPA +L ++I+ ++++VL+ A E P
Sbjct: 735 ILAAVRSEMKTVIIPAQNKKDLEDVPAEILKRVKIVPVTKIDEVLKLALEKYPP 788
>gi|82703216|ref|YP_412782.1| ATP-dependent protease La [Nitrosospira multiformis ATCC 25196]
gi|82411281|gb|ABB75390.1| ATP-dependent protease La [Nitrosospira multiformis ATCC 25196]
Length = 790
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 327/756 (43%), Positives = 473/756 (62%), Gaps = 64/756 (8%)
Query: 73 VLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISV 132
V +GL RFS++E+ + AR+ ++ E E + AL+ Q + +E++S+
Sbjct: 96 VCQGLGRFSIEEMIEDRPFLAARV------RLIAEPDEVSTEAEALAMQLRERTVEILSL 149
Query: 133 LEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDR 192
L L T LADI + + E+ ++L++V + RL K +++ R
Sbjct: 150 L--PGVPAELAHALQATRAPSHLADIAASLLDTEVAEKQMLLETVSTEERLRKVLQILSR 207
Query: 193 HLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAG 252
++ +R++++I ++ + L +++FLLR+Q++ I++ELG+ + D+ ++ L+ + AG
Sbjct: 208 RIEVLRLSQEIGERTKEHLEDRERKFLLREQLKTIQKELGETEGDDQEIEKLDEAVAKAG 267
Query: 253 MPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLD 312
MP I +KEL+RLK+M P Y+ YLE + +LPW K E+ +DL AA+ L+
Sbjct: 268 MPEEIEAQARKELQRLKRMPPASSEYSMLHTYLEWMTELPW-KLPEDAPIDLDAARRILE 326
Query: 313 SDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRIS 372
DH+GL RVKQRIIE+LAV+KLKP R P+LCFVGPPGVGKTSL SIA AL R F+R+S
Sbjct: 327 HDHFGLERVKQRIIEFLAVQKLKPQGRAPILCFVGPPGVGKTSLGQSIARALQRPFVRVS 386
Query: 373 LGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALL 432
LGGV DEA++RGHRRTYIG+MPG ++ L++ G N VM+LDE+DK + + GDP++ALL
Sbjct: 387 LGGVHDEAEMRGHRRTYIGAMPGNIVQSLRKAGARNCVMMLDEVDKMSASLHGDPSAALL 446
Query: 433 EVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLR 492
EVLDPEQN TF D+YL VPFDLS+V+F+ATAN +PPP+ DRME+I+LPGYT EEKL+
Sbjct: 447 EVLDPEQNSTFRDNYLGVPFDLSRVVFIATANVIDNVPPPVRDRMEIIDLPGYTREEKLQ 506
Query: 493 IAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVA 552
IA R+L+ R + +GL + +I + +I YTREAGVR LER + + R AA++VA
Sbjct: 507 IAQRYLVGRQREVNGLSEDQCEISVEALDGIIANYTREAGVRQLEREIGRVMRHAAMRVA 566
Query: 553 EQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDE 612
AE ++ V D
Sbjct: 567 SD---------------------------AEAKVRV----------------------DA 577
Query: 613 AMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLG 672
A L+ +LGP +F + E + PG++ GL WT GG++ F+EAT + G+G+L LTGQLG
Sbjct: 578 ADLDTILGPAKF-EHETGLLTSLPGVATGLAWTPVGGDILFIEATRVSGRGQLILTGQLG 636
Query: 673 DVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTA 732
V+KESAQ ALT ++ RA L + A ++ +G D+H+H PAGA+PKDGPSAGV + A
Sbjct: 637 GVMKESAQAALTLLKGRADSLHIPA----SVFEGIDVHVHVPAGAIPKDGPSAGVAMFIA 692
Query: 733 LVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEV 792
L SLF+ + V D AMTGE++LRG+VLPVGG+K+K+LAA R G++ V+LP RN KDL EV
Sbjct: 693 LSSLFTNRPVHRDVAMTGEISLRGMVLPVGGIKEKVLAAQRAGLRVVLLPARNEKDLREV 752
Query: 793 PAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
P ++LE + + ++D + QA G RQ S+
Sbjct: 753 PETTRSTLEFVFLETVDDAI-QASLGQRARRQESEF 787
>gi|414153436|ref|ZP_11409762.1| Lon protease [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455115|emb|CCO07665.1| Lon protease [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 809
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 331/758 (43%), Positives = 458/758 (60%), Gaps = 75/758 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EG+ R + + Y+ I E+ E++P+ AL R
Sbjct: 81 PGG--TIRVLVEGIARARIVQYQHMEPYFRVEIEQYS------EEFEKNPEIEALMRS-- 130
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+ EQ K R + ++ V + +LADI + + E++ +L++V+
Sbjct: 131 -----LVYQFEQYVKLSKRIPPETVVSVVNLEEPGRLADIIASHLALRIEDKQKVLEAVE 185
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL K +V R L+ + + KI +V Q+ K+QKE+ LR+QM+AI++ELG+ D+
Sbjct: 186 IVDRLEKLCAIVARELEIVELERKINIRVRKQMEKTQKEYYLREQMKAIQKELGEKDERV 245
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ L K+ A +P + KE+ RL+KM P T R YL+ + LPW K++
Sbjct: 246 AECEELREKIAKAKLPKEAEEKALKEVDRLEKMPPMAAEATVVRNYLDWLLSLPWSKSTR 305
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ +D+KAA+E LD+DHYGL K+RIIEYLA+RKL +GP+LC VGPPGVGKTSL
Sbjct: 306 D-RIDIKAAQEVLDNDHYGLKDPKERIIEYLAIRKLAKKMKGPILCLVGPPGVGKTSLGR 364
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA AL RKF+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G++ G NPV LLDEIDK
Sbjct: 365 SIARALDRKFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMRNAGSKNPVFLLDEIDK 424
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
SD RGDPA+ALLEVLDPEQN TF+DHY+ PFDLS V+F+ TAN IP PLLDRME
Sbjct: 425 MASDFRGDPAAALLEVLDPEQNSTFSDHYIETPFDLSNVMFITTANNMWSIPRPLLDRME 484
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI++ GYT +EKL+IA RHL+P+ + +HGL E + + + + VI+ YTRE+GVRNLER
Sbjct: 485 VIQISGYTEDEKLQIAKRHLLPKQIKEHGLTGEMIGVSDNTILKVIREYTRESGVRNLER 544
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A L R A K+ E + +++++
Sbjct: 545 KIATLCRKTAKKIVAGEAAKVKITAQNL-------------------------------- 572
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
E+ LG PR+ AE+ GI GL WT GG+ +E T
Sbjct: 573 -----------------EQFLGIPRY-RYGVAEKNDEVGIVTGLAWTEVGGDTLVIEVTT 614
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+G G L LTG+LGDV+KESAQ ++VR+RA DL + E L + D+HIH P GA+
Sbjct: 615 YKGNGRLTLTGKLGDVMKESAQAGYSYVRSRAQDLGIDQE----LFEKWDLHIHIPEGAI 670
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+T+ TA+ S+ + ++VR + AMTGE+TLRG VLPVGG+K+K++AAHR G K
Sbjct: 671 PKDGPSAGITMATAMASVLTGRKVRHEVAMTGEITLRGRVLPVGGIKEKVMAAHRAGNKV 730
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
++LP N KDL E+P + LE L M+ VL+ A
Sbjct: 731 IVLPLDNKKDLEEIPQNIKKQLEFKLVDHMDQVLDLAL 768
>gi|222528930|ref|YP_002572812.1| ATP-dependent protease La [Caldicellulosiruptor bescii DSM 6725]
gi|222455777|gb|ACM60039.1| ATP-dependent protease La [Caldicellulosiruptor bescii DSM 6725]
Length = 775
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 334/747 (44%), Positives = 464/747 (62%), Gaps = 64/747 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+++EGL R V + Y+ + + +I++E DP+ AL R A E +
Sbjct: 89 ILVEGLYRARVIRYLSTNPYFLVEVEEYKENEIKLED---DPELEALIRNV-VGAFEEFA 144
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
L K V P +LAD+ A+ + E++ ++L+ VDLK RL K E++
Sbjct: 145 RLTNKIPPDAILSVTTIQSP-DQLADVIAANVVVKLEDKQLLLEKVDLKERLVKLYEMIL 203
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ + I + KI KV+ Q+ K+QKE+ LR+Q++AI+ ELG+ D + +++
Sbjct: 204 KEKEIIEIERKIAIKVKKQIDKTQKEYYLREQLKAIQSELGEKDSLFSEAEEYREQVKKL 263
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWE-KASEEIDLDLKAAKER 310
G+ + V KE+ RL+K+ P P R YL+ I DLPW ++ E+ID++L K+
Sbjct: 264 GLSQESLQKVFKEIDRLEKLPPNSPEVGVIRTYLDWIVDLPWNVRSDEKIDINL--VKKV 321
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DHYGL +VK+RI+EY+AVRKLK D +GP+LC VGPPGVGKTS+A SIA AL R ++R
Sbjct: 322 LDEDHYGLTKVKERILEYIAVRKLKNDMKGPILCLVGPPGVGKTSIAKSIARALNRNYVR 381
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
ISLGG++DEA+IRGHR+TY+G+MPGR+I L++ NP++LLDEIDK +D RGDPASA
Sbjct: 382 ISLGGLRDEAEIRGHRKTYVGAMPGRIIYALRQAKTKNPLILLDEIDKMSNDFRGDPASA 441
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLD EQN F DHY+ +PFDLS+V+F+ATAN + IP PLLDR+EVIE+ GYT EEK
Sbjct: 442 LLEVLDSEQNFAFRDHYIEIPFDLSEVMFIATANTLETIPRPLLDRLEVIEITGYTEEEK 501
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
L IA R+L+P+ L+Q+GL L+ E+ +K +I YTRE+GVRNLER +A L R A +
Sbjct: 502 LEIARRYLLPKQLEQNGLKKSQLRCEESAIKDIIAFYTRESGVRNLEREIARLCRRVAKE 561
Query: 551 VAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLV 609
+ E+ ++ +SK++ + LG+P +R
Sbjct: 562 ILEKNKKMVKITSKNLEKYLGTP----------------------------KYR------ 587
Query: 610 VDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTG 669
DE + E +G I GL WT FGGE FVEA M G G+L LTG
Sbjct: 588 RDELIEENRIG-----------------IVTGLAWTPFGGETLFVEALVMPGSGKLELTG 630
Query: 670 QLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTL 729
QLGDV+KESA+ A++ +R+RA +L + N + DIHIH P GA+PKDGPSAGVT+
Sbjct: 631 QLGDVMKESAKAAVSIIRSRAKELGI----DQNFYKECDIHIHVPEGAIPKDGPSAGVTM 686
Query: 730 VTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDL 789
TA+VS S++RVR D AMTGE+TL G VLP+GGVK+K+LAA R GIK VILP N KD+
Sbjct: 687 ATAMVSALSQRRVRYDVAMTGEITLSGRVLPIGGVKEKVLAAKRMGIKNVILPIGNKKDV 746
Query: 790 VEVPAAVLASLEIILAKRMEDVLEQAF 816
E+ V + I K +++V + A
Sbjct: 747 DELEDYVKKDMNFIFVKTIDEVFDVAI 773
>gi|374300678|ref|YP_005052317.1| anti-sigma H sporulation factor LonB [Desulfovibrio africanus str.
Walvis Bay]
gi|332553614|gb|EGJ50658.1| anti-sigma H sporulation factor, LonB [Desulfovibrio africanus str.
Walvis Bay]
Length = 833
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 334/772 (43%), Positives = 472/772 (61%), Gaps = 66/772 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G A + R ++ P GR+ V+++GL R V ++ A I +E E
Sbjct: 103 HQIGTVAMIM---RMLKMPDGRLK--VLVQGLSRARVTAFHEGEKHHMAEIQPIE----E 153
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
VE P+ AL R + + +++ + + + T VL +LAD+ ++ +
Sbjct: 154 PALVEHGPEVEALMRASREQSEKIMQL--RGISSPDITAVLGSVEEPGRLADLIASNLRV 211
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
E+ +L+ V+ RL + + + ++ + KI + + K+QK+F LR+QM+
Sbjct: 212 KVEDAQAILECVEPVKRLQLVNDQLAKEVEVASMQAKIQSMAKEGMDKAQKDFFLREQMK 271
Query: 226 AIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYL 285
AI+ ELG+ ++ ++ L + AGMP + +K+LRR++ M P + R YL
Sbjct: 272 AIRRELGETGEESEEADQLREAIAKAGMPKEVRSEAEKQLRRMESMHPDSSEASVIRTYL 331
Query: 286 ELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCF 345
+ + +LPW+K S++ LD+K A+ LD DHYGL +VK+RI+EYL+VRKL P +GP+LCF
Sbjct: 332 DWMVELPWKKMSKD-RLDIKEAQRILDEDHYGLDKVKERILEYLSVRKLNPKMKGPILCF 390
Query: 346 VGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVG 405
VGPPGVGKTSL SIA +LGR+F+R+SLGG++DEA+IRGHRRTYIGSMPGR+I +K+ G
Sbjct: 391 VGPPGVGKTSLGRSIARSLGRQFVRMSLGGMRDEAEIRGHRRTYIGSMPGRIIQSIKQAG 450
Query: 406 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 465
NP+++LDEIDK G+D RGDP+SALLEVLDPEQN TF DHYLNVPFDLSKV+F+ T+N
Sbjct: 451 TKNPIIMLDEIDKVGTDFRGDPSSALLEVLDPEQNYTFQDHYLNVPFDLSKVMFICTSNV 510
Query: 466 AQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQ 525
IP PL DRME+I +PGYT +K++IA +L+PR ++GL + +QI + ++ VI+
Sbjct: 511 LDTIPGPLRDRMEIIRIPGYTESDKVKIARTYLVPRQAKENGLSEDEVQITDQVIAKVIR 570
Query: 526 RYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVE 585
YTREAG+RNLER L ++ R A K AE ++
Sbjct: 571 EYTREAGLRNLERELGSVCRKLARKKAEGKE----------------------------- 601
Query: 586 MEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWT 645
P V +L K+LG P F E E+ PG++ GL WT
Sbjct: 602 --------------------GPFKVTANVLPKMLGIPPFRAEE-REKDLPPGVATGLAWT 640
Query: 646 NFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQ 705
+GGE+ +E + M GKG L LTGQLG+V+KESAQ AL++ R+RA L + A +
Sbjct: 641 PYGGEILHIEISTMPGKGRLTLTGQLGEVMKESAQAALSYARSRAAKLGIDA----DFSD 696
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
DIHIH PAGA PKDGPSAGVTLVTAL+S + RV +D AMTGE+TLRG VLPVGG+K
Sbjct: 697 KNDIHIHVPAGATPKDGPSAGVTLVTALISALTGTRVCSDVAMTGEITLRGRVLPVGGIK 756
Query: 766 DKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+KILAA GIK VI+P+ N KDL ++PA +L + I + ++++ A E
Sbjct: 757 EKILAAVSQGIKWVIIPKANEKDLQDIPAELLRKITIKPVELIDEIWPLACE 808
>gi|94969078|ref|YP_591126.1| ATP-dependent protease La [Candidatus Koribacter versatilis
Ellin345]
gi|302425033|sp|Q1IPZ8.1|LON_ACIBL RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|94551128|gb|ABF41052.1| ATP-dependent proteinase [Candidatus Koribacter versatilis
Ellin345]
Length = 814
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 325/756 (42%), Positives = 467/756 (61%), Gaps = 73/756 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
+ V EGL R V E Y A + ++ F S + +A
Sbjct: 100 SLFVFAEGLERVRVTEYVQLNPYMRATVETVPEA------------FPPKSAEIEALQRN 147
Query: 129 LISVLEQKQKTGGRTKVLLETVPIH-----KLADIFVASF-EISFEEQLVMLDSVDLKVR 182
++++ +Q L TV ++ +L D +S +S +++ +L++ D+++R
Sbjct: 148 VLTLFQQIVTGSPTLSDELSTVAMNIEEPGRLVDFVASSLPSLSTKDKQEILETADVQIR 207
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L K + + + L+ ++ KI +V+ ++ ++Q+E+ LR+Q++AI++ELG+ DD D
Sbjct: 208 LDKINQHLAKELEVQQLRNKIQSEVQDRVQQTQREYYLREQLKAIQKELGEQDDSTRDAD 267
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
L K+++AGMP ++ K KEL RL +M P Y+ +R Y+E +A LPW+K+S ++
Sbjct: 268 ELREKVEAAGMPDDVKKEALKELGRLARMSPMAADYSVTRNYIEWLAVLPWQKSSGAGEI 327
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
D+ AK+ LD DHY L +VK RI++YL+VR+LKP+ +GP+LCF GPPGVGKTSL SIA
Sbjct: 328 DIPKAKDILDEDHYDLQKVKDRILDYLSVRRLKPNMKGPILCFSGPPGVGKTSLGKSIAR 387
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
ALGRKF+RISLGGV DEA+IRGHRRTYIG++PG+++ G++R +PV +LDEIDK G D
Sbjct: 388 ALGRKFVRISLGGVHDEAEIRGHRRTYIGALPGQIMQGIRRAETNDPVFMLDEIDKVGRD 447
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
RGDP++ALLE LDPEQN +F D+YL+VPFDLSKV+F+ TAN+ PIP PL DRME+I+L
Sbjct: 448 FRGDPSAALLEALDPEQNNSFRDNYLDVPFDLSKVLFITTANQLDPIPEPLRDRMEIIDL 507
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GY+ EEK+ IA R+LIPR +++G+ + ++ E V+ +I+ YTREAGVRNLERN+
Sbjct: 508 QGYSEEEKVHIAFRYLIPRQEEENGITKDMIEFSEEAVRRIIRHYTREAGVRNLERNIGT 567
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
+ R A ++AE + E+
Sbjct: 568 VCRKLARRIAEGKTEK-------------------------------------------- 583
Query: 603 RITSPLVVDEAMLEKVLGPPRFD-DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRG 661
L V + ++LG + D E AER G+ VGL WT GG++ FVEAT M+G
Sbjct: 584 -----LAVTPQTITEMLGGEKVRVDTEIAERTKRAGVVVGLAWTPAGGDILFVEATTMKG 638
Query: 662 KGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKD 721
KG +TGQLGDV++ES Q AL+WV++ A L + E + DIHIH PAGA+PKD
Sbjct: 639 KGGFTMTGQLGDVMRESMQAALSWVKSNAGKLGIDEE----FFEKHDIHIHVPAGAIPKD 694
Query: 722 GPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVIL 781
GPSAGVT+VTALVSL + K +R TAMTGE+TL G VLP+GGVK+K LAA R G+K +IL
Sbjct: 695 GPSAGVTMVTALVSLLTDKPLRPLTAMTGEITLSGNVLPIGGVKEKTLAAKRAGVKTIIL 754
Query: 782 PERNLKDLVE-VPAAVLASLEIILAKRMEDVLEQAF 816
P N ++ E + L +E+ K +++VLE A
Sbjct: 755 PSENKMNMDEDLTPEQLQGIEVHYVKTIDEVLEIAL 790
>gi|163845899|ref|YP_001633943.1| ATP-dependent protease La [Chloroflexus aurantiacus J-10-fl]
gi|222523621|ref|YP_002568091.1| ATP-dependent protease La [Chloroflexus sp. Y-400-fl]
gi|163667188|gb|ABY33554.1| ATP-dependent protease La [Chloroflexus aurantiacus J-10-fl]
gi|222447500|gb|ACM51766.1| ATP-dependent protease La [Chloroflexus sp. Y-400-fl]
Length = 790
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 346/766 (45%), Positives = 473/766 (61%), Gaps = 93/766 (12%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARIS-SLEMTKIEMEQVEQDPDFIALSRQF 122
P G V ++L+G R VQ T Y A ++ +L+ + ME L+R
Sbjct: 91 PQGGVQ--LLLQGQARIKVQRWVTVKPYPQAHVTVALDPVDVSMETT-------GLARAV 141
Query: 123 KATAMELISVLEQKQKTGGRTKVLLETVPIHK--LADIFVASFEISFEEQLVMLDSVDLK 180
A +++ EQ + P H LAD+ A+ ++ ++Q +LD+ D+
Sbjct: 142 LAGFQQIV---EQSPNLPDELAIAAANAP-HPGMLADLIAANLNLNLDDQQKVLDTFDVH 197
Query: 181 VRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 240
RL +LV R L+ R I +K + ++SK+Q+E++LRQQ+ AIK ELG+ DD +
Sbjct: 198 ERL----QLVLRLLEREREILLIGRKAQEEVSKNQREYVLRQQLEAIKRELGETDDHAAE 253
Query: 241 LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI 300
+ L R+++ A +P+ + ++EL RL++M P YT +R YL+ + DLPW ++E+
Sbjct: 254 IAELRRRIEEANLPAEARQEAERELLRLERMPPGAAEYTVARTYLDWLLDLPWHTSTED- 312
Query: 301 DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK------PDARGPVLCFVGPPGVGKT 354
+LD+ A++ LD DHY L R+K+RIIEYLAVRKL+ +ARGP+LCFVGPPGVGKT
Sbjct: 313 NLDITQARQVLDEDHYDLERIKERIIEYLAVRKLRREEGADNEARGPILCFVGPPGVGKT 372
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
SL +SIA ALGRKF+R++LGGV+DEA+IRGHRRTYIG++PGR+I GL R NPV+LLD
Sbjct: 373 SLGASIARALGRKFVRVALGGVRDEAEIRGHRRTYIGALPGRIIQGLSRAKSNNPVLLLD 432
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
E+DK +GDPA+ALLEVLDPEQN F D YL+VPFDLSKV+FV TANRA IPP LL
Sbjct: 433 EVDKLSIGFQGDPAAALLEVLDPEQNVAFVDRYLDVPFDLSKVLFVCTANRADTIPPALL 492
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRME++EL GYT +EKL IA R+LIPR + G+ + ++ A ++ +I+ YT EAGVR
Sbjct: 493 DRMELLELAGYTEQEKLEIARRYLIPRQRREQGMTNRGPELTTAALQRLIREYTHEAGVR 552
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGES 594
+LER + A+ R A ++A EQ LP
Sbjct: 553 DLERRIGAIYRKMATRLA---SEQTLPDQ------------------------------- 578
Query: 595 THEVSNTFRITSPLVVDEAMLEKVLGPPRF------DDREAAERVAAPGISVGLVWTNFG 648
VD A L+ +LGPPRF D E G+ GL WT G
Sbjct: 579 ---------------VDAADLDDLLGPPRFRSETILGDNEV-------GVVTGLAWTPTG 616
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
G+V FVE + + G G+L LTGQLGDV+KESA+ ALT+ R+RA+ L + E + Q D
Sbjct: 617 GDVLFVEVSVIPGNGQLILTGQLGDVMKESARAALTYARSRASALGIDPE----VFQKSD 672
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
IHIH PAGAVPKDGPSAG+T+ +AL+S +R+ V AMTGE+TLRG VLP+GGVK+K+
Sbjct: 673 IHIHVPAGAVPKDGPSAGITIASALISALTRREVDKRIAMTGEVTLRGKVLPIGGVKEKL 732
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQ 814
LAA R G+++V+LP N DL +VPA LEI+L K M++VL +
Sbjct: 733 LAAQRAGVRKVLLPTENEIDLRDVPAETKEQLEIVLVKHMDEVLHE 778
>gi|169831632|ref|YP_001717614.1| ATP-dependent protease La [Candidatus Desulforudis audaxviator
MP104C]
gi|169638476|gb|ACA59982.1| ATP-dependent protease La [Candidatus Desulforudis audaxviator
MP104C]
Length = 797
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 335/758 (44%), Positives = 458/758 (60%), Gaps = 75/758 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EG+ R V Y+ + +EQ ++ + AL R
Sbjct: 81 PGG--TIRVLVEGIGRAKVVNYIAADPYFLVEVDQY------LEQFQKTTELEALMRH-- 130
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+ EQ K R + ++ V I +L+DI V+ + E++ +L+S+
Sbjct: 131 -----LVYQFEQYVKLSKRIPPETVVSVVNIDDPGRLSDIVVSHLPLRIEDKQSVLESIR 185
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL L+ + L+ + + +I +V Q+ K+QKE+ LR+QM+AI+ ELG+ D+
Sbjct: 186 IADRLENLCALLAKELEIVELERRINVRVRKQMEKTQKEYYLREQMKAIQRELGEKDERV 245
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ K+ A +P + + KE+ RL+KM P T R YL+ + LPW K +
Sbjct: 246 AEGEEYREKIAEAKLPKEVEEKALKEVERLEKMPPMAAEATVVRNYLDWLLALPWTKGTR 305
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD+ AA++ LD DHYGL +VK RIIEYLA+RKL +GP+LCFVGPPGVGKTSL
Sbjct: 306 D-RLDINAAQQILDEDHYGLDKVKDRIIEYLAIRKLAKKMKGPILCFVGPPGVGKTSLGK 364
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA AL RKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I G++ G NPV LLDE+DK
Sbjct: 365 SIARALERKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGMRTAGSKNPVFLLDEVDK 424
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
D RGDP++ALLEVLDPEQN +F+DHY+ VPFDLS V+F+ TAN A IP PL+DRME
Sbjct: 425 MSMDFRGDPSAALLEVLDPEQNNSFSDHYIEVPFDLSNVMFITTANLAHNIPRPLMDRME 484
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI + GYT EEK++IA+RHLIP+ L +HGL L I E ++ +I+ YTRE+GVRNLER
Sbjct: 485 VIYISGYTEEEKVQIAIRHLIPKQLKEHGLDRGNLTISEGAIRRLIREYTRESGVRNLER 544
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A L R A ++ ++ +Q + ++
Sbjct: 545 QIATLCRKTAKEIVAKKAKQIRVTKRNT-------------------------------- 572
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
E+ LG PRF AE+ G+ GL WT GG+ +E T
Sbjct: 573 -----------------EQFLGIPRF-RYGMAEKNDEVGVGTGLAWTEAGGDTLSIEVTV 614
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+GKG L LTG+LGDV++ESAQ ++VR+RA L++ DG + DIHIH P GA
Sbjct: 615 CKGKGGLTLTGKLGDVMRESAQAGYSYVRSRAEQLRI---DG-QFYEKTDIHIHIPEGAT 670
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+T+ TAL S + + VR D AMTGE+TLRG VLPVGG+K+KILAAHR GIK
Sbjct: 671 PKDGPSAGITIATALASALTGRLVRHDVAMTGEITLRGRVLPVGGLKEKILAAHRAGIKT 730
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
VILP N KDL ++PA V + LE +L + M++VLE A
Sbjct: 731 VILPLENKKDLEDIPANVRSKLEFVLVEHMDEVLETAL 768
>gi|167040913|ref|YP_001663898.1| ATP-dependent protease La [Thermoanaerobacter sp. X514]
gi|256752435|ref|ZP_05493294.1| ATP-dependent protease La [Thermoanaerobacter ethanolicus CCSD1]
gi|300914949|ref|ZP_07132265.1| ATP-dependent protease La [Thermoanaerobacter sp. X561]
gi|307723817|ref|YP_003903568.1| ATP-dependent protease La [Thermoanaerobacter sp. X513]
gi|166855153|gb|ABY93562.1| ATP-dependent protease La [Thermoanaerobacter sp. X514]
gi|256748704|gb|EEU61749.1| ATP-dependent protease La [Thermoanaerobacter ethanolicus CCSD1]
gi|300889884|gb|EFK85030.1| ATP-dependent protease La [Thermoanaerobacter sp. X561]
gi|307580878|gb|ADN54277.1| ATP-dependent protease La [Thermoanaerobacter sp. X513]
Length = 778
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 326/750 (43%), Positives = 458/750 (61%), Gaps = 71/750 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R +Q+++ ++ + E+ K ++E+ P+ AL R +IS
Sbjct: 87 VLVEGISRAEIQQVTRDDEFFEVEVIEKEVQK----EIEKTPELEALMRS-------VIS 135
Query: 132 VLEQKQKTGGRTKV--LLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
E+ R + L + I +LAD+ A ++ + +L+ D RL
Sbjct: 136 AFEEYVNMTSRLPIDSLYSVISIEEPGRLADMIAAHISLNTSQSQQLLECFDANKRLETL 195
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
+ + L+ + + ++I KV Q+ K QKE+ LR+Q++AIK ELG+ D+ + ++ E+
Sbjct: 196 LGFLMKELEILNIEKEINAKVRSQIDKLQKEYYLREQLKAIKAELGETDEVDQEIEEYEK 255
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K+ +P + K ++EL+RL KM P + R YL+ I DLPW +E+I LDLK
Sbjct: 256 KLNEKDLPEEVRKKAKEELKRLSKMAPGSAEASVVRTYLDWILDLPWNYETEDI-LDLKR 314
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A++ LD DHYGL +VK+RIIE+LAVR + P+LC VGPPGVGKTSL SIA A+ R
Sbjct: 315 AQKILDEDHYGLKKVKERIIEFLAVRSFYNKIKSPILCLVGPPGVGKTSLGRSIARAMNR 374
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
KF+R+SLGGV+DEA+IRGHRRTY+G++PG +I+ +K G NPV LLDEIDK SD RGD
Sbjct: 375 KFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIKIAGSKNPVFLLDEIDKMSSDFRGD 434
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
PASA+LEVLDPEQN TF DHYL++PFDLSKV+F+ TAN IP PLLDRMEVI + GYT
Sbjct: 435 PASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTVDTIPAPLLDRMEVIYVSGYT 494
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EEKL IA +LIP++L +HG+ + I E+ +K +I YTREAGVR LE+NL+ + R
Sbjct: 495 EEEKLHIAKDYLIPKILKEHGVPDNKIIIQESAIKGIISEYTREAGVRGLEKNLSQIVRK 554
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS 606
A K+ E+ +V+ +G+
Sbjct: 555 AIKKIVEENA------------------------------QVVKVGKRN----------- 573
Query: 607 PLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELH 666
L+ L P + +A ++ GI GL WT GGE+ VEA+ M G G+L+
Sbjct: 574 --------LQSYLDKPIYRPDKANQKDEV-GIVFGLAWTRVGGEILTVEASIMPGSGKLN 624
Query: 667 LTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAG 726
LTGQLGDV+KESAQ +++RA A L + + N+ DIHIH P GA+PKDGPSAG
Sbjct: 625 LTGQLGDVMKESAQAGFSYIRANAEKLNIDKDFYKNI----DIHIHVPEGAIPKDGPSAG 680
Query: 727 VTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNL 786
+T+VTA+VS + VR D AMTGE+TL G VLP+GGVK+K+LAAHR GI +VILP+ N
Sbjct: 681 ITMVTAMVSALKKVPVRKDVAMTGEITLTGKVLPIGGVKEKVLAAHRAGIGKVILPQENK 740
Query: 787 KDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+DL E+P +V LE +++++VL+ A
Sbjct: 741 RDLDEIPQSVKRKLEFKFVEKIDEVLDFAL 770
>gi|298290429|ref|YP_003692368.1| ATP-dependent protease La [Starkeya novella DSM 506]
gi|296926940|gb|ADH87749.1| ATP-dependent protease La [Starkeya novella DSM 506]
Length = 813
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 332/779 (42%), Positives = 477/779 (61%), Gaps = 82/779 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H GV A L R V P G T+ +VL+G RF V E + TAR+ LE ++
Sbjct: 94 HRMGVVANIL---RYVTAPDG--THHLVLQGEQRFHVDEFVREKPFVTARVKRLEESEER 148
Query: 106 MEQVEQDPDFIALSRQ-------FKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADI 158
++E F+ L Q EL++ + G LAD+
Sbjct: 149 SSEIEAR--FVHLQGQATEALELLPQVPAELVAAVRGSNSPAG-------------LADL 193
Query: 159 FVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEF 218
A +IS +E+ +L++VD+ R++K + L+ ++ +R++++I+++ + L + Q+E
Sbjct: 194 VAAYIDISADEKQELLETVDIVARMNKVSRLLAHRIEVLRLSQEISKQTKASLDERQREV 253
Query: 219 LLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGY 278
LLR+QM AI+++LG++D + D+ LE+ + AGMP ++ + +KEL RL++MQ Y
Sbjct: 254 LLREQMAAIQKQLGEDDGNSQDIADLEKAITDAGMPEDVEQMARKELGRLRRMQDASAEY 313
Query: 279 TSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDA 338
R YL+ + LPW K E +D+ A++ LD DH+GL ++K+RI+EYLAVRKL P
Sbjct: 314 GMVRTYLDWLIALPW-KLPETAPIDIAEARKILDEDHFGLDKIKRRIVEYLAVRKLAPGG 372
Query: 339 RGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLI 398
+ P+LCF GPPGVGKTSL SIA A+GRKF+R+SLGGV DEA+IRGHRRTY+G++PG +I
Sbjct: 373 KAPILCFAGPPGVGKTSLGQSIARAMGRKFVRVSLGGVHDEAEIRGHRRTYVGALPGNII 432
Query: 399 DGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVI 458
G+++ G + VM+LDEIDK GS ++GDP++A+LEVLDPEQN TF D+YL VPFDLS+V+
Sbjct: 433 QGIRKAGTRDCVMMLDEIDKMGSGIQGDPSAAMLEVLDPEQNGTFRDNYLGVPFDLSRVV 492
Query: 459 FVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEA 518
F+ATAN IP PL DRME+I+L GYT EKL+IA R+L+ R L+ +G+ E +++ +
Sbjct: 493 FIATANMLDTIPGPLRDRMEIIQLTGYTDTEKLQIAKRYLVRRQLEANGVKPEQVEVDDE 552
Query: 519 MVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRL 578
+K +I+ YTREAGVRNLER + R AV +AE A S + + P
Sbjct: 553 ALKAIIRAYTREAGVRNLEREVGRAVRHVAVGIAEGSVSHARISVDTLPEMLGP------ 606
Query: 579 ADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGI 638
P+ DE L RV+ PG+
Sbjct: 607 ----------------------------PIFEDEVAL----------------RVSVPGV 622
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
+ GL WT GG++ F+EAT + G+G L LTGQLGDV+KESAQ A + V++RA +L + E
Sbjct: 623 ATGLAWTPVGGDILFIEATRVPGRGGLILTGQLGDVMKESAQAAWSLVKSRAEELGIDPE 682
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
L D+H+H PAGA PKDGPSAGV + TALVSL + + VR DTAMTGE++LRGLV
Sbjct: 683 ----LFAKNDVHVHVPAGATPKDGPSAGVAMFTALVSLLTGRTVRKDTAMTGEISLRGLV 738
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LPVGG+K+K++AA R G+ RV+LP RN +D ++P LE + +R+++ + A E
Sbjct: 739 LPVGGIKEKVVAAARAGLTRVMLPARNRRDYEDIPQDARDRLEFVWLERVDEAMANALE 797
>gi|94986593|ref|YP_594526.1| ATP-dependent protease [Lawsonia intracellularis PHE/MN1-00]
gi|442555408|ref|YP_007365233.1| ATP-dependent protease La [Lawsonia intracellularis N343]
gi|302425061|sp|Q1MS21.1|LON_LAWIP RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|94730842|emb|CAJ54204.1| predicted ATP-dependent protease [Lawsonia intracellularis
PHE/MN1-00]
gi|441492855|gb|AGC49549.1| ATP-dependent protease La [Lawsonia intracellularis N343]
Length = 830
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 337/769 (43%), Positives = 470/769 (61%), Gaps = 75/769 (9%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GR+ +V +G+ R + Y TA + L+ + ++ EQ+ AL
Sbjct: 118 RLLKMPDGRLKALV--QGISRARCLTIHNEDGYLTATVELLQEPQPTVKPTEQE----AL 171
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
R + +++++ + TG VL +LAD+ A+ + EE +L ++
Sbjct: 172 LRYAREQCEKILAL--RGIPTGEIMGVLSNVNEPGRLADLIAANLRLKTEEAQEILQCLE 229
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS------KSQKEFLLRQQMRAIKEELG 232
RL LV HL AE T +V+ Q S K+QK++ LR+Q++AI++ELG
Sbjct: 230 PIDRL----HLVITHL--THEAEVATMQVKIQTSAREGMDKAQKDYFLREQLKAIRKELG 283
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D D ++++ + + AG+P+ + K V K+LRRL M R YL+ IA+LP
Sbjct: 284 DAIDADEEIEEVSSALNKAGLPAEVRKEVDKQLRRLSTMHADSAEAGVIRTYLDWIAELP 343
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W+K S++ LD+ AK L+ DHYGLV++K RI+EYL+VRKL P ++GP+LCF GPPGVG
Sbjct: 344 WKKTSKD-QLDIHKAKTILNEDHYGLVKIKDRILEYLSVRKLNPKSKGPILCFAGPPGVG 402
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSL SIA +LGRKF RISLGG+ DEA+IRGHRRTYIG+MPGRLI +K+ G NPV+L
Sbjct: 403 KTSLGRSIAKSLGRKFQRISLGGMHDEAEIRGHRRTYIGAMPGRLIQAMKQAGTKNPVIL 462
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK G+D RGDP+SALLE LDPEQN F+DHYLNVPFDLSKV+F+ TAN + IP
Sbjct: 463 LDEIDKLGNDFRGDPSSALLEALDPEQNHNFSDHYLNVPFDLSKVLFLCTANHLEHIPAA 522
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DR+E+I LPGYT +EKL IA ++++P+ L ++GL L I + ++ +I+ YTREAG
Sbjct: 523 LKDRLEIISLPGYTQQEKLAIARKYILPKQLKENGLKENELIISDTCLEKIIREYTREAG 582
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
+RN+ER + +L R A K AE ++
Sbjct: 583 LRNMEREIGSLCRKVARKKAEGKKP----------------------------------- 607
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
FRIT+ +EK LG PRF D + E+ PG+++GL WT GGE+
Sbjct: 608 --------PFRITT------NQIEKFLGIPRFIDDD-TEKTLPPGVALGLAWTPAGGEIL 652
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
++E + ++GKG L LTGQLGDV+KESAQ AL++ R++A+ L + + + DIHIH
Sbjct: 653 YIEVSTVKGKGNLLLTGQLGDVMKESAQAALSYARSKASSLNISP----DFAKSMDIHIH 708
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
PAGA PKDGPSAGVTL TAL+S + K VR D MTGE+TLRG VLPVGG+K+K+LA
Sbjct: 709 IPAGATPKDGPSAGVTLTTALISALTGKSVRGDLCMTGEITLRGRVLPVGGIKEKVLAGV 768
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
G+ VI+P +N KDL E+P + ++I +++VL AF P
Sbjct: 769 ARGLGHVIIPTKNTKDLEEIPQELKKKIKIHTVSHIDEVLPLAFSETIP 817
>gi|421074045|ref|ZP_15535087.1| ATP-dependent protease La [Pelosinus fermentans JBW45]
gi|392527842|gb|EIW50926.1| ATP-dependent protease La [Pelosinus fermentans JBW45]
Length = 773
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 315/762 (41%), Positives = 473/762 (62%), Gaps = 83/762 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARIS--------SLEMTKIEMEQVEQDPDF 115
P G T V++EGL R V + + +Y + +LE+ + + +
Sbjct: 81 PGG--TIRVLVEGLHRAEVIKYTDSENFYQVEVKEFDEPETRTLEIEALTRTAIAHFEQW 138
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ LS++ + + V+E+ GR L D+ + + E++ +LD
Sbjct: 139 VKLSKKIPPETLVSVVVVEEP----GR------------LTDLIASHLSLKIEDKQALLD 182
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+VD+K RL K E++ R ++ + + +KI+ +V Q+ K+QKE+ LR+Q++AI++ELG+ D
Sbjct: 183 AVDVKERLEKLCEILGREMEILELEKKISVRVRKQMEKTQKEYYLREQLKAIQKELGEKD 242
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D ++ K++ +P + + + KE+ RL+KM R YL+ + LPW K
Sbjct: 243 DRAAEVEEYRNKLKEQEVPKEVAEKINKEIERLEKMPAMVAESAVIRTYLDCLLALPWTK 302
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+E++ LD+ A++ L+ DHYGL +VK+RI+EYL++RKL +GP+LC VGPPGVGKTS
Sbjct: 303 ETEDM-LDVNNAEKILNEDHYGLEKVKERILEYLSIRKLTETMKGPILCLVGPPGVGKTS 361
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
LA SIA A+ RKF+R+SLGGV+DEA+IRGHRRTY+G++PGR+I G++ G NPV LLDE
Sbjct: 362 LARSIAKAMDRKFVRVSLGGVRDEAEIRGHRRTYVGALPGRIIQGIRTAGSKNPVFLLDE 421
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK +D RGDP++ALLEVLDPEQN TF+DHY+ VP+DLS+V++V TAN IP PLLD
Sbjct: 422 IDKMSADFRGDPSAALLEVLDPEQNNTFSDHYVEVPYDLSRVLWVVTANVMHTIPRPLLD 481
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
R+E+I +PGYT EEK+ I+ R+L+P+ + HGL + + + ++ +I YTRE+GVR
Sbjct: 482 RIEIINIPGYTEEEKVEISKRYLVPKQVRDHGLTDKQIVFSDTTLQKIIGDYTRESGVRG 541
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGES 594
LERN+A L R A ++ ++++ +++++H LG+P
Sbjct: 542 LERNIATLCRKVARQIVQEKRTNVKVTAQNLHTYLGAP---------------------- 579
Query: 595 THEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFV 654
+R T AER G+S GL WT GG+V +
Sbjct: 580 ------RYRHTQ-----------------------AERQPQVGVSTGLAWTEVGGDVLAI 610
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFP 714
E + M+GKG+L LTGQLG+V++ESAQ +++R RA +L + DG N + DIHIH P
Sbjct: 611 EVSVMKGKGKLLLTGQLGEVMRESAQAGFSYIRTRAQELGI---DG-NFQEETDIHIHLP 666
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
G +PKDGPSAG+++ TA+VS + + VR+D AMTGE+TLRG VLPVGG+K+K+LAAHR
Sbjct: 667 EGGIPKDGPSAGISMSTAVVSALTNRAVRSDVAMTGEITLRGRVLPVGGIKEKVLAAHRV 726
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GIK +I+P+ N +D+ E+PA V LE +L + M++VL+ A
Sbjct: 727 GIKTIIMPKENKRDIDEIPANVKKHLEFVLVEHMDEVLKAAL 768
>gi|167628600|ref|YP_001679099.1| ATP-dependent protease la [Heliobacterium modesticaldum Ice1]
gi|302425060|sp|B0TFI9.1|LON_HELMI RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|167591340|gb|ABZ83088.1| ATP-dependent protease la [Heliobacterium modesticaldum Ice1]
Length = 813
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 338/758 (44%), Positives = 457/758 (60%), Gaps = 75/758 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EGL R + E R+ E +E D S +
Sbjct: 87 PGG--TIRVLVEGLARAEILEYIDMEPLIRVRVR---------EHIEPD----VKSNAVE 131
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
A LI+ EQ K + + + V + +L D + + +++ +L+++D
Sbjct: 132 ALMRSLINQFEQYVKISKKIPPETFVSVVAVEDPGRLTDTISSHLTLKTQDKQRILEALD 191
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL TE++ R ++ + + KI +V Q+ K+QKE+ LR+Q++AI++ELG+ +D +
Sbjct: 192 VTERLEILTEILAREMEILELERKINVRVRKQMEKTQKEYYLREQIKAIQKELGEKEDRQ 251
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ L K+ A +P + + +E+ RL+KM P T R YL+ + LPW K ++
Sbjct: 252 AEGEDLRNKIAKAKLPKEVEEKALREVERLEKMPPMVAEATVVRNYLDWLLALPWAKQTK 311
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD+ A+ L+ DH+GL +VK+RIIEYLA+RKL +GP++CFVGPPGVGKTSLA
Sbjct: 312 D-RLDIDKAEAILNEDHFGLDKVKERIIEYLAIRKLAQKMKGPIICFVGPPGVGKTSLAR 370
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA AL RKF+R+SLGGV+DEA+IRGHRRTY+G+MPGRLI GL+ G NPV LLDEIDK
Sbjct: 371 SIARALERKFVRLSLGGVRDEAEIRGHRRTYVGAMPGRLIQGLRTAGSKNPVFLLDEIDK 430
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
D RGDPASALLEVLDPEQN TF+DH++ VPFDLSKV+F+ TAN IP PLLDRME
Sbjct: 431 MSMDFRGDPASALLEVLDPEQNSTFSDHFIEVPFDLSKVLFITTANGMHNIPRPLLDRME 490
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI +PGYT EEK RIA+ HL+P+ L +HGL E +QI E V+ +I+ YTREAGVRNLER
Sbjct: 491 VIYIPGYTEEEKTRIALDHLVPKQLKEHGLKKEQVQISENTVRRLIREYTREAGVRNLER 550
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A+L R +A + + + +
Sbjct: 551 EIASLCRKSARAIVKNPERR---------------------------------------- 570
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
L + L LG PRF AE + G++ GL WT GG+ +E
Sbjct: 571 ---------LSISAGNLPSYLGIPRF-RYGLAEAESQVGVATGLAWTETGGDTLAIEVAH 620
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
M GKG L LTG+LGDV+KESAQ +LT+VR+RA +L + N Q DIHIH P GA+
Sbjct: 621 MPGKGNLALTGKLGDVMKESAQASLTYVRSRARELGIAD----NFHQNTDIHIHVPEGAI 676
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+T+ TAL S SR+ VR + AMTGE+TLRG VLPVGG+K+K+LAA+R G
Sbjct: 677 PKDGPSAGITIATALTSALSRRPVRREVAMTGEITLRGRVLPVGGIKEKMLAANRAGCTT 736
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
VILP N KDL EVPA V L +L + M+ V+ +A
Sbjct: 737 VILPAENKKDLEEVPANVKKKLRFVLVEHMDQVIREAL 774
>gi|374312209|ref|YP_005058639.1| anti-sigma H sporulation factor LonB [Granulicella mallensis
MP5ACTX8]
gi|358754219|gb|AEU37609.1| anti-sigma H sporulation factor, LonB [Granulicella mallensis
MP5ACTX8]
Length = 810
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 324/678 (47%), Positives = 442/678 (65%), Gaps = 62/678 (9%)
Query: 147 LETVPIH-----KLADIFVASFE-ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVA 200
L+T+ I+ +L+D +S +S ++ +L++ D+K RL K + + ++ ++
Sbjct: 165 LQTIAINIEDSSRLSDFIASSLPFLSTTDKQELLETQDVKTRLEKINSHLAKEIEVQQLR 224
Query: 201 EKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKH 260
KI +V+ + +SQ+++ LR+QM+AI++ELGD DD + D+ L+ K+++AGMP ++ K
Sbjct: 225 NKIQTEVQDSVQQSQRDYYLREQMKAIQKELGDQDDTQKDIADLKEKIEAAGMPEDVKKD 284
Query: 261 VQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVR 320
KEL RL +M P Y+ +R Y+E +A LPW K S ++D+ A+ LD DHYGL +
Sbjct: 285 ALKELGRLGRMNPAAADYSLTRNYVEWLAVLPWSKGSAG-EVDIVHAQSVLDEDHYGLRK 343
Query: 321 VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEA 380
VK RI++YL+VR+LKPD +GP+LCFVGPPGVGKTSL SIA ALGRKF RISLGG+ DEA
Sbjct: 344 VKDRILDYLSVRRLKPDMKGPILCFVGPPGVGKTSLGRSIARALGRKFSRISLGGMHDEA 403
Query: 381 DIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQN 440
+IRGHRRTYIG++PG++I LKRV V +PV +LDEIDK G D RGDP+SALLE LDPEQN
Sbjct: 404 EIRGHRRTYIGALPGQIIQHLKRVEVNDPVFMLDEIDKLGRDFRGDPSSALLETLDPEQN 463
Query: 441 KTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIP 500
TF D+YL+ PFDLSKV+F+ TAN+ PIP PLLDRME+IEL GYT EEK+ IA ++LIP
Sbjct: 464 NTFRDNYLDQPFDLSKVLFICTANQLDPIPAPLLDRMEIIELTGYTEEEKVNIAEKYLIP 523
Query: 501 RVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQAL 560
R + ++G+ + ++ P V L+ + YTREAGVR LE+ + + R A KVAE E+ +
Sbjct: 524 RQIKENGISVDLIEFPTESVALIARHYTREAGVRRLEQLIGTVCRKLARKVAEGRTEKLV 583
Query: 561 PSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLG 620
+ + +H G +V +
Sbjct: 584 ITPEIIH---------EFLGGIKVRV---------------------------------- 600
Query: 621 PPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQ 680
D E AER G++VGL WT GG+V F+EA M+GKG +TGQ+GDV+KES Q
Sbjct: 601 -----DTEIAERTKRAGVAVGLAWTPAGGDVLFIEANKMKGKGGFSITGQIGDVMKESMQ 655
Query: 681 IALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRK 740
ALTWVR+ AT L L ++L+ D+HIH PAGA+PKDGPSAGVT+ TALVSL + K
Sbjct: 656 AALTWVRSNATSLGL----DEDVLKDIDLHIHVPAGAIPKDGPSAGVTMATALVSLLTDK 711
Query: 741 RVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE--VPAAVLA 798
VR AMTGE+TL G VLPVGG+K+K LAA R G++ VILP ++K VE + A +
Sbjct: 712 PVRPLLAMTGEITLSGNVLPVGGIKEKFLAAKRAGVRDVILP-IDVKSNVEEDLTADQVE 770
Query: 799 SLEIILAKRMEDVLEQAF 816
+ I A R+EDVL A
Sbjct: 771 GVTIHYASRIEDVLAVAL 788
>gi|392959646|ref|ZP_10325128.1| ATP-dependent protease La [Pelosinus fermentans DSM 17108]
gi|421052488|ref|ZP_15515477.1| ATP-dependent protease La [Pelosinus fermentans B4]
gi|421058671|ref|ZP_15521338.1| ATP-dependent protease La [Pelosinus fermentans B3]
gi|421066380|ref|ZP_15527994.1| ATP-dependent protease La [Pelosinus fermentans A12]
gi|421070556|ref|ZP_15531688.1| anti-sigma H sporulation factor, LonB [Pelosinus fermentans A11]
gi|392443219|gb|EIW20770.1| ATP-dependent protease La [Pelosinus fermentans B4]
gi|392448182|gb|EIW25385.1| anti-sigma H sporulation factor, LonB [Pelosinus fermentans A11]
gi|392456199|gb|EIW32953.1| ATP-dependent protease La [Pelosinus fermentans DSM 17108]
gi|392456272|gb|EIW33023.1| ATP-dependent protease La [Pelosinus fermentans A12]
gi|392460326|gb|EIW36641.1| ATP-dependent protease La [Pelosinus fermentans B3]
Length = 773
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 315/762 (41%), Positives = 472/762 (61%), Gaps = 83/762 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARIS--------SLEMTKIEMEQVEQDPDF 115
P G T V++EGL R V + + +Y + +LE+ + + +
Sbjct: 81 PGG--TIRVLVEGLHRAEVIKYTDSENFYQVEVKEFDEPETRTLEIEALTRTAIAHFEQW 138
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ LS++ + + V+E+ GR L D+ + + E++ +LD
Sbjct: 139 VKLSKKIPPETLVSVVVVEEP----GR------------LTDLIASHLSLKIEDKQALLD 182
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+VD+K RL K E++ R ++ + + +KI+ +V Q+ K+QKE+ LR+Q++AI++ELG+ D
Sbjct: 183 AVDVKERLEKLCEILGREMEILELEKKISVRVRKQMEKTQKEYYLREQLKAIQKELGEKD 242
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D ++ K++ P + + + KE+ RL+KM R YL+ + LPW K
Sbjct: 243 DRAAEVEEYRNKLKEQEFPKEVAEKINKEIERLEKMPAMVAESAVIRTYLDCLLALPWTK 302
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+E++ LD+ A++ L+ DHYGL +VK+RI+EYL++RKL +GP+LC VGPPGVGKTS
Sbjct: 303 ETEDM-LDVNNAEKILNEDHYGLEKVKERILEYLSIRKLTETMKGPILCLVGPPGVGKTS 361
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
LA SIA A+ RKF+R+SLGGV+DEA+IRGHRRTY+G++PGR+I G++ G NPV LLDE
Sbjct: 362 LARSIAKAMDRKFVRVSLGGVRDEAEIRGHRRTYVGALPGRIIQGIRTAGSKNPVFLLDE 421
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK +D RGDP++ALLEVLDPEQN TF+DHY+ VP+DLS+V++V TAN IP PLLD
Sbjct: 422 IDKMSADFRGDPSAALLEVLDPEQNNTFSDHYVEVPYDLSRVLWVVTANVMHTIPRPLLD 481
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
R+E+I +PGYT EEK+ I+ R+L+P+ + HGL + + + ++ +I YTRE+GVR
Sbjct: 482 RIEIINIPGYTEEEKVEISKRYLVPKQVRDHGLTDKQIVFSDTTLQKIIGDYTRESGVRG 541
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGES 594
LERN+A L R A ++ ++++ +++++H LG+P
Sbjct: 542 LERNIATLCRKVARQIVQEKRTNVKVTAQNLHTYLGAP---------------------- 579
Query: 595 THEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFV 654
+R T AER G+S GL WT GG+V +
Sbjct: 580 ------RYRHTQ-----------------------AERQPQVGVSTGLAWTEVGGDVLAI 610
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFP 714
E + M+GKG+L LTGQLG+V++ESAQ +++R RA +L + DG N + DIHIH P
Sbjct: 611 EVSVMKGKGKLLLTGQLGEVMRESAQAGFSYIRTRAQELGI---DG-NFQEETDIHIHLP 666
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
G +PKDGPSAG+++ TA+VS + + VR+D AMTGE+TLRG VLPVGG+K+K+LAAHR
Sbjct: 667 EGGIPKDGPSAGISMSTAVVSALTNRAVRSDVAMTGEITLRGRVLPVGGIKEKVLAAHRV 726
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GIK +I+P+ N +D+ E+PA V LE +L + M++VL+ A
Sbjct: 727 GIKTIIMPKENKRDIDEIPANVKRHLEFVLVEHMDEVLKAAL 768
>gi|313673592|ref|YP_004051703.1| ATP-dependent proteinase [Calditerrivibrio nitroreducens DSM 19672]
gi|312940348|gb|ADR19540.1| ATP-dependent proteinase [Calditerrivibrio nitroreducens DSM 19672]
Length = 780
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 322/760 (42%), Positives = 469/760 (61%), Gaps = 65/760 (8%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GRV +V +GL R ++E + ++ +I + + E E D AL
Sbjct: 83 RMLKLPDGRVKILV--QGLKRGEIEEFVQKEQFFKTKIKTFD----EEESPTSDLKVEAL 136
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPI-HKLADIFVASFEISFEEQLVMLDSV 177
R K +L + + +++T+ I KLADI A+ + E +L+ +
Sbjct: 137 IRYVKE---QLAKAVNLGKPMLPDLLAVIDTINIPGKLADIIAANLGLKTNEAQEILEKL 193
Query: 178 DLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDD 237
D RL++ ++ + R + + V KI +G++ KSQ+E+ L++Q++AI++ELGD DD
Sbjct: 194 DFVERLNRVSQFLTREISILEVQNKILSDAKGEIDKSQREYFLKEQLKAIRKELGDEDDL 253
Query: 238 EDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKAS 297
++ E K++ MP + + K+L+RL +M T R +LE I +LPW K +
Sbjct: 254 SKEVEEFEEKLKKLKMPKEVKEEATKQLKRLSRMHSDSAEATVVRTFLEWIVELPWGKYT 313
Query: 298 EEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLA 357
++ +LD++ AK+ L+ DHYGL VK RI+++LAVRKL + P++CFVGPPGVGKTSL
Sbjct: 314 KD-NLDIENAKKVLEEDHYGLEEVKDRILDFLAVRKLNSKMKSPIICFVGPPGVGKTSLG 372
Query: 358 SSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEID 417
SIA A+GRKF+RISLGG++DEA+IRGHRRTYIG++PG++I GL+ G NPV +LDEID
Sbjct: 373 RSIARAMGRKFVRISLGGLRDEAEIRGHRRTYIGALPGKIIQGLRNAGSSNPVFMLDEID 432
Query: 418 KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRM 477
K GSD RGDP+SALLEVLDPEQN F DHYL VP+DLSKV+F+ TAN PIPP L DRM
Sbjct: 433 KLGSDFRGDPSSALLEVLDPEQNNAFVDHYLGVPYDLSKVMFITTANYLDPIPPALKDRM 492
Query: 478 EVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLE 537
E+I +PGY EEK++IA ++L+PR + ++GL + L I + ++ +I YTRE+G+RNLE
Sbjct: 493 EIIHIPGYIEEEKIQIAKKYLVPRQIVENGLKPDQLFITDKILSFIISGYTRESGLRNLE 552
Query: 538 RNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHE 597
R + + R A +VA E +
Sbjct: 553 RLVGTICRKVARRVATGEDK---------------------------------------- 572
Query: 598 VSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEAT 657
F+IT V+ K LGP ++ + + + GI GL WT +GG+V F+E+
Sbjct: 573 ---IFKITKNNVI------KYLGPVKYYEEDELKENEV-GIVTGLAWTPYGGDVLFIESA 622
Query: 658 AMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGA 717
+GKG L LTGQLGDV+KESA+ ALT+VR+ A + + L + DIH+H PAGA
Sbjct: 623 KYKGKGNLVLTGQLGDVMKESARAALTFVRSIAEKYNIEPK----LFEEHDIHLHVPAGA 678
Query: 718 VPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIK 777
+PKDGPSAG+T+ TA+ SLFS K+V+ D AMTGE+T+ G VLP+GG+K+K+LAA R GIK
Sbjct: 679 IPKDGPSAGITMATAIFSLFSGKKVKKDVAMTGEITITGKVLPIGGLKEKLLAAKRLGIK 738
Query: 778 RVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
V++P++N DL+++ + + +I +R E+VL A E
Sbjct: 739 TVVIPKKNENDLIKLSKDLKKGIHVIPVERFEEVLRIAIE 778
>gi|196003460|ref|XP_002111597.1| hypothetical protein TRIADDRAFT_50226 [Trichoplax adhaerens]
gi|190585496|gb|EDV25564.1| hypothetical protein TRIADDRAFT_50226 [Trichoplax adhaerens]
Length = 655
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 298/515 (57%), Positives = 385/515 (74%), Gaps = 35/515 (6%)
Query: 282 RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGP 341
R YLE + DLPW+K++E+ LD+ AK LD DH+G+ +K+R++EYLAVR+L+ D +GP
Sbjct: 167 RNYLEWMVDLPWKKSTED-KLDINKAKVDLDDDHFGMKELKKRVLEYLAVRQLRNDLKGP 225
Query: 342 VLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 401
+LCFVGPPGVGKTS+ SIA LGR+F+RISLGGV D+++IRGHRRTYIGSMPGR+I GL
Sbjct: 226 ILCFVGPPGVGKTSVGRSIAKTLGREFLRISLGGVSDQSEIRGHRRTYIGSMPGRIIQGL 285
Query: 402 KRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVA 461
K +GV NPV LLDE+DK + GDPA+ALLEVLDPEQN TF DHYLNVPFDLS+V+F+A
Sbjct: 286 KNIGVNNPVFLLDEVDKLSKGIHGDPAAALLEVLDPEQNNTFTDHYLNVPFDLSQVMFIA 345
Query: 462 TANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVK 521
TAN IP LLDRMEVIE+PGYT EEK+ I RHL+ + L QHGL ++ L+IP +K
Sbjct: 346 TANTLHTIPSALLDRMEVIEVPGYTQEEKVEIGARHLVAKQLTQHGLRNDQLEIPSETIK 405
Query: 522 LVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADG 581
+++ RYTREAGVR+LER L A+ RAAA+K+AE+ + +KD ++ P
Sbjct: 406 VIVSRYTREAGVRSLERKLGAICRAAAIKIAERSIGTSEDRNKD--KIKEP--------- 454
Query: 582 AEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVG 641
+ H+ S+ I++ +VVDE+ L+++LGP + + EA++R+ +PGI+VG
Sbjct: 455 ------------AIHQSSD---ISNSIVVDESALKEILGPHIY-EHEASQRLTSPGIAVG 498
Query: 642 LVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGM 701
L WT GGE+ FVEA+ M G G+L LTGQLGDV++ESA +ALTW+++ + + M
Sbjct: 499 LAWTPMGGEILFVEASKMIGDGKLKLTGQLGDVMRESAYLALTWLKSHPDQIL----ESM 554
Query: 702 NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPV 761
N L DIHIHFPAGAV KDGPSAG+T+ T LVSLFS K VR+DTAMTGE+TLRG VLPV
Sbjct: 555 NKL---DIHIHFPAGAVEKDGPSAGITITTVLVSLFSAKCVRSDTAMTGEITLRGQVLPV 611
Query: 762 GGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAV 796
GG+K+K LAAHR GIKRVI+P+RNLKDL +VP V
Sbjct: 612 GGIKEKSLAAHRAGIKRVIIPQRNLKDLEDVPENV 646
>gi|320103286|ref|YP_004178877.1| ATP-dependent proteinase [Isosphaera pallida ATCC 43644]
gi|319750568|gb|ADV62328.1| ATP-dependent proteinase [Isosphaera pallida ATCC 43644]
Length = 925
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 319/663 (48%), Positives = 427/663 (64%), Gaps = 55/663 (8%)
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LAD+ A+ +S E+++ +L + D+ RL K + R L + ++ K+ +V ++++
Sbjct: 275 LADLLAANLNLSVEDRIELLGTTDVVDRLKKLVGHLTRQLDVLELSSKLHAQVGSEMNRV 334
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
Q+E LRQQ+R I+EELG++D + ++ L K++ A P + +++L RL M P
Sbjct: 335 QREHFLRQQIRIIQEELGESDKENTEVEELWNKLEKAKPPKEVLVECKRDLDRLANMHPS 394
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
++ R +L+ IA LPW K++ + L+LK A+ LD+DHY L +VKQRI+EYLAVRKL
Sbjct: 395 SAEHSIVRTHLDWIASLPWSKSTRD-RLNLKVARRILDADHYNLEKVKQRILEYLAVRKL 453
Query: 335 KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
+GP+LC VGPPG GKTSL SIA LGR+F+RISLGGV DEA+IRGHRRTY+ +MP
Sbjct: 454 CKSLKGPILCLVGPPGTGKTSLGKSIARTLGREFVRISLGGVHDEAEIRGHRRTYVAAMP 513
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
GR+I GL++ G NPVM+LDE+DK D RGDPA+ALLEVLDPEQNKTF DHYL+ FDL
Sbjct: 514 GRIIQGLRKCGTNNPVMMLDEVDKLSHDFRGDPAAALLEVLDPEQNKTFRDHYLDHDFDL 573
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
SK++F+ATAN + IP L DRMEV+ELPGY+ EEKL IA R+LIP+ L +HGL ++
Sbjct: 574 SKILFLATANALETIPHALRDRMEVLELPGYSEEEKLLIAHRYLIPKQLAEHGLAPRDVK 633
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLL 574
P+ V+ VI YTREAG+RNLER LAA+ R AVK AE +
Sbjct: 634 FPDDTVRKVIVDYTREAGLRNLERELAAICRKVAVKHAEGD------------------- 674
Query: 575 DNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVA 634
T L + A + + LGPP+F REAA++
Sbjct: 675 ------------------------------TRNLTITPANVTEWLGPPKF-FREAADQKP 703
Query: 635 APGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQ 694
PG+S GL WT GGE+ F+EATA GKG L LTG LGD ++ESAQ A++++++ A L
Sbjct: 704 TPGLSTGLAWTPSGGEILFIEATANPGKGSLTLTGLLGDSMRESAQAAMSYLKSHAASLA 763
Query: 695 LVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTL 754
+ N D+HIH PAGAVPKDGPSAGV +V ALVSL+ +R AMTGE+TL
Sbjct: 764 I----DPNRFDKADVHIHVPAGAVPKDGPSAGVAIVAALVSLWREMPIRPGLAMTGEVTL 819
Query: 755 RGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQ 814
G VLPVGGV++K+LAA R G++ VILP RN KDL E+P V L I L +++VL +
Sbjct: 820 TGRVLPVGGVREKVLAARRSGVREVILPIRNEKDLTELPPEVRQDLVIHLVAHLDEVLPR 879
Query: 815 AFE 817
FE
Sbjct: 880 LFE 882
>gi|392375665|ref|YP_003207498.1| ATP-dependent protease La [Candidatus Methylomirabilis oxyfera]
gi|258593358|emb|CBE69697.1| ATP-dependent protease La [Candidatus Methylomirabilis oxyfera]
Length = 856
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 329/771 (42%), Positives = 470/771 (60%), Gaps = 85/771 (11%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF- 115
+ R ++ P GRV V+++GL R V + R Y+ ARI+ + T + VE +
Sbjct: 110 IMRMLKMPDGRVK--VLVQGLSRAKVVGIERREPYFEARITEVPETDLVTSGVEAEAMIR 167
Query: 116 ---------IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEIS 166
+AL +Q + + +I+ LE GR LAD+ + ++
Sbjct: 168 SVKELVGKGVALGKQISSDVVVIINNLEHP----GR------------LADLVASHLDLK 211
Query: 167 FEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRA 226
E+ +L+ D RL + +EL+ + L+ + V +I + ++ K+ +E+ LR+Q++A
Sbjct: 212 MEQAQEVLELFDPTQRLKRVSELLSKELEVLEVQHRIQSQAREEMDKTHREYYLREQLKA 271
Query: 227 IKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLE 286
I++ELG+ DD +L LE+K++ A MP + + +L RL +M P + R YL+
Sbjct: 272 IQKELGETDDRNQELQELEQKIRKAKMPEAVESEAKGQLGRLSRMHPDAAEASVIRTYLD 331
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
+ +LPW + +++ L +K A + L+ DHY L +VK+RI+EYLAVRKLK +GP+LCFV
Sbjct: 332 WLIELPWSRPTKD-KLSIKQASKILNEDHYDLEKVKERILEYLAVRKLKKKMKGPILCFV 390
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTSL SIA ALGRKFIRISLGGV+DEA+IRGHRRTYIG++PGR+I G+K+ G
Sbjct: 391 GPPGVGKTSLGRSIARALGRKFIRISLGGVRDEAEIRGHRRTYIGALPGRVIQGIKQAGS 450
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NPV ++DE+DK G+D RGDP+SALLEVLDPEQN +F+DHYL VPFDLS V+F+ TAN A
Sbjct: 451 NNPVFMIDEVDKVGTDFRGDPSSALLEVLDPEQNYSFSDHYLGVPFDLSNVMFICTANLA 510
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
PI L DR+E+I++ GYT EEKL IA R+L+PR +HG+ + L I + + +I
Sbjct: 511 DPIISALRDRLEIIDISGYTEEEKLHIAKRYLVPRQYREHGIDEKRLLITDEAILKMINE 570
Query: 527 YTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVE 585
YTREAG+RNLER +A + R A VAE ++ Q ++ + R LG+P
Sbjct: 571 YTREAGLRNLEREVATVCRKVARLVAEGQKGQTKVTAAVLQRFLGAP------------- 617
Query: 586 MEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWT 645
K L P D E G++ GL WT
Sbjct: 618 -------------------------------KFLADPEQDADEI-------GVATGLAWT 639
Query: 646 NFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQ 705
GG++ ++E + +RGKG L LTG LG+V+KESAQ AL++ R+R+ DL + +D ++
Sbjct: 640 QTGGDIIYIECSILRGKGSLSLTGHLGEVMKESAQAALSYARSRSADLGI--KD--DVFT 695
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
DIH+H PAGA+PKDGPSAG+T+ AL+S ++ VR D AMTGE+TLRG VLP+GG+K
Sbjct: 696 KYDIHVHVPAGAIPKDGPSAGITMAVALLSALTKVPVRRDVAMTGEVTLRGKVLPIGGIK 755
Query: 766 DKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+K LAA R GI V++P RN KD+ E+PA V +E + M+ VLE A
Sbjct: 756 EKALAARRMGIHTVVVPARNDKDIKELPANVKRGMEFVFVDHMDQVLEIAL 806
>gi|162451110|ref|YP_001613477.1| ATP-dependent protease La [Sorangium cellulosum So ce56]
gi|302425111|sp|A9GBF1.1|LON2_SORC5 RecName: Full=Lon protease 2; AltName: Full=ATP-dependent protease
La 2
gi|161161692|emb|CAN92997.1| ATP-dependent protease La [Sorangium cellulosum So ce56]
Length = 804
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 334/776 (43%), Positives = 481/776 (61%), Gaps = 74/776 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G AR + + R G Y VVL GL RF V+ + Y ARI +
Sbjct: 78 YSVGTVARVVKVIR-----LGPNNYSVVLNGLGRFRVKSAFSLEPYMRARIERIP----- 127
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQ-KQKTGGRTKVLLETVPIHKLADIFVASF- 163
E + +D + AL + E++ ++ + T G +L LAD+ ++F
Sbjct: 128 -ESLVRDVELEALGAGLREATREVLGLMPNLPRDTAG---ILDNVREPGALADLIASNFP 183
Query: 164 --EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLR 221
+ S ++ +L++ D+K R+ +V R L+ +RV ++I+ V+ ++ KSQ+E++LR
Sbjct: 184 QAQASVGDKQEILEAFDVKARVRLVLAMVGRQLEVLRVKKEISSMVQEEMGKSQREYILR 243
Query: 222 QQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS 281
QQM++IKEELG+ DD D++ L +++ A +P+ + K V+K+L RL+ M Q + +
Sbjct: 244 QQMKSIKEELGEGGDD-DEIEELRERIRRAKVPAEVDKVVRKQLSRLRSMAQQSAEFNVT 302
Query: 282 RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGP 341
+ YLE IADLPW K + + L +++ + LD DH GL +VK+RI+EY A+R+L+ D +GP
Sbjct: 303 KTYLEWIADLPWSKTTVD-KLSVESVRRCLDEDHLGLEKVKKRIVEYSAIRQLRTDKKGP 361
Query: 342 VLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 401
+L F+GPPGVGKTSL SIA ++GR++ RI+LGGV+DEA+IRGHRRTY+G++PGR++ L
Sbjct: 362 ILLFIGPPGVGKTSLGKSIARSMGRRYERIALGGVRDEAEIRGHRRTYVGALPGRILQAL 421
Query: 402 KRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVA 461
K+ G NPV++LDE+DK G D+RGDPA+ALLEVLDPEQN TF DHYL++PFDLS+V+F+A
Sbjct: 422 KKAGTKNPVLVLDEVDKMGVDLRGDPAAALLEVLDPEQNSTFQDHYLDLPFDLSQVMFLA 481
Query: 462 TANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVK 521
TAN IP PL+DRMEVIE+PGYT +KL IA L+P+ L HGL E L+ E ++
Sbjct: 482 TANNWDGIPGPLVDRMEVIEVPGYTRTDKLGIAREFLVPKQLSAHGLTDERLEFTEPGIE 541
Query: 522 LVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADG 581
V+ YTREAGVR LER +AA+ RA AVKVAE DV + +P
Sbjct: 542 AVVDHYTREAGVRGLERQIAAVCRATAVKVAE---------GNDVREVATP--------- 583
Query: 582 AEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVG 641
+E+VLGP + E AER PG++ G
Sbjct: 584 -------------------------------EHVEQVLGPHKHRP-EIAERTLQPGVATG 611
Query: 642 LVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGM 701
L WT GGE+ F+EAT M GKG + LTG + +V++ESA A+++VR++A L L E
Sbjct: 612 LAWTPAGGEILFIEATKMPGKGNVVLTGNMRNVMQESASTAVSFVRSKADRLHLDPE--- 668
Query: 702 NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPV 761
L+ D+H+H P PKDGPSAGVT+ A+ SL VR+D AMTGE++LRG V+PV
Sbjct: 669 -WLKEIDLHVHIPQHGTPKDGPSAGVTMFAAVASLLLGAPVRSDVAMTGEISLRGRVMPV 727
Query: 762 GGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GGVK+K+LAAHR GI+ V++P +N +DL +VP V ++I + ME++L E
Sbjct: 728 GGVKEKLLAAHRAGIRHVLIPAKNRRDLEDVPQDVKDQIKITMVSSMEEILPLVLE 783
>gi|148679081|gb|EDL11028.1| RIKEN cDNA 1300002A08, isoform CRA_c [Mus musculus]
Length = 526
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 294/532 (55%), Positives = 391/532 (73%), Gaps = 19/532 (3%)
Query: 302 LDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA 361
LD++AA+ LD+DHY + ++K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A
Sbjct: 4 LDIRAARILLDNDHYAMEKLKRRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVA 63
Query: 362 SALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGS 421
LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G
Sbjct: 64 KTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGK 123
Query: 422 DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIE 481
++GDPA+ALLEVLDPEQN F DHYLNV FDLS+V+F+ATAN IPP LLDRME+I+
Sbjct: 124 SLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTTATIPPALLDRMEIIQ 183
Query: 482 LPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLA 541
+PGYT EEK+ IA RHLIP+ L+QHGL + +QIP+ +I RYTREAGVR+L+R
Sbjct: 184 VPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQHTTLAIITRYTREAGVRSLDRKFG 243
Query: 542 ALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNT 601
A+ RA AVKVAE + ++A DV ADG + V+ + +S+T
Sbjct: 244 AICRAVAVKVAEGQHKEAKLDRSDV------------ADGEGCKEHVLEDAKP-ESISDT 290
Query: 602 FRIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEAT 657
+ P+++D L+ +LGPP + + E +ER++ PG+++GL WT GG++ FVEA+
Sbjct: 291 ADLALPPEMPILIDSHALKDILGPPLY-ELEVSERLSQPGVAIGLAWTPLGGKIMFVEAS 349
Query: 658 AMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAG 716
M G+G+L LTGQLGDV+KESA +A++W+R+ A L G +LL DIH+HFPAG
Sbjct: 350 RMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYHLTNAFGSFDLLDNTDIHLHFPAG 409
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
AV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+
Sbjct: 410 AVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGL 469
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSKL 828
K++I+P+RN KDL E+P+ V L + A +++VL AF+GG P + L
Sbjct: 470 KQIIIPQRNEKDLEEIPSNVRQDLSFVTASCLDEVLNAAFDGGFPVKTRPGL 521
>gi|212702187|ref|ZP_03310315.1| hypothetical protein DESPIG_00198 [Desulfovibrio piger ATCC 29098]
gi|212674392|gb|EEB34875.1| endopeptidase La [Desulfovibrio piger ATCC 29098]
Length = 835
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 342/780 (43%), Positives = 474/780 (60%), Gaps = 87/780 (11%)
Query: 50 VAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQV 109
A + + R ++ P GR+ +V +G R V+ Y ARI T ++ E
Sbjct: 112 TAGTVVQVMRMLKMPDGRIKILV--QGASRARVEGYHRVDPYLEARI-----TVLQEETP 164
Query: 110 EQDPDFIALSR----------QFKATAM-ELISVLEQKQKTGGRTKVLLETVPIHKLADI 158
+D AL R Q + A ++++VL+ ++ G +LAD+
Sbjct: 165 PRDAKIEALLRSAREQSEKVLQLRGVASPDILAVLQGVEEPG-------------RLADL 211
Query: 159 FVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEF 218
A+ + E +L++V+ RL ++R ++ + I + K+QKE+
Sbjct: 212 IAANLRMKTAEAQRILEAVNPVERLMLVNIQLEREVEVATMQAHIQSTAREGIDKAQKEY 271
Query: 219 LLRQQMRAIKEELGDN-DDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
LR+Q++AI+ ELGD + E++L L + + AG+P ++ K K+LRRL M
Sbjct: 272 FLREQIKAIRHELGDAASEGEEELDELRKALDKAGLPKDVRKEADKQLRRLSGMHADSSE 331
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + +LPW+K S + LD+ AK LD DHYGL ++K RI+E+L+VRKL P
Sbjct: 332 ANVVRTYLDWLVELPWKKLSRD-RLDIAHAKAILDEDHYGLDKIKDRILEFLSVRKLNPQ 390
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
++GP+LCF GPPGVGKTSL SIA ALGR F R+SLGG+ DEA+IRGHRRTYIG+MPGR+
Sbjct: 391 SKGPILCFAGPPGVGKTSLGRSIARALGRHFQRLSLGGMHDEAEIRGHRRTYIGAMPGRI 450
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
I +K+ G NPV++LDE+DK GSD RGDP+SALLEVLDPEQN TF+DHYLNVPFDLSKV
Sbjct: 451 IQAIKQAGTRNPVIVLDEVDKLGSDFRGDPSSALLEVLDPEQNHTFSDHYLNVPFDLSKV 510
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+F+ TAN + IP PL DRMEVI LPGYT +EK+ IA RHL+P+ + ++GL + + +
Sbjct: 511 MFLCTANHLETIPAPLRDRMEVISLPGYTMQEKVEIAKRHLLPKKVTENGLREGDVIMDD 570
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+ VI+ YTREAG+RNLER L ++ R A + AE ++
Sbjct: 571 TALTAVIRGYTREAGLRNLERELGSICRKLARQRAEGKK--------------------- 609
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
+F + S +V EK+LG PRF + E +R+ PG
Sbjct: 610 ----------------------GSFTVDSAVV------EKLLGAPRFIEDEKDKRL-MPG 640
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+++GL WT GGEV +E M+GKG L LTGQLGDV+KESA+IA++ +R+RA L + A
Sbjct: 641 MALGLAWTPAGGEVLTIECACMKGKGNLQLTGQLGDVMKESARIAMSHIRSRADSLGIDA 700
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
+ +DIHIH PAGAVPKDGPSAGVTL +AL+S S + VRADT MTGE+TL+G
Sbjct: 701 ----DFSDTQDIHIHVPAGAVPKDGPSAGVTLTSALISALSGRIVRADTCMTGEITLQGR 756
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VLPVGG+K+KILA G+K VI+P +N+KDL EVP +L +++ A +DVL AFE
Sbjct: 757 VLPVGGIKEKILAGVARGLKHVIIPSQNVKDLEEVPKELLKKIKVHPAHTYDDVLALAFE 816
>gi|83589395|ref|YP_429404.1| Lon-A peptidase [Moorella thermoacetica ATCC 39073]
gi|83572309|gb|ABC18861.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Moorella thermoacetica ATCC 39073]
Length = 768
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 312/663 (47%), Positives = 428/663 (64%), Gaps = 55/663 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ + + ++ +L++VD+K RL+ +++ + + + + KI+ +V Q+ K
Sbjct: 158 RLADVVASHLNLKLTDKQAVLEAVDIKTRLNILCDILAKEKEILELERKISLRVRKQMEK 217
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+ LR+Q++AI++ELG+ DD + L ++ A +P I + KE+ RL+KM P
Sbjct: 218 AQKEYYLREQIKAIQKELGEKDDRVAEAEELRERIAKARLPKEIRERALKEVERLEKMPP 277
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R YL+ I LPW K + + LD+K A+E LD DHYGL VK+RI+EYLA+R+
Sbjct: 278 MVAEVTVVRNYLDWILALPWHKQTRD-RLDIKVAEEILDEDHYGLKEVKERILEYLAIRQ 336
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L RGP+LCFVGPPGVGKTSLA SIA AL RKF+RISLGG +DEA+IRGHRRTY+G++
Sbjct: 337 LAKKMRGPILCFVGPPGVGKTSLAKSIARALQRKFVRISLGGTRDEAEIRGHRRTYVGAL 396
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I G+K+ G NPV LLDEIDK SD RGDPASALLEVLDPEQN F+DHY+ PFD
Sbjct: 397 PGRIIQGMKQAGTKNPVFLLDEIDKLSSDFRGDPASALLEVLDPEQNYMFSDHYIEAPFD 456
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+F+ TAN IP PLLDRMEVI +PGYT EEK++IA HL+P+ L++HGL + L
Sbjct: 457 LSKVMFITTANVEYSIPRPLLDRMEVIRIPGYTEEEKVKIAELHLLPKQLEEHGLKKQQL 516
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
++ E ++ +++ YTREAGVRNLER +A + R A + + + ++ +V
Sbjct: 517 EVSENALRRIVREYTREAGVRNLEREIATICRKTARDIVSGKTKAVKVTANNV------- 569
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
E+ LG PRF +A R
Sbjct: 570 ------------------------------------------EQYLGIPRFHHTQAI-RN 586
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL WT GGEV VE + ++GKG L LTG+LGDV+KESA +++R+RA +L
Sbjct: 587 EMVGVVNGLAWTEVGGEVLNVEVSILKGKGNLTLTGKLGDVMKESAYAGFSYLRSRAAEL 646
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
L ED + D+HIH P GA+PKDGPSAG+T+ TA+ S VR+D AMTGE+T
Sbjct: 647 GL-EED---FHEKFDLHIHVPEGAIPKDGPSAGITMATAMASALKGVPVRSDLAMTGEIT 702
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLPVGG+K+KILAAHR GIK +ILP N K+L ++PA + + IL + M++VL+
Sbjct: 703 LRGRVLPVGGIKEKILAAHREGIKNIILPRENEKNLEDIPANIKRKMNFILVEHMDEVLK 762
Query: 814 QAF 816
+A
Sbjct: 763 EAL 765
>gi|297616505|ref|YP_003701664.1| ATP-dependent protease La [Syntrophothermus lipocalidus DSM 12680]
gi|297144342|gb|ADI01099.1| ATP-dependent protease La [Syntrophothermus lipocalidus DSM 12680]
Length = 798
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 334/768 (43%), Positives = 467/768 (60%), Gaps = 73/768 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EGL R +Q I K+ +++ ++ PD A + +
Sbjct: 85 PGG--TMRVLVEGLNRAEIQ----------GYIFFEPFIKVGIKEFKEYPDRKA--PEIE 130
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
A LI EQ K + + ++ V I +LAD+ + + E+ +L+S+D
Sbjct: 131 ALMRTLIYQFEQYVKMSKKIPPETVVSVVAIEEPGRLADVVASHLSLRVHEKQAILESLD 190
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+K RL E++ + ++ + + KI +V Q+ K+QKE+ LR+QM+AI++ELG+ D+
Sbjct: 191 VKKRLEILCEILAKEMEVLELERKINIRVRKQMEKTQKEYYLREQMKAIQKELGEKDERV 250
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ L K+ A +P I + KE+ RL+KM P R YL+ + +PW + +
Sbjct: 251 AEGEELREKIAQAKLPPEIEEKALKEVERLEKMPPMVAEAVVVRNYLDWLLSMPWSQETR 310
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LDL A++ LD DHYGL + K+RI+EYLA+RKL +GP+LCF+GPPGVGKTSL
Sbjct: 311 D-RLDLDVAQKILDEDHYGLTKPKERILEYLAIRKLARKMKGPILCFIGPPGVGKTSLGK 369
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA ALGRKF+R+SLGG++DEA+IRGHRRTY+GS+PGR+I G+K+ G NPV LLDE+DK
Sbjct: 370 SIARALGRKFVRMSLGGIRDEAEIRGHRRTYVGSLPGRIIQGMKQAGTKNPVFLLDEVDK 429
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
SD RGDPASALLEVLDPEQN F+DHYL VPFDLSKV+F+ TAN IP PLLDRME
Sbjct: 430 MSSDFRGDPASALLEVLDPEQNHMFSDHYLEVPFDLSKVMFITTANSPYSIPRPLLDRME 489
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI + GYT EEK RIA+ +L+P+ + +HGL + + E ++ +I++YTREAGVRNLER
Sbjct: 490 VIYISGYTEEEKTRIALDYLVPKQIKEHGLKKKNIGFSEGAIRKIIRQYTREAGVRNLER 549
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A +V +AD
Sbjct: 550 EIATICRKVAREV--------------------------VADK----------------- 566
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
+ + R+TS V EK R+ E +V G++ G+ WT GG+ VE
Sbjct: 567 NKSVRVTSNSVPTFLGAEKY----RYGTAEKENQV---GVATGMAWTETGGDTLSVEVAL 619
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ G G+L +TG LGD++KESAQ +L++VR++A +L + D + D+H+H P GA+
Sbjct: 620 LPGTGKLTMTGHLGDIMKESAQASLSYVRSKAGELGITESD---FHEKYDVHLHVPEGAI 676
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+ L TAL S FS++ VR+D AMTGE+TLRG VLPVGG+K+K+LAAHR GI
Sbjct: 677 PKDGPSAGIALATALASAFSKRPVRSDVAMTGEITLRGRVLPVGGIKEKVLAAHRAGITT 736
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHS 826
VILP N KDL EVPA V ++ +L M+ VLE+A G P + S
Sbjct: 737 VILPAENKKDLEEVPANVKKKMDFVLVDHMDQVLEKALVRGMPEAKES 784
>gi|297568715|ref|YP_003690059.1| ATP-dependent protease La [Desulfurivibrio alkaliphilus AHT2]
gi|296924630|gb|ADH85440.1| ATP-dependent protease La [Desulfurivibrio alkaliphilus AHT2]
Length = 821
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 332/753 (44%), Positives = 467/753 (62%), Gaps = 75/753 (9%)
Query: 70 YIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMEL 129
Y V++ + + + E + Y AR+ + M + M+Q E + + + QFK A
Sbjct: 136 YQVLISAVKKLRIVEYTQHTPYLQARVEVVPMEE-SMDQ-ESEAMLLNIRNQFKKMA--- 190
Query: 130 ISVLEQKQKTGGRTKVLLETV-----PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLS 184
GG K L TV P + +A + V+ +S EE+ +L+ DLK L+
Sbjct: 191 --------DLGGVPKELGMTVAALTNPFY-IAYLVVSQVGLSMEEEEAVLEIEDLKALLN 241
Query: 185 KATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVAL 244
+ +++ L+++ ++ KI + ++ + K Q+EF LR+Q++AI++ELG+ DD+ DL L
Sbjct: 242 RVGHELNKKLETLEMSHKIQKGIKQDMDKKQREFFLREQLKAIRKELGE-DDENIDLKDL 300
Query: 245 ERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDL 304
+++++ +P K +KEL RL ++ P P YT SR YL+ + DLPW+ +E+ +LDL
Sbjct: 301 RERLEASDLPEEPKKTAEKELDRLNRISPSSPEYTVSRTYLDWLIDLPWQTCTED-NLDL 359
Query: 305 KAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASAL 364
K A+E LD+DHYGL +K+RIIE+LAVRKLK D GP+LCF GPPGVGKTSL SIA ++
Sbjct: 360 KRAQEVLDADHYGLDDIKKRIIEFLAVRKLKHDMHGPILCFAGPPGVGKTSLGQSIARSM 419
Query: 365 GRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVR 424
GRKF+RISLGGV+DEA+IRGHRRTYIG++PGR+I L++ G CNP+ +LDEIDK G D R
Sbjct: 420 GRKFVRISLGGVRDEAEIRGHRRTYIGALPGRIIQSLRKAGSCNPLFMLDEIDKLGMDFR 479
Query: 425 GDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPG 484
GDP+SALLEVLDPEQN +F+DHYL +PFDLS+V+F+ TAN IP PL DRMEVIEL G
Sbjct: 480 GDPSSALLEVLDPEQNFSFSDHYLEIPFDLSRVMFITTANLLDNIPGPLRDRMEVIELSG 539
Query: 485 YTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALA 544
YT EEK+ IA RHL+P+ L+ H + + L++ + + +I+ YTREAGVRNLER + +
Sbjct: 540 YTEEEKMHIARRHLVPKQLEAHAISEDDLRLSDQALAGIIRSYTREAGVRNLERKIGGVC 599
Query: 545 RAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRI 604
R A K+ E G +EV P
Sbjct: 600 RGVARKIVE---------------------------GHSGLIEVGP-------------- 618
Query: 605 TSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGE 664
D+ L + LGPP+F E+ R PG++ GL WT GG++ F+E M+GKG
Sbjct: 619 ------DD--LAEYLGPPQFFS-ESKARTWGPGLATGLAWTPVGGDLLFIETARMKGKGN 669
Query: 665 LHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPS 724
L LTG+LG+V+KESA ALT++R+ L L + D+H+H P GA+PKDGPS
Sbjct: 670 LSLTGKLGEVMKESANAALTYIRSHTDKLGL----DEKIFADNDLHVHVPEGAIPKDGPS 725
Query: 725 AGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPER 784
AGV +V +L S + VR + AMTGE+TLRG VLPVGG+K+K+LAA R I VILP+
Sbjct: 726 AGVAMVVSLASQLMGRPVRREVAMTGEITLRGDVLPVGGIKEKVLAAVRADISEVILPKL 785
Query: 785 NLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
N KDL E+P + ++ L + + LE+A E
Sbjct: 786 NEKDLTELPESARKKVKFHLVHDINEALEKALE 818
>gi|451946017|ref|YP_007466612.1| ATP-dependent protease La [Desulfocapsa sulfexigens DSM 10523]
gi|451905365|gb|AGF76959.1| ATP-dependent protease La [Desulfocapsa sulfexigens DSM 10523]
Length = 801
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 304/663 (45%), Positives = 424/663 (63%), Gaps = 54/663 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ ++ + E +L+ D RL +L+ + L+ V KI + ++SK
Sbjct: 181 RLADLVGSNLRLKITESQAILEEADPIKRLKLVNDLLAKELEVSTVQAKIQSDAKEEMSK 240
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ LR+Q+ A+++ELGD D+ ++ L RK++ MP + K +K++ R++ M P
Sbjct: 241 SQREYYLREQLHALQKELGDGDERGQEIDDLLRKIKKTKMPKPVRKEAKKQVSRMEMMHP 300
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ I D+PW+K +++ LDLKAAKE LD DH+GL ++K+RI+EYLAVRK
Sbjct: 301 DSSEATIIRTYIDWILDVPWKKGTKD-RLDLKAAKEVLDDDHFGLEKIKERILEYLAVRK 359
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L + +GP+LCFVGPPGVGKTSL S+A A+GRKF R+SLGG++DEA+IRGHRRTYIG+M
Sbjct: 360 LNTETKGPILCFVGPPGVGKTSLGKSVARAMGRKFYRLSLGGMRDEAEIRGHRRTYIGAM 419
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR++ GLK V NPV ++DEIDK GSD RGDP+SALLEVLDPEQN F+DHY+N+PFD
Sbjct: 420 PGRILQGLKTVNSNNPVFMMDEIDKIGSDYRGDPSSALLEVLDPEQNFEFSDHYMNMPFD 479
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+F+ TANR+ IP PLLDRME+I L GYT EEK IA ++L+PR + ++G+ L
Sbjct: 480 LSKVMFITTANRSDTIPGPLLDRMEIIRLSGYTLEEKAVIARKYLLPRQITENGIQPRHL 539
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ + ++ +I YT EAG+RNLER + + R A K+AE +
Sbjct: 540 RFADTAIEYIISHYTHEAGLRNLEREIGKICRKVARKIAEGGK----------------- 582
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
P + L++ LGPP+ E +
Sbjct: 583 --------------------------------GPYAISRNTLDRYLGPPKIIPESELEAL 610
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
PG+ GL WT GGE+ +E M GKG++ LTGQLGDV+KES Q ALT+ R+R DL
Sbjct: 611 RQPGLVTGLAWTEVGGEILTIEVNLMPGKGKMILTGQLGDVMKESVQAALTYCRSRCDDL 670
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ ED + DIH+H PAGA+PKDGPSAG+T+ TA+ S + K+V AMTGE+T
Sbjct: 671 G-IEED---YFEKHDIHVHVPAGAIPKDGPSAGITMATAIYSAVTGKKVLRKLAMTGEVT 726
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K LAA R G+ +VI+P +N KDL E+PA + ++ K M++V+E
Sbjct: 727 LRGRVLPIGGLKEKALAAVRAGLNKVIIPAQNEKDLAEIPAEIRKTMTFYPVKNMDEVVE 786
Query: 814 QAF 816
AF
Sbjct: 787 IAF 789
>gi|407473086|ref|YP_006787486.1| ATP-dependent protease LonA [Clostridium acidurici 9a]
gi|407049594|gb|AFS77639.1| ATP-dependent protease LonA [Clostridium acidurici 9a]
Length = 778
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/748 (43%), Positives = 462/748 (61%), Gaps = 67/748 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R ++E+ Y+ A I I E+ E+D AL R + E IS
Sbjct: 89 VLVEGINRGKIKEIIEEEPYFEAEIEEF----IYDEETEKDRKTEALMRIVVDSFEEYIS 144
Query: 132 VLEQKQKTGGRTKVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATE 188
+ K G ++L+ I +LAD+ + ++ E + +L+S RL
Sbjct: 145 I---GNKISG--EILVSVSEIQEPGRLADVIASYIFLTPENKQRILESFHPYERLETLEM 199
Query: 189 LVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKM 248
++ + +++ EKI+++V+ Q++K QKE+ LR+Q++AI+ ELG+ +D ++ L+ K+
Sbjct: 200 ILSEETEILKLEEKISERVKKQVNKVQKEYYLREQLKAIQSELGEGEDILSEVEELKEKI 259
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAK 308
MP + + KE+ RL K+ P R YL+ I +LPW+K +++ +D+K ++
Sbjct: 260 NKIKMPEEVKEKALKEINRLSKLPPSSSEVGIIRNYLDWIIELPWDKETKDT-VDIKKSR 318
Query: 309 ERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF 368
E LD DHYGL VK+RI+EYLA+RKL + + P++C VGPPGVGKTS+A SIA+AL RKF
Sbjct: 319 EVLDKDHYGLKDVKERILEYLAIRKLSNNMKAPIICLVGPPGVGKTSIAKSIATALSRKF 378
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
+R+SLGGV+DEA+IRGHRRTY+G++PGR+I +K+V NPV LLDEIDK D RGDPA
Sbjct: 379 VRMSLGGVRDEAEIRGHRRTYVGAIPGRIISSMKKVDSKNPVFLLDEIDKLSGDFRGDPA 438
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
SALLEVLDPEQN TF DH+L PFDLSKV+F+ TAN IP PLLDRMEVI + GYT E
Sbjct: 439 SALLEVLDPEQNNTFTDHFLEAPFDLSKVMFITTANALNTIPGPLLDRMEVIRVSGYTEE 498
Query: 489 EKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA 548
EKL+IA+R+L+P+ L++HGL E LQI E +K +I +YTREAGVR LER +A + R AA
Sbjct: 499 EKLQIAIRYLLPKQLEEHGLKEENLQISENTIKDIISKYTREAGVRGLERQIANVCRKAA 558
Query: 549 VKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPL 608
++ E++ +V R+ S L N L +R +
Sbjct: 559 KRIVEEDI--------NVVRINSSNLQNYLG---------------------IYRFSYDT 589
Query: 609 VVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLT 668
+ +E + GI GL WT+ GG+ +E T M G G+L LT
Sbjct: 590 INEENQV---------------------GIVTGLAWTSVGGDTLSIEVTPMNGVGKLQLT 628
Query: 669 GQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVT 728
G+LGDV+KESA ++++R+RA +L + E + +DIHIH P GA+PKDGPSAG+T
Sbjct: 629 GKLGDVMKESAMAGISYIRSRAEELGIDVE----FYKNKDIHIHVPEGAIPKDGPSAGIT 684
Query: 729 LVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKD 788
+ TA++S S V + AMTGE+TLRG VLPVGG+K+K+LAAHR GI +++LP KD
Sbjct: 685 MATAVISALSNTPVYKNVAMTGEITLRGRVLPVGGIKEKVLAAHRAGITKILLPWDCKKD 744
Query: 789 LVEVPAAVLASLEIILAKRMEDVLEQAF 816
+ +VP +E + K M++VLE A
Sbjct: 745 MEDVPNKTKKEIEFVFVKNMDEVLEHAL 772
>gi|431914099|gb|ELK15358.1| Peroxisomal Lon protease like protein 2 [Pteropus alecto]
Length = 536
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 298/539 (55%), Positives = 394/539 (73%), Gaps = 15/539 (2%)
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
+++ LP +++ LD++AA+ LD+DHY + ++K+R++EYLAVR+LK +GP+LCFV
Sbjct: 1 MLSLLPLAYSTDR--LDIRAARVLLDNDHYAMEKLKKRVLEYLAVRQLKSSLKGPILCFV 58
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTS+ S+A LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV
Sbjct: 59 GPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGV 118
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NPV LLDE+DK G ++GDPA+ALLEVLDPEQN F DHYLNV FDLS+V+F+ATAN
Sbjct: 119 NNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHYLNVAFDLSQVLFIATANTT 178
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
IPP LLDRME+I++PGYT EEK+ IA RHLIP+ L+QHGL + +QIP+A +I R
Sbjct: 179 ATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQATTLDIITR 238
Query: 527 YTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEM 586
YTREAGVR+L+R A+ RA AVKVAE + ++A +L P D +G +
Sbjct: 239 YTREAGVRSLDRKFGAICRAVAVKVAEGQHKEA--------KLERP--DATEGEGGREHV 288
Query: 587 EVIPMGESTHEVSN-TFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWT 645
ES + ++ P+++D L+ +LGPP + + E +ER++ PG+++GL WT
Sbjct: 289 LKDTEPESISDATDLALPPEMPILIDFHALKDILGPPMY-EMEVSERLSQPGVAIGLAWT 347
Query: 646 NFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLL 704
GGE+ FVEA+ M G+G+L LTGQLGDV+KESA +A++W+R+ A L G +LL
Sbjct: 348 PLGGEIMFVEASRMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKKYHLTNASGSFDLL 407
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
DIH+HFPAGAV KDGPSAGVT+VT L SLFS + VR+D AMTGE+TLRGLVLPVGG+
Sbjct: 408 DNTDIHLHFPAGAVTKDGPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGM 467
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWR 823
KDK+LAAHR G+K V++P+RN KDL EVP V L I A ++DVL AF+GG P +
Sbjct: 468 KDKVLAAHRAGLKCVVIPQRNEKDLEEVPGHVRQDLSFITASCLDDVLNAAFDGGFPVK 526
>gi|258405552|ref|YP_003198294.1| ATP-dependent protease La [Desulfohalobium retbaense DSM 5692]
gi|257797779|gb|ACV68716.1| ATP-dependent protease La [Desulfohalobium retbaense DSM 5692]
Length = 825
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 329/753 (43%), Positives = 465/753 (61%), Gaps = 63/753 (8%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GR+ V+++G+ R +++ + ++ + + E E E PD AL
Sbjct: 118 RMLKMPDGRLK--VLVQGVSRARIKQFTQHDPHHQVEVELI----AEAETPEITPDVEAL 171
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
R + + E+IS+ + VL +LAD+ ++ + E +L+ D
Sbjct: 172 MRSAREQSEEIISL--RGIDASEIMSVLNNVDEPGRLADLIASNLRMKTEHAQSILECQD 229
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
RLS + + ++ + KI + + K+QKEF LR+Q++AI+ ELG+ D +
Sbjct: 230 PIERLSLVNKQLLNEVEIASMQAKIQNMAKEGMDKAQKEFFLREQLKAIRSELGEGADVD 289
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
++ L + AG+ ++ K K+L+RL+ M P+ T R YLE + +LPW+K S+
Sbjct: 290 EEFEELREALDKAGLSKDVKKEADKQLKRLESMHPESSEATVIRTYLEWLVELPWKKTSK 349
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD+K A++ L+ DHY L +VK+RI+EYL+VRKL P +GP+LCFVGPPGVGKTSL
Sbjct: 350 D-RLDIKQAEKILNEDHYDLQKVKERILEYLSVRKLNPKMKGPILCFVGPPGVGKTSLGR 408
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA +L RKF R+SLGG++DEA+IRGHRRTYIGSMPGR+I G+K G NPV +LDEIDK
Sbjct: 409 SIARSLNRKFERMSLGGMRDEAEIRGHRRTYIGSMPGRIIQGIKNAGTRNPVFMLDEIDK 468
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
G+D RGDP+SALLEVLDPEQN +F DHYLNVPFDLSKV+F+ TAN IP LLDRME
Sbjct: 469 VGNDFRGDPSSALLEVLDPEQNYSFTDHYLNVPFDLSKVMFICTANMLDTIPSALLDRME 528
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+RIA R+L+PR + ++GL E+++I + + +I+ YTREAG+RNLER
Sbjct: 529 VIRLPGYTEQEKVRIARRYLLPRQIKENGLKEEWVKISDNTISQIIRDYTREAGLRNLER 588
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+ ++ R KVAE ++
Sbjct: 589 EIGSVCRKMTRKVAEGKE------------------------------------------ 606
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
FR+T L K LG P + + E E PG++VGL WT GGE+ VE T
Sbjct: 607 -GPFRVTP------QNLSKYLGVPPYQEDE-RELELPPGVAVGLAWTPAGGEIMHVEVTP 658
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
M GKG+L LTGQLG+V+KESA+ AL++ R+RA L L + +D+HIH PAGA
Sbjct: 659 MPGKGKLTLTGQLGEVMKESAKAALSYARSRAEKLGL----DHDFADKKDLHIHVPAGAT 714
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGVTLVTA++S + +R D AMTGE+TLRG VLPVGG+K+KILAA G++
Sbjct: 715 PKDGPSAGVTLVTAVLSALTETPIRPDVAMTGEITLRGRVLPVGGIKEKILAAVAAGMRT 774
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
VI+P RN KD E+P+ + +++I + ++++
Sbjct: 775 VIIPARNEKDFKEIPSELRRNIKIHTVESIDEI 807
>gi|326927273|ref|XP_003209817.1| PREDICTED: lon protease homolog 2, peroxisomal-like, partial
[Meleagris gallopavo]
Length = 524
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/523 (56%), Positives = 389/523 (74%), Gaps = 19/523 (3%)
Query: 302 LDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA 361
L+++AA+ LD+DHY + ++K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS+ SIA
Sbjct: 2 LEIRAARILLDNDHYAMEKLKKRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSIA 61
Query: 362 SALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGS 421
LGR+F RI+LGGV D++DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G
Sbjct: 62 KTLGREFHRIALGGVCDQSDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGK 121
Query: 422 DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIE 481
++GDPA+ALLEVLDPEQN +F DHYLNV FDLS+V+F+ATAN IPP LLDRMEVI+
Sbjct: 122 SLQGDPAAALLEVLDPEQNHSFTDHYLNVAFDLSQVLFIATANTTATIPPALLDRMEVIQ 181
Query: 482 LPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLA 541
+PGYT EEK+ IA RHLIP+ L+QHGL + +QIP+ +I RYTREAGVR+L+R L
Sbjct: 182 VPGYTQEEKIEIAHRHLIPKQLEQHGLTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLG 241
Query: 542 ALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNT 601
A+ RA AVKVAE + ++ P + L +G + + V +S +S+T
Sbjct: 242 AICRAVAVKVAEGQHKETKPDRSE------------LGEGEDCKEHVTEDAKS-ESISDT 288
Query: 602 FRIT----SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEAT 657
+ P+++D L+ +LGPP + + E +ER++ PG+++GL WT GGE+ FVEA+
Sbjct: 289 ADLALPPEMPILIDFHALKDILGPPMY-EMEVSERLSQPGVAIGLAWTPLGGEIMFVEAS 347
Query: 658 AMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAG 716
M G+G+L LTGQLGDV+KESA +A++W+R+ A QL G +LL DIH+HFPAG
Sbjct: 348 RMDGEGQLTLTGQLGDVMKESAHLAISWLRSNAKRYQLTNASGSFDLLDNTDIHLHFPAG 407
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
AV KDGPSAGVT+VT L SLFS + V +D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+
Sbjct: 408 AVTKDGPSAGVTIVTCLASLFSGRLVCSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGL 467
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
KR+I+P+RN KDL E+ V L ++A +++VL AF+GG
Sbjct: 468 KRIIIPQRNEKDLEEIALNVRQDLTFVMASCLDEVLNAAFDGG 510
>gi|408421453|ref|YP_006762867.1| ATP-dependent protease La Lon5 [Desulfobacula toluolica Tol2]
gi|405108666|emb|CCK82163.1| Lon5: ATP-dependent protease La [Desulfobacula toluolica Tol2]
Length = 783
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 314/754 (41%), Positives = 459/754 (60%), Gaps = 80/754 (10%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ---------VEQDPDFIALSRQF 122
++++GL RF V E Y ARI +E + + V+Q +A S
Sbjct: 100 LLIQGLDRFRVIEFLQNKKYMQARIDVMENRNADSNKENRALMANIVKQYEKIVAFSPGL 159
Query: 123 KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
+ ++I L++ H LAD+ ++ +E+ +L+ +D+ R
Sbjct: 160 PSEMGQMIKSLQEP----------------HVLADMVASTINAPVKEKQKVLELLDVNKR 203
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L K T LV+ L+ + ++ KI +V+ + K Q+E+ LRQQ++AI++ELG+ +D+ ++
Sbjct: 204 LKKVTRLVNDQLEILEMSFKIQSQVKEDMDKRQREYYLRQQLKAIRDELGETEDESVEIK 263
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
K++ +P K ++EL+RL +M P Y + YL+ + LPW+ AS+++ L
Sbjct: 264 EYRAKIEEKALPEEAQKEAKRELQRLSRMHPSSSEYVVASTYLDWLTSLPWDVASDDM-L 322
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
D+K AK+ L++DHYGL + K+RI+EYLAVR LK D++GP+LCF GPPG GKTSL SIA
Sbjct: 323 DIKEAKKILNNDHYGLEKPKKRILEYLAVRTLKNDSKGPILCFTGPPGTGKTSLGRSIAR 382
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
ALGR+F+RISLGGV+DEA+IRGHRRTY+G++PGR+I L++ G NPV +LDEIDK
Sbjct: 383 ALGRQFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQCLRKAGTNNPVFMLDEIDKVDHS 442
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
GDP+SALLEVLDPEQN +F+DHYL+VPFDLS V+F+ TAN IP PL DRME++EL
Sbjct: 443 YHGDPSSALLEVLDPEQNFSFSDHYLDVPFDLSDVMFLTTANVLHTIPAPLRDRMEILEL 502
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GYT EEK +IA R+LIP+ + +GL + +++ VKL+I YTRE+G+RNLE+ + A
Sbjct: 503 NGYTEEEKFKIATRYLIPKQREANGLTATRVKLTAGAVKLIISGYTRESGLRNLEQKIGA 562
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
+ R A ++ E E + + KD+H
Sbjct: 563 VCRGVAARIVEGETKNIIVGQKDLH----------------------------------- 587
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
+ LGP R + + A + PG+ +GL WT +GGE+ F+EA AM+G+
Sbjct: 588 --------------QYLGPVR-NRPDPALGIKNPGVVMGLAWTPYGGEILFIEAVAMKGR 632
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
L LTGQLGDV+KESA AL+++RA +++ + D+HIH P G++PKDG
Sbjct: 633 KGLTLTGQLGDVMKESASTALSFIRANTKKIKV----DHSFFNTHDLHIHVPEGSIPKDG 688
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAGV ++T L S+ + + V+ AM+GE+TLRG VLPVGG+K+K++AAHR GIK +ILP
Sbjct: 689 PSAGVAMLTCLASVMTGRLVKKRLAMSGEITLRGEVLPVGGIKEKVIAAHRAGIKTIILP 748
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N KD+ +VP + S+E +MEDVL A
Sbjct: 749 LWNQKDMEDVPEYIKDSIEFHFVDKMEDVLALAL 782
>gi|332296174|ref|YP_004438097.1| anti-sigma H sporulation factor LonB [Thermodesulfobium narugense
DSM 14796]
gi|332179277|gb|AEE14966.1| anti-sigma H sporulation factor, LonB [Thermodesulfobium narugense
DSM 14796]
Length = 786
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 327/780 (41%), Positives = 479/780 (61%), Gaps = 78/780 (10%)
Query: 39 QQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISS 98
+ EV + GV A L + ++ P G +V++G R + ++
Sbjct: 74 EAEVEGLYQVGVIANILQI---LKLPDGHAR--IVVQGTDRAKILSFKQTDPFFLVEFEK 128
Query: 99 LEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGR--TKVLLETVPIH--- 153
LE E+ +DP+ A+ R LIS E+ K G ++ ++ I
Sbjct: 129 LE------EEDSKDPEIEAMVRI-------LISKFEEATKLGKNIPSEAVIAIYNISEPS 175
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+L++ S EE+ ++L++ DLK +L K + V + + + V +I ++ ++ K
Sbjct: 176 RLSEYIATHLINSTEEKQLILETTDLKEKLKKLLKYVQKEISILEVESRIKNQINQEMEK 235
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
QKEF LR+Q++AI++ELG+ ++ + +L L+ K++ A MP + K V KE+ RL+KM
Sbjct: 236 HQKEFYLREQIKAIQKELGEAEEKQVELEDLKNKVKEAKMPPEVEKKVYKEISRLEKMPS 295
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
R YL+ + +LPW K S++ +LD+ A++ L+ +HYGL +VK+RIIE+LA+RK
Sbjct: 296 TSAEVPVIRTYLDWVINLPWSKKSKD-NLDIIKAEKILEREHYGLKKVKERIIEFLAIRK 354
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LCFVGPPGVGKTSL SIA+AL RKFIRI+LGG++DEA+IRGHR+TY+G++
Sbjct: 355 LTKSLKGPILCFVGPPGVGKTSLGKSIAAALNRKFIRIALGGMRDEAEIRGHRKTYVGAL 414
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I + +V NPV ++DEIDK G+D RGDP SALLEVLDPEQN +F DHYL VPFD
Sbjct: 415 PGRIIQSISQVQTNNPVFMMDEIDKVGTDFRGDPTSALLEVLDPEQNHSFTDHYLEVPFD 474
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+F+ TAN PIP PL DRME+IE+PGYT +EK+ IA+RHL+P+ L HGL E +
Sbjct: 475 LSNVMFITTANLIDPIPEPLRDRMEIIEIPGYTEDEKIEIAIRHLLPKQLKFHGLNKEKV 534
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+I + ++ +I+ YT EAGVRNLERN+A+L R AA +A + +
Sbjct: 535 KINKDVITKIIREYTHEAGVRNLERNIASLCRKAAKLIATNKAK---------------- 578
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
S TF + + LEK LG ++ A+ V
Sbjct: 579 -------------------------SVTFTVKN--------LEKYLGVAKY-SYGMADEV 604
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL WT GG++ F+E GKG+L LTGQLGDV+KESAQ AL+++++ A L
Sbjct: 605 DRVGVVTGLAWTPSGGDILFIETLIYPGKGQLTLTGQLGDVMKESAQAALSYIKSNAKTL 664
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ E +L D+HIH P GA+PKDGPSAGV + T++VS + K+ + AMTGE+T
Sbjct: 665 NVSEE----ILSKNDMHIHVPEGAIPKDGPSAGVAIATSMVSALTGKKASKNVAMTGEIT 720
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+++K+LAAHR GIK+V++PE+N KD+ E+P VL +LEI+ K +++ +
Sbjct: 721 LRGQVLPIGGIREKLLAAHRAGIKKVLIPEKNKKDVAEIPKNVLKNLEILYIKEVQEAFQ 780
>gi|148263317|ref|YP_001230023.1| ATP-dependent protease La [Geobacter uraniireducens Rf4]
gi|146396817|gb|ABQ25450.1| ATP-dependent protease La [Geobacter uraniireducens Rf4]
Length = 772
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 311/665 (46%), Positives = 438/665 (65%), Gaps = 58/665 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+L+D+ + +E +L+++D RL K + +Q +++ ++ +V ++ K
Sbjct: 164 RLSDLVALYVNLPVDELQKLLETIDPIERLKKVYMSLTAEVQRLQIKGEVQAEVTKKVGK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+LLR+QM+ I+EELG+ DD + ++ L +K+ SAGMP + K +KEL+RL+++ P
Sbjct: 224 TQKEYLLREQMKQIQEELGEEDDRQAEIKELRKKLSSAGMPEEVRKITEKELKRLERINP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
P YT SR YL+ + +PW+ A+ + + D+ A+ L+ DH+ L +VK+RI+EYLAVR
Sbjct: 284 ASPEYTVSRTYLDYLLGMPWQTATTD-NRDITQAEIVLNEDHFDLKKVKERILEYLAVRT 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
LK +GP+LCFVGPPGVGKTSL SIA ALGRKFIR+SLGG++DEA+IRGHRRTYIG++
Sbjct: 343 LKEKMKGPILCFVGPPGVGKTSLGRSIARALGRKFIRVSLGGMRDEAEIRGHRRTYIGAL 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I + R G NPV +LDE+DK G D RGDPASALLEVLDPEQN +F D+YL+VPFD
Sbjct: 403 PGRIIQEIYRAGNNNPVFMLDEVDKIGVDFRGDPASALLEVLDPEQNFSFTDNYLDVPFD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
L+ V+F+ TAN P+PP L DRMEVI L GYT EEK +IA+ +LIPR ++++GL L
Sbjct: 463 LTNVMFITTANVLDPVPPALKDRMEVITLSGYTDEEKEKIAVTYLIPREIEENGLTKYPL 522
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
Q EA + +I+ YTREAGVRNL+RN+A++ R KVA++ ++ P
Sbjct: 523 QFTEAAIYKIIRDYTREAGVRNLQRNIASICR----KVAKEITQKKPPRE---------- 568
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
++ + E+ LGP +F D AAE+
Sbjct: 569 -----------------------------------IITPELAEEFLGPRKFYDEVAAEKD 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL WT GG++ FVEAT M+GKG+L LTG LGDV+KESA+ AL++V A + DL
Sbjct: 594 RV-GVVTGLAWTETGGDIIFVEATRMKGKGDLILTGSLGDVMKESARAALSFVEANSADL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ ++ ++ +IHIH PAG++PKDGPSAG+T+ TA+VSL S ++ AMTGE++
Sbjct: 653 NIDPKEFTDM----NIHIHVPAGSIPKDGPSAGITMTTAIVSLLSGRQAHRHVAMTGEIS 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
L G VL +GG+K+KILAA R G+K+VI+PERN KDL ++P V LE I +EDV E
Sbjct: 709 LTGRVLAIGGLKEKILAARRAGVKKVIMPERNRKDLEDIPDNVREELEFIF---VEDVRE 765
Query: 814 QAFEG 818
E
Sbjct: 766 AFIEA 770
>gi|308274793|emb|CBX31392.1| ATP-dependent protease La 1 [uncultured Desulfobacterium sp.]
Length = 811
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 327/770 (42%), Positives = 469/770 (60%), Gaps = 64/770 (8%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GRV +V +G+ + + + R + Y +I + IE+ E + AL
Sbjct: 101 RMLKLPDGRVKALV--QGIAKAKILDFVRRKSVYRVKIERI----IELPLKEISIEIQAL 154
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
R + + ++++ + + TG +L KLAD+ +S + EE +L+ +D
Sbjct: 155 MRIVRENSEKIMAF--RGELTGDVGSILEGINDPGKLADLVASSLRLKIEESQQLLEIID 212
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
RL K EL+ + +Q + KI V+ ++SKSQ+++ LR+QMRAI +ELGDND+
Sbjct: 213 PVKRLKKVNELLSKEVQLSAMQAKIQSDVKEEISKSQRDYYLREQMRAINKELGDNDERS 272
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+L + +K++ M + +K+L+RL+ M + R YL+ + +LPW K+++
Sbjct: 273 QELSSYRKKIKRCKMSKEAEQEAEKQLKRLEMMHADSAEASVIRTYLDWLVELPWSKSTK 332
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ +++K AK+ LD+DHYGL +K RI+EYL+VRKL +GP+LCFVGPPGVGKTSL
Sbjct: 333 DV-INIKHAKKVLDTDHYGLDNIKDRILEYLSVRKLNLKMKGPILCFVGPPGVGKTSLGK 391
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
+IA+A+ RKF+RISLGG++DEA+IRGHRRTYIG++PGR+++GLK+ G NPV ++DEIDK
Sbjct: 392 AIATAMKRKFVRISLGGIRDEAEIRGHRRTYIGALPGRILNGLKQCGTNNPVFMMDEIDK 451
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
G+D RGDP++ALLE LDPEQN F+DHYLN+ FDLSKV+FV TAN IP LLDRME
Sbjct: 452 VGADFRGDPSAALLEALDPEQNFAFSDHYLNLAFDLSKVMFVLTANLTDTIPSALLDRME 511
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI L GYT EEK IA L PR + ++G+ ++ L I ++ +I YT EAG+RNLER
Sbjct: 512 VINLSGYTSEEKKIIAETFLFPRQIKENGISTKKLSISSEAMQQIITEYTSEAGLRNLER 571
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+ + R A K+AE E+
Sbjct: 572 EIGTICRKVARKIAEGEK------------------------------------------ 589
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
TF I+ + L+K LG P+F E + + G+S GL WT GGEV +VEA
Sbjct: 590 -GTFHIS------KKNLQKFLGVPKFIP-EMDQEDSQIGLSTGLAWTQVGGEVLYVEAAL 641
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
GKGEL +TGQLG+V++ESA+ A+++ RA + L N+ D+HIH PAGA+
Sbjct: 642 FVGKGELIITGQLGEVMQESARAAVSYARANLSLFGLEE----NIFDNTDVHIHVPAGAI 697
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+ + TAL+S+ K V AMTGE+TLRG VLP+GG+K+K L A R GIK
Sbjct: 698 PKDGPSAGIAMATALISVLINKPVNKFVAMTGEITLRGRVLPIGGLKEKALGALRAGIKT 757
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG-GCPWRQHSK 827
+I+PE+N+KDL E+P V ++ + K+M DVL A EG QH K
Sbjct: 758 IIIPEKNIKDLTEIPQNVKRKIKFVTVKQMNDVLPLAIEGFNADDLQHKK 807
>gi|312127982|ref|YP_003992856.1| ATP-dependent protease la [Caldicellulosiruptor hydrothermalis 108]
gi|311778001|gb|ADQ07487.1| ATP-dependent protease La [Caldicellulosiruptor hydrothermalis 108]
Length = 775
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 328/745 (44%), Positives = 455/745 (61%), Gaps = 60/745 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+++EGL R V + Y+ + + +I++E DP+ AL R A E +
Sbjct: 89 ILVEGLYRARVIRYLSTDPYFLVEVEEYKENEIKLED---DPELEALIRNV-VGAFEEFA 144
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
L K V P +LAD+ A+ + E++ ++L+ VDLK RL+K E++
Sbjct: 145 RLTNKIPPDAILSVTTIQSP-DQLADVIAANVVVKLEDKQLLLEKVDLKERLAKLYEMIL 203
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ + I + KI KV+ Q+ K+QKE+ LR+Q++AI+ ELG+ D + +++
Sbjct: 204 KEKEIIEIERKIAIKVKKQIDKTQKEYYLREQLKAIQSELGEKDSLFSEAQEYREQIKKI 263
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
G+ + V KE+ RL+K+ P P R YL+ I DLPW S+E +D+ K+ L
Sbjct: 264 GLSEESLQKVFKEIDRLEKLPPNSPEVGVIRTYLDWIVDLPWNVRSDE-KIDINVVKKVL 322
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHYGL +VK+RI+EY+AVRKLK D +GP+LC VGPPGVGKTS+A SIA AL R ++RI
Sbjct: 323 DEDHYGLTKVKERILEYIAVRKLKNDMKGPILCLVGPPGVGKTSIAKSIARALNRNYVRI 382
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGG++DEA+IRGHR+TY+G+MPGR+I L++ NP++LLDEIDK D RGDPASAL
Sbjct: 383 SLGGLRDEAEIRGHRKTYVGAMPGRIIYALRQAKTKNPLILLDEIDKMSHDFRGDPASAL 442
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLD EQN F DHY+ +PFDLS+V+F+ATAN + IP PLLDR+EVIE+ GYT EEKL
Sbjct: 443 LEVLDSEQNFAFRDHYIEIPFDLSEVMFIATANTLETIPRPLLDRLEVIEITGYTEEEKL 502
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
IA R+L+P+ ++Q+GL L+ ++ +I YTRE+GVRNLER +A L R A ++
Sbjct: 503 EIARRYLLPKQMEQNGLKKSQLRCETEAIRDIITFYTRESGVRNLEREIARLCRRVAKEI 562
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
E+ ++ + K+
Sbjct: 563 LEENKKMVRVTQKN---------------------------------------------- 576
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
LEK LG ++ E E+ GI GL WT FGGE +VEA M G G+L LTGQL
Sbjct: 577 ---LEKYLGVRKYRRDELIEQDRV-GIVTGLAWTPFGGETLYVEALVMPGSGKLELTGQL 632
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDV+KESA+ A++ +R+RA DL + N + DIHIH P GA+PKDGPSAGVT+ T
Sbjct: 633 GDVMKESAKAAVSIIRSRAKDLGI----DENFYKECDIHIHVPEGAIPKDGPSAGVTMAT 688
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
A+VS S+++VR D AMTGE+TL G VLP+GGVK+K+LAA R GIK VILP N KD+ E
Sbjct: 689 AMVSALSQRKVRYDIAMTGEITLSGRVLPIGGVKEKVLAAKRMGIKNVILPFENKKDVDE 748
Query: 792 VPAAVLASLEIILAKRMEDVLEQAF 816
+ V + I K +++V + A
Sbjct: 749 LEDYVKKDMNFIFVKTIDEVFDIAI 773
>gi|146296519|ref|YP_001180290.1| ATP-dependent protease La [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|302425039|sp|A4XJL4.1|LON_CALS8 RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|145410095|gb|ABP67099.1| ATP-dependent protease La [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 774
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 334/753 (44%), Positives = 458/753 (60%), Gaps = 75/753 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+++EGL R V + Y+ + + ++ DP+ AL R ++S
Sbjct: 89 ILVEGLSRAKVIGYVSVDPYFLVEVEEYKEKGGNLD----DPELEALIRN-------VVS 137
Query: 132 VLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
E+ + R +L I +LAD+ A+ + E++ ++L+ VDLK RL+K
Sbjct: 138 AFEEYARLTSRIPPDAILSVTTIQNPGQLADVIAANVIVKLEDKQLLLEQVDLKERLTKL 197
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
EL+ R + I + KIT KV+ Q+ K QKE+ LR+Q++AI+ ELG+ D +
Sbjct: 198 YELILREKEIIEIERKITIKVKKQIDKMQKEYYLREQLKAIQSELGEKDSLFSEAQEYRE 257
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
++Q G+ + + V KE+ RL+K+ P P R YLE I DLPW SEE +D+
Sbjct: 258 QVQKLGLSNENLQKVYKEIDRLEKLPPNSPEIGVIRTYLEWIIDLPWNVKSEE-KIDINV 316
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
K LD DHYGL +VK+RI+EY+AVRKLK + +GP+LC VGPPGVGKTS+A SIA AL R
Sbjct: 317 VKNVLDEDHYGLTKVKERILEYIAVRKLKNNLKGPILCLVGPPGVGKTSIAKSIARALNR 376
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
++RISLGG++DEA+IRGHR+TY+G+MPGR+I L++ NP++LLDEIDK D RGD
Sbjct: 377 NYVRISLGGLRDEAEIRGHRKTYVGAMPGRIIYALRQAKTKNPLILLDEIDKMSQDFRGD 436
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
PASALLEVLD EQN F DHY+ +PFDLS+V+F+ATAN + IP PLLDR+EVIE+ GYT
Sbjct: 437 PASALLEVLDSEQNYAFRDHYVEIPFDLSEVMFIATANTLETIPRPLLDRLEVIEITGYT 496
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EEK+ IA R+L P+ ++Q+GL ++ EA+++ +I YTRE+GVRNLER +A L R
Sbjct: 497 EEEKVEIAKRYLFPKQIEQNGLKKSQIRYDEAVIRDIISFYTRESGVRNLEREIARLCRR 556
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS 606
A ++ E+ ++ RIT+
Sbjct: 557 VAKEILEENKKMV-------------------------------------------RITT 573
Query: 607 PLVVDEAMLEKVLGPPRFDDREAAE--RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGE 664
LEK LG ++ E E R+ GI GL WT FGGE VEA M G G+
Sbjct: 574 ------RNLEKYLGVRKYRRDELIEEDRI---GIVTGLAWTPFGGETLSVEALVMPGSGK 624
Query: 665 LHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPS 724
L LTGQLGDV+KESA+ A++ +RARA +L + N + DIHIH P GA+PKDGPS
Sbjct: 625 LELTGQLGDVMKESAKAAVSIIRARAKELGI----DENFYKEYDIHIHVPEGAIPKDGPS 680
Query: 725 AGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPER 784
AGVT+ TA+VS S+K VR D AMTGE+TL G VLP+GGVK+KILAA R GIK VILP
Sbjct: 681 AGVTMATAMVSALSKKPVRHDVAMTGEITLSGRVLPIGGVKEKILAAKRVGIKNVILPYE 740
Query: 785 NLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
N KD+ E+ V + + K +++V + A +
Sbjct: 741 NKKDVDELEDYVKKDMNFVFVKAIDEVFKIAIK 773
>gi|94266501|ref|ZP_01290191.1| Peptidase S16, ATP-dependent protease La [delta proteobacterium
MLMS-1]
gi|93452888|gb|EAT03402.1| Peptidase S16, ATP-dependent protease La [delta proteobacterium
MLMS-1]
Length = 827
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 337/754 (44%), Positives = 468/754 (62%), Gaps = 77/754 (10%)
Query: 70 YIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMEL 129
Y V++ + + + E + R Y AR+ + M + +++E + + QFK A
Sbjct: 140 YQVLISAVKKLRIVEYTQRRPYLKARVEVVPMAEEHDQEIEAM--LLNIRTQFKKMA--- 194
Query: 130 ISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQL------VMLDSVDLKVRL 183
+ GG + L+ TV + L + F ++ + + L +L+ VDLK L
Sbjct: 195 --------ELGGTPEELVMTV--NALTNPFYVAYLVLSQTGLGLEQEEEILEIVDLKELL 244
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ +++ L+++ ++ KI + ++ + K Q+EF LR+Q++AIK+ELG+ DD+ DL
Sbjct: 245 NRVGHELNKKLETVEMSHKIQKGIKQDMDKRQREFFLREQLKAIKKELGE-DDENLDLKE 303
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L +++ A +P K +KEL RL ++ P P YT SR YL+ I DLPW A+E+ LD
Sbjct: 304 LRGRLEEAKLPEEARKSAEKELDRLGRISPSSPEYTVSRTYLDWILDLPWLIATED-HLD 362
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L+ A+ LD DHYGL ++K+RIIE+LAVRKLK D RGP+LCFVGPPGVGKTSL SIA +
Sbjct: 363 LERARRVLDEDHYGLDKIKKRIIEFLAVRKLKQDMRGPILCFVGPPGVGKTSLGQSIARS 422
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
+GR F+RISLGGV+DEA+IRGHRRTYIG++PGR+I L++ G NP+ +LDE+DK G D
Sbjct: 423 MGRNFVRISLGGVRDEAEIRGHRRTYIGALPGRIIQSLRKAGAHNPLFMLDEVDKLGMDF 482
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP+SALLEVLDPEQN +F+DHYL + FDLSKV+F+ TAN IP PL DRMEVIEL
Sbjct: 483 RGDPSSALLEVLDPEQNFSFSDHYLEIAFDLSKVMFITTANLLDNIPGPLKDRMEVIELT 542
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT +EKL IA RHL+P+ L+ + L ++ LQI + ++ +I+ YTREAGVRNLER + +
Sbjct: 543 GYTEDEKLHIARRHLLPKQLEANALSADDLQINDDGLRGIIRSYTREAGVRNLEREIGGV 602
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A ++ E G +EV P
Sbjct: 603 CRGVARQIVE---------------------------GHSGRLEVGP------------- 622
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
D+ L + LGP +F E R PG++ GL WT GG++ F+E M+GKG
Sbjct: 623 -------DD--LAQYLGPLKF-FAETKARTWGPGLATGLAWTPVGGDLLFIETARMQGKG 672
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
EL LTG+LG+V+KESA ALT++R+ A +L + E L D H+H P GA+PKDGP
Sbjct: 673 ELTLTGKLGEVMKESATAALTYIRSHAKELGIDEE----LFAKSDFHVHVPEGAIPKDGP 728
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAGV +V +LVS + + V + AMTGE+TLRG VLPVGGVK+K++AA R GI RVILP
Sbjct: 729 SAGVAMVVSLVSQLTGRAVSREVAMTGEITLRGDVLPVGGVKEKVVAAVRAGIPRVILPR 788
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
N KDL E+PA LE+ L + + LE A E
Sbjct: 789 LNDKDLDELPAGTREQLEVHLVNDINEALEVALE 822
>gi|114567168|ref|YP_754322.1| endopeptidase La [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122317853|sp|Q0AWF3.1|LON_SYNWW RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|114338103|gb|ABI68951.1| Lon-A peptidase. Serine peptidase. MEROPS family S16
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 812
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 328/761 (43%), Positives = 456/761 (59%), Gaps = 81/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVE--------QDPDF 115
P G T V++EGL R + Y R+ L KI+ ++E Q +
Sbjct: 85 PGG--TMRVLVEGLFRAEINAYLANDPYMKVRVEELRDKKIKSPELEALMRNLVGQFEQY 142
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ +S++ + + +E+ GGR LAD+ + + E+ +L+
Sbjct: 143 VRMSKKIPPETVVSVVAIEE----GGR------------LADVIASHLNLRINEKQRILE 186
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL+ EL+ + ++ + + KI +V Q+ K+QKE+ LR+Q++AI++ELG+ D
Sbjct: 187 LSDINKRLNYLCELLAKEMEVLELERKINIRVRKQMEKTQKEYYLREQIKAIQKELGEKD 246
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
+ ++ +++ A MP + + KEL RL+KM P R YL+ I LPW
Sbjct: 247 ERSSEVEEFRERIKKANMPKDAEEKAFKELERLEKMPPMVAEAVVVRNYLDWILSLPWSL 306
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+ + LDLKAA+ LD DHYGL + K+RI+EYLA+RKL +GP+LC VGPPGVGKTS
Sbjct: 307 ETRD-RLDLKAAEAILDEDHYGLEKPKERILEYLAIRKLAKKMKGPILCLVGPPGVGKTS 365
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L S+ +LGRKFIR+SLGG++DEA+IRGHRRTY+GSMPGR++ G+K G NPV LLDE
Sbjct: 366 LGKSVGRSLGRKFIRMSLGGIRDEAEIRGHRRTYVGSMPGRILQGMKTAGSKNPVFLLDE 425
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK D RGDPASALLEVLDPEQN F+DHYL +PFDLSKV+F+ TAN IP PLLD
Sbjct: 426 IDKMTMDFRGDPASALLEVLDPEQNYIFSDHYLEIPFDLSKVMFITTANSVFNIPRPLLD 485
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+IE+ GYT E+K+ IA +L+P+ + +HGL + E ++ +I+ YTREAGVRN
Sbjct: 486 RMEIIEITGYTEEDKVHIATDYLVPKQIKEHGLKESNITFSEGTLRRIIREYTREAGVRN 545
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER +A++ R A +V E KD
Sbjct: 546 LERQIASICRKVARQVVE---------DKDTF---------------------------V 569
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
H SN+ L + LG R+ AE G++ GL WT GG++ +E
Sbjct: 570 HVASNS-------------LNRFLGAGRY-RYGVAESENQVGVATGLAWTESGGDILSIE 615
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
++GKG L LTG+LG+V+KESAQ ALT+VR++A +L + E + D+HIH P
Sbjct: 616 VALLKGKGNLTLTGKLGEVMKESAQAALTYVRSKADELGINDE----IRDKYDVHIHIPE 671
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA+PKDGPSAG+TL TAL S S VR+D AMTGE+TLRG +LP+GGVK+KILAAHR G
Sbjct: 672 GAIPKDGPSAGITLATALASAMSGLPVRSDVAMTGEITLRGRILPIGGVKEKILAAHRAG 731
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
I +V+LP N KDL E+PA V ++++L M++VLE+
Sbjct: 732 IAKVLLPVENKKDLAEIPAPVKRKIKLVLVSHMDEVLEETL 772
>gi|452991804|emb|CCQ96763.1| class III heat-shock ATP-dependent LonA protease [Clostridium
ultunense Esp]
Length = 786
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 318/759 (41%), Positives = 465/759 (61%), Gaps = 74/759 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G + V++EG+ R V EL Y+ ++ +E+ DP+ I + ++ +
Sbjct: 86 PGGSIR--VLVEGINRGRVVELIKEEDYF----------EVIVEEFTYDPEDIVVDKETE 133
Query: 124 ATAMELISVLEQKQKTGGRTK--VLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
A +I+ E+ R +LL I +LAD+ + + E +L++ +
Sbjct: 134 AAMRLVINDFEEYLTLSRRISPDILLTVTDIDDPGRLADVIASYINLKIENHQKILETFN 193
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
RL + +++ ++ +R+ EKI Q+V+ Q++K QKE+ L++Q+RAI++ELG+ ++ +
Sbjct: 194 FYERLEELHKILQEEIELLRIEEKINQRVKKQITKVQKEYYLKEQLRAIQKELGEENELD 253
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
D++ + K+ MP + + KE+ RL KM P R YL+ I +LPW+K ++
Sbjct: 254 DEIEEYKTKILKMKMPKEVKEKALKEVERLDKMSPHSAETAVIRTYLDWIVELPWDKETK 313
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ +D+K A++ L+ DHYGL VK+RI+E++A+RKL +GP+LC VGPPGVGKTS+A
Sbjct: 314 D-KVDIKKARDILNRDHYGLTDVKERILEFIAIRKLATSMKGPILCLVGPPGVGKTSIAK 372
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA +L R+F+R+SLGGV+DEA++RGHRRTY+G+MPGR+I +++ G NPV L DEIDK
Sbjct: 373 SIAESLNREFVRMSLGGVRDEAEMRGHRRTYVGAMPGRIISLIRKAGTKNPVFLFDEIDK 432
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
+ RGDPASALLE+LDPEQN TF DH+L +PFDLSKV+F+ TAN IP PLLDRME
Sbjct: 433 LSTGFRGDPASALLEILDPEQNNTFTDHFLELPFDLSKVLFITTANTVNSIPAPLLDRME 492
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI + GYT EEKL+IA HL+P+ L +HGL E L I E ++ +I YTREAGVRNLER
Sbjct: 493 VIRISGYTEEEKLKIATNHLLPKQLKEHGLKKENLTISERAMRSIINNYTREAGVRNLER 552
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHE 597
N+A + R AA K+ E E+ + ++H+ LG
Sbjct: 553 NIANICRKAAKKIVETNAEKVRVNKGNLHKYLG--------------------------- 585
Query: 598 VSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEAT 657
+EK R+D ER G++ GL WT FGG+ +E
Sbjct: 586 -----------------IEKY----RYD---LGERENQVGVATGLAWTAFGGDTLSIEVN 621
Query: 658 AMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGA 717
+M+G G+L LTGQLG+V+KESA ++++RA + L + + N + DIH+H P GA
Sbjct: 622 SMKGTGKLQLTGQLGEVMKESAMAGISYIRANSDKLGVDS----NFYKEMDIHVHVPEGA 677
Query: 718 VPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIK 777
+PKDGPSAG+T+ TA +S + K V + AMTGE+TLRG VLPVGG+K+K LAA+R GIK
Sbjct: 678 IPKDGPSAGITMATAAISALTNKPVNNNIAMTGEITLRGRVLPVGGIKEKALAANRIGIK 737
Query: 778 RVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+V++P N KDL E+P + ++ + K ME VLE A
Sbjct: 738 KVLIPFENSKDLEEIPEKIRRKMDFVAVKNMEQVLEHAL 776
>gi|312134774|ref|YP_004002112.1| ATP-dependent protease la [Caldicellulosiruptor owensensis OL]
gi|311774825|gb|ADQ04312.1| ATP-dependent protease La [Caldicellulosiruptor owensensis OL]
Length = 775
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 326/745 (43%), Positives = 455/745 (61%), Gaps = 60/745 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+++EGL R V + Y+ + + +I++E DP+ AL R A E +
Sbjct: 89 ILVEGLYRARVVRYLSTDPYFLVEVEEYKENEIKLED---DPELEALIRNV-VGAFEEFA 144
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
L K V P +LAD+ A+ + E++ ++L+ VDLK RL+K E++
Sbjct: 145 RLTNKIPPDAILSVTTIQSP-DQLADVIAANVVVKLEDKQLLLEKVDLKERLAKLYEMIL 203
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ + I + KI KV+ Q+ K+QKE+ LR+Q++AI+ ELG+ D + +++
Sbjct: 204 KEKEIIEIERKIAIKVKKQIDKTQKEYYLREQLKAIQSELGEKDSLFSEAQEYREQIKKL 263
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
G+ + V KE+ RL+K+ P P R YL+ I DLPW S+E +D+ K+ L
Sbjct: 264 GLSEESLQKVFKEIDRLEKLPPNSPEVGVIRTYLDWIVDLPWNVRSDE-KIDINVVKKVL 322
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHYGL +VK+RI+EY+AVRKLK D +GP+LC VGPPGVGKTS+A SIA AL R ++RI
Sbjct: 323 DEDHYGLTKVKERILEYIAVRKLKNDMKGPILCLVGPPGVGKTSIAKSIARALNRNYVRI 382
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGG++DEA+IRGHR+TY+G+MPGR+I L++ NP++LLDEIDK D RGDPASAL
Sbjct: 383 SLGGLRDEAEIRGHRKTYVGAMPGRIIYALRQAKTKNPLILLDEIDKMSHDFRGDPASAL 442
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLD EQN F DHY+ +PFDLS+V+F+ATAN + IP PLLDR+EVIE+ GYT EEKL
Sbjct: 443 LEVLDSEQNFAFRDHYIEIPFDLSEVMFIATANTLETIPRPLLDRLEVIEITGYTEEEKL 502
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
IA R+L+P+ ++Q+GL L+ ++ +I YTRE+GVRNLER +A L R A ++
Sbjct: 503 EIARRYLLPKQMEQNGLKKSQLRCDPEAIRDIITFYTRESGVRNLEREIARLCRRVAKEI 562
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
E+ ++ + K+
Sbjct: 563 LEENKKMVRVTKKN---------------------------------------------- 576
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
LEK LG ++ E E+ GI GL WT FGGE +VEA M G G+L LTGQL
Sbjct: 577 ---LEKYLGVRKYKRDELIEQDRV-GIVTGLAWTPFGGETLYVEALVMPGSGKLELTGQL 632
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDV+KESA+ A++ +R+RA +L + N + DIHIH P GA+PKDGPSAG+T+ T
Sbjct: 633 GDVMKESAKAAVSIIRSRAKELGI----DENFYKDCDIHIHVPEGAIPKDGPSAGITMAT 688
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
A+VS S+++VR D AMTGE+TL G VLP+GGVK+K+LAA R GIK VILP N KD+ E
Sbjct: 689 AMVSALSKRKVRYDVAMTGEITLSGRVLPIGGVKEKVLAAKRVGIKNVILPFENKKDVDE 748
Query: 792 VPAAVLASLEIILAKRMEDVLEQAF 816
+ V + I K +++V + A
Sbjct: 749 LEDYVKKDMNFIFVKTIDEVFDIAI 773
>gi|328953435|ref|YP_004370769.1| anti-sigma H sporulation factor LonB [Desulfobacca acetoxidans DSM
11109]
gi|328453759|gb|AEB09588.1| anti-sigma H sporulation factor, LonB [Desulfobacca acetoxidans DSM
11109]
Length = 816
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 336/771 (43%), Positives = 478/771 (61%), Gaps = 68/771 (8%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GR+ +V +GL + ++ + A + ++T+ ME++ + + AL
Sbjct: 94 RMLKLPDGRLKILV--QGLTKALIKSFLQEKPFMKA--TQEQITEQIMEEISIEAE--AL 147
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETV-PIHKLADIFVASFEISFEEQLVMLDSV 177
R + +++S+ K +LE++ +LA++ ++ + EE +L+
Sbjct: 148 MRNAREMTEKILSL---KGILSPEMSSILESIDEPGRLANLIASNLHLKIEEAQEILEQR 204
Query: 178 DLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDD 237
+ RL + + + R L+ + KI + + ++ +SQ+E+ LR+Q+RAIK+ELGD ++
Sbjct: 205 EPIHRLIRINDYLRRELEVSTMQAKIQSEAKEEIDRSQREYFLREQLRAIKKELGDFEER 264
Query: 238 EDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKAS 297
D++ ++K+ A MP + + ++L RL++M P T R YL+ + ++PW + +
Sbjct: 265 PDEIEEYQQKITKARMPRGVEEEAVRQLTRLEQMHPDAAEATMVRTYLDWLVEVPWSRNT 324
Query: 298 EEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLA 357
+ L+LK AK LD+DHY L +VK RI+EYL+VRKL +GP+LCFVGPPGVGKTSL
Sbjct: 325 RD-KLELKEAKTVLDADHYDLEKVKDRILEYLSVRKLNKKMKGPILCFVGPPGVGKTSLG 383
Query: 358 SSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEID 417
SIA A+GRKF RISLGG++DEA+IRGHRRTYIG++PGR+I GLK GV NPV ++DEID
Sbjct: 384 RSIARAMGRKFTRISLGGIRDEAEIRGHRRTYIGALPGRIIQGLKNAGVNNPVFMMDEID 443
Query: 418 KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRM 477
K G D RGDPA+ALLEVLDPEQN F+DHYLNVPFDLSKV+F+ TAN PIP LLDRM
Sbjct: 444 KIGQDFRGDPAAALLEVLDPEQNFAFSDHYLNVPFDLSKVMFILTANLVDPIPSALLDRM 503
Query: 478 EVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLE 537
E+I L GYT EEKL IA + L+PR L ++GL L I ++ +I YT+EAG+RNLE
Sbjct: 504 EIIRLAGYTEEEKLEIAKKFLLPRQLQENGLNPTELTITPNSLRELISHYTQEAGLRNLE 563
Query: 538 RNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTH 596
R + +L R A ++AE E+ S ++HR LG P R AE E + I
Sbjct: 564 REIGSLCRKVARRIAEAEKGPFTISRGNLHRYLGPP----RYLPEAEQEKDEI------- 612
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
G++ GL WT FGGE+ FVEA
Sbjct: 613 ----------------------------------------GVATGLAWTEFGGELLFVEA 632
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ M+GKG+L LTG LG+V+KESAQ AL++ RAR+ L +ED L D+H+H PAG
Sbjct: 633 SLMKGKGQLTLTGHLGEVMKESAQAALSYARARSQLFNL-SEDFYEKL---DVHLHVPAG 688
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A+PKDGPSAGVT+ TAL+S ++ VR D AMTGE+TLRG VLP+GG+K+K LAA R I
Sbjct: 689 AIPKDGPSAGVTMATALISTLTQIPVRKDVAMTGEITLRGKVLPIGGLKEKALAALRARI 748
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHSK 827
K++I+PE N KDL E+P + L+ IL + M++VL+ A P R+ +K
Sbjct: 749 KQIIIPEANRKDLTEIPKHIKRRLKFILVQNMDEVLQVAL-TRLPTREETK 798
>gi|303327273|ref|ZP_07357715.1| ATP-dependent protease La [Desulfovibrio sp. 3_1_syn3]
gi|345891131|ref|ZP_08841988.1| lon protease [Desulfovibrio sp. 6_1_46AFAA]
gi|302863261|gb|EFL86193.1| ATP-dependent protease La [Desulfovibrio sp. 3_1_syn3]
gi|345048556|gb|EGW52383.1| lon protease [Desulfovibrio sp. 6_1_46AFAA]
Length = 866
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 329/758 (43%), Positives = 468/758 (61%), Gaps = 83/758 (10%)
Query: 55 LHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQV----- 109
+ + R ++ P RV +V +G+ R V S Y ARI +L +++
Sbjct: 121 VQVMRMLKMPDSRVKILV--QGVSRARVTGYSQVDPYLEARIETLPEVAPQIDATVEALL 178
Query: 110 ----EQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
EQ + L ++ ++++VL+ + G +LAD+ A+ +
Sbjct: 179 RSAREQSEKVLTLR---GLSSPDVLAVLQGVEDPG-------------RLADLIAANMRM 222
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
+ +L++ + RL+ + R ++ V +I + K+QK++ LR+Q++
Sbjct: 223 KIADAQRILEAENPLERLTLVNTQLQREVEVATVQARIQSSAREGMDKAQKDYFLREQLK 282
Query: 226 AIKEELGDNDDD-EDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
AI++ELG+N+ + EDDL +L++ + AG+P ++ + K+LRRL M R Y
Sbjct: 283 AIRQELGENESEGEDDLESLKKALDKAGLPKDVRQEADKQLRRLSGMHADSSEANVVRTY 342
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
L+ + DLPW+K S + LD+ AKE LD DH GL ++K RI+E+L+VRKL P ++GP+LC
Sbjct: 343 LDWLVDLPWKKLSRD-RLDIAHAKEILDEDHCGLDKIKDRILEFLSVRKLNPQSKGPILC 401
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
F GPPGVGKTSL SIA ALGRKF R+SLGG+ DEA+IRGHRRTYIG+MPGR+I +K+
Sbjct: 402 FAGPPGVGKTSLGRSIARALGRKFQRLSLGGMHDEAEIRGHRRTYIGAMPGRIIQAIKQA 461
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G NPV++LDE+DK G+D RGDP+SALLEVLDPEQN TF+DHYLNVPFDLSKV+F+ TAN
Sbjct: 462 GTRNPVIVLDEVDKLGTDFRGDPSSALLEVLDPEQNHTFSDHYLNVPFDLSKVMFLCTAN 521
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
+ IP L DRMEVI LPGYT +EK+ IA +HL+P+ + ++GL + + + ++ VI
Sbjct: 522 HLETIPAALRDRMEVISLPGYTLQEKVEIARKHLLPKKITENGLAEGDIALSDGALEKVI 581
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEV 584
+ YTREAG+RNLER LA++ R A + AE ++
Sbjct: 582 KEYTREAGLRNLERELASICRKLARRKAEGKK---------------------------- 613
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
P V+ +EK+LG PRF + E E+ PG+++GL W
Sbjct: 614 ---------------------GPFKVEPKDVEKLLGAPRFVEDEK-EKELMPGMALGLAW 651
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GGEV VEA+ M+GKG L LTGQLGDV+KESAQ AL+++R+RA +L + + +
Sbjct: 652 TPAGGEVLTVEASVMKGKGGLTLTGQLGDVMKESAQAALSYIRSRAEELGV----DPSFV 707
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
DIH+H PAGA PKDGPSAGVTL TAL+S S +RVRAD MTGE+TL+G VLPVGG+
Sbjct: 708 SKYDIHVHVPAGATPKDGPSAGVTLTTALISALSNRRVRADLCMTGEITLQGRVLPVGGI 767
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
K+KILA G+K VI+P++N+KDL +VP +L + +
Sbjct: 768 KEKILAGVARGLKHVIIPQQNMKDLEDVPRELLKRITV 805
>gi|147677142|ref|YP_001211357.1| ATP-dependent Lon protease [Pelotomaculum thermopropionicum SI]
gi|146273239|dbj|BAF58988.1| ATP-dependent Lon protease [Pelotomaculum thermopropionicum SI]
Length = 805
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 330/758 (43%), Positives = 457/758 (60%), Gaps = 75/758 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EG+ R V+ + ++ ++E+EQ +D + + +
Sbjct: 81 PGG--TIRVLVEGIARARVRRFISMEPFF----------RVEVEQYYED---FQKNSEIE 125
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
A L+ EQ K R + ++ V + +LADI + + E++ +L+SV+
Sbjct: 126 ALMRSLVYQFEQYVKLSKRIPPETVVSVVNLEEPGRLADIIASHLALRIEDKQSILESVN 185
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL K +V R L+ + + KI +V Q+ K+QKE+ LR+QM+AI+ ELG+ D+
Sbjct: 186 IIGRLEKLCAIVARELEIVELERKINIRVRKQMEKTQKEYYLREQMKAIQRELGEKDERM 245
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ L K+ +P ++ + KE+ RL+KM P R YL+ + LPW K++
Sbjct: 246 AEGEELREKIAEVKLPKDVEEKALKEVERLEKMPPMAAEAAVVRNYLDWLLSLPWNKSTR 305
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD+KAA+ L+ DHYGL VK+RI+EYLA+RKL +GP++CFVGPPGVGKTSL
Sbjct: 306 D-RLDIKAAEAILEEDHYGLKTVKERILEYLAIRKLAKKMKGPIICFVGPPGVGKTSLGR 364
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA AL RKF+R+SLGGV+DEA+IRGHRRTY+G++PGR+I G+++ G NPV LLDEIDK
Sbjct: 365 SIARALERKFVRMSLGGVRDEAEIRGHRRTYVGALPGRIIQGMRQAGSKNPVFLLDEIDK 424
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
D RGDP++ALLEVLDPEQN F+DHY+ VPFDLS V+F+ TAN IP PL DRME
Sbjct: 425 MSMDFRGDPSAALLEVLDPEQNSNFSDHYIEVPFDLSNVMFITTANLQHNIPRPLQDRME 484
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
+I + GYT EEK++IAMRHL+P+ + +HGL ++ L+I E ++ +I+ YTRE+GVRNLER
Sbjct: 485 IIYISGYTEEEKVQIAMRHLLPKQIKEHGLSNDMLKISENTIRKIIREYTRESGVRNLER 544
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A V + ++ +H L
Sbjct: 545 QIATICRKTAKLVVSDK-------ARKIHVTAQNL------------------------- 572
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
N F LG PRF AE G++ GL WT GG+ +E T
Sbjct: 573 -NQF----------------LGTPRF-RYGVAELDDQVGVATGLAWTEVGGDTLAIEVTI 614
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+G G L LTG+LG+V+KESAQ +++R RA +L + DG +DIHIH P GA
Sbjct: 615 YKGSGRLTLTGKLGEVMKESAQAGYSYIRGRAAELAI---DG-EFFDKQDIHIHIPEGAT 670
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+T+ AL S + ++VR D AMTGE+TLRG VLPVGGVK+K+LAAHR GIK
Sbjct: 671 PKDGPSAGITMACALASAITGRKVRHDVAMTGEITLRGRVLPVGGVKEKVLAAHRAGIKT 730
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
VILP+ N KDL E+P V L IL M+ VLE A
Sbjct: 731 VILPKDNKKDLDEIPKKVKDKLNFILVDHMDQVLEAAL 768
>gi|357418074|ref|YP_004931094.1| ATP-dependent serine proteinase La [Pseudoxanthomonas spadix
BD-a59]
gi|355335652|gb|AER57053.1| ATP-dependent serine proteinase La [Pseudoxanthomonas spadix
BD-a59]
Length = 814
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 348/774 (44%), Positives = 472/774 (60%), Gaps = 67/774 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V++EG+ R +V ++ R +
Sbjct: 72 GTLAQVLQL---LKLPDG--TIKVLVEGVSRVNVTDIVDRENALYGQGE----------- 115
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFVASF 163
E D D A SR+ +A A L+S+ EQ KT + LL+T+ +LAD A
Sbjct: 116 -EIDVDEAAESREIEAVARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPGRLADTIAAHL 174
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ ++ +L+++ + RL LVD + ++ ++I +V+ Q+ KSQ+E+ L +Q
Sbjct: 175 GVRLSDKQKLLETIPVGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYLNEQ 234
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELG+ DD ++L L RK+ AGMP + + EL +LK+M P R
Sbjct: 235 MKAIQKELGEMDDAPNELEDLARKIAGAGMPKPVETKAKNELNKLKQMSPMSAEAAVVRN 294
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +PW K S+ + DLKAA+E LD+DHYGL +VK+RI+EYLAV+ +GP+L
Sbjct: 295 YLDWLLGVPWNKRSK-VRKDLKAAQETLDADHYGLEKVKERILEYLAVQSRVKQMKGPIL 353
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++ L +
Sbjct: 354 CLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQNLNK 413
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN TFNDHYL V DLS V+FVAT+
Sbjct: 414 VGTRNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNHTFNDHYLEVDLDLSDVMFVATS 473
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PLLDRMEVI +PGYT EEKL IA R+L+P+ L +GL + L+I E+ V+ +
Sbjct: 474 NSLN-IPGPLLDRMEVIRIPGYTEEEKLNIAQRYLVPKQLKANGLKPDELKIEESAVRDI 532
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 533 VRYYTRESGVRNLEREIAKICRKVVKEIA-------------------------LAG--- 564
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
P E + R+ VV E LEK G RF D AE G+ GL
Sbjct: 565 ------PQPERKKGRNGAARV----VVSEKNLEKYQGVRRF-DYGRAEEANEIGLVTGLA 613
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ +E T + GKG + LTGQLGDV+KESA AL+ VRARA L + N
Sbjct: 614 WTEVGGDLLQIEVTLVPGKGGMTLTGQLGDVMKESASAALSVVRARAESLGI----DTNF 669
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
LQ +D+H+H P GA PKDGPSAG+ +VTALVS +R V+A+ AMTGE+TLRG V +GG
Sbjct: 670 LQKQDVHLHVPDGATPKDGPSAGIAMVTALVSTLTRNPVKAEVAMTGEITLRGRVSAIGG 729
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAA R GI VI+PE N KDL E+P AV ++I+ K +++VL+ A E
Sbjct: 730 LKEKLLAAMRGGITTVIIPEENRKDLAEIPEAVTKGMKIVPVKWIDEVLDLALE 783
>gi|337288531|ref|YP_004628003.1| anti-sigma H sporulation factor, LonB [Thermodesulfobacterium sp.
OPB45]
gi|334902269|gb|AEH23075.1| anti-sigma H sporulation factor, LonB [Thermodesulfobacterium
geofontis OPF15]
Length = 789
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 324/742 (43%), Positives = 467/742 (62%), Gaps = 63/742 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VV++ L R ++E Y+ +I + +IE E + P+ AL R K +L+S
Sbjct: 103 VVVQVLSRVEIKEFLQTDPYFKVKIEPCK--EIEPESI--TPEIEALMRSVKENTEKLLS 158
Query: 132 VLEQKQKTGGRTKVLLETVP-IHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+ K +L+++ +LAD+ A ++ + +L+++D RL K +E++
Sbjct: 159 L---KGILNPEISTVLQSIEEPGRLADLITAYLKLKTKTAQDLLETLDGVERLRKVSEIL 215
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
+ ++ + KI + + ++ +SQ+E+ LR+Q+RAIK ELG+ +D E D+ L +K++
Sbjct: 216 IQEIEITTLQNKIQAEAQEEIGRSQREYFLREQLRAIKRELGELEDIESDIEELRKKIKK 275
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
A MP N+ K K+L+RL+ M P R YLE + +LPW K++++ +L+LK K+
Sbjct: 276 AKMPKNVEKEALKQLKRLEFMHPDSSEAAVIRNYLEWLIELPWNKSTKD-NLNLKHVKKI 334
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DHY L +VK RI+E+LAV+K+ P A+G ++CFVGPPGVGKTSL SIA+ALGRKF+R
Sbjct: 335 LDKDHYNLEKVKDRILEFLAVKKINPKAKGAIICFVGPPGVGKTSLGKSIATALGRKFVR 394
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV+DEA+IRGHRRTY+G++PGR+I G+K+ G NPV +LDEIDK D GDPA+A
Sbjct: 395 VSLGGVRDEAEIRGHRRTYVGALPGRIIQGIKQAGTNNPVFMLDEIDKLCVDFHGDPAAA 454
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDPEQNK F DH+L+VPFDLSKV+F+ATAN + IP LLDRMEVI + GYT +EK
Sbjct: 455 LLEVLDPEQNKEFVDHFLDVPFDLSKVLFIATANMTETIPKVLLDRMEVIYISGYTFKEK 514
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
L IA RHL+P++L +HGL + + IP+ ++ +I+ YT E+GVR LER LAA+ R +
Sbjct: 515 LEIAKRHLLPKLLKEHGLTKKDIVIPDEVILKIIEEYTSESGVRELERKLAAICRKITRR 574
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
+AE E+ P +
Sbjct: 575 LAEGEK-------------------------------------------------GPFEI 585
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
E L K LGPP + + E+ G++ GL WT +GGEV +VEA M GKG L LTGQ
Sbjct: 586 TEENLVKYLGPPEYVEELKQEKDEI-GVATGLAWTPYGGEVLYVEAVTMPGKGNLILTGQ 644
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGD++KESAQ AL+++R++ + + DIH+H P+GA+PKDGPSAGVT+
Sbjct: 645 LGDIMKESAQAALSYIRSKYKEFNI----DPKFYTKYDIHVHVPSGAIPKDGPSAGVTIA 700
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
AL+S ++K V D AMTGE+TLRG +LPVGG+K+K LAA R GIK+V+LP +N KDL
Sbjct: 701 VALISALTKKPVSKDYAMTGEITLRGAILPVGGIKEKSLAALRKGIKKVLLPFKNKKDLE 760
Query: 791 EVPAAVLASLEIILAKRMEDVL 812
E+P + +E I +++V+
Sbjct: 761 EIPKDLRDQIEFIFVSHLDEVV 782
>gi|312793143|ref|YP_004026066.1| ATP-dependent protease la [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312180283|gb|ADQ40453.1| ATP-dependent protease La [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 775
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 328/745 (44%), Positives = 456/745 (61%), Gaps = 60/745 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+++EGL R V + + Y+ + + +I++E DP+ AL R A E +
Sbjct: 89 ILVEGLYRARVIKYLSTEPYFLVEVEEYKENEIKLED---DPELEALIRNV-VGAFEEFA 144
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
L K V P +LAD+ A+ + E++ ++L+ VDLK RL+K E++
Sbjct: 145 RLTNKIPPDAILSVTTIQSP-DQLADVIAANVVVKLEDKQLLLEKVDLKERLAKLYEMIL 203
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ + I + KI KV+ Q+ K+QKE+ LR+Q++AI+ ELG+ D + +++
Sbjct: 204 KEKEIIEIERKIAIKVKKQIDKTQKEYYLREQLKAIQSELGEKDSLFSEAEEYREQVKKL 263
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
G+ + V KE+ RL+K+ P P R YL+ I DLPW S+E +D+ K+ L
Sbjct: 264 GLSQESLQKVFKEIDRLEKLPPNSPEVGVIRTYLDWIVDLPWNVRSDE-KIDINVVKKVL 322
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHYGL +VK+RI+EY+AVRKLK D +GP+LC VGPPGVGKTS+A SIA AL R ++RI
Sbjct: 323 DEDHYGLTKVKERILEYIAVRKLKNDMKGPILCLVGPPGVGKTSIAKSIARALNRNYVRI 382
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGG++DEA+IRGHR+TY+G+MPGR+I L++ NP++LLDEIDK D RGDPASAL
Sbjct: 383 SLGGLRDEAEIRGHRKTYVGAMPGRIIYALRQAKTKNPLILLDEIDKMSHDFRGDPASAL 442
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLD EQN F DHY+ +PFDLS+V+F+ATAN + IP PLLDR+EVIE+ GYT EEKL
Sbjct: 443 LEVLDSEQNFAFRDHYIEIPFDLSEVMFIATANTLETIPRPLLDRLEVIEITGYTEEEKL 502
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
IA R+L+P+ ++Q+GL L+ +K +I YTRE+GVRNLER +A L R A ++
Sbjct: 503 EIARRYLLPKQMEQNGLKKSQLRCDLEAIKDIITFYTRESGVRNLEREIARLCRRVAKEI 562
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
E+ ++ + K+
Sbjct: 563 LEENKKMVRVTQKN---------------------------------------------- 576
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
LEK LG ++ E E+ GI GL WT FGGE +VEA M G G+L LTGQL
Sbjct: 577 ---LEKYLGARKYRRDELIEQNRV-GIVTGLAWTPFGGETLYVEALVMPGSGKLELTGQL 632
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDV+KESA+ A++ +R+RA +L + N + DIHIH P GA+PKDGPSAGVT+ T
Sbjct: 633 GDVMKESAKAAVSIIRSRAKELGI----DQNFYKECDIHIHVPEGAIPKDGPSAGVTMAT 688
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
A+VS S+++VR D AMTGE+TL G VLP+GGVK+K+LAA R GIK VILP N KD+ E
Sbjct: 689 AMVSALSQRKVRYDIAMTGEITLSGRVLPIGGVKEKVLAAKRVGIKNVILPFGNKKDVDE 748
Query: 792 VPAAVLASLEIILAKRMEDVLEQAF 816
+ V + I K +++V + A
Sbjct: 749 LEDYVKKDMNFIFVKTIDEVFDIAI 773
>gi|347540546|ref|YP_004847971.1| ATP-dependent protease La [Pseudogulbenkiania sp. NH8B]
gi|345643724|dbj|BAK77557.1| ATP-dependent protease La [Pseudogulbenkiania sp. NH8B]
Length = 809
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 346/801 (43%), Positives = 480/801 (59%), Gaps = 86/801 (10%)
Query: 28 KVQVGASDGKNQQEVIHW-HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELS 86
KV+VG SD ++W G+ AR + G + +V++GL RF V E
Sbjct: 91 KVEVGPSD-------LYWVGTAGLIARYITGKEGADH--------LVVQGLSRFQVLEFL 135
Query: 87 TRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVL 146
+ AR++ + + EM E + F+ Q K A+E I +L + V+
Sbjct: 136 EGWPFLVARVALI--AQPEMMTPEIEARFL----QLKERAIEAIGLLPHMPDE--LSDVV 187
Query: 147 LETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQK 206
LAD+ ++ EE+ +L++ DL RL K L+ ++ ++++ +I +K
Sbjct: 188 RGIDSPAALADMVANLIDVKVEEKQDILETFDLLRRLDKVLALLSARVEVLKLSREIGEK 247
Query: 207 VEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELR 266
Q + Q+E +LR+QMR I++ELG++++ ++ L++ + +AGMP + KH +KEL+
Sbjct: 248 TRAQFDERQREHMLREQMRQIQKELGEDEESAVEIEELKQAVATAGMPPEVQKHAEKELK 307
Query: 267 RLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRII 326
RL+++ Y R YLE + +LPW KA +D+ AA+ LD DH+GL ++K+RI+
Sbjct: 308 RLQRVGEGGTEYAMLRTYLEWLTELPW-KAEAPQPIDIAAARRVLDEDHFGLDKIKRRIL 366
Query: 327 EYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHR 386
EYLAVRKLKP+ + P+LCF GPPGVGKTSL SIA A GR F R++LGG+ DEA+IRGHR
Sbjct: 367 EYLAVRKLKPEGKSPILCFSGPPGVGKTSLGQSIARATGRAFQRVALGGLHDEAEIRGHR 426
Query: 387 RTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGS-DVRGDPASALLEVLDPEQNKTFND 445
RTYIG++PG +I L+R G + V++LDEIDK G+ GDP SALLEVLDPEQN+TF D
Sbjct: 427 RTYIGALPGNIIQALRRSGTTHTVLMLDEIDKLGAGGFHGDPGSALLEVLDPEQNRTFRD 486
Query: 446 HYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQ 505
+YL V FDLS+V+FV TAN IP PL DRME+I+LPGYT EEKL IA R+L+ R L+
Sbjct: 487 NYLGVDFDLSRVMFVCTANVLDTIPGPLRDRMEIIQLPGYTEEEKLEIARRYLVRRQLEA 546
Query: 506 HGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKD 565
+GL +E + EA + +++ YTREAGVRNLER L ++ R A+++AE E E
Sbjct: 547 NGLTAEQAGVTEAALSAIVRDYTREAGVRNLERELGSVLRRVAMRIAEGEAE-------- 598
Query: 566 VHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD 625
R+T VD L +LGP R++
Sbjct: 599 -------------------------------------RVT----VDAPDLADILGPQRYE 617
Query: 626 DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTW 685
E A R + PG++ GL WT GG++ F+EA+ + G G L LTGQLG+V+KESAQ ALT
Sbjct: 618 S-EVALRTSLPGVATGLAWTPVGGDILFIEASKVPGSGRLILTGQLGEVMKESAQAALTL 676
Query: 686 VRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRAD 745
+ D L G D+H+H PAGA PKDGPSAGV + ALVSL + K VR+D
Sbjct: 677 AKLWTGD----------SLVGIDVHVHVPAGATPKDGPSAGVAMFLALVSLLTDKPVRSD 726
Query: 746 TAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILA 805
AMTGE++LRGLVLP+GGVK+K LAA R GI V+LP RN KDL +VPA A L+ +L
Sbjct: 727 VAMTGEVSLRGLVLPIGGVKEKTLAALRAGIHTVMLPRRNQKDLEDVPAEARAKLQFVLL 786
Query: 806 KRMEDVLEQAFEGGCPWRQHS 826
R+ED + A P RQ S
Sbjct: 787 DRVEDAVRFAIGDVAPARQDS 807
>gi|345017121|ref|YP_004819474.1| anti-sigma H sporulation factor LonB [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032464|gb|AEM78190.1| anti-sigma H sporulation factor, LonB [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 778
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 325/750 (43%), Positives = 456/750 (60%), Gaps = 71/750 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R +Q+++ ++ + E K ++E+ P+ AL R +IS
Sbjct: 87 VLVEGISRAEIQQVTRDDEFFEVEVIEKEEQK----EIEKTPELEALMRS-------VIS 135
Query: 132 VLEQKQKTGGRTKV--LLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
E+ R + L + I +LAD+ A ++ + +L+ D+ RL
Sbjct: 136 AFEEYVNMTSRLPIDSLYSVISIEEPGRLADMIAAHISLNTNQSQQLLECFDVNKRLETL 195
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
+ + L+ + + +I KV Q+ K QKE+ LR+Q++AIK ELG+ D+ + ++ E+
Sbjct: 196 LGFLMKELEILNIEREINAKVRSQIDKLQKEYYLREQLKAIKAELGETDEIDQEIEEYEK 255
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K+ +P + K ++EL+RL KM P + R YL+ I DLPW +E+I LDLK
Sbjct: 256 KINEKDLPEEVRKKAKEELKRLSKMAPGSAEASVVRTYLDWILDLPWNYETEDI-LDLKR 314
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A++ LD DHYGL +VK+RIIE+LAVR + P+LC VGPPGVGKTSL SIA A+ R
Sbjct: 315 AQKILDEDHYGLKKVKERIIEFLAVRSFYNKIKSPILCLVGPPGVGKTSLGRSIARAMNR 374
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
KF+R+SLGGV+DEA+IRGHRRTY+G++PG +I+ +K G NPV LLDEIDK SD RGD
Sbjct: 375 KFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIKIAGSKNPVFLLDEIDKMSSDFRGD 434
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
PASA+LEVLDPEQN TF DHYL++PFDLSKV+F+ TAN IP PLLDRMEVI + GYT
Sbjct: 435 PASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTVDTIPAPLLDRMEVIYVSGYT 494
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EEKL IA +LIP++L +HG+ + I E+ + +I YTREAGVR LE+NL+ + R
Sbjct: 495 EEEKLHIAKDYLIPKILKEHGVPDNKIIIQESAIYGIISEYTREAGVRGLEKNLSQIVRK 554
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS 606
A K+ E+ +VI +G+
Sbjct: 555 AIKKIVEENA------------------------------QVIKVGKRN----------- 573
Query: 607 PLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELH 666
L+ LG P + +A ++ GI GL WT GGE+ VEA+ M G G+L+
Sbjct: 574 --------LQSYLGKPIYRSDKANQK-DEIGIVFGLAWTRVGGEILTVEASIMPGSGKLN 624
Query: 667 LTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAG 726
LTGQLGDV+KESAQ +++RA A L + + + DIHIH P GA+PKDGPSAG
Sbjct: 625 LTGQLGDVMKESAQAGFSYIRANAEKLNI----DKDFYKNADIHIHVPEGAIPKDGPSAG 680
Query: 727 VTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNL 786
+T+VTA+VS + V+ D AMTGE+TL G VLP+GGVK+K+LAAHR GI++VILP N
Sbjct: 681 ITMVTAMVSALKKVPVKKDVAMTGEITLTGKVLPIGGVKEKVLAAHRAGIRKVILPLENK 740
Query: 787 KDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+DL E+P +V LE +++++VL+ A
Sbjct: 741 RDLDEIPQSVKKKLEFKFVEKIDEVLDYAL 770
>gi|220904891|ref|YP_002480203.1| ATP-dependent protease La [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|302425047|sp|B8J198.1|LON_DESDA RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|219869190|gb|ACL49525.1| ATP-dependent protease La [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 880
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 335/764 (43%), Positives = 470/764 (61%), Gaps = 65/764 (8%)
Query: 55 LHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPD 114
+ + R ++ P RV +V +G+ R V+E S + A I +L ++ D
Sbjct: 121 VQVMRMLKMPDSRVKILV--QGVSRARVREFSQVEPFLEAHIETLPEATPKV-----DAT 173
Query: 115 FIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVML 174
AL R + + +++S+ + + VL +LAD+ A+ + + +L
Sbjct: 174 VEALLRSVREQSEKVLSL--RGLSSPDVLAVLQGVDDPGRLADLIAANMRMKTADAQQIL 231
Query: 175 DSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDN 234
++ D RL + R ++ V +I + K+QK++ LR+Q++AI+ ELGD
Sbjct: 232 ETEDPLDRLMLVNTQLQREVEVATVQARIQSSAREGMDKAQKDYFLREQLKAIRSELGDK 291
Query: 235 DDD-EDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
DD+ E++L +L + AGMP ++ K K+LRRL M R YL+ +A+LPW
Sbjct: 292 DDEGEEELESLRAALDKAGMPKDVRKEADKQLRRLAGMHADSSEANVVRTYLDWLAELPW 351
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
+K S + LD+ AK+ LD DH GL ++K RI+E+L+VRKL P ++GP+LCF GPPGVGK
Sbjct: 352 KKLSRD-RLDIAHAKQILDEDHCGLEKIKDRILEFLSVRKLNPQSKGPILCFAGPPGVGK 410
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSL S+A ALGRKF R+SLGG+ DEA+IRGHRRTYIG+MPGR+I LK+ G NPV++L
Sbjct: 411 TSLGRSVARALGRKFQRLSLGGMHDEAEIRGHRRTYIGAMPGRIIQSLKQAGTRNPVIVL 470
Query: 414 DEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPL 473
DE+DK G+D RGDP+SALLEVLDPEQN TF+DHYLNVPFDLSKV+F+ TAN + IP PL
Sbjct: 471 DEVDKLGADFRGDPSSALLEVLDPEQNHTFSDHYLNVPFDLSKVMFLCTANHLETIPAPL 530
Query: 474 LDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGV 533
DRMEVI LPGYT +EK IA +HL+P+ + ++GL + + + +A ++ VI+ YTREAG+
Sbjct: 531 RDRMEVITLPGYTMQEKAEIARKHLLPKKIKENGLQEKDVTLDDAALEKVIREYTREAGL 590
Query: 534 RNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGE 593
RNLER L+++ R A + AE ++
Sbjct: 591 RNLERELSSICRKLARRKAEGKK------------------------------------- 613
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
P V A +EK+LG PRF + E E+ PG+++GL WT GGEV
Sbjct: 614 ------------GPFRVSTADVEKLLGAPRFIEDEK-EKKLMPGMALGLAWTPAGGEVLT 660
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
VEAT M+GKG L LTGQLGDV+KESAQ AL+++R+RA +L + + + DIH+H
Sbjct: 661 VEATVMKGKGGLTLTGQLGDVMKESAQAALSYIRSRAEELGV----DPSFVSEYDIHVHV 716
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
PAGA PKDGPSAGVTL TAL+S + RVRAD MTGE+TL+G VLPVGG+K+KILA
Sbjct: 717 PAGATPKDGPSAGVTLTTALISALNGHRVRADLCMTGEITLQGRVLPVGGIKEKILAGVA 776
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
G+K V++P +N KDL +VP +L + + +++L FE
Sbjct: 777 RGLKHVVIPWQNTKDLEDVPKELLKRITVHPVHHYDELLPLVFE 820
>gi|121603730|ref|YP_981059.1| ATP-dependent protease La [Polaromonas naphthalenivorans CJ2]
gi|120592699|gb|ABM36138.1| ATP-dependent protease La [Polaromonas naphthalenivorans CJ2]
Length = 789
Score = 593 bits (1530), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/744 (42%), Positives = 465/744 (62%), Gaps = 63/744 (8%)
Query: 73 VLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISV 132
+ +G+ RF +Q + + AR+ ++ E E AL Q + A E++S+
Sbjct: 96 LCQGVQRFRIQSMVEGYPFLAARVRLID------EPAEPSTQAEALGLQLRERAAEILSL 149
Query: 133 LEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDR 192
L T + + P H +AD+ + + E+ ++L++ + + RL K +++
Sbjct: 150 LPGAPAELAHTLQAVRS-PSH-MADVVASLLDAELSEKQMLLETANTEERLQKVLQMLTH 207
Query: 193 HLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAG 252
++ +R++++I ++ + Q+ +Q++++LRQQ++ I++ELG++D +D+ L + AG
Sbjct: 208 RIEVLRLSQEIGERTKEQIDDTQRKYMLRQQLKTIQKELGEDDGTSEDIAQLGELIAKAG 267
Query: 253 MPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLD 312
MP+++ +KEL RL++M Y+ R YLE + +LPW + +DL A+ L+
Sbjct: 268 MPADVEAQARKELSRLQRMPDASSEYSMLRTYLEWMTELPW-TVPQASPIDLTEARRILE 326
Query: 313 SDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRIS 372
+DHYGL R+KQRI+EYLAV+KL P R P+LCFVGPPGVGKTSL SIA ALGR F+R+S
Sbjct: 327 ADHYGLERIKQRIVEYLAVQKLNPGGRAPILCFVGPPGVGKTSLGQSIAHALGRPFVRVS 386
Query: 373 LGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALL 432
LGGV DEA+IRGHRRTYIG+MPG ++ L++ G + VM+LDEIDK GDP++ALL
Sbjct: 387 LGGVHDEAEIRGHRRTYIGAMPGMIVQNLRKAGARHCVMMLDEIDKLSPSAHGDPSAALL 446
Query: 433 EVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLR 492
EVLDPEQN TF D+YL VPFDLS+V+FVATAN +P P+ DRMEVIELPGYT EEKL+
Sbjct: 447 EVLDPEQNSTFRDNYLGVPFDLSRVVFVATANVIDQVPAPVRDRMEVIELPGYTQEEKLQ 506
Query: 493 IAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVA 552
IA R+L+ R + +GL E ++ ++ +I YTREAGVR LER + + R AAV++
Sbjct: 507 IAQRYLVGRQREANGLRGEQCELTLQALQALIADYTREAGVRQLEREIGRVMRHAAVQI- 565
Query: 553 EQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDE 612
ADG++ ++ VD
Sbjct: 566 --------------------------ADGSKPQVR----------------------VDA 577
Query: 613 AMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLG 672
A L+ +LGP RF + E A R + PG++ GL WT GG++ F+EAT + G G L LTGQLG
Sbjct: 578 ADLDAILGPARF-EHETALRSSMPGVATGLAWTPVGGDILFIEATRVAGTGRLILTGQLG 636
Query: 673 DVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTA 732
+V+KESAQ ALT V+ A+ L++ AE +G D+H+H PAGA+PKDGPSAGV + A
Sbjct: 637 EVMKESAQAALTLVKGFASTLRVPAER----FEGIDVHVHVPAGAIPKDGPSAGVAMFIA 692
Query: 733 LVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEV 792
L SLF+ + V D AMTGE++LRGLVLPVGG+K+K+LAA R G++ V+LP RN KDL +V
Sbjct: 693 LASLFTDQAVHHDVAMTGEISLRGLVLPVGGIKEKVLAAQRAGVQTVLLPRRNEKDLRDV 752
Query: 793 PAAVLASLEIILAKRMEDVLEQAF 816
P + +L+ + ++D + A
Sbjct: 753 PESTREALKFVWLDHVDDAIRAAL 776
>gi|20807121|ref|NP_622292.1| ATP-dependent Lon protease [Thermoanaerobacter tengcongensis MB4]
gi|20515615|gb|AAM23896.1| ATP-dependent Lon protease, bacterial type [Thermoanaerobacter
tengcongensis MB4]
Length = 778
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 323/715 (45%), Positives = 440/715 (61%), Gaps = 69/715 (9%)
Query: 108 QVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV--LLETVPIH---KLADIFVAS 162
++E+ P+ AL R ++S E+ R + L + I +LAD+ A
Sbjct: 119 EIEKTPELEALMRS-------VVSAFEEYVNMTSRVPIESLYNVISIEEPGRLADMIAAH 171
Query: 163 FEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQ 222
+S + +L+ D+K RL + + L+ +++ +I KV Q+ K QKE+ LR+
Sbjct: 172 ISLSTAQNQELLECFDVKKRLEILLGFLMKELEILKIEREINAKVRSQIDKLQKEYYLRE 231
Query: 223 QMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSR 282
Q++AIK ELG+ +D + ++ ERK++ +P + K ++EL+RL KM P + R
Sbjct: 232 QLKAIKAELGETEDFDSEIEEYERKIEEKDLPEEVRKKAKEELKRLSKMPPGSAEASVVR 291
Query: 283 VYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPV 342
YL+ I +LPW +E+I LDLK A+ LD DHYGL +VK+RIIE+LAVR + P+
Sbjct: 292 TYLDWILELPWNYETEDI-LDLKRAQRILDEDHYGLKKVKERIIEFLAVRAFYNKVKSPI 350
Query: 343 LCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 402
LC VGPPGVGKTSL SIA A+ RKF+R+SLGGV+DEA+IRGHRRTY+G++PG +I+ +K
Sbjct: 351 LCLVGPPGVGKTSLGRSIAKAMNRKFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIK 410
Query: 403 RVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVAT 462
G NPV LLDEIDK SD RGDPASA+LEVLDPEQN TF DHYL++PFDLSKV+F+ T
Sbjct: 411 IAGSKNPVFLLDEIDKMSSDFRGDPASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITT 470
Query: 463 ANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKL 522
AN IP PLLDRMEVI + GYT EEK IA +LIP++L +HG+ + I ++ +K
Sbjct: 471 ANTTDTIPAPLLDRMEVIYISGYTEEEKFHIAKGYLIPKILKEHGVPDNKIIIQDSAIKG 530
Query: 523 VIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADG 581
+I YTREAGVR LE++LA + R A K+ E K++ LG PL
Sbjct: 531 IISEYTREAGVRGLEKHLATIVRKAIRKIMEDNVPYVKVGKKNLQSYLGKPL-------- 582
Query: 582 AEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVG 641
FR P + +++ + G +G
Sbjct: 583 --------------------FR-----------------PDKANEK------SEIGTVMG 599
Query: 642 LVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGM 701
L WT GGE+ VEA+ M G G+L+LTGQLGDV+KESAQ L+++RA A L +
Sbjct: 600 LAWTRVGGEILTVEASIMPGSGKLNLTGQLGDVMKESAQAGLSYIRANAERLGI----DK 655
Query: 702 NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPV 761
+ + DIHIH P G++PKDGPSAGVT+VTA+VS + VR D AMTGE+TL G VLP+
Sbjct: 656 DFYKNVDIHIHVPEGSIPKDGPSAGVTMVTAMVSALVKVPVRKDVAMTGEITLTGRVLPI 715
Query: 762 GGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GGVK+K+LAAHR GIKRVILP N +DL E+P +V LE +R+++VLE A
Sbjct: 716 GGVKEKVLAAHRAGIKRVILPMENKRDLDEIPQSVKKKLEFKFVERIDEVLEYAL 770
>gi|320106404|ref|YP_004181994.1| ATP-dependent protease La [Terriglobus saanensis SP1PR4]
gi|319924925|gb|ADV82000.1| ATP-dependent protease La [Terriglobus saanensis SP1PR4]
Length = 818
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 325/674 (48%), Positives = 435/674 (64%), Gaps = 68/674 (10%)
Query: 154 KLADIFVAS---FEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQ 210
+LAD FVAS F + E+Q +L++ D+ RL + + + + L+ ++ KI +V+
Sbjct: 180 RLAD-FVASSLPFLTTVEKQ-ELLETADVSARLERLNKHLAKELEVQQLRTKIQTEVQDA 237
Query: 211 LSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKK 270
+ +SQ+E+ LR+QM+AI +ELGD DD D+ L+ K+++AGMP K KEL RL++
Sbjct: 238 VQQSQREYYLREQMKAISKELGDGDDSNKDITELKEKIEAAGMPEETKKEALKELSRLQR 297
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
M P Y+ +R Y+E +A LPW K+S E + D+K A E LD DHYGL +VK RI++YL+
Sbjct: 298 MNAASPDYSLTRNYIEWLAVLPWAKSSGE-EPDIKKAAEFLDEDHYGLTKVKDRILDYLS 356
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
VR+LKPD +GP+LCFVGPPGVGKTSL SIA ALGRKF RISLGG+ DEA+IRGHRRTYI
Sbjct: 357 VRRLKPDMKGPILCFVGPPGVGKTSLGKSIARALGRKFSRISLGGMHDEAEIRGHRRTYI 416
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
G+MPG++I LKRV +PV +LDEIDK G D RGDPASALLE LDP QN TF DHYL+
Sbjct: 417 GAMPGQIIQNLKRVETNDPVFMLDEIDKLGRDFRGDPASALLETLDPAQNGTFRDHYLDQ 476
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGL-- 508
PFDLSKV+F+ TAN+ PIP PLLDRME+IEL GYT EEK+ IA ++L+PR + ++G+
Sbjct: 477 PFDLSKVLFICTANQLDPIPAPLLDRMEIIELTGYTEEEKVSIAEKYLVPRQVKENGIEA 536
Query: 509 ---GSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKD 565
G ++ + +V + YTREAGVR LE+ + + R A ++AE + E+
Sbjct: 537 VEGGEAKIEFSREALGIVARHYTREAGVRKLEQLIGTICRKQARRIAEGKTEK------- 589
Query: 566 VHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD 625
LVV +A++++ LG +
Sbjct: 590 ------------------------------------------LVVTDAVIQEFLGGYKVR 607
Query: 626 -DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALT 684
D E AER G++VGL WT GG++ F+EA M+GKG +TGQ+GDV+KES Q ALT
Sbjct: 608 VDTEIAERTKRAGVAVGLAWTPVGGDILFIEANKMKGKGNFQITGQIGDVMKESMQAALT 667
Query: 685 WVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRA 744
WVR+ A L L ++L+ D+H+H PAGA+PKDGPSAGVT+ TA+VSL + V
Sbjct: 668 WVRSNAGSLGL----DEDVLKDIDLHLHVPAGAIPKDGPSAGVTMATAIVSLLTDMPVHP 723
Query: 745 DTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAV--LASLEI 802
AMTGE+TL G VLPVGG+K+K LAA R G+K +ILP ++K VE V A + I
Sbjct: 724 LLAMTGEITLSGNVLPVGGIKEKFLAARRAGVKTIILP-IDVKPNVEEDLTVDQKAGIAI 782
Query: 803 ILAKRMEDVLEQAF 816
A R+EDVL A
Sbjct: 783 HYASRIEDVLRIAL 796
>gi|91786827|ref|YP_547779.1| ATP-dependent protease La [Polaromonas sp. JS666]
gi|91696052|gb|ABE42881.1| ATP-dependent protease La [Polaromonas sp. JS666]
Length = 792
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 328/746 (43%), Positives = 470/746 (63%), Gaps = 67/746 (8%)
Query: 73 VLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISV 132
V +G+ RF ++ L + AR+ + + Q E AL Q + A+E++++
Sbjct: 99 VCQGVERFRIEALVEGYPFLAARVQPIPEPAVISTQAE------ALGLQLRDRAVEILAL 152
Query: 133 LEQKQKTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
L T L++V P H LADI + + E+ ++L++ + RL K +++
Sbjct: 153 LPGAPAELAHT---LQSVRSPSH-LADIVASLLDAELVEKQMLLETESPEDRLPKVLQML 208
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
+ ++ +R++++I ++ + Q+ Q+++LLR+Q++AI++ELG++ DD++D+V LE +
Sbjct: 209 EHRIEVLRLSQEIGERTKEQIDLHQRKYLLREQLKAIQKELGESGDDDEDIVRLEELIAK 268
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
AGMP ++ +KEL RL++M Y+ R YLE + +LPW A +DL A+
Sbjct: 269 AGMPDDVQAQARKELGRLQRMPDASGEYSMLRTYLEWMTELPW-AAPPANPIDLGEARRI 327
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
L++DHYGL R+KQRI+E+LAV+KL P R P+LCFVGPPGVGKTSL SIA ALGR F+R
Sbjct: 328 LEADHYGLDRIKQRIVEFLAVQKLNPQGRAPILCFVGPPGVGKTSLGQSIARALGRPFVR 387
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV DEA+IRGHRRTYIG+MPG ++ L++ G + VM+LDE+DK +GDP++A
Sbjct: 388 MSLGGVHDEAEIRGHRRTYIGAMPGIIVQSLRKAGARHCVMMLDEVDKLSPSAQGDPSAA 447
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDPEQN TF D+YL +PFDLS+V+F+ATAN +P P+ DRMEVI+LPGYT EEK
Sbjct: 448 LLEVLDPEQNATFRDNYLGLPFDLSRVVFIATANVIDQVPAPMRDRMEVIDLPGYTQEEK 507
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
L+IA R+L+ R + +GL + ++ A ++ ++ YTREAGVR LER + + R AAV+
Sbjct: 508 LQIAQRYLVQRQREANGLRGDQCELTPAALQAIVADYTREAGVRQLEREIGRVMRHAAVQ 567
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
+ ADG ST +V V
Sbjct: 568 I---------------------------ADG------------STPQVR----------V 578
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
D A L+ +LG +F + E A R + PG++ GL WT GG++ F+EAT + G G L LTGQ
Sbjct: 579 DAADLDALLGATKF-EHETALRSSVPGVATGLAWTPAGGDILFIEATRVAGSGRLILTGQ 637
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESAQ ALT V++ AT L L A N D+H+H PAGA+PKDGPSAGV +
Sbjct: 638 LGDVMKESAQAALTLVKSCATALHLSA----NAFDDIDVHVHVPAGAIPKDGPSAGVAMF 693
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
AL SLF+ + VR D AMTGE++LRGLVLPVGGVK+K+LAA R G+ V+LP+RN KDL
Sbjct: 694 IALASLFANRVVRHDVAMTGEISLRGLVLPVGGVKEKVLAAQRAGVHTVLLPQRNEKDLR 753
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAF 816
+VP A +L + ++D + A
Sbjct: 754 DVPEASRQNLTFVWLNNVDDAIRVAL 779
>gi|94263344|ref|ZP_01287159.1| Peptidase S16, ATP-dependent protease La [delta proteobacterium
MLMS-1]
gi|93456299|gb|EAT06429.1| Peptidase S16, ATP-dependent protease La [delta proteobacterium
MLMS-1]
Length = 827
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 336/754 (44%), Positives = 467/754 (61%), Gaps = 77/754 (10%)
Query: 70 YIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMEL 129
Y V++ + + + E + R Y AR+ + M + +++E + + QFK A
Sbjct: 140 YQVLISAVKKLKIVEYTQRRPYLKARVEVVPMAEEHDQEIEAM--LLNIRTQFKKMA--- 194
Query: 130 ISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQL------VMLDSVDLKVRL 183
+ GG + L+ TV + L + F ++ + + L +L+ VDLK L
Sbjct: 195 --------ELGGTPEELVMTV--NALTNPFYVAYLVLSQTGLGLEQEEEILEIVDLKELL 244
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ +++ L+++ ++ KI + ++ + K Q+EF LR+Q++AIK+ELG+ DD+ DL
Sbjct: 245 NRVGHELNKKLETVEMSHKIQKGIKQDMDKRQREFFLREQLKAIKKELGE-DDENLDLKE 303
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L +++ A +P K +KEL RL ++ P P YT SR YL+ I DLPW A+E+ LD
Sbjct: 304 LRGRLEEAKLPEEARKSAEKELDRLGRISPSSPEYTVSRTYLDWILDLPWLIATED-HLD 362
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L+ A+ LD DHYGL ++K+RIIE+LAVRKLK D RGP+LCFVGPPGVGKTSL SIA +
Sbjct: 363 LERARRVLDEDHYGLDKIKKRIIEFLAVRKLKQDMRGPILCFVGPPGVGKTSLGQSIARS 422
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
+GR F+RISLGGV+DEA+IRGHRRTYIG++PGR+I L++ G NP+ +LDE+DK G D
Sbjct: 423 MGRNFVRISLGGVRDEAEIRGHRRTYIGALPGRIIQSLRKAGAHNPLFMLDEVDKLGMDF 482
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP+SALLEVLDPEQN +F+DHYL + FDLSKV+F+ TAN IP PL DRMEVIEL
Sbjct: 483 RGDPSSALLEVLDPEQNFSFSDHYLEIAFDLSKVMFITTANLLDNIPGPLKDRMEVIELT 542
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT +EKL IA RHL+P+ L+ + L ++ LQI + ++ +I+ YTREAGVRNLER + +
Sbjct: 543 GYTEDEKLHIARRHLLPKQLEANALSADDLQINDDGLRGIIRSYTREAGVRNLEREIGGV 602
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A ++ E G +EV P
Sbjct: 603 CRGVARQIVE---------------------------GHSGRLEVGP------------- 622
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
D+ L + LGP +F E R PG++ GL WT GG++ F+E M+GKG
Sbjct: 623 -------DD--LAQYLGPLKF-FAETKARTWGPGLATGLAWTPVGGDLLFIETARMQGKG 672
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
EL LTG+LG+V+KESA ALT++R+ A +L + E L D H+H P GA+PKDGP
Sbjct: 673 ELTLTGKLGEVMKESATAALTYIRSHAKELGIDEE----LFAKSDFHVHVPEGAIPKDGP 728
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
AGV +V +LVS + + V + AMTGE+TLRG VLPVGGVK+K++AA R GI RVILP
Sbjct: 729 LAGVAMVVSLVSQLTGRAVSREVAMTGEITLRGDVLPVGGVKEKVVAAVRAGIPRVILPR 788
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
N KDL E+PA LE+ L + + LE A E
Sbjct: 789 LNDKDLDELPAGTREQLEVHLVNDINEALEVALE 822
>gi|224371986|ref|YP_002606152.1| protein LonA [Desulfobacterium autotrophicum HRM2]
gi|223694705|gb|ACN17988.1| LonA [Desulfobacterium autotrophicum HRM2]
Length = 786
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 337/796 (42%), Positives = 471/796 (59%), Gaps = 89/796 (11%)
Query: 34 SDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYT 93
SD ++ V H G A L +++ + + ++++G+ RF V E +Y
Sbjct: 66 SDINSRHSVKDLHRIGTVAMILKMAKLEDNKAQ-----LLIQGISRFKVAEYVEGKSYMQ 120
Query: 94 ARISSLEMTKIEMEQ---------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
A++S LE I ++ VEQ +ALS A + GG K
Sbjct: 121 AKVSVLESRNIIRDKETRALMSNIVEQYEKIVALSPGLPA-------------EIGGMVK 167
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
+ E LAD+ ++ ++ +L+ +D+K RL K T LV+ L+ + + KI
Sbjct: 168 SIQEP---DVLADMVASTINAPIIDKQSILEILDVKKRLKKVTRLVNDQLEILEMGSKIQ 224
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ + K Q+E+ LRQQ++AI+EELG+ D++ ++ K+ + G+P K +E
Sbjct: 225 TQVKEDMDKRQREYYLRQQLKAIREELGETDNERVEIEEYRGKITANGLPEAAVKEADRE 284
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L+RL +M P Y + YL+ + LPW+K S + LD+ A+ L+ DHYGL + K+R
Sbjct: 285 LQRLSRMHPSSSEYIVASTYLDWLTTLPWQKKSRD-RLDIAEARNVLNQDHYGLEKPKKR 343
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAVRKLK D++GP+LCF GPPG GKTSL SIA ALGRKF+RI+LGG++DEA+IRG
Sbjct: 344 ILEYLAVRKLKKDSKGPILCFAGPPGTGKTSLGKSIARALGRKFVRIALGGMRDEAEIRG 403
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTY+G++PGR+I ++R G NPV +LDEIDK S GDP+SALLEVLDPEQN +F
Sbjct: 404 HRRTYVGALPGRIIQEIRRAGTNNPVFMLDEIDKVNSSYHGDPSSALLEVLDPEQNFSFT 463
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
D+Y++VPFDLS VIF+ TAN IP PL DRMEV+EL GYT +EKL+IA R+LIPR
Sbjct: 464 DNYMDVPFDLSDVIFLTTANVLHTIPAPLRDRMEVLELSGYTEDEKLKIATRYLIPRQRT 523
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK----VAEQEQEQAL 560
+GL + I + VK +I YTREAG+RNLER + ++ R A + E E E
Sbjct: 524 ANGLTRSNINITQGAVKEIIFGYTREAGLRNLEREIGSICRGVAARVAESEVESEVEMVK 583
Query: 561 PSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLG 620
KD+H +G ++ N I P VV
Sbjct: 584 VGKKDLHGY---------------------LGPVRYKPENGNEIMVPGVV---------- 612
Query: 621 PPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQ 680
VGL WT GGE+ FVEATAM+G L LTGQLG+V+KESA
Sbjct: 613 -------------------VGLAWTPTGGEILFVEATAMKGSKGLTLTGQLGEVMKESAT 653
Query: 681 IALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRK 740
A++++R+ A L +AED + DIHIH PAGA+PKDGPSAGVT++TAL+SL + K
Sbjct: 654 TAMSFIRSNAATLN-IAED---FFETHDIHIHVPAGAIPKDGPSAGVTMLTALISLITGK 709
Query: 741 RVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASL 800
V+ AMTGE+TLRG VLPVGG+KDK++AAHR GI+ +I+P+ N KDL ++P V +
Sbjct: 710 PVKKGLAMTGEITLRGEVLPVGGIKDKVIAAHRAGIRTLIIPKWNEKDLEDIPDKVKEKI 769
Query: 801 EIILAKRMEDVLEQAF 816
+ +M DV+++A
Sbjct: 770 KFNFTDKMHDVIKRAL 785
>gi|335419267|ref|ZP_08550323.1| ATP-dependent protease La [Salinisphaera shabanensis E1L3A]
gi|334897058|gb|EGM35198.1| ATP-dependent protease La [Salinisphaera shabanensis E1L3A]
Length = 809
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 328/753 (43%), Positives = 465/753 (61%), Gaps = 61/753 (8%)
Query: 65 SGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKA 124
+G + +V +G+ RF V+E R+S+ ++T ++ E D A +
Sbjct: 113 TGEGDHQLVCQGIARFRVREFIKDDE---GRLSA-KVTWLDEPAPEGDKHIDARMDNLRN 168
Query: 125 TAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLS 184
+A+E I +++Q + + + + LAD + +E+ +LD+VDL+ RL
Sbjct: 169 SALEAIELMDQPSRELAHAIRSITSAAL--LADAVAGYLGLKPKEKQQILDAVDLESRLD 226
Query: 185 KATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVAL 244
+ +D L+ +R++ +I ++ + ++ + Q++ +LR+QMR+I+ ELG+++ +++ L
Sbjct: 227 RVQSFLDYRLEVMRLSREINKQTQQRMGEHQRKAMLREQMRSIQRELGEDETVAEEVDRL 286
Query: 245 ERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDL 304
+ A +P + +ELRRL +M Y+ R YLEL+A+LPW K S++ +D+
Sbjct: 287 REALDEAKLPEEAAEQTDRELRRLSRMSDASAEYSMVRTYLELMAELPWAKLSKD-RIDI 345
Query: 305 KAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASAL 364
++E LD DHYGL ++K+RI+E+LAV KL P+ + P+LCFVGPPGVGKTSL SIA A+
Sbjct: 346 DESREILDEDHYGLDKIKRRILEHLAVHKLNPEGKAPILCFVGPPGVGKTSLGRSIARAM 405
Query: 365 GRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVR 424
R+F+R SLGGV DE++IRGHRRTY+GSMPG +ID L++ G NPV +LDE+DK G+
Sbjct: 406 NREFVRASLGGVHDESEIRGHRRTYVGSMPGSIIDHLRKAGTRNPVFMLDEMDKLGASAH 465
Query: 425 GDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPG 484
G+PASALLEVLDP QN +FNDHYL VPFDLSKV+F+ATAN IP PL DRMEVIE+PG
Sbjct: 466 GEPASALLEVLDPSQNDSFNDHYLGVPFDLSKVMFIATANVLDAIPGPLRDRMEVIEVPG 525
Query: 485 YTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALA 544
YT EEKL+IA R+L+ R L+Q GL E I + + +I YTREAG+RNL+R + A+
Sbjct: 526 YTREEKLQIAKRYLVGRQLEQAGLKREQCDIGDDTLAALISNYTREAGLRNLDREIGAIV 585
Query: 545 RAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRI 604
R AAV+VAE G P G + I
Sbjct: 586 RHAAVQVAE----------------GKP-------------------GPGRIAPEDLAEI 610
Query: 605 TSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGE 664
P VD E A R + G+S GL WT GG++ FVEA+ G G+
Sbjct: 611 LGPKRVDN---------------EIAMRTSIAGVSTGLAWTPAGGDILFVEASRAPGSGK 655
Query: 665 LHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPS 724
L +TGQLGDV+KESAQ AL+ V+ARA DL + + L DIHIH PAGA+ KDGPS
Sbjct: 656 LTITGQLGDVMKESAQAALSLVKARAADLAIE----QDRLDKSDIHIHVPAGAIKKDGPS 711
Query: 725 AGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPER 784
AGV L TALVSL + +VRAD AMTGE++LRG VLP+GGVK+K LAAH+ GIK V+LPER
Sbjct: 712 AGVALYTALVSLLTDHKVRADVAMTGEISLRGQVLPIGGVKEKTLAAHQAGIKTVMLPER 771
Query: 785 NLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
N KD ++P + + L+I +++ ++ A +
Sbjct: 772 NRKDEEDIPENIRSELDIRYVSHVDEAIDIALQ 804
>gi|320353171|ref|YP_004194510.1| ATP-dependent protease La [Desulfobulbus propionicus DSM 2032]
gi|320121673|gb|ADW17219.1| ATP-dependent protease La [Desulfobulbus propionicus DSM 2032]
Length = 792
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 330/769 (42%), Positives = 471/769 (61%), Gaps = 80/769 (10%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
+L + + P G Y +++ G +F++ Y A++ + M +E +Q+E
Sbjct: 91 YLHKLNKAPEG--YYQILVSGTKKFAISAFVDSQPYMRAKVVEVPMEIVENKQIE----- 143
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFEIS------FE 168
AL L ++ Q QK G T++ E V I+ LA+ F ++ +S E
Sbjct: 144 -AL----------LFNIRTQFQKLVGATELPQELVATINSLANPFYVAYLVSSQLNLKIE 192
Query: 169 EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIK 228
+ +L+ L L + + + L+++ ++ ++ ++ + + Q+EF LRQQ++AI+
Sbjct: 193 MEQEILEITPLHDLLHRVAMELAKRLETVEMSNQLQASMKKDMDERQREFFLRQQLQAIR 252
Query: 229 EELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELI 288
+ELG+ DDD+ ++ L+ K+ G+ V KEL RL+++ P P YT SR Y++ I
Sbjct: 253 KELGEGDDDKVEVKELKEKVAEKGLSPQARAVVDKELVRLERIPPSSPEYTVSRNYIDWI 312
Query: 289 ADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGP 348
DLPW ++ + LDL A+ L+ DHYGL ++K+RI+E+LAVRKLK D GP+LCFVGP
Sbjct: 313 LDLPWLDSTTDT-LDLLKAEADLNQDHYGLKKIKKRILEFLAVRKLKEDIHGPILCFVGP 371
Query: 349 PGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCN 408
PGVGKTSL SIA + RKF+RI+LGGV+DEA+IRGHRRTYIG++PGR+I+ LKR G N
Sbjct: 372 PGVGKTSLGQSIARTMNRKFVRIALGGVRDEAEIRGHRRTYIGALPGRIIESLKRAGSNN 431
Query: 409 PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQP 468
PV LLDEIDK G+D RGDP+SALLEVLDPEQN TF DHYL++ FDLSKV+F+ATAN
Sbjct: 432 PVFLLDEIDKLGNDFRGDPSSALLEVLDPEQNATFTDHYLDIEFDLSKVMFIATANVLDT 491
Query: 469 IPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYT 528
IP PL DRMEV+EL GYT +EK+ IA RHL+P+ L+ H L + L+IPEA ++ +I YT
Sbjct: 492 IPGPLRDRMEVVELSGYTQQEKVAIASRHLLPKQLEAHALTEDDLEIPEAAIETLIASYT 551
Query: 529 REAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEV 588
REAGVRNLER +AA+ R A ++A E+ L + + ++
Sbjct: 552 REAGVRNLEREIAAICRGTAAEIARGRSEKMLVTPEKLYDF------------------- 592
Query: 589 IPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFG 648
LGP RF E R PG++ GL WT G
Sbjct: 593 ------------------------------LGPQRFYP-EMKARSWGPGLATGLAWTPVG 621
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
G++ F+E + M+G+G L LTG+LG+V+KESA ALT++R+ A DL + E + D
Sbjct: 622 GQILFIETSKMKGRGGLTLTGKLGEVMKESATAALTYIRSHAQDLGVDEE----IFATID 677
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
+H+H P GA+PKDGPSAGV +V++LVS+ + VR D AMTGE+TLRG VLPVGG+ +K+
Sbjct: 678 LHVHVPEGAIPKDGPSAGVAMVSSLVSVILGRPVRQDVAMTGEITLRGDVLPVGGIGEKV 737
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LAA R GI+ +ILP N KD++E+P + + + +VLE A E
Sbjct: 738 LAALRAGIRELILPVLNEKDVLEIPEDIRQGVVFHYPHTIREVLEIAME 786
>gi|392940444|ref|ZP_10306088.1| ATP-dependent protease La [Thermoanaerobacter siderophilus SR4]
gi|392292194|gb|EIW00638.1| ATP-dependent protease La [Thermoanaerobacter siderophilus SR4]
Length = 778
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 324/750 (43%), Positives = 456/750 (60%), Gaps = 71/750 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R +Q+++ ++ + E K ++E+ P+ AL R +IS
Sbjct: 87 VLVEGISRAEIQQVTRDDEFFEVEVIEKEEQK----EIEKTPELEALMRS-------VIS 135
Query: 132 VLEQKQKTGGRTKV--LLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
E+ R + L + I +LAD+ A ++ + +L+ D+ RL
Sbjct: 136 AFEEYVNMTSRLPIDSLYSVISIEEPGRLADMIAAHISLNTNQSQQLLECFDVNKRLETL 195
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
+ + L+ + + +I KV Q+ K QKE+ LR+Q++AIK ELG+ D+ + ++ E+
Sbjct: 196 LGFLMKELEILNIEREINAKVRSQIDKLQKEYYLREQLKAIKAELGETDEIDQEIEEYEK 255
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K+ +P + K ++EL+RL KM P + R YL+ I DLPW +E+I LDLK
Sbjct: 256 KINEKDLPEEVRKKAKEELKRLSKMAPGSAEASVVRTYLDWILDLPWNYETEDI-LDLKR 314
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A++ LD DHYGL +VK+RIIE+LAVR + P+LC VGPPGVGKTSL SIA A+ R
Sbjct: 315 AQKILDEDHYGLKKVKERIIEFLAVRSFYNKIKSPILCLVGPPGVGKTSLGRSIARAMNR 374
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
KF+R+SLGGV+DEA+IRGHRRTY+G++PG +I+ +K G NPV LLDEIDK SD RGD
Sbjct: 375 KFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIKIAGSKNPVFLLDEIDKMSSDFRGD 434
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
PASA+LEVLDPEQN TF DHYL++PFDLSKV+F+ TAN IP PLLDRMEVI + GYT
Sbjct: 435 PASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTVDTIPAPLLDRMEVIYVSGYT 494
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EEKL IA +LIP++L +HG+ + I E+ + +I YTREAGVR LE+NL+ + R
Sbjct: 495 EEEKLHIAKDYLIPKILKEHGVPDNKIIIQESAIYGIISEYTREAGVRGLEKNLSQIVRK 554
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS 606
A K+ E+ +V+ +G+
Sbjct: 555 AIKKIVEENA------------------------------QVVKVGKRN----------- 573
Query: 607 PLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELH 666
L+ LG P + +A ++ GI GL WT GGE+ VEA+ M G G+L+
Sbjct: 574 --------LQSYLGKPIYRTDKANQKDEV-GIVFGLAWTRVGGEILTVEASIMPGSGKLN 624
Query: 667 LTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAG 726
LTGQLGDV+KESAQ +++RA A L + + + DIHIH P GA+PKDGPSAG
Sbjct: 625 LTGQLGDVMKESAQAGFSYIRANAEKLNI----DKDFYKNVDIHIHVPEGAIPKDGPSAG 680
Query: 727 VTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNL 786
+T+VTA+VS + V+ D AMTGE+TL G VLP+GGVK+K+LAAHR GI++VILP N
Sbjct: 681 ITMVTAMVSALKKVPVKKDVAMTGEITLTGKVLPIGGVKEKVLAAHRAGIRKVILPLENK 740
Query: 787 KDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+DL E+P +V LE +++++VL+ A
Sbjct: 741 RDLDEIPQSVKKKLEFKFVEKIDEVLDYAL 770
>gi|78044069|ref|YP_359193.1| ATP-dependent protease La [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996184|gb|ABB15083.1| ATP-dependent protease La [Carboxydothermus hydrogenoformans
Z-2901]
Length = 794
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 311/665 (46%), Positives = 434/665 (65%), Gaps = 59/665 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ + + E++ +L+++D+K RL E++ R L+ + + +I +V Q+ K
Sbjct: 159 RLADVVASHLPLKIEDKQRILEALDVKKRLEILLEILARELEIVEIERRINLRVRKQMEK 218
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+ LR+Q++AI+ ELG+ D+ + K++ A +P + + KE+ +L+KM P
Sbjct: 219 TQKEYYLREQLKAIQRELGEKDERVAEGEEYREKIKEAKLPKEVEEKALKEVEKLEKMPP 278
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R YL+ I LPW + +++ LD+K A++ L+ DHYGL +VK+RI+EYLAVRK
Sbjct: 279 MAAEATVVRNYLDWILALPWNRRTKD-RLDIKLAEQILEEDHYGLEKVKERILEYLAVRK 337
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LCFVGPPGVGKTSLA SIA AL RKF+RISLGGV+DEA+IRGHRRTY+G++
Sbjct: 338 LTKKMKGPILCFVGPPGVGKTSLAKSIARALERKFVRISLGGVRDEAEIRGHRRTYVGAL 397
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I G++ G NPV LLDEIDK D RGDP++ALLEVLDPEQN +F+DHY+ +PFD
Sbjct: 398 PGRIIQGMRNAGSQNPVFLLDEIDKMSMDFRGDPSAALLEVLDPEQNNSFSDHYIELPFD 457
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+F+ TAN IP PLLDRMEVI +PGYT EEKL IA ++L+P+ L +HGL + L
Sbjct: 458 LSHVLFITTANNLYNIPRPLLDRMEVIHIPGYTEEEKLVIAEKYLLPKQLKEHGLKPKNL 517
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+I +I+ YTRE+GVRNLER +A+L R AA ++
Sbjct: 518 KISTNTFLKIIREYTRESGVRNLERQIASLCRKAAKEI---------------------- 555
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAE 631
+ D E E VSN LE+ LG P R+ EA +
Sbjct: 556 ----VTDNVE---------EVKITVSN--------------LERYLGIPKYRYGIAEAED 588
Query: 632 RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
V G++ GL WT GG+V F+E + ++G G+L+LTG+LG+V+KESAQ +++R+RA
Sbjct: 589 EV---GVATGLAWTEVGGDVMFIEVSVLKGSGKLYLTGKLGEVMKESAQAGFSYIRSRAK 645
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
+L + N + D+HIH P GA+PKDGPSAG+T+ TA+VS S ++VR D AMTGE
Sbjct: 646 ELGIEE----NFHEKYDLHIHVPEGAIPKDGPSAGITMATAMVSALSGQKVRKDVAMTGE 701
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+K+KILAA R GIK +I+P N K+L E+ V L+ IL K M++V
Sbjct: 702 ITLRGKVLPIGGLKEKILAAKRAGIKTIIIPHENRKELDEISPQVKRGLKFILVKHMDEV 761
Query: 812 LEQAF 816
LE A
Sbjct: 762 LEAAL 766
>gi|376296471|ref|YP_005167701.1| ATP-dependent protease La [Desulfovibrio desulfuricans ND132]
gi|323459032|gb|EGB14897.1| ATP-dependent protease La [Desulfovibrio desulfuricans ND132]
Length = 838
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 338/755 (44%), Positives = 468/755 (61%), Gaps = 63/755 (8%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFI 116
+ R ++ P GR+ V+++GL R V+ ++ Y+ A ++ + IE E +
Sbjct: 140 IMRMLKMPDGRLK--VLVQGLARAKVRRFTSNDPYHIAELTPI----IEPEAGSLTAEQE 193
Query: 117 ALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
AL R + + ++++ + + VL +LAD+ ++ + + +L+
Sbjct: 194 ALVRSSRELSERILTL--RGISSADIMSVLNSVSDPGRLADLIASNLRMKVDAAQKILEC 251
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
V+ RL E + + ++ + KI + + K+Q++F LR+Q++AIK ELGD D
Sbjct: 252 VEPIRRLELVNEQLLKEVEVASMQNKIQTMAKEGMDKAQRDFYLREQIKAIKRELGDEGD 311
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+ +++ L + + ++GMP + K K+LRRL+ M + T R YL+ + DLPW+K
Sbjct: 312 ESEEMEELRKGLAASGMPKEVMKEAFKQLRRLETMHAESSEATVIRTYLDWMIDLPWKKL 371
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
S + LD+K A+E L++DHY L +VK+RI+EYL+VRKL P +GP+LCFVGPPGVGKTSL
Sbjct: 372 SRD-RLDIKKAEEILNTDHYDLEKVKERILEYLSVRKLNPKMKGPILCFVGPPGVGKTSL 430
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
SIA +LGRKF R+SLGG++DEA+IRGHRRTYIG+MPGR+I +K+ G NPV++LDEI
Sbjct: 431 GRSIARSLGRKFHRMSLGGMRDEAEIRGHRRTYIGAMPGRIIQAIKQCGTRNPVIMLDEI 490
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK GSD RGDP+SALLEVLDPEQN +F DHYLNVPFDLSKV+FV TAN IP PL+DR
Sbjct: 491 DKLGSDFRGDPSSALLEVLDPEQNFSFTDHYLNVPFDLSKVMFVCTANMLDSIPGPLMDR 550
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVI +PGYT +EK I R++IPR L ++GL L I + + VI+ YTREAG+RN+
Sbjct: 551 MEVIRIPGYTEQEKTVITRRYIIPRQLRENGLDEGELVISDKLAAKVIREYTREAGLRNV 610
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER + L R A K AE E+
Sbjct: 611 EREIGTLCRKMARKKAEGEK---------------------------------------- 630
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
F+IT L K+LGPPRF D E E PG++VGL WT GGE+ +E
Sbjct: 631 ---GPFKITV------NNLYKLLGPPRFLDDE-KEPTLPPGVAVGLAWTPVGGEILHIEV 680
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
T M GKG+L LTG+LGDV+KESAQ AL+ RARA DL + N RDIH+H PAG
Sbjct: 681 TTMPGKGKLILTGKLGDVMKESAQAALSIARARA-DLYGIDP---NFADNRDIHVHVPAG 736
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAGVTLVTAL+S + V D AMTGE++LRG VLPVGG+K+KILAA G+
Sbjct: 737 ATPKDGPSAGVTLVTALLSALTDTPVSPDLAMTGEISLRGRVLPVGGIKEKILAAVSRGM 796
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
K+V++P +N KDL E+P + + I +++++V
Sbjct: 797 KKVLIPAQNKKDLAEIPDELRKRITIKTIEKVDEV 831
>gi|326391010|ref|ZP_08212559.1| ATP-dependent protease La [Thermoanaerobacter ethanolicus JW 200]
gi|325992955|gb|EGD51398.1| ATP-dependent protease La [Thermoanaerobacter ethanolicus JW 200]
Length = 778
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 324/750 (43%), Positives = 456/750 (60%), Gaps = 71/750 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R +Q+++ ++ + E K ++E+ P+ AL R +IS
Sbjct: 87 VLVEGISRAEIQQVTRDDEFFEVEVIEKEEQK----EIEKTPELEALMRS-------VIS 135
Query: 132 VLEQKQKTGGRTKV--LLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
E+ R + L + I +LAD+ A ++ + +L+ D+ RL
Sbjct: 136 AFEEYVNLTSRLPIDSLYSVISIEEPGRLADMIAAHISLNTNQSQQLLECFDVNKRLETL 195
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
+ + L+ + + +I KV Q+ K QKE+ LR+Q++AIK ELG+ D+ + ++ E+
Sbjct: 196 LGFLMKELEILNIEREINAKVRSQIDKLQKEYYLREQLKAIKAELGETDEIDQEIEEYEK 255
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K+ +P + K ++EL+RL KM P + R YL+ I DLPW +E+I LDLK
Sbjct: 256 KINEKDLPEEVRKKAKEELKRLSKMAPGSAEASVVRTYLDWILDLPWNYETEDI-LDLKR 314
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A++ LD DHYGL +VK+RIIE+LAVR + P+LC VGPPGVGKTSL SIA A+ R
Sbjct: 315 AQKILDEDHYGLKKVKERIIEFLAVRSFYNKIKSPILCLVGPPGVGKTSLGRSIARAMNR 374
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
KF+R+SLGGV+DEA+IRGHRRTY+G++PG +I+ +K G NPV LLDEIDK SD RGD
Sbjct: 375 KFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIKIAGSKNPVFLLDEIDKMSSDFRGD 434
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
PASA+LEVLDPEQN TF DHYL++PFDLSKV+F+ TAN IP PLLDRMEVI + GYT
Sbjct: 435 PASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTVDTIPAPLLDRMEVIYVSGYT 494
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EEKL IA +LIP++L +HG+ + I E+ + +I YTREAGVR LE+NL+ + R
Sbjct: 495 EEEKLHIAKDYLIPKILKEHGVSDNKIIIQESAIYGIISEYTREAGVRGLEKNLSQIVRK 554
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS 606
A K+ E+ +V+ +G+
Sbjct: 555 AIKKIVEENA------------------------------QVVKVGKRN----------- 573
Query: 607 PLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELH 666
L+ LG P + +A ++ GI GL WT GGE+ VEA+ M G G+L+
Sbjct: 574 --------LQSYLGKPIYRPDKADQKDEV-GIVFGLAWTRVGGEILTVEASIMPGSGKLN 624
Query: 667 LTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAG 726
LTGQLGDV+KESAQ +++RA A L + + + DIHIH P GA+PKDGPSAG
Sbjct: 625 LTGQLGDVMKESAQAGFSYIRANAEKLNI----DKDFYKNVDIHIHVPEGAIPKDGPSAG 680
Query: 727 VTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNL 786
+T+VTA+VS + V+ D AMTGE+TL G VLP+GGVK+K+LAAHR GI++VILP N
Sbjct: 681 ITMVTAMVSALKKVPVKKDVAMTGEITLTGKVLPIGGVKEKVLAAHRAGIRKVILPLENK 740
Query: 787 KDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+DL E+P +V LE +++++VL+ A
Sbjct: 741 RDLDEIPQSVKKKLEFKFVEKIDEVLDYAL 770
>gi|354557898|ref|ZP_08977155.1| anti-sigma H sporulation factor, LonB [Desulfitobacterium
metallireducens DSM 15288]
gi|353549572|gb|EHC19013.1| anti-sigma H sporulation factor, LonB [Desulfitobacterium
metallireducens DSM 15288]
Length = 803
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 331/760 (43%), Positives = 458/760 (60%), Gaps = 78/760 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EGL R + E Y+ R+ +E D I+++ + +
Sbjct: 80 PGG--TMRVLVEGLNRGRITEFIAEEPYFKVRVEDVE------------DDIISVTSEIE 125
Query: 124 ATAMELISVLEQKQKTGGRTK-----VLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
A +I E+ K + +L +LADI + + ++ +L+S+
Sbjct: 126 ALTHGVIHQFEEYAKLSKKVPQDTLGTILGIEEPGRLADIIASHLNLKIGDKQSILESLG 185
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL + TE++ R ++ + + +I +V Q+ K+QKE+ LR+QM+AI++ELGD D+ +
Sbjct: 186 VAERLERLTEIIMREIEILELERRIGLRVRKQMEKAQKEYYLREQMKAIQKELGDKDERQ 245
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ K+ A +P+ + KE RL+KM T R YL+ I LPW K S
Sbjct: 246 VEADEYREKISQAKLPAEVEDKALKETERLEKMAQSSAEGTVVRTYLDWILALPWSKVSR 305
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ D+ A++ L+ DHYGL +VK+RI+E+LA+RKL P + P+LCFVGPPGVGKTSLA
Sbjct: 306 D-KTDINRAEKILNEDHYGLEKVKERILEFLAIRKLTPKMKSPILCFVGPPGVGKTSLAK 364
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
S++ AL RKF+R+SLGGV+DEA+IRGHRRTYIG++PGR++ G++ G NP+ LLDEIDK
Sbjct: 365 SVSRALDRKFVRMSLGGVRDEAEIRGHRRTYIGALPGRILQGMRTAGTRNPIFLLDEIDK 424
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
SD RGDPASALLEVLDPEQN +F DHYL VPFDLS+ +F+ TAN IP PLLDRME
Sbjct: 425 MASDYRGDPASALLEVLDPEQNNSFADHYLEVPFDLSQTLFILTANTLSTIPRPLLDRME 484
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI L GYT +EK+ IA ++L+P+ L HGL + L +P+ ++ ++Q YTRE+GVRNLER
Sbjct: 485 VISLSGYTEDEKVNIARKYLLPKELKIHGLKEKILTVPDEVLLKLVQGYTRESGVRNLER 544
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A L R A++ ++E E
Sbjct: 545 EIANLCRKVAMRWVKKEWE----------------------------------------- 563
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAP--GISVGLVWTNFGGEVQFVEA 656
PL+ E LE +LG PRF + AA AP G GL +T GG++ +E
Sbjct: 564 ------PHPLI--EMDLEDLLGAPRFHFQIAA---PAPEIGAVTGLAYTTVGGDILTIEV 612
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
T + GKG L LTG+LGDV+KESA LT+VRA L + ED + D+HIH P G
Sbjct: 613 TPVPGKGHLTLTGKLGDVMKESAYAGLTFVRAHVKQLG-IPED---FYEKVDLHIHVPEG 668
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A+PKDGPSAGVT+VTA+ S S++ VR+D AMTGE+TLRG VLP+GGVK+K+LAAHR GI
Sbjct: 669 AIPKDGPSAGVTMVTAMASALSKRAVRSDLAMTGEITLRGNVLPIGGVKEKVLAAHRAGI 728
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K ++LPE N KDL E+P V LE R+E+V+ A
Sbjct: 729 KVILLPEENRKDLEEIPETVQKDLEFHFVSRIEEVINLAL 768
>gi|167038048|ref|YP_001665626.1| ATP-dependent protease La [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320116457|ref|YP_004186616.1| ATP-dependent protease La [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856882|gb|ABY95290.1| ATP-dependent protease La [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319929548|gb|ADV80233.1| ATP-dependent protease La [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 778
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/750 (43%), Positives = 457/750 (60%), Gaps = 71/750 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R +Q+++ ++ + E K ++E+ P+ AL R +IS
Sbjct: 87 VLVEGISRAEIQQVTRDDEFFEVEVIEKEEQK----EIEKTPELEALMRS-------VIS 135
Query: 132 VLEQKQKTGGRTKV--LLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
E+ R + L + I +LAD+ A ++ + +L+ D+ RL
Sbjct: 136 AFEEYVNMTSRLPIDSLYSVISIEEPGRLADMIAAHISLNTNQSQQLLECFDVNKRLETL 195
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
+ + L+ + + +I KV Q+ K QKE+ LR+Q++AIK ELG+ D+ + ++ E+
Sbjct: 196 LGFLMKELEILNIEREINAKVRSQIDKLQKEYYLREQLKAIKAELGETDEIDQEIEEYEK 255
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K+ +P + K ++EL+RL KM P + R YL+ I DLPW +E+I LDLK
Sbjct: 256 KINEKDLPEEVRKKAKEELKRLSKMAPGSAEASVVRTYLDWILDLPWNYETEDI-LDLKR 314
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A++ LD DHYGL +VK+RIIE+LAVR + P+LC VGPPGVGKTSL SIA A+ R
Sbjct: 315 AQKILDEDHYGLKKVKERIIEFLAVRSFYNKIKSPILCLVGPPGVGKTSLGRSIARAMNR 374
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
KF+R+SLGGV+DEA+IRGHRRTY+G++PG +I+ +K G NPV LLDEIDK SD RGD
Sbjct: 375 KFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIKIAGSKNPVFLLDEIDKMSSDFRGD 434
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
PASA+LEVLDPEQN TF DHYL++PFDLSKV+F+ TAN IP PLLDRMEVI + GYT
Sbjct: 435 PASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTVDTIPAPLLDRMEVIYVSGYT 494
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EEKL IA +LIP++L +HG+ + I E+ + +I YTREAGVR LE+NL+ + R
Sbjct: 495 EEEKLHIAKDYLIPKILKEHGVPDNKIIIQESAIYGIISEYTREAGVRGLEKNLSQIVRK 554
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS 606
A K+ E+ +V+ +G+
Sbjct: 555 AIKKIVEENA------------------------------QVVKVGKRN----------- 573
Query: 607 PLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELH 666
L+ LG P + +A ++ GI GL WT GGE+ VEA+ M G G+L+
Sbjct: 574 --------LQSYLGKPIYRPDKANQKDEV-GIVFGLAWTRVGGEILTVEASIMPGSGKLN 624
Query: 667 LTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAG 726
LTGQLGDV+KESAQ +++RA A L + + N+ DIHIH P GA+PKDGPSAG
Sbjct: 625 LTGQLGDVMKESAQAGFSYIRANAEKLNIDKDFYKNI----DIHIHVPEGAIPKDGPSAG 680
Query: 727 VTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNL 786
+T+VTA+VS + VR D AMTGE+TL G VLP+GGVK+K+LAAHR GI +VILP+ N
Sbjct: 681 ITMVTAMVSALKKVPVRKDVAMTGEITLTGKVLPIGGVKEKVLAAHRAGIGKVILPQENK 740
Query: 787 KDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+DL E+P +V LE +++++VL+ A
Sbjct: 741 RDLDEIPQSVKRKLEFKFVEKIDEVLDFAL 770
>gi|182627120|ref|ZP_02954838.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
gi|177907509|gb|EDT70167.1| conserved hypothetical protein [Clostridium perfringens D str.
JGS1721]
Length = 776
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/748 (42%), Positives = 458/748 (61%), Gaps = 62/748 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R + E + A I +++ E D + ALSR+ K E +
Sbjct: 87 VLVEGIERAKMDEFFDKEELLEASIEKIDIDN------EIDHELEALSRKLKDDFFEFLD 140
Query: 132 VLEQKQKTG-GRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+ G L E ++K+ D+ + I E++ +L ++DLK R+ K V
Sbjct: 141 ITASSGINGVDLFDNLEEEKDLNKVTDLISSYALIKQEDKQDILQTLDLKKRIEKLIFYV 200
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
++ ++ ++I KV+ +L K Q+E+ LR+QM+ I+EELG++DD++ ++ E+ +
Sbjct: 201 KEEIEVAKIEKRIGTKVKKKLDKGQREYYLREQMKVIQEELGEDDDNKKAIIEFEKLINE 260
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
+P+ + + Q E+ +LK P +R YLE + D+PW + +E+ L++K A++
Sbjct: 261 KKLPNQVKEKAQYEISKLKASSPYSQDGGVTRTYLENLLDMPWGEFTEDT-LNIKDARKV 319
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DHYGL VK RI+EYLAV+++ RGP+LC VGPPGVGKTS+A S+A++L RKF+R
Sbjct: 320 LDKDHYGLKDVKDRILEYLAVKQISNSLRGPILCLVGPPGVGKTSIAKSVATSLNRKFVR 379
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV+DEADIRGHRRTY+G++PGR++ GLK NPV LLDEIDK G D +G+PA A
Sbjct: 380 MSLGGVRDEADIRGHRRTYVGAIPGRIVTGLKEAKSMNPVFLLDEIDKLGMDFKGNPADA 439
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEV D EQNKTF DHYL V DLS+V+F+ TAN IP PLLDRME+IE+ GYT EEK
Sbjct: 440 LLEVFDNEQNKTFRDHYLEVDVDLSEVMFITTANSLDGIPRPLLDRMELIEVSGYTYEEK 499
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
RIA ++L+P+VL +HG+ ++ + I ++ +KL+I YTRE+GVRNL+R +A + R
Sbjct: 500 FRIAKKYLVPKVLKEHGVDNKIITISDSALKLIIDSYTRESGVRNLQRQIANVIRKGIKD 559
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
+ E++++ I++ LV
Sbjct: 560 IIEKDKK-------------------------------------------NLNISTKLV- 575
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
EK LGP F E ++ G+ G+ WT +GG+ VE AM GKG L LTGQ
Sbjct: 576 -----EKYLGPKIF-SYEEIDKEDKVGVVTGMAWTAYGGDTLPVEVMAMDGKGRLELTGQ 629
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESA+ A ++VRA +L + E +DIHIH P GAVPKDGPSAGVT+
Sbjct: 630 LGDVMKESAKAAYSYVRAHMKELGIKDE----FYSKKDIHIHAPEGAVPKDGPSAGVTMT 685
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TALVS + K+V+ + AMTGE+TL G VL +GG+K+K LAA R GI VI+P+ N KD++
Sbjct: 686 TALVSALTGKKVKHNVAMTGEITLTGKVLAIGGLKEKCLAARRVGIDTVIVPKENEKDVI 745
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEG 818
++P V SL IILA +++DVLE A G
Sbjct: 746 KLPKIVKDSLNIILADKIDDVLENALVG 773
>gi|302872194|ref|YP_003840830.1| ATP-dependent protease La [Caldicellulosiruptor obsidiansis OB47]
gi|302575053|gb|ADL42844.1| ATP-dependent protease La [Caldicellulosiruptor obsidiansis OB47]
Length = 775
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 325/745 (43%), Positives = 453/745 (60%), Gaps = 60/745 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+++EGL R V + Y+ + + ++ ++E DP+ AL R A E +
Sbjct: 89 ILVEGLYRARVLRYLSTDPYFLVEVEEYKESEAKLED---DPELEALIRNV-VGAFEEFA 144
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
L K V P +LAD+ A+ + E++ ++L+ VDLK RL K E++
Sbjct: 145 RLTNKIPPDAILSVTTIQSP-DQLADVIAANVIVKLEDKQLLLEKVDLKERLVKLYEMIL 203
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ + I + KI KV+ Q+ K+QKE+ LR+Q++AI+ ELG+ D + +++
Sbjct: 204 KEKEIIEIERKIAIKVKKQIDKTQKEYYLREQLKAIQSELGEKDSLFSEAQEYREQIKKL 263
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
G+ + V KE+ RL+K+ P P R YL+ + DLPW S+E +D+ K L
Sbjct: 264 GLSEESLQKVFKEIDRLEKLPPNSPEVGVIRTYLDWVVDLPWNVRSDE-KIDINVVKNVL 322
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHYGL +VK+RI+EY+AVRKLK D +GP+LC VGPPGVGKTS+A SIA AL R ++RI
Sbjct: 323 DEDHYGLTKVKERILEYIAVRKLKNDMKGPILCLVGPPGVGKTSIAKSIARALNRNYVRI 382
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGG++DEA+IRGHR+TY+G+MPGR+I L++ NP++LLDEIDK D RGDPASAL
Sbjct: 383 SLGGLRDEAEIRGHRKTYVGAMPGRIIYALRQAKTKNPLILLDEIDKMSHDFRGDPASAL 442
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLD EQN F DHY+ +PFDLS+V+F+ATAN + IP PLLDR+EVIE+ GYT EEKL
Sbjct: 443 LEVLDSEQNFAFRDHYIEIPFDLSEVMFIATANTLETIPRPLLDRLEVIEITGYTEEEKL 502
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
IA R+L+P+ ++Q+GL L+ +K +I YTRE+GVRNLER +A L R A ++
Sbjct: 503 EIAKRYLLPKQMEQNGLKKSQLRCDPEAIKDIITFYTRESGVRNLEREIARLCRRVAKEI 562
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
E+ ++ + K+
Sbjct: 563 LEENKKMVRVTKKN---------------------------------------------- 576
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
LEK LG ++ E E+ GI GL WT FGGE +VEA M G G+L LTGQL
Sbjct: 577 ---LEKYLGARKYRRDELIEQDRV-GIVTGLAWTPFGGETLYVEALVMPGSGKLELTGQL 632
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GD++KESA+ A++ +R+RA +L + N + DIHIH P GA+PKDGPSAGVT+ T
Sbjct: 633 GDIMKESAKAAVSIIRSRAKELGI----DENFYKDCDIHIHVPEGAIPKDGPSAGVTMAT 688
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
A+VS S+++VR D AMTGE+TL G VLP+GGVK+K+LAA R GIK VILP N KD+ E
Sbjct: 689 AMVSALSQRKVRYDVAMTGEITLSGRVLPIGGVKEKVLAAKRVGIKNVILPFENKKDVDE 748
Query: 792 VPAAVLASLEIILAKRMEDVLEQAF 816
+ V + I K +++V + A
Sbjct: 749 LEDYVKKDMNFIFVKTIDEVFDIAI 773
>gi|169342286|ref|ZP_02863364.1| ATP-dependent protease La [Clostridium perfringens C str. JGS1495]
gi|169299613|gb|EDS81672.1| ATP-dependent protease La [Clostridium perfringens C str. JGS1495]
Length = 776
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/748 (42%), Positives = 457/748 (61%), Gaps = 62/748 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R + E + A I +E+ E D + ALSR+ K E +
Sbjct: 87 VLVEGIERAKMDEFFDKEELLEASIEKIEIDN------EIDHELEALSRKLKDDFFEFLD 140
Query: 132 VLEQKQKTG-GRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+ G L E ++K+ D+ + I E++ +L ++DLK R+ K V
Sbjct: 141 ITASSGINGVDLFDNLEEEKDLNKVTDLISSYALIKQEDKQDILQTLDLKKRIEKLIFYV 200
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
++ ++ ++I KV+ +L K Q+E+ LR+QM+ I+EELG++DD++ ++ E+ +
Sbjct: 201 KEEIEVAKIEKRIGTKVKKKLDKGQREYYLREQMKVIQEELGEDDDNKKAIIEFEKVINE 260
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
+P+ + + Q E+ +LK P +R YLE + D+PW + +E+ L++K A++
Sbjct: 261 KKLPNQVKEKAQYEISKLKASSPYSQDGGVTRTYLENLLDMPWGEFTEDT-LNIKDARKV 319
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DHYGL VK RI+EYLAV+++ RGP+LC VGPPGVGKTS+A S+A++L RKF+R
Sbjct: 320 LDKDHYGLKDVKDRILEYLAVKQISNSLRGPILCLVGPPGVGKTSIAKSVATSLNRKFVR 379
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV+DEADIRGHRRTY+G++PGR++ GLK NPV LLDEIDK G D +G+PA A
Sbjct: 380 MSLGGVRDEADIRGHRRTYVGAIPGRIVTGLKEAKSMNPVFLLDEIDKLGMDFKGNPADA 439
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEV D EQNKTF DHYL V DLS+V+F+ TAN IP PLLDRME+IE+ GYT EEK
Sbjct: 440 LLEVFDNEQNKTFRDHYLEVDVDLSEVMFITTANSLDGIPRPLLDRMELIEVSGYTYEEK 499
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
RIA ++L+P+VL +HG+ ++ + I ++ +KL+I YTRE+GVRNL+R +A + R
Sbjct: 500 FRIAKKYLVPKVLKEHGVDNKIITISDSALKLIIDSYTRESGVRNLQRQIANVIRKGIKD 559
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
+ E++++ I++ LV
Sbjct: 560 IIEKDKK-------------------------------------------NLNISTKLV- 575
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
EK LGP F E ++ G+ G+ WT +GG+ VE M GKG L LTGQ
Sbjct: 576 -----EKYLGPKIF-SYEEIDKEDKVGVVTGMAWTAYGGDTLPVEVMVMDGKGRLELTGQ 629
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESA+ A ++VRA +L + E +DIHIH P GAVPKDGPSAGVT+
Sbjct: 630 LGDVMKESAKAAYSYVRAHMKELGIKDE----FYSKKDIHIHAPEGAVPKDGPSAGVTMT 685
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TALVS + K+V+ + AMTGE+TL G VL +GG+K+K LAA R GI VI+P+ N KD++
Sbjct: 686 TALVSALTGKKVKHNVAMTGEITLTGKVLAIGGLKEKCLAARRVGIDTVIVPKENEKDVI 745
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEG 818
++P V SL IILA +++DVLE A G
Sbjct: 746 KLPKIVKDSLNIILADKIDDVLENALVG 773
>gi|134300398|ref|YP_001113894.1| ATP-dependent protease La [Desulfotomaculum reducens MI-1]
gi|302425049|sp|A4J7L6.1|LON_DESRM RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|134053098|gb|ABO51069.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Desulfotomaculum reducens MI-1]
Length = 810
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 325/776 (41%), Positives = 462/776 (59%), Gaps = 78/776 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A L ++ P G T V++EG+ R +++ + Y+ +
Sbjct: 66 YNIGTVAEVKQL---LKLPGG--TIRVLVEGIARAKIEKYEHQDPYFRVEVQQYS----- 115
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
E+ E+ + AL R L+ EQ K R + ++ V + +LADI
Sbjct: 116 -EEFEKGAEVEALMRS-------LVYQFEQYVKLSKRIPPETVVSVVNLEEPGRLADIIA 167
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ + E++ +L+SV++ RL K +V + L+ + + KI +V Q+ K+QKE+ L
Sbjct: 168 SHLALKIEDKQNVLESVEIVDRLEKLCGIVAKELEIVELERKINIRVRKQMEKTQKEYYL 227
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
R+QM+AI++ELG+ D+ + K+ A P + KE+ RL+KM P
Sbjct: 228 REQMKAIQKELGEKDERVAECEEFREKISKAKFPKEAEEKALKEVERLEKMPPMAAEAAV 287
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + LPW K++++ +D+ AA+E L++DHYGL K+RI EYLA+RKL +G
Sbjct: 288 VRNYLDWMLSLPWSKSTKD-RIDINAAEEVLEADHYGLKDPKERITEYLAIRKLAKKMKG 346
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL S+A AL RKF+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G
Sbjct: 347 PILCLVGPPGVGKTSLGRSVARALDRKFVRISLGGVRDEAEIRGHRRTYVGAMPGRVIQG 406
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
++ G NPV LLDEIDK SD RGDP+SALLEVLDPEQN TF+DHY+ PFDLS V+F+
Sbjct: 407 MRTAGSKNPVFLLDEIDKMASDFRGDPSSALLEVLDPEQNSTFSDHYIETPFDLSNVMFI 466
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
TAN IP PLLDRMEVI++ GYT EEKL+IA RHL+P+ + HGL E +QI E +
Sbjct: 467 TTANNMYSIPRPLLDRMEVIQISGYTEEEKLQIAKRHLMPKQIKDHGLTEEMIQISENTI 526
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
VI+ YTRE+GVRNLER +A++ R A K+ + E+ +++++
Sbjct: 527 LKVIREYTRESGVRNLERKIASICRKTAKKIVAGQAEKVKVTTQNL-------------- 572
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
E+ LG PR+ AE+ G
Sbjct: 573 -----------------------------------EQFLGIPRY-RYGVAEQNDEVGTVT 596
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
G+ WT GG+ +E T +G G + LTG+LGDV+KESAQ +++R+RA +L + E
Sbjct: 597 GMAWTEVGGDTLVIEVTTYKGTGRMTLTGKLGDVMKESAQAGYSFIRSRAQELGIDQE-- 654
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D+HIH P GA+PKDGPSAG+T+ TA+ S+ + ++VR D AMTGE+TLRG VLP
Sbjct: 655 --MFEKWDLHIHIPEGAIPKDGPSAGITMATAMASVLTGRKVRHDIAMTGEITLRGRVLP 712
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
VGG+K+K++AAHR GIK +ILP N KDL ++P + LE L ++ VL A
Sbjct: 713 VGGIKEKVMAAHRAGIKLIILPNDNKKDLEDIPVNIKKQLEFKLVDHIDQVLAIAL 768
>gi|51891499|ref|YP_074190.1| Lon protease [Symbiobacterium thermophilum IAM 14863]
gi|51855188|dbj|BAD39346.1| Lon protease [Symbiobacterium thermophilum IAM 14863]
Length = 803
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 332/764 (43%), Positives = 465/764 (60%), Gaps = 79/764 (10%)
Query: 61 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSR 120
V+ P G T VV EG+ R + + Y A ++ Q P+ S
Sbjct: 82 VKVPGG--TLKVVFEGVARARIDHYVSEEPYMRAAVA-------------QVPEPTTRSA 126
Query: 121 QFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF-EISFEEQLVML 174
+ +A +IS E+ K+ + + L+ V + +LAD A + +++ +L
Sbjct: 127 EAEALMRMVISQYERYVKSAKKVPPESLVTAVQVEEPGRLADTIAAYMTNLDMKDKQAVL 186
Query: 175 DSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDN 234
++ D+ RL + ++++ R ++ + + KI +V Q+ K+Q+E+ LR+Q++AI++ELG+
Sbjct: 187 EAFDVVERLERISDILSREMEVLDLERKINVRVRKQMEKTQREYYLREQIKAIQKELGER 246
Query: 235 DDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWE 294
DD + K++ GMP + + +E+ R +KM P R YLE + LPW
Sbjct: 247 DDRGTEAEQFREKIEKLGMPDEVKEKALREVDRFEKMPPMAAEAVVVRNYLEWLTSLPWS 306
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKT 354
+E+ D DLK A+E L+S+HYGL + K RI+EYLAVRKL +GP+LC GPPGVGKT
Sbjct: 307 TFTEDQD-DLKRAEEILESEHYGLKKPKDRILEYLAVRKLVKKMKGPILCLAGPPGVGKT 365
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
SLA S+A ALGRKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I G+++ G NPV LLD
Sbjct: 366 SLAKSVAHALGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGMRQAGSRNPVFLLD 425
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
EIDK SD RGDPASALLEVLDPEQN +F+DHY+ VPFDLS V+F+ TAN IP PLL
Sbjct: 426 EIDKMSSDFRGDPASALLEVLDPEQNHSFSDHYIEVPFDLSDVLFITTANVVWNIPRPLL 485
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRME+I + GYT +EK+ IA RHL+P+ HGL E L++ E +++ +++ YTREAGVR
Sbjct: 486 DRMELITISGYTEDEKVEIAKRHLLPKQRKDHGLSEENLEVSENVIRTIVREYTREAGVR 545
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGES 594
NLER LAAL R AA ++A
Sbjct: 546 NLERQLAALCRKAAREIA------------------------------------------ 563
Query: 595 THEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQ 652
TH+ T R+T+ L LG PR+ + ++V G++ G+V+T GG++
Sbjct: 564 THDGVQTVRVTT------QNLHTFLGAPRYQWGKKLKEDQV---GVATGMVYTETGGDIL 614
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
+E + M+GKG L LTG+LG+V+KESAQ L+++R+RA DL L ED DIHIH
Sbjct: 615 PIEVSLMKGKGSLILTGKLGEVMKESAQAGLSYIRSRARDLGL-EED---FHAKHDIHIH 670
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
P GAVPK+GPSAG+ + TA+VS + + VRAD AMTGE+TLRG VLP+GGVK+K+L AH
Sbjct: 671 VPEGAVPKEGPSAGIAMATAVVSALTNRPVRADLAMTGEITLRGRVLPIGGVKEKLLGAH 730
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
R GI +ILP N KDL E+P V L + L M++VL A
Sbjct: 731 RAGITHIILPRENEKDLEEIPGNVRKKLHVHLVDHMDEVLRLAL 774
>gi|223940653|ref|ZP_03632494.1| ATP-dependent protease La [bacterium Ellin514]
gi|223890665|gb|EEF57185.1| ATP-dependent protease La [bacterium Ellin514]
Length = 799
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 335/768 (43%), Positives = 465/768 (60%), Gaps = 66/768 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G AAR L + + + T V++EGL R ++ + Y A+I + K
Sbjct: 95 GCAARVLKMLKFPDN-----TVRVLVEGLWRIRIKGYEAQTPYLKAKIEVWKDAK----- 144
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFE 168
E + AL+R A E+I L + L P H L D+ + +S +
Sbjct: 145 -EDSIELQALTRNAHAQFQEIIK-LSPAMADQVKIAALNTEDPGH-LTDLIAVNLNLSLD 201
Query: 169 EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIK 228
E+ ML++ +K RL++ L++R + + ++ KI V +SK+Q++F LR+QMRAI+
Sbjct: 202 ERQKMLETNSVKERLTRLLPLLNREHEVLTLSSKIQTDVASSMSKTQRDFFLREQMRAIQ 261
Query: 229 EELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELI 288
ELG+ D ++ L ++ A +P + K EL RL++M P Y +R YL+ I
Sbjct: 262 RELGEGDVAATEIKNLREQIDKAPLPDDARKVAVAELERLQQMSPSMAEYGVARHYLDWI 321
Query: 289 ADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGP 348
LPW K +E+ ++L AK LD H+GL +VK R++E+LAV KLK +GP+LC VGP
Sbjct: 322 LGLPWVKVTED-KINLNDAKRILDEQHFGLPKVKDRLLEFLAVIKLKKQIKGPILCLVGP 380
Query: 349 PGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCN 408
PGVGKTSL SIA ALGRKF RI+LGG++DEA+IRGHRRTY+G++PGR+I L+R N
Sbjct: 381 PGVGKTSLGKSIADALGRKFARIALGGMRDEAEIRGHRRTYVGALPGRIIHALRRTESRN 440
Query: 409 PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQP 468
PV+LLDEIDK GSD RGDPASALLEVLDP QN TF DHYL++PFDLS+V+F+ TAN P
Sbjct: 441 PVILLDEIDKVGSDFRGDPASALLEVLDPSQNNTFTDHYLDLPFDLSRVLFITTANWLDP 500
Query: 469 IPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYT 528
I P L DR+EVIEL GYT EKL+IA R+L+PR +++G+ + +IP+A ++ +IQ YT
Sbjct: 501 IHPALRDRLEVIELAGYTESEKLQIAKRYLVPRQSNENGVTRKMFKIPDATLRRLIQDYT 560
Query: 529 REAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEV 588
REAGVR LER +AAL R AA+K+ Q +G + +
Sbjct: 561 REAGVRQLEREIAALMRKAALKIVSQ-------------------------NGNAKSVTL 595
Query: 589 IPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFG 648
P L LGP R + E AE++ GI+ GL WT G
Sbjct: 596 APKA----------------------LADYLGPVR-NFVETAEQITEIGIATGLAWTPVG 632
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
GE+ ++EAT M G+G+L LTG LG+V+KESAQ AL+++R+++ L L D D
Sbjct: 633 GEILYIEATRMPGRGQLILTGSLGEVMKESAQTALSYLRSQSRALALDLSDYAKY----D 688
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
+HIH PAGA PKDGPSAGVT+V AL SL R+RVR+D AMTGE++LRG VL VGG+K+K+
Sbjct: 689 LHIHVPAGATPKDGPSAGVTIVVALASLLMRRRVRSDIAMTGEISLRGRVLRVGGIKEKV 748
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LAA R+G+ V+LPE+N D EVP V +++ + +++ A
Sbjct: 749 LAAARFGLTHVMLPEQNSADWEEVPVEVRKKMKVHFVSHISELIPLAL 796
>gi|237745424|ref|ZP_04575904.1| DNA-binding ATP-dependent protease La [Oxalobacter formigenes
HOxBLS]
gi|229376775|gb|EEO26866.1| DNA-binding ATP-dependent protease La [Oxalobacter formigenes
HOxBLS]
Length = 815
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/747 (42%), Positives = 455/747 (60%), Gaps = 75/747 (10%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+V +G RF + E+ + AR+ ++ E+ E D Q K A+E++
Sbjct: 120 IVCQGESRFRLVEMLDGYPFLVARVEKIQ------EEPEDSVDIQGRMVQLKQRALEILQ 173
Query: 132 VLEQKQKT-----GGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
+L Q K G T L LAD+ +++ +E+ +L++ DLK R+ K
Sbjct: 174 MLPQVPKELSDSLGNVTSAAL-------LADLMTGLMDLTPDEKQEILETTDLKTRIDKL 226
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
+ L+ +RV++ I ++ +L +E LLR+Q++ I+ +LG+ DD + L
Sbjct: 227 LSHLTYRLEILRVSKDIDEQTRNRLDDRHREALLREQLKTIQNQLGEIDDASSEAAELSE 286
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K++ A MP + H KEL RLK M Y+ R YLE + +LPW +S++ D+
Sbjct: 287 KIEKANMPEEVHTHAMKELNRLKNMPESSGEYSMLRNYLEWLVELPWAISSDD-RTDINE 345
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A++ LD DHYGL +VK+RI+E+LAV KL P+ + P+LCFVGPPGVGKTSL SIA A GR
Sbjct: 346 ARQILDEDHYGLEKVKKRILEFLAVHKLNPEGKSPLLCFVGPPGVGKTSLGQSIARATGR 405
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
KF+R+S+GGV DEA+IRGHRRTYIG++PG +I ++R G N VMLLDE+DK GS V+GD
Sbjct: 406 KFVRVSMGGVHDEAEIRGHRRTYIGALPGNIIQAIRRAGTNNCVMLLDEVDKLGSGVQGD 465
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
P++ALLEVLDP QN TF D+YL VPFDLSKV+F+ TAN IP PL DR+E+I+LPGYT
Sbjct: 466 PSAALLEVLDPAQNSTFRDNYLAVPFDLSKVMFICTANMPDTIPGPLRDRLEMIQLPGYT 525
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
+EK +IA+R+LI R +++GL E +I E + +I YTREAGVRNLER + ++ R
Sbjct: 526 EQEKTQIALRYLIRRQREENGLKPENCEITENAIHDIIGHYTREAGVRNLEREIGSVFRN 585
Query: 547 AAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
AA+K+AE E+ S D+ LG+P+ + +A
Sbjct: 586 AAMKIAEGSAEKVTVDSADIPDILGAPIYEGEIA-------------------------- 619
Query: 606 SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGEL 665
R + PGI+ GL WT GG++ F+EA+ + G+ +L
Sbjct: 620 -------------------------MRSSMPGIATGLAWTPVGGDILFIEASRVPGRNKL 654
Query: 666 HLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSA 725
LTGQLG+V++ESAQ ALT V+ARA DL++ E L + +IH+H PAGA+PKDGPSA
Sbjct: 655 TLTGQLGEVMRESAQAALTLVKARAVDLKINPE----LFENSEIHVHVPAGAIPKDGPSA 710
Query: 726 GVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERN 785
GV + AL S+ K V +D AMTGE++LRGLVLPVGG+K+K+LAA R GIK V+LP RN
Sbjct: 711 GVAMFLALASVMMNKPVASDHAMTGEISLRGLVLPVGGIKEKVLAALRAGIKTVMLPARN 770
Query: 786 LKDLVEVPAAVLASLEIILAKRMEDVL 812
+DL ++P L+ + + ++D +
Sbjct: 771 KRDLDDIPEEARNQLQFVFLETVDDAI 797
>gi|254479261|ref|ZP_05092604.1| ATP-dependent protease La [Carboxydibrachium pacificum DSM 12653]
gi|214034799|gb|EEB75530.1| ATP-dependent protease La [Carboxydibrachium pacificum DSM 12653]
Length = 778
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 322/715 (45%), Positives = 438/715 (61%), Gaps = 69/715 (9%)
Query: 108 QVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV--LLETVPIH---KLADIFVAS 162
++E+ P+ AL R ++S E+ R + L + I +LAD+ A
Sbjct: 119 EIEKTPELEALMRS-------VVSAFEEYVNMTSRVPIESLYNVISIEEPGRLADMIAAH 171
Query: 163 FEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQ 222
+S + +L+ D+K RL + + L+ +++ +I KV Q+ K QKE+ LR+
Sbjct: 172 ISLSTAQNQELLECFDVKKRLEILLGFLMKELEILKIEREINAKVRSQIDKLQKEYYLRE 231
Query: 223 QMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSR 282
Q++AIK ELG+ +D + ++ ERK++ +P + K ++EL+RL KM P + R
Sbjct: 232 QLKAIKAELGETEDFDSEIEEYERKIEEKDLPEEVRKKAKEELKRLSKMPPGSAEASVVR 291
Query: 283 VYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPV 342
YL+ I +LPW +E+I LDLK A+ LD DHYGL +VK+RIIE+LAVR + P+
Sbjct: 292 TYLDWILELPWNYETEDI-LDLKRAQRILDEDHYGLKKVKERIIEFLAVRAFYNKVKSPI 350
Query: 343 LCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 402
LC VGPPGVGKTSL SIA A+ RKF+R+SLGGV+DEA+IRGHRRTY+G++PG +I+ +K
Sbjct: 351 LCLVGPPGVGKTSLGRSIAKAMNRKFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIK 410
Query: 403 RVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVAT 462
G NPV LLDEIDK D RGDPASA+LEVLDPEQN TF DHYL++PFDLSKV+F+ T
Sbjct: 411 IAGSKNPVFLLDEIDKMSHDFRGDPASAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITT 470
Query: 463 ANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKL 522
AN IP PLLDRMEVI + GYT EEK IA +LIP++L +HG+ + I ++ +K
Sbjct: 471 ANTTDTIPAPLLDRMEVIYISGYTEEEKFHIAKGYLIPKILKEHGVPDNKIIIQDSAIKG 530
Query: 523 VIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADG 581
+I YTREAGVR LE++LA + R A K+ E K++ LG PL
Sbjct: 531 IISEYTREAGVRGLEKHLATIVRKAIRKIMEDNVPYVKVGKKNLQSYLGKPL-------- 582
Query: 582 AEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVG 641
FR P + +++ G +G
Sbjct: 583 --------------------FR-----------------PDKANEKNEI------GTVMG 599
Query: 642 LVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGM 701
L WT GGE+ VEA+ M G G+L+LTGQLGDV+KESAQ L+++RA A L +
Sbjct: 600 LAWTRVGGEILTVEASIMPGSGKLNLTGQLGDVMKESAQAGLSYIRANAERLGI----DK 655
Query: 702 NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPV 761
+ + DIHIH P G++PKDGPSAGVT+VTA+VS + VR D AMTGE+TL G VLP+
Sbjct: 656 DFYKNVDIHIHVPEGSIPKDGPSAGVTMVTAMVSALMKVPVRKDVAMTGEITLTGRVLPI 715
Query: 762 GGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GGVK+K+LAAHR GIKRVILP N +DL E+P +V LE +R+++VLE A
Sbjct: 716 GGVKEKVLAAHRAGIKRVILPMENKRDLDEIPQSVKKKLEFKFVERIDEVLEYAL 770
>gi|406870855|gb|EKD21881.1| hypothetical protein ACD_87C00289G0001 [uncultured bacterium]
Length = 809
Score = 590 bits (1521), Expect = e-165, Method: Compositional matrix adjust.
Identities = 310/663 (46%), Positives = 423/663 (63%), Gaps = 54/663 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ ++ + E +L+ D + RL +EL+ + L+ V KI + ++SK
Sbjct: 181 RLADLVGSNLRLKISESQQILEETDPEKRLKLVSELLTKELEVSTVQAKIQNDAKEEMSK 240
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ LR+QM A+++ELGD D+ ++ LERK++ MP I K K+L R++ M P
Sbjct: 241 SQREYFLREQMHALQKELGDTDERTQEIDELERKIRKTKMPKPIRKEAMKQLSRMEMMHP 300
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ I D+PW K + ++ LDL AKE LD DH+GL +VK+RI+EYLAVRK
Sbjct: 301 DSSEATIIRTYIDWILDVPWLKGTTDV-LDLVKAKEVLDEDHHGLQKVKERILEYLAVRK 359
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L P +GP+LCFVGPPGVGKTSL SIA A+GRKF R+SLGG++DEA+IRGHRRTYIG+M
Sbjct: 360 LNPSTKGPILCFVGPPGVGKTSLGQSIARAMGRKFHRLSLGGMRDEAEIRGHRRTYIGAM 419
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR++ GLK V NPV ++DEIDK GSD RGDP+SALLEVLDPEQN F+DHY+N+P D
Sbjct: 420 PGRIVQGLKTVASNNPVFMMDEIDKIGSDYRGDPSSALLEVLDPEQNFEFSDHYMNLPID 479
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+F+ TAN IP PLLDRME+I L GYT EEK+ IA ++L PR L + G+ + L
Sbjct: 480 LSKVMFITTANMTDTIPGPLLDRMEMIRLSGYTLEEKVVIARKYLFPRQLKESGVKASQL 539
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
++ + +K ++ YT EAG+RNLER + + R A K+AE + S K++ R P
Sbjct: 540 KMDDETLKYIVTHYTYEAGLRNLEREIGKVCRKIARKIAEGGKGPYAVSDKNISRYLGP- 598
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
P + E+ LE+++
Sbjct: 599 ---------------------------------PKNIPESELEQLV-------------- 611
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
PG+ GL WT GGE+ +E M GKG+L LTGQLGDV+KESAQ ALT+ R+R+ +L
Sbjct: 612 -QPGLVTGLAWTEVGGEILQIEVNLMPGKGKLILTGQLGDVMKESAQAALTYCRSRSVEL 670
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
L + + D+HIH PAGA+PKDGPSAG+T+ TAL S + K V+ AMTGE+T
Sbjct: 671 GLTE----DYFEKIDLHIHVPAGAIPKDGPSAGITMATALYSAITGKIVQGKLAMTGEVT 726
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K LAA R I +VI+P++N KDL E+P + +E K M++V+
Sbjct: 727 LRGRVLPIGGLKEKALAALRADINKVIIPDQNKKDLEEIPKDIREKMEFYPVKDMDEVVR 786
Query: 814 QAF 816
AF
Sbjct: 787 IAF 789
>gi|392378850|ref|YP_004986010.1| ATP-dependent protease La [Azospirillum brasilense Sp245]
gi|356880332|emb|CCD01281.1| ATP-dependent protease La [Azospirillum brasilense Sp245]
Length = 810
Score = 590 bits (1521), Expect = e-165, Method: Compositional matrix adjust.
Identities = 330/773 (42%), Positives = 477/773 (61%), Gaps = 71/773 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G A L R V P G ++ +V +G RF + E + AR+ +E
Sbjct: 93 HRVGTTASIL---RYVTTPDG--SHHLVCQGQQRFRIVEWVPGHPFMAARVEMVE----- 142
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
E P+ +A + A+E + +L Q + LE+ +LAD+ + ++
Sbjct: 143 -ESDTATPEVMARFLNLRNEAVEALQLLPQAPQELLAAVQALESP--GELADMTASYMDL 199
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
E+ +L+++DL RL K L+ R ++ +R++ + ++ + + Q+E+LLR+Q+R
Sbjct: 200 KPAEKQEVLETIDLPERLDKVGGLLARRIEVLRLSRDLRERTREAMDERQREYLLREQLR 259
Query: 226 AIKEELGDNDDD-EDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
AI++ELG+ D+ + ++ L+ + AGMP ++ +H +KELRRL++M Y+ R Y
Sbjct: 260 AIQKELGEADEGRQAEIGELQDAIAKAGMPLDVREHAEKELRRLERMPEAAAEYSMVRSY 319
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
L+ + ++PW++ SE +D+ A+ LD DHYGL +VK+RI+E+LAVRKL P+ R P+LC
Sbjct: 320 LDWLIEMPWDRRSES-RIDIAEARRILDEDHYGLEKVKRRILEFLAVRKLNPEGRSPILC 378
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
FVGPPGVGKTSL SIA A GR F R+SLGGV DE++IRGHRRTY+G++PG ++ +++
Sbjct: 379 FVGPPGVGKTSLGQSIARATGRAFARVSLGGVHDESEIRGHRRTYVGALPGNIVQAIRKA 438
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G + V++LDE+DK G GDP++ALLEVLDPEQN TF DHYL VPFDLSKV+F+ATAN
Sbjct: 439 GTRDCVLMLDEMDKLGQGFHGDPSAALLEVLDPEQNATFRDHYLGVPFDLSKVMFIATAN 498
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
IP PL DRMEVIEL GYT +EKL IA R+L+ R L +GL ++ L+IP+ ++ +I
Sbjct: 499 MLDTIPGPLRDRMEVIELSGYTEDEKLEIAKRYLLARQLAANGLTADQLEIPDDTLRAII 558
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAE 583
+ +TREAG R LER + A+ R AAV++AE E E+ D+ LG P +N
Sbjct: 559 RDHTREAGNRQLERLIGAVGRYAAVRIAEGEVERMRVEPADLTAILGPPRFEN------- 611
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
+ A R + PG++ GL
Sbjct: 612 --------------------------------------------DVAMRTSVPGVATGLA 627
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ F+EA+ G G L LTGQLG+V+KESAQ AL+ V++R DL L E G++
Sbjct: 628 WTPVGGDILFIEASRFSGSGRLILTGQLGEVMKESAQAALSLVKSRVKDLGLDPE-GLDR 686
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
DIHIH PAGA+PKDGPSAGV + TALVSL S + +R+DTAMTGE++LRGLVLPVGG
Sbjct: 687 F---DIHIHVPAGAIPKDGPSAGVAIFTALVSLLSGRCIRSDTAMTGEISLRGLVLPVGG 743
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+++K++AA R G+K V+LP RN KD ++PAAV L + +R++D + A
Sbjct: 744 IREKVVAAQRAGLKTVMLPARNRKDFDDIPAAVRERLSFVWLERVDDAVRAAL 796
>gi|110799208|ref|YP_696085.1| ATP-dependent protease La [Clostridium perfringens ATCC 13124]
gi|168212105|ref|ZP_02637730.1| ATP-dependent protease La [Clostridium perfringens B str. ATCC
3626]
gi|422346056|ref|ZP_16426970.1| ATP-dependent protease La [Clostridium perfringens WAL-14572]
gi|110673855|gb|ABG82842.1| ATP-dependent protease La [Clostridium perfringens ATCC 13124]
gi|170709989|gb|EDT22171.1| ATP-dependent protease La [Clostridium perfringens B str. ATCC
3626]
gi|373226678|gb|EHP49000.1| ATP-dependent protease La [Clostridium perfringens WAL-14572]
Length = 776
Score = 590 bits (1521), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/748 (42%), Positives = 457/748 (61%), Gaps = 62/748 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R + E + A I +++ E D + ALSR+ K E +
Sbjct: 87 VLVEGIERAKMDEFFDKEELLEASIEKIDIDN------EIDHELEALSRKLKDDFFEFLD 140
Query: 132 VLEQKQKTG-GRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+ G L E ++K+ D+ + I E++ +L ++DLK R+ K V
Sbjct: 141 ITASSGINGVDLFDNLEEEKDLNKVTDLISSYALIKQEDKQDILQTLDLKKRIEKLIFYV 200
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
++ ++ ++I KV+ +L K Q+E+ LR+QM+ I+EELG++DD++ ++ E+ +
Sbjct: 201 KEEIEVAKIEKRIGTKVKKKLDKGQREYYLREQMKVIQEELGEDDDNKKAIIEFEKVINE 260
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
+P+ + + Q E+ +LK P +R YLE + D+PW + +E+ L++K A++
Sbjct: 261 KKLPNQVKEKAQYEISKLKASSPYSQDGGVTRTYLENLLDMPWGEFTEDT-LNIKDARKV 319
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DHYGL VK RI+EYLAV+++ RGP+LC VGPPGVGKTS+A S+A++L RKF+R
Sbjct: 320 LDKDHYGLKDVKDRILEYLAVKQISNSLRGPILCLVGPPGVGKTSIAKSVATSLNRKFVR 379
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV+DEADIRGHRRTY+G++PGR++ GLK NPV LLDEIDK G D +G+PA A
Sbjct: 380 MSLGGVRDEADIRGHRRTYVGAIPGRIVTGLKEAKSMNPVFLLDEIDKLGMDFKGNPADA 439
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEV D EQNKTF DHYL V DLS+V+F+ TAN IP PLLDRME+IE+ GYT EEK
Sbjct: 440 LLEVFDNEQNKTFRDHYLEVDVDLSEVMFITTANSLDGIPRPLLDRMELIEVSGYTYEEK 499
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
RIA ++L+P+VL +HG+ ++ + I ++ +KL+I YTRE+GVRNL+R +A + R
Sbjct: 500 FRIAKKYLVPKVLKEHGVDNKIITISDSALKLIIDSYTRESGVRNLQRQIANVIRKGIKD 559
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
+ E++++ I++ LV
Sbjct: 560 IIEKDKK-------------------------------------------NLNISTKLV- 575
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
EK LGP F E ++ G+ G+ WT +GG+ VE M GKG L LTGQ
Sbjct: 576 -----EKYLGPKIF-SYEEIDKEDKVGVVTGMAWTAYGGDTLPVEVMVMDGKGRLELTGQ 629
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESA+ A ++VRA +L + E +DIHIH P GAVPKDGPSAGVT+
Sbjct: 630 LGDVMKESAKAAYSYVRAHMKELGIKDE----FYSKKDIHIHAPEGAVPKDGPSAGVTMT 685
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TALVS + K+V+ + AMTGE+TL G VL +GG+K+K LAA R GI VI+P+ N KD++
Sbjct: 686 TALVSALTGKKVKHNVAMTGEITLTGKVLAIGGLKEKCLAARRVGIDTVIVPKENEKDVI 745
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEG 818
++P V SL IILA +++DVLE A G
Sbjct: 746 KLPKIVKDSLNIILADKIDDVLENALVG 773
>gi|223934869|ref|ZP_03626788.1| ATP-dependent protease La [bacterium Ellin514]
gi|223896322|gb|EEF62764.1| ATP-dependent protease La [bacterium Ellin514]
Length = 833
Score = 590 bits (1521), Expect = e-165, Method: Compositional matrix adjust.
Identities = 335/782 (42%), Positives = 485/782 (62%), Gaps = 69/782 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
GVAA L L R +P G + ++ ++ + RF+++++ + A + L +
Sbjct: 104 GVAANVLKLIR---QPDG--SAVIAVQAMRRFAIRKVVLTHPFIKAEVEVL----WPIMP 154
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFEISF 167
++D +F A R + TA+ LI V + + + ++E + ++AD ++ +
Sbjct: 155 PKEDKEFEAAVRNLRETALRLIKVTPDVPE---QARAIIEGMQDPGQMADFLASNLNMEV 211
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
++ +L+ +D+ R+ V + ++ +K+ Q V Q + +Q+ LR+Q++AI
Sbjct: 212 PDKQQLLEELDVAKRVRAVQLRVSSQYEIAQLQQKLQQDVASQFTDAQRRAYLREQIKAI 271
Query: 228 KEELGDNDDDEDDLVA-LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLE 286
+ ELG+ + D+ + L ++++ A +P + + +KEL+RL+ + P + YLE
Sbjct: 272 QRELGEEPEGADEQIEELRKELEEAQLPPEVMEQAEKELKRLRALPQASPEVSVIVGYLE 331
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
+ADLPW K SE+ +LDL A++ LD DHY L +VK+R+IE+LAVRKL P RGP+LCF+
Sbjct: 332 SLADLPWNKRSED-NLDLNQAQKILDRDHYDLEKVKRRLIEFLAVRKLNPRGRGPILCFL 390
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTSL SIA ALGRKF R+SLGG++DEA+IRGHRRTYIGSMPGR+I ++RVG
Sbjct: 391 GPPGVGKTSLGQSIADALGRKFARMSLGGIRDEAEIRGHRRTYIGSMPGRIIQEMRRVGT 450
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NPV++LDEIDK G+D RGDPASALLEVLDP QN F D Y++VPFDLS+VIF+ATAN
Sbjct: 451 KNPVIMLDEIDKLGADFRGDPASALLEVLDPRQNNAFVDRYIDVPFDLSEVIFIATANYM 510
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
+P PL DRMEVIELPGYT EKL IA +L+ R L+++GL E Q ++ + VI+
Sbjct: 511 DAVPAPLRDRMEVIELPGYTEREKLEIAKNYLVVRQLEENGLKPEQCQWEKSALSRVIED 570
Query: 527 YTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEM 586
YTREAGVR LER + A+ R A +VA E + M
Sbjct: 571 YTREAGVRELERQIGAVCRGIAARVARGEIQA---------------------------M 603
Query: 587 EVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTN 646
V P +++++LGPPR+ RE + + PG+ GL +T
Sbjct: 604 TVTPQ----------------------IVQEMLGPPRY-IRETRLKTSKPGVVTGLAYTP 640
Query: 647 FGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQG 706
GGEV F+EAT GKG + LTGQ+G+V++ES Q AL+ VR+R +L + A+ ++
Sbjct: 641 IGGEVLFIEATRYPGKGNITLTGQIGNVMRESVQAALSLVRSRVKELGISADAFRDM--- 697
Query: 707 RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKD 766
DIH+H P+GAVPKDGPSAGV + TA+ SLFS VR++ AMTGE+TLRGLVLP+GG+K+
Sbjct: 698 -DIHVHVPSGAVPKDGPSAGVAMFTAIASLFSDTPVRSEVAMTGEVTLRGLVLPIGGLKE 756
Query: 767 KILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHS 826
K LAA R GI+ VI+P+ N KDL ++P V L+ LA+ ++DVL A E + H+
Sbjct: 757 KTLAALRAGIEEVIIPKLNEKDLFDLPEEVKNKLKFTLAENVDDVLRAALEREEEEKIHN 816
Query: 827 KL 828
+L
Sbjct: 817 RL 818
>gi|18310372|ref|NP_562306.1| ATP-dependent protease La [Clostridium perfringens str. 13]
gi|168207809|ref|ZP_02633814.1| ATP-dependent protease La [Clostridium perfringens E str. JGS1987]
gi|18145052|dbj|BAB81096.1| ATP-dependent protease La [Clostridium perfringens str. 13]
gi|170660873|gb|EDT13556.1| ATP-dependent protease La [Clostridium perfringens E str. JGS1987]
Length = 776
Score = 590 bits (1521), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/748 (42%), Positives = 457/748 (61%), Gaps = 62/748 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R + E + A I +++ E D + ALSR+ K E +
Sbjct: 87 VLVEGIERAKMDEFFDKEELLEASIEKIDIDN------EIDHELEALSRKLKDDFFEFLD 140
Query: 132 VLEQKQKTG-GRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+ G L E ++K+ D+ + I E++ +L ++DLK R+ K V
Sbjct: 141 ITASSGINGVDLFDNLEEEKDLNKVTDLISSYALIKQEDKQDILQTLDLKKRIEKLIFYV 200
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
++ ++ ++I KV+ +L K Q+E+ LR+QM+ I+EELG++DD++ ++ E+ +
Sbjct: 201 KEEIEVAKIEKRIGTKVKKKLDKGQREYYLREQMKVIQEELGEDDDNKKAIIEFEKVINE 260
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
+P+ + + Q E+ +LK P +R YLE + D+PW + +E+ L++K A++
Sbjct: 261 KKLPNQVKEKAQYEISKLKASSPYSQDGGVTRTYLENLLDMPWGEFTEDT-LNIKDARKV 319
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DHYGL VK RI+EYLAV+++ RGP+LC VGPPGVGKTS+A S+A++L RKF+R
Sbjct: 320 LDKDHYGLKDVKDRILEYLAVKQISNSLRGPILCLVGPPGVGKTSIAKSVATSLNRKFVR 379
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV+DEADIRGHRRTY+G++PGR++ GLK NPV LLDEIDK G D +G+PA A
Sbjct: 380 MSLGGVRDEADIRGHRRTYVGAIPGRIVTGLKEAKSMNPVFLLDEIDKLGMDFKGNPADA 439
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEV D EQNKTF DHYL V DLS+V+F+ TAN IP PLLDRME+IE+ GYT EEK
Sbjct: 440 LLEVFDNEQNKTFRDHYLEVDVDLSEVMFITTANSLDGIPRPLLDRMELIEVSGYTYEEK 499
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
RIA ++L+P+VL +HG+ ++ + I ++ +KL+I YTRE+GVRNL+R +A + R
Sbjct: 500 FRIAKKYLVPKVLKEHGVDNKIITISDSALKLIIDSYTRESGVRNLQRQIANVIRKGIKD 559
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
+ E++++ S+K
Sbjct: 560 IIEKDKKNLNISTK---------------------------------------------- 573
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
++EK LGP F E ++ G+ G+ WT +GG+ VE M GKG L LTGQ
Sbjct: 574 ---LVEKYLGPKIF-SYEEIDKEDKVGVVTGMAWTAYGGDTLPVEVMVMDGKGRLELTGQ 629
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESA+ A ++VRA +L + E +DIHIH P GAVPKDGPSAGVT+
Sbjct: 630 LGDVMKESARAAYSYVRAHMKELGIKDE----FYSKKDIHIHAPEGAVPKDGPSAGVTMT 685
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TALVS + K+V+ + AMTGE+TL G VL +GG+K+K LAA R GI VI+P+ N KD++
Sbjct: 686 TALVSALTGKKVKHNVAMTGEITLTGKVLAIGGLKEKCLAARRVGIDTVIVPKENEKDVI 745
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEG 818
++P V SL IILA +++DVLE A G
Sbjct: 746 KLPKIVKDSLNIILADKIDDVLENALVG 773
>gi|251798421|ref|YP_003013152.1| ATP-dependent protease La [Paenibacillus sp. JDR-2]
gi|247546047|gb|ACT03066.1| ATP-dependent protease La [Paenibacillus sp. JDR-2]
Length = 836
Score = 590 bits (1521), Expect = e-165, Method: Compositional matrix adjust.
Identities = 325/757 (42%), Positives = 481/757 (63%), Gaps = 22/757 (2%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVE-QDPDFIALSRQF 122
P+G T V++EG+ R V + +Y E+T +E+ + E DP+ AL R
Sbjct: 84 PNG--TIRVLVEGVVRAEVVDYVPNEQFY-------EVTVLELPEPETDDPEVDALMRSV 134
Query: 123 KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
+ IS+ K+ T + + +LAD+ + + +++ +L+++D++ R
Sbjct: 135 LSQFEHYISL--SKKVTPETLAAVSDIDEPGRLADVITSHLSLKIKDKQDILETIDVRER 192
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L + ++++ + + + KI Q+V+ Q+ K+QKE+ LR+QM+AI++ELG+ + ++
Sbjct: 193 LERLLDILNNEREVLELERKINQRVKKQMEKTQKEYYLREQMKAIQKELGEKEGRAGEVE 252
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
L ++ AG+P+N+ + V+KE+ RL+KM R Y++ + LPW K +E+ DL
Sbjct: 253 ELRNQLAEAGVPANVREKVEKEIDRLEKMPATSAEGGVIRNYIDWLLALPWSKHTED-DL 311
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
L A+E L++DHYGL + K+R++EYLAV++L +GP+LC VGPPGVGKTSLA SIA
Sbjct: 312 SLSKAEEILNNDHYGLEKPKERVLEYLAVQQLVKKMKGPILCLVGPPGVGKTSLARSIAK 371
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
+L RKF+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV LLDEIDK SD
Sbjct: 372 SLDRKFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGSYNPVFLLDEIDKMASD 431
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
RGDP+SALLEVLDPEQN TF+DH++ VPFDLS V+FV TAN IP PLLDRMEV+ +
Sbjct: 432 FRGDPSSALLEVLDPEQNNTFSDHFIEVPFDLSNVMFVTTANSLHNIPRPLLDRMEVLYI 491
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
PGYT EK +IA R+L+P+ +HGL + L + + +V +I+ YTRE+GVRNLE+ +AA
Sbjct: 492 PGYTELEKQQIAERYLLPKQRREHGLAEDQLVVEDEVVLQLIREYTRESGVRNLEQQIAA 551
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHR---LGSPLLDNRLADGAEVEMEVIPMGESTHEVS 599
L+R AA + E +++ SK+ G P L + + +
Sbjct: 552 LSRKAAKHIV-SEGSKSVAGSKERGEEDLAGQPYEAPELNTLEAAFGADDDAAAAEEKQA 610
Query: 600 NTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAM 659
L V +L++ LGP +F AE G GL WT GG+ +E T M
Sbjct: 611 QAEVSAVTLTVTPDLLKEWLGPAKF-RHGTAEVENQIGAVTGLAWTEVGGDTLVIEVTVM 669
Query: 660 RGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVP 719
G G+L LTG+LGDV+KESAQ A ++ R++A +L + E +N +DIHIH P GA+P
Sbjct: 670 PGSGKLTLTGKLGDVMKESAQAAFSYTRSKAIELGIDPEFHVN----KDIHIHIPEGAIP 725
Query: 720 KDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRV 779
KDGPSAG+T+ TAL+S + + V + AMTGE+TLRG VLP+GG+K+K LAAHR GI++V
Sbjct: 726 KDGPSAGITMATALISALTNRYVSKEVAMTGEITLRGRVLPIGGLKEKSLAAHRAGIRKV 785
Query: 780 ILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+LP+ N +DL ++P +V +++ + M++VL+ A
Sbjct: 786 LLPKDNERDLSDIPDSVRSAMTFVPVSHMDEVLQHAL 822
>gi|149278727|ref|ZP_01884862.1| ATP-dependent protease La [Pedobacter sp. BAL39]
gi|149230346|gb|EDM35730.1| ATP-dependent protease La [Pedobacter sp. BAL39]
Length = 825
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/772 (41%), Positives = 460/772 (59%), Gaps = 70/772 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A H+ + ++ P G T V+++G RF + E Y IS E TK
Sbjct: 101 NNVGTVA---HIIKMLQMPDGNTT--VIIQGKQRFRLVEEVQSEPYIKVTISKFEETK-- 153
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
+ D +F AL K + ++I + G +E+ L + ++
Sbjct: 154 ---YKTDKEFKALVSSIKEMSSQIIQLSPNIPSEAGIALKNIESTSF--LINFISSNMNA 208
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
++ ML+ +L+ R EL+ LQ + + +I KV L K Q+++ L QQ++
Sbjct: 209 DVSDKQKMLEMANLRERAMMVMELLTLELQMLELKNQIQSKVRTDLDKQQRDYFLNQQLK 268
Query: 226 AIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYL 285
I+EELG N D + L+++ + + +H KEL +L +M P P Y+ YL
Sbjct: 269 TIQEELGGNSSDLE-YETLQQRAFKKKWSAQVSEHFNKELEKLGRMNPAAPDYSVQINYL 327
Query: 286 ELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCF 345
EL+ DLPW +++ + DLK A+ LD DH+GL +VKQRIIEYLAV KLK D + P++C
Sbjct: 328 ELLLDLPWNDFTKD-NFDLKRAQRVLDKDHFGLEKVKQRIIEYLAVLKLKRDMKAPIICL 386
Query: 346 VGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVG 405
VGPPGVGKTSL SIA AL RK++R++LGG++DEA+IRGHR+TYIG+MPGR+I +K+ G
Sbjct: 387 VGPPGVGKTSLGKSIAKALNRKYVRMALGGIRDEAEIRGHRKTYIGAMPGRIIQSIKKAG 446
Query: 406 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 465
NPV +LDEIDK G+D RGDP+SALLEVLDPEQN FNDHY+ +DLS V+F+ATAN
Sbjct: 447 AANPVFVLDEIDKVGADFRGDPSSALLEVLDPEQNSAFNDHYVEADYDLSNVLFIATANS 506
Query: 466 AQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQ 525
I P LLDRME+IE+ GYT EEK+ IA ++L+P+ +QHG+ ++ + + A+++ VI+
Sbjct: 507 LANIQPALLDRMEIIEVNGYTIEEKIEIAKKYLLPKQKEQHGIKTKDISLKNALIEKVIE 566
Query: 526 RYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEV 584
YTRE+GVR+LE+ + +L R A K+A +E + +++DV R LG+PL D L +G EV
Sbjct: 567 DYTRESGVRSLEKKIGSLVRGVATKIAMEETYEPNLNNEDVERILGAPLYDKDLYEGNEV 626
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
G+ GL W
Sbjct: 627 ---------------------------------------------------AGVVTGLAW 635
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GG++ F+EA+ GKG+L LTG LG+V+KESA IAL ++R+ A + +L
Sbjct: 636 TQVGGDILFIEASLSPGKGKLTLTGNLGEVMKESAVIALAYLRSHADTFGI----DYDLF 691
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
DIH+H PAGA PKDGPSAG+T++TAL S F++++V+++ AMTGE+TLRG VLPVGG+
Sbjct: 692 DNWDIHVHVPAGATPKDGPSAGITMLTALTSAFTQRKVKSNLAMTGEITLRGKVLPVGGI 751
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K+KILAA R IK +IL + N KD++++ + + L M +V+E A
Sbjct: 752 KEKILAAKRANIKDIILCKSNKKDILDIKESYIKDLRFHYVSEMREVIELAL 803
>gi|304407485|ref|ZP_07389137.1| ATP-dependent protease La [Paenibacillus curdlanolyticus YK9]
gi|304343436|gb|EFM09278.1| ATP-dependent protease La [Paenibacillus curdlanolyticus YK9]
Length = 790
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 331/754 (43%), Positives = 470/754 (62%), Gaps = 63/754 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EG+ R V + +Y I L EQ +D + AL R
Sbjct: 84 PNG--TIRVLVEGVVRAEVLDYLPNEEFYEVMIKELP------EQESEDSETDALMRTVL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I++ K+ T + + +LAD+ + + ++ +L++VD++ RL
Sbjct: 136 SQFENYINL--SKKVTPETLAAVSDIDEPGRLADVITSHLSLKIRDKQDILETVDVRQRL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K +++ + + + KI Q+V+ Q+ K+QKE+ LR+QM+AI++ELGD + ++
Sbjct: 194 EKLLDILHNEREVLELERKINQRVKKQMEKTQKEYYLREQMKAIQKELGDKEGRAGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEE-IDL 302
L +++ AG+P + + V+KE+ RL+KM R Y++ + LPW K EE IDL
Sbjct: 254 LRSQLEEAGLPEKVKEKVEKEIDRLEKMPSTSAEGGVIRNYIDWLLSLPWNKGDEEGIDL 313
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
DL+ A+E L+ DHYGL + K+R++EYLAV+KL +GP+LC VGPPGVGKTS+A SIA
Sbjct: 314 DLERAEEILNEDHYGLDKPKERVLEYLAVQKLVQKLKGPILCLVGPPGVGKTSIARSIAK 373
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
+LGRKF+RISLGGV+DEA+IRGHRRTY+G+MPGR++ G+K G NPV LLDEIDK D
Sbjct: 374 SLGRKFVRISLGGVRDEAEIRGHRRTYVGAMPGRIMQGMKTAGTLNPVFLLDEIDKMAMD 433
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
RGDPA+ALLEVLDPEQN TF+DH++ VPFDLS V+FV TAN +P PLLDRME++ +
Sbjct: 434 FRGDPAAALLEVLDPEQNSTFSDHFIEVPFDLSNVMFVTTANGLHNVPRPLLDRMEILSI 493
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
PGYT EKL+IA R+L+P+ +HGL L + + ++ VI+ YTREAGVRNLE+ LAA
Sbjct: 494 PGYTELEKLQIAERYLLPKQKKEHGLEENQLVVDDGALQQVIREYTREAGVRNLEQQLAA 553
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
L R AA ++ SKD DG
Sbjct: 554 LCRKAAKQIV----------SKD-------------HDG--------------------- 569
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
S ++VD +++ LGP +F + AE+ G GL WT GG+ +E T M+G
Sbjct: 570 ---SVIIVDSDKIKEWLGPIKFRYGQ-AEQDDQIGAVTGLAWTEVGGDTLVIEVTVMQGS 625
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
G+L LTG+LGDV+KESAQ A +++R++A +L + E + DIHIH P GA+PKDG
Sbjct: 626 GKLTLTGKLGDVMKESAQAAFSYMRSKAAELNIDPE----FHEKNDIHIHIPEGAIPKDG 681
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAG+T+ TAL+S + + V D AMTGE+TLRG VLP+GG+K+K LAAHR GIK+V+LP
Sbjct: 682 PSAGITMATALISALTNRPVSRDVAMTGEITLRGRVLPIGGLKEKSLAAHRAGIKKVLLP 741
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+ N DLV+VP ++ A + I M++VL+ A
Sbjct: 742 KGNEHDLVDVPESIRAEMTFIPVAHMDEVLQHAL 775
>gi|422874314|ref|ZP_16920799.1| ATP-dependent protease La [Clostridium perfringens F262]
gi|380304791|gb|EIA17077.1| ATP-dependent protease La [Clostridium perfringens F262]
Length = 776
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/748 (42%), Positives = 457/748 (61%), Gaps = 62/748 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R + E + A I +++ E D + ALSR+ K E +
Sbjct: 87 VLVEGIERAKMDEFFDKEELLEASIEKIDIDN------EIDHELEALSRKLKDDFFEFLD 140
Query: 132 VLEQKQKTG-GRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+ G L E ++K+ D+ + I E++ +L ++DLK R+ K V
Sbjct: 141 ITASSGINGVDLFDNLEEEKDLNKVTDLISSYALIKQEDKQDILQTLDLKKRIEKLIFYV 200
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
++ ++ ++I KV+ +L K Q+E+ LR+QM+ I+EELG++DD++ ++ E+ +
Sbjct: 201 KEEIEVAKIEKRIGTKVKKKLDKGQREYYLREQMKVIQEELGEDDDNKKAIIEFEKLINE 260
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
+P+ + + Q E+ +LK P +R YLE + D+PW + +E+ L++K A++
Sbjct: 261 KKLPNQVKEKAQYEISKLKASSPYSQDGGVTRTYLENLLDMPWGEFTEDT-LNIKDARKV 319
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DHYGL VK RI+EYLAV+++ RGP+LC VGPPGVGKTS+A S+A++L RKF+R
Sbjct: 320 LDKDHYGLKDVKDRILEYLAVKQISNSLRGPILCLVGPPGVGKTSIAKSVATSLNRKFVR 379
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV+DEADIRGHRRTY+G++PGR++ GLK NPV LLDEIDK G D +G+PA A
Sbjct: 380 MSLGGVRDEADIRGHRRTYVGAIPGRIVTGLKEAKSMNPVFLLDEIDKLGMDFKGNPADA 439
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEV D EQNKTF DHYL V DLS+V+F+ TAN IP PLLDRME+IE+ GYT EEK
Sbjct: 440 LLEVFDNEQNKTFRDHYLEVDVDLSEVMFITTANSLDGIPRPLLDRMELIEVSGYTYEEK 499
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
RIA ++L+P+VL +HG+ ++ + I ++ +KL+I YTRE+GVRNL+R +A + R
Sbjct: 500 FRIAKKYLVPKVLKEHGVDNKIITISDSALKLIIDSYTRESGVRNLQRQIANVIRKGIKD 559
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
+ E++++ S+K
Sbjct: 560 IIEKDKKNLNISTK---------------------------------------------- 573
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
++EK LGP F E ++ G+ G+ WT +GG+ VE M GKG L LTGQ
Sbjct: 574 ---LVEKYLGPKIF-SYEEIDKEDKVGVVTGMAWTAYGGDTLPVEVMVMDGKGRLELTGQ 629
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESA+ A ++VRA +L + E +DIHIH P GAVPKDGPSAGVT+
Sbjct: 630 LGDVMKESARAAYSYVRAHMKELGIKDE----FYSKKDIHIHAPEGAVPKDGPSAGVTMT 685
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TALVS + K+V+ + AMTGE+TL G VL +GG+K+K LAA R GI VI+P+ N KD++
Sbjct: 686 TALVSALTGKKVKHNVAMTGEITLTGKVLAIGGLKEKCLAARRVGIDTVIVPKENEKDVI 745
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEG 818
++P V SL IILA +++DVLE A G
Sbjct: 746 KLPKIVKDSLNIILADKIDDVLENALVG 773
>gi|110802868|ref|YP_698701.1| ATP-dependent protease La [Clostridium perfringens SM101]
gi|110683369|gb|ABG86739.1| ATP-dependent protease La [Clostridium perfringens SM101]
Length = 776
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 317/748 (42%), Positives = 458/748 (61%), Gaps = 62/748 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R + E + A I +E+ E D + ALSR+ K E +
Sbjct: 87 VLVEGIERAKMDEFFDKEELLEASIEKIEIDN------EIDHELEALSRKLKDDFFEFLD 140
Query: 132 VLEQKQKTG-GRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+ G L E ++K+ D+ + I E++ +L ++DLK R+ K V
Sbjct: 141 ITANSGINGVDLFDNLEEEKDLNKVTDLISSYALIKQEDKQDILQTLDLKQRIEKLIFYV 200
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
+ ++ ++ ++I KV+ +L K Q+E+ LR+QM+ I+EELG++DD++ ++ E+ +
Sbjct: 201 KQEIEVAKIEKRIGTKVKKKLDKGQREYYLREQMKVIQEELGEDDDNKKAIIEFEKLINE 260
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
+P+ + + Q E+ +LK P +R YLE + D+PW + +E+ L++K A++
Sbjct: 261 KKLPNQVKEKAQYEISKLKASSPYSQDGGVTRTYLENLLDMPWGEFTEDT-LNIKDARKV 319
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DH GL VK RI+EYLAV+++ RGP+LC VGPPGVGKTS+A S+A++L RKF+R
Sbjct: 320 LDKDHCGLKDVKDRILEYLAVKQISNSLRGPILCLVGPPGVGKTSIAKSVATSLNRKFVR 379
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV+DEADIRGHRRTY+G++PGR++ GLK NPV LLDEIDK G D +G+PA A
Sbjct: 380 MSLGGVRDEADIRGHRRTYVGAIPGRIVTGLKEAKSMNPVFLLDEIDKLGMDFKGNPADA 439
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEV D EQNKTF DHYL V DLS+V+F+ TAN IP PLLDRME+IE+ GYT EEK
Sbjct: 440 LLEVFDNEQNKTFRDHYLEVDVDLSEVMFITTANSLDGIPRPLLDRMELIEVSGYTYEEK 499
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
RIA ++L+P+VL +HG+ ++ + I ++ +KL+I YTRE+GVRNL+R +A + R
Sbjct: 500 FRIAKKYLVPKVLKEHGVDNKIITISDSSLKLIIDSYTRESGVRNLQRQIANVIRKGIKD 559
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
+ E++++ S+K
Sbjct: 560 IIEKDKKNLNISTK---------------------------------------------- 573
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
++EK LGP F E ++ G+ G+ WT++GG+ VE M GKG L LTGQ
Sbjct: 574 ---LVEKYLGPKIF-SYEEIDKEDKVGVVTGMAWTSYGGDTLPVEVMVMDGKGRLELTGQ 629
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESA+ A ++VRA +L + E +DIHIH P GAVPKDGPSAGVT+
Sbjct: 630 LGDVMKESARAAYSYVRAHMKELGIKDE----FYSKKDIHIHAPEGAVPKDGPSAGVTMT 685
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TALVS + K+V+ + AMTGE+TL G VL +GG+K+K LAA R GI VI+P+ N KD++
Sbjct: 686 TALVSALTGKKVKHNVAMTGEITLTGKVLAIGGLKEKCLAARRVGIDTVIVPKENEKDVI 745
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEG 818
++P V SL IILA +++DVLE A G
Sbjct: 746 KLPKTVKDSLNIILADKIDDVLENALVG 773
>gi|338811975|ref|ZP_08624174.1| ATP-dependent protease La [Acetonema longum DSM 6540]
gi|337275944|gb|EGO64382.1| ATP-dependent protease La [Acetonema longum DSM 6540]
Length = 754
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/764 (41%), Positives = 469/764 (61%), Gaps = 81/764 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVE--------QDPDF 115
P G T V++EGL R + + Y+T + E + + ++E Q +
Sbjct: 60 PGG--TIHVLVEGLRRAEIIAYNEFDPYFTVEVKEYEEIQTKTPEIEALIRTTIHQFEQW 117
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ LS++ + + +E+ GR L+D+ + + E++ ++L
Sbjct: 118 VKLSKKIPPETLVSVVTVEEP----GR------------LSDLIASHLSLKIEDKQMLLA 161
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
++ +K RL +++ R L+ + + +KI +V Q+ K+QKE+ LR+QM+AI++ELGD D
Sbjct: 162 AIPVKERLEVLCDILGRELEILELEKKINVRVRKQMEKTQKEYYLREQMKAIQKELGDKD 221
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D + ++++ +P + + +QKE+ RL+K P + R YL+ + LPW K
Sbjct: 222 DRMAEAEEYRQRLKEQDLPKEVAEKIQKEIERLEKTPPMVAESSVIRTYLDWLLSLPWTK 281
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+E+ LD+ A++ L+ DHYGL +VK+RI+EYL++RKL +G +LC VGPPGVGKTS
Sbjct: 282 ETED-RLDINVAEKILEEDHYGLEKVKERILEYLSIRKLNEHMKGAILCLVGPPGVGKTS 340
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
LA SIA ++ RKF+R+SLGGV+DEA+IRGHRRTY+G++PGR+I G++ G NPV LLDE
Sbjct: 341 LARSIARSMERKFVRVSLGGVRDEAEIRGHRRTYVGALPGRIIQGMRTAGSKNPVFLLDE 400
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
+DK +D RGDP++ALLEVLDPEQN TF+DHY+ +PFDLS+V++V TAN IP PLLD
Sbjct: 401 VDKMSADFRGDPSAALLEVLDPEQNNTFSDHYVELPFDLSRVLWVITANAMHNIPRPLLD 460
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+I + GYT EEK++IA+R+LIP+ L +HGL + L E ++ VI+ YTREAGVR+
Sbjct: 461 RMEIITIAGYTEEEKIQIALRYLIPKQLKEHGLTEKQLMFSEGTLQKVIRDYTREAGVRS 520
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LERN+A L R AA ++ + ++ +++++H
Sbjct: 521 LERNIAGLCRKAARRIVQHKRTAVKLTAQNLH---------------------------- 552
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
T+ LG P++ + E G++ GL WT GG+V VE
Sbjct: 553 -----TY----------------LGAPKYR-KTPTELNHQVGLATGLAWTEVGGDVLSVE 590
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ M GKG+L LTGQLGDV++ESAQ T++R R +L + ED + DIH+H P
Sbjct: 591 VSVMPGKGQLTLTGQLGDVMRESAQAGFTYIRTRMRELG-IQED---FHEKTDIHVHLPE 646
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA+PKDGPSAG+T+ TA+ S + + VR + AMTGE+TLRG VLPVGG+K+K+LAAHR G
Sbjct: 647 GAIPKDGPSAGITMATAMASALTGRPVRTEIAMTGEITLRGRVLPVGGIKEKVLAAHRIG 706
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
IK+VI+P+ N +D E+P V +LE I + M++VL A G
Sbjct: 707 IKKVIMPKENKRDTDEIPVNVKRALEFIFVEHMDEVLRAALIEG 750
>gi|289577856|ref|YP_003476483.1| ATP-dependent protease La [Thermoanaerobacter italicus Ab9]
gi|289527569|gb|ADD01921.1| ATP-dependent protease La [Thermoanaerobacter italicus Ab9]
Length = 778
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 326/753 (43%), Positives = 464/753 (61%), Gaps = 68/753 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R +Q+++ ++ + E K ++E+ P+ AL R + E ++
Sbjct: 87 VLVEGISRAEIQQITRDDEFFEVEVIEKEEQK----EIEKTPELEALMRSVTSAFKEYVN 142
Query: 132 VLEQKQKTGGRTKVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATE 188
+ +G + L + I +LAD+ A ++ + +L+ D+ RL E
Sbjct: 143 M-----TSGLPIESLYSVLNIEEPGRLADMIAAHISLNTNQSQQLLECFDVNKRLETLLE 197
Query: 189 LVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKM 248
+ + L+ + + ++I KV ++ K QKE+ LR+Q++AIK ELG+ D+ + ++ E+K+
Sbjct: 198 FLMKELEILSIEKEINAKVRSRIDKLQKEYYLREQLKAIKAELGETDEIDQEVEEYEKKI 257
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAK 308
+ +P + K ++EL+RL KM P + R YL+ I DLPW +E+I LDLK A+
Sbjct: 258 EEKDLPEEVRKKAKEELKRLSKMAPGSAEASVVRTYLDWILDLPWNYETEDI-LDLKRAQ 316
Query: 309 ERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF 368
+ LD DHYGL +VK+RIIE+LAVR + P+LC VGPPGVGKTSL SIA A+ RKF
Sbjct: 317 KILDEDHYGLKKVKERIIEFLAVRSFYNKIKSPILCLVGPPGVGKTSLGRSIARAMNRKF 376
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
+R+SLGGV+DEA+IRGHRRTY+G++PG +I+ +K G NPV LLDEIDK SD RGDPA
Sbjct: 377 VRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIKIAGSKNPVFLLDEIDKMSSDFRGDPA 436
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
SA+LEVLDPEQN TF DHYL++PFDLSKV+F+ TAN IP PLLDRME+I + GYT E
Sbjct: 437 SAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTTDTIPAPLLDRMEIIYVSGYTEE 496
Query: 489 EKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA 548
EKL IA +LIPR+L +HG+ + I E+ + +I YTREAGVR LE+NL+ + R A
Sbjct: 497 EKLHIAKDYLIPRILKEHGVPDNKIIIQESAIYGIISEYTREAGVRGLEKNLSQIVRKAI 556
Query: 549 VKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPL 608
K+ E+ +VI +G+
Sbjct: 557 KKIVEENA------------------------------QVIKVGKRN------------- 573
Query: 609 VVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLT 668
L+ LG P + +A ++ GI GL WT GGE+ VEA+ M G G+L+LT
Sbjct: 574 ------LQSYLGKPIYRTDKANQK-DEIGIVFGLAWTRVGGEILTVEASIMPGSGKLNLT 626
Query: 669 GQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVT 728
GQLGDV+KESAQ L+++RA A L + + + DIHIH P GA+PKDGPSAG+T
Sbjct: 627 GQLGDVMKESAQAGLSYIRANADKLNI----DKDFYKNVDIHIHVPEGAIPKDGPSAGIT 682
Query: 729 LVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKD 788
+VTA+VS + VR D AMTGE+TL G +LP+GGVK+K+LAAHR GI +VILP+ N +D
Sbjct: 683 MVTAMVSALKKVPVRKDVAMTGEVTLTGKILPIGGVKEKVLAAHRAGITKVILPQENKRD 742
Query: 789 LVEVPAAVLASLEIILAKRMEDVLEQAF-EGGC 820
L E+P +V LE +++++VL+ A + GC
Sbjct: 743 LDEIPQSVKRKLEFKFVEKIDEVLDFALVKEGC 775
>gi|392413250|ref|YP_006449857.1| ATP-dependent proteinase [Desulfomonile tiedjei DSM 6799]
gi|390626386|gb|AFM27593.1| ATP-dependent proteinase [Desulfomonile tiedjei DSM 6799]
Length = 832
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 332/764 (43%), Positives = 467/764 (61%), Gaps = 85/764 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P GRV +V +GL + + + +L+ K+ +E++++ P A+S +
Sbjct: 104 PDGRVKILV--QGLAKARIDRF----------VENLDFFKVVIEKIQEPP---AVSITIE 148
Query: 124 ATAMELISVLEQKQK--------TGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
A+ + SV E +K + +L +LAD+ ++ ++ +E +L+
Sbjct: 149 VEAL-MRSVKENSEKILQLRGIISPDAVAILDSIDDPGRLADLVASNLKLRVDESQAILE 207
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+D RL+K EL+ + L+ + KI + + ++ K+ +E+ LR+Q++AI+ ELG+ D
Sbjct: 208 VIDPIERLTKVNELLSKELELSAMQAKIQTQAKEEMGKTHREYFLREQLKAIQGELGEID 267
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
+ ++ +K+ A +P + K +K+L RL +M P + R YL+ + +LPW K
Sbjct: 268 EKTKEIEEFRQKIAKARLPKDTEKEAEKQLSRLGQMHPDAAEASIIRTYLDWMVELPWSK 327
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
++ + LD+K AK LD DHY L +VK RI+EYL VRKL + +GP+LCFVGPPGVGKTS
Sbjct: 328 STRD-KLDIKNAKVILDEDHYDLEKVKDRILEYLGVRKLNKNMKGPILCFVGPPGVGKTS 386
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA ALGRKF RISLGGV+DEA+IRGHRRTYIG++PGR+I GLK G NPV +LDE
Sbjct: 387 LGKSIARALGRKFTRISLGGVRDEAEIRGHRRTYIGALPGRIIQGLKTAGSNNPVFMLDE 446
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK G+D RGDP++ALLEVLDPEQN F+DHYLNVPFDLSKV+F+ TAN A PI L D
Sbjct: 447 IDKVGADFRGDPSAALLEVLDPEQNHAFSDHYLNVPFDLSKVMFITTANLADPIIAALKD 506
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+IEL GY EEKL+I ++LIPR + ++G+ E I + + +I +YTREAG+RN
Sbjct: 507 RMEIIELSGYIDEEKLKITRQYLIPRQIKENGIRKEDFDITDEAILGIINQYTREAGLRN 566
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER +AAL R A +AE E++ ++K+++R
Sbjct: 567 LEREIAALCRKIARMIAEGEKKIPRITAKNLNRF-------------------------- 600
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRF-DDREAAERVAAPGISVGLVWTNFGGEVQFV 654
LG PRF DRE +R G++ GL WT +GG+V +
Sbjct: 601 -----------------------LGVPRFLPDRE--KRSEEVGVATGLAWTPYGGDVLHI 635
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGM--NLLQGRDIHIH 712
EAT M G+G L LTGQLGDV+KES Q A+++ R+RA A+ GM +DIH+H
Sbjct: 636 EATLMEGRGNLSLTGQLGDVMKESGQAAMSYFRSRA------AKFGMKEKFYFSKDIHVH 689
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
PAGA+PKDGPSAGVT+ TAL+S F+ VR+D AMTGE+TLRG VLP+GG+++K LAA
Sbjct: 690 VPAGAIPKDGPSAGVTMATALISAFTGIPVRSDVAMTGEITLRGRVLPIGGLREKSLAAL 749
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
R I VI PE+N KDL E+P + L K M++VL+ A
Sbjct: 750 RSRIYTVIAPEQNEKDLEEIPRHIRRRLNFKFVKHMDEVLKIAL 793
>gi|374374927|ref|ZP_09632585.1| anti-sigma H sporulation factor, LonB [Niabella soli DSM 19437]
gi|373231767|gb|EHP51562.1| anti-sigma H sporulation factor, LonB [Niabella soli DSM 19437]
Length = 799
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/769 (40%), Positives = 477/769 (62%), Gaps = 70/769 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ + L ++ P G T V+++G +F+++ ++T Y+ A I +I +
Sbjct: 98 GTVAKVIKL---IKMPDGGTT--VIIQGRSKFAIESITTSDPYFKATIK-----RIVDAE 147
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FEISF 167
D DF A K A +I +Q ++L+ + FV+S +
Sbjct: 148 APVDADFEAHIANIKDLATNII---QQSPNIPSEASIILKNIEKPSFLIHFVSSNLNTTM 204
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
EE+ +L+ D++ R + +L+ + LQ + + K+T K +L K Q+E+ L+QQ+++I
Sbjct: 205 EEKQRLLEITDIRERAANLMQLLQKELQFVELKNKVTNKTRTELDKQQREYFLQQQLKSI 264
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
KEELG D + ++ +++K ++ P + +K++ +L++M P P Y+ +++
Sbjct: 265 KEELG-GDTNSQEIKEMQKKAETKKWPETAKEAFKKDIEKLERMHPSTPDYSVIYNHVDF 323
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
+ DLPWE+ +E+ DLK AK+ LD DHYG+ R+K+RI+EYLAV KLK D + P+LCF+G
Sbjct: 324 LLDLPWEEYTED-HYDLKNAKQTLDHDHYGMARIKERILEYLAVLKLKGDMKSPILCFLG 382
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPG+GKTSL SIA ALGRK+IR+SLGG+ DE++IRGHR+TYIG+MPGR++ L++V
Sbjct: 383 PPGIGKTSLGKSIAGALGRKYIRLSLGGLHDESEIRGHRKTYIGAMPGRILQSLRKVKSS 442
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV++LDEIDK G+D+RGDP+SALLEVLDPEQN TF D+YL + +DLSKV+F+ATAN Q
Sbjct: 443 NPVIVLDEIDKVGNDMRGDPSSALLEVLDPEQNNTFYDNYLELEYDLSKVLFIATANNIQ 502
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
I P L DR+E+I+L GY EEK+ IA RHLIP+ + HGL ++ + ++ +I Y
Sbjct: 503 TIQPALRDRLEIIDLSGYAIEEKIEIAKRHLIPKQKELHGLAKNNIRFSDKVLAQLIADY 562
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TRE+GVR L+R LA++ R A KVA +E PL
Sbjct: 563 TRESGVRELDRVLASVMRNQAKKVAMEE----------------PL-------------- 592
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
SPL + LE++LG ++++ + + V PG++VGL WT
Sbjct: 593 -----------------KSPLTAE--ALEEILGKAKYNN-DLYKTVNLPGVAVGLAWTYV 632
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGR 707
GG++ F+E++ GKGELHLTG LG+V+KESA ALT++++ A ++ +L Q +
Sbjct: 633 GGDILFIESSLSDGKGELHLTGNLGNVMKESATTALTYLKSNAEKYKI----DPSLFQKK 688
Query: 708 DIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDK 767
++HIH P GA PKDGPSAG+T++T++ S ++V+ AMTGE+TLRG VLPVGG+K+K
Sbjct: 689 NLHIHVPEGATPKDGPSAGITMMTSIASALLGRKVKPYLAMTGEITLRGQVLPVGGIKEK 748
Query: 768 ILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
ILAA R G+K +I+ +N KD+ EV A + L+ +ME+VL+ A
Sbjct: 749 ILAAKRAGLKEIIVCAQNSKDVSEVEAGFIKGLKFHYVNKMEEVLQIAL 797
>gi|323140766|ref|ZP_08075685.1| endopeptidase La [Phascolarctobacterium succinatutens YIT 12067]
gi|322414784|gb|EFY05584.1| endopeptidase La [Phascolarctobacterium succinatutens YIT 12067]
Length = 777
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 308/666 (46%), Positives = 428/666 (64%), Gaps = 55/666 (8%)
Query: 152 IHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQL 211
+ K+ DI V +S E+ +L+ LK+RL K E++ R + VA+ I+++V Q+
Sbjct: 163 LSKVPDIIVGYLPLSLTEKEELLEMAPLKLRLRKLYEILVREQEIADVAKNISEQVHQQV 222
Query: 212 SKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKM 271
++QKE+ LR+Q++AI +ELG+N+D + ++ + +M MP N+ + + KEL RL KM
Sbjct: 223 EQNQKEYYLREQIKAISKELGENEDVQAEIADYKEQMSKLEMPQNVAEKINKELGRLAKM 282
Query: 272 QPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAV 331
P R Y++ + LPW K +++ + DL A+ LD+D YGL +VK+RI+EYLAV
Sbjct: 283 PSMTPEGAVIRTYIDSLLALPWGKFTKD-NFDLDKAQAVLDNDRYGLKKVKERILEYLAV 341
Query: 332 RKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIG 391
R L RGP+LC VGPPGVGKTSLASSIA A+ RKF R+SLGGV+DEA+IRGHRRTYIG
Sbjct: 342 RALSKSTRGPILCLVGPPGVGKTSLASSIAKAIKRKFTRVSLGGVRDEAEIRGHRRTYIG 401
Query: 392 SMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP 451
SMPGR+I G++ G NPV LLDEIDK SD RGDPASALLEVLDPEQN +F+DH++ P
Sbjct: 402 SMPGRIIHGMQACGCMNPVFLLDEIDKMASDFRGDPASALLEVLDPEQNNSFSDHFIEFP 461
Query: 452 FDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSE 511
FDLS V ++ TAN IPP LLDR+E+I+L YT EEK++IA HL+P+ L +GL
Sbjct: 462 FDLSHVFWIVTANAVDTIPPALLDRLEIIQLSSYTDEEKVKIAQLHLLPKELKLNGLEKY 521
Query: 512 FLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGS 571
+ + E ++ VI YTREAGVRNLER LA + R A K+ + + + A + K++ +
Sbjct: 522 KVSVSEKAIRRVIHDYTREAGVRNLERKLAGICRKVAFKIVKGKSKGAQVTEKNLEKYLG 581
Query: 572 PLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAE 631
P++ + D+ L+ +G
Sbjct: 582 PVI---------------------------------YLDDDISLKSSVG----------- 597
Query: 632 RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
++ GL WT+ GGE+ VE A +GKG L LTGQLGDV+KESAQ T++R+RA
Sbjct: 598 ------VANGLAWTSVGGELLKVEVLAFKGKGNLTLTGQLGDVMKESAQAGYTYIRSRAE 651
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
L + A G + DIHIH P GAVPKDGPSAGVT+VTA+VS + K+V+ AMTGE
Sbjct: 652 ALGIAANFGETM----DIHIHLPEGAVPKDGPSAGVTMVTAMVSALTGKKVKGKLAMTGE 707
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
++L G V PVGG+K+K+LAA+RYG+K V+LP+RN++DL E+P + ++ I + ++DV
Sbjct: 708 ISLSGKVWPVGGIKEKMLAAYRYGVKTVLLPKRNMQDLDELPENIRKEMQFIPVEHLDDV 767
Query: 812 LEQAFE 817
L+ A E
Sbjct: 768 LKLALE 773
>gi|367468429|ref|ZP_09468295.1| ATP-dependent protease La [Patulibacter sp. I11]
gi|365816496|gb|EHN11528.1| ATP-dependent protease La [Patulibacter sp. I11]
Length = 828
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 314/663 (47%), Positives = 429/663 (64%), Gaps = 35/663 (5%)
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
L+ + S + E+ +L+ DL RL E++ R L+ I + +I +V+ +L K
Sbjct: 185 LSHLIAGSLRLGSSEKQRLLEETDLGTRLRHLVEILARELEVISIGSQIQSQVQSELEKG 244
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
Q+E++LRQQ++AI+EELG++D E ++ L ++ + +P + K +ELRRL+ +
Sbjct: 245 QREYVLRQQLKAIQEELGESDPQEAEVGELREQLDALDLPEQVAKQADRELRRLESIPQA 304
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
+ R YLE I LPW + + DLDL A+ LD+DH+GL +VK+RI+E+LAVR+L
Sbjct: 305 SAEHGVIRTYLEWIVSLPWSDRTID-DLDLVHARSVLDADHFGLDKVKERILEFLAVRQL 363
Query: 335 KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
KPDARG +LCFVGPPGVGKTSL SIA A+GR F RIS GGV+DEA+IRGHRRTYIG+MP
Sbjct: 364 KPDARGSILCFVGPPGVGKTSLGRSIARAMGRNFERISAGGVRDEAEIRGHRRTYIGAMP 423
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
G +I L+ G NP++++DEIDK GSD RGDP+SA+LEVLDPEQN +F DHYL+VPFDL
Sbjct: 424 GTIIRALRDAGSNNPLLMIDEIDKMGSDYRGDPSSAMLEVLDPEQNSSFRDHYLDVPFDL 483
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
S+V+F+ TAN +P PL DRMEVI+L GYT +EKL IA R+L+PR LD+HGL +L
Sbjct: 484 SRVMFITTANTLDTVPGPLRDRMEVIQLAGYTAQEKLEIAKRYLVPRQLDRHGLRRSWLT 543
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLL 574
+ ++ +I YTREAGVRNLER + + R A ++ E +Q P+S +
Sbjct: 544 FGDPALRALIDDYTREAGVRNLEREIGRVVRKIAREIVEADQG---PASSNG-------- 592
Query: 575 DNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVA 634
++T + + V + +E++LG P F +E +R +
Sbjct: 593 ------------------KATKKKGAKKAVQRRTTVSRSRVEELLGRPPFH-QELRKRTS 633
Query: 635 APGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQ 694
PG++ GL WT GG+V FVEA AM GKG L TGQLGDV+ ES + ALTWVR L
Sbjct: 634 RPGVATGLAWTPVGGDVLFVEAAAMPGKGRLTTTGQLGDVMTESVRAALTWVRGH---LD 690
Query: 695 LVA-EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
LVA E + D+H+H PAGA PKDGPSAG+T+ TA+ SL S + VRAD AMTGE+T
Sbjct: 691 LVAPELPPDWFAEHDLHVHVPAGATPKDGPSAGITIATAISSLLSGREVRADVAMTGEIT 750
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
L G VLP+GG+K+K LAA R G+ RVI P N +D +VP A+ + + ++E+VLE
Sbjct: 751 LTGEVLPIGGLKEKALAAQRNGVARVIAPRENERDADDVPEALRSRIAFTWVDQVEEVLE 810
Query: 814 QAF 816
A
Sbjct: 811 VAL 813
>gi|344996649|ref|YP_004798992.1| anti-sigma H sporulation factor LonB [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964868|gb|AEM74015.1| anti-sigma H sporulation factor, LonB [Caldicellulosiruptor
lactoaceticus 6A]
Length = 775
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 327/745 (43%), Positives = 455/745 (61%), Gaps = 60/745 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+++EGL R V + + Y+ + E K +++ DP+ AL R A E +
Sbjct: 89 ILVEGLYRARVIKYLSTEPYFLVEV---EEYKENESKLKDDPELEALIRNV-VGAFEEFA 144
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
L K V P +LAD+ A+ + E++ ++L+ VDLK RL+K E++
Sbjct: 145 RLTNKIPPDAILSVTTIQSP-DQLADVIAANVVVKLEDKQLLLEKVDLKERLAKLYEMIL 203
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ + I + KI KV+ Q+ K+QKE+ LR+Q++AI+ ELG+ D + +++
Sbjct: 204 KEKEIIEIERKIAIKVKKQIDKTQKEYYLREQLKAIQSELGEKDSLFSEAEEYREQVKKL 263
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
G+ + V KE+ RL+K+ P P R YL+ I DLPW S+E +D+ K+ L
Sbjct: 264 GLSQESLQKVFKEIDRLEKLPPNSPEVGVIRTYLDWIVDLPWNVRSDE-KIDINVVKKVL 322
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHYGL +VK+RI+EY+AVRKLK D +GP+LC VGPPGVGKTS+A SIA AL R ++RI
Sbjct: 323 DEDHYGLTKVKERILEYIAVRKLKNDMKGPILCLVGPPGVGKTSIAKSIARALNRNYVRI 382
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGG++DEA+IRGHR+TY+G+MPGR+I +++ NP++LLDEIDK D RGDPASAL
Sbjct: 383 SLGGLRDEAEIRGHRKTYVGAMPGRIIYAIRQAKTKNPLILLDEIDKMSHDFRGDPASAL 442
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLD EQN F DHY+ +PFDLS+V+F+ATAN + IP PLLDR+EVIE+ GYT EEKL
Sbjct: 443 LEVLDSEQNFAFRDHYIEIPFDLSEVMFIATANTLETIPRPLLDRLEVIEITGYTEEEKL 502
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
IA R+L+P+ ++Q+GL L+ +K +I YTRE+GVRNLER +A L R A ++
Sbjct: 503 EIARRYLLPKQMEQNGLKKSQLRCDLEAIKDIIAFYTRESGVRNLEREIARLCRRVAKEI 562
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
E+ ++ + K+
Sbjct: 563 LEENKKMVRVTQKN---------------------------------------------- 576
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
LEK LG ++ E E+ GI GL WT FGGE +VEA M G G+L LTGQL
Sbjct: 577 ---LEKYLGVRKYRRDELIEQDRV-GIVTGLAWTPFGGETLYVEALVMPGSGKLELTGQL 632
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDV+KESA+ A++ +R+RA +L + N + DIHIH P GA+PKDGPSAGVT+ T
Sbjct: 633 GDVMKESAKAAVSIIRSRAKELGI----DQNFYKECDIHIHVPEGAIPKDGPSAGVTMAT 688
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
A+VS S+++VR D AMTGE+TL G VLP+GGVK+K+LAA R GIK VILP N KD+ E
Sbjct: 689 AMVSALSQRKVRYDIAMTGEITLSGRVLPIGGVKEKVLAAKRVGIKNVILPFGNKKDVDE 748
Query: 792 VPAAVLASLEIILAKRMEDVLEQAF 816
+ V + I K +++V + A
Sbjct: 749 LEDYVKKDMNFIFVKTIDEVFDIAI 773
>gi|404491561|ref|YP_006715667.1| ATP-dependent Lon protease (La) [Pelobacter carbinolicus DSM 2380]
gi|77543728|gb|ABA87290.1| ATP-dependent Lon protease (La) [Pelobacter carbinolicus DSM 2380]
Length = 780
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 337/763 (44%), Positives = 459/763 (60%), Gaps = 69/763 (9%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R V+ P GR +V +GL + V + Y+ ++E +E + AL
Sbjct: 82 RSVKLPDGRSKILV--QGLGKAHVVHYLSSVPYFAVTTEAVEDLVVESSMQTE-----AL 134
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDS 176
R + EL + + V +E + P H LAD+ ++ + +L+
Sbjct: 135 MRSVREQLTELHGM---GRSFSNEVLVAMENIEDPGH-LADVVASNLGLKVAVVQPLLEE 190
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
D RL K EL+ R + I V ++I + ++ SQ+E+ LR+Q+RAI+ ELG+ D
Sbjct: 191 NDPIRRLHKVQELLLRETELINVQQRIQTQAREEMGSSQREYFLREQLRAIQSELGEADA 250
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+DL+ L ++ A +P+++ K K+LRRL+ M + Y R YLE +ADLPW+K+
Sbjct: 251 KAEDLLELRAQIDKAKLPADVGKEAHKQLRRLETMPVEAAEYAMLRTYLEWLADLPWQKS 310
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
+ + +DL AA+ LD DHY L +VK+RI+E+LAV KLK GPVLCFVGPPGVGKTSL
Sbjct: 311 TRD-SIDLAAARAILDEDHYDLDKVKERILEFLAVCKLKKKLNGPVLCFVGPPGVGKTSL 369
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
SIA ALGRKF+R+SLGG++DEA+IRGHRRTY+G++PGR++ +K+ G NPV +LDE+
Sbjct: 370 GKSIARALGRKFVRVSLGGLRDEAEIRGHRRTYVGALPGRILQSMKQAGSNNPVFMLDEL 429
Query: 417 DKT-GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
DK G+D RGDP++ALLE+LDPEQN F+DHY+N+PFDLSKV+FVATAN +P L D
Sbjct: 430 DKVGGADFRGDPSAALLELLDPEQNHAFSDHYINLPFDLSKVMFVATANVLDSVPSALRD 489
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
R+EVI L GY+ E+KL IA R+LIPR L+ +GL L I + VI YT EAG+RN
Sbjct: 490 RLEVIRLAGYSTEQKLAIARRYLIPRQLEANGLQESDLAISRNALLKVIGEYTAEAGLRN 549
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L + R A + AE
Sbjct: 550 LERELGGICRKVARRRAE------------------------------------------ 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
N R P+ V L LGP R+ D + E G+ GL WT GG++ VE
Sbjct: 568 ----NDLR---PVRVTSGTLASYLGPSRYLDEDKLEEHEV-GVVTGLAWTEVGGQILHVE 619
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
A+ M G G+LHLTGQLGDV+KESAQ AL++ RA A + + + DIHIH PA
Sbjct: 620 ASIMPGSGQLHLTGQLGDVMKESAQAALSYARAHAGQWGI----DPDFYKSLDIHIHVPA 675
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA+PKDGPSAGVT++TALVS+ S++ V + AMTGE+TLRG VLP+GGVK+K+LAA R G
Sbjct: 676 GAIPKDGPSAGVTIMTALVSILSQRPVNREVAMTGEITLRGQVLPIGGVKEKLLAAVRAG 735
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
++ V+LP RN KDL +VPA + L ++ A R+EDVL A EG
Sbjct: 736 MQTVVLPRRNQKDLADVPAGLRRRLALVFADRVEDVLAVALEG 778
>gi|345859932|ref|ZP_08812263.1| ATP-dependent protease La [Desulfosporosinus sp. OT]
gi|344326990|gb|EGW38437.1| ATP-dependent protease La [Desulfosporosinus sp. OT]
Length = 810
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 339/760 (44%), Positives = 458/760 (60%), Gaps = 78/760 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EG+ R V E Y+ R+ K AL+ + +
Sbjct: 80 PGG--TMRVLVEGISRGRVLEFLEEDKYFKVRVEEFSEEKR------------ALTTELE 125
Query: 124 ATAMELISVLEQKQKTGGRTKV-----LLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
+ E+ K R V +L +LADI + + ++ +L+++
Sbjct: 126 TLIRGMTHQFEEYAKLSKRVPVETLGTVLAVEEPGQLADIVASHLNLKVPDKQTILEAMV 185
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
++VRL + TEL+ R ++ + + +I Q+V Q+ K+QKE+ LR+QM+AI++ELGD D+
Sbjct: 186 IEVRLERLTELIMREIEIMELERRIGQRVRKQMDKAQKEYYLREQMKAIQKELGDKDERL 245
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+ K+ A P + + KE+ RL+KM P T R YL+ I LPW KAS+
Sbjct: 246 VEAEEYREKVAKAKCPKEVEQKALKEIERLEKMPPSSAEGTVVRTYLDWILALPWGKASK 305
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ +DL+ A++ L+ DHYGL ++K+RI+E+LA+RKL P + P+LC VGPPGVGKTSLA
Sbjct: 306 D-KIDLQKAEDILNEDHYGLEKIKERILEFLAIRKLTPKMKSPILCLVGPPGVGKTSLAK 364
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA +L RKF+R+SLGG++DEA+IRGHRRTYIG++PGR+I G++ G N V LLDEIDK
Sbjct: 365 SIARSLDRKFVRMSLGGLRDEAEIRGHRRTYIGALPGRIIQGVRTAGTRNSVFLLDEIDK 424
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
SD RGDPASALLEVLDPEQN TF DHY+ VPFDLS+ +FV TAN IP PLLDRME
Sbjct: 425 MTSDFRGDPASALLEVLDPEQNSTFTDHYMEVPFDLSQTLFVLTANTLHTIPRPLLDRME 484
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI L GYT +EK+ IA R+L+P+ ++ HGL + + + + ++ ++Q YTRE+GVRNLER
Sbjct: 485 VITLSGYTEDEKVNIAKRYLVPKQMESHGLKPDVVTMDDEVLLKLVQGYTRESGVRNLER 544
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A L R A+ ++E E P + V LG
Sbjct: 545 EVANLCRKIAILWVKKEWE---PHALTVEDLG---------------------------- 573
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAP--GISVGLVWTNFGGEVQFVEA 656
K LG PR+ + AA+ AP G GL +T GG V VE
Sbjct: 574 ------------------KALGVPRYHFQVAAK---APEIGAVTGLAFTEVGGVVLTVEV 612
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
T + GKG L LTGQLGDV+KESAQ A T++RA A +L + ED D+HIH P G
Sbjct: 613 TPLPGKGRLTLTGQLGDVMKESAQAAWTFIRAYALELG-IEED---FYDRTDLHIHVPEG 668
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A+PKDGPSAGVT+ TA+ S S++ VRAD AMTGE+TLRG VLP+GGVK+K+LAAHR G
Sbjct: 669 AIPKDGPSAGVTMATAMASALSKRAVRADLAMTGEITLRGNVLPIGGVKEKVLAAHRAGS 728
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K V+LPE N KDL +VP V LE R+EDVL+ A
Sbjct: 729 KVVLLPEENRKDLEDVPENVRKLLEFHFVSRIEDVLKLAL 768
>gi|317154523|ref|YP_004122571.1| ATP-dependent protease La [Desulfovibrio aespoeensis Aspo-2]
gi|316944774|gb|ADU63825.1| ATP-dependent protease La [Desulfovibrio aespoeensis Aspo-2]
Length = 841
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 336/777 (43%), Positives = 464/777 (59%), Gaps = 69/777 (8%)
Query: 35 DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTA 94
D N E+ G+ R L + P GR+ V+++GL R V+ + Y+ A
Sbjct: 127 DDPNPDELYATGTVGMIMRMLKM------PDGRLK--VLVQGLARARVKRFTASDPYHIA 178
Query: 95 RISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHK 154
+ L ++ EQ+ I SR+ + L + Q + VL +
Sbjct: 179 ELEPLMEPEVGSLTSEQEA-LIRSSREQSERILSLRGISSQDIMS-----VLNNVNEPGR 232
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LAD+ ++ + E +L+ D +RL + + ++ + KI + + K+
Sbjct: 233 LADLIASNLRMKVEAAQRILECHDPIIRLELVNSQLLKEVEVASMQNKIQTMAKEGMDKA 292
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
Q++F LR+Q++AIK ELGD+ D+ +++ L++ + +GMP ++ K K+LRRL+ M +
Sbjct: 293 QRDFYLREQLKAIKRELGDDGDESEEMEELKQGVTKSGMPKDVMKECFKQLRRLETMHAE 352
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
T R YL+ + DLPW+K S + LD+K A+ L+ DHY L +VK+RI+EYL+VRKL
Sbjct: 353 SSEATVIRTYLDWMIDLPWKKLSRD-RLDIKLAETILNEDHYDLEKVKERILEYLSVRKL 411
Query: 335 KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
+GP+LCF GPPGVGKTSL SIA +LGRKF R+SLGG++DEA+IRGHRRTYIG+MP
Sbjct: 412 NTRMKGPILCFSGPPGVGKTSLGRSIARSLGRKFHRMSLGGMRDEAEIRGHRRTYIGAMP 471
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
GR+I +K+ G NPV++LDEIDK GSD RGDP+SALLEVLDPEQN +F DHYLNVPFDL
Sbjct: 472 GRIIQAIKQCGTRNPVIMLDEIDKLGSDFRGDPSSALLEVLDPEQNFSFTDHYLNVPFDL 531
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
SKV+F+ TAN IP PL DRME+I +PGYT +EK I R++IPR + ++GL L
Sbjct: 532 SKVMFICTANMLDSIPGPLRDRMEIIRIPGYTEQEKTAITRRYIIPRQIRENGLKESELA 591
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLL 574
I + +V V++ YTREAG+RN+ER + L R A + AE E+
Sbjct: 592 ISDKLVAKVVREYTREAGLRNVEREIGTLCRKMARRKAEGEK------------------ 633
Query: 575 DNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVA 634
F+IT L +LGPP F D E E
Sbjct: 634 -------------------------GPFKITP------QTLHTLLGPPHFLDDEK-ETAL 661
Query: 635 APGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQ 694
PG++VGL WT GGE+ +E T M GKG+L LTG+LGDV+KESAQ AL+ RARA +
Sbjct: 662 PPGVAVGLAWTPVGGEMLHIEVTTMPGKGQLILTGKLGDVMKESAQAALSIARARADEYG 721
Query: 695 LVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTL 754
+ + L DIHIH PAGA PKDGPSAGVTLVTAL+S + V D AMTGE++L
Sbjct: 722 IDPKFNEKL----DIHIHVPAGATPKDGPSAGVTLVTALISALTNTPVSPDVAMTGEISL 777
Query: 755 RGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
RG VLPVGG+K+KILAA G+K+V++P +N KDL E+P + + I +R+ED+
Sbjct: 778 RGRVLPVGGIKEKILAAVSRGMKKVLIPAQNKKDLAEIPDELRKRIIIKTIERVEDI 834
>gi|187250896|ref|YP_001875378.1| endopeptidase La [Elusimicrobium minutum Pei191]
gi|302425052|sp|B2KCC0.1|LON_ELUMP RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|186971056|gb|ACC98041.1| Endopeptidase La [Elusimicrobium minutum Pei191]
Length = 830
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 326/782 (41%), Positives = 468/782 (59%), Gaps = 88/782 (11%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG--------TYYTA--RISSLEMTKIEM 106
+++ ++ P G + V L+G+ R ++ L +Y A ++S E+T +
Sbjct: 86 ITQSLKMPDGSIK--VFLQGIARVKIEHLDFNNIANSWFASVFYPADEKVSGPEVTALMR 143
Query: 107 EQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEIS 166
+ +++ ++ +SR+ A+E +S Q + +LAD ++ +
Sbjct: 144 QLLDEFEEYATVSRRI---AVEGVSFFRQIEDPS-------------RLADTIASNIIVK 187
Query: 167 FEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRA 226
++ +L++V+ K RL +++ ++ I + EKI KV Q+ K+QKE+ L +QM+A
Sbjct: 188 TSDRQDVLEAVNPKDRLELLIKILANEVEIISLEEKIHSKVRAQIEKNQKEYYLNEQMKA 247
Query: 227 IKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLE 286
I++EL DD + ++ L K++ G+P N + +KEL RL KM P P T SR YL+
Sbjct: 248 IQKELSQKDDFQKEIDELRSKIKKNGLPKNAKESAEKELDRLAKMAPFSPESTVSRTYLD 307
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
+ ++PW ++ +I LDLK AKE +D+DHYGL + K+RI+EYLAV KL +GP+LCF
Sbjct: 308 WLVNMPWNSSTNDI-LDLKKAKEVMDADHYGLDKPKERILEYLAVSKLTNSLKGPILCFA 366
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTSLA SIASA+GRKF+R+SLGGV+DE++IRGHRRTYIGSMPGR+I G+ +
Sbjct: 367 GPPGVGKTSLAKSIASAVGRKFVRMSLGGVRDESEIRGHRRTYIGSMPGRIIQGISKAKS 426
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NPV LLDEIDK GSD RGDPA+ALLE+LDPEQNK F+DHYL+VPFD+SKV+F+ TAN
Sbjct: 427 NNPVFLLDEIDKMGSDWRGDPAAALLELLDPEQNKDFSDHYLDVPFDVSKVMFITTANSL 486
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
IP L DR+E+I+ GYT EK IA HLIPR + +HGL L+I VKL+++
Sbjct: 487 SSIPVTLRDRLEIIDFSGYTEYEKEAIAQNHLIPRQMKEHGLKEGSLEIGLPAVKLIMRD 546
Query: 527 YTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEM 586
Y REAGVRN ER ++ + R AA +M
Sbjct: 547 YVREAGVRNFEREISTICRKAA------------------------------------KM 570
Query: 587 EVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTN 646
V G++ + V + L LG PR+ + E GIS GL WT+
Sbjct: 571 YVENCGKT-------------VTVTKDNLHDFLGVPRYTNFTTEEN--GVGISTGLAWTS 615
Query: 647 FGGEVQFVEATAMR-GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQ 705
GGE +EA+ + GKG + LTG+LGDV+KES ALT+ R++ G++
Sbjct: 616 VGGETLSIEASEISDGKGRIMLTGKLGDVMKESVHAALTYARSKGYG------KGIDF-N 668
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
D HIHFP GAVPKDGPSAG + TAL+SL ++ V+ + AMTGE+T+ G VLP+GGVK
Sbjct: 669 KTDFHIHFPEGAVPKDGPSAGTAVTTALISLLTKNPVKKNLAMTGEVTITGRVLPIGGVK 728
Query: 766 DKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQH 825
+K +AA+R G+K ++ P N KD+ EVP + L++I K M+++++ AFE G P
Sbjct: 729 EKFMAAYREGVKTILYPHTNEKDVSEVPEVIRKQLKLIPVKHMDEIVKIAFEKGEPKSSF 788
Query: 826 SK 827
K
Sbjct: 789 KK 790
>gi|325290592|ref|YP_004266773.1| ATP-dependent proteinase [Syntrophobotulus glycolicus DSM 8271]
gi|324965993|gb|ADY56772.1| ATP-dependent proteinase [Syntrophobotulus glycolicus DSM 8271]
Length = 804
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 332/753 (44%), Positives = 459/753 (60%), Gaps = 65/753 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EG+ R V E ++ AR+ + MT + E + +L QF+
Sbjct: 79 PGG--TLRVLVEGITRGQVDEFIEEEPFFKARV--IRMTNDDNLTREIETMCRSLHHQFE 134
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
A L ++ VL P ++AD+ + + E++ +L+++++ RL
Sbjct: 135 EYAR-----LSKRISPETIGSVLAVKEP-GRMADLVASHLNLKIEDKQAVLEAMNISDRL 188
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K TEL+ R ++ + + +I +V Q+ K+QKE+ LR+QM+AI++ELGD D+ + ++
Sbjct: 189 EKITELIMREIEILELERRIGLRVRKQMEKAQKEYYLREQMKAIQKELGDKDEKQAEIEE 248
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
+ K+ + + KE+ RL KM T R YL+ I LPW K S + D
Sbjct: 249 YKEKVNKGNLTEEAREKALKEIDRLDKMPVSSSEGTVVRTYLDWILALPWNKTSRD-KAD 307
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L A+ LD DHYGL +VK+RIIE+L++RKL + P+LC VGPPGVGKTSLA SIA A
Sbjct: 308 LIRAERILDEDHYGLKKVKERIIEFLSIRKLTSKMKSPILCLVGPPGVGKTSLAKSIARA 367
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L RKF+R+SLGGV+DEA+IRGHRRTYIG++PGR+I G+++ G NPV L DEIDK SD+
Sbjct: 368 LDRKFVRMSLGGVRDEAEIRGHRRTYIGALPGRVIQGIRQAGTRNPVFLFDEIDKMTSDL 427
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDPASALLEVLDPEQN TF DHYL +PFDLSKV+F+ TAN IP PLLDRMEVI+L
Sbjct: 428 RGDPASALLEVLDPEQNNTFTDHYLELPFDLSKVLFIMTANSMDTIPRPLLDRMEVIQLS 487
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EEK+ IA+ HL+ + + HGL + I + V+ +++ YTRE+GVRN+ER +A L
Sbjct: 488 GYTEEEKVNIAVEHLVNKQMKGHGLKDNQVSIDPSAVRKIVRGYTRESGVRNMERQIANL 547
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AVKV + E + +DV +L
Sbjct: 548 LRKVAVKVVKNEWKPQTIMPEDVEKL---------------------------------- 573
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
LG RF + AA + G + GL +T GGEV +E T + GKG
Sbjct: 574 ---------------LGASRFQHQAAAHKPEI-GAATGLAYTEVGGEVLMIEVTPLVGKG 617
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
L LTG+LGD++KESAQ T+VR+ A++L + +D + + D+HIH P GAVPKDGP
Sbjct: 618 VLTLTGKLGDIMKESAQAGWTFVRSHASELG-IRDDFYDKI---DLHIHVPEGAVPKDGP 673
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TA+ S +++ VR D AMTGE+TLRG VLP+GG+K+K LAAHR G+K+VI+P+
Sbjct: 674 SAGITMATAMASALAKRAVRQDVAMTGEITLRGNVLPIGGLKEKALAAHRAGLKKVIVPK 733
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N KDL E+P V LE IL +RME+VL A
Sbjct: 734 DNRKDLEEIPQEVRKELEFILVERMEEVLNVAL 766
>gi|344940003|ref|ZP_08779291.1| anti-sigma H sporulation factor, LonB [Methylobacter tundripaludum
SV96]
gi|344261195|gb|EGW21466.1| anti-sigma H sporulation factor, LonB [Methylobacter tundripaludum
SV96]
Length = 806
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 331/761 (43%), Positives = 468/761 (61%), Gaps = 67/761 (8%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R + P G T+ VV +G+ RF VQ + ARI E ++ + VE A
Sbjct: 108 RYITAPDG--THHVVCQGMQRFRVQAFLPGYPFLVARIERYEEPELSSKDVE------AR 159
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEIS-FEEQLVMLDSV 177
K A+E+++ + KQ + LAD+ +AS+ IS E+ +L
Sbjct: 160 VITLKQKALEVLA--QSKQPPDELVNAIRSIGSPPMLADL-IASYLISKATEKQEILALF 216
Query: 178 DLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDD 237
D++ R+ K EL++ ++ ++++ KI ++ + + + Q+EF+LR+QM+AI++ELG+ +
Sbjct: 217 DIQERIDKILELLNYQVEVLKLSNKINEQTQETMGQRQREFVLREQMKAIQKELGEEEGG 276
Query: 238 EDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKAS 297
++ + + +A MP + K +KEL RL+ M Y+ R YL+ + +LPW AS
Sbjct: 277 AAEIEEIGNAITAAKMPEEVEKQARKELGRLQHMPDASGEYSMIRTYLDWLTELPWSVAS 336
Query: 298 EEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLA 357
+ +D+ A+E L+ DHYGL ++KQRI+E+LAVRKL P+ + P+LCFVGPPGVGKTSL
Sbjct: 337 AGV-IDITKAREILNEDHYGLEKIKQRILEFLAVRKLNPNGKSPILCFVGPPGVGKTSLG 395
Query: 358 SSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEID 417
SIA A GR+FIR SLGG DEA+IRGHRRTYIG++PG +I +++ G NPV +LDE+D
Sbjct: 396 RSIARATGREFIRASLGGTHDEAEIRGHRRTYIGALPGNIIQSIRKAGTNNPVFMLDEMD 455
Query: 418 KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRM 477
K GS +GDP+SALLEVLDPEQN TF D+YL V FDLS V+F+ TAN IP PL DRM
Sbjct: 456 KLGSGFQGDPSSALLEVLDPEQNSTFRDNYLAVAFDLSHVMFIGTANVLDSIPGPLRDRM 515
Query: 478 EVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLE 537
EVIEL GYT +EKL+IA R+L+ R L+ GL E I E + +IQ YTREAG RNLE
Sbjct: 516 EVIELTGYTTDEKLQIAKRYLVQRQLESSGLTPEQCAITENAILTIIQDYTREAGCRNLE 575
Query: 538 RNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHE 597
R + ++ R A+++AE L +++ E IP
Sbjct: 576 REIGSVFRHVAMRIAES-----------------------LVVNEQIDSEHIP------- 605
Query: 598 VSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEAT 657
+LGP +FD + A R + PG++ GL WT GG++ F+EAT
Sbjct: 606 -------------------GILGPKKFDS-DVAMRTSVPGVATGLAWTPVGGDILFIEAT 645
Query: 658 AMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGA 717
+ G G+L LTGQLG+V+KESAQ AL+ V++RA +L L E + + DIH+H PAGA
Sbjct: 646 RLPGNGKLILTGQLGEVMKESAQAALSLVKSRAHELGLQPE----IFEKSDIHVHVPAGA 701
Query: 718 VPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIK 777
+PKDGPSAGV + TAL S FS K V+ D AMTGE++LRGLVLPVGG+K+K++AA R GI
Sbjct: 702 IPKDGPSAGVAMFTALYSAFSEKIVKNDVAMTGEISLRGLVLPVGGIKEKVIAAARAGIT 761
Query: 778 RVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
V+LP RN +D E+P AV L+ + ++++D L+ A E
Sbjct: 762 TVMLPARNQRDFEEIPEAVRNQLQFVWLEKVDDALKSAVEN 802
>gi|349858856|gb|AEQ20486.1| ATP-dependent protease La [uncultured bacterium CSL142]
Length = 831
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 336/781 (43%), Positives = 468/781 (59%), Gaps = 79/781 (10%)
Query: 43 IHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT 102
+HW G A L R + P G ++ + +G RF + E + AR+
Sbjct: 115 LHW--VGTTANVL---RYITAPDG--SHHAICQGQQRFRILEFLDGYPFPVARV------ 161
Query: 103 KIEMEQVEQ----DPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADI 158
EQ+ Q + D A + K AME++ +L Q + + +LAD
Sbjct: 162 ----EQIAQSDTLNSDIEARALNLKQRAMEILRLLPQVPED--MVAAIDNLKSPGQLADF 215
Query: 159 FVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEF 218
E+ E+ +L++ DL+ RL K EL+ ++ +R++++I ++ + + + ++
Sbjct: 216 IAGLMELGAAEKQDLLETFDLQKRLDKLLELLSHRIEVMRLSKEIDERTKESIDEQGRKH 275
Query: 219 LLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGY 278
LL +Q+R I++ELG+ D+ ++ LE+ + +A MP + K +KEL+RL++M Y
Sbjct: 276 LLHEQLRTIQKELGEGDERGAEIAELEKAIVAAKMPEEVEKQARKELKRLERMSEAAGEY 335
Query: 279 TSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDA 338
+ R YL+ + +LPW SE +D+ A+ LD DHYGL ++K+RI+EYLAVRKL P
Sbjct: 336 SMVRTYLDWLVELPWATESEP-PIDIAGARSILDGDHYGLDKIKKRILEYLAVRKLNPSG 394
Query: 339 RGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLI 398
R P+LCFVGPPGVGKTSL SIA A GRKFIR+SLGGV DEA+IRGHRRTYIGS+PG +I
Sbjct: 395 RSPILCFVGPPGVGKTSLGQSIAKATGRKFIRLSLGGVHDEAEIRGHRRTYIGSLPGNII 454
Query: 399 DGLKRVGVCNPVMLLDEIDKTGS-DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+++ N VM+LDE+DK G+ GDPASALLEVLDPEQN TF D YL VPFDLS V
Sbjct: 455 QNIRKAASRNCVMMLDEVDKLGAGGFHGDPASALLEVLDPEQNATFRDSYLGVPFDLSSV 514
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+F+ TAN IP PL DRME+I LPGYT +EKL+IA R+L+ R L GL + +I +
Sbjct: 515 MFICTANVLDTIPGPLRDRMEIIHLPGYTAQEKLQIARRYLVSRQLAATGLTPQQFEIDD 574
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+ ++I YTREAGVRNLER + + R AV +AE
Sbjct: 575 EALTMIIHDYTREAGVRNLEREIGNVMRHTAVLIAE------------------------ 610
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
G++T +V+ A + +LGP +F + EAA R + PG
Sbjct: 611 --------------GKATR-----------VVIGRADIPVILGPRKF-EAEAAMRTSIPG 644
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
++ GL WT GG++ F+EAT M G G L LTGQLGDV+KESAQ AL+ V+ARA L +
Sbjct: 645 VATGLAWTPVGGDILFIEATRMPGGGRLILTGQLGDVMKESAQAALSLVKARAVQLG-IN 703
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
DG++ + IHIH P+GA PKDGPSAGV + AL SL + + VR+DTAMTGE++LRGL
Sbjct: 704 TDGLDKMY---IHIHVPSGATPKDGPSAGVAIFVALTSLLTERPVRSDTAMTGEISLRGL 760
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VLPVGG+K+K+LAA + GI RV+LP RN K+L E+PA LE+I +++ A
Sbjct: 761 VLPVGGIKEKVLAALQAGISRVLLPARNQKELDEIPAEAREKLELIWIDHVDEAFASALS 820
Query: 818 G 818
G
Sbjct: 821 G 821
>gi|217979295|ref|YP_002363442.1| ATP-dependent protease La [Methylocella silvestris BL2]
gi|302425063|sp|B8EMF2.1|LON_METSB RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|217504671|gb|ACK52080.1| ATP-dependent protease La [Methylocella silvestris BL2]
Length = 810
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 326/796 (40%), Positives = 478/796 (60%), Gaps = 70/796 (8%)
Query: 24 ERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQ 83
+R+ + + G + ++ H GV A L R + G + ++ +G RF V+
Sbjct: 76 QRSVGILMQRESGAEEASPLNMHRFGVVANIL---RYITAQDG--GHHLICQGEQRFHVE 130
Query: 84 ELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT 143
E Y AR+ +E E E+ PD A + A E + +L Q T
Sbjct: 131 EFLRERPYLAARVKRIE------EPDERSPDIEARFVHLQGQASEALQLLPQ---TPPEL 181
Query: 144 KVLLETVPI-HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEK 202
+ + P L D+ A + S ++ +L+++DL+ R+ +L+ + ++ +R++++
Sbjct: 182 IAAVNSAPSPGALTDLVAAYMDASPAQKQDILETIDLRARMDMVAKLLAQRIEVLRLSQE 241
Query: 203 ITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQ 262
I ++ + L + Q+E LLR+QM +I+ +LG+ D ++ L + A MP+ + + +
Sbjct: 242 IGRQTKASLDERQREMLLREQMASIQRQLGEGDGKAQEIAELTEAIAKAKMPAEVEEAAR 301
Query: 263 KELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVK 322
KELRRL++M Y R Y++ + +LPW EE +D+ A+ LD+DH+GL ++K
Sbjct: 302 KELRRLERMPDASAEYGMIRTYIDWLIELPW-SLPEEAPIDIAEARRILDADHFGLDKIK 360
Query: 323 QRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADI 382
QRI+EYLAVRKL P + P+LCFVGPPGVGKTSL SIA A+GRKF+R+SLGGV DEA+I
Sbjct: 361 QRIVEYLAVRKLAPQGKAPILCFVGPPGVGKTSLGQSIARAMGRKFVRVSLGGVHDEAEI 420
Query: 383 RGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKT 442
RGHRRTY+G++PG +I +++ G N VM+LDEIDK G+ GDP SA+LEVLDPEQN T
Sbjct: 421 RGHRRTYVGALPGNIIQAIRKAGARNCVMMLDEIDKMGASAHGDPGSAMLEVLDPEQNST 480
Query: 443 FNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRV 502
F D+YL VPFDLS+V+F+ATAN +P PL DRME+I L GYT EKL IA R+L+ R
Sbjct: 481 FRDNYLAVPFDLSRVVFIATANMLDTVPGPLRDRMEIIALTGYTDREKLEIARRYLVRRQ 540
Query: 503 LDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPS 562
L+ +GL + ++I + + +I+ YTREAGVRNLER + + R AV++A+ S
Sbjct: 541 LEANGLKPDQVEIDDDALIEIIRGYTREAGVRNLEREIGRVLRHVAVRIADG-------S 593
Query: 563 SKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP 622
+ VH V A L ++LG
Sbjct: 594 ASHVH------------------------------------------VSRAELTELLGQQ 611
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
RF+D E A R++ PG++ GL WT GG++ F+EAT G G+L LTGQLG+V++ES Q A
Sbjct: 612 RFED-EVAMRLSVPGVATGLAWTPVGGDILFIEATRAPGHGKLTLTGQLGEVMRESVQAA 670
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
L+ +++RA +L + E DIH+H PAGA PKDGPSAGV + ALVS+ + + V
Sbjct: 671 LSLIKSRAAELGVDPES----FDKTDIHVHVPAGATPKDGPSAGVAMFIALVSILTGRLV 726
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R DTAMTGE++LRGLVLPVGG+K+K++AA R G+ RV+LP RN +D E+P LE
Sbjct: 727 RNDTAMTGEISLRGLVLPVGGIKEKVVAAARAGLTRVLLPARNRRDYDEIPQDTREKLEF 786
Query: 803 ILAKRMEDVLEQAFEG 818
+ ++++D + AFEG
Sbjct: 787 VWLEKVDDAMAAAFEG 802
>gi|221633008|ref|YP_002522233.1| ATP-dependent protease La [Thermomicrobium roseum DSM 5159]
gi|221156805|gb|ACM05932.1| ATP-dependent protease La [Thermomicrobium roseum DSM 5159]
Length = 832
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 313/673 (46%), Positives = 434/673 (64%), Gaps = 62/673 (9%)
Query: 151 PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQ 210
P+H L + ++ + EE+ +L+ ++ +L + + R L + + +KI +V+ +
Sbjct: 186 PLH-LVYLLASNLRMDPEERQALLELDSVRDKLLRLNAFMSRELDLLELGKKIQSEVQEE 244
Query: 211 LSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKK 270
+++SQ+EF LR+Q++AI+ ELG+ + E ++ K++ +GMP + +EL R+ K
Sbjct: 245 VARSQREFYLREQLKAIQRELGETSEQEAEINEFRAKIEQSGMPEEARREALRELERMSK 304
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
+ P Y R YL+ + LPW +++E ++D+ A++ LD DHY L ++K+RI+EYLA
Sbjct: 305 LPPASAEYGVIRTYLDWLVSLPWNRSTEG-EIDIARARQILDEDHYNLEKIKERILEYLA 363
Query: 331 VRKLKPD-------ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
VR+L+ + R P+LCFVGPPGVGKTSLA SIA ALGR F R+SLGGV+DEA+IR
Sbjct: 364 VRRLRKERGEDSEPGREPILCFVGPPGVGKTSLAQSIARALGRAFTRMSLGGVRDEAEIR 423
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIG+MPGR+I ++R G +PV +LDEIDK G+D RGDPASALLEVLDPEQN TF
Sbjct: 424 GHRRTYIGAMPGRIIQAIRRAGTNDPVFVLDEIDKVGTDWRGDPASALLEVLDPEQNSTF 483
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
DHYL+VPFDLSKV+F+ATAN IPP L DRME++ L GYT EEKL+IA R+LIP+
Sbjct: 484 RDHYLDVPFDLSKVMFIATANVLDTIPPALRDRMEILVLSGYTDEEKLQIARRYLIPKQF 543
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+H L E + + +IQ YTREAGVRNLER +AA+AR A
Sbjct: 544 RRHALNPEDFVFSDEAILEIIQHYTREAGVRNLEREIAAIARKLA--------------- 588
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPR 623
RLA+G E+ E+ T +V + F LG R
Sbjct: 589 ------------TRLAEGQEIPREI------TVDVVHEF----------------LGKRR 614
Query: 624 FDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIAL 683
+ E +ER + PG+++G+ T GG++ F+EAT M G+G L +TGQLG+V++ESAQ AL
Sbjct: 615 YHYEELSERTSQPGVAIGVGVTPVGGDIMFIEATRMPGRGNLIITGQLGEVMRESAQAAL 674
Query: 684 TWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVR 743
+ VR+RA + + ++ DIHIH P+GA+PKDGPSAGVTLVTALVSL + VR
Sbjct: 675 SIVRSRAEQFGIEP----DFMKDSDIHIHVPSGAIPKDGPSAGVTLVTALVSLLTGIPVR 730
Query: 744 ADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEII 803
D AMTGE+TLRG VLPVGG+K+K LAA R GIK ILP+RN DL E+P + ++ +
Sbjct: 731 EDVAMTGEITLRGQVLPVGGIKEKALAAQRAGIKVFILPKRNEMDLDELPPTLRENMRFV 790
Query: 804 LAKRMEDVLEQAF 816
L + ++DVL A
Sbjct: 791 LVETIDDVLRAAM 803
>gi|220929967|ref|YP_002506876.1| ATP-dependent protease La [Clostridium cellulolyticum H10]
gi|220000295|gb|ACL76896.1| ATP-dependent protease La [Clostridium cellulolyticum H10]
Length = 779
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 327/753 (43%), Positives = 451/753 (59%), Gaps = 72/753 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T V++EG+ R +++ ++ A + + E+D D + +A
Sbjct: 89 TIRVLVEGINRAEIKKFVQDDPFFIAEVVE--------SKTEEDFD----ENEVEALKRR 136
Query: 129 LISVLEQKQKTGGRTK-----VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
LIS E+ K G+ ++E I +++DI + + E++ +L R+
Sbjct: 137 LISAFEEYVKLSGKVSPDTALSVVEISNISQVSDIIANNIPLKVEQKQAILSEFHPLRRV 196
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K E++ + ++ + + + I KV Q+ K QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 197 EKLLEILYQEIEILEIEKDINTKVRKQIDKLQKEYYLREQMKAIQTELGDREGVAGEVEE 256
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
K++SA +P + K VQKEL RL KM R YL+ I DLPW K+++E +D
Sbjct: 257 YREKLKSAELPEEVEKKVQKELDRLLKMPQGSAEGGVIRTYLDWIFDLPWNKSTQE-HID 315
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
LK+A+E L+ DHYGL +VK+RIIEYLAV+KLK +GP+LC VGPPGVGKTS+A SIA A
Sbjct: 316 LKSAEEILEKDHYGLTKVKERIIEYLAVQKLKNSLKGPILCLVGPPGVGKTSIAKSIAKA 375
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R ++RISLGGVKDE++IRGHRRTY+GSMPGR+I LK+ G NP++LLDEIDK SD
Sbjct: 376 LNRNYVRISLGGVKDESEIRGHRRTYVGSMPGRIISALKQAGSNNPLILLDEIDKMSSDF 435
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDPASA+LEVLD EQN F DHY+ +PF+LS +F+ TAN IP PLLDRME+I L
Sbjct: 436 RGDPASAMLEVLDSEQNFAFRDHYMELPFNLSNALFLTTANTLDTIPRPLLDRMEIINLS 495
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
YT E+K IAM++L+P+ + HGL S ++I E V+ +I YTREAGVRNLER + ++
Sbjct: 496 SYTEEDKANIAMKYLLPKQMKLHGLTSRNIRIDEGTVRDIINYYTREAGVRNLEREIGSV 555
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A K+ E +++
Sbjct: 556 CRKVA-KIIVSENKKS-------------------------------------------- 570
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+ V+ LEK LG RF A ER GI+ GL WT GG+ +E M+GKG
Sbjct: 571 ----VTVNRNNLEKFLGVKRFRFDYAGER-DEIGIARGLAWTPVGGDTLSIEVNLMQGKG 625
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG LGDV+KESA+ A++++R+R +L + + + DIHIH P GA+PKDGP
Sbjct: 626 KLELTGHLGDVMKESAKAAMSFIRSRCKELNINEQ----FHEENDIHIHVPEGAIPKDGP 681
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+TL TA+VS S V AMTGE+TLRG VLP+GG+K+K+LAAHR GI+ +ILP
Sbjct: 682 SAGITLATAMVSALSGVPVSRKVAMTGEITLRGRVLPIGGLKEKVLAAHRAGIETIILPI 741
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N KD+ E+P V SL I A M+ VLE A
Sbjct: 742 DNKKDIEEIPQNVRKSLNFICASDMQTVLENAL 774
>gi|218779097|ref|YP_002430415.1| ATP-dependent protease La [Desulfatibacillum alkenivorans AK-01]
gi|302425046|sp|B8F9K1.1|LON_DESAA RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|218760481|gb|ACL02947.1| ATP-dependent protease La [Desulfatibacillum alkenivorans AK-01]
Length = 826
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 329/769 (42%), Positives = 470/769 (61%), Gaps = 68/769 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G AAR L R ++ P GRV V+++GL + + + + + RI L E +
Sbjct: 87 GTAARIL---RVLKLPDGRVK--VLVQGLAKAKIVRYTKKSDMFRVRIELLH----EEDL 137
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFE 168
+ D + AL R K + +++ + + + T T VL +LAD+ ++ + E
Sbjct: 138 GDLDMETEALMRNVKESCEKILGL--RGELTPDVTMVLDGIDHPGRLADLVASNLNLKIE 195
Query: 169 EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIK 228
E + +++D RL V R ++ + +I V ++SKSQK++ LR+QMRAI
Sbjct: 196 EAQSIFETIDPVQRLLAVNGFVSREVELSAMQARIQSSVRDEISKSQKDYFLREQMRAIN 255
Query: 229 EELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELI 288
ELG+ D+ ++ + K++ A MP + +++L+RL++M P+ + R YL+ +
Sbjct: 256 RELGEMDEKTQEIKEYQDKIRKAKMPKEAKEEAERQLKRLEQMHPEAGEAPTVRTYLDWL 315
Query: 289 ADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGP 348
++PW+KA+++ LD+K AKE L+ DHYGL +VK RI+EYLAVRKL P +GP+LCFVGP
Sbjct: 316 VEVPWKKATKDT-LDIKKAKEILEEDHYGLEKVKDRILEYLAVRKLNPKMKGPILCFVGP 374
Query: 349 PGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCN 408
PGVGKTSL SIA A+GRKF R+SLGG++DEA+IRGHRRTYIG++PGR+I GLK N
Sbjct: 375 PGVGKTSLGKSIARAMGRKFYRLSLGGIRDEAEIRGHRRTYIGALPGRIIQGLKHCKSNN 434
Query: 409 PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQP 468
PV ++DEIDK G+D RGDP+SALLE LDPEQN F+DHYLNVPFDLS V+F+ TAN
Sbjct: 435 PVFMMDEIDKIGADFRGDPSSALLEALDPEQNFAFSDHYLNVPFDLSSVMFITTANMTDT 494
Query: 469 IPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIP-EAMVKLVIQRY 527
IP LLDRMEVI L GYT EK+ IA ++L+PR + ++GL E + I A++K+ + Y
Sbjct: 495 IPSALLDRMEVINLAGYTENEKVLIAQQYLVPRQVKENGLKPEDITISGNALLKMATE-Y 553
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
T E+G+RNLER + L R + K+AE ++
Sbjct: 554 TSESGLRNLEREIGTLCRKVSRKIAEGKK------------------------------- 582
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
++IT+ +V LEK L P D E G++ GL WT++
Sbjct: 583 ------------GPYQITASSLVKYLGLEKFL--PEMDQEE-----PQIGLATGLAWTHW 623
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGR 707
GGE ++E T MRGKGEL LTGQLG+V++ESA+ AL++ R +L++ +L
Sbjct: 624 GGEALYIETTLMRGKGELVLTGQLGEVMQESARAALSYARTNEDELEI----DPDLFDNF 679
Query: 708 DIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDK 767
DIHIH PAGA+PKDGPSAG+ + TALVS + + V D AMTGE+T+RG VLP+GG+++K
Sbjct: 680 DIHIHVPAGAIPKDGPSAGIAMTTALVSALTERPVANDIAMTGEVTIRGRVLPIGGLREK 739
Query: 768 ILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
L A R GIK +I+PE+N K+L EVP V L+ I + +VLE+A
Sbjct: 740 SLGALRAGIKTIIIPEKNKKELSEVPQQVRRKLKYITVSHVNEVLEKAL 788
>gi|297544144|ref|YP_003676446.1| ATP-dependent protease La [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841919|gb|ADH60435.1| ATP-dependent protease La [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 778
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 326/753 (43%), Positives = 464/753 (61%), Gaps = 68/753 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R +Q+++ ++ + E K ++E+ P+ AL R + E ++
Sbjct: 87 VLVEGISRAEIQQITRDDEFFEVEVIEKEEQK----EIEKTPELEALMRSVTSAFKEYVN 142
Query: 132 VLEQKQKTGGRTKVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATE 188
+ +G + L + I +LAD+ A ++ + +L+ D+ RL E
Sbjct: 143 M-----TSGLPIESLYSVLNIEEPGRLADMIAAHISLNTNQSQQLLECFDVNKRLETLLE 197
Query: 189 LVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKM 248
+ + L+ + + ++I KV ++ K QKE+ LR+Q++AIK ELG+ D+ + ++ E+K+
Sbjct: 198 FLMKELEILSIEKEINAKVRSRIDKLQKEYYLREQLKAIKAELGETDEIDQEVEEYEKKI 257
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAK 308
+ +P + K ++EL+RL KM P + R YL+ I DLPW +E+I LDLK A+
Sbjct: 258 EEKDLPEEVRKKAKEELKRLSKMAPGSAEASVVRTYLDWILDLPWNYETEDI-LDLKRAQ 316
Query: 309 ERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF 368
+ LD DHYGL +VK+RIIE+LAVR + P+LC VGPPGVGKTSL SIA A+ RKF
Sbjct: 317 KILDEDHYGLKKVKERIIEFLAVRSFYNKIKSPILCLVGPPGVGKTSLGRSIARAMNRKF 376
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
+R+SLGGV+DEA+IRGHRRTY+G++PG +I+ +K G NPV LLDEIDK SD RGDPA
Sbjct: 377 VRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSIKIAGSKNPVFLLDEIDKMSSDFRGDPA 436
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
SA+LEVLDPEQN TF DHYL++PFDLSKV+F+ TAN IP PLLDRME+I + GYT E
Sbjct: 437 SAMLEVLDPEQNSTFRDHYLDLPFDLSKVLFITTANTTDTIPAPLLDRMEIIYVSGYTEE 496
Query: 489 EKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA 548
EKL IA +LIPR+L +HG+ + I E+ + +I YTREAGVR LE+NL+ + R A
Sbjct: 497 EKLHIAKDYLIPRILKEHGVPDNKIIIQESAIYGIISEYTREAGVRGLEKNLSQIVRKAI 556
Query: 549 VKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPL 608
K+ E+ +VI +G+
Sbjct: 557 KKIVEENA------------------------------QVIKVGKRN------------- 573
Query: 609 VVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLT 668
L+ LG P + +A ++ GI GL WT GGE+ VEA+ M G G+L+LT
Sbjct: 574 ------LQSYLGKPIYRTDKANQK-DEIGIVFGLAWTRVGGEILTVEASIMPGSGKLNLT 626
Query: 669 GQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVT 728
GQLGDV+KESAQ L+++RA A L + + + DIHIH P GA+PKDGPSAG+T
Sbjct: 627 GQLGDVMKESAQAGLSYIRANADKLNI----DKDFYKNVDIHIHVPEGAIPKDGPSAGIT 682
Query: 729 LVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKD 788
+VTA+VS + VR D AMTGE+TL G +LP+GGVK+K+LAA+R GI +VILP+ N +D
Sbjct: 683 MVTAMVSALKKVPVRKDVAMTGEITLTGKILPIGGVKEKVLAANRAGITKVILPQENKRD 742
Query: 789 LVEVPAAVLASLEIILAKRMEDVLEQAF-EGGC 820
L E+P +V LE +R+++VL+ A + GC
Sbjct: 743 LDEIPQSVKRKLEFKFVERIDEVLDFALVKEGC 775
>gi|386714983|ref|YP_006181306.1| ATP-dependent protease La [Halobacillus halophilus DSM 2266]
gi|384074539|emb|CCG46032.1| ATP-dependent protease La [Halobacillus halophilus DSM 2266]
Length = 776
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 330/783 (42%), Positives = 471/783 (60%), Gaps = 92/783 (11%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE----- 100
++ G AR + V+ P+G T V++EGL R ++ E+S +Y A I LE
Sbjct: 67 YSVGTVARVKQM---VKLPNG--TNRVLVEGLYRATIDEVSEGDEFYQANIHRLEDEHED 121
Query: 101 ------MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHK 154
+ + M Q EQ ++ +S++ +S +++ P H
Sbjct: 122 KNEEEALMRTLMSQFEQ---YVKVSKKVSQETYNTVSDIDE---------------PSH- 162
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LADI + + +++ +L++ ++K RL K EL+ +++ +KI Q+V+ + K+
Sbjct: 163 LADIVTSHLPVKLKDKQSILETENVKARLQKLIELIGNERDVLQIEQKIGQRVKKSMEKT 222
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
QKE+ LR+QM+AI+ ELGD D ++ L+ K++ A MP + K KEL R +K+ PQ
Sbjct: 223 QKEYYLREQMKAIQNELGDKDGKTGEVAQLKEKIEEAEMPERVEKIAYKELGRYEKV-PQ 281
Query: 275 QPGYTSS-RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
+S R Y+E + LPW +E+ +LD+K A++ LD DHYGL +VK+R++EYLAV+K
Sbjct: 282 SSAESSVIRNYIEWLVSLPWTAETED-NLDVKHAEKILDEDHYGLEKVKERVLEYLAVQK 340
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LC VGPPGVGKTSLA SIA A+ R F+RISLGGV+DEA+IRGHRRTYIG+M
Sbjct: 341 LTQSIKGPILCLVGPPGVGKTSLAKSIARAINRNFVRISLGGVRDEAEIRGHRRTYIGAM 400
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I G+KR NPV L+DEIDK SD RGDP+SA+LEVLDPEQN TF+DH++ +D
Sbjct: 401 PGRIIQGMKRAETVNPVFLMDEIDKMASDFRGDPSSAMLEVLDPEQNSTFSDHFIEEHYD 460
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+FVATAN IP PL DRMEVI + GYT EKL IA HL+ + + ++GL +
Sbjct: 461 LSKVMFVATANTMSSIPGPLQDRMEVINIAGYTEVEKLHIAKEHLLSKQIKENGLSKGQI 520
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
QI E + +I+ YTREAGVR LER LA++ R AA + E+++ + + K
Sbjct: 521 QIREDALLKLIRTYTREAGVRGLERELASICRKAAKIIVSGEKQRVVVTEK--------- 571
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LE++LG P+F + AE
Sbjct: 572 ----------------------------------------QLEELLGRPKFRYGQ-AELE 590
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G + GL +T GG+ +E + GKG L LTG+LGDV+KESAQ A +++R+RA +L
Sbjct: 591 DQIGTATGLAYTAAGGDTLSIEVSIYPGKGNLTLTGKLGDVMKESAQAAFSYIRSRAQEL 650
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ A + ++ DIHIH P GA PKDGPSAG+T+ TALVS + + VR + MTGE+T
Sbjct: 651 NIDA----DFVEKNDIHIHVPEGATPKDGPSAGITIATALVSALTGRPVRKEVGMTGEIT 706
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K K L+AHR G+ ++I+P N KDL ++P +V L I K +++VL
Sbjct: 707 LRGRVLPIGGLKQKSLSAHRAGLSKIIIPSENEKDLEDIPESVREGLTFIPVKHLDEVLN 766
Query: 814 QAF 816
QA
Sbjct: 767 QAL 769
>gi|374287012|ref|YP_005034097.1| ATP-dependent protease [Bacteriovorax marinus SJ]
gi|301165553|emb|CBW25124.1| ATP-dependent protease [Bacteriovorax marinus SJ]
Length = 805
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 324/765 (42%), Positives = 463/765 (60%), Gaps = 81/765 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQF- 122
P GR+ +V +GL + + ++ +++ +E +E V + + Q
Sbjct: 90 PDGRIKILV--QGLSKARILNFDQTEPFFVTKVAKVEDVAVESGAVAVNALMRNIREQLE 147
Query: 123 ------KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
K + +++ VLE Q G +LAD+ ++ + E ++L+
Sbjct: 148 RVITLGKVLSPDILMVLEDIQDPG-------------RLADLVASNLNLHVGEAQMILEV 194
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+D RL K +++ R L+ + + +KI + +++KSQKE+ LR+Q++AIK ELGD +
Sbjct: 195 LDPVERLHKINDILSRELEILAMQQKIKHVAKDEINKSQKEYFLREQIKAIKSELGDENS 254
Query: 237 D--EDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWE 294
+ ED+ K+ + MP K K+L+RL+KM P + R YLE + DLPW
Sbjct: 255 EQPEDEFEEFRNKINACKMPEEAEKEAMKQLQRLEKMHPDSSESSILRSYLEWLTDLPWS 314
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKP-DARGPVLCFVGPPGVGK 353
S+E+ DL+ A+ LD DH+ L +VK+RI+EYLAVRKLK +GP+LCF GPPGVGK
Sbjct: 315 ATSDEV-YDLEEAQAILDEDHFDLDKVKERILEYLAVRKLKDGKMKGPILCFSGPPGVGK 373
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSL SIA A GR+F+RI+LGGVKDEA+IRGHRRTY+GSMPGR I LK+ NPV+LL
Sbjct: 374 TSLGKSIAKATGREFVRIALGGVKDEAEIRGHRRTYVGSMPGRFIQALKQAKTNNPVILL 433
Query: 414 DEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPL 473
DE+DK G D +GDP+SALLEVLDPEQN F DHYLNVPFDLS V+F+AT+N + IP PL
Sbjct: 434 DEVDKLGGDFKGDPSSALLEVLDPEQNMNFRDHYLNVPFDLSNVMFIATSNVLENIPGPL 493
Query: 474 LDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGV 533
DRMEV+ L GYT EEK+ I ++LIP+ ++++G+ E ++ + V+ VI+ +T EAG+
Sbjct: 494 RDRMEVLNLSGYTQEEKVAITKKYLIPKQMNENGITDEHIEFTDEGVQTVIKNFTSEAGL 553
Query: 534 RNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGE 593
RNLER + AL R A K+A+ G + ++IP
Sbjct: 554 RNLERRIGALCRKVATKIAK---------------------------GEVTKTQIIP--- 583
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
+EV E +LGPP + +E + G++ GL WT GGE+ +
Sbjct: 584 --NEV-----------------ETLLGPPIY-TKEDEKEYDEVGVATGLAWTAHGGEILY 623
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E+T M+GKG L LTGQLGDV+KESAQ A+ ++R+RA++L V+E + +IHIH
Sbjct: 624 IESTKMKGKG-LTLTGQLGDVMKESAQTAIGYIRSRASELG-VSESA---FEENEIHIHL 678
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
PAGA PKDGPSAG+TL T +VSL + V + AMTGE+TL G VLP+GG+K+K LAA R
Sbjct: 679 PAGATPKDGPSAGITLATTIVSLLTDTPVSKEVAMTGEITLTGKVLPIGGLKEKALAAMR 738
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
IK +I+P +N KDL+++P L + K +++VLE A G
Sbjct: 739 MNIKTIIIPWKNKKDLIDIPEEYRKKLNFVPVKSIDEVLEVALVG 783
>gi|374997638|ref|YP_004973137.1| ATP-dependent protease La [Desulfosporosinus orientis DSM 765]
gi|357216004|gb|AET70622.1| ATP-dependent protease La [Desulfosporosinus orientis DSM 765]
Length = 806
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 337/762 (44%), Positives = 460/762 (60%), Gaps = 82/762 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T +++EG+ R + E Y+ RI L K M P+ L R
Sbjct: 80 PGG--TMRILVEGITRGRILEYLQEDEYFEVRIEELAEEKRAM-----TPELETLIRG-- 130
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPI-------HKLADIFVASFEISFEEQLVMLDS 176
+ E+ K G R V LET+ +LADI + + ++ +L++
Sbjct: 131 -----MTHQFEEYAKLGKR--VPLETIGTVLAVEEPGRLADIVASHLNLKVPDKQTILEA 183
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+ +++RL + TEL+ R ++ + + +I Q+V Q+ K+QKE+ LR+QM+AI++ELGD D+
Sbjct: 184 MSIELRLERLTELIMREIELLELERRIGQRVRKQMDKAQKEYYLREQMKAIQKELGDKDE 243
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+ + K+ A +P + KE+ RL+KM P T R YL+ + LPW K
Sbjct: 244 RQAEADEYREKVAKAKLPKEAEEKALKEIDRLEKMPPASAEGTVVRTYLDWLLVLPWNKT 303
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
+ + +DL A+E L+ DHYGL +VK+RI+E+LA+RKL P + P+LC VGPPGVGKTSL
Sbjct: 304 TRD-KIDLIKAEEILNEDHYGLEKVKERILEFLAIRKLTPKMKSPILCLVGPPGVGKTSL 362
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
A SI+ +L RKF+R+SLGG++DEA+IRGHRRTYIG++PGR+I G++ G N V LLDEI
Sbjct: 363 AKSISRSLNRKFVRMSLGGLRDEAEIRGHRRTYIGALPGRIIQGVRTAGTKNSVFLLDEI 422
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK SD RGDPASALLEVLDPEQN TF DHYL +PFDLS+ +FV TAN IP PLLDR
Sbjct: 423 DKMTSDFRGDPASALLEVLDPEQNSTFTDHYLELPFDLSQTLFVLTANTLHTIPRPLLDR 482
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVI L GYT +EK+ IA ++L+P+ L+ HGL E + + ++ ++Q YTRE+GVR L
Sbjct: 483 MEVITLSGYTEDEKVNIASKYLVPKQLEAHGLSKEVFTLEDDILLKLVQGYTRESGVRGL 542
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER +A L R AV+ ++E E +++D+ EST
Sbjct: 543 ERQVANLCRKIAVRWVKEEWEPHTLTAEDL--------------------------EST- 575
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAP--GISVGLVWTNFGGEVQFV 654
LG PR+ + AA+ AP G GL +T GG V V
Sbjct: 576 ----------------------LGAPRYHFQTAAK---APEIGAVTGLAFTEVGGVVLTV 610
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFP 714
E T + GKG L LTGQLGDV+KESAQ A T++RA A+ L + ED D+HIH P
Sbjct: 611 EVTPLPGKGRLTLTGQLGDVMKESAQAAWTFIRAYASQLG-IEED---FYDRTDLHIHVP 666
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
GA PKDGPSAG+T+ TA+ S +++ VR+D AMTGE+TLRG VLP+GGVK+K+LAAHR
Sbjct: 667 EGATPKDGPSAGITMATAMASAIAKRYVRSDLAMTGEITLRGNVLPIGGVKEKVLAAHRA 726
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GIK V+LPE N KD E+P V LE R+E+VL+ A
Sbjct: 727 GIKVVVLPEENRKDFEEIPENVRKVLEFHFVSRIEEVLKLAL 768
>gi|189425862|ref|YP_001953039.1| ATP-dependent protease La [Geobacter lovleyi SZ]
gi|302425058|sp|B3E7K2.1|LON_GEOLS RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|189422121|gb|ACD96519.1| ATP-dependent protease La [Geobacter lovleyi SZ]
Length = 816
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 327/775 (42%), Positives = 475/775 (61%), Gaps = 74/775 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A + R ++ P GRV +V +GL + + E ++T RI L + +
Sbjct: 85 YNVGTVAMIM---RMLKLPDGRVKILV--QGLVKARIAEFVEFKPFHTVRIERL-VEPVA 138
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFE 164
++ +E + AL R + +L + E ++ V+LE + +AD+ ++
Sbjct: 139 VDNLETE----ALMRTVRE---QLAKIAELGKQISPEVMVILENITDPGSMADLIASNLG 191
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+ E ++L+ D RL+K +L+ R + + V +I ++ K+QKE+ LR+QM
Sbjct: 192 LKLSEAQMLLEIEDPVRRLTKVNDLLAREHEMLSVQAQIQNAAREEMGKNQKEYYLREQM 251
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+AI++ELGD+D E+ L L + +++A MP N+ K K+L RL++M R Y
Sbjct: 252 KAIQQELGDHDGKEE-LEELRKAIETARMPENVEKEALKQLGRLERMHGDSGEAGVIRTY 310
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
L+ + ++PW K + + LD+ AK+ LD DH L +VK+RI+E+LAVRKL +GP+LC
Sbjct: 311 LDWLIEIPWSKTTRD-SLDIIRAKKILDEDHSYLDKVKERILEFLAVRKLNKQMKGPILC 369
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
FVGPPGVGKTSL SIA AL RKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I G+K+
Sbjct: 370 FVGPPGVGKTSLGKSIARALNRKFVRISLGGVRDEAEIRGHRRTYLGALPGRIIQGMKQA 429
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G NPV +LDE+DK G D +GDP++ALLEVLDP+QN F+DHY+N+P+DLS V+FVATAN
Sbjct: 430 GTRNPVFMLDELDKLGYDYKGDPSAALLEVLDPQQNNAFSDHYVNLPYDLSNVLFVATAN 489
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
+ PIP L DRMEVI +PGYT EEKL IA+R+L+PR + +GL ++ + E +K +I
Sbjct: 490 HSDPIPSALFDRMEVINIPGYTEEEKLEIAIRYLVPRQMKDNGLKAKHIVFEEEALKEII 549
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEV 584
+YTREAG+RNLER + + R A K+AE + Q
Sbjct: 550 AKYTREAGLRNLEREIGNVCRKVARKIAEGHKRQ-------------------------- 583
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRF--DDREAAERVAAPGISVGL 642
R+T A + LG +F DD V G+ GL
Sbjct: 584 -----------------IRVTP------AAVATFLGAAKFLRDDEMDKNEV---GVVNGL 617
Query: 643 VWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN 702
WT+ GGEV +EAT M GKG + LTGQLGDV+KES Q AL ++R+ ++ + +
Sbjct: 618 AWTSVGGEVLHIEATTMAGKGGMALTGQLGDVMKESVQAALAYIRSHGSEFHI----NPD 673
Query: 703 LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVG 762
Q +IH+H PAGAVPKDGPSAG + TAL+S+ ++ V+ D AMTGE++LRG VLP+G
Sbjct: 674 WFQENEIHVHVPAGAVPKDGPSAGCAMATALISVLTKVPVKKDVAMTGEISLRGKVLPIG 733
Query: 763 GVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
G+K+KILAA R G+K VI+PE+N KDL ++P A+ ++I+ K +++VL+ A E
Sbjct: 734 GLKEKILAAVRAGMKMVIIPEQNRKDLEDIPKAMQKKVKIVPVKEIDEVLKLALE 788
>gi|168215328|ref|ZP_02640953.1| ATP-dependent protease La [Clostridium perfringens CPE str. F4969]
gi|168217821|ref|ZP_02643446.1| ATP-dependent protease La [Clostridium perfringens NCTC 8239]
gi|170713292|gb|EDT25474.1| ATP-dependent protease La [Clostridium perfringens CPE str. F4969]
gi|182380157|gb|EDT77636.1| ATP-dependent protease La [Clostridium perfringens NCTC 8239]
Length = 776
Score = 587 bits (1513), Expect = e-164, Method: Compositional matrix adjust.
Identities = 316/748 (42%), Positives = 456/748 (60%), Gaps = 62/748 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R + E + A I +++ E D + ALSR+ K E +
Sbjct: 87 VLVEGIERAKMDEFFDKEELLEASIEKIDIDN------EIDHELEALSRKLKDDFFEFLD 140
Query: 132 VLEQKQKTG-GRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+ G L E ++K+ D+ + I E++ +L ++DLK R+ K V
Sbjct: 141 ITASSGINGVDLFDNLEEEKDLNKVTDLISSYALIKQEDKQDILQTLDLKKRIEKLIFYV 200
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
++ ++ ++I KV+ +L K Q+E+ LR+QM+ I+EELG++DD++ ++ E+ +
Sbjct: 201 KEEIEVAKIEKRIGTKVKKKLDKGQREYYLREQMKVIQEELGEDDDNKKAIIEFEKLINE 260
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
+P+ + + Q E+ +LK P +R YLE + D+PW + +E+ L++K A++
Sbjct: 261 KKLPNQVKEKAQYEISKLKASSPYSQDGGVTRTYLENLLDMPWGEFTEDT-LNIKDARKV 319
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DHYGL VK RI+EYLAV+++ RGP+LC VGPPGVGKTS+A S+A++L RKF+R
Sbjct: 320 LDKDHYGLKDVKDRILEYLAVKQISNSLRGPILCLVGPPGVGKTSIAKSVATSLNRKFVR 379
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV+DEADIRGHRRTY+G++ GR++ GLK NPV LLDEIDK G D +G+PA A
Sbjct: 380 MSLGGVRDEADIRGHRRTYVGAISGRIVTGLKEAKSMNPVFLLDEIDKLGMDFKGNPADA 439
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEV D EQNKTF DHYL V DLS+V+F+ TAN IP PLLDRME+IE+ GYT EEK
Sbjct: 440 LLEVFDNEQNKTFRDHYLEVDVDLSEVMFITTANSLDGIPRPLLDRMELIEVSGYTYEEK 499
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
RIA ++L+P+VL +HG+ ++ + I ++ +KL+I YTRE+GVRNL+R +A + R
Sbjct: 500 FRIAKKYLVPKVLKEHGVDNKIITISDSALKLIIDSYTRESGVRNLQRQIANVIRKGIKD 559
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
+ E++++ S+K
Sbjct: 560 IIEKDKKNLNISTK---------------------------------------------- 573
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
++EK LGP F E ++ G+ G+ WT +GG+ VE M GKG L LTGQ
Sbjct: 574 ---LVEKYLGPKIF-SYEEIDKEDKVGVVTGMAWTAYGGDTLPVEVMVMDGKGRLELTGQ 629
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESA+ A ++VRA +L + E +DIHIH P GAVPKDGPSAGVT+
Sbjct: 630 LGDVMKESARAAYSYVRAHMKELGIKDE----FYSKKDIHIHAPEGAVPKDGPSAGVTMT 685
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TALVS + K+V+ + AMTGE+TL G VL +GG+K+K LAA R GI VI+P+ N KD++
Sbjct: 686 TALVSALTGKKVKHNVAMTGEITLTGKVLAIGGLKEKCLAARRVGIDTVIVPKENEKDVI 745
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEG 818
++P V SL IILA +++DVLE A G
Sbjct: 746 KLPKIVKDSLNIILADKIDDVLENALVG 773
>gi|239827922|ref|YP_002950546.1| ATP-dependent protease La [Geobacillus sp. WCH70]
gi|239808215|gb|ACS25280.1| ATP-dependent protease La [Geobacillus sp. WCH70]
Length = 774
Score = 587 bits (1512), Expect = e-164, Method: Compositional matrix adjust.
Identities = 318/781 (40%), Positives = 482/781 (61%), Gaps = 84/781 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI--------S 97
+ G AR L ++ P+G T+ V++EG+ R + E + Y+ ++
Sbjct: 67 YQMGTLARVKQL---LKLPNG--TFRVLVEGIARAIITETVSEEPYFMVKVEKFVDRTTK 121
Query: 98 SLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
LE ++ +E +I LS++ A I+ +++ GR +AD
Sbjct: 122 DLEDEALKRTMLEYFEQYINLSKRLSADIYASIADIDEP----GR------------MAD 165
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
I + + EE+ +L+++D+K R+ K +++ + +++ +KI+ +V+ + ++QKE
Sbjct: 166 IIASHLPLKLEEKQRILETIDVKERIHKIIQILHNEKEVLQLEKKISMRVKQSMERTQKE 225
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ LR+QM+AI++ELG+ + ++ AL+ K+++AGMPS++ + KEL R +K+
Sbjct: 226 YYLREQMKAIQKELGEKEGKAGEVEALKEKIEAAGMPSHVKETALKELDRYEKIPATSAE 285
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + LPW +E+I D+K A+ L+ DHYGL +VK+R++E+L+V++L
Sbjct: 286 SAVIRNYLDWLIALPWSTQTEDIH-DIKRAEAILNEDHYGLEKVKERVLEFLSVQQLTKS 344
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC GPPGVGKTSLA SIA +L R+F+RISLGGV+DE++IRGHRRTY+G+MPGR+
Sbjct: 345 LKGPILCLAGPPGVGKTSLARSIAKSLNRRFVRISLGGVRDESEIRGHRRTYVGAMPGRI 404
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
I G+K+ G NPV LLDEIDK SD RGDP++ALLEVLDPEQN TF+DHY+ P+DLSKV
Sbjct: 405 IQGMKKAGTINPVFLLDEIDKMSSDFRGDPSAALLEVLDPEQNHTFSDHYIEEPYDLSKV 464
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+F+ATAN IP PLLDRME+I +PGYT EKL+IA RHL+P+ L +HGL LQ+ +
Sbjct: 465 MFIATANNLATIPQPLLDRMEIITIPGYTEVEKLQIAKRHLLPKQLKEHGLKKSSLQVRD 524
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+ +I+ YTREAGVR LER +AA+ R AA + +E+++ + + K++
Sbjct: 525 DAMMSIIRYYTREAGVRELERQIAAICRKAARLIVSEEKKRVIITEKNIEEF-------- 576
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
+G+ + R+ E ++V G
Sbjct: 577 -------------LGKRKY--------------------------RYGQAELEDQV---G 594
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
++ GL +T FGG+ +E + GKG+L LTG+LGDV+KESAQ A ++VR+RA L + +
Sbjct: 595 VATGLAYTAFGGDTLSIEVSLAPGKGKLVLTGKLGDVMKESAQAAFSYVRSRAEQLGIDS 654
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
E + DIHIH P GAVPKDGPSAG+T+ TAL+S + + V MTGE+TLRG
Sbjct: 655 E----FHEKYDIHIHVPEGAVPKDGPSAGITIATALISALTGRPVNRFVGMTGEITLRGR 710
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VLP+GG+K+K L+AHR G+K+VILP+ N KDL ++P V L+ +L +++VL+ A
Sbjct: 711 VLPIGGLKEKTLSAHRAGLKKVILPKDNEKDLEDIPDVVKNDLQFVLVSHLDEVLQHALV 770
Query: 818 G 818
G
Sbjct: 771 G 771
>gi|237747618|ref|ZP_04578098.1| DNA-binding ATP-dependent protease La [Oxalobacter formigenes
OXCC13]
gi|229378980|gb|EEO29071.1| DNA-binding ATP-dependent protease La [Oxalobacter formigenes
OXCC13]
Length = 807
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/751 (42%), Positives = 455/751 (60%), Gaps = 75/751 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
VV +G RF ++E+ + AR+ ++ + E + + A Q K A+E++
Sbjct: 112 VVCQGEGRFRLKEILDGYPFLVARVEEIQ------GEPEDNAEIQARLLQLKQKALEVLQ 165
Query: 132 VL-----EQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
++ E G T L L+D+ ++S EE+ +L++ DLK RL +
Sbjct: 166 LIPEVPQELSDSINGVTSASL-------LSDLITGLMDLSPEEKQEILETSDLKNRLDRL 218
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
LV+ L+ +RV+ I ++ + +L +E LLR+Q+R I+ +LGD DD + L
Sbjct: 219 LSLVNYRLEVLRVSRDIDEQTKNRLDDRHREALLREQLRTIQTQLGDIDDSSSEAAELAE 278
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K+++A MP + H KEL R + M Y+ YLE + +LPW +SE+ D+
Sbjct: 279 KIENAKMPEEVKTHALKELNRFRNMSESSGEYSMLHTYLEWLTELPWAISSED-RTDIAE 337
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A++ LD DHYGL +VK+RI+E+LAV KL P+ + P+LCF+GPPGVGKTSL SIA A GR
Sbjct: 338 ARKILDEDHYGLEKVKKRILEFLAVHKLNPEGKSPLLCFIGPPGVGKTSLGQSIAKATGR 397
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
+F+R+S+GGV DEA+IRGHRRTYIG++PG +I ++R G N VMLLDE+DK G+ V GD
Sbjct: 398 EFVRVSMGGVHDEAEIRGHRRTYIGALPGNIIQAIRRAGTNNCVMLLDEVDKLGNGVHGD 457
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
P++ALLEVLDP QN TF D+YL VPFDLSKV+F+ TAN IP PL DR+E+I+LPGYT
Sbjct: 458 PSAALLEVLDPAQNSTFRDNYLAVPFDLSKVMFICTANNPDTIPGPLRDRLEMIQLPGYT 517
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
+EK +IA+R+LI R +++GL E I E + +I YTREAGVRNLER + ++ R
Sbjct: 518 EQEKTQIALRYLIKRQREENGLKPENCDITEGAIHDIIGNYTREAGVRNLERLIGSVFRN 577
Query: 547 AAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
A+K+AE +E+ S ++ LG+P+ ++ +A
Sbjct: 578 VAMKIAEGTEEKVTVDSAELPDILGAPIFESEIA-------------------------- 611
Query: 606 SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGEL 665
R + PGI+ GL WT GG++ F+EA+ + G L
Sbjct: 612 -------------------------MRSSMPGIATGLAWTPVGGDILFIEASRVAGNNRL 646
Query: 666 HLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSA 725
LTGQLGDV+KESAQ ALT V+ARATDL++ E LL +IH+H PAGA+PKDGPSA
Sbjct: 647 ILTGQLGDVMKESAQAALTLVKARATDLKINPE----LLDHSEIHVHVPAGAIPKDGPSA 702
Query: 726 GVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERN 785
GV + AL S+ K + +D AMTGE++LRGLVLPVGG+K+K+LAA R GIK V+LP RN
Sbjct: 703 GVAMFLALSSVMMNKPIASDHAMTGEISLRGLVLPVGGIKEKVLAALRAGIKTVMLPARN 762
Query: 786 LKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+DL ++P L+ + + ++D +
Sbjct: 763 KRDLDDIPEEARNQLKFVFLETVDDAIRSGL 793
>gi|376259996|ref|YP_005146716.1| ATP-dependent protease La [Clostridium sp. BNL1100]
gi|373943990|gb|AEY64911.1| ATP-dependent protease La [Clostridium sp. BNL1100]
Length = 780
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 326/738 (44%), Positives = 446/738 (60%), Gaps = 76/738 (10%)
Query: 96 ISSLEMTKIEMEQVEQDPDFIA------------LSRQFKATAMELISVLEQKQKTGGRT 143
I+ E+ KI V+ DP FIA + + +A L+S E K G+
Sbjct: 97 INRAEIKKI----VQDDPFFIAEVVETTIEEEDFVENEVEALKRRLVSAFEDYVKLSGKV 152
Query: 144 K-----VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIR 198
++E I +++DI + + E++ +L R+ K E++ + + +
Sbjct: 153 SPDTALSVVEISNISQVSDIIANNIPLKVEQKQAILSEFHPLRRVEKLLEILYQETEILE 212
Query: 199 VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIW 258
+ + I KV Q+ K QKE+ LR+QM+AI+ ELGD + ++ + K++SAG+P +
Sbjct: 213 IEKDINSKVRKQIDKLQKEYYLREQMKAIQTELGDREGVAGEVEEYKEKLKSAGLPEEVE 272
Query: 259 KHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGL 318
K VQKEL RL KM R YL+ I DLPW K+++E +DLK+A+E L+ DHYGL
Sbjct: 273 KKVQKELDRLLKMPQGSAEGGVIRTYLDWIFDLPWNKSTQE-HIDLKSAEEILEKDHYGL 331
Query: 319 VRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKD 378
+VK+RIIEYLAV+KLK +GP+LC VGPPGVGKTS+A SIA AL R ++RISLGGVKD
Sbjct: 332 TKVKERIIEYLAVQKLKNSLKGPILCLVGPPGVGKTSIAKSIAKALNRNYVRISLGGVKD 391
Query: 379 EADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPE 438
E++IRGHRRTY+GSMPGR+I LK+ G NP++LLDEIDK SD RGDPASA+LEVLD E
Sbjct: 392 ESEIRGHRRTYVGSMPGRIISALKQAGSNNPLILLDEIDKMSSDFRGDPASAMLEVLDAE 451
Query: 439 QNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHL 498
QN F DHY+ +PF+LS +F+ TAN IP PLLDRME+I L YT E+K IAM++L
Sbjct: 452 QNFAFRDHYMELPFNLSNSLFLTTANTLDTIPRPLLDRMEIINLSSYTEEDKANIAMKYL 511
Query: 499 IPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQ 558
+P+ + HGL ++ +++ E V+ +I YTREAGVRNLER + ++ R A KV E ++
Sbjct: 512 LPKQIKLHGLTAKSIRLDEGTVRDIINYYTREAGVRNLEREIGSVCRKVA-KVIVSESKK 570
Query: 559 ALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKV 618
+ + V+ LEK
Sbjct: 571 S------------------------------------------------VTVNRNNLEKF 582
Query: 619 LGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKES 678
LG RF A E+ GI+ GL WT GG+ +E M+G G+L LTG LGDV+KES
Sbjct: 583 LGVKRFRFDYAGEK-DEIGIATGLAWTPVGGDTLSIEVNLMQGNGKLELTGHLGDVMKES 641
Query: 679 AQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFS 738
A+ A++++R+R T+L++ + DIHIH P GA+PKDGPSAG+TL TA+VS S
Sbjct: 642 AKAAMSFIRSRCTELKI----DEKFHEKNDIHIHVPEGAIPKDGPSAGITLATAMVSALS 697
Query: 739 RKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLA 798
V AMTGE+TLRG VLP+GG+K+K+LAAHR GI+ +ILP N KD+ E+P V
Sbjct: 698 GLPVNRKVAMTGEITLRGRVLPIGGLKEKVLAAHRAGIETIILPVDNKKDIEEIPENVRQ 757
Query: 799 SLEIILAKRMEDVLEQAF 816
SL I A M+ VLE A
Sbjct: 758 SLNFICASDMQTVLENAL 775
>gi|404497395|ref|YP_006721501.1| ATP-dependent Lon protease (La) [Geobacter metallireducens GS-15]
gi|418066856|ref|ZP_12704213.1| ATP-dependent protease La [Geobacter metallireducens RCH3]
gi|78194996|gb|ABB32763.1| ATP-dependent Lon protease (La) [Geobacter metallireducens GS-15]
gi|373559845|gb|EHP86127.1| ATP-dependent protease La [Geobacter metallireducens RCH3]
Length = 774
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 304/651 (46%), Positives = 423/651 (64%), Gaps = 55/651 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ + +EQ +L+++D RL K + +Q ++V ++ +V ++ K
Sbjct: 164 RLADLVALYVNLPLDEQQQLLETIDPLERLKKVYMHLTSEVQRLQVKGEVQAEVTKRVGK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQKE+LLR+QM+ I+EELG+ D ++ L +K+ +AGMPS + K KEL+R++++ P
Sbjct: 224 SQKEYLLREQMKQIQEELGEEDTRAAEMTDLRKKIDAAGMPSEVRKVADKELKRVERINP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
P YT +R YL+ +A +PW+ A+ + + D+ A+ LD DHY L +VK+RI+EYLAVR
Sbjct: 284 ASPEYTVARTYLDYLAGMPWKNATRDNN-DINKAEAVLDEDHYNLKKVKERILEYLAVRT 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L+ +GP+LCFVGPPGVGKTSL SIA ALGRKFIR+SLGG++DEA+IRGHRRTYIG++
Sbjct: 343 LREKMKGPILCFVGPPGVGKTSLGKSIARALGRKFIRMSLGGMRDEAEIRGHRRTYIGAL 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I L R G NPV +LDE+DK G D RGDPASALLEVLDPEQN TF DHYL+VPFD
Sbjct: 403 PGRIIQELYRCGTNNPVFMLDEVDKIGLDFRGDPASALLEVLDPEQNNTFTDHYLDVPFD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+F+ TAN+ P+P L DRMEVI L GYT EEK +IA+R+L+PR ++++GL
Sbjct: 463 LSNVMFITTANQLDPVPAALKDRMEVIRLSGYTDEEKEKIAVRYLVPREVEENGLAKNPP 522
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ + +I+ YTREAGVRNL+RN+A++ R A ++ + G PL
Sbjct: 523 AFADEALFKIIRDYTREAGVRNLQRNIASVCRKVAKEITQ----------------GKPL 566
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
+ + A++E+ LGP F + A+E+
Sbjct: 567 RET---------------------------------ITPAVVEEFLGPRTFFNEVASEKD 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL WT GG++ FVEAT M+GKGEL LTG LGDV+KESA+ AL++VRA +
Sbjct: 594 RV-GVVTGLAWTETGGDIIFVEATRMKGKGELILTGSLGDVMKESARAALSFVRANGAEW 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ G DIHIH PAGA+PKDGPSAG+T+V A+VSL S + R D AMTGE++
Sbjct: 653 GV----GETAFADTDIHIHVPAGAIPKDGPSAGITMVIAIVSLLSVRPARRDVAMTGEIS 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIIL 804
L G VL +GG+K+K+LAA R G+K V+ P RN ++L ++P V + +
Sbjct: 709 LTGRVLAIGGLKEKVLAARRAGVKTVVAPARNRENLEDIPDDVKGEIAFVF 759
>gi|299135041|ref|ZP_07028232.1| ATP-dependent protease La [Afipia sp. 1NLS2]
gi|298590018|gb|EFI50222.1| ATP-dependent protease La [Afipia sp. 1NLS2]
Length = 807
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 339/793 (42%), Positives = 470/793 (59%), Gaps = 82/793 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + I+ G A L L ++ P G V V++EGL R V + S R
Sbjct: 62 TQKNASDDDPAADSIY--EIGTLASVLQL---LKLPDGTVK--VLVEGLERARVTKYSDR 114
Query: 89 GTYYTARISSL---EMTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRT 143
YY A +L + T +E E + + DF + + K + E++ V++Q
Sbjct: 115 TDYYEAEAVALADTDATSVEAEALGRSVVSDFESYVKLNKKISAEVVGVVQQ-------- 166
Query: 144 KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
KLAD + + ++ +L+++ + RL K L++ + ++V +KI
Sbjct: 167 -----ITDFAKLADTVASHLAVKIADRQDILETLSVSQRLEKVLGLMESEISVLQVEKKI 221
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
+V+ Q+ K+Q+E+ L +QM+AI++ELGD D+ D+L LE K+ + + Q
Sbjct: 222 RSRVKRQMEKTQREYYLNEQMKAIQKELGD-DEGRDELADLEEKIAKTKLSKEAREKAQH 280
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL++L++M P T R YL+ + +PW K S+ + DL AA+E LD+DHYGL +VK
Sbjct: 281 ELKKLRQMSPMSAEATVVRNYLDWLLSIPWGKKSK-VKKDLGAAQEILDADHYGLEKVKD 339
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
RI+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IR
Sbjct: 340 RIVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIR 399
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TF
Sbjct: 400 GHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTF 459
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
NDHYL V +DLS V+F+ TAN IP PL+DRMEVI + GYT EK+ IA +HLIP +
Sbjct: 460 NDHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEVIRIAGYTENEKVEIARKHLIPTAI 518
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+HGL S+ I +A + L+I+RYTREAGVRNLER L+ LAR A +E L S
Sbjct: 519 SKHGLSSKEFSIDDAALLLMIRRYTREAGVRNLERELSTLARKAV-------KELMLSSK 571
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPR 623
K + V EA++E++LG P+
Sbjct: 572 KSIK------------------------------------------VTEAVVEEMLGVPK 589
Query: 624 FDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIAL 683
F E E G+ GL WT+ GGE+ +E+ M GKG + +TG L DV+KES A
Sbjct: 590 FRYGE-IENEDQVGVVTGLAWTDVGGELLTIESVMMPGKGRMTVTGNLRDVMKESISAAA 648
Query: 684 TWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVR 743
++VR+RA + + L + RDIH+H P GA PKDGPSAGV + T +VS+ + +R
Sbjct: 649 SYVRSRAINYGIEPP----LFEKRDIHVHVPEGATPKDGPSAGVAMATTIVSVLTGIPIR 704
Query: 744 ADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEII 803
D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V +PE N KDL E+ A+ +EII
Sbjct: 705 HDVAMTGEITLRGRVLPIGGLKEKLLAAGRGGIKTVFIPEDNAKDLTEISDAIKGGMEII 764
Query: 804 LAKRMEDVLEQAF 816
RM++VL +A
Sbjct: 765 PVSRMDEVLSRAL 777
>gi|163846381|ref|YP_001634425.1| ATP-dependent protease La [Chloroflexus aurantiacus J-10-fl]
gi|222524147|ref|YP_002568618.1| ATP-dependent protease La [Chloroflexus sp. Y-400-fl]
gi|302425041|sp|A9WGB5.1|LON_CHLAA RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|163667670|gb|ABY34036.1| ATP-dependent protease La [Chloroflexus aurantiacus J-10-fl]
gi|222448026|gb|ACM52292.1| ATP-dependent protease La [Chloroflexus sp. Y-400-fl]
Length = 827
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 340/780 (43%), Positives = 467/780 (59%), Gaps = 76/780 (9%)
Query: 47 NRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEM 106
N GV AR L SG VV+ GL R + E Y R +
Sbjct: 91 NVGVVARIEQLGTLPNGASG-----VVVRGLVRAVLGEAVQTTPYLRFRFTR------RP 139
Query: 107 EQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETV--PIHKLADIFVASFE 164
+ E+ P+ L + A + +VLE + + + ++ P H LAD S +
Sbjct: 140 DVFERTPELEQLMVEVHAA---IDAVLELRPGVTQEIRNFVRSIDDPGH-LADNTGYSPD 195
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+F E+ +L++ D+ RL K + + V K+ Q+V+ ++ Q+EF LRQQ+
Sbjct: 196 YTFAERQELLETFDVSERLRKVLMFYRKQFALLEVQAKLRQEVQESAARQQREFYLRQQL 255
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
RAI++ELG++ + +L L +K+ +A +P K +EL RL ++ P Y R Y
Sbjct: 256 RAIQKELGEDTSEAAELDDLRQKLAAADLPEVARKEADRELSRLARINASSPEYQMVRTY 315
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD------- 337
LE +A+LPW K + + +D+ A++ LD DH+GL +VK+RI+EYLAV++ +
Sbjct: 316 LEWLAELPWNKYTGQ-PIDIAFARQVLDEDHHGLQKVKERILEYLAVKQRRAALGEENLR 374
Query: 338 -ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGR 396
R P+L FVGPPGVGKTSL SIA ALGR F+R+SLGGV+DEA++RG RRTYIGS PGR
Sbjct: 375 ANREPILAFVGPPGVGKTSLGQSIARALGRSFVRMSLGGVRDEAELRGFRRTYIGSQPGR 434
Query: 397 LIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 456
+I L+R G +PV+LLDEIDK G D RGDPA+ALLEVLDPEQN TF DHYLN+PFDLS+
Sbjct: 435 IIQELRRAGTADPVILLDEIDKLGIDYRGDPAAALLEVLDPEQNHTFTDHYLNLPFDLSR 494
Query: 457 VIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIP 516
V+F+ATAN +PP L DRMEVIEL GY +EK++IA HL+PR L +GL E +
Sbjct: 495 VLFLATANTWDTVPPALRDRMEVIELSGYIEDEKVQIAQIHLVPRQLRANGLRPEEAVVT 554
Query: 517 EAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDN 576
E ++ +I YTREAGVRNLER++ A+ R A +++E E + A
Sbjct: 555 EDAIRCIINEYTREAGVRNLERSIGAVLRKVARRLSEGEIDPA----------------- 597
Query: 577 RLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAP 636
+P VVD A + LG PRF + E ER+ P
Sbjct: 598 ----------------------------NTPFVVDAAFVRAALGRPRFTN-ETRERIDQP 628
Query: 637 GISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLV 696
G+++GLVWT GG++ FVEA+A+ GK EL +TGQLG+V++ESA+ ALT+VR+RA L +
Sbjct: 629 GVAIGLVWTPVGGDIIFVEASAVEGKKELTITGQLGEVMRESAEAALTYVRSRARSLGIE 688
Query: 697 AEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRG 756
+ + IHIH PAGAVPKDGPSAG+T+ TAL S + + VR D AMTGE++LRG
Sbjct: 689 P----DFFETHAIHIHVPAGAVPKDGPSAGITMATALASAATGRLVRDDIAMTGEISLRG 744
Query: 757 LVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
VLP+GG+K+K L AHR GI+ VILP RNL DL ++P AV A + I +++VL A
Sbjct: 745 RVLPIGGIKEKALGAHRAGIRTVILPRRNLIDLDDLPPAVSAEMTFIPVDTLDEVLSIAL 804
>gi|366166321|ref|ZP_09466076.1| Lon-A peptidase [Acetivibrio cellulolyticus CD2]
Length = 811
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 322/750 (42%), Positives = 459/750 (61%), Gaps = 71/750 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R + E + ++ A + + KI ++ E + AL R+ +IS
Sbjct: 92 VLVEGISRAEISEFTQTEPFFMAEV----VEKIYVDDEESKVEVEALKRR-------VIS 140
Query: 132 VLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
E+ K + + +L + I +L+DI ++ + E++ +L+ KVRL K
Sbjct: 141 TFEEYSKFNNKISPETVLSVMSIDDADQLSDIITSNLSLKVEQKQEILNEFQPKVRLEKL 200
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
E++ + + +++ + I KV Q+ K QKE+ LR+Q++AI+ ELGD + ++ +R
Sbjct: 201 LEIIVKEIDIMQIEKDINIKVRKQMDKMQKEYYLREQLKAIQNELGDKEGITGEVEEYKR 260
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K++ I K V KEL RL KM + R YL+ I DLPW K ++EI +DL+
Sbjct: 261 KLKEGNFCEEIEKKVLKELDRLLKMPSGSAEGSVIRTYLDWIFDLPWNKKTDEI-IDLER 319
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A+ LD DHYGL +VK+RIIEYLA+RKLK D +GP+LC VGPPGVGKTS+A SIA AL R
Sbjct: 320 AETILDEDHYGLEKVKERIIEYLAIRKLKNDLKGPILCLVGPPGVGKTSIAKSIAKALNR 379
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
++R+SLGGV+DEA+IRGHRRTY+G+MPGR+I LK+ NP++LLDEIDK +D RGD
Sbjct: 380 NYVRMSLGGVRDEAEIRGHRRTYVGAMPGRIIAALKQADSKNPLILLDEIDKMSNDFRGD 439
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
PASA+LEVLD EQN F DHY+ +PFDLS V+F+ TAN IP PLLDRMEVI L YT
Sbjct: 440 PASAMLEVLDGEQNFAFRDHYMELPFDLSDVLFLTTANSLDTIPRPLLDRMEVISLTSYT 499
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EEK+ I+ R+L P+ ++ HGL E +++ E V+ +I YTREAGVRNLER +A + R
Sbjct: 500 EEEKVNISTRYLFPKQIEAHGLKKESVKVDEQAVRDIINCYTREAGVRNLERQIATVCRK 559
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS 606
A K+ +Q ++ +ITS
Sbjct: 560 VAKKLVSSKQ-------------------------------------------HSIKITS 576
Query: 607 PLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELH 666
A LEK LG ++ +A E+ GI+ GL WT GG+ +E M G G+L
Sbjct: 577 ------ANLEKFLGTKKYRYDKANEKDDV-GIATGLAWTPVGGDTLSIEVNLMEGSGKLE 629
Query: 667 LTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAG 726
LTGQLGDV+KESA+ A++++R++A + ++ +D DIHIH P GA+PKDGPSAG
Sbjct: 630 LTGQLGDVMKESARAAMSFIRSKAQEY-MIEKD---FYSKYDIHIHVPEGAIPKDGPSAG 685
Query: 727 VTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNL 786
+TL TA+VS + V+ + AMTGE+TLRG VLP+GG+K+K+LAAHR GI +I+P N
Sbjct: 686 ITLATAMVSALTGIPVKRNVAMTGEITLRGRVLPIGGLKEKVLAAHRAGIDTIIIPFENK 745
Query: 787 KDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
KDL ++P V ++ ++A+ M+ VL A
Sbjct: 746 KDLEDIPEVVRKKIKFVIAEGMDTVLNTAL 775
>gi|406918851|gb|EKD57320.1| hypothetical protein ACD_57C00344G0002 [uncultured bacterium]
Length = 806
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 331/756 (43%), Positives = 448/756 (59%), Gaps = 87/756 (11%)
Query: 70 YIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMEL 129
Y + +EGL R ++E S Y R+ + + E++E AL R
Sbjct: 92 YNLAVEGLSRVYLKEFSQIDPYLAVRVEEIPELAQKTEEIE------ALFR--------- 136
Query: 130 ISVLEQKQKTGGRTKVLLETVPIH--------KLADIFVASFEISFEEQLVMLDSVDLKV 181
++L + +K G VL IH +L +I AS ++ +++ +L+ VD K
Sbjct: 137 -NILNKIKKYGELGGVLTLESSIHIFSTDDPNQLVNIISASIDLKTQDKQQILEMVDTKA 195
Query: 182 RLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDL 241
RL + +EL+ R ++ + ++ KI + + ++ K KE +LR++M++I++ELG+ D+D ++
Sbjct: 196 RLERLSELLSREIRILEISSKIDTETQERVGKVTKEAILREKMKSIEKELGE-DEDGREI 254
Query: 242 VALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW---EKASE 298
RK++ A MP + +EL RL KM P + R YLE + DLPW K S
Sbjct: 255 TEFRRKIKEAAMPQEVKNKADRELVRLAKMSSYNPESSYLRTYLEWLVDLPWVVKNKKSA 314
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++D K L+ DHYGL +VK+RI+EYLAV KL +GP+LCFVGPPGVGKTS+
Sbjct: 315 DVDFAAKV----LEEDHYGLPKVKERILEYLAVHKLVGKIKGPILCFVGPPGVGKTSIGK 370
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA AL KFIR+SLGG+ DEA+IRGHRRTY+G++PGR+I G+K G NPV +LDEIDK
Sbjct: 371 SIARALDHKFIRVSLGGIHDEAEIRGHRRTYVGALPGRIIQGIKNAGTKNPVFMLDEIDK 430
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
G+D RGDP+SALLE LDPEQN F+DHYL VP+DLS V+F+ TAN IPP L DR+E
Sbjct: 431 VGTDFRGDPSSALLEALDPEQNNAFSDHYLEVPYDLSDVMFITTANVLDTIPPALRDRLE 490
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI PGYT EEK IA R L P+ + HGL E ++I +A +K +I RYTREAGVR LER
Sbjct: 491 VISFPGYTEEEKFHIAKRFLKPKQFEAHGLAKEKVEISDAAIKEIISRYTREAGVRELER 550
Query: 539 NLAALARAAAVKVAEQEQEQALP-SSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHE 597
+AA+ R A K A +++ + S K +H
Sbjct: 551 EIAAILRKVAKKFASNNKQKKIKVSPKQLH------------------------------ 580
Query: 598 VSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEAT 657
LGP +F + AE G+S GL T GGE+ FVE T
Sbjct: 581 -------------------SYLGPFKF-SKTIAETKDEVGMSTGLSVTPAGGEILFVEVT 620
Query: 658 AMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGA 717
M GKG L LTGQLGDV+KESAQ AL++V++RA V G N DIHIH P GA
Sbjct: 621 LMPGKGHLILTGQLGDVMKESAQAALSYVKSRAK----VVGVGDNFFAKCDIHIHVPEGA 676
Query: 718 VPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIK 777
VPK+GPSAG+ + TALVS ++ VR MTGE+TLRG VL +GGVK+K+LAAHR G+
Sbjct: 677 VPKEGPSAGIAITTALVSAVTKIAVRRGVGMTGEVTLRGRVLEIGGVKEKVLAAHRAGLT 736
Query: 778 RVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
+ILP+ N KDL E+P V L+ IL + M++VL+
Sbjct: 737 TIILPKANAKDLEEIPKNVRRDLQFILTEHMDEVLK 772
>gi|374583394|ref|ZP_09656488.1| ATP-dependent protease La [Desulfosporosinus youngiae DSM 17734]
gi|374419476|gb|EHQ91911.1| ATP-dependent protease La [Desulfosporosinus youngiae DSM 17734]
Length = 810
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 332/763 (43%), Positives = 462/763 (60%), Gaps = 84/763 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EG+ R + E Y+ RI E++ +D A++ + +
Sbjct: 85 PGG--TMRVLVEGISRGRILEYIEEDNYFRVRI----------EEIAEDKK--AMTPELE 130
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPI-------HKLADIFVASFEISFEEQLVMLDS 176
+ E+ K G R + LET+ +LADI + + ++ +L++
Sbjct: 131 TLVRGMTHQFEEYAKLGKR--IPLETIGTVLAVEEPGQLADIAASHLSLKVPDKQTILEA 188
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+ +++R+ + TEL+ R ++ + + +I Q+V Q+ K+QKE+ LR+QM+AI++ELGD D+
Sbjct: 189 ISIELRVERLTELIMREIELLELERRIGQRVRKQMDKAQKEYYLREQMKAIQKELGDKDE 248
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+ + K+ A +P + + KE+ RL+KM P T R YL+ + LPW K
Sbjct: 249 RQAEADEYREKVAKAKIPKEVEEKAFKEIDRLEKMPPHSAEGTVVRTYLDWLLVLPWTKT 308
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
S + +DL ++E L+ DHYGL ++K+RI+E+LA+RKL P + P+LC VGPPGVGKTSL
Sbjct: 309 SRD-KIDLVRSEEILNEDHYGLEKIKERILEFLAIRKLTPKMKSPILCLVGPPGVGKTSL 367
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
A SI+ +L RKF+R+SLGG++DEA+IRGHRRTYIG++PGR+I G++ G NPV LLDEI
Sbjct: 368 AKSISRSLNRKFVRMSLGGLRDEAEIRGHRRTYIGALPGRIIQGMRTAGTRNPVFLLDEI 427
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK SD RGDPASALLEVLDPEQN TF DHYL VPFDLS+ +FV TAN IP PLLDR
Sbjct: 428 DKMASDFRGDPASALLEVLDPEQNNTFTDHYLEVPFDLSQSLFVLTANTLHTIPRPLLDR 487
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVI L GYT +EK+ IA R+L+P+ ++ HGL + + E ++ ++Q YTRE+GVR L
Sbjct: 488 MEVITLSGYTEDEKVNIASRYLVPKQMEAHGLNKDIFTLEEDVLLKLVQGYTRESGVRGL 547
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGEST 595
ER +A L R AV+ ++E E + +D+H LG+P
Sbjct: 548 ERQVANLCRKIAVRWVKKEWEPHTVTVEDLHSALGAP----------------------- 584
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAP--GISVGLVWTNFGGEVQF 653
R+ + AA+ AP G GL +T GG V
Sbjct: 585 ---------------------------RYHFQGAAK---APEIGAVTGLAYTEVGGVVLT 614
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
VE T + GKG L LTGQLGDV+KESAQ A T++RA A L + ED D+HIH
Sbjct: 615 VEVTPLPGKGRLTLTGQLGDVMKESAQAAWTFIRAYARQLG-IEED---FYDRTDLHIHV 670
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAGVT+ TA+ S +++ R+D AMTGE+TLRG VLP+GGVK+K+LAAHR
Sbjct: 671 PEGATPKDGPSAGVTMATAMASAIAKRAARSDLAMTGEITLRGNVLPIGGVKEKVLAAHR 730
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GIK V+LPE N KDL ++P V LE R+E+VL+ A
Sbjct: 731 AGIKVVLLPEENRKDLEDIPENVRKVLEFHFVSRIEEVLKLAL 773
>gi|408418820|ref|YP_006760234.1| ATP-dependent protease La Lon3 [Desulfobacula toluolica Tol2]
gi|405106033|emb|CCK79530.1| Lon3: ATP-dependent protease La [Desulfobacula toluolica Tol2]
Length = 809
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/761 (41%), Positives = 468/761 (61%), Gaps = 63/761 (8%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFI 116
+ + ++ P GR+ +V +G+ + + E + T++ RI L +++ VE +
Sbjct: 92 IQKMIKLPDGRIKALV--QGIAKAKILEYVKKRTFFKVRIEFL----TDVDPVELSIENE 145
Query: 117 ALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
AL R K + +L+++ + + +G +L KLAD+ ++ + E+ ++L+
Sbjct: 146 ALMRNVKEASEKLLAL--KGEFSGDVGDLLSHIESPGKLADLVASNLNLKVEDAQILLEI 203
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+ RL K +L+ R L V KI V+ ++SK+Q+++ LR+Q++AI ELG+ND+
Sbjct: 204 TEGTERLKKVNDLLARELDLSTVQAKIQIDVKDEISKNQRDYYLREQVKAIHRELGENDE 263
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
++ + K++ MP + K QK+L+RL++M + R YL+ I DLPW KA
Sbjct: 264 KLAEIEEFKEKIKKCKMPHDCEKESQKQLKRLEQMHSDSSEASVVRTYLDCIVDLPWSKA 323
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
+++ LD+ ++E LD++H+GL +VK+RI+EYL+VRKL P +G ++CFVGPPGVGKTSL
Sbjct: 324 TKDF-LDIPKSQEVLDANHFGLDKVKERILEYLSVRKLNPQKKGQIICFVGPPGVGKTSL 382
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
+IA A+ RKF R+SLGG++DEA+IRGHRRTYIGSMPGR++ GL++ G NPV +LDEI
Sbjct: 383 GQAIAKAMKRKFHRLSLGGIRDEAEIRGHRRTYIGSMPGRILQGLRQCGTNNPVFMLDEI 442
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK G+D RGDP+SALLE LDPEQN F+DHYLN+PFDLS V+F+ TAN + IP LLDR
Sbjct: 443 DKLGNDFRGDPSSALLEALDPEQNFEFSDHYLNMPFDLSNVLFILTANMSDTIPSALLDR 502
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVI + GYT +EK IA +HL+PR L +GL + + A ++L+I YT EAGVR L
Sbjct: 503 MEVIRISGYTRQEKKVIAQKHLLPRKLKDNGLIRRSIHVSSAAMELIIAEYTLEAGVRGL 562
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER L A+ R K+A Q +ADG +
Sbjct: 563 ERKLDAICR----KIARQ-----------------------IADGKK------------- 582
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
F IT L K LGPP++ E + + G++ GL WT GGE ++E
Sbjct: 583 ---GKFSIT------RQNLTKYLGPPQY-LTELDQEESQVGLATGLAWTEVGGEQLYIEV 632
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ +GKGEL +TGQ+GDV++ESA+ ALT+ +A A + + ED + DIHIH PAG
Sbjct: 633 SLYQGKGELLVTGQIGDVMQESARAALTYTKANADNFGINKED----IDNNDIHIHVPAG 688
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A+PKDGPSAG+ + TAL+S F+ ++V MTGE++LRG VLP+GG+K+K L A R GI
Sbjct: 689 AIPKDGPSAGIAMATALISAFTGRKVNNKVGMTGEISLRGRVLPIGGLKEKALGALRAGI 748
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE+N KDL ++P + ++ + +VL+ A E
Sbjct: 749 DHVIIPEKNKKDLYDMPKVIKNKMKFTCVSDIREVLDIALE 789
>gi|347529588|ref|YP_004836336.1| ATP-dependent protease La [Sphingobium sp. SYK-6]
gi|345138270|dbj|BAK67879.1| ATP-dependent protease La [Sphingobium sp. SYK-6]
Length = 801
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 320/758 (42%), Positives = 464/758 (61%), Gaps = 69/758 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T+ ++L+G RF V E + AR++ + + + ++E I L RQ A+E
Sbjct: 107 THHLILQGETRFRVVEFLEGWPFLVARVARVAEPESDAPEIEAR--IINLRRQ----ALE 160
Query: 129 LISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATE 188
+ +L Q + G + LAD A ++ +E+ +L++V L VRL K +
Sbjct: 161 TVELLPQAPQ--GLGDAIRNIGSASTLADTVAAYLDMGADEKQEILETVALDVRLDKVSR 218
Query: 189 LVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKM 248
+ + LQ +R++ +I + V+ L Q+E LLR+QM AI+ +LG++D ++ + K+
Sbjct: 219 ALAQRLQVLRLSAEIGRDVQETLGSRQREALLREQMAAIQRQLGEDDGKAAEVAEISEKI 278
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAK 308
+ AGMP+++ +KELRRL+ + R YL+ + +LPW+ EE +D+ A+
Sbjct: 279 EKAGMPADVEAQARKELRRLESTPDGAAEHGIIRTYLDWLTELPWQ-LPEEKPIDIAQAR 337
Query: 309 ERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF 368
LD+DHYGL ++K+RI+EYLAVRKL P+ + P+LCFVGPPGVGKTSL SIA A+GR F
Sbjct: 338 AVLDADHYGLEKIKRRIVEYLAVRKLAPEGKAPILCFVGPPGVGKTSLGQSIARAMGRPF 397
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
+R+SLGGV DEA+IRGHRRTYIG++PG +I +++ G + VM+LDEIDK G + GDP+
Sbjct: 398 VRVSLGGVHDEAEIRGHRRTYIGALPGNIIQAIRKAGTRDCVMMLDEIDKLGQGMHGDPS 457
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
+A+LEVLDPEQN TF D+YL +PFDLS+V+F+ATAN IP PL DRME+I L GYT E
Sbjct: 458 AAMLEVLDPEQNGTFRDNYLALPFDLSRVVFIATANMLDSIPGPLRDRMEIISLAGYTEE 517
Query: 489 EKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA 548
EKL IA R+L+ R L+ +G+ +E + + +A+++ +I+ YTREAGVRNLER + R AA
Sbjct: 518 EKLAIARRYLVRRQLEANGVTAEQVTVSDAVLEAIIRFYTREAGVRNLEREIGKTIRHAA 577
Query: 549 VKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSP 607
V++AE + D+ LG + +N +A
Sbjct: 578 VRIAEGTASHVDITPDDLQEILGGRIFENEVA---------------------------- 609
Query: 608 LVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHL 667
+R + PG++ G+ WT GG++ F+EAT M G G L L
Sbjct: 610 -----------------------QRTSVPGVATGMAWTPVGGDILFIEATMMPGNGRLIL 646
Query: 668 TGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGV 727
TGQLGDV+KES Q AL+ V++RA L + E + D+H+H PAGA PKDGPSAGV
Sbjct: 647 TGQLGDVMKESVQAALSLVKSRADALGIARE----TFEKNDVHVHVPAGATPKDGPSAGV 702
Query: 728 TLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLK 787
+ AL SLF+ + VR+DT+MTGE++LRGLVLPVGG+K+K++AA GI RV+LP RN +
Sbjct: 703 AMFLALTSLFTGRTVRSDTSMTGEISLRGLVLPVGGIKEKVVAAAGAGITRVMLPARNRR 762
Query: 788 DLVEVPAAVLASLEIILAKRMEDV----LEQAFEGGCP 821
D ++P + LE I + +ED LE+ E G P
Sbjct: 763 DFDDIPVSARDKLEFIWLETVEDALAAGLEEEPEAGAP 800
>gi|430743975|ref|YP_007203104.1| ATP-dependent protease La [Singulisphaera acidiphila DSM 18658]
gi|430015695|gb|AGA27409.1| ATP-dependent protease La [Singulisphaera acidiphila DSM 18658]
Length = 810
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 330/746 (44%), Positives = 469/746 (62%), Gaps = 65/746 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+V +GL R + ++ Y +I + + E VE D ++R F+
Sbjct: 85 IVCQGLYRAKLTKVEQLEPYLIGQIEPYD--DVVDEGVELDALVHHVNRLFQ-------R 135
Query: 132 VLEQKQKTGGRTKVL-LETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+++Q Q+ +V + T +LAD+ +S S EE+ +L +D++ RL K + +
Sbjct: 136 MVDQSQQVPEELQVAAMNTREPGRLADLLGSSLPFSIEEKQKLLSEIDVRARLEKLGQFL 195
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
R L + ++ KI ++V +++K+Q++ LRQQ++AI+EELG+ + D +L L +++++
Sbjct: 196 SRQLAVLELSSKIQEQVGSEITKAQRDHFLRQQIKAIQEELGEGEGDNPELDELWKRLKA 255
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
A P ++ ++E+ RL M P Y+ R YL+ +A LPW K+S + LDL+ AK+
Sbjct: 256 ANPPEDVLTEAEREIERLAGMHPSSAEYSIVRTYLDWMAMLPWSKSSRD-RLDLRRAKKV 314
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD+DHY L ++K+RI+EYLAVRKLK D +GP+LC GPPG GKTSL SIA ALGR+F+R
Sbjct: 315 LDTDHYDLEKIKERILEYLAVRKLKKDMKGPILCLAGPPGTGKTSLGKSIAKALGREFVR 374
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
ISLGGV DEA+IRGHRRTY+ +MPGR++ G+++ G NPV +LDE+DK GSD RGDP++A
Sbjct: 375 ISLGGVHDEAEIRGHRRTYVAAMPGRILQGIRKGGTNNPVFMLDEVDKLGSDFRGDPSAA 434
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDPEQN +F DHYL+V FDLSKV+F+ATAN + IP PLLDRMEV++LPGY+ EEK
Sbjct: 435 LLEVLDPEQNASFRDHYLDVDFDLSKVMFIATANMLETIPAPLLDRMEVLQLPGYSEEEK 494
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
IA +++IP+ L+ HGL + + + V +I YTREAG+RNLER +A++ R A K
Sbjct: 495 TLIAQKYIIPKQLEAHGLAAGDVVFSDEAVGKIIADYTREAGLRNLEREIASICRKVARK 554
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
ADG +V SP V
Sbjct: 555 ---------------------------RADGKRGLTKV-----------------SPTQV 570
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
EA LGPPR+ RE A+R PG++ GL WT GGE+ F+EATAM GKG L LTG
Sbjct: 571 PEA-----LGPPRY-FREVADRTGTPGVATGLAWTPTGGEILFIEATAMPGKGGLTLTGL 624
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LG+ ++ESAQ A++++R+ A L++ A + D+HIH PAGAVPKDGPSAGV +
Sbjct: 625 LGESMRESAQAAMSYMRSHAKLLEIEA----SWFTKNDVHIHVPAGAVPKDGPSAGVAIS 680
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
AL+SL +K + + AMTGE+TL G VLPVGGV++KILAA R GI V++P N KDL+
Sbjct: 681 AALMSLVRKKAIHQNLAMTGEVTLTGRVLPVGGVREKILAARRAGILAVLIPRHNEKDLI 740
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAF 816
E+PA V A + ++DV+ + F
Sbjct: 741 ELPAEVKADMTFHSVDTLDDVVPRLF 766
>gi|322436229|ref|YP_004218441.1| ATP-dependent protease La [Granulicella tundricola MP5ACTX9]
gi|321163956|gb|ADW69661.1| ATP-dependent protease La [Granulicella tundricola MP5ACTX9]
Length = 816
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 333/755 (44%), Positives = 462/755 (61%), Gaps = 72/755 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
+ V EG R + E + + TA L +++E E+ P+ AL R
Sbjct: 105 SLFVFTEGNERVRLGEFTQLMPFMTAEYEIL--SEVEPEKT---PELEALQRN------- 152
Query: 129 LISVLEQKQKTGGRTKVLLETVPIH-----KLADIFVASFE-ISFEEQLVMLDSVDLKVR 182
++S +Q + L+T+ I+ +LAD +S ++ ++ +L++ + R
Sbjct: 153 VVSQFQQIVTSSPTLSDDLQTIAINIDEPGRLADFIASSLPFLTTTDKQELLETSSVSAR 212
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L + + + + L+ ++ KI +V+ + +SQ+++ LR+QM+AI++ELGD DD + D+
Sbjct: 213 LERVNKHLAKELEVQQLRNKIQSEVQDSVQQSQRDYYLREQMKAIQKELGDLDDTQKDIA 272
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
L+ K+++AGMP K KEL RL +M P Y+ +R Y+E +A LPW K S ++
Sbjct: 273 ELKEKIENAGMPEETQKDALKELARLSRMNPAAADYSLTRNYVEWLAVLPWAKTSSG-EV 331
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
D+ AK LD DHYGL +VK RI++YL+VR+LKPD +GP+LCFVGPPGVGKTSL SIA
Sbjct: 332 DILKAKAFLDEDHYGLKKVKDRILDYLSVRRLKPDMKGPILCFVGPPGVGKTSLGKSIAR 391
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
AL RKF RISLGG+ DEA+IRGHRRTYIG++PG++I LKRV V +PV +LDEIDK G D
Sbjct: 392 ALDRKFSRISLGGMHDEAEIRGHRRTYIGALPGQIIQHLKRVEVKDPVFMLDEIDKLGRD 451
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
RGDPASALLE LDPEQN TF D+YL+ PFDLSKV+F+ TAN+ IP PLLDRME+IEL
Sbjct: 452 FRGDPASALLETLDPEQNNTFRDNYLDQPFDLSKVLFICTANQLDTIPGPLLDRMEIIEL 511
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GYT EEK+ IA ++LIPR + ++G+ + ++ P+ V LV + YTREAGVR LE+ +
Sbjct: 512 TGYTEEEKVAIAQKYLIPRQIKENGVPDDMMEFPQESVALVARHYTREAGVRKLEQQIGT 571
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
+ R A K+AE E+ + + + +H G +V +
Sbjct: 572 VCRKLARKIAEGRTEKLVITPEIIH---------EFLGGIKVRV---------------- 606
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
D E AER G+ VGL WT GG++ F+EA M+GK
Sbjct: 607 -----------------------DTEIAERTKRAGVVVGLAWTPAGGDILFIEANKMKGK 643
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
G ++TGQ+GDV+KES Q ALTWVR+ A L L + +L D+HIH PAGA+PKDG
Sbjct: 644 GGFNITGQIGDVMKESMQAALTWVRSNAIGLGLDEDFTKDL----DLHIHVPAGAIPKDG 699
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAGVT+ TALVSL + K VR AMTGE+TL G VLPVGG+K+K LAA R G++ VILP
Sbjct: 700 PSAGVTMATALVSLLTDKPVRPLLAMTGEITLSGDVLPVGGIKEKFLAAKRAGVRDVILP 759
Query: 783 ERNLKDLVE-VPAAVLASLEIILAKRMEDVLEQAF 816
+ + E + + I A+R+EDVL A
Sbjct: 760 VDCKQQVDEDLTPDQTEGITIHYARRIEDVLAVAL 794
>gi|304316362|ref|YP_003851507.1| ATP-dependent protease La [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777864|gb|ADL68423.1| ATP-dependent protease La [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 788
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 462/755 (61%), Gaps = 77/755 (10%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R ++ L + +++ + + KI+ ++++D + AL R + E IS
Sbjct: 86 VLVEGISRAELKNLISSESFFEVEV----IEKIDNTEIQKDSELEALMRSVTSAFEEYIS 141
Query: 132 VLEQKQKTGGRTKVLLETV-------PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLS 184
+ +K+ L+++ +LAD+ ++ + +L+ D K RL
Sbjct: 142 I---------SSKIPLDSIYNVVSVEEPGRLADVITEHLSLNQSQNQELLECFDTKERLE 192
Query: 185 KATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVAL 244
K + + L + + +KI +V Q+ KSQ+E+ LR+Q++AIK ELG++D+ + ++
Sbjct: 193 KLLGFILKELDILEIEKKINMRVHKQIDKSQREYYLREQLKAIKAELGESDEIDQEIDEY 252
Query: 245 ERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDL 304
E K++S +P + + ++ELRRL +M P + R Y++ + DLPW + ++++ LDL
Sbjct: 253 EEKIESKDLPDYVKEKAKEELRRLSRMGPGSAEGSVVRTYIDWLLDLPWNEETKDV-LDL 311
Query: 305 KAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASAL 364
K A++ L+ DHYGL +VK+RI+E+LAVR + P+LC VGPPGVGKTSL SIA A+
Sbjct: 312 KRAEKILNEDHYGLKKVKERILEFLAVRSYHEKMKSPILCLVGPPGVGKTSLGKSIARAM 371
Query: 365 GRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVR 424
RKF+R+SLGGV+DEA+IRGHRRTY+G++PG +I+ LK G NPV LLDEIDK SD R
Sbjct: 372 NRKFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSLKIAGSKNPVFLLDEIDKMSSDFR 431
Query: 425 GDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPG 484
GDPASA+LEVLDPEQN T+ DHY+++PFDLS+V+F+ TAN IP PLLDRMEVI + G
Sbjct: 432 GDPASAMLEVLDPEQNSTYRDHYIDLPFDLSRVLFITTANTLDTIPAPLLDRMEVIYISG 491
Query: 485 YTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALA 544
YT EEKL IA HL+P++L +HG E ++I ++ + +I YTREAGVR LE+N+A +
Sbjct: 492 YTEEEKLHIAKEHLVPKILKEHGATDEIIKIQDSAIIGIISEYTREAGVRALEQNIAKVV 551
Query: 545 RAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R + + E + + +++ + LG PL FR
Sbjct: 552 RKSIKTIVEDKAKSIKVGKQNLQKYLGKPL----------------------------FR 583
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
I D+A L+ + G+ GL WT GG+ VEAT M G G
Sbjct: 584 I------DKANLQNKV-----------------GMVTGLAWTRVGGDTLTVEATTMPGTG 620
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTGQLGDV+KESAQ +++R+ A L + + NL DIHIH P GA+PKDGP
Sbjct: 621 KLTLTGQLGDVMKESAQAGFSYIRSNADTLGINKDFYKNL----DIHIHVPEGAIPKDGP 676
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+VTA+VS + VR D AMTGE+TL G VLP+GG+K+K+LAAHR GI ++I P
Sbjct: 677 SAGITMVTAMVSAIKKVPVRGDIAMTGEITLTGKVLPIGGLKEKVLAAHRAGILKIIAPA 736
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N +DL E+P +V LE +++VL+ + G
Sbjct: 737 DNKRDLDEIPQSVKKKLEFKFVSNIDEVLKISLVG 771
>gi|402574573|ref|YP_006623916.1| ATP-dependent proteinase [Desulfosporosinus meridiei DSM 13257]
gi|402255770|gb|AFQ46045.1| ATP-dependent proteinase [Desulfosporosinus meridiei DSM 13257]
Length = 805
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/663 (47%), Positives = 424/663 (63%), Gaps = 55/663 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LADI + + ++ +L+++ +++RL + TEL+ R ++ + + +I Q+V Q+ K
Sbjct: 161 RLADIVASHLNLKVPDKQTILEAMSVELRLERLTELIMREIELLELERRIGQRVRKQMDK 220
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+ LR+Q++AI++ELGD D+ + + K+ A P + + KE+ RL+KM P
Sbjct: 221 AQKEYYLREQIKAIQKELGDKDERQAEADEYREKIAKAKCPKEVEEKALKEIERLEKMPP 280
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R YL+ + LPW K+S + +DL ++E L+ DHYGL +VK+RI+E+LA+RK
Sbjct: 281 SSAEGTVVRTYLDWLLVLPWTKSSRD-KIDLTRSEEILNQDHYGLEKVKERILEFLAIRK 339
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L P + P+LC VGPPGVGKTSLA SI+ +L RKF+R+SLGG++DEA+IRGHRRTYIG++
Sbjct: 340 LTPKMKSPILCLVGPPGVGKTSLAKSISRSLNRKFVRMSLGGLRDEAEIRGHRRTYIGAL 399
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I G++ G NPV LLDEIDK SD RGDPASALLEVLDPEQN TF DHYL VPFD
Sbjct: 400 PGRIIQGVRTAGTRNPVFLLDEIDKMSSDFRGDPASALLEVLDPEQNSTFTDHYLEVPFD 459
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS+ +FV TAN IP PLLDRME+I + GYT +EKL IA R+L+P+ L+ HGL +
Sbjct: 460 LSQTLFVLTANTLHTIPRPLLDRMEIINISGYTEDEKLNIASRYLVPKQLEAHGLSKDVF 519
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ + ++ ++Q YTRE+GVR LER +A L R AV+ +QE E + +D+
Sbjct: 520 TLEDDVLLKLLQGYTRESGVRGLERQVANLCRKIAVRWVKQEWEPHTLTVEDL------- 572
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
EST LG PR+ +AA +
Sbjct: 573 -------------------EST-----------------------LGAPRY-HFQAAGKS 589
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL +T GG V VE T + GKG L +TGQLGDV+KESAQ A T+VRA A L
Sbjct: 590 PEIGAVTGLAFTEVGGVVLTVEVTPLPGKGRLTITGQLGDVMKESAQAAWTFVRAYANQL 649
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ ED D+HIH P GA PKDGPSAG+T+ TA+ S +++ VR D AMTGE+T
Sbjct: 650 G-IEED---FYDRTDLHIHVPEGATPKDGPSAGITMATAIASAIAKRYVRHDLAMTGEIT 705
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GGVK+K+LAAHR GIK V+LPE N KDL E+P V LE R+E+VL+
Sbjct: 706 LRGNVLPIGGVKEKVLAAHRAGIKVVVLPEENRKDLEEIPENVRKVLEFHFVSRIEEVLK 765
Query: 814 QAF 816
A
Sbjct: 766 LAL 768
>gi|414162392|ref|ZP_11418639.1| lon protease [Afipia felis ATCC 53690]
gi|410880172|gb|EKS28012.1| lon protease [Afipia felis ATCC 53690]
Length = 808
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 337/794 (42%), Positives = 475/794 (59%), Gaps = 86/794 (10%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q ASD + I+ G A L L ++ P G V V++EGL R V + + R
Sbjct: 63 QKNASDDDPAADSIY--EIGTLASVLQL---LKLPDGTVK--VLVEGLDRARVTKYTDRT 115
Query: 90 TYYTARISSL---EMTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
YY A +L + T +E E + + DF + + K + E++ V++Q
Sbjct: 116 DYYEAEAVALADTDATSVEAEALGRSVVSDFESYVKLNKKISAEVVGVVQQ--------- 166
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
KLAD + + ++ +L+++ + RL K L++ + ++V +KI
Sbjct: 167 ----ITDFAKLADTVASHLAVKIADRQDILETLSVSQRLEKVLGLMESEISVLQVEKKIR 222
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELGD D+ D+L LE K+ + + Q E
Sbjct: 223 SRVKRQMEKTQREYYLNEQMKAIQKELGD-DEGRDELADLEEKIAKTKLSKEAREKAQHE 281
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L++L++M P T R YL+ + +PW K S+ + DL AA+E LD+DHYGL +VK R
Sbjct: 282 LKKLRQMSPMSAEATVVRNYLDWLLSIPWGKKSK-VKKDLGAAQEVLDTDHYGLEKVKDR 340
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRG
Sbjct: 341 IVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRG 400
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TFN
Sbjct: 401 HRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTFN 460
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+F+ TAN IP PL+DRMEVI + GYT EK+ IA +HLIP +
Sbjct: 461 DHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEVIRIAGYTENEKVEIARKHLIPTAIS 519
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+HGL S+ I + + LVI+RYTREAGVRNLER L+ LAR A
Sbjct: 520 KHGLSSKEFSIDDEALLLVIRRYTREAGVRNLERELSTLARKA----------------- 562
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP-- 622
+ E T T ++T+ A++E++LG P
Sbjct: 563 --------------------------VKELTISKKTTVKVTA------AVVEEMLGVPKF 590
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
R+ + E+ ++V G+ GL WT+ GGE+ +E+ M GKG + +TG L DV+KES A
Sbjct: 591 RYGEIESEDQV---GVVTGLAWTDVGGELLTIESVMMPGKGRMTVTGNLRDVMKESISAA 647
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA + + L + RDIH+H P GA PKDGPSAGV +VT++VS+ + +
Sbjct: 648 ASYVRSRAINFGIEPP----LFEKRDIHVHVPEGATPKDGPSAGVAMVTSIVSVLTGIPI 703
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V +PE N KDL E+ A+ +EI
Sbjct: 704 RHDVAMTGEITLRGRVLPIGGLKEKLLAAGRGGIKTVFIPEDNAKDLTEISDAIKGGMEI 763
Query: 803 ILAKRMEDVLEQAF 816
I RM++VL +A
Sbjct: 764 IPVSRMDEVLAKAL 777
>gi|292491478|ref|YP_003526917.1| ATP-dependent protease La [Nitrosococcus halophilus Nc4]
gi|291580073|gb|ADE14530.1| ATP-dependent protease La [Nitrosococcus halophilus Nc4]
Length = 779
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/667 (47%), Positives = 435/667 (65%), Gaps = 58/667 (8%)
Query: 151 PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQ 210
P+H++ + + + F+++ +L + L ++ +Q + V +KIT + +
Sbjct: 158 PLHQIY-LLTSVLSLDFDKEKELLAAATQAEALHLMYRYLNHEVQVLEVRQKITSTAQTE 216
Query: 211 LSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKK 270
+ K Q+E++LRQQ+ AI+EELG+ ++ ++ L R+M+ +P + K V+KEL RL++
Sbjct: 217 IDKKQREYVLRQQLEAIQEELGEKSPEQAEISELRRRMEETELPELVRKEVEKELTRLER 276
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
M P Y +R Y+EL +LPW K +E+ LDLK A+E LD DH+ L VK+RIIE+LA
Sbjct: 277 MPSAAPDYQLTRGYVELALELPWNKTTED-RLDLKRAREILDEDHFDLEDVKERIIEHLA 335
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
V KL P+A+ P+LCFVGPPGVGKTS+ SIA ALGRKF R+SLGG+ DEA++RGHRRTYI
Sbjct: 336 VMKLNPEAKSPILCFVGPPGVGKTSVGQSIARALGRKFERMSLGGLHDEAELRGHRRTYI 395
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
G+MPGR+I ++R G NP+++LDEIDK G D RGDPA+ALLEVLDP QN F+D+YL++
Sbjct: 396 GAMPGRIIRAIRRAGYKNPLLMLDEIDKLGRDFRGDPAAALLEVLDPAQNVEFHDNYLDL 455
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
PFDLSKV FV TAN IP PLLDRMEV+ LPGY+ EEK +IA R+LI R + + GL
Sbjct: 456 PFDLSKVFFVTTANTLDTIPRPLLDRMEVLRLPGYSDEEKQQIARRYLIGRQIGEAGLSE 515
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
L IP+ ++ VI+RYTREAGVR LER L +AR A +VAE + +
Sbjct: 516 IQLSIPDETLRYVIRRYTREAGVRELERVLGRIARKVATQVAEGQTQ------------- 562
Query: 571 SPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAA 630
PM V L ++LGP RF E
Sbjct: 563 -------------------PM-----------------TVKPKKLVELLGPERFFAEEVR 586
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAM-RGKGELHLTGQLGDVIKESAQIALTWVRAR 689
+++ PG++ GL WT GG+V +VEA + GKG L LTGQLG++++ESA+ A +++ +
Sbjct: 587 QQL-PPGVAAGLAWTEAGGDVLYVEAALLPEGKG-LTLTGQLGNIMQESAKAAQSYLWSH 644
Query: 690 ATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMT 749
A +L++ ++ +HIH PAGA+PKDGPSAGVT+ TAL S ++ VR DTAMT
Sbjct: 645 AEELRI----DQKSIRESGVHIHVPAGAIPKDGPSAGVTMATALTSAYAHWPVRNDTAMT 700
Query: 750 GEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRME 809
GE+TL GLVLPVGG+K+K+LAAHR GI+R+ILP+ N KDL E+P V SL+ ILA+R+E
Sbjct: 701 GEITLSGLVLPVGGIKEKVLAAHRAGIRRIILPKENEKDLREIPEHVRQSLQFILAERIE 760
Query: 810 DVLEQAF 816
+VL A
Sbjct: 761 EVLTAAI 767
>gi|222055036|ref|YP_002537398.1| ATP-dependent protease La [Geobacter daltonii FRC-32]
gi|221564325|gb|ACM20297.1| ATP-dependent protease La [Geobacter daltonii FRC-32]
Length = 772
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 302/664 (45%), Positives = 433/664 (65%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+L+D+ + +E +L++VD RL K + +Q +++ ++ +V ++ K
Sbjct: 164 RLSDLVALYVNLPPDELQKLLETVDPIERLKKVYMSLTAEVQRLQIKGEVQAEVTKKVGK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+LLR+QM+ I+EELG+ DD + ++ L +K+ SAGMP + K +KEL+RL K+ P
Sbjct: 224 TQKEYLLREQMKQIQEELGEEDDRQTEIKDLRKKLLSAGMPEEVRKIAEKELKRLDKINP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
P Y+ SR YL+ + ++PW+ A+ + + D+ A+E L+ DH+ L +VK+RI+EYLAVR
Sbjct: 284 ASPEYSVSRTYLDYLLNMPWQNATID-NRDINQAEEVLNQDHFDLKKVKERILEYLAVRT 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
LK +GP+LCFVGPPGVGKTSL SIA ALGRKFIR+SLGG++DEA+IRGHRRTYIG++
Sbjct: 343 LKEKMKGPILCFVGPPGVGKTSLGRSIARALGRKFIRVSLGGMRDEAEIRGHRRTYIGAL 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I + R G NPV +LDE+DK G D RGDPASALLEVLDPEQN +F DHYL+VPFD
Sbjct: 403 PGRIIQEIYRAGHNNPVFMLDEVDKIGIDFRGDPASALLEVLDPEQNFSFTDHYLDVPFD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
L+ V+F+ TAN P+PP L DRMEVI L GYT EEK RIA+ +LIPR ++++GL
Sbjct: 463 LTNVMFITTANILDPVPPALKDRMEVINLSGYTDEEKERIAVTYLIPREIEENGLSKYQP 522
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ E + +I+ +TREAGVRNL+R++ ++ R A ++ + +
Sbjct: 523 KFSEDAIYKIIRDHTREAGVRNLQRHIGSICRKVAKEITQNKP----------------- 565
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
P + T E ++E+ LGP +F D AE+
Sbjct: 566 ----------------PREQITQE----------------LVEEFLGPRKFFDEVTAEKD 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL WT GG++ FVEA M+GKG+L LTG LG+++KESA+ AL++V A +L
Sbjct: 594 RV-GVVTGLAWTETGGDIIFVEANRMKGKGDLILTGSLGEIMKESARAALSFVEANCVEL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
++ ++ G +IHIH PAG++PKDGPSAG+T+ TALVSL S + + D AMTGE++
Sbjct: 653 KIDPKE----FTGMNIHIHVPAGSIPKDGPSAGITMTTALVSLLSGREAQRDVAMTGEVS 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
L G VL +GG+K+K+LAA R G+K+VI+PERN KDL ++P V L I + + +
Sbjct: 709 LTGRVLAIGGLKEKVLAARRAGVKKVIVPERNRKDLEDIPQDVREQLNFIFIEDVREAFV 768
Query: 814 QAFE 817
QA +
Sbjct: 769 QALK 772
>gi|326202570|ref|ZP_08192438.1| ATP-dependent protease La [Clostridium papyrosolvens DSM 2782]
gi|325987154|gb|EGD47982.1| ATP-dependent protease La [Clostridium papyrosolvens DSM 2782]
Length = 781
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 325/738 (44%), Positives = 444/738 (60%), Gaps = 76/738 (10%)
Query: 96 ISSLEMTKIEMEQVEQDPDFIA------------LSRQFKATAMELISVLEQKQKTGGRT 143
I+ E+ KI V+ DP FIA + + +A L+S E K G+
Sbjct: 97 INRAEIKKI----VQDDPFFIAEVVETRVEEEDFVENEVEALKRRLVSAFEDYVKLSGKV 152
Query: 144 K-----VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIR 198
++E I +++DI + + E++ +L R+ K E++ + + +
Sbjct: 153 SPDTALSVVEISNISQVSDIIANNIPLKVEQKQAILSEFHPLRRVEKLLEILYQETEILE 212
Query: 199 VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIW 258
+ + I KV Q+ K QKE+ LR+QM+AI+ ELGD + ++ + K++SAG+P +
Sbjct: 213 IEKDINSKVRKQIDKLQKEYYLREQMKAIQTELGDREGIAGEVEEYKDKLKSAGLPEEVE 272
Query: 259 KHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGL 318
K V KEL RL KM R YL+ I DLPW K+++E +DLK+A+E L+ DHYGL
Sbjct: 273 KKVHKELDRLLKMPQGSAEGGVIRTYLDWIFDLPWSKSTQE-HIDLKSAEEILEKDHYGL 331
Query: 319 VRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKD 378
+VK+RIIEYLAV+KLK +GP+LC VGPPGVGKTS+A SIA AL R ++RISLGGVKD
Sbjct: 332 TKVKERIIEYLAVQKLKNSLKGPILCLVGPPGVGKTSIAKSIAKALNRNYVRISLGGVKD 391
Query: 379 EADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPE 438
E++IRGHRRTY+GSMPGR+I LK+ G NP++LLDEIDK SD RGDPASA+LEVLD E
Sbjct: 392 ESEIRGHRRTYVGSMPGRIISALKQAGSNNPLILLDEIDKMSSDFRGDPASAMLEVLDSE 451
Query: 439 QNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHL 498
QN F DHY+ +PF+LS +F+ TAN IP PLLDRME+I L YT E+K IAM++L
Sbjct: 452 QNFAFRDHYMELPFNLSNALFLTTANTLDTIPRPLLDRMEIINLSSYTEEDKANIAMKYL 511
Query: 499 IPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQ 558
+P+ + HGL ++ +++ E V+ +I YTREAGVRNLER + ++ R A KV E ++
Sbjct: 512 LPKQIKLHGLTTKNIRLDEGTVRDIINYYTREAGVRNLEREIGSVCRKVA-KVIVSESKK 570
Query: 559 ALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKV 618
+ + V+ LEK
Sbjct: 571 S------------------------------------------------VTVNRNNLEKF 582
Query: 619 LGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKES 678
LG RF A E+ GI+ GL WT GG+ +E M+G G+L LTG LGDV+KES
Sbjct: 583 LGVKRFRFDYAGEK-DEIGIATGLAWTPVGGDTLSIEVNLMQGNGKLELTGHLGDVMKES 641
Query: 679 AQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFS 738
A+ A++++R+R T+L++ + DIHIH P GA+PKDGPSAG+TL TA+VS S
Sbjct: 642 AKAAMSFIRSRCTELKI----DEKFHEKNDIHIHVPEGAIPKDGPSAGITLATAMVSALS 697
Query: 739 RKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLA 798
V AMTGE+TLRG VLP+GG+K+K+LAAHR GI+ +ILP N KD+ E+P V
Sbjct: 698 GLPVNRKVAMTGEITLRGRVLPIGGLKEKVLAAHRAGIETIILPVDNEKDIEEIPQNVRQ 757
Query: 799 SLEIILAKRMEDVLEQAF 816
SL I A M VLE A
Sbjct: 758 SLNFICASEMNTVLENAL 775
>gi|430750766|ref|YP_007213674.1| ATP-dependent protease La [Thermobacillus composti KWC4]
gi|430734731|gb|AGA58676.1| ATP-dependent protease La [Thermobacillus composti KWC4]
Length = 796
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 319/758 (42%), Positives = 464/758 (61%), Gaps = 64/758 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R + E +Y + L E+ DP+ AL R
Sbjct: 84 PNG--TIRVLVEGLTRAEITEYVPNDEFYEVMVKELP------ERDAADPEIDALMRTVL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
I++ K+ T + + +LAD+ + + +++ +L+++D++ RL
Sbjct: 136 GQFEHYINL--SKKVTPETMAAVSDIEEPGRLADVIASHLSLKIKDKQDILETIDVRERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K +L++ + + + KI+Q+V+ Q+ K+QKE+ LR+QM+AI++ELGD + ++
Sbjct: 194 EKILDLLNNEREVLELERKISQRVKKQMEKTQKEYYLREQMKAIQKELGDKEGRAGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L ++++A +P N+ + + KE+ RL++M R Y++ + LPW K +E+ DLD
Sbjct: 254 LRAQLEAADVPDNVRERISKEIDRLERMPTSSAEAGVIRNYIDWLLALPWRKRTED-DLD 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
+ A+ L+ DHYGL + K+R++EYLAV+KL +GP+LC VGPPGVGKTS+A SIA +
Sbjct: 313 IAKAEAVLNEDHYGLEKPKERVLEYLAVQKLVNRLKGPILCLVGPPGVGKTSIARSIARS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
LGR+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV LLDEIDK D
Sbjct: 373 LGRQFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGSANPVFLLDEIDKMAMDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDPA+ALLEVLDPEQN TF+DHY+ +PFDLS V+FV TAN IP PLLDRMEV+ +P
Sbjct: 433 RGDPAAALLEVLDPEQNSTFSDHYIELPFDLSSVMFVTTANAVHNIPRPLLDRMEVLYIP 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK IA R+L+P+ HGL E L + ++ +I+ YTRE+GVR LE+ +AAL
Sbjct: 493 GYTELEKREIAERYLLPKQKRDHGLKEEQLAVEPDALQALIREYTRESGVRGLEQQIAAL 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA ++ V+ R
Sbjct: 553 CRKAAKEI----------------------------------------------VTEPDR 566
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
T +VVD +E+ LGP ++ AE+ G + GL WT GG+ +E T M G G
Sbjct: 567 GT--IVVDRQRVEEWLGPAKY-RYGLAEQEDQVGAATGLAWTEVGGDTLVIEVTVMPGSG 623
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A ++ R++A + + + + DIHIH P GA+PKDGP
Sbjct: 624 KLTLTGKLGDVMKESAQAAFSYTRSKAVEFGIEP----DFHEKNDIHIHVPEGAIPKDGP 679
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + + V + AMTGE+TLRG VLP+GG+K+K LAAHR GI++V++P+
Sbjct: 680 SAGITMATALISALTGRAVSKEVAMTGEITLRGRVLPIGGLKEKSLAAHRAGIRKVLVPK 739
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
N +DL EVP ++ LE ++ M++VL A GG P
Sbjct: 740 DNARDLQEVPESIREELEFVMVSHMDEVLAHALVGGLP 777
>gi|433654494|ref|YP_007298202.1| ATP-dependent protease La [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292683|gb|AGB18505.1| ATP-dependent protease La [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 782
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 313/755 (41%), Positives = 462/755 (61%), Gaps = 77/755 (10%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R ++ L + +++ + + KI+ ++++D + AL R + E IS
Sbjct: 86 VLVEGISRAELKNLISSESFFEVEV----IEKIDNTEIQKDSELEALMRSVTSAFEEYIS 141
Query: 132 VLEQKQKTGGRTKVLLETV-------PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLS 184
+ +K+ L+++ +LAD+ ++ + +L+ D K RL
Sbjct: 142 I---------SSKIPLDSIYNVVSVEEPGRLADVITEHLSLNQSQNQELLECFDTKERLE 192
Query: 185 KATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVAL 244
K + + L + + +KI +V Q+ KSQ+E+ LR+Q++AIK ELG++D+ + ++
Sbjct: 193 KLLGFILKELDILEIEKKINMRVHKQIDKSQREYYLREQLKAIKAELGESDEIDQEIDEY 252
Query: 245 ERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDL 304
E K++S +P + + ++EL+RL +M P + R Y++ + DLPW + ++++ LDL
Sbjct: 253 EEKIESKDLPDYVKEKAKEELKRLSRMGPGSAEGSVVRTYIDWLLDLPWNEETKDV-LDL 311
Query: 305 KAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASAL 364
K A++ L+ DHYGL +VK+RI+E+LAVR + P+LC VGPPGVGKTSL SIA A+
Sbjct: 312 KRAEKILNEDHYGLKKVKERILEFLAVRSYHEKMKSPILCLVGPPGVGKTSLGKSIARAM 371
Query: 365 GRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVR 424
RKF+R+SLGGV+DEA+IRGHRRTY+G++PG +I+ LK G NPV LLDEIDK SD R
Sbjct: 372 NRKFVRLSLGGVRDEAEIRGHRRTYVGAIPGGIINSLKIAGSKNPVFLLDEIDKMSSDFR 431
Query: 425 GDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPG 484
GDPASA+LEVLDPEQN T+ DHY+++PFDLS+V+F+ TAN IP PLLDRMEVI + G
Sbjct: 432 GDPASAMLEVLDPEQNSTYRDHYIDLPFDLSRVLFITTANTLDTIPAPLLDRMEVIYISG 491
Query: 485 YTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALA 544
YT EEKL IA HL+P++L +HG E ++I ++ + +I YTREAGVR LE+N+A +
Sbjct: 492 YTEEEKLHIAKEHLVPKILKEHGATDEIIKIQDSAIIGIISEYTREAGVRALEQNIAKVV 551
Query: 545 RAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R + + E + + +++ + LG PL FR
Sbjct: 552 RKSIKTIVEDKAKSIKVGKQNLQKYLGKPL----------------------------FR 583
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
I D+A L+ + G+ GL WT GG+ VEAT M G G
Sbjct: 584 I------DKANLQNKV-----------------GMVTGLAWTRVGGDTLTVEATTMPGTG 620
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTGQLGDV+KESAQ +++R+ A L + + NL DIHIH P GA+PKDGP
Sbjct: 621 KLTLTGQLGDVMKESAQAGFSYIRSNADTLGINKDFYKNL----DIHIHVPEGAIPKDGP 676
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+VTA+VS + VR D AMTGE+TL G VLP+GG+K+K+LAAHR GI ++I P
Sbjct: 677 SAGITMVTAMVSAIKKVPVRGDIAMTGEITLTGKVLPIGGLKEKVLAAHRAGILKIIAPA 736
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N +DL E+P +V LE +++VL+ + G
Sbjct: 737 DNKRDLDEIPQSVKKKLEFKFVSNIDEVLKISLVG 771
>gi|89895941|ref|YP_519428.1| hypothetical protein DSY3195 [Desulfitobacterium hafniense Y51]
gi|89335389|dbj|BAE84984.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 804
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 331/760 (43%), Positives = 466/760 (61%), Gaps = 78/760 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQV-EQDPDFIALSR-- 120
P G T V++EG R + E T Y+ R+ E E V E P+ AL+
Sbjct: 80 PGG--TMRVLVEGKSRGKILEFITDEPYFKVRVEEAE------EGVKENTPEIDALTHGV 131
Query: 121 --QFKATAMELISVLEQK--QKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
QF+ A L +K Q+T G +L +LADI + + ++ +L+S
Sbjct: 132 IHQFEEYAK-----LSKKVPQETLG---TVLGVNDSGRLADIVASHLNLKLGDKQAILES 183
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+++ RL + TE++ R + + + +I +V Q+ K+QKE+ LR+QM+AI++ELGD D+
Sbjct: 184 LEVAQRLERLTEIIMRENEILELERRIGLRVRKQMEKTQKEYYLREQMKAIQKELGDKDE 243
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+ ++ K+ A +P + + KE+ RL+KM T R YL+ I LPW
Sbjct: 244 KQAEVEEYREKVAQAKLPEEVAERALKEIDRLEKMPQASSEGTVVRTYLDWILALPWTTM 303
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
S++ D+K A++ L+ DHYGL ++K+RI+E+LA+RKL P + P++CFVGPPGVGKTSL
Sbjct: 304 SKD-KTDIKRAEKILNDDHYGLAKIKERILEFLAIRKLTPKMKSPIICFVGPPGVGKTSL 362
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
A S+A AL RKF+R+SLGGV+DEA+IRGHRRTYIG++PGR+I G++ G NPV LLDEI
Sbjct: 363 AKSVARALDRKFVRMSLGGVRDEAEIRGHRRTYIGALPGRIIQGMRTAGTANPVFLLDEI 422
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK SD RGDPA+ALLEVLDPEQN +F+DHYL++P+DLS +F+ TAN IP PLLDR
Sbjct: 423 DKMASDFRGDPAAALLEVLDPEQNFSFSDHYLDLPYDLSHTLFIMTANSLYSIPRPLLDR 482
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVI L GYT +EK+ IA R+L+P+ + HGL + L+I + ++ ++Q YTRE+GVRNL
Sbjct: 483 MEVISLSGYTEDEKVNIAKRYLVPKQMKAHGLKASQLEIGDKVILKLVQGYTRESGVRNL 542
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER +A L R A +V ++E + A E+ P
Sbjct: 543 ERQIANLCRKVATRVVKKEWKTA---------------------------ELRP------ 569
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
MLE+ LG PR+ E A G + GL +T GG+V +E
Sbjct: 570 ----------------EMLEEFLGSPRY-QFEKARIKPEIGAATGLAYTEVGGDVLTIEV 612
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ GKG+L LTG+LGDV+KESA T+VR+ + +L + + + D+HIH P G
Sbjct: 613 IPLPGKGQLTLTGKLGDVMKESAYAGRTFVRSHSRELGIPD----DFYEKTDLHIHVPEG 668
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A+PKDGPSAG+T+ TA+ S +++ V +D AMTGE+TLRG VLP+GGVK+K+LAAHR GI
Sbjct: 669 AIPKDGPSAGITMATAMASALAKRAVPSDLAMTGEITLRGNVLPIGGVKEKVLAAHRAGI 728
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K+VILPE+N KDL EVP V LE RME+V++ A
Sbjct: 729 KQVILPEQNRKDLEEVPENVRKELEFHFVSRMEEVIKIAL 768
>gi|255531101|ref|YP_003091473.1| ATP-dependent protease La [Pedobacter heparinus DSM 2366]
gi|255344085|gb|ACU03411.1| ATP-dependent protease La [Pedobacter heparinus DSM 2366]
Length = 833
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 318/762 (41%), Positives = 451/762 (59%), Gaps = 67/762 (8%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
H+ + ++ P G T V+++G RF + E Y IS TK + D +F
Sbjct: 122 HIIKMLQMPDGNTT--VIIQGKQRFRLLEEVQSEPYIKVTISKFAETK-----HKSDKEF 174
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
AL K + ++I + G +E+ L + ++ ++ ML+
Sbjct: 175 KALVASIKEMSAQIIQLSPNIPSEAGIALKNIESTSF--LINFISSNMNADVTDKQKMLE 232
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+L+ R EL+ LQ + + +I KV L K Q+++ L QQ++ I+EELG N
Sbjct: 233 MTNLRERAMMVMELLTLELQMLELKNQIQSKVRTDLDKQQRDYFLNQQLKTIQEELGGNS 292
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D + ALE + + ++ H KEL +L +M P P Y+ YLEL+ DLPW +
Sbjct: 293 SDLE-YEALESRAKKKKWDIHVKDHFNKELEKLGRMNPAAPDYSVQINYLELLLDLPWGE 351
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+++ + DLK A+ LD DH+GL +VKQRIIEYLAV KLK D + P++C VGPPGVGKTS
Sbjct: 352 FTKD-NFDLKRAQRVLDKDHFGLEKVKQRIIEYLAVLKLKRDMKAPIICLVGPPGVGKTS 410
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA AL RK++R++LGG+KDEA+IRGHR+TYIG+MPGR+I +K+ G NPV +LDE
Sbjct: 411 LGKSIAKALNRKYVRMALGGIKDEAEIRGHRKTYIGAMPGRIIQSIKKAGASNPVFVLDE 470
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK GSD RGDP+SALLEVLDPEQN FNDHY+ +DLS V+F+ATAN I P LLD
Sbjct: 471 IDKVGSDFRGDPSSALLEVLDPEQNSAFNDHYVETDYDLSNVLFIATANSLSSIHPALLD 530
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+IE+ GYT EEK+ IA ++L+P+ +QHG+ ++ + + +++ VI+ YTRE+GVR
Sbjct: 531 RMEIIEVNGYTIEEKIEIAKKYLLPKQKEQHGIKTKDITLKNNLIEKVIEDYTRESGVRG 590
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGES 594
LE+ + +L R A K+A +E S DV R LG+PL D L +G EV
Sbjct: 591 LEKKIGSLVRGVATKIAMEESYDPALSLDDVERILGAPLYDKDLYEGNEV---------- 640
Query: 595 THEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFV 654
G+ GL WT GG++ F+
Sbjct: 641 -----------------------------------------AGVVTGLAWTQVGGDILFI 659
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFP 714
EA+ GKG+L LTG LG+V+KESA IAL ++RA A + L D+H+H P
Sbjct: 660 EASLSPGKGKLTLTGNLGEVMKESAIIALAYLRAHAELFNI----DYALFDQWDVHVHVP 715
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
AGA PKDGPSAG+T++TAL S F++++V+++ AMTGE+TLRG VLPVGG+K+KILAA R
Sbjct: 716 AGATPKDGPSAGITMLTALTSAFTQRKVKSNLAMTGEITLRGKVLPVGGIKEKILAAKRA 775
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
IK +IL + N KD++E+ + + L M++V++ A
Sbjct: 776 NIKDIILCKSNRKDILEIKESYIKDLNFHYVTEMKEVIDLAL 817
>gi|319651745|ref|ZP_08005871.1| ATP-dependent protease La [Bacillus sp. 2_A_57_CT2]
gi|317396564|gb|EFV77276.1| ATP-dependent protease La [Bacillus sp. 2_A_57_CT2]
Length = 775
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/770 (40%), Positives = 469/770 (60%), Gaps = 91/770 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-----------MTKIEMEQVEQD 112
P+G T V++EGL R + + +Y+ + E + + +E EQ
Sbjct: 82 PNG--TIRVLVEGLKRAEIIDFQDEAEHYSVSVKVFEDPETKDVEDQALMRTMLEYFEQ- 138
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I +S++ A ++ +E+ GR +ADI + + +E+
Sbjct: 139 --YIKVSKKISAETYSSVADIEEP----GR------------MADIISSHLPLKLKEKQE 180
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L+++D+K R+++ E++ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELG
Sbjct: 181 ILETIDVKERMNQVIEIIHNEKEVLNLEKKIGQRVKKSMERTQKEYYLREQMKAIQKELG 240
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D + ++ L K+++AGMP ++ KEL R +K+ R Y+E + LP
Sbjct: 241 DKEGKTGEIAELTEKIENAGMPEHVELTALKELDRYEKVPSSSAESAVIRNYIEWLVTLP 300
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W KA+++ DLD+ A+ L+ DH+GL +VK+R++EYLAV+KL +GP+LC GPPGVG
Sbjct: 301 WSKATDD-DLDILKAERILNEDHHGLEKVKERVLEYLAVQKLTNSLKGPILCLAGPPGVG 359
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSLA SIA++L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV L
Sbjct: 360 KTSLARSIATSLNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGTINPVFL 419
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK SD RGDP+SA+LEVLDPEQN F+DHY+ +DLSKV+F+ATAN IP P
Sbjct: 420 LDEIDKMSSDFRGDPSSAMLEVLDPEQNHNFSDHYIEETYDLSKVMFIATANNLGTIPGP 479
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
LLDRMEVI + GYT +EK+ IA HL+P+ + +HGL LQI E ++ V++ YTREAG
Sbjct: 480 LLDRMEVITIAGYTEQEKIHIAKDHLLPKQIKEHGLSKSQLQIREDGLQKVVRYYTREAG 539
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VR LER LA + R A + E+++ VI G
Sbjct: 540 VRGLERQLATICRKTAKIIVSGEKKK-----------------------------VIVNG 570
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAERVAAPGISVGLVWTNFGGE 650
++T E LG P R+ E ++V G++ GL +T GG+
Sbjct: 571 KNTEE--------------------FLGKPKYRYGQAELEDQV---GVATGLAYTTVGGD 607
Query: 651 VQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIH 710
+E + GKG+L LTG+LGDV+KESAQ A ++VR++A +L + N + DIH
Sbjct: 608 TLQIEVSLSPGKGKLVLTGKLGDVMKESAQAAFSYVRSKAKELGI----DENFHEKHDIH 663
Query: 711 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILA 770
IH P GAVPKDGPSAG+T+ TALVS S K +R + MTGE+TLRG VLP+GG+K+K L+
Sbjct: 664 IHVPEGAVPKDGPSAGITITTALVSALSGKPIRKEVGMTGEITLRGRVLPIGGLKEKSLS 723
Query: 771 AHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGC 820
AHR G+ ++ILP+ N KD+ ++P ++ L+ +L +++VL+ A GG
Sbjct: 724 AHRAGLTKIILPKDNEKDIEDIPESIREELDFVLVSHVDEVLKHALNGGV 773
>gi|433461292|ref|ZP_20418902.1| ATP-dependent protease La [Halobacillus sp. BAB-2008]
gi|432190119|gb|ELK47162.1| ATP-dependent protease La [Halobacillus sp. BAB-2008]
Length = 776
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 326/781 (41%), Positives = 478/781 (61%), Gaps = 94/781 (12%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-------- 100
G AR + V+ P+G T V++EGL R ++E+ ++Y A I+ ++
Sbjct: 70 GTVARVKQM---VKLPNG--TNRVLVEGLYRAGIEEIRDDDSFYQAEITVIDDEHADRNE 124
Query: 101 ---MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
+ + M+Q E+ ++ +S++ +S ++ P H LAD
Sbjct: 125 EEALMRTLMDQFEK---YVKVSKKVSQETFNTVSDIDD---------------PSH-LAD 165
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
+ + I +++ +L++ ++K RL K E++ + +++ +KI Q+V+ + K+QKE
Sbjct: 166 MVSSHLPIKLKDKQAVLETRNVKERLKKLIEIIGNEREVLQIEKKIGQRVKKSMEKTQKE 225
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ LR+QM+AI+ ELGD D ++ L+ K++ A MP + + KEL R +K+ PQ
Sbjct: 226 YYLREQMKAIQSELGDKDGKTGEVAQLKEKIEKAAMPERVEEVAYKELGRYEKI-PQSSA 284
Query: 278 YTSS-RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKP 336
+S R Y+E + LPW + +E+ +LD+ A+E LD DHYGL +VK+R++EYLAV+KL
Sbjct: 285 ESSVIRNYIEWLVSLPWSEETED-NLDVNHAEEVLDEDHYGLEKVKERVLEYLAVQKLTQ 343
Query: 337 DARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGR 396
+GP+LC GPPGVGKTSLA SIA ++ RKF+RISLGGV+DEA+IRGHRRTYIG+MPGR
Sbjct: 344 TIKGPILCLAGPPGVGKTSLAKSIARSINRKFVRISLGGVRDEAEIRGHRRTYIGAMPGR 403
Query: 397 LIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 456
+I G+KR NPV LLDEIDK SD RGDP+SA+LEVLDPEQN TF+DH++ +DLSK
Sbjct: 404 IIQGMKRAETVNPVFLLDEIDKMASDFRGDPSSAMLEVLDPEQNGTFSDHFIEENYDLSK 463
Query: 457 VIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI- 515
V+F+ATAN IP PL DRME+I + GYT EKL IA HL+P+ + ++GL +Q+
Sbjct: 464 VMFIATANNISNIPGPLRDRMEIITIAGYTEVEKLHIAKDHLLPKQVKENGLKKGQMQVR 523
Query: 516 PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLD 575
+A++KL I+RYTREAGVR LER LA+L R AA + E+++ + + K
Sbjct: 524 DDALLKL-IRRYTREAGVRGLERELASLCRKAAKIIVSGEKQRVVVTEK----------- 571
Query: 576 NRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAA 635
LE++LG P+F AE
Sbjct: 572 --------------------------------------QLEELLGRPKF-RYGRAELEDQ 592
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
G + GL +T GG+ +E + GKG L LTG+LGDV+KESAQ A +++R+RA +L++
Sbjct: 593 IGAATGLAYTTAGGDTLSIEVSLYPGKGNLTLTGKLGDVMKESAQAAFSYIRSRAEELKI 652
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
E ++ DIHIH P GA PKDGPSAG+T+ TALVS + + VR + MTGE+TLR
Sbjct: 653 DPE----FVEKNDIHIHVPEGATPKDGPSAGITMATALVSALTGRPVRKEVGMTGEITLR 708
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
G VLP+GG+K+K L+AHR G+ ++I+P+ N KDL ++PA++ L + K ++ VLEQA
Sbjct: 709 GRVLPIGGLKEKSLSAHRAGLTKIIIPDENKKDLEDIPASIREGLTFVPVKHLDQVLEQA 768
Query: 816 F 816
Sbjct: 769 L 769
>gi|159898145|ref|YP_001544392.1| ATP-dependent protease La [Herpetosiphon aurantiacus DSM 785]
gi|302425096|sp|A9B5N1.1|LON1_HERA2 RecName: Full=Lon protease 1; AltName: Full=ATP-dependent protease
La 1
gi|159891184|gb|ABX04264.1| ATP-dependent protease La [Herpetosiphon aurantiacus DSM 785]
Length = 815
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 332/760 (43%), Positives = 465/760 (61%), Gaps = 70/760 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T ++ L R + E+ YY A+I + E EQ+E AL R
Sbjct: 89 PDG--TLRAAMQVLERIEIVEIIQTEPYYRAKIRVMPDALAESEQLE----VTALMRSIG 142
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
A ++ ++ Q T VL E P +LA + + +S ++ +L +K +L
Sbjct: 143 TIASQIAPLIPQF-PTELLNSVLSEEDP-RRLAYLVASYARMSVTDRQAVLAEPSIKQKL 200
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K E++ R L +++ ++I +V+ ++SK+Q+E++LR+Q++AI++ELG+N++ E ++
Sbjct: 201 LKLNEVLTRELNVLQIGQQIQSQVQDEMSKTQREYVLREQLKAIRKELGENNEQEVEVDR 260
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L ++++AGM + + +EL RL++M Y+ R YLE + LPW+K S++ +D
Sbjct: 261 LAEQIEAAGMSAEAHQQAMRELDRLRQMPTAAAEYSVIRGYLETLIALPWQKRSDDT-ID 319
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK----PD---ARGPVLCFVGPPGVGKTSL 356
+ A E LD+DHYGL +K+RI++YLAVR+L+ P+ RG +LCFVGPPGVGKTSL
Sbjct: 320 VAQATEVLDADHYGLDEIKERILDYLAVRELRRKRSPERDPGRGAILCFVGPPGVGKTSL 379
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
SIA A+ R+F+R+SLGGV DEA+IRGHRRTYIG+MPG LI ++R GV NPV+LLDEI
Sbjct: 380 GRSIAKAMNREFVRLSLGGVHDEAEIRGHRRTYIGAMPGSLIQAIRRSGVNNPVVLLDEI 439
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK SD RGDP SA+LEVLDP QN F DHYL+V +DLS V+F+ATAN Q IP PL DR
Sbjct: 440 DKLSSDHRGDPTSAMLEVLDPAQNTNFRDHYLDVAWDLSPVMFIATANTLQTIPAPLRDR 499
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
+E+I+L YT EK IA R+L+P +QH L ++I + + I+ YTREAGVRNL
Sbjct: 500 LEIIQLGSYTMREKYEIASRYLVPEQREQHSLAPNEVEIDHEALLVAIEEYTREAGVRNL 559
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
E+ + L R AA +VA LGS
Sbjct: 560 EQQIGTLMRKAARQVA----------------LGS------------------------- 578
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
+P+V+D A + LG R+ E ER PGI GLVWT GG++ F+EA
Sbjct: 579 --------ATPIVLDPAKTREYLGKRRYFS-EIHERTDRPGIVTGLVWTPVGGDIIFIEA 629
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
T M G+G L+GQLGDV+KESA+ AL+WVRA + N Q D+H+H PAG
Sbjct: 630 TKMTGRGNFALSGQLGDVMKESARAALSWVRAEGEAYGI----DPNFAQHYDLHVHVPAG 685
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAG+ + TALVSL + + +R D AMTGE+TLRG VLP+GGV++K+LAAHR GI
Sbjct: 686 AQPKDGPSAGIAMATALVSLLTGRVLRDDVAMTGEITLRGKVLPIGGVREKVLAAHRAGI 745
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+ +ILP+RNL DL E+PA VLA ++ + + V+E A
Sbjct: 746 RTIILPQRNLADLDEIPADVLAEVQFHGVEHVGQVIELAL 785
>gi|387890166|ref|YP_006320464.1| DNA-binding protein [Escherichia blattae DSM 4481]
gi|414595520|ref|ZP_11445139.1| Lon protease [Escherichia blattae NBRC 105725]
gi|386924999|gb|AFJ47953.1| DNA-binding protein [Escherichia blattae DSM 4481]
gi|403193483|dbj|GAB82791.1| Lon protease [Escherichia blattae NBRC 105725]
Length = 784
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 331/765 (43%), Positives = 466/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + LS G ++TA+ LE IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGDHFTAQAEYLESPAIEEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIEAAKMPKEAREKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLDRVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L++ ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKNELKVDDSAIVGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + + + RDIH+H
Sbjct: 613 IETACIPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGI----NTDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL ++P V+A LEI KR+E+VL+ A +
Sbjct: 729 GGIKTVLIPDENKRDLEDIPENVIADLEIHPVKRIEEVLQLALQN 773
>gi|253699343|ref|YP_003020532.1| ATP-dependent protease La [Geobacter sp. M21]
gi|251774193|gb|ACT16774.1| ATP-dependent protease La [Geobacter sp. M21]
Length = 794
Score = 583 bits (1504), Expect = e-163, Method: Compositional matrix adjust.
Identities = 308/670 (45%), Positives = 430/670 (64%), Gaps = 59/670 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+L+D+ + +E +L++VD RL K + +Q +++ ++ +V ++ K
Sbjct: 164 RLSDLVALYLNLPIDELQKLLETVDPLERLKKVYMHLTNEVQRLQIKGEVQAEVTKKVGK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQKEFLLR+QM+ I+EELG+ D + L K++SA MP ++ K +KE+RRL+++ P
Sbjct: 224 SQKEFLLREQMKQIQEELGEEDSRLGEANELRSKVESAHMPEDVRKIAEKEMRRLERINP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
P YT SR YL+ + +PW+ ++ + + D+ A+ L+ DHY L +VK+RI+EYLAVR
Sbjct: 284 ASPEYTVSRTYLDYLTTIPWQVSTPD-NRDINQAEAILNEDHYDLKKVKERILEYLAVRS 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
LK +GP+LCFVGPPGVGKTSL SIA LGRKFIRISLGG++DEA+IRGHRRTYIG++
Sbjct: 343 LKDKMKGPILCFVGPPGVGKTSLGKSIARTLGRKFIRISLGGMRDEAEIRGHRRTYIGAL 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I + R G NPV +LDE+DK G+D RGDPASALLEVLDPEQN +F DHYL+VPFD
Sbjct: 403 PGRIIQEINRAGSNNPVFMLDEVDKIGADFRGDPASALLEVLDPEQNFSFTDHYLDVPFD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
L+ V+F+ TAN+ PIP PL DRMEVI L GYT EEKL IA +L+ R ++++GL S
Sbjct: 463 LTNVMFITTANQLDPIPAPLKDRMEVITLSGYTDEEKLNIAKSYLVAREVEENGLASMAP 522
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
Q + + V YTREAGVRNL+RN+A++ R A +VA+ ++ +
Sbjct: 523 QFTDEAIYRVTHDYTREAGVRNLQRNIASICRKIAKEVAQGKKAR--------------- 567
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
PM +P V E +LG P+F D A+E+
Sbjct: 568 ----------------PM-------------VNPETVSE-----LLGAPKFFDEVASEKD 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G++ GL WT GG++ FVEAT M+GK +L LTG LG+V+KES + AL++V+A
Sbjct: 594 RV-GVATGLAWTESGGDIIFVEATKMKGKEDLILTGSLGEVMKESVRAALSFVKANC--- 649
Query: 694 QLVAEDGMN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
AE G++ + +HIH PAG++PKDGPSAG+T+ TA+VSLFS + R D AMTGE
Sbjct: 650 ---AEFGIDKKMFDETTLHIHVPAGSIPKDGPSAGITMATAIVSLFSGRAARRDVAMTGE 706
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
M+L G VL +GG+K+K+LAA R G+K+V+ P +N KDL ++P V LE + + +V
Sbjct: 707 MSLTGRVLAIGGLKEKVLAARRAGVKKVLAPAKNKKDLEDIPENVKNELEFFFVEDIREV 766
Query: 812 LEQAFEGGCP 821
QA P
Sbjct: 767 FVQALNPTSP 776
>gi|253575675|ref|ZP_04853011.1| ATP-dependent protease La [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251845013|gb|EES73025.1| ATP-dependent protease La [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 778
Score = 583 bits (1504), Expect = e-163, Method: Compositional matrix adjust.
Identities = 316/753 (41%), Positives = 463/753 (61%), Gaps = 65/753 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EG+ R + E YY + + E E V DP+ AL R
Sbjct: 84 PNG--TIRVLVEGMERAEIIEYLDNDEYYEV----IAEERPEEETV--DPEVDALMRTVL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
I++ K+ T + + +LAD+ + + +++ +L+++D++ RL
Sbjct: 136 TQFEHYINL--SKKVTPETLAAVSDIEEAGRLADVITSHLSLKIKDKQEILETIDVRKRL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K ++++ + + + KI Q+V+ Q+ K+QKE+ LR+QM+AI++ELG+ + +
Sbjct: 194 EKLLDILNNEREVLELERKINQRVKKQMEKTQKEYYLREQMKAIQKELGEKEGRAGEAEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L +++ G+P N+ + V+KE+ RL+KM R Y++ + LPW +E+ DLD
Sbjct: 254 LRAQLEEKGLPENVREKVEKEIDRLEKMPASSAEGGVIRNYVDWLLSLPWNNKTED-DLD 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L A++ L+ DHYGL + K+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA +
Sbjct: 313 LAKAEQVLNEDHYGLDKPKERVLEYLAVQKLVKKLKGPILCLVGPPGVGKTSLARSIARS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
LGR+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV LLDEIDK SD
Sbjct: 373 LGRQFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGTLNPVFLLDEIDKMASDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN TF+DH++ VPFDLS V+F+ TAN IP PLLDRME + +P
Sbjct: 433 RGDPSAALLEVLDPEQNNTFSDHFIEVPFDLSNVMFITTANAVHNIPRPLLDRMETLFIP 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EKL+IA R+L+P+ +HGL E L++ E ++ V++ YTRE+GVRNLE+ +AAL
Sbjct: 493 GYTELEKLQIANRYLLPKQKREHGLEPEQLEVGEDVLLQVVREYTRESGVRNLEQQVAAL 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA ++ + +E+ + ++ +V
Sbjct: 553 CRKAAKQIVSENKEKIIITTDNV------------------------------------- 575
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+ LGP +F AE G GL WT GGE +E T + G G
Sbjct: 576 ------------KDFLGPAKF-RYGVAELEDQIGTVTGLAWTEVGGETLVIEVTVVPGSG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A ++ R++A +L + ++ + DIHIH P GA+PKDGP
Sbjct: 623 KLTLTGKLGDVMKESAQAAFSYTRSKAAELGI----PLDFHEKNDIHIHIPEGAIPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + + V D AMTGE+TLRG VLP+GG+K+K LAAHR G ++V++P+
Sbjct: 679 SAGITIATALISALTNRHVSKDVAMTGEITLRGRVLPIGGLKEKSLAAHRAGYRKVLMPK 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N +DL ++P +V LE + M+ VLE A
Sbjct: 739 DNERDLRDIPDSVKEDLEFVPVSHMDQVLEHAL 771
>gi|197117085|ref|YP_002137512.1| ATP-dependent Lon protease [Geobacter bemidjiensis Bem]
gi|302425057|sp|B5EDX8.1|LON_GEOBB RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|197086445|gb|ACH37716.1| ATP-dependent Lon protease (La) [Geobacter bemidjiensis Bem]
Length = 794
Score = 583 bits (1504), Expect = e-163, Method: Compositional matrix adjust.
Identities = 304/668 (45%), Positives = 427/668 (63%), Gaps = 55/668 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+L+D+ + +E +L++VD RL K + +Q +++ ++ +V ++ K
Sbjct: 164 RLSDLVALYLNLPIDELQKLLETVDPLERLKKVYMHLTNEVQRLQIKGEVQAEVTKKVGK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQKEFLLR+QM+ I+EELG+ D + L K++SA MP ++ + +KE+RRL+++ P
Sbjct: 224 SQKEFLLREQMKQIQEELGEEDSRLGEANELRSKVESAHMPEDVRRIAEKEMRRLERINP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
P YT SR YL+ + +PW+ ++ + + D+ A+ L+ DHY L +VK+RI+EYLAVR
Sbjct: 284 ASPEYTVSRTYLDYLTTIPWQVSTPD-NRDINQAETILNEDHYDLKKVKERILEYLAVRS 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
LK +GP+LCFVGPPGVGKTSL SIA LGRKFIRISLGG++DEA+IRGHRRTYIG++
Sbjct: 343 LKDKMKGPILCFVGPPGVGKTSLGKSIARTLGRKFIRISLGGMRDEAEIRGHRRTYIGAL 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I + R G NPV +LDE+DK G+D RGDPASALLEVLDPEQN +F DHYL+VPFD
Sbjct: 403 PGRIIQEINRAGSNNPVFMLDEVDKIGADFRGDPASALLEVLDPEQNFSFTDHYLDVPFD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
L+ V+F+ TAN+ PIP PL DRMEVI L GYT EEKL IA +L+ R ++++GL S
Sbjct: 463 LTNVMFITTANQLDPIPAPLKDRMEVITLSGYTDEEKLNIAKSYLVAREVEENGLASMAP 522
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
Q + + V YTREAGVRNL+RN+A++ R A +VA+ ++ +
Sbjct: 523 QFTDEAIYRVTHDYTREAGVRNLQRNIASICRKIAKEVAQGKKARP-------------- 568
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
I +P V E +LG P+F D A+E+
Sbjct: 569 ------------------------------IVNPETVSE-----LLGAPKFFDEVASEKD 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G++ GL WT GG++ FVEAT M+GK +L LTG LG+V+KES + AL++V+A +L
Sbjct: 594 RV-GVATGLAWTESGGDIIFVEATKMKGKEDLILTGSLGEVMKESVRAALSFVKANCAEL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ + +HIH PAG++PKDGPSAG+T+ TA+VSLFS + R D AMTGEM+
Sbjct: 653 GI----DKKMFDETTLHIHVPAGSIPKDGPSAGITMATAIVSLFSGRAARRDVAMTGEMS 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
L G VL +GG+K+K+LAA R G+K+V+ P +N KDL ++P V LE + + +V
Sbjct: 709 LTGRVLAIGGLKEKVLAARRAGVKKVLAPAKNKKDLEDIPENVKNELEFFFVEDIREVFV 768
Query: 814 QAFEGGCP 821
QA P
Sbjct: 769 QALNPTSP 776
>gi|316933823|ref|YP_004108805.1| ATP-dependent protease La [Rhodopseudomonas palustris DX-1]
gi|315601537|gb|ADU44072.1| ATP-dependent protease La [Rhodopseudomonas palustris DX-1]
Length = 810
Score = 583 bits (1504), Expect = e-163, Method: Compositional matrix adjust.
Identities = 335/806 (41%), Positives = 474/806 (58%), Gaps = 81/806 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + I+ G A L L ++ P G V V++EGL R V + + R
Sbjct: 61 TQKNASDDDPAPDSIY--EIGTLASVLQL---LKLPDGTVK--VLVEGLARAKVDKYTDR 113
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLE 148
YY A +LE + D D + ++ + S ++ +K +++
Sbjct: 114 ADYYEAGAVALE---------DSDADSVEAEALSRSVVSDFESYVKLNKKISAEVVGVVQ 164
Query: 149 TVP-IHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKV 207
++ KLAD + + ++ +L+++ + RL K L++ + ++V ++I +V
Sbjct: 165 SITDFAKLADTVASHLAVKIADRQGILETLSVTQRLEKVLGLMESEISVLQVEKRIRSRV 224
Query: 208 EGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
+ Q+ K+Q+E+ L +QM+AI++ELGD +D D+L LE K+ + + Q EL++
Sbjct: 225 KRQMEKTQREYYLNEQMKAIQKELGD-EDGRDELAELEEKIAKTKLTKEAREKAQHELKK 283
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
L++M P T R YL+ + +PW K S+ + DL AA+ LDSDHYGL +VK+RI+E
Sbjct: 284 LRQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLGAAQAVLDSDHYGLEKVKERIVE 342
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRGHRR
Sbjct: 343 YLAVQSRANKLSGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRR 402
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TFNDHY
Sbjct: 403 TYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTFNDHY 462
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
L V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP+ L +HG
Sbjct: 463 LEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTETEKVEIARKHLIPQALTKHG 521
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L S+ I + + LVI+RYTREAGVRNLER ++ LAR +E L K VH
Sbjct: 522 LDSKEWSIDDDALLLVIRRYTREAGVRNLEREISTLARKVV-------KELMLSKKKSVH 574
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFD 625
++E ++E+ LG P RF
Sbjct: 575 ------------------------------------------INEKLIEEYLGVPKFRFG 592
Query: 626 DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTW 685
+ E ++V G+ GL WT+ GGE+ +E+ M GKG + +TG L DV+KES Q A ++
Sbjct: 593 EIEKDDQV---GVVTGLAWTDVGGELLTIESVMMPGKGRMTVTGNLRDVMKESIQAAASY 649
Query: 686 VRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRAD 745
VR+RA + + RDIH+H P GA PKDGPSAGV + T +VS+ + +R D
Sbjct: 650 VRSRAITFGIEPP----FFEKRDIHVHVPEGATPKDGPSAGVAMATTIVSVLTGIPIRRD 705
Query: 746 TAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILA 805
AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+P A+ L II
Sbjct: 706 IAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEIPDAIKGGLNIIPV 765
Query: 806 KRMEDVLEQAF-EGGCP--WRQHSKL 828
RM++V+ A P W + +KL
Sbjct: 766 ARMDEVIANALTRAPVPIVWEEDTKL 791
>gi|269836546|ref|YP_003318774.1| ATP-dependent protease La [Sphaerobacter thermophilus DSM 20745]
gi|269785809|gb|ACZ37952.1| ATP-dependent protease La [Sphaerobacter thermophilus DSM 20745]
Length = 837
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 326/761 (42%), Positives = 468/761 (61%), Gaps = 72/761 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V +G R + E Y TAR+ + E+VE + AL R +
Sbjct: 105 PDGTVRLAV--QGQRRMRIVEWLGEEPYLTARVEEIP------EEVEDTVEIKALVRNSQ 156
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
L+S++ + T L P+H L + ++ + EE+ +L+ ++ +L
Sbjct: 157 ELFQRLVSLVSNLPEEL-VTAALNVDDPLH-LVYLIASNLRMEAEERQALLELDSVRAKL 214
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
+ + + L + + +KI +V+ ++ K+Q+E+ LR+Q++AI+ ELG+ ++ E ++
Sbjct: 215 QRLNAFMSKELDLLELGKKIQSEVQEEVGKTQREYYLREQLKAIQRELGETNEQEAEINE 274
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K+ AGMP + ++EL RL K+ P Y R YL+ + LPW K+SEE +D
Sbjct: 275 LRAKIDEAGMPEEAEREARRELDRLSKLPPAAAEYGVIRTYLDWLTALPWNKSSEE-GID 333
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK--------PDARGPVLCFVGPPGVGKTS 355
+ A++ LD DHY L ++K+RI+EYLAVR+L+ D+R P+LCFVGPPGVGKTS
Sbjct: 334 VAKARQILDEDHYDLEKIKERILEYLAVRRLRQERGVDAEEDSREPILCFVGPPGVGKTS 393
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
LA SIA ALGR+F R+SLGGV+DEA+IRGHRRTYIG+MPGR+I ++R G +PV +LDE
Sbjct: 394 LAQSIARALGRRFTRMSLGGVRDEAEIRGHRRTYIGAMPGRIIQAIRRAGTNDPVFVLDE 453
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK G+D RGDP+SALLEVLDPEQN +F DHYL+VPFDLSKV+F+ATAN IP PL D
Sbjct: 454 IDKLGADWRGDPSSALLEVLDPEQNHSFRDHYLDVPFDLSKVMFIATANMLDTIPAPLRD 513
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+++L GYT EEKL IA ++L+P+ L +H L + + I + + +IQ YTREAGVRN
Sbjct: 514 RMEILQLSGYTDEEKLNIARKYLVPKQLKRHALSPDEVSISDEALLEIIQHYTREAGVRN 573
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER +A++AR A RLA+G E+
Sbjct: 574 LEREIASVARKVA---------------------------TRLAEGQEI----------- 595
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
P ++ + ++LG RF E +ER + PG+++G+ T GG++ F+E
Sbjct: 596 -----------PSTIEAEHIRELLGKRRFFYEELSERTSVPGVAIGVGVTPVGGDIMFIE 644
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
A+ M G+G L +TGQLGDV+KES+Q AL+ VRARA+D + + + D+H+H PA
Sbjct: 645 ASRMPGRGNLTVTGQLGDVMKESSQAALSLVRARASDFGI----DPDFFKESDLHVHVPA 700
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA+PKDGPSAGV + ALVSL + VR + AMTGE+TLRG VLPVGG+K+K LAA R G
Sbjct: 701 GAIPKDGPSAGVAMTVALVSLLTGIPVRDEVAMTGEITLRGQVLPVGGIKEKALAAARAG 760
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
I ILP+RN DL ++P ++ ++E +L +++ L A
Sbjct: 761 ITTFILPKRNEPDLDDLPPSLKENMEFVLVDSIDEALRVAM 801
>gi|158521867|ref|YP_001529737.1| ATP-dependent protease La [Desulfococcus oleovorans Hxd3]
gi|158510693|gb|ABW67660.1| ATP-dependent protease La [Desulfococcus oleovorans Hxd3]
Length = 820
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 296/664 (44%), Positives = 425/664 (64%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
KLAD+ ++ ++ +E +L+ D RL K +E++ + + V KI V+ ++SK
Sbjct: 182 KLADLIASNLKLKTDEAQQILELADPIDRLKKISEVLSKEIHLSTVQAKIHSNVKDEISK 241
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+++ LR+QMRAI +ELG++D+ ++ ERK++ A MP K K+L+RL +M P
Sbjct: 242 SQRDYYLREQMRAIHKELGESDERSQEMDDYERKIKKARMPKEAKKEADKQLKRLGQMHP 301
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
+ R YL+ + ++PW S+++ LD+K A++ L+ DHYGL +VK RI+E+L+VRK
Sbjct: 302 DSSEASIVRTYLDWLVEMPWSNFSKDL-LDIKKAQKVLNDDHYGLEKVKDRILEHLSVRK 360
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L P+ +GP+LCF+G PGVGKTSL SIA A+GRKF+RISLGGV+DEA+IRGHRRTYIG+M
Sbjct: 361 LNPEMKGPILCFIGAPGVGKTSLGKSIARAMGRKFVRISLGGVRDEAEIRGHRRTYIGAM 420
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I GLK+ G NPV ++DEIDK GSD RGDP++ALLE LDPEQN F+DHYLN+ FD
Sbjct: 421 PGRIIQGLKQCGTSNPVFVMDEIDKMGSDFRGDPSAALLEALDPEQNTDFSDHYLNLSFD 480
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+F+ TAN+ IP L DRME+I +PGY+ +EKL IA ++LIPR + ++GL +
Sbjct: 481 LSKVLFILTANQPDTIPSALYDRMEIINIPGYSEDEKLIIAEKYLIPRQIKENGLKKTDI 540
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ +I +YT E+G+RNLER LA L R A ++AE +++ +
Sbjct: 541 SFSRQALSAIINQYTSESGLRNLERELATLCRKVARRIAEGNRKKHM------------- 587
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
+ + LEK LG P+F E +
Sbjct: 588 ------------------------------------ITVSSLEKYLGVPKFIP-EMDQEE 610
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
+ G++ GL WT GGE +VEA+ GKGEL LTGQLG+V++ESA+ AL++ +A
Sbjct: 611 SQVGLATGLAWTQCGGEAMYVEASLFTGKGELILTGQLGEVMQESARAALSYAKANMKQF 670
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
L D L+ D+HIH PAGA+PKDGPSAGV + AL+S + ++ D AMTGE+T
Sbjct: 671 GLRHND----LENVDVHIHVPAGAIPKDGPSAGVAMAAALISALTGAPIKNDVAMTGEIT 726
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K L A R GIK +++PE+N K++ E+P + +E + M+ V++
Sbjct: 727 LRGRVLPIGGIKEKTLGALRAGIKTILVPEKNRKEVSEIPNHIARKIEFVFTDSMDKVID 786
Query: 814 QAFE 817
AFE
Sbjct: 787 LAFE 790
>gi|224825920|ref|ZP_03699024.1| ATP-dependent protease La [Pseudogulbenkiania ferrooxidans 2002]
gi|224602144|gb|EEG08323.1| ATP-dependent protease La [Pseudogulbenkiania ferrooxidans 2002]
Length = 809
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 341/801 (42%), Positives = 476/801 (59%), Gaps = 86/801 (10%)
Query: 28 KVQVGASDGKNQQEVIHW-HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELS 86
K +VG SD ++W G+ AR + G + +V++GL RF V E
Sbjct: 91 KTEVGPSD-------LYWVGTAGLIARYITGKEGADH--------LVVQGLSRFQVLEFL 135
Query: 87 TRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVL 146
+ AR++ + + EM E + F+ Q K A+E I +L G V+
Sbjct: 136 DGWPFLVARVALI--AQPEMMTPEIEARFL----QLKERAIEAIGLL--PHMPGELNDVV 187
Query: 147 LETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQK 206
LAD+ ++ EE+ +L++ DL RL K L+ ++ ++++ +I +K
Sbjct: 188 RGIDSPAALADMVANLIDVKVEEKQDILETFDLLRRLDKVLALLSARVEVLKLSREIGEK 247
Query: 207 VEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELR 266
Q + Q+E +LR+QMR I++ELG++++ ++ L++ + +AGMP + KH +KEL+
Sbjct: 248 TRAQFDERQREHMLREQMRQIQKELGEDEESAVEIEELKQAVATAGMPPEVQKHAEKELK 307
Query: 267 RLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRII 326
RL+++ Y R YLE + +LPW KA +D+ AA+ LD DH+GL ++K+RI+
Sbjct: 308 RLQRVGEGGTEYAMLRTYLEWLTELPW-KAEAPQPIDIAAARHVLDEDHFGLDKIKRRIL 366
Query: 327 EYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHR 386
EYLAVRKL P+ + P+LCF GPPGVGKTSL SIA A GR F R++LGG+ DEA+IRGHR
Sbjct: 367 EYLAVRKLNPEGKSPILCFSGPPGVGKTSLGQSIARATGRAFQRVALGGLHDEAEIRGHR 426
Query: 387 RTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGS-DVRGDPASALLEVLDPEQNKTFND 445
RTYIG++PG +I L+R G + V++LDEIDK G+ GDP SALLEVLDPEQN+TF D
Sbjct: 427 RTYIGALPGNIIQALRRAGTTHTVLMLDEIDKLGAGGFHGDPGSALLEVLDPEQNRTFRD 486
Query: 446 HYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQ 505
+YL V FDLS+V+FV TAN IP PL DRME+I+LPGYT EEK+ IA R+L+ R L+
Sbjct: 487 NYLGVDFDLSRVMFVCTANVLDTIPGPLRDRMEIIQLPGYTEEEKIEIARRYLVRRQLEA 546
Query: 506 HGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKD 565
+GL +E + +A + +++ YTREAGVRNLER L ++ R A+++AE E
Sbjct: 547 NGLTTEQAGLTDAALTAIVRDYTREAGVRNLERELGSVLRRVAMRIAEGLAE-------- 598
Query: 566 VHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD 625
R+T VD A L +LG R++
Sbjct: 599 -------------------------------------RVT----VDAADLADILGAQRYE 617
Query: 626 DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTW 685
E A R + PG++ GL WT GG++ F+EA+ + G G L LTGQLG+V+KESAQ ALT
Sbjct: 618 S-EVALRTSLPGVATGLAWTPVGGDILFIEASKVPGSGRLILTGQLGEVMKESAQAALTL 676
Query: 686 VRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRAD 745
+ D L G D+H+H PAGA PKDGPSAGV + ALVSL + K VR+D
Sbjct: 677 AKIWTGD----------SLAGIDVHVHVPAGATPKDGPSAGVAMFLALVSLLTDKPVRSD 726
Query: 746 TAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILA 805
AMTGE++LRGLVLP+GGVK+K LAA R GI V+LP RN KDL +VPA A L+ +L
Sbjct: 727 VAMTGEVSLRGLVLPIGGVKEKTLAALRAGIHTVMLPRRNQKDLEDVPAEARAKLQFVLL 786
Query: 806 KRMEDVLEQAFEGGCPWRQHS 826
R+ED + A P Q S
Sbjct: 787 DRVEDAVRFAIGDVAPDHQDS 807
>gi|77164885|ref|YP_343410.1| peptidase S16, ATP-dependent protease La [Nitrosococcus oceani ATCC
19707]
gi|254434556|ref|ZP_05048064.1| ATP-dependent protease La [Nitrosococcus oceani AFC27]
gi|123594373|sp|Q3JBB6.1|LON_NITOC RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|76883199|gb|ABA57880.1| Peptidase S16, ATP-dependent protease La [Nitrosococcus oceani ATCC
19707]
gi|207090889|gb|EDZ68160.1| ATP-dependent protease La [Nitrosococcus oceani AFC27]
Length = 772
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 317/749 (42%), Positives = 471/749 (62%), Gaps = 64/749 (8%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T ++++G+ R E+ + Y + +I++L E + + AL R A +
Sbjct: 82 TVQILVQGIERVEQLEMVQKQPYLSLKIATLS------EPSDTGTEIEALHRTVIELAGK 135
Query: 129 LISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATE 188
+I +++ + + G + P+H++ + + + F+++ +L + L
Sbjct: 136 MIELVQPQIQVGIHHIISDVEKPLHQIY-LLTSILSLDFDKEKELLAAATQVEALQLMHR 194
Query: 189 LVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKM 248
++ +Q + V +KIT + ++ K Q+E++LRQQ+ AI+EELG+ + ++ ++ L ++M
Sbjct: 195 YLNHEVQVLEVRQKITSTAQTEIDKKQREYVLRQQLEAIQEELGETNPEQAEIKELRQRM 254
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAK 308
+ +P + K V+KE+ RL++M P Y +R Y+EL +LPW K +E+ LDLK A+
Sbjct: 255 EETELPELVRKEVEKEITRLERMPSAAPDYQLTRGYVELALELPWNKTTED-RLDLKRAR 313
Query: 309 ERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF 368
E LD DH+ L VK+RIIE+LAV KL P+A+ P+LCFVGPPGVGKTS+ S+A ALGRKF
Sbjct: 314 EILDEDHFDLEDVKERIIEHLAVMKLNPEAKSPILCFVGPPGVGKTSVGQSMARALGRKF 373
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
R+SLGG+ DE+++RGHRRTYIG+MPGR+I ++R G NP+++LDEIDK G D RGDPA
Sbjct: 374 ERMSLGGLHDESELRGHRRTYIGAMPGRIIRAIRRTGYQNPLLMLDEIDKLGRDFRGDPA 433
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
+ALLE+LDP QN F+D+YL++PFDLSK+ FV TAN IP PLLDRME++ LPGY+ E
Sbjct: 434 AALLEILDPAQNAEFHDNYLDLPFDLSKIFFVTTANTLDTIPRPLLDRMEILRLPGYSDE 493
Query: 489 EKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA 548
EK IA R+LI R + + GL L IP+ + +I+RYTREAGVR LER L +AR A
Sbjct: 494 EKQHIARRYLIGRQIREAGLSEIQLSIPDETLSYLIRRYTREAGVRELERMLGRIARKVA 553
Query: 549 VKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPL 608
+VA + + + +D
Sbjct: 554 TQVATGQTQPVTVTPQD------------------------------------------- 570
Query: 609 VVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAM-RGKGELHL 667
L ++LGP RF E +++ APG++ GL WT GG+V +VEA + GKG + L
Sbjct: 571 ------LVELLGPERFFAEEMRQQL-APGVAAGLAWTEAGGDVLYVEAALLPEGKG-MTL 622
Query: 668 TGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGV 727
TGQLG +++ESA+ A +++ +RA +L + ++ +HIH PAGA+PKDGPSAGV
Sbjct: 623 TGQLGSIMQESAKAAQSYLWSRAEELNI----DQKTIRESGVHIHVPAGAIPKDGPSAGV 678
Query: 728 TLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLK 787
T+ +AL S ++ + VR+DTAMTGE+TL GLVLPVGG+K+K+LAAHR GI+R+ILP+ N K
Sbjct: 679 TMASALTSAYAHQPVRSDTAMTGEITLSGLVLPVGGIKEKVLAAHRSGIQRIILPKENEK 738
Query: 788 DLVEVPAAVLASLEIILAKRMEDVLEQAF 816
DL E+P V S++ ILA+R+E+VL +A
Sbjct: 739 DLREIPEHVRQSIQFILARRIEEVLAEAI 767
>gi|225850709|ref|YP_002730943.1| ATP-dependent protease La [Persephonella marina EX-H1]
gi|225646048|gb|ACO04234.1| ATP-dependent protease La [Persephonella marina EX-H1]
Length = 801
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 335/811 (41%), Positives = 483/811 (59%), Gaps = 106/811 (13%)
Query: 40 QEVIHWHNRGVAARALHLSRGVEKPS-------GRVTYI------------VVLEGLCRF 80
+E I H+R + AL + +E+P+ G V I ++++G+ R
Sbjct: 50 EEAIESHDRYIFL-ALQKDKDIEEPTKDDLYEIGTVATILRMMKLEDDRIKILVQGVARG 108
Query: 81 SVQELSTRGTYYTARISSLEMTKIEMEQVEQDP----------DFIALSRQFKATAMELI 130
++E Y ++ LE K E +E + IAL +Q +E+I
Sbjct: 109 KIKEFIKEDNLYKVKLEVLEEPKPPEENIEVEALIHSIKDLLDKSIALGKQVLPDLVEII 168
Query: 131 SVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
LE+ KL+D+ + ++ + +L+ VD RL +L
Sbjct: 169 RTLEEP----------------GKLSDLVASILDLKSPDAQKILEIVDPVERLRYVHDLF 212
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
+ + + + KI + K Q+E+ LRQQ++AI+EELG+ D+ ++++ +K++
Sbjct: 213 IKEVGLLEIQHKIRTAARESMEKDQREYFLRQQIKAIQEELGEKDERQEEVEQYRKKIEE 272
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
AGMP ++ + +K+L+RL+KM P R YL+ + +LPW K +++ LDLK AK
Sbjct: 273 AGMPEDVREEAEKQLKRLEKMHPDSAEAGVIRTYLDWLVELPWSKRTKD-KLDLKRAKRI 331
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDA--RGPVLCFVGPPGVGKTSLASSIASALGRKF 368
LD DHY L +VK+RI+EYLAV+KLK + +GP+LCFVGPPGVGKTSL SIA +LGRKF
Sbjct: 332 LDEDHYDLEKVKERILEYLAVQKLKKEKSMKGPILCFVGPPGVGKTSLGKSIARSLGRKF 391
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
+R SLGGV+DEA+IRGHRRTY+G++PGR+I +K+ G NPV++LDE+DK SD RGDPA
Sbjct: 392 VRQSLGGVRDEAEIRGHRRTYVGALPGRIIQAIKQAGTKNPVIMLDEVDKLASDFRGDPA 451
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
SALLEVLDPEQN+ F DHYL VPFDLS+V+F+ TANR IP PLLDRMEVI +PGY+ E
Sbjct: 452 SALLEVLDPEQNREFTDHYLGVPFDLSEVMFICTANRIDTIPRPLLDRMEVIRIPGYSEE 511
Query: 489 EKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA 548
EKL IA +LIPR L ++GL ++++ ++ ++ +I+ YTREAGVR+LER + A+ R A
Sbjct: 512 EKLYIAKNYLIPRQLKENGLSQKYVEFTDSGLRFLIRHYTREAGVRSLERQINAVLRKIA 571
Query: 549 VKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPL 608
+E AL K +RIT L
Sbjct: 572 -------KEIALKGKK-----------------------------------KKYRITKSL 589
Query: 609 VVDEAMLEKVLGPPRF-DDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHL 667
V +K LG P + ++E ++ + G+ GL WT GGE+ +EAT M GKG+L L
Sbjct: 590 V------KKFLGAPLYMPEKEKSDEI---GVVTGLAWTEVGGEILKIEATRMPGKGQLIL 640
Query: 668 TGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGV 727
TG LGDV+KESA AL++V++++ + + ED Q D H+H PAGA+PKDGPSAG+
Sbjct: 641 TGSLGDVMKESAMTALSYVKSKSEEYGIDPED----FQKYDTHVHVPAGAIPKDGPSAGI 696
Query: 728 TLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLK 787
++ TA+ SLF VRAD AMTGE+TLRG VLPVGG+K+KILAA R IK VILP+ N
Sbjct: 697 SIATAICSLFMNLPVRADVAMTGEITLRGKVLPVGGLKEKILAAKRAEIKDVILPKDNKD 756
Query: 788 DLVE-VPAAVLASLEIILAKRMEDVLEQAFE 817
+++E +P ++ +I ++ V + A +
Sbjct: 757 EVMEDLPPFARKNINLIFVDHIDQVFKIAIK 787
>gi|118581608|ref|YP_902858.1| ATP-dependent protease La [Pelobacter propionicus DSM 2379]
gi|118504318|gb|ABL00801.1| ATP-dependent protease La [Pelobacter propionicus DSM 2379]
Length = 771
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 338/799 (42%), Positives = 477/799 (59%), Gaps = 76/799 (9%)
Query: 22 SSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFS 81
+ E V + D + + + + G R +++ G + V +EGL R
Sbjct: 45 TQENLVAVVLRNGDATGNGQTLDYRSIGTLCRITKITK-----IGDTKFKVTMEGLNRLR 99
Query: 82 VQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGG 141
+ EL T GT A ++ E VE+ AL + A+ IS+ K
Sbjct: 100 ILELDTSGTVPQAH------CELVREFVEKGMVSDALVQSL--NALLKISLSHGKPLPDD 151
Query: 142 RTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAE 201
K++ +L+D+ + E +L++ D RL K + +Q ++V
Sbjct: 152 VMKMIDYIDNPARLSDLVALYVNLPLEGLQELLETTDPLERLKKVYVYLTNEVQRLQVKS 211
Query: 202 KITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHV 261
+I +V ++ K+QKE++LR+QM+ I++ELG+ D D+ L ++++ AG+P ++ K
Sbjct: 212 EINTEVNRKVGKNQKEYILREQMKHIQDELGEEDARTADMNDLRKRIEEAGLPEDVHKIA 271
Query: 262 QKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEID-LDLKAAKERLDSDHYGLVR 320
KEL+RL+++ P YT SR YL+ +A +PW ++ ID LD+ A+E L+ DHY L +
Sbjct: 272 VKELKRLERINQASPEYTVSRTYLDYLAGMPWNSST--IDSLDIIRAEEILNEDHYDLKK 329
Query: 321 VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEA 380
+K+RI+E+LAVR LK D +GPVLCFVGPPGVGKTSL SIA +LGRKF+RISLGG++DEA
Sbjct: 330 IKERILEFLAVRSLKDDMKGPVLCFVGPPGVGKTSLGKSIARSLGRKFVRISLGGMRDEA 389
Query: 381 DIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQN 440
+IRGHRRTYIG++PGR+I + R G NPV +LDEIDK G D RGDPASALLEVLDPEQN
Sbjct: 390 EIRGHRRTYIGALPGRIIKEIFRCGSNNPVFMLDEIDKLGQDFRGDPASALLEVLDPEQN 449
Query: 441 KTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIP 500
+F DHYL+VPFDLSKV+F+ TAN+ PIP PL DRMEVI L GY+ EEKL IA ++
Sbjct: 450 FSFQDHYLDVPFDLSKVMFITTANQLDPIPGPLKDRMEVIRLAGYSTEEKLHIARNFIVR 509
Query: 501 RVLDQHGLGS---EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQE 557
R ++++GL EFL A+VK+V YTREAGVRN++R +A + R A ++ +++
Sbjct: 510 REIEENGLKEMQPEFLD--NAIVKIV-SDYTREAGVRNMQRTIATICRKVAKEITQKKP- 565
Query: 558 QALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEK 617
L +P+ +P VV E
Sbjct: 566 -----------LRTPI--------------------------------TPEVVAE----- 577
Query: 618 VLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKE 677
+LGP +F + AAE G+ G+ WT GG++ FVE T+M GK EL LTG LGDV+KE
Sbjct: 578 LLGPRKFHNEVAAENDRI-GVVTGMAWTESGGDILFVEVTSMPGKAELILTGSLGDVMKE 636
Query: 678 SAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLF 737
SA+ AL+++ A A D + + + R IH+H P+GA+PKDGPSAGVT+VTALVSL
Sbjct: 637 SARAALSYIEAHAVDFGIEP----SAFENRGIHVHVPSGAIPKDGPSAGVTIVTALVSLL 692
Query: 738 SRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVL 797
+ K R D AMTGE+TL G VL +GG+K+K+LAAHR G+++++ PERN DL ++P V
Sbjct: 693 TGKPARRDVAMTGEITLTGRVLAIGGLKEKVLAAHRAGVRKIVAPERNRDDLEDIPDNVR 752
Query: 798 ASLEIILAKRMEDVLEQAF 816
LE I + LE A
Sbjct: 753 NDLEFIFINEAREALEAAL 771
>gi|451979978|ref|ZP_21928380.1| ATP-dependent protease La [Nitrospina gracilis 3/211]
gi|451762850|emb|CCQ89598.1| ATP-dependent protease La [Nitrospina gracilis 3/211]
Length = 813
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 318/757 (42%), Positives = 453/757 (59%), Gaps = 77/757 (10%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T V++EG+ R + Y+ I +E E ++ PD AL R +
Sbjct: 84 TMKVLVEGVQRGRIISFQDNPNYHEVEIVRIE------ENIQVVPDVKALMRSIE----- 132
Query: 129 LISVLEQKQKTGGRTKVLLETVPI-------HKLADIFVASFEISFEEQLVMLDSVDLKV 181
++ EQ K K+ LE + H+ AD + E+ +LD+
Sbjct: 133 --NLFEQYVKLN--QKIPLEAISAIANIAEPHRFADTIASYMVFQTSEKQELLDTYSPVD 188
Query: 182 RLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDL 241
RL+K + ++ +++ +++ +V Q+ +SQKEF L +QM+AI++ELG D+ + D+
Sbjct: 189 RLNKLISSLKSEMEILKIEKRVHGRVRKQMERSQKEFYLNEQMKAIQKELGKRDEFKSDI 248
Query: 242 VALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEID 301
L +K++ A MP ++ + KE+RRL+ MQP T R Y++ + D+PW+K
Sbjct: 249 DELTQKIKKAKMPKDVQEKAMKEVRRLEIMQPMSAEATVVRNYIDWLVDIPWQKGKNSDK 308
Query: 302 LDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIA 361
+++K A++ LD DHYGL +VK+RI+E+LAV KL +GP+LC VGPPGVGKTSL S+A
Sbjct: 309 INIKEAQKILDGDHYGLEKVKERIVEHLAVMKLVKKIKGPILCLVGPPGVGKTSLGKSVA 368
Query: 362 SALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGS 421
A GR+F+R+SLGGV+DEA+IRGHR+TYIGS+PG++I +K+ G NPV LLDE+DK
Sbjct: 369 RATGREFVRVSLGGVRDEAEIRGHRKTYIGSLPGKIIQSMKKAGTTNPVFLLDEVDKMSM 428
Query: 422 DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIE 481
D RGDP+SALLEVLDPEQN +FNDHYL + +DLS+V+F+ TAN IP PL DRME+I
Sbjct: 429 DFRGDPSSALLEVLDPEQNVSFNDHYLEIDYDLSQVLFICTANVLHAIPQPLQDRMEIIR 488
Query: 482 LPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLA 541
+PGYT +EKL IA LIP+ L +HGL + L I E + +IQ YTREAGVR+LER +
Sbjct: 489 IPGYTEQEKLAIAQNFLIPKKLKEHGLTKKQLTISELSLTKLIQEYTREAGVRSLEREIG 548
Query: 542 ALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNT 601
+L R A+KV E+ G + ++V P
Sbjct: 549 SLCRKTAMKVVEE--------------------------GKKTVIDVKPQ---------- 572
Query: 602 FRITSPLVVDEAMLEKVLGPPRF-DDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
L K+LG P++ DRE + A G++ GL WT FGGE+ +E +
Sbjct: 573 ------------TLSKLLGVPKYPGDRERDK--AEIGVATGLAWTEFGGEMLNIEVSVTP 618
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPK 720
GKG + TG+LGDV+KES Q A+++VR R+ L L + N G DIH+H P GA+PK
Sbjct: 619 GKGLVISTGKLGDVMKESVQAAMSYVRKRSDQLGLKS----NFHMGVDIHVHIPEGAIPK 674
Query: 721 DGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVI 780
DGPSAG+T+ AL+S + R+D MTGE+TL G VLP+GG+K+K LAAHR I+ VI
Sbjct: 675 DGPSAGITIAVALISALTGNVPRSDICMTGEITLTGKVLPIGGLKEKALAAHRMKIENVI 734
Query: 781 LPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+P+ N KDL ++P + L I + M+DVLE +FE
Sbjct: 735 IPKDNEKDLPDIPEIIRKKLNFISVETMDDVLEHSFE 771
>gi|156742142|ref|YP_001432271.1| ATP-dependent protease La [Roseiflexus castenholzii DSM 13941]
gi|156233470|gb|ABU58253.1| ATP-dependent protease La [Roseiflexus castenholzii DSM 13941]
Length = 821
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 314/663 (47%), Positives = 424/663 (63%), Gaps = 57/663 (8%)
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LAD S + +FEE+ +L+++D+ RL K + L + + ++ Q+V+ ++
Sbjct: 170 LADNTGYSPDYTFEERQDLLETLDVVERLRKVLAFYRKQLALMDIQARLRQEVQDAAARQ 229
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
Q+EF LRQQ+RAI++ELG++ +ED+L L K+++A + K +EL RL +M
Sbjct: 230 QREFYLRQQLRAIQKELGEDTTEEDELAELREKLEAANLTPAARKEADRELHRLSRMNSA 289
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
P Y R YLE +A+LPW K + +D+ ++ LD DHYGL +K+RI+EYLA+++
Sbjct: 290 SPEYQMVRTYLEWMAELPWNKTTG-APIDIAHTRQVLDEDHYGLHAIKERILEYLAIQQR 348
Query: 335 KPD------ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRT 388
+ R P+L FVGPPGVGKTSL SIA ALGR+F R+SLGGV+DEA++RG RRT
Sbjct: 349 RQHLMKEERVREPILAFVGPPGVGKTSLGQSIARALGRQFARMSLGGVRDEAELRGFRRT 408
Query: 389 YIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL 448
YIGS PGRLI L+R G +PV+LLDEIDK G D RGDPA+ALLEVLDPEQN TF DHYL
Sbjct: 409 YIGSQPGRLIQELRRAGTSDPVLLLDEIDKLGHDYRGDPAAALLEVLDPEQNDTFTDHYL 468
Query: 449 NVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGL 508
NVPFDLSKV+F+ATAN +PP L DRMEVIEL GYT +EK+ IA RHLIP+ L +GL
Sbjct: 469 NVPFDLSKVLFIATANTMDTVPPALRDRMEVIELSGYTGDEKVHIAQRHLIPKQLRANGL 528
Query: 509 GSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR 568
E + E ++++I YTREAGVRNLER + A+ R ++ E+
Sbjct: 529 RPEEVIFEEEALRILIHDYTREAGVRNLERQIGAVLRKVTRRLVEE-------------- 574
Query: 569 LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDRE 628
P G ++P+ +D A + + LG PRF + E
Sbjct: 575 ---------------------PSGAG----------STPVRIDGAFVRQALGRPRFFN-E 602
Query: 629 AAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRA 688
A ER+ PG++ GLVWT GG++ FVEA+ + G EL LTGQLGDV++ESA+ ALT+VR+
Sbjct: 603 ARERIDQPGVATGLVWTPSGGDIVFVEASVVEGSRELRLTGQLGDVMRESAEAALTYVRS 662
Query: 689 RATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAM 748
RA L + + IHIH P GAVPKDGPSAG+T+ TAL S + + VR D AM
Sbjct: 663 RAHTLGI----DPHFFDRHAIHIHVPGGAVPKDGPSAGITMATALASAATGRLVRDDVAM 718
Query: 749 TGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRM 808
TGE+TLRG VLPVGGVK+K+L AHR GI +ILP RN DL ++P+ V +L + + +
Sbjct: 719 TGEITLRGRVLPVGGVKEKVLGAHRAGIGTIILPRRNEVDLDDLPSDVREALTFVPVETL 778
Query: 809 EDV 811
++V
Sbjct: 779 DEV 781
>gi|406895540|gb|EKD40077.1| hypothetical protein ACD_75C00185G0012 [uncultured bacterium]
Length = 774
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 319/759 (42%), Positives = 462/759 (60%), Gaps = 75/759 (9%)
Query: 68 VTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTK---IEMEQVEQDPDFIALSRQFKA 124
T V L+G+ R + EL +R ++ AR+ S+ M + IE E +E++ +AL+ ++ A
Sbjct: 85 TTVQVFLQGIERIEITELLSRDSFLMARVRSIPMGRDQGIETEAMERE--ILALAEKYFA 142
Query: 125 TAMEL--ISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
A +S+ + G + ++ + +L + VA + +L++ L
Sbjct: 143 LAHPSHDVSIPQVVPPEGDFSPIVYS---LGQLLGLPVA-------RRQALLEASTLTAA 192
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
+ E ++ +Q + V +KI+ + + ++SK+Q+E++LR+Q+ AI++ELG+++ E +
Sbjct: 193 MQLLEEHLNHEIQILEVRKKISDQAQSKISKNQREYILREQLEAIQKELGESNPTESEFA 252
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
L+ K + +P I+ V+K+ +RL+++ P Y +R ++EL+ DLPW+ A+E+ +L
Sbjct: 253 KLKSKFDACKLPEAIYDEVKKDFQRLQQIPTMSPEYQVARSHMELVLDLPWDSATED-NL 311
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
DL A+ LD+DHYGL +K+RIIE LAV KL P A+ P+LCFVGPPGVGKTSL SIA
Sbjct: 312 DLNNARNVLDADHYGLKDIKERIIEQLAVMKLNPGAKSPILCFVGPPGVGKTSLGQSIAR 371
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
+LGRKF R SLGG+ DEA++RGHRRTYIG+MPGR+I L+R GV NP+++LDEIDK G D
Sbjct: 372 SLGRKFERFSLGGMSDEAELRGHRRTYIGAMPGRIIQALRRSGVRNPLVMLDEIDKLGRD 431
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
RGDPA+AL+E+LDP QN TF D+YL++PFDLS+V F+ TAN IP PL DRME + +
Sbjct: 432 FRGDPAAALMEILDPAQNCTFRDNYLDLPFDLSRVFFIVTANTVDTIPKPLFDRMETLHI 491
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GY EEK IA+++LIPR + GL E IP+A + +I RYTREAGVR LER +
Sbjct: 492 SGYGEEEKKEIAIQYLIPRQRSEAGLTGEQFCIPDATLASIIHRYTREAGVRELERMIGK 551
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
LAR A++ AEQ
Sbjct: 552 LARKVAIRFAEQ------------------------------------------------ 563
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
IT P+ + L K+LGP RF E R PG++ GL WT GG+V +VE + K
Sbjct: 564 -ITDPVTIGNEDLAKMLGPERF-FIEKLRRTLPPGVATGLAWTESGGDVLYVEVINLPYK 621
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
+ LTG LG+V+KESA A +++++++ L L G +HIH PAGA+PKDG
Sbjct: 622 ESITLTGHLGEVMKESAIAAASYLQSQSGQLHLEIPAGA-------VHIHVPAGAIPKDG 674
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAG+T+ AL SL+S R+DTAMTGE+TL GLVLPVGG+K+K+LAA R I R+ILP
Sbjct: 675 PSAGLTMAAALASLYSGLPTRSDTAMTGEITLSGLVLPVGGIKEKVLAARRADIHRIILP 734
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
N KDL E+P ++A++E + +E+ L G P
Sbjct: 735 AENKKDLQELPDYIMAAMEFVFVGSIEEALAAVIPGLMP 773
>gi|390934518|ref|YP_006392023.1| ATP-dependent protease La [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570019|gb|AFK86424.1| ATP-dependent protease La [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 772
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 315/748 (42%), Positives = 464/748 (62%), Gaps = 64/748 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R ++ L + ++Y + + KI++E VE+D + AL R + E IS
Sbjct: 86 VLVEGISRAELKNLISDESFYEVEV----LEKIDLE-VEKDSELEALMRSVTSAFEEYIS 140
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
+ + V +E +LAD+ ++ ++ +L+ D + RL K +
Sbjct: 141 ISSKIPLDSIYNVVTIEEP--GRLADVIAEHLSLNQDKNQELLECFDPRERLEKLLGFIL 198
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ L + + +KI +V Q+ KSQ+E+ LR+Q++AI+ ELG+ D+ + ++ E K++S
Sbjct: 199 KELDILEIEKKINMRVHKQIDKSQREYYLREQLKAIRAELGEADEIDQEIDEYEEKIESK 258
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
+P + + ++ELRRL +M P + R Y++ + DLPW + ++++ LD+K A++ L
Sbjct: 259 DLPDYVKEKAREELRRLSRMGPGYQEASVIRTYIDWLLDLPWNEETKDV-LDIKRAEKIL 317
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
+ DHYGL +VK+RI+E+LAVR + P+LC VGPPGVGKTSL SIA A+ RKF+R+
Sbjct: 318 NEDHYGLKKVKERILEFLAVRSFHEKMKSPILCLVGPPGVGKTSLGKSIARAMNRKFVRL 377
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGV+DEA+IRGHRRTY+G++PG +I+ LK G NPV LLDEIDK SD RGDPASA+
Sbjct: 378 SLGGVRDEAEIRGHRRTYVGAIPGGIINSLKIAGSKNPVFLLDEIDKMSSDFRGDPASAM 437
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQN T+ DHY+++PFDLSKV+FV TAN +P PLLDRMEVI + GYT EEKL
Sbjct: 438 LEVLDPEQNSTYRDHYIDLPFDLSKVLFVTTANTLDTVPAPLLDRMEVIYISGYTEEEKL 497
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
IA +LIP++L +HG + ++I ++ + +I YTREAGVR+LE+N+A + R + +
Sbjct: 498 NIAKEYLIPKILKEHGANEDIIKIQDSAIVGIISEYTREAGVRSLEQNIAKVVRKSIKAI 557
Query: 552 AEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
E +++ K++ + LG P+ +R V
Sbjct: 558 VENKEKSIKVGKKNLQKYLGKPI----------------------------YR------V 583
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
D+A L+ + G+ GL WT GG+ VEAT M G G+L LTGQ
Sbjct: 584 DKANLKDKV-----------------GMVTGLAWTRVGGDTLTVEATTMPGSGKLTLTGQ 626
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESAQ +++R+ A L + ++ NL DIHIH P GA+PKDGPSAGVT+V
Sbjct: 627 LGDVMKESAQAGFSYIRSNADALGIDSDFYKNL----DIHIHVPEGAIPKDGPSAGVTMV 682
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TA+VS + V+ D AMTGE+TL G VLP+GG+K+K+LAAHR GI +VI PE N +DL
Sbjct: 683 TAMVSAIKKVPVKGDIAMTGEITLTGKVLPIGGLKEKVLAAHRAGIFKVIAPEDNKRDLD 742
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEG 818
E+P +V +E +++VL+ + G
Sbjct: 743 EIPQSVKKKMEFKFVSNIDEVLKLSLVG 770
>gi|271499599|ref|YP_003332624.1| ATP-dependent protease La [Dickeya dadantii Ech586]
gi|270343154|gb|ACZ75919.1| ATP-dependent protease La [Dickeya dadantii Ech586]
Length = 787
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 330/767 (43%), Positives = 467/767 (60%), Gaps = 82/767 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPAIEEREQEVLMRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVTERLEYLMAMMESEIDLLQVEKRIRSRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK++SA MP + + EL++L+ M P T R Y++ + +PW+
Sbjct: 246 DAPDEQEALKRKIESANMPKEAREKAEAELQKLRMMSPMSAEATVVRSYIDWMVQVPWQ- 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LDSDHYGL RVK+RI+EYLAV+ RGP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLVKAQEMLDSDHYGLERVKERILEYLAVQSRVSKIRGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIARQHLLPKQIERNALKKGELTVEDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + S ++D + ++ G++
Sbjct: 544 LEREISKLCRKA---------------------VKSLMMDKAIK-------HILITGDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
L++ LG R+D A E G GL WT GG++ +E
Sbjct: 575 -------------------LKEYLGVQRYDYGRADEENRV-GQVTGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
++ GKG+L TG LG+V++ES Q ALT VRARA L + + + + RDIH+H P
Sbjct: 615 TASVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINS----DFYEKRDIHVHVPE 670
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR G
Sbjct: 671 GATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHRGG 730
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
IK V++PE N +DL E+P V+A LEI KR+E+VL A + P+
Sbjct: 731 IKTVLIPEENKRDLEEIPQNVIADLEIHPVKRIEEVLTIALQ-NSPY 776
>gi|456738232|gb|EMF62909.1| ATP-dependent protease La Type I [Stenotrophomonas maltophilia
EPM1]
Length = 815
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 341/774 (44%), Positives = 472/774 (60%), Gaps = 66/774 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V++EGL R V T+ R SL +E+E
Sbjct: 72 GTLAQVLQL---LKLPDG--TIKVLVEGLSRVQV-------THVDERNGSLHGQAVEIEA 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFVASF 163
++ +R+ +A A L+S+ EQ KT + LL+T+ +LAD A
Sbjct: 120 TDERE-----AREVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPARLADTIAAHI 174
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ ++ +L+++ + RL LVD + ++ ++I +V+ Q+ KSQ+E+ L +Q
Sbjct: 175 SVRLADKQRLLETLAVGDRLEMLVGLVDGEIDVQQMEKRIRGRVKSQMEKSQREYYLNEQ 234
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P R
Sbjct: 235 MKAIQKELGDLDDAPGELEELARKIAEAGMPKAVEAKARNELNKLKQMSPMSAEAAVVRN 294
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YLE + +PW+K S+ + DLKAA++ LD+DHYGL +VK+RI+EYLAV+ +GP+L
Sbjct: 295 YLEWLLGVPWKKRSK-VRKDLKAAQDTLDADHYGLEKVKERILEYLAVQSRVKQMKGPIL 353
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++ L +
Sbjct: 354 CLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQNLNK 413
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V+FVAT+
Sbjct: 414 VGSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEVMFVATS 473
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E L+I ++ +
Sbjct: 474 NSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIKANGLQPEELEIGSDAIQDI 532
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
++ YTRE+GVRNLER +A + R ++A L P
Sbjct: 533 VRYYTRESGVRNLEREIAKICRKVVKEIA----------------LAGPQ---------- 566
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
P+ + V L+K LG RFD A E G+ GL
Sbjct: 567 ------PVKAKKGAKKKAL-----VSVSSKNLDKYLGVRRFDFGRAEEENEI-GLVTGLA 614
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ +E+T + GKG+L LTGQLG+V+KESA AL+ VR+RA + + +
Sbjct: 615 WTEVGGDLLQIESTLVPGKGQLILTGQLGNVMKESASAALSVVRSRAVGFGIDS----DF 670
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
LQ D+H+H P GA PKDGPSAGV +VT+LVS+ ++ VRAD AMTGE+TLRG V +GG
Sbjct: 671 LQKHDVHLHVPDGATPKDGPSAGVAMVTSLVSMLTKVPVRADVAMTGEITLRGRVTAIGG 730
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAA R GI+ VI+PE N KDL ++PA V L+I+ K +E+VL+ A E
Sbjct: 731 LKEKLLAALRGGIRTVIIPEENRKDLADIPANVTRDLKIVPVKYIEEVLDLALE 784
>gi|317052578|ref|YP_004113694.1| ATP-dependent protease La [Desulfurispirillum indicum S5]
gi|316947662|gb|ADU67138.1| ATP-dependent protease La [Desulfurispirillum indicum S5]
Length = 827
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 316/762 (41%), Positives = 462/762 (60%), Gaps = 81/762 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P GRV V+++GL + +++ R Y+ + + ++ V + AL R K
Sbjct: 121 PDGRVK--VLVQGLRKGVIEQFFAREGYHEVEVRQFDDLQVNTSGVRTE----ALIRNVK 174
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPI-------HKLADIFVASFEISFEEQLVMLDS 176
+++ GR +L + + + KLADI A+ + E+ +L
Sbjct: 175 EHLGQMVQY--------GRM-ILPDVLALIDSMDDPGKLADIVAANMSLKVEDAQEVLAE 225
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
RL + +L+ + L+ + + KI + +G++ K Q+E+ LR+Q++AI++ELGD DD
Sbjct: 226 PHPVKRLRRVYDLLSKELKLLDMQMKIQTEAKGEMDKLQREYYLREQLKAIQKELGDTDD 285
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+++ LE K+ AGMP ++ K K+L R ++M R YLE + ++PW+K
Sbjct: 286 VGEEVRELEEKISKAGMPKDVHKEAMKQLGRYRRMHQDASEANIIRTYLEWLIEIPWKKK 345
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
+++ +LDLK A + L+ DH+GL +K RI+EYL V+KLKPD +GP++CF GPPG GKTSL
Sbjct: 346 TKD-NLDLKKAMQILNEDHFGLQDIKDRIVEYLGVKKLKPDMKGPIICFAGPPGTGKTSL 404
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
SIA ALGRKF+RISLGGV+DEA+IRGHRRTY+G+MPG+++ G+K G NP+ +LDEI
Sbjct: 405 GKSIARALGRKFVRISLGGVRDEAEIRGHRRTYVGAMPGKIVQGMKTAGTVNPLFMLDEI 464
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK G D +GDP+SA+LEVLDPEQN +F DHY+ +P+DLS V+F+ TAN IP L DR
Sbjct: 465 DKLGYDYKGDPSSAMLEVLDPEQNNSFQDHYIGLPYDLSGVMFICTANNVHSIPAALRDR 524
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
ME+IEL YT EEKL+IA ++LIPR ++ +G+ E++ + + ++ V+++YTREAG+RNL
Sbjct: 525 MEIIELSSYTEEEKLQIARKYLIPRQMEANGISEEYINLSQEALEQVVRQYTREAGLRNL 584
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER L L R A KVA+ + +HR+
Sbjct: 585 ERELGKLCRKVAKKVAD--------GHRKIHRIS-------------------------- 610
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRF--DDREAAERVAAPGISVGLVWTNFGGEVQFV 654
V+N L LG P+F D+ + + G+ GL WT GGE+ V
Sbjct: 611 -VTN--------------LHHYLGTPKFLPDEENKEDNI---GVVNGLAWTQVGGEILLV 652
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFP 714
E +M GKG L LTGQLGDV+KESA ALT+ + A +L+L ++ RD H+H P
Sbjct: 653 EVASMSGKGNLMLTGQLGDVMKESAHAALTYAKHLALELKLKT----DIFSKRDYHVHVP 708
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
AGA+PKDGPSAG+T+ TA+VS R VR D AMTGE+T+RG VLP+GG+K+K LAA R
Sbjct: 709 AGAIPKDGPSAGITIATAIVSDICRIPVRHDVAMTGEITIRGNVLPIGGLKEKALAAARG 768
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
I+ +I+P+ N KDL ++P + +L I + K + +VLE A
Sbjct: 769 DIRTIIIPKGNEKDLRDIPKKIRDTLTIHVVKHVREVLEIAL 810
>gi|307129929|ref|YP_003881945.1| DNA-binding ATP-dependent protease La [Dickeya dadantii 3937]
gi|306527458|gb|ADM97388.1| DNA-binding ATP-dependent protease La [Dickeya dadantii 3937]
Length = 787
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 334/769 (43%), Positives = 467/769 (60%), Gaps = 86/769 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPAIEEREQEVLMRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVTERLEYLMAMMESEIDLLQVEKRIRSRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK++SA MP + + EL++L+ M P T R Y++ + +PW+
Sbjct: 246 DAPDEQEALKRKIESASMPKEAREKAEAELQKLRMMSPMSAEATVVRSYIDWMVQVPWQ- 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LDSDHYGL RVK+RI+EYLAV+ RGP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLVKAQEMLDSDHYGLERVKERILEYLAVQSRVSKIRGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIARQHLLPKQIERNALKKGELTVEDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + S ++D L
Sbjct: 544 LEREISKLCRKA---------------------VKSLMMDKAL----------------- 565
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAE--RVAAPGISVGLVWTNFGGEVQF 653
+IT L++ LG R+D A E RV G GL WT GG++
Sbjct: 566 ----KHIQITGD------NLKEYLGVQRYDYGRADEENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E ++ GKG+L TG LG+V++ES Q ALT VRARA L + + + + RDIH+H
Sbjct: 613 IETASVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINS----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
GIK V++PE N +DL E+P V+A LEI KR+E+VL A + P+
Sbjct: 729 GGIKTVLIPEENKRDLEEIPQNVIADLEIHPVKRIEEVLTIALQ-NSPY 776
>gi|138896216|ref|YP_001126669.1| class III heat-shock ATP-dependent Lon protease [Geobacillus
thermodenitrificans NG80-2]
gi|134267729|gb|ABO67924.1| Class III heat-shock ATP-dependent Lon protease [Geobacillus
thermodenitrificans NG80-2]
Length = 780
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 320/783 (40%), Positives = 480/783 (61%), Gaps = 88/783 (11%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI--------S 97
+ G AR L ++ P+G T+ V++EG+ R + E+ + Y++ ++
Sbjct: 73 YKMGTIARVKQL---LKLPNG--TFRVLVEGIARALITEVVSEEPYFSVKVEKFADRASK 127
Query: 98 SLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
LE ++ +E +I LS++ A I +++ GR +AD
Sbjct: 128 DLEDEALKRTMLEYFEQYINLSKRLSADIYASIVDIDEP----GR------------MAD 171
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
I + + EE+ +L+++D+K RL+K +++ + +++ +KI+ +V+ + ++QKE
Sbjct: 172 IIASHLPLKLEEKQRILETIDVKERLNKIIQILHNEKEVLQLEKKISARVKQSMERTQKE 231
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ LR+QM+AI++ELG+ + ++ AL+ K+++AGMP ++ + KEL R +K+
Sbjct: 232 YYLREQMKAIQKELGEKEGKTGEVEALKEKIEAAGMPEHVKETALKELDRYEKIPATSAE 291
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + LPW K +++I D+K A+ L+ +HYGL +VK+R++E+L+V++L
Sbjct: 292 SAVIRNYLDWLIALPWSKETKDIH-DIKRAETILNEEHYGLDKVKERVLEFLSVQQLTQS 350
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC GPPGVGKTSLA SIA ALGR+F+R+SLGGV+DE++IRGHRRTY+G+MPGR+
Sbjct: 351 LKGPILCLAGPPGVGKTSLARSIAKALGRRFVRMSLGGVRDESEIRGHRRTYVGAMPGRI 410
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
I G+K+ G NPV LLDEIDK SD RGDP++A+LEVLDPEQN TF+DHY+ P+DLSKV
Sbjct: 411 IQGMKKAGTINPVFLLDEIDKMSSDFRGDPSAAMLEVLDPEQNHTFSDHYIEEPYDLSKV 470
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+F+ATAN IP PLLDRME+I +PGYT EKL IA RHL+P+ L +HGL LQ+ +
Sbjct: 471 MFIATANNLATIPQPLLDRMEIIHIPGYTEVEKLHIAKRHLLPKQLAEHGLKKAALQVRD 530
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+ +I+ YTREAGVR LER LAA+ R AA + E+++
Sbjct: 531 DAMLDIIRHYTREAGVRELERQLAAICRKAARLIVSGEKKR------------------- 571
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLG--PPRFDDREAAERVAA 635
+VV + +E+ LG R+ EA +++
Sbjct: 572 ------------------------------VVVTQNNIEEFLGKRKYRYGQAEAEDQI-- 599
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
G++ GL +T FGG+ +E + +G G+L LTG+LGDV+KESAQ A ++VR+RA +L +
Sbjct: 600 -GVATGLAYTAFGGDTLAIEVSLAKGNGKLVLTGKLGDVMKESAQAAFSYVRSRAEELGI 658
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
+ DIHIH P GAVPKDGPSAG+T+ TAL+S + K V MTGE+TLR
Sbjct: 659 ----DPKFHETYDIHIHVPEGAVPKDGPSAGITIATALISALTGKPVSRFVGMTGEITLR 714
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
G VLP+GG+K+K L+AHR G+K VILP+ N KDL ++P V L +L +++VL A
Sbjct: 715 GRVLPIGGLKEKTLSAHRAGLKTVILPKDNEKDLADIPDTVKRDLRFVLVSHLDEVLPHA 774
Query: 816 FEG 818
G
Sbjct: 775 LVG 777
>gi|116626097|ref|YP_828253.1| ATP-dependent protease La [Candidatus Solibacter usitatus
Ellin6076]
gi|116229259|gb|ABJ87968.1| ATP-dependent protease La [Candidatus Solibacter usitatus
Ellin6076]
Length = 790
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 312/669 (46%), Positives = 437/669 (65%), Gaps = 59/669 (8%)
Query: 154 KLADIFVASF-EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
+LAD + + E+ +L+ +D VRL++ + R L+ + + +I +V+GQLS
Sbjct: 172 RLADYVAGTLPALGHIERQKLLEELDGMVRLNEIHRHLTRELELVELRSRIQDQVQGQLS 231
Query: 213 KSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQ 272
++Q+EF LR+Q++AI++ELG+ DD D+ L +K++SAGM ++ +EL RL +M
Sbjct: 232 QNQREFYLREQLKAIQKELGEGDDASRDVEELRKKLESAGMKEDVKIEALRELNRLARMS 291
Query: 273 PQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVR 332
P P Y +R YLE +A+LPW +S +++K A E LD DHY L +VK RI++YLAV
Sbjct: 292 PASPEYGMTRTYLEWMANLPWSVSSGS-QVNVKRAAEILDEDHYDLEKVKDRILDYLAVL 350
Query: 333 KLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGS 392
+LKP +GP+LCFVG PGVGKTSL SIA +LGRKF RIS+GG+ DEA+IRGHRRTYIG+
Sbjct: 351 QLKPVLKGPILCFVGAPGVGKTSLGRSIARSLGRKFARISMGGMHDEAEIRGHRRTYIGA 410
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
+PG+++ L+R G +PV +LDE+DK G D RGDPASALLEVLDPEQN TF D+YL+VPF
Sbjct: 411 LPGQIVQALRRAGSNDPVFMLDEVDKLGRDFRGDPASALLEVLDPEQNSTFRDNYLDVPF 470
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGL-GSE 511
DLSKV+F+ TAN PIP L DRME+I L GYT +EK+ IA R+LIPR ++GL G++
Sbjct: 471 DLSKVLFITTANVLDPIPDALRDRMEIITLEGYTEQEKVIIAFRYLIPRQTAENGLDGTQ 530
Query: 512 FLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGS 571
++ + V+ +++RYTREAGVRNLER + + R A
Sbjct: 531 DIEFGDDAVRHIVRRYTREAGVRNLERLIGTICRKQA----------------------- 567
Query: 572 PLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRF-DDREAA 630
R+A+G +M V P ++EK LG PR+ D E A
Sbjct: 568 ----RRIAEGTREKMTVTP----------------------ELVEKDLGAPRYRTDTEVA 601
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGE-LHLTGQLGDVIKESAQIALTWVRAR 689
+R + PG++VGL WT GG+V F+EA M G + L +TGQLG V++ES Q ALTWVR
Sbjct: 602 DRTSRPGVAVGLAWTPVGGDVLFIEAGRMPGGNKGLIMTGQLGPVMQESVQAALTWVRGN 661
Query: 690 ATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMT 749
AT + +L + DIHIH PAGA+PKDGPSAG+T+ TAL+S+ + +RVR + AMT
Sbjct: 662 ATKYGI----DPDLFKTSDIHIHVPAGAIPKDGPSAGITMATALLSMLTERRVRTNLAMT 717
Query: 750 GEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE-VPAAVLASLEIILAKRM 808
GE+TL G VLP+GG+K+K+LAA R G++ VILP N +++E + + + +++ K M
Sbjct: 718 GEITLTGQVLPIGGIKEKVLAAKRSGVREVILPFENEVNVIEDLKSEQIDDIQLHYVKAM 777
Query: 809 EDVLEQAFE 817
E+V+E A E
Sbjct: 778 EEVVELALE 786
>gi|354583583|ref|ZP_09002481.1| ATP-dependent protease La [Paenibacillus lactis 154]
gi|353197463|gb|EHB62944.1| ATP-dependent protease La [Paenibacillus lactis 154]
Length = 778
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 317/753 (42%), Positives = 460/753 (61%), Gaps = 65/753 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EG+ R + + + + YY L E+ DP+ AL R
Sbjct: 84 PNG--TIRVLVEGMERAEIIQYTDQADYYEVIARELP------EEENNDPEVSALMRTVL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I++ K+ T + + +LAD+ + + +++ +L+++D++ RL
Sbjct: 136 SQFENYINL--SKKVTPETLAAVSDIDEPGRLADVITSHLSLKIKDKQEILETIDVRKRL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K ++++ + + + KI Q+V+ Q+ K+QKE+ LR+QM+AI++ELGD + ++
Sbjct: 194 EKLLDILNNEREVLELERKINQRVKKQMEKTQKEYYLREQMKAIQKELGDKEGRAGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L ++Q +P + + V+KE+ RL+KM R Y++ + LPW +E+ DLD
Sbjct: 254 LRSQLQELQLPERVHEKVEKEIDRLEKMPASSAEGGVIRNYVDWLLALPWTNKTED-DLD 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
+ A++ LD DHYGL + K+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA +
Sbjct: 313 IAKAEQVLDEDHYGLEKPKERVLEYLAVQKLVKKMKGPILCLVGPPGVGKTSLARSIARS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L RKF+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV LLDEIDK SD
Sbjct: 373 LERKFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGSLNPVFLLDEIDKMASDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP+SALLEVLDPEQN TF+DH++ +PFDLS+V+FV TAN IP PLLDRMEV+ +P
Sbjct: 433 RGDPSSALLEVLDPEQNNTFSDHFIEIPFDLSQVMFVTTANALHNIPRPLLDRMEVLYIP 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EKL+IA R+L+P+ +HGL E LQ+ E + VI+ YTRE+GVRNLE+ +AAL
Sbjct: 493 GYTEIEKLQIANRYLLPKQKSEHGLEPEQLQVDEGALLKVIREYTRESGVRNLEQQVAAL 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA ++ E + + + D+
Sbjct: 553 CRKAAKRIVTNESDSIVIGADDI------------------------------------- 575
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+ LG P+F AE G GL WT GGE +E T + G G
Sbjct: 576 ------------KDYLGIPKF-RYGMAELEDQVGTVTGLAWTEVGGETLTIEVTVVPGTG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A ++ R++A +L + + + D+HIH P GA+PKDGP
Sbjct: 623 KLTLTGKLGDVMKESAQAAFSFTRSKAAELGI----DPDFHEKLDVHIHIPEGAIPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S +++ V D AMTGE+TLRG VLP+GG+K+K LAAHR G K+++LP+
Sbjct: 679 SAGITIATALISSLTKRHVARDVAMTGEITLRGRVLPIGGLKEKSLAAHRAGYKKILLPK 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N +DL ++P +V +E + M+ VLE A
Sbjct: 739 DNERDLRDIPDSVKNDVEFVPVSHMDQVLEHAL 771
>gi|397905708|ref|ZP_10506550.1| ATP-dependent protease La Type I [Caloramator australicus RC3]
gi|397161227|emb|CCJ33885.1| ATP-dependent protease La Type I [Caloramator australicus RC3]
Length = 776
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 317/753 (42%), Positives = 466/753 (61%), Gaps = 72/753 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EGL R ++EL+ + ++ A+I + E VE+ + AL RQ E ++
Sbjct: 88 VLVEGLHRAEIEELTQKEPFFAAKIKIFKE-----EFVEKTAEVEALMRQAIKAFEEYVN 142
Query: 132 VLEQKQKTGGRTKVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATE 188
Q ++L I KLADI + I +++ +L+++D RL K E
Sbjct: 143 -----QNNTIPDEILGTVEDIDEPGKLADIITSYLAIKQDKRQELLEAIDPVERLRKLLE 197
Query: 189 LVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKM 248
++ R + +++ ++I KV+ ++ K QKE+ LR+Q++ I+EELGD D ++++ ++K+
Sbjct: 198 ILAREIDILKIEKRIGMKVKRKIDKMQKEYYLREQLKVIQEELGDRDGIQEEIEEYKKKI 257
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAK 308
+ A +P + EL+RL+++ P P R YL+ I +LPW K +++ DL+ +
Sbjct: 258 EKAKLPKEAKEKAAYELKRLERIGPNSPESGVIRTYLDWIVELPWAKETKDTQ-DLEKVR 316
Query: 309 ERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF 368
E L+ +HYGL VK+RI+E+LAVRKL +GP+LC VGPPGVGKTS+A SIA+AL R F
Sbjct: 317 EVLEKEHYGLEEVKERILEFLAVRKLNKSMKGPILCLVGPPGVGKTSIARSIANALNRNF 376
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
+RISLGGV+DEA+IRGHRRTYIG++PGR+I G+K+ G NPV LLDEIDK SD RGDPA
Sbjct: 377 VRISLGGVRDEAEIRGHRRTYIGAIPGRIIYGMKQAGSKNPVFLLDEIDKLSSDFRGDPA 436
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
ALLEVLD EQN +F DHY+ + FDLSKV+F+ TAN IP PLLDRMEVIE+ GYT E
Sbjct: 437 DALLEVLDAEQNHSFRDHYIELSFDLSKVLFITTANTIDTIPRPLLDRMEVIEISGYTDE 496
Query: 489 EKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA 548
EK++I R+L+PR + ++GL E + I E ++K +I YTRE+GVRNLER + ++ R A
Sbjct: 497 EKVKICSRYLLPRQIKENGLKEENISISEGVIKDIINLYTRESGVRNLERKIGSICRKVA 556
Query: 549 VKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPL 608
++V ++ ++ +S+++ +
Sbjct: 557 IEVVKKPDKKVKITSQNLEKY--------------------------------------- 577
Query: 609 VVDEAMLEKVLGPPRF--DDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELH 666
LG P+F D+R+ +++ G+++GL WT +GG+ VE M GKG L
Sbjct: 578 ----------LGIPKFKQDERDRKDQI---GVAMGLAWTPYGGDTLPVEVMPMPGKGNLE 624
Query: 667 LTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAG 726
LTGQLGDV+KESA+ +++R A + + D+HIH P GAVPKDGPSAG
Sbjct: 625 LTGQLGDVMKESARAGFSFIRGNAEKFGI----DPKFYESTDLHIHVPEGAVPKDGPSAG 680
Query: 727 VTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNL 786
+T+VTA+VS S+K +R+D AMTGE+TL G VL +GGVK+K LAA+R GI+ +ILP N
Sbjct: 681 ITMVTAMVSALSKKPLRSDIAMTGEITLTGRVLAIGGVKEKSLAAYRAGIRNIILPLENK 740
Query: 787 KDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
+D+ +VP + + I +R+E+VLE A G
Sbjct: 741 RDIEKVPENIRKKINFIFVERIEEVLENALVKG 773
>gi|148655610|ref|YP_001275815.1| ATP-dependent protease La [Roseiflexus sp. RS-1]
gi|148567720|gb|ABQ89865.1| ATP-dependent protease La [Roseiflexus sp. RS-1]
Length = 823
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 344/779 (44%), Positives = 460/779 (59%), Gaps = 83/779 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTY----YTARISSLEM 101
H GV AR + R SG +V+ GL R + + + Y Y R +E
Sbjct: 74 HRVGVVARIEQIGRLPNGGSG-----MVVRGLVRAELIDQTQEEPYPRFRYVERHDHVEH 128
Query: 102 TKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETV--PIHKLADIF 159
T+ E+EQ+ + +VLE + + + ++ P H LAD
Sbjct: 129 TE-ELEQL------------MTEVHAAIDAVLELRPGIPQEIRNFVRSINDPGH-LADNT 174
Query: 160 VASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFL 219
S + +FEE+ +L++ D+ RL K + L + V +I Q+V+ ++ Q+EF
Sbjct: 175 GYSPDYTFEERQDLLETFDVVERLRKVLAFYRKQLALMDVQARIRQEVQDAAARQQREFY 234
Query: 220 LRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYT 279
LRQQ+RAI++ELG+++ + D+L L K+ SA + K +EL RL +M P Y
Sbjct: 235 LRQQLRAIQKELGEDNPEADELAELREKLASANLSPAARKEADRELNRLSRMNSASPEYQ 294
Query: 280 SSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK---- 335
R YLE +A+LPW + +D+ ++ LD DHYGL ++K+RI+EYLAVR+ +
Sbjct: 295 MVRTYLEWMAELPWNTFTG-APIDIAHTRQVLDEDHYGLQKIKERILEYLAVRQRRQALN 353
Query: 336 ---PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGS 392
AR P+L FVGPPGVGKTSL SIA ALGR+F R+SLGGV+DEA++RG RRTYIGS
Sbjct: 354 DGHERAREPILAFVGPPGVGKTSLGQSIARALGRQFARMSLGGVRDEAELRGFRRTYIGS 413
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
PGRLI L+R G +PV+LLDEIDK G D RGDPA+ALLEVLDPEQN TF DHYLNVPF
Sbjct: 414 QPGRLIQELRRAGTSDPVILLDEIDKLGHDYRGDPAAALLEVLDPEQNDTFTDHYLNVPF 473
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLSKV+F+ATAN +PP L DRMEVIEL GYT +EK+ IA RHLIP+ L +GL +
Sbjct: 474 DLSKVLFIATANTMDTVPPALRDRMEVIELSGYTVDEKVHIAQRHLIPKQLRANGLRPDE 533
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSP 572
+ E ++++I YTREAGVRNLER + A+ R ++ E E A PS
Sbjct: 534 VIFEEEALRVIIHDYTREAGVRNLERQIGAVLRKVTRRLV--EDEPAPPS---------- 581
Query: 573 LLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAER 632
+P+V+ + LG PRF + EA ER
Sbjct: 582 ---------------------------------TPVVITVEFVRSALGRPRFFN-EARER 607
Query: 633 VAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATD 692
+ PG++ GLVWT GG++ FVEA+ + G EL LTGQLGDV++ESA+ ALT VRARA
Sbjct: 608 IDQPGVATGLVWTPAGGDIVFVEASVVEGNRELRLTGQLGDVMRESAEAALTCVRARAHT 667
Query: 693 LQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEM 752
L + +HIH P GAVPKDGPSAG+T+ TAL S + + VR D AMTGE+
Sbjct: 668 LGI----DPRFFDTHAVHIHVPGGAVPKDGPSAGITMATALASAATGRLVRDDVAMTGEI 723
Query: 753 TLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
TLRG VLPVGGVK+K+L AHR GI +ILP RN DL ++P V +L +L +++V
Sbjct: 724 TLRGRVLPVGGVKEKVLGAHRAGIGAIILPRRNDIDLDDLPRDVREALTFVLVDTLDEV 782
>gi|42525197|ref|NP_970577.1| ATP-dependent protease La [Bdellovibrio bacteriovorus HD100]
gi|81829100|sp|Q6MGP8.1|LON2_BDEBA RecName: Full=Lon protease 2; AltName: Full=ATP-dependent protease
La 2
gi|39577408|emb|CAE81231.1| ATP-dependent protease La [Bdellovibrio bacteriovorus HD100]
Length = 801
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 320/754 (42%), Positives = 459/754 (60%), Gaps = 67/754 (8%)
Query: 66 GRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKAT 125
GRV ++++G+ + V+ + + + +E T ++ VE + AL R K
Sbjct: 89 GRVK--ILIQGVAKGRVKNFTKTSPSFEVAVEKIEETPVQKTVVENE----ALIRTAKEH 142
Query: 126 AMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSK 185
+I++ + + VL + ++AD+ ++ I ++ +L++ D RL
Sbjct: 143 IERIIAL--GRPLSPDILLVLDDVSDPGRIADLIASNLGIKVQDAQKVLETSDATERLKL 200
Query: 186 ATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALE 245
E++ L+ ++ K + +SKSQ+E+ LR+QM+AIK ELG+ D +++ L
Sbjct: 201 VNEILAAELEVMQTQSKNRTGAKDDMSKSQREYFLREQMKAIKNELGEGDSKSEEMDELR 260
Query: 246 RKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLK 305
K+ +AGMP+++ K+L RL++M P T R YL+ +ADLPW K SE+ +DLK
Sbjct: 261 EKLVNAGMPTHVEAEALKQLGRLERMHPDASEATMVRTYLDWMADLPWSKKSED-HIDLK 319
Query: 306 AAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALG 365
+KE LD DHY L + K RI+E+LAVRKLKP+ +GP+LCF GPPGVGKTSL SIA A+G
Sbjct: 320 RSKEILDEDHYELEKAKDRIMEFLAVRKLKPNLKGPILCFGGPPGVGKTSLGKSIARAMG 379
Query: 366 RKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRG 425
R++ RI+LGGVKDEA+IRGHRRTY+G+MPG++I L++ NPV++LDEIDK GSD RG
Sbjct: 380 REYFRIALGGVKDEAEIRGHRRTYVGAMPGKIIQALRQAKTSNPVIVLDEIDKLGSDFRG 439
Query: 426 DPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGY 485
DP++A+LEVLDPEQN TF D+YLNV FDLS V+F+ATAN + IPP L DRME++ +PGY
Sbjct: 440 DPSAAMLEVLDPEQNATFRDNYLNVDFDLSNVLFIATANVLENIPPALRDRMEILNIPGY 499
Query: 486 TPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALAR 545
T +KL I +HLI R ++ +G+ E ++ + +K +I YTREAG+RNLER + ++ R
Sbjct: 500 TENDKLLITKKHLIKRQIEANGITEENIKFTDEGIKYLIAGYTREAGLRNLEREVGSVCR 559
Query: 546 AAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
A V +E + EV +P
Sbjct: 560 KVAKMVVMEE-----------------------TNFVEVNATTVP--------------- 581
Query: 606 SPLVVDEAMLEKVLGPPRF--DDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
++LGPPRF DD+ A +V G+ GL WT GGEV +EA M+GKG
Sbjct: 582 -----------ELLGPPRFQRDDKIADSQV---GVVQGLAWTQAGGEVLTIEALKMKGKG 627
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
L LTGQLGDV+KESA A+++ RA +L + ED + D+H+H PAGA+PKDGP
Sbjct: 628 HLALTGQLGDVMKESAHAAMSYARAHQEELG-IPED---FFEKYDVHVHLPAGAIPKDGP 683
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+TL TALVSL + VR D AMTGE+TL+G VLPVGG+++K LAA GI +I+P
Sbjct: 684 SAGITLTTALVSLMTGTPVRHDIAMTGEVTLQGRVLPVGGIREKCLAALNLGITNIIIPM 743
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
KDL ++P + ILA+ +++V AF+
Sbjct: 744 ACQKDLADIPKVFKDKINFILAENLDEVFAVAFD 777
>gi|312110029|ref|YP_003988345.1| ATP-dependent protease La [Geobacillus sp. Y4.1MC1]
gi|336234453|ref|YP_004587069.1| anti-sigma H sporulation factor LonB [Geobacillus
thermoglucosidasius C56-YS93]
gi|311215130|gb|ADP73734.1| ATP-dependent protease La [Geobacillus sp. Y4.1MC1]
gi|335361308|gb|AEH46988.1| anti-sigma H sporulation factor, LonB [Geobacillus
thermoglucosidasius C56-YS93]
Length = 773
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 318/781 (40%), Positives = 478/781 (61%), Gaps = 84/781 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR--------IS 97
+ G AR L ++ P+G T+ V++EG+ R + E+ + Y+ +
Sbjct: 66 YKMGTLARVKQL---LKLPNG--TFRVLVEGIARAIITEIVSEEPYFMVKAEKFVDRTTK 120
Query: 98 SLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
LE ++ +E +I LS++ A I+ +++ GR +AD
Sbjct: 121 DLEDEALKRTMLEYFEQYINLSKRLSADIYASIADIDEP----GR------------MAD 164
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
I + + EE+ +L+++D+K R+ K +++ + +++ +KI+ +V+ + ++QKE
Sbjct: 165 IIASHLPLKLEEKQRILETIDVKERVHKIIQILHNEKEVLQLEKKISMRVKQSMERTQKE 224
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ LR+QM+AI++ELG+ + ++ L+ K+++AGMPS++ + KEL R +K+
Sbjct: 225 YYLREQMKAIQKELGEKEGKAGEVETLKEKIEAAGMPSHVKETALKELDRYEKIPATSAE 284
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + LPW +E+I D+K A+ L+ DHYGL +VK+R++E+L+V++L
Sbjct: 285 SAVIRNYLDWLIALPWSTQTEDIH-DIKRAEAILNEDHYGLEKVKERVLEFLSVQQLTKS 343
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC GPPGVGKTSLA SIA +L R+F+RISLGGV+DE++IRGHRRTY+G+MPGR+
Sbjct: 344 LKGPILCLAGPPGVGKTSLARSIAKSLNRRFVRISLGGVRDESEIRGHRRTYVGAMPGRI 403
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
I G+K+ G NPV LLDEIDK SD RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV
Sbjct: 404 IQGMKKAGTINPVFLLDEIDKMSSDFRGDPSAALLEVLDPEQNHAFSDHYIEEPYDLSKV 463
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+F+ATAN IP PLLDRME+I +PGYT EKL+IA RHL+P+ + +HGL LQI +
Sbjct: 464 MFIATANNLATIPQPLLDRMEIITIPGYTEVEKLQIAKRHLLPKQIKEHGLQKSALQIRD 523
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+ +I+ YTREAGVR LER LAA+ R AA + E+++ + + K++
Sbjct: 524 DAMMSIIRYYTREAGVRELERQLAAICRKAARFIVSGEKKRVIITEKNMEEF-------- 575
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
+G+ + R+ E ++V G
Sbjct: 576 -------------LGKKKY--------------------------RYGQAELEDQV---G 593
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
++ GL +T FGG+ +E + GKG+L LTG+LGDV+KESAQ A ++VRARA L +
Sbjct: 594 VATGLAYTAFGGDTLSIEVSLAPGKGKLVLTGKLGDVMKESAQAAFSYVRARAEQLGVDP 653
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
E + DIHIH P GAVPKDGPSAG+T+ TAL+S + + V MTGE+TLRG
Sbjct: 654 E----FHEKYDIHIHVPEGAVPKDGPSAGITIATALISALTGRPVSRFVGMTGEITLRGR 709
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VLP+GG+K+K L+AHR G+K+VILP+ N KDL ++P V L+ +L +++VL+ A
Sbjct: 710 VLPIGGLKEKTLSAHRAGLKKVILPKDNEKDLDDIPDVVKKDLQFVLVSHLDEVLQHALA 769
Query: 818 G 818
G
Sbjct: 770 G 770
>gi|424667286|ref|ZP_18104311.1| lon protease [Stenotrophomonas maltophilia Ab55555]
gi|401069421|gb|EJP77943.1| lon protease [Stenotrophomonas maltophilia Ab55555]
Length = 815
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 341/774 (44%), Positives = 471/774 (60%), Gaps = 66/774 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V++EGL R V T+ R SL +E+E
Sbjct: 72 GTLAQVLQL---LKLPDG--TIKVLVEGLSRVQV-------THVDERNGSLHGQAVEIEA 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFVASF 163
++ +R+ +A A L+S+ EQ KT + LL+T+ +LAD A
Sbjct: 120 TDERE-----AREVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPARLADTIAAHI 174
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ ++ +L+++ + RL LVD + ++ ++I +V+ Q+ KSQ+E+ L +Q
Sbjct: 175 SVRLADKQRLLETLAVGDRLEMLVGLVDGEIDVQQMEKRIRGRVKSQMEKSQREYYLNEQ 234
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P R
Sbjct: 235 MKAIQKELGDLDDAPGELEELARKIAEAGMPKAVEAKARNELNKLKQMSPMSAEAAVVRN 294
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YLE + +PW+K S+ + DLKAA++ LD+DHYGL +VK+RI+EYLAV+ +GP+L
Sbjct: 295 YLEWLLGVPWKKRSK-VRKDLKAAQDTLDADHYGLEKVKERILEYLAVQSRVKQMKGPIL 353
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++ L +
Sbjct: 354 CLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQNLNK 413
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V+FVAT+
Sbjct: 414 VGSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEVMFVATS 473
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E L+I ++ +
Sbjct: 474 NSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQVKANGLQPEELEIGSDAIQDI 532
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
++ YTRE+GVRNLER +A + R ++A L P
Sbjct: 533 VRYYTRESGVRNLEREIAKICRKVVKEIA----------------LAGPQ---------- 566
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
P+ + V L+K LG RFD A E G+ GL
Sbjct: 567 ------PVKAKKGAKKKAL-----VSVSSKNLDKYLGVRRFDFGRAEEENEI-GLVTGLA 614
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ +E+T + GKG+L LTGQLG+V+KESA AL+ VR+RA + + +
Sbjct: 615 WTEVGGDLLQIESTLVPGKGQLILTGQLGNVMKESASAALSVVRSRAVGFGIDS----DF 670
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
LQ D+H+H P GA PKDGPSAG +VT+LVS+ +R VRAD AMTGE+TLRG V +GG
Sbjct: 671 LQKHDVHLHVPDGATPKDGPSAGAAMVTSLVSMLTRVPVRADVAMTGEITLRGRVTAIGG 730
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAA R GI+ VI+PE N KDL ++PA V L+I+ K +E+VL+ A E
Sbjct: 731 LKEKLLAALRGGIRTVIIPEENRKDLADIPANVTRDLKIVPVKYIEEVLDLALE 784
>gi|373455367|ref|ZP_09547203.1| ATP-dependent protease La [Dialister succinatiphilus YIT 11850]
gi|371935007|gb|EHO62780.1| ATP-dependent protease La [Dialister succinatiphilus YIT 11850]
Length = 774
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 307/661 (46%), Positives = 424/661 (64%), Gaps = 55/661 (8%)
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
AD A ++ ++ +L+ ++ RL L+D+ +Q R+ +I V ++ K Q
Sbjct: 167 ADFLSAQLLLTPRQRQDVLEETNVMDRLRLVHHLLDQEIQIGRLEAEINGDVRAKMDKEQ 226
Query: 216 KEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQ 275
+++ LRQ++++I + LGD E + +K++ +G+P + K + L M P
Sbjct: 227 QDYYLRQKIKSIHDRLGDTVSQEQEAEDYRKKLKESGIPQEFKAKIGKVIDHLAAMPPMM 286
Query: 276 PGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK 335
+R YL+ I LPW K S++ LDLK AK+ LD DHYGL ++K+RI+EYLAVR L
Sbjct: 287 AETAVARNYLDWIFSLPWNKESQD-KLDLKEAKKLLDHDHYGLTKIKERILEYLAVRVLA 345
Query: 336 PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPG 395
PDA+ P++CFVGPPGVGKTSLA SIA+A+GRKF RISLGG+ DEA+IRGHRRTYIG+MPG
Sbjct: 346 PDAKAPIICFVGPPGVGKTSLAQSIANAMGRKFARISLGGIHDEAEIRGHRRTYIGAMPG 405
Query: 396 RLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 455
R I+ + + NP++LLDEIDK G+D RGDPASALLE LDPEQNK F+D+Y+++PFDLS
Sbjct: 406 RFIEAIAQAKTKNPLILLDEIDKVGADFRGDPASALLEALDPEQNKAFHDNYIDIPFDLS 465
Query: 456 KVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI 515
KV F+ATAN IPP LLDRME+IEL GYT EEK++IA ++LIPR + ++GL ++ ++
Sbjct: 466 KVFFLATANTVSTIPPALLDRMELIELTGYTEEEKVKIAKQYLIPRQMKRNGLKAKDIRF 525
Query: 516 PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLD 575
+ +++ VI+ YTREAGVR LER + +L R K+ Q+ +LPS
Sbjct: 526 TDLLIRRVIEGYTREAGVRELERTIGSLCRKVGKKMV--LQDDSLPS------------- 570
Query: 576 NRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAA 635
++ LEK LGP +F A E A
Sbjct: 571 ----------------------------------LNAKTLEKYLGPVKFMPM-AEEHPDA 595
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
G GL WT GGEV EA ++GKG L LTGQLGDV+KESA+ A T++R+RA L L
Sbjct: 596 VGRVNGLAWTMAGGEVLDTEAVTIKGKGNLILTGQLGDVMKESAETAYTYIRSRAKQLGL 655
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
+ + D HIH P GAVPKDGPSAGVT+ TA+ S ++ ++VR DTAMTGE+TL
Sbjct: 656 KD----DFYETLDTHIHLPEGAVPKDGPSAGVTMATAMASAYTGRKVRGDTAMTGEITLT 711
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
G VLP+GGVK+K+LAA+++GIK+++LPE+N +DL E+PA+V L + K ++DVL A
Sbjct: 712 GEVLPIGGVKEKVLAANQFGIKQILLPEKNRRDLEELPASVRDKLHFVYVKNVDDVLNHA 771
Query: 816 F 816
Sbjct: 772 L 772
>gi|300114316|ref|YP_003760891.1| ATP-dependent protease la [Nitrosococcus watsonii C-113]
gi|299540253|gb|ADJ28570.1| ATP-dependent protease La [Nitrosococcus watsonii C-113]
Length = 773
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 317/749 (42%), Positives = 468/749 (62%), Gaps = 64/749 (8%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T ++++G+ R E+ + Y + +I++L E + + AL R A +
Sbjct: 82 TVQILVQGIERVEQLEMVQKQPYLSLKIATLS------EPSDTGAEIEALHRTVIELAGK 135
Query: 129 LISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATE 188
+I +++ + + G + P+H++ + + + F+++ +L + L
Sbjct: 136 MIELVQPQIQVGIHHIISDVEKPLHQIY-LLTSILSLDFDKEKELLAAATQAEALQLMHR 194
Query: 189 LVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKM 248
++ +Q + V KIT + ++ K Q+E++LRQQ+ AI+EELG+ + ++ ++ L ++M
Sbjct: 195 YLNHEVQVLEVRRKITSTAQTEIDKKQREYVLRQQLEAIQEELGETNPEQAEIKELRQRM 254
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAK 308
+ +P + K V+KE+ RL++M P Y +R Y+EL +LPW K +E+ LDLK A+
Sbjct: 255 EETELPELVRKEVEKEITRLERMPSAAPDYQLTRGYVELALELPWNKTTED-RLDLKRAR 313
Query: 309 ERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF 368
E LD DH+ L VK+RIIE+LAV KL P+A+ P+LCFVGPPGVGKTS+ S+A ALGRKF
Sbjct: 314 EILDEDHFDLEDVKERIIEHLAVMKLNPEAKSPILCFVGPPGVGKTSVGQSMARALGRKF 373
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
R+SLGG+ DE+++RGHRRTYIG+MPGR+I ++R G NP+++LDEIDK G D RGDPA
Sbjct: 374 ERMSLGGLHDESELRGHRRTYIGAMPGRIIRAIRRTGYQNPLLMLDEIDKLGRDFRGDPA 433
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
+ALLE+LDP QN F+D+YL++PFDLSK+ FV TAN IP PLLDRME++ LPGY+ E
Sbjct: 434 AALLEILDPAQNAEFHDNYLDLPFDLSKIFFVTTANTLDTIPRPLLDRMEILRLPGYSDE 493
Query: 489 EKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA 548
EK IA R+LI R + + GL L IP+ + +I+RYTREAGVR LER L +AR A
Sbjct: 494 EKQHIARRYLIGRQIREAGLSEIQLSIPDETLSYLIRRYTREAGVRELERMLGRIARKVA 553
Query: 549 VKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPL 608
+VA + + + +D
Sbjct: 554 TQVATGQTQPVTVTPQD------------------------------------------- 570
Query: 609 VVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAM-RGKGELHL 667
L ++LGP RF E +++ APG++ GL WT GG+V +VEA + GKG + L
Sbjct: 571 ------LVELLGPERFFAEEMRQQL-APGVAAGLAWTEAGGDVLYVEAALLPEGKG-MTL 622
Query: 668 TGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGV 727
TGQLG +++ESA+ A +++ + A +L++ ++Q +HIH PAGA+PKDGPSAGV
Sbjct: 623 TGQLGSIMQESAKAAQSYLWSHAEELKI----DQKIIQESGVHIHVPAGAIPKDGPSAGV 678
Query: 728 TLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLK 787
T+ TAL S ++ R+DTAMTGE+TL GLVLPVGG+K+K+LAAHR GI+R+ILP+ N K
Sbjct: 679 TMATALTSAYTHWPARSDTAMTGEITLSGLVLPVGGIKEKVLAAHRAGIQRIILPKENEK 738
Query: 788 DLVEVPAAVLASLEIILAKRMEDVLEQAF 816
DL E+P V S++ ILA R+E+VL +A
Sbjct: 739 DLREIPEHVQKSIQFILAGRIEEVLAEAI 767
>gi|196250172|ref|ZP_03148866.1| ATP-dependent protease La [Geobacillus sp. G11MC16]
gi|196210356|gb|EDY05121.1| ATP-dependent protease La [Geobacillus sp. G11MC16]
Length = 775
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 320/783 (40%), Positives = 480/783 (61%), Gaps = 88/783 (11%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI--------S 97
+ G AR L ++ P+G T+ V++EG+ R + E+ + Y++ ++
Sbjct: 68 YKMGTIARVKQL---LKLPNG--TFRVLVEGIARALITEVVSEEPYFSVKVEKFADRASK 122
Query: 98 SLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
LE ++ +E +I LS++ A I +++ GR +AD
Sbjct: 123 DLEDEALKRTMLEYFEQYINLSKRLSADIYASIVDIDEP----GR------------MAD 166
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
I + + EE+ +L+++D+K RL+K +++ + +++ +KI+ +V+ + ++QKE
Sbjct: 167 IIASHLPLKLEEKQRILETIDVKERLNKIIQILHNEKEVLQLEKKISARVKQSMERTQKE 226
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ LR+QM+AI++ELG+ + ++ AL+ K+++AGMP ++ + KEL R +K+
Sbjct: 227 YYLREQMKAIQKELGEKEGKTGEVEALKEKIEAAGMPEHVKETALKELDRYEKIPATSAE 286
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + LPW K +++I D+K A+ L+ +HYGL +VK+R++E+L+V++L
Sbjct: 287 SAVIRNYLDWLIALPWSKETKDIH-DIKRAETILNEEHYGLDKVKERVLEFLSVQQLTQS 345
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC GPPGVGKTSLA SIA ALGR+F+R+SLGGV+DE++IRGHRRTY+G+MPGR+
Sbjct: 346 LKGPILCLAGPPGVGKTSLARSIAKALGRRFVRMSLGGVRDESEIRGHRRTYVGAMPGRI 405
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
I G+K+ G NPV LLDEIDK SD RGDP++A+LEVLDPEQN TF+DHY+ P+DLSKV
Sbjct: 406 IQGMKKAGTINPVFLLDEIDKMSSDFRGDPSAAMLEVLDPEQNHTFSDHYIEEPYDLSKV 465
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+F+ATAN IP PLLDRME+I +PGYT EKL IA RHL+P+ L +HGL LQ+ +
Sbjct: 466 MFIATANNLATIPQPLLDRMEIIHIPGYTEVEKLHIAKRHLLPKQLAEHGLKKAALQVRD 525
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+ +I+ YTREAGVR LER LAA+ R AA + E+++
Sbjct: 526 DAMLDIIRHYTREAGVRELERQLAAICRKAARLIVSGEKKR------------------- 566
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLG--PPRFDDREAAERVAA 635
+VV + +E+ LG R+ EA +++
Sbjct: 567 ------------------------------VVVTQNNIEEFLGKRKYRYGQAEAEDQI-- 594
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
G++ GL +T FGG+ +E + +G G+L LTG+LGDV+KESAQ A ++VR+RA +L +
Sbjct: 595 -GVATGLAYTAFGGDTLAIEVSLAKGNGKLVLTGKLGDVMKESAQAAFSYVRSRAEELGI 653
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
+ DIHIH P GAVPKDGPSAG+T+ TAL+S + K V MTGE+TLR
Sbjct: 654 ----DPKFHETYDIHIHVPEGAVPKDGPSAGITIATALISALTGKPVSRFVGMTGEITLR 709
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
G VLP+GG+K+K L+AHR G+K VILP+ N KDL ++P V L +L +++VL A
Sbjct: 710 GRVLPIGGLKEKTLSAHRAGLKTVILPKDNEKDLADIPDTVKRDLRFVLVSHLDEVLPHA 769
Query: 816 FEG 818
G
Sbjct: 770 LVG 772
>gi|258646882|ref|ZP_05734351.1| ATP-dependent protease La [Dialister invisus DSM 15470]
gi|260404321|gb|EEW97868.1| ATP-dependent protease La [Dialister invisus DSM 15470]
Length = 779
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 311/661 (47%), Positives = 421/661 (63%), Gaps = 55/661 (8%)
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
AD IS + +L+ D+ RL +D +Q R+ +I +V ++ K Q
Sbjct: 172 ADFISTQMPISPARRQAVLEENDVMERLVLIRRFLDEEIQIGRLEAEINGEVRSRMEKEQ 231
Query: 216 KEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQ 275
+++ LRQ++++I + LGD + + +K++ +G+P K ++KE+ L M P
Sbjct: 232 RDYYLRQKIKSIHDRLGDEISQDAEAEEYRQKLEKSGIPDEYKKKLEKEIAHLATMPPMM 291
Query: 276 PGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK 335
T +R YLE I LPW++ S+++ LDLK A + LD DHYGL ++K+RI+EYLAVR L
Sbjct: 292 AETTVARNYLEWIFSLPWKEESKDL-LDLKKAAKLLDEDHYGLAKIKERILEYLAVRILA 350
Query: 336 PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPG 395
P+A+ P++CFVGPPGVGKTS A SIA AL +KF RISLGG+ DEA+IRGHRRTYIGSMPG
Sbjct: 351 PEAKAPIICFVGPPGVGKTSFARSIARALDKKFARISLGGIHDEAEIRGHRRTYIGSMPG 410
Query: 396 RLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 455
R I+ + NP++LLDEIDK GSD RGDPASALLE LDPEQNK F+D+Y+++PFDLS
Sbjct: 411 RFIEAIAHAKTKNPLLLLDEIDKVGSDFRGDPASALLEALDPEQNKAFHDNYIDIPFDLS 470
Query: 456 KVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI 515
KV FVATAN IP LLDRME+IEL GYT EEK++IA ++LIPR +++GL + L
Sbjct: 471 KVFFVATANTVSTIPAALLDRMELIELSGYTEEEKVQIAKKYLIPRQRERNGLKTADLHF 530
Query: 516 PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLD 575
+A+++ +I+ YTREAGVR LER + AL R K+
Sbjct: 531 TDALLRKIIRSYTREAGVRELERTIGALCRKVGKKIV----------------------- 567
Query: 576 NRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAA 635
LAD + IP PL LE+ LGP +F A E +
Sbjct: 568 --LAD------KTIP----------------PLFA--KTLEEYLGPVKFLPL-AEEHESQ 600
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
G GL WT GGEV EA ++GKG L LTGQLGDV+KESA+ A T++R+RA +L L
Sbjct: 601 VGRVNGLAWTAAGGEVLDTEAITIKGKGNLILTGQLGDVMKESAETAYTYIRSRAKELGL 660
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
V N + D HIH P GAVPKDGPSAG+T+ TA+ S ++ ++VR DTAMTGE+TL
Sbjct: 661 VE----NFYETLDTHIHLPEGAVPKDGPSAGITMATAMASAYTGRKVRGDTAMTGEITLT 716
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
G VLP+GGVK+K+LAA ++GI++++LPE+N +D+ E+P +V LE I K ++DVL A
Sbjct: 717 GEVLPIGGVKEKVLAASQFGIRQILLPEKNKRDMEEIPQSVRKKLEFIYVKNVDDVLAHA 776
Query: 816 F 816
Sbjct: 777 L 777
>gi|302037219|ref|YP_003797541.1| ATP-dependent protease La [Candidatus Nitrospira defluvii]
gi|300605283|emb|CBK41616.1| ATP-dependent protease La [Candidatus Nitrospira defluvii]
Length = 798
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 322/751 (42%), Positives = 466/751 (62%), Gaps = 66/751 (8%)
Query: 70 YIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMEL 129
Y ++++GL RF + +L Y AR+ L EQ + AL R EL
Sbjct: 90 YNILIQGLERFVLLKLDQMDPYLQARVKQLAPPS------EQSTEVEALHRAILDIITEL 143
Query: 130 ISVLEQKQKTGGRTKVLLETVPI---HKLADIFVASFEISFEEQLVMLDS-VDLKVRLSK 185
+++ + E P+ +++A + + + E+QL+ + DL L
Sbjct: 144 PKLIQTPGVHEAVAALGTEEDPVVLAYRIASLL--NLTLDGEQQLLAAPTRADLLRGLYA 201
Query: 186 ATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALE 245
A + R +Q +++ +KIT + +L K+Q+E+LLR+Q++ I++ELG+ + +ED++ AL
Sbjct: 202 A---LSREVQILQLRDKITSEAREKLGKTQREYLLREQLKTIQQELGEGNGEEDEVGALR 258
Query: 246 RKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLK 305
K+Q A +P ++ K +EL RL K P + R YLEL+ +LPW+K+SEE LDL
Sbjct: 259 TKIQEADLPEHVRKETDRELARLAKTPSASPEHQVIRSYLELVLELPWKKSSEE-GLDLA 317
Query: 306 AAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALG 365
++ L+ DHYG+ VK+RI+E+LAV KL P A+ P+LC VGPPGVGKTSL SIA A+G
Sbjct: 318 HVRKVLNEDHYGIKEVKERIVEHLAVLKLNPSAKAPILCLVGPPGVGKTSLGQSIAKAMG 377
Query: 366 RKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRG 425
R F R SLGG+ DE ++RGHRRTY+G++PGR+I ++R GV NPV++LDE+DK G D RG
Sbjct: 378 RTFERFSLGGLHDEGELRGHRRTYVGALPGRIIQAVRRAGVNNPVIMLDEVDKLGRDFRG 437
Query: 426 DPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGY 485
DPA+ALLE+LDP QN TF DHYL++PFDLSKV F+ TAN + + PLLDRME+I L GY
Sbjct: 438 DPAAALLEILDPAQNHTFRDHYLDLPFDLSKVFFITTANTLETLSQPLLDRMEIIRLNGY 497
Query: 486 TPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALAR 545
+ EK IA+R+L PR L + GL +E + +PEA++ +I RYTRE+GVR LE+ L + R
Sbjct: 498 SEREKREIALRYLWPRRLKEAGLRAEEVNLPEAVLDQIIGRYTRESGVRQLEQMLGRITR 557
Query: 546 AAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
AV A++ + SP
Sbjct: 558 KVAVTFADRPE-------------NSP--------------------------------A 572
Query: 606 SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGEL 665
+P+ + +++L++ LG RF EA + + A G++ GL WT GG+V ++E T + G EL
Sbjct: 573 APVDITQSLLDEWLGQERFQPEEARKNLPA-GVATGLAWTPTGGDVLYIETTLLPGSHEL 631
Query: 666 HLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSA 725
LTGQLGDV++ESA+ A +++ + A + L ++ + +HIH P+GA+PKDGPSA
Sbjct: 632 TLTGQLGDVMQESARAARSYLWSHAESMGL----DISRFKRNGVHIHVPSGAIPKDGPSA 687
Query: 726 GVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERN 785
G+T+ TAL S + K VR+DTAMTGE++L GLVLPVGG+K+K+LAAHR GI+R+ILP+ N
Sbjct: 688 GITMATALASAYVGKPVRSDTAMTGEISLTGLVLPVGGIKEKVLAAHRAGIRRIILPKAN 747
Query: 786 LKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
KDL EVP V L +I R+E+VL AF
Sbjct: 748 EKDLKEVPQEVRDELTVIPVDRIEEVLPAAF 778
>gi|156742524|ref|YP_001432653.1| ATP-dependent protease La [Roseiflexus castenholzii DSM 13941]
gi|302425070|sp|A7NM80.1|LON_ROSCS RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|156233852|gb|ABU58635.1| ATP-dependent protease La [Roseiflexus castenholzii DSM 13941]
Length = 802
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 465/767 (60%), Gaps = 89/767 (11%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R + P G V +V +G R +++L Y AR++ + +DP L
Sbjct: 84 RMLRLPHGAVQILV--QGQARIQIRQLIVTEPYPQARVA-----------IHRDP--AVL 128
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHK-----LADIFVASFEISFEEQLVM 173
S + A ++ +Q + L V + LAD+ A+ + E+Q ++
Sbjct: 129 SVEVSGLARAALAAFQQIIQLSPTLPDELAIVAANTAQPGMLADLIAANLNLKPEDQQLV 188
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
LD++D++ RL + ++R + + I +K + ++SKSQ+E++LRQQ+ AIK ELG+
Sbjct: 189 LDTLDVQERLRQVLSFLEREREIL----TIGRKAQEEMSKSQREYVLRQQLEAIKRELGE 244
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
DD ++ L R++++A +P K ++E+ RL++M P Y +R YL+ + DLPW
Sbjct: 245 TDDHAAEIAELRRRLEAANLPEEARKEAEREISRLERMPPGAAEYVVARTYLDWLLDLPW 304
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD------ARGPVLCFVG 347
++E+ +LDL A++ LD DHY L R+K+RIIEYLAVRKL+ + ARGP+LCFVG
Sbjct: 305 NVSTED-NLDLTQARQVLDEDHYDLERIKERIIEYLAVRKLRLEQDASGSARGPILCFVG 363
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL +SIA ALGRKF+R++LGGV+DEA+IRGHRRTYIG++PGR+I G+ R G
Sbjct: 364 PPGVGKTSLGTSIARALGRKFVRVALGGVRDEAEIRGHRRTYIGALPGRIIQGINRAGSN 423
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDE+DK +GDPA+ALLEVLDPEQN F D YL+VPFDLS+ +F+ TANR+
Sbjct: 424 NPVFMLDEVDKLSVGFQGDPAAALLEVLDPEQNVAFVDRYLDVPFDLSRALFICTANRSD 483
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
IPP LLDRME++EL GYT EKL I R+LI R ++ GL I EA ++ +I+ Y
Sbjct: 484 TIPPALLDRMELLELAGYTEMEKLEICRRYLIQRQRNEQGLAERAPTITEAALRRLIREY 543
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
T EAGVR+LER + A+ R A + AE G PL D
Sbjct: 544 THEAGVRDLERRIGAIYRKMATRAAE----------------GQPLPDQ----------- 576
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDRE--AAERVAAPGISVGLVWT 645
VD L+ +LGPPRF + V G+ GL WT
Sbjct: 577 ----------------------VDAPDLDDLLGPPRFRSETLLGEDEV---GVVTGLAWT 611
Query: 646 NFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQ 705
GG+V FVEA+ + G G+L LTGQLGDV+KESA+ ALT+ R+RA L + + Q
Sbjct: 612 PTGGDVLFVEASVVPGNGQLTLTGQLGDVMKESARAALTYARSRARALNI----PTDFAQ 667
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
DIHIH PAGAVPKDGPSAG+T+ +AL+S + +R AMTGE+TLRG VLP+GGVK
Sbjct: 668 ICDIHIHVPAGAVPKDGPSAGITMASALISALTDRRAYKHVAMTGEITLRGKVLPIGGVK 727
Query: 766 DKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
+K+LAA R G++ V+LP+ N DL E+P ++I+L + M++VL
Sbjct: 728 EKVLAAQRAGVRTVLLPKANAPDLRELPEETRQQIDIVLVEHMDEVL 774
>gi|297529186|ref|YP_003670461.1| ATP-dependent protease La [Geobacillus sp. C56-T3]
gi|297252438|gb|ADI25884.1| ATP-dependent protease La [Geobacillus sp. C56-T3]
Length = 775
Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust.
Identities = 323/786 (41%), Positives = 478/786 (60%), Gaps = 85/786 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G AR L ++ P+G T+ V++EG+ R + E+ + Y+ +
Sbjct: 68 YKMGTIARVKQL---LKLPNG--TFRVLVEGVARALITEVISEEPYFLVK---------- 112
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-----LLETVPIHKLADIFV 160
VE+ D A + +A ++ EQ R V +++ ++ADI
Sbjct: 113 ---VEKFADRAAKDLEDEALKRTMLEYFEQYINLSKRLSVDIYASIVDIDEPGRMADIIA 169
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ + EE+ +L+++D+K RL+K +++ + +++ +KI+ +V+ + ++QKE+ L
Sbjct: 170 SHLPLKLEEKQRILETIDVKERLNKIIQILHNEKEVLQLEKKISARVKQSMERTQKEYYL 229
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
R+QM+AI++ELG+ + ++ L+ K+++AGMP ++ + KEL R +K+
Sbjct: 230 REQMKAIQKELGEKEGKTGEVEELKEKIEAAGMPEHVKQTALKELDRYEKIPATSAESAV 289
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + LPW K +E+I D+K A+ L+ +HYGL +VK+R++E+L+V++L +G
Sbjct: 290 IRNYLDWLIALPWSKETEDIH-DIKRAEAILNEEHYGLDKVKERVLEFLSVKQLTKSLKG 348
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC GPPGVGKTSLA SIA ALGR+F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G
Sbjct: 349 PILCLAGPPGVGKTSLARSIAKALGRRFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQG 408
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+K+ G NPV LLDEIDK SD RGDP++A+LEVLDPEQN TF+DHY+ P+DLSKV+F+
Sbjct: 409 MKKAGTINPVFLLDEIDKMSSDFRGDPSAAMLEVLDPEQNHTFSDHYIEEPYDLSKVMFI 468
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
ATAN IP PLLDRMEVI +PGYT EEKL IA RHL+P+ + +HGL LQI + +
Sbjct: 469 ATANHLAAIPQPLLDRMEVIHIPGYTEEEKLHIAKRHLLPKQITEHGLKKAALQIRDDAM 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR LER LAA+ R AA + E+++
Sbjct: 529 LDIIRHYTREAGVRELERQLAAICRKAARLIVSGEKKR---------------------- 566
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLG--PPRFDDREAAERVAAPGI 638
+V+ E LE+ LG R+ EA ++V G+
Sbjct: 567 ---------------------------VVITENNLEEFLGKRKYRYGRAEAEDQV---GV 596
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
+ GL +T FGG+ +E + G G+L LTG+LGDV+KESAQ A ++VR+RA +L +
Sbjct: 597 ATGLAYTAFGGDTLAIEVSLAPGNGKLVLTGKLGDVMKESAQAAFSYVRSRAEELDI--- 653
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ DIHIH P GAVPKDGPSAG+T+ TAL+S + K V MTGE+TLRG V
Sbjct: 654 -DPKFHEKYDIHIHVPEGAVPKDGPSAGITIATALISALTGKPVSRFVGMTGEITLRGRV 712
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
L +GG+K+K L+AHR G+K VILP+ N KDL ++P V L +L +++VL A G
Sbjct: 713 LAIGGLKEKTLSAHRAGLKTVILPKDNEKDLADIPETVKRDLRFVLVSHLDEVLPHALVG 772
Query: 819 GCPWRQ 824
W++
Sbjct: 773 ---WKR 775
>gi|387929927|ref|ZP_10132604.1| ATP-dependent protease La [Bacillus methanolicus PB1]
gi|387586745|gb|EIJ79069.1| ATP-dependent protease La [Bacillus methanolicus PB1]
Length = 775
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 313/767 (40%), Positives = 464/767 (60%), Gaps = 87/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-----------MTKIEMEQVEQD 112
P+G T V++EGL R V YY + + E + + +E EQ
Sbjct: 82 PNG--TIRVLVEGLKRAEVVSFFDEADYYLVSLRTYEDRETKDAEDQALMRTMLEYFEQ- 138
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I +S++ A ++ +E+ GR +ADI + + +E+
Sbjct: 139 --YIKMSKKISAETYSSVADIEEP----GR------------MADIISSHLPLKLKEKQE 180
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L++VD+K R+++ E++ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELG
Sbjct: 181 ILETVDIKERMNRIIEILHNEKEVLNLEKKIGQRVKRSMERTQKEYYLREQMKAIQKELG 240
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
+ + ++ L K++ AGMP ++ KEL R +K+ R Y+E + LP
Sbjct: 241 EKEGKTGEIAELTEKIEQAGMPEHVKATALKELDRYEKVPSTSAESAVIRNYIEWLISLP 300
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W K +++ DLD++ A+ LD DHYGL +VK+R++EYLAV++L +GP+LC GPPGVG
Sbjct: 301 WTKKTDD-DLDIRKAERILDKDHYGLEKVKERVLEYLAVQQLTRSLKGPILCLAGPPGVG 359
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSLA SIA++L R F+RISLGGV+DE++IRGHRRTY+G+MPGR+I G+++ G NPV L
Sbjct: 360 KTSLARSIATSLNRNFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMRKAGTINPVFL 419
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDE+DK SD RGDP++ALLEVLDPEQN F+DH++ P+DLSKV+F+ATAN IP P
Sbjct: 420 LDEVDKMSSDFRGDPSAALLEVLDPEQNHNFSDHFIEEPYDLSKVMFIATANDLSTIPGP 479
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DRME+I + GYT EK+ IA HL+P+ + +HGL LQ+ E ++ VI+ YTREAG
Sbjct: 480 LRDRMEIITIAGYTEIEKIHIAKDHLLPKQIKEHGLTKSQLQVREDAIQKVIRHYTREAG 539
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VR LER +AA+ R A + E+++ + S K+V
Sbjct: 540 VRGLERQVAAICRKTAKIIVSGEKKRVVVSEKNVEEF----------------------- 576
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
LG P+F + AE G++ GL +T GG+
Sbjct: 577 --------------------------LGKPKFRYGQ-AELEDQVGVATGLAYTTVGGDTL 609
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
+E + GKG+L LTG+LGDV+KESAQ A ++VR++A +L + N + DIHIH
Sbjct: 610 HIEVSLSPGKGKLVLTGKLGDVMKESAQAAFSYVRSKAKELGIEE----NFHEKYDIHIH 665
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
P GAVPKDGPSAG+T+ TALVS S K ++ + MTGE+TLRG VLP+GGVK+K L+AH
Sbjct: 666 VPEGAVPKDGPSAGITIATALVSALSGKPIKKEVGMTGEITLRGRVLPIGGVKEKTLSAH 725
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
R G+ ++ILP+ N KD+ ++P +V L+ +L +++VL+ A GG
Sbjct: 726 RAGLTKIILPKENEKDIDDIPESVRDDLDFVLVSHVDEVLKHALGGG 772
>gi|310643602|ref|YP_003948360.1| ATP-dependent protease la [Paenibacillus polymyxa SC2]
gi|309248552|gb|ADO58119.1| ATP-dependent protease La [Paenibacillus polymyxa SC2]
gi|392304352|emb|CCI70715.1| ATP-dependent protease La [Paenibacillus polymyxa M1]
Length = 778
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 321/765 (41%), Positives = 460/765 (60%), Gaps = 89/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPD--------- 114
P+G T V++EGL R + + + YY L E E V+ + D
Sbjct: 84 PNG--TIRVLVEGLERAEIIQYTDNEEYYEVMAKELH----EAENVQPETDALMRTVLTQ 137
Query: 115 ---FIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQL 171
+I LS++ + +S +E+ GR LAD+ + + +E+
Sbjct: 138 FEHYINLSKKVTPETLAAVSDIEEP----GR------------LADVITSHLTLKIKEKQ 181
Query: 172 VMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL 231
+L+++D+ RL K ++++ + + + KI Q+V+ Q+ K+QKE+ LR+QM+AI++EL
Sbjct: 182 DILETIDVTQRLEKLLDILNNEREVLELERKINQRVKKQMEKTQKEYYLREQMKAIQKEL 241
Query: 232 GDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADL 291
G+ + ++ L ++ +P + + V+KE+ RL+KM + R Y++ + L
Sbjct: 242 GEKEGRAGEVEELRNQLSERELPVPVKEKVEKEIDRLEKMPASSAEGSVIRNYVDWLLSL 301
Query: 292 PWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGV 351
PW K +++ DLD+ A+E LD+DHYGL + K+R++EYLAVRKL +GP+LC VGPPGV
Sbjct: 302 PWNKFTDD-DLDIVKAEEILDNDHYGLDKPKERVLEYLAVRKLVKTIKGPILCLVGPPGV 360
Query: 352 GKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVM 411
GKTSLA SIA ++GR+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV
Sbjct: 361 GKTSLARSIAKSMGREFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGTSNPVF 420
Query: 412 LLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPP 471
LLDEIDK SD RGDP++ALLEVLDPEQN TF+DH++ +PFDLS V+FV TAN A IP
Sbjct: 421 LLDEIDKMASDFRGDPSAALLEVLDPEQNNTFSDHFVELPFDLSNVMFVTTANAAHNIPR 480
Query: 472 PLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREA 531
PL+DRME + +PGYT EKL IA R+L+P+ +HGLG E L I E + VI+ YTRE+
Sbjct: 481 PLMDRMETLYIPGYTELEKLEIANRYLLPKQKREHGLGEEQLVIGEDTLLRVIREYTRES 540
Query: 532 GVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPM 591
GVRNLE+ +A+L R AA V G E +E+ P
Sbjct: 541 GVRNLEQQMASLCRKAAKSV---------------------------VSGGEGPIEITPD 573
Query: 592 GESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEV 651
L+ LG +F AE G GL WT GGE
Sbjct: 574 N----------------------LKDYLGIAKF-RYGVAELEDQIGTVTGLAWTEVGGET 610
Query: 652 QFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHI 711
+E T + G G+L LTG+LGDV+KESAQ A ++ R++A DL + ++ + DIHI
Sbjct: 611 LMIEVTVVPGSGKLILTGKLGDVMKESAQAAFSYTRSKAVDLGI----ELDFYEKNDIHI 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA+PKDGPSAG+T+ TAL+S + + V D AMTGE+TLRG VLP+GG+K+K LAA
Sbjct: 667 HIPEGAIPKDGPSAGITIATALISALTNRHVSKDVAMTGEITLRGRVLPIGGLKEKSLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
HR G K+++LP+ N +DL ++P ++ +E + M+ VL+ A
Sbjct: 727 HRAGYKKILLPKDNERDLKDIPDSIRQDVEFVPVAHMDQVLKHAL 771
>gi|392427521|ref|YP_006468515.1| ATP-dependent proteinase [Desulfosporosinus acidiphilus SJ4]
gi|391357484|gb|AFM43183.1| ATP-dependent proteinase [Desulfosporosinus acidiphilus SJ4]
Length = 806
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 338/755 (44%), Positives = 455/755 (60%), Gaps = 68/755 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T V++EG+ R V E ++ R+ + K M E + ++ QF+
Sbjct: 80 PGG--TMRVLVEGISRGHVAEFLQEEPFFKVRVEEIIEKKKPM-STETETLIRGMTHQFE 136
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
A L ++ VL P +LADI + + ++ +L+++++ R+
Sbjct: 137 EYAK-----LSKRVPVETLGTVLSVEEP-GQLADIVASHLNLKVPDKQTILEALEINERI 190
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
+ TEL+ R ++ + + +I +V Q+ K+QKE+ LR+Q++AI++ELGD D+ + +
Sbjct: 191 ERLTELIMREIEIMELERRIGLRVRKQMDKAQKEYYLREQIKAIQKELGDKDERQVEADE 250
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
K+ A P + + KE+ RL+KM P T R YL+ + LPW K S + +D
Sbjct: 251 YREKVAKAKCPKEVEQKALKEIERLEKMPPSSAEGTVVRTYLDWLLVLPWTKTSRD-KID 309
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L A++ L+ DHYGL +VK+RI+E+LAVRKL P + P+LC VGPPGVGKTSLA SIA +
Sbjct: 310 LVKAEDILNEDHYGLEKVKERILEFLAVRKLTPKMKSPILCLVGPPGVGKTSLAKSIARS 369
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L RKF+R+SLGG++DEA+IRGHRRTYIG++PGR+I G++ G N V LLDEIDK SD
Sbjct: 370 LDRKFVRMSLGGLRDEAEIRGHRRTYIGALPGRIIQGIRTAGTRNSVFLLDEIDKMSSDF 429
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDPASALLEVLDPEQN F DHYL VPFDLS+ FV TAN IP PLLDRMEVI +
Sbjct: 430 RGDPASALLEVLDPEQNANFTDHYLEVPFDLSQTFFVLTANTLDTIPRPLLDRMEVISIS 489
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT +EK+ IA R+L+P+ HGL + L + E M+ +IQ YTRE+GVRNLER +A L
Sbjct: 490 GYTEDEKVNIAKRYLVPKQKKAHGLKEDVLSVDEEMLLKIIQNYTRESGVRNLERQIANL 549
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AV+ ++E E H L L D A GA
Sbjct: 550 CRKIAVRWVKEEWE--------AHDLT--LEDIETALGA--------------------- 578
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAP--GISVGLVWTNFGGEVQFVEATAMRG 661
PR+ + AA+ AP G GL +T GG V +E T + G
Sbjct: 579 ------------------PRYHFQVAAK---APEIGAVTGLAFTEVGGVVLTIEVTPLPG 617
Query: 662 KGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKD 721
KG L LTG+LGDV+KESAQ A T++RA A +L + ED + D+HIH P GAVPKD
Sbjct: 618 KGHLTLTGKLGDVMKESAQAAWTFIRAYALELG-IEED---FYEHTDLHIHVPEGAVPKD 673
Query: 722 GPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVIL 781
GPSAG+T+ TA+ S S++ VRAD AMTGE+TLRG VLP+GGVK+K+LAAHR GIK V+L
Sbjct: 674 GPSAGITMATAMASALSKRAVRADLAMTGEITLRGNVLPIGGVKEKVLAAHRAGIKVVLL 733
Query: 782 PERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
PE N KDL E+P V LE R+E+VL+ A
Sbjct: 734 PEENRKDLEEIPEKVRKLLEFHFVSRIEEVLKLAL 768
>gi|408823478|ref|ZP_11208368.1| ATP-dependent serine proteinase La [Pseudomonas geniculata N1]
Length = 817
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 340/774 (43%), Positives = 473/774 (61%), Gaps = 64/774 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V++EGL R V T+ R SL +E++
Sbjct: 72 GTLAQVLQL---LKLPDG--TIKVLVEGLSRVQV-------THVDERNGSLHGQAVEIDA 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFVASF 163
++ +R+ +A A L+S+ EQ KT + LL+T+ +LAD A
Sbjct: 120 TDERE-----AREVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPARLADTIAAHI 174
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ ++ +L+++ + RL LVD + ++ ++I +V+ Q+ KSQ+E+ L +Q
Sbjct: 175 SVRLADKQRLLETLAVGDRLEMLVGLVDGEIDVQQMEKRIRGRVKSQMEKSQREYYLNEQ 234
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P R
Sbjct: 235 MKAIQKELGDLDDAPGELEELARKIAEAGMPKAVEAKARNELNKLKQMSPMSAEAAVVRN 294
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YLE + +PW+K S+ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +GP+L
Sbjct: 295 YLEWLLGVPWKKRSK-VRKDLKVAQDTLDADHYGLEKVKERILEYLAVQSRVKQMKGPIL 353
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++ L +
Sbjct: 354 CLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQNLNK 413
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V+FVAT+
Sbjct: 414 VGSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEVMFVATS 473
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E L+I ++ +
Sbjct: 474 NSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIKANGLQPEELEIGSDAIQDI 532
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
++ YTRE+GVRNLER +A + R ++A L P
Sbjct: 533 VRYYTRESGVRNLEREIAKICRKVVKEIA----------------LAGPQ---------- 566
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
P ++ + + S V L+K LG RFD A E G+ GL
Sbjct: 567 ------PAAKAKKGAKKSKALVS---VSSKNLDKYLGVRRFDFGRAEEENEI-GLVTGLA 616
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ +E+T + GKG+L LTGQLG+V+KESA AL+ VR+RA + + +
Sbjct: 617 WTEVGGDLLQIESTLVPGKGQLILTGQLGNVMKESASAALSVVRSRAVGFGIDS----DF 672
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
LQ D+H+H P GA PKDGPSAG +VT+LVS+ ++ VRAD AMTGE+TLRG V +GG
Sbjct: 673 LQKHDVHLHVPDGATPKDGPSAGAAMVTSLVSMLTKVPVRADVAMTGEITLRGRVTAIGG 732
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAA R GI+ VI+PE N KDL ++PA V LEI+ K +E+VL+ A E
Sbjct: 733 LKEKLLAALRGGIRTVIIPEENRKDLADIPANVTRDLEIVPVKYIEEVLDLALE 786
>gi|309792115|ref|ZP_07686588.1| ATP-dependent protease La [Oscillochloris trichoides DG-6]
gi|308225859|gb|EFO79614.1| ATP-dependent protease La [Oscillochloris trichoides DG6]
Length = 806
Score = 581 bits (1497), Expect = e-163, Method: Compositional matrix adjust.
Identities = 302/660 (45%), Positives = 428/660 (64%), Gaps = 56/660 (8%)
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LAD+ ++ IS + +L++VD + RL + +L+ + L + + +I +V+ ++ +S
Sbjct: 184 LADLIASTLPISSTNRQQILETVDPEERLHRVMQLLTQELDLLELENRIQSQVQKEVDRS 243
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
Q+E LR+Q++ I+ ELG +D ++ +L ++ +AG+P V EL RL+ M
Sbjct: 244 QREIFLREQLKMIQRELGQDDPAHREVNSLRSRLVAAGLPEYARHRVDDELARLEAMPTM 303
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
P Y+ R YL+ +A LPW +++ DL+ A + LD +H+GL +VK+RIIE++AVR+L
Sbjct: 304 SPEYSILRTYLDWMASLPWAHVTDD-QTDLREAAKVLDRNHFGLQKVKERIIEFIAVRQL 362
Query: 335 -KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
D + P+LCFVGPPGVGKTSL SIA LGR+F+R++LGGV DEA+IRGHRRTYIG+M
Sbjct: 363 VGSDQKAPILCFVGPPGVGKTSLGQSIAEVLGRRFVRLALGGVHDEAEIRGHRRTYIGAM 422
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR++ LK G NPV +LDE+DK G+D RGDP+SALLEVLDPEQN F+DHYL++PFD
Sbjct: 423 PGRIVQRLKESGTLNPVFMLDEVDKLGADFRGDPSSALLEVLDPEQNHAFSDHYLDLPFD 482
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS+ +F+ATAN A IP PLLDRMEVI+LPGYT EEKL+IA R LIP+ + +GL +
Sbjct: 483 LSRTLFIATANVAHDIPDPLLDRMEVIDLPGYTEEEKLQIAYRFLIPKQMKANGLAGLNI 542
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
++ ++ +I+ YT EAGVRNLER + ++ R A +VAEQ L +++ V R+
Sbjct: 543 HFSDSALRSIIRGYTYEAGVRNLEREIGSVCRKIARQVAEQRPPLQLVTTRAVERM---- 598
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LGPPRF+ A E+
Sbjct: 599 ---------------------------------------------LGPPRFEISVAEEQD 613
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G++ G+V+T GG+ +E + M GKG L LTGQLGD+++ESAQ AL+++RA A +L
Sbjct: 614 QV-GVATGMVYTGNGGDTMPIECSLMEGKGALMLTGQLGDIMQESAQAALSYIRAHAAEL 672
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ DG + DIHIH P GA PKDGPSAG+T+ TAL+S + + VR D AMTGEMT
Sbjct: 673 GI---DGKR-FEKVDIHIHVPEGATPKDGPSAGITIATALISALTGRTVRRDVAMTGEMT 728
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GGVK+K+L A+R G+++VILP +N +DLVE+P AV L ++E+VL+
Sbjct: 729 LRGRVLPIGGVKEKVLGAYRSGVRQVILPRKNQRDLVEIPIAVRQKLAFTFVGQIEEVLD 788
>gi|344206262|ref|YP_004791403.1| anti-sigma H sporulation factor LonB [Stenotrophomonas maltophilia
JV3]
gi|343777624|gb|AEM50177.1| anti-sigma H sporulation factor, LonB [Stenotrophomonas maltophilia
JV3]
Length = 816
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 340/774 (43%), Positives = 473/774 (61%), Gaps = 65/774 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V++EGL R V T+ R SL +E++
Sbjct: 72 GTLAQVLQL---LKLPDG--TIKVLVEGLSRVQV-------THVDERNGSLHGQAVEIDA 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFVASF 163
++ +R+ +A A L+S+ EQ KT + LL+T+ +LAD A
Sbjct: 120 SDERE-----AREVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPARLADTIAAHI 174
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ ++ +L+++ + RL LVD + ++ ++I +V+ Q+ KSQ+E+ L +Q
Sbjct: 175 SVRLADKQRLLETLAVGDRLEMLVGLVDGEIDVQQMEKRIRGRVKSQMEKSQREYYLNEQ 234
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P R
Sbjct: 235 MKAIQKELGDLDDAPGELEELARKIAEAGMPKAVEAKARNELNKLKQMSPMSAEAAVVRN 294
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YLE + +PW+K S+ + DLKAA++ LD+DHYGL +VK+RI+EYLAV+ +GP+L
Sbjct: 295 YLEWLLGVPWKKRSK-VRKDLKAAQDTLDADHYGLEKVKERILEYLAVQSRVKQMKGPIL 353
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++ L +
Sbjct: 354 CLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQNLNK 413
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V+FVAT+
Sbjct: 414 VGSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEVMFVATS 473
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E L+I ++ +
Sbjct: 474 NSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIKANGLQPEELEIGSDAIQDI 532
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
++ YTRE+GVRNLER +A + R ++A L P
Sbjct: 533 VRYYTRESGVRNLEREIAKICRKVVKEIA----------------LAGPQ---------- 566
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
P+ + ++ V L+K LG RFD A E G+ GL
Sbjct: 567 ------PVKAKKGAKKSKALVS----VSSKNLDKYLGVRRFDFGRAEEENEI-GLVTGLA 615
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ +E+T + GKG+L LTGQLG+V+KESA AL+ VR+RA + + +
Sbjct: 616 WTEVGGDLLQIESTLVPGKGQLILTGQLGNVMKESASAALSVVRSRAVGFGIDS----DF 671
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
LQ D+H+H P GA PKDGPSAG +VT+LVS+ ++ VRAD AMTGE+TLRG V +GG
Sbjct: 672 LQKHDVHLHVPDGATPKDGPSAGAAMVTSLVSMLTKVPVRADVAMTGEITLRGRVTAIGG 731
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAA R GI+ VI+PE N KDL ++PA V LEI+ K +E+VL+ A E
Sbjct: 732 LKEKLLAALRGGIRTVIIPEENRKDLADIPANVTRDLEIVPVKYIEEVLDLALE 785
>gi|384217228|ref|YP_005608394.1| ATP-dependent protease LA [Bradyrhizobium japonicum USDA 6]
gi|354956127|dbj|BAL08806.1| ATP-dependent protease LA [Bradyrhizobium japonicum USDA 6]
Length = 797
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 320/764 (41%), Positives = 467/764 (61%), Gaps = 69/764 (9%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ R + P G T+ +V +G+ R + + + AR + E P+
Sbjct: 91 NIVRYITAPDG--THHIVCQGVQRARILDFLPGTPFLAARFQQIP------EPTTSSPEI 142
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
A + + A+E I +L Q + T LAD+ + +I +++ +L+
Sbjct: 143 EARALNLQRQAIEAIELLPQAPPE--LVAMFQSTTAPGALADLATSFMDIKPQDKQEVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
++DL +R+ K ++ + L+ +R++ +I QK + + Q+E +LR+QM I+ +LG+ D
Sbjct: 201 TIDLALRVEKVSKHLAERLEVLRISNEIGQKTKASFDERQREAILREQMATIQRQLGEGD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELIADLPWE 294
++ L + A MP H +KELRR ++M P+ G + R YL+ + +LPW
Sbjct: 261 GKAAEVAELTAAIAKANMPPEAEAHAKKELRRYERM-PEAAGESGMVRTYLDWLIELPWA 319
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKT 354
+E+ +D+K A+ LD+DH+GL ++K RIIEYLAVRKL P + P+LCFVGPPGVGKT
Sbjct: 320 LPAEK-PIDIKEARRILDADHFGLEKIKGRIIEYLAVRKLAPQGKAPILCFVGPPGVGKT 378
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
SL SIA A+ R F+R+SLGGV DEA+IRGHRRTYIG++PG +I G+K+ G N VM+LD
Sbjct: 379 SLGQSIARAMDRPFVRVSLGGVHDEAEIRGHRRTYIGALPGNIIQGIKKAGTRNCVMMLD 438
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
EIDK G V+GDP++A+LEVLDPEQN TF D+YL VPFDLS+V+F+ATAN IP PLL
Sbjct: 439 EIDKMGRGVQGDPSAAMLEVLDPEQNGTFRDNYLAVPFDLSRVVFIATANMLDQIPGPLL 498
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRME+I L GYT EEKL IA R+L+ R L+ +GL +E +I +KLV++ YTREAGVR
Sbjct: 499 DRMELISLAGYTEEEKLEIARRYLVRRQLEANGLTAEQAEIEPEALKLVVKGYTREAGVR 558
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVH-RLGSPLLDNRLADGAEVEMEVIPMGE 593
NLER + L R AAV++AE + + S KD+ LG P + +A
Sbjct: 559 NLEREIGKLFRHAAVQIAEGTAAKVVVSPKDIGIVLGQPRFEGEIA-------------- 604
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
+R + PG++ GL WT GG++ F
Sbjct: 605 -------------------------------------QRTSIPGVATGLAWTPVGGDILF 627
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+EA+ + G+G + LTGQLGDV++ES Q A+T V+++AT L + ++ + DIH+H
Sbjct: 628 IEASRVPGRGGMILTGQLGDVMRESVQAAMTLVKSKATQLGI----DPSVFEKNDIHVHV 683
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
PAGA PKDGPSAGV + TAL SL + + VR+DTAMTGE++LRGLVLPVGG+K+K++AA
Sbjct: 684 PAGATPKDGPSAGVAMFTALTSLLTNRTVRSDTAMTGEISLRGLVLPVGGIKEKVVAAAA 743
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
G+KRV+LP RN +D ++P + +LE I +R+++ + A E
Sbjct: 744 AGLKRVMLPARNKRDYDDIPKSARDNLEFIWLERVDEAIAAALE 787
>gi|193215292|ref|YP_001996491.1| ATP-dependent protease La [Chloroherpeton thalassium ATCC 35110]
gi|302425042|sp|B3QSJ7.1|LON_CHLT3 RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|193088769|gb|ACF14044.1| ATP-dependent protease La [Chloroherpeton thalassium ATCC 35110]
Length = 836
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 318/757 (42%), Positives = 466/757 (61%), Gaps = 65/757 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V+++G+ R V+ + Y A+++ + + E+E VE F A +R K A ++I
Sbjct: 119 VIVQGVKRVVVEAFTQTEPYLAAKVTPKD--EEELEGVE----FDAYARTTKQLASKII- 171
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FEISFEEQLVMLDSVDLKVRLSKATELV 190
E + ++++ + F+AS + E+ M+++ +K R + +
Sbjct: 172 --ELSPNSPNEASYAIQSIENTRFLIHFIASNISVPAAEKQKMIEAEGMKARAERLIHFL 229
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
+R +Q + ++++I KV+ + +SQ+EF+LRQQ++ I++ELG+ D D+ L ++
Sbjct: 230 NREVQVLELSKQIQTKVKTDMDRSQREFILRQQLKTIQQELGEQDAQMQDVEKLREAVEK 289
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
+P + V KE+ +L ++ P Y+ +R Y++ I LPW SE + ++L A++
Sbjct: 290 KNLPEEVTSVVSKEIDKLSRIPQASPDYSVTRNYVDTILALPWGHFSETV-INLHEAEKI 348
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
L+ DHYGL +VK RI+EYLAV KLK + + P+LCF GPPGVGKTSL SIA ALGRKFIR
Sbjct: 349 LNQDHYGLGKVKDRILEYLAVLKLKSNMKAPILCFCGPPGVGKTSLGRSIARALGRKFIR 408
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
ISLGGV+DEA+IRGHRRTYIGSMPGR+I G+K G NPV +LDEIDK G+D RG+P+SA
Sbjct: 409 ISLGGVRDEAEIRGHRRTYIGSMPGRIIQGIKTAGTSNPVFMLDEIDKIGADFRGNPSSA 468
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDP QN F+DHYL +P+DLSKV+F+ATAN PIP PL DRME+I L GYT EK
Sbjct: 469 LLEVLDPAQNNAFSDHYLEIPYDLSKVMFIATANTLDPIPVPLRDRMEIINLSGYTEYEK 528
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
L IA R+LIPR L++HG+ E + K +I YTREAGVRNLER +A + R A
Sbjct: 529 LHIAERYLIPRQLEEHGIRPEDVSFDALTTKKIINAYTREAGVRNLERQIANVCRVIA-- 586
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
KD+ + R +D + +P+ V
Sbjct: 587 -------------KDI-------VIRRESDQPD---------------------ETPITV 605
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
A L+K LG +F + +E V G++VGL WT GG++ F+E+T M+G G L LTGQ
Sbjct: 606 VTADLKKYLGMEQFYP-DVSEPVMLSGVAVGLAWTPVGGDILFIESTVMKGTGRLILTGQ 664
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESAQ AL+++++ A ++ E + D+H+H P GA+PKDGPSAGVT++
Sbjct: 665 LGDVMKESAQAALSYLKSCADYFKIPDE----AFRYWDVHVHVPQGAIPKDGPSAGVTIL 720
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDL- 789
T+L S++++++V+ AMTGE+TLRG +LPVGG+K+K+LAA R GI ++LPE+N KD+
Sbjct: 721 TSLASIYTQRKVKPCIAMTGEITLRGRILPVGGIKEKVLAAKRAGITEILLPEKNEKDVK 780
Query: 790 --VEVPAAVLASLEIILAKRMEDVLEQAF---EGGCP 821
+E + + M+D+++ E G P
Sbjct: 781 EALETNGGAFSDVSFKYFHEMDDLIDYVLEPAENGAP 817
>gi|225872282|ref|YP_002753737.1| endopeptidase LA [Acidobacterium capsulatum ATCC 51196]
gi|225793581|gb|ACO33671.1| endopeptidase LA [Acidobacterium capsulatum ATCC 51196]
Length = 808
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 346/806 (42%), Positives = 480/806 (59%), Gaps = 77/806 (9%)
Query: 25 RASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTY--IVVLEGLCRFSV 82
R S +Q+ S G + V+ VA R H+ +P+ Y + + + +
Sbjct: 48 RESSIQLIQSLGDEKTIVV------VAQRDAHMD--APQPADLYNYGTLATVHKVVKMPN 99
Query: 83 QELSTRGTYYTARISSLEMTKIE---MEQVEQDPDF-IALSRQFKATAMELISVLEQKQK 138
Q L T T R+ E T++E M VEQ + A + +A +IS +Q
Sbjct: 100 QSLFV-FTEGTERVHLGEFTQMEPFMMASVEQVQEIEPAAGPEREALQRNVISQFQQIVT 158
Query: 139 TGGRTKVLLETVPIH-----KLADIFVAS--FEISFEEQLVMLDSVDLKVRLSKATELVD 191
L+T+ ++ +L D +S F + ++Q +L++ D + RL + + +
Sbjct: 159 ASPTLSDELQTIAMNIEEPGRLVDFIASSLPFLTTIDKQ-ELLETPDAQARLERVNKHLA 217
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ L+ ++ KI +V+ Q+ +SQ+++ LR+Q++AI++ELG+ D+ + D+ L K+++A
Sbjct: 218 KELEVQQLRNKIQSEVQDQVQQSQRDYYLREQLKAIQKELGEADEGQKDIEELREKIEAA 277
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMP K KEL RL +M P Y+ +R Y+E +A LPW K+S +D+ AKE L
Sbjct: 278 GMPEETKKETLKELNRLSRMSPMAADYSLTRNYIEWLAVLPWAKSSGH-SVDIPKAKEIL 336
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DHY L RVK RI++YL+VR+LK D +GP+LCFVGPPGVGKTSL SIA AL RKF RI
Sbjct: 337 DEDHYDLKRVKDRILDYLSVRRLKADMKGPILCFVGPPGVGKTSLGRSIARALDRKFQRI 396
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGG+ DEA++RGHRRTYIG++PG++I ++R G +PV++LDEIDK G D RGDP+SAL
Sbjct: 397 SLGGMHDEAELRGHRRTYIGALPGQVIQNIRRAGTNDPVLMLDEIDKLGRDFRGDPSSAL 456
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQN TF D+YL+ PFDLSKV+F+ TAN PIP PL DRME+IEL GYT EEK
Sbjct: 457 LEVLDPEQNHTFRDNYLDQPFDLSKVLFICTANMLDPIPEPLRDRMEIIELQGYTEEEKR 516
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
IA R+LIPR + ++G+ E + PE V +++ YTREAGVR LE+ + + R A
Sbjct: 517 HIAFRYLIPRQVKENGIEMENIDFPEESVGYIVRHYTREAGVRKLEQLIGTVCRKQA--- 573
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
R+A+G ++ V P E HE ++
Sbjct: 574 ------------------------RRIAEGKTDKLVVTP--EVIHEFLGGIKVRV----- 602
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
D E AER PG++VGL WT GG+V F+EA M+GKG +TGQ+
Sbjct: 603 --------------DTEIAERTKRPGVAVGLAWTPAGGDVLFIEANRMKGKGGFTMTGQI 648
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
G V++ES Q ALTWVR+ A L L ED + D+HIH PAGA+PKDGPSAGVT+ T
Sbjct: 649 GQVMQESMQAALTWVRSNAAGLGL-EED---FTKDVDLHIHVPAGAIPKDGPSAGVTMAT 704
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
AL SL + + VR TAMTGE+TL G VLPVGG+K+K LAA R G+K VILP N ++ E
Sbjct: 705 ALASLLTNRAVRPLTAMTGEITLSGNVLPVGGIKEKFLAAKRAGVKHVILPAENKLNVEE 764
Query: 792 -VPAAVLASLEIILAKRMEDVLEQAF 816
+ + +EI A R+EDVL A
Sbjct: 765 DLTPEQIDGVEIHYASRIEDVLAVAL 790
>gi|333897648|ref|YP_004471522.1| anti-sigma H sporulation factor LonB [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112913|gb|AEF17850.1| anti-sigma H sporulation factor, LonB [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 774
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 315/748 (42%), Positives = 463/748 (61%), Gaps = 64/748 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R ++ L + ++Y + + KI+ E VE+D + AL R + E IS
Sbjct: 86 VLVEGISRAELKNLISDESFYEVEV----LEKIDSE-VEKDSELEALMRSVTSAFEEYIS 140
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
+ + V +E +LAD+ ++ ++ +L+ D + RL K +
Sbjct: 141 ISSKIPLDSIYNVVTIEEP--GRLADVIAEHLSLNQDKNQELLECFDPRERLEKLLGFIL 198
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ L + + +KI +V Q+ KSQ+E+ LR+Q++AI+ ELG+ D+ + ++ E K++S
Sbjct: 199 KELDILEIEKKINMRVHKQIDKSQREYYLREQLKAIRAELGEADEIDQEIDEYEEKIESK 258
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
+P + + ++ELRRL +M P + R Y++ + DLPW + ++++ LD+K A++ L
Sbjct: 259 DLPDYVKEKAREELRRLSRMGPGYQEASVIRTYIDWLLDLPWNEETKDV-LDIKRAEKIL 317
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
+ DHYGL +VK+RI+E+LAVR + P+LC VGPPGVGKTSL SIA A+ RKF+R+
Sbjct: 318 NEDHYGLKKVKERILEFLAVRSFHEKMKSPILCLVGPPGVGKTSLGKSIARAMNRKFVRL 377
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGV+DEA+IRGHRRTY+G++PG +I+ LK G NPV LLDEIDK SD RGDPASA+
Sbjct: 378 SLGGVRDEAEIRGHRRTYVGAIPGGIINSLKIAGSKNPVFLLDEIDKMSSDFRGDPASAM 437
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQN T+ DHY+++PFDLSKV+FV TAN IP PLLDRMEVI + GYT EEKL
Sbjct: 438 LEVLDPEQNSTYRDHYIDLPFDLSKVLFVTTANTLDTIPAPLLDRMEVIYISGYTEEEKL 497
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
IA +LIP++L +HG + ++I ++ + +I YTREAGVR+LE+N+A + R + +
Sbjct: 498 NIAKEYLIPKILKEHGANEDIIKIQDSAIVGIISEYTREAGVRSLEQNIAKVVRKSIKAI 557
Query: 552 AEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
E +++ K++ + LG P+ +R V
Sbjct: 558 VENKEKSIKVGKKNLQKYLGKPI----------------------------YR------V 583
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
D+A L+ + G+ GL WT GG+ VEAT M G G+L LTGQ
Sbjct: 584 DKANLKDKV-----------------GMVTGLAWTRVGGDTLTVEATTMPGSGKLTLTGQ 626
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESAQ +++R+ A L + ++ NL DIHIH P GA+PKDGPSAG+T+V
Sbjct: 627 LGDVMKESAQAGFSYIRSNADALGIDSDFYKNL----DIHIHVPEGAIPKDGPSAGITMV 682
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TA+VS + V+ D AMTGE+TL G VLP+GG+K+K+LAAHR GI +VI PE N +DL
Sbjct: 683 TAMVSAIKKVPVKGDIAMTGEITLTGKVLPIGGLKEKVLAAHRAGIFKVIAPEGNKRDLD 742
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEG 818
E+P +V +E +++VL+ + G
Sbjct: 743 EIPQSVKKKMEFKFVSNIDEVLKLSLVG 770
>gi|148656894|ref|YP_001277099.1| ATP-dependent protease La [Roseiflexus sp. RS-1]
gi|148569004|gb|ABQ91149.1| ATP-dependent protease La [Roseiflexus sp. RS-1]
Length = 802
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 335/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R + P G V +V +G R + +L Y AR+S + +DP L
Sbjct: 84 RMLRLPHGAVQILV--QGQARIQIMQLIVSEPYPQARMS-----------IHRDP--AVL 128
Query: 119 SRQFKATAMELISVLEQKQKTGGRTK-----VLLETVPIHKLADIFVASFEISFEEQLVM 173
S + A ++ +Q + V T LAD+ A+ + E+Q ++
Sbjct: 129 SVEVSGLARAALAAFQQIIQLSPTLPDELAIVAANTAQPGMLADLIAANLNLKPEDQQLV 188
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
LD++D++ RL + ++R + + I +K + ++SKSQ+E++LRQQ+ AI+ ELG+
Sbjct: 189 LDTLDVQDRLRQVLSFLEREREIL----TIGRKAQEEMSKSQREYVLRQQLEAIRRELGE 244
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
D+ ++ L R++++A +P K ++E+ RL++M P Y SR YL+ + DLPW
Sbjct: 245 TDEHAAEIAELRRRLEAANLPEEARKEAEREISRLERMPPGAAEYVVSRTYLDWLLDLPW 304
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD------ARGPVLCFVG 347
++E+ +LDL A++ LD DHY L R+K+RIIEYLAVRKL+ + ARGP+LCFVG
Sbjct: 305 NVSTED-NLDLAQARQVLDEDHYDLERIKERIIEYLAVRKLRLEQNATGSARGPILCFVG 363
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL +SIA ALGRKF+R++LGGV+DEA+IRGHRRTYIG++PGR+I G+ R G
Sbjct: 364 PPGVGKTSLGASIARALGRKFVRVALGGVRDEAEIRGHRRTYIGALPGRIIQGINRAGSN 423
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDE+DK +GDPA+ALLEVLDPEQN F D YL+VPFDLS+V+F+ TANR+
Sbjct: 424 NPVFMLDEVDKLSVGFQGDPAAALLEVLDPEQNAAFVDRYLDVPFDLSRVLFICTANRSD 483
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
IPP LLDRME++EL GYT EKL I R+LI R + GL I EA ++ +I+ Y
Sbjct: 484 TIPPALLDRMELLELAGYTEMEKLEICRRYLIQRQRSEQGLAERGPTITEAALRRLIREY 543
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
T EAGVR+LER + A+ R A + AE Q+LP
Sbjct: 544 THEAGVRDLERRIGAIYRKMATRAAEG---QSLPDQ------------------------ 576
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDRE--AAERVAAPGISVGLVWT 645
VD L+ +LGPPRF + V G+ GL WT
Sbjct: 577 ----------------------VDAPDLDDLLGPPRFRSETLLGEDEV---GVVTGLAWT 611
Query: 646 NFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQ 705
GG+V FVEA+ + G G+L LTGQLGDV+KESA+ ALT+ R+RA L + + Q
Sbjct: 612 PTGGDVLFVEASVVPGNGQLTLTGQLGDVMKESARAALTYARSRARSLNIPT----DFAQ 667
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
DIHIH PAGAVPKDGPSAG+T+ +AL+S + + R AMTGE+TLRG VLP+GGVK
Sbjct: 668 ICDIHIHVPAGAVPKDGPSAGITMASALISALTERPARKHVAMTGEITLRGKVLPIGGVK 727
Query: 766 DKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
+K+LAA R G+ V+LP+ N DL E+P LEIIL + M++VL
Sbjct: 728 EKLLAAQRAGVHTVLLPKANAPDLREIPEETRQHLEIILVEHMDEVL 774
>gi|392551112|ref|ZP_10298249.1| DNA-binding ATP-dependent protease La [Pseudoalteromonas spongiae
UST010723-006]
Length = 785
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 342/786 (43%), Positives = 474/786 (60%), Gaps = 82/786 (10%)
Query: 38 NQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARIS 97
++ E + G A L L ++ P G V V++EG R V+E + ++ A
Sbjct: 61 DEPEASDIYEVGTVATILQL---LKLPDGTVK--VLVEGTQRAVVKEFVSTDEFFVATAE 115
Query: 98 SLEMTKIEMEQVEQDPDFIALSRQF-------KATAMELISVLEQKQKTGGRTKVLLETV 150
LE T E+ + EQD + QF K A E++S ++ ++T
Sbjct: 116 FLEST--EIPEAEQDVFMRSAVSQFEGYVKLNKKIAPEVLSSVQGIEETA---------- 163
Query: 151 PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQ 210
+LAD A + E+ L+ D+K RL L++ + ++V +KI +V+ Q
Sbjct: 164 ---RLADTMAAHMPLKVSEKQKALEYADVKERLEFLMALMEGEIDLLQVEKKIRSRVKKQ 220
Query: 211 LSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKK 270
+ KSQ+E+ L +QM+AI++ELGD DD D+ L +K++ A MP+ + + EL +LK
Sbjct: 221 MEKSQREYYLNEQMKAIQKELGDMDDVPDEFEGLTKKIEEAAMPAEAEEKTKSELNKLKM 280
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
M P T R Y++ + +PW+K S+ + DL A+E LD+DHYGL +VK+RIIEYLA
Sbjct: 281 MSPMSAEATVVRTYIDTMIGVPWKKRSK-VKKDLAKAEEILDADHYGLDKVKERIIEYLA 339
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
V+ +GP+LC VGPPGVGKTSL SIA + GRK++R++LGGV+DEA+IRGHRRTYI
Sbjct: 340 VQHRTNKLKGPILCLVGPPGVGKTSLGQSIARSTGRKYVRMALGGVRDEAEIRGHRRTYI 399
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
GSMPG+++ + +VGV NP+ LLDEIDK SD+RGDP+SALLEVLDPEQN +FNDHYL V
Sbjct: 400 GSMPGKIVQNMSKVGVKNPLFLLDEIDKMSSDMRGDPSSALLEVLDPEQNTSFNDHYLEV 459
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
+DLS V+FVAT+N IP PLLDRMEVI L GYT +EKL I++RHLIP+ + ++GL
Sbjct: 460 DYDLSDVMFVATSNSFN-IPGPLLDRMEVIRLSGYTEDEKLNISIRHLIPKQIKRNGLKE 518
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
+ I ++ + +I+ YTREAGVR+LER ++ L R A +
Sbjct: 519 SEISIEDSAIIGIIRYYTREAGVRSLEREISKLCRKA---------------------VK 557
Query: 571 SPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAA 630
S LLD L +V++E LE LG R D A
Sbjct: 558 SILLDKSLKQ---------------------------VVINEDNLEDYLGVKRH-DYGKA 589
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARA 690
E G GL WT GG++ +E +M GKG+L+ TG LGDV++ES Q A+T VR+RA
Sbjct: 590 EDSNKVGQVTGLAWTEVGGDLLTIECASMAGKGKLNYTGSLGDVMQESIQAAMTVVRSRA 649
Query: 691 TDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTG 750
L+ + ED + RDIH+H P GA PKDGPSAG+ +VT LVS + VR++ AMTG
Sbjct: 650 EALR-INED---FYEKRDIHVHVPEGATPKDGPSAGIAMVTGLVSSLTGNPVRSEVAMTG 705
Query: 751 EMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMED 810
E+TLRG VLP+GG+K+K+LAAHR GIK VI+P+ N +DL E+P V+ L I KR+E+
Sbjct: 706 EITLRGEVLPIGGLKEKLLAAHRGGIKTVIIPKENERDLKEIPENVMEGLSIHPVKRIEE 765
Query: 811 VLEQAF 816
VLE A
Sbjct: 766 VLELAL 771
>gi|190573024|ref|YP_001970869.1| ATP-dependent protease [Stenotrophomonas maltophilia K279a]
gi|190010946|emb|CAQ44555.1| putative ATP-dependent protease [Stenotrophomonas maltophilia
K279a]
Length = 815
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 340/774 (43%), Positives = 471/774 (60%), Gaps = 66/774 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V++EGL R V T+ R SL +E+E
Sbjct: 72 GTLAQVLQL---LKLPDG--TIKVLVEGLSRVQV-------THVDERNGSLHGQAVEIEA 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFVASF 163
++ +R+ +A A L+S+ EQ KT + LL+T+ +LAD A
Sbjct: 120 TDERE-----AREVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPARLADTIAAHI 174
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ ++ +L+++ + RL LVD + ++ ++I +V+ Q+ KSQ+E+ L +Q
Sbjct: 175 SVRLADKQRLLETLAVGDRLEMLVGLVDGEIDVQQMEKRIRGRVKSQMEKSQREYYLNEQ 234
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P R
Sbjct: 235 MKAIQKELGDLDDAPGELEELARKIAEAGMPKAVEAKARNELNKLKQMSPMSAEAAVVRN 294
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YLE + +PW+K S+ + DLKAA++ LD+DHYGL +VK+RI+EYLAV+ +GP+L
Sbjct: 295 YLEWLLGVPWKKRSK-VRKDLKAAQDTLDADHYGLEKVKERILEYLAVQSRVKQMKGPIL 353
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++ L +
Sbjct: 354 CLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQNLNK 413
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V+FVAT+
Sbjct: 414 VGSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEVMFVATS 473
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E L+I ++ +
Sbjct: 474 NSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQVKANGLQPEELEIGSDAIQDI 532
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
++ YTRE+GVRNLER +A + R ++A L P
Sbjct: 533 VRYYTRESGVRNLEREIAKICRKVVKEIA----------------LAGPQ---------- 566
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
P+ + V L+K LG RFD A E G+ GL
Sbjct: 567 ------PVKAKKGAKKKAL-----VSVSSKNLDKYLGVRRFDFGRAEEENEI-GLVTGLA 614
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ +E+T + GKG+L LTGQLG+V+KESA AL+ VR+RA + + +
Sbjct: 615 WTEVGGDLLQIESTLVPGKGQLILTGQLGNVMKESASAALSVVRSRAVGFGIDS----DF 670
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
LQ D+H+H P GA PKDGPSAG +VT+LVS+ ++ VRAD AMTGE+TLRG V +GG
Sbjct: 671 LQKHDVHLHVPDGATPKDGPSAGAAMVTSLVSMLTKVPVRADVAMTGEITLRGRVTAIGG 730
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAA R GI+ VI+PE N KDL ++PA V L+I+ K +E+VL+ A E
Sbjct: 731 LKEKLLAALRGGIRTVIIPEENRKDLADIPANVTRDLKIVPVKYIEEVLDLALE 784
>gi|426405712|ref|YP_007024683.1| ATP-dependent protease La [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425862380|gb|AFY03416.1| ATP-dependent protease La [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 774
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 320/754 (42%), Positives = 456/754 (60%), Gaps = 67/754 (8%)
Query: 66 GRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKAT 125
GRV ++++G+ + V+ + + + +E T ++ VE + AL R K
Sbjct: 62 GRVK--ILIQGVAKGRVKNFTKTSPSFEVAVEKIEETPVQKTVVENE----ALIRTAKEH 115
Query: 126 AMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSK 185
+I++ + + VL + ++AD+ ++ I ++ +L++ D RL
Sbjct: 116 IERIIAL--GRPLSPDILLVLDDVSDPGRIADLIASNLGIKVDDAQKVLETSDATERLKL 173
Query: 186 ATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALE 245
E++ L+ ++ K + +SKSQ+E+ LR+QM+AIK ELG+ D +++ L
Sbjct: 174 VNEILAAELEVMQTQSKTRTGAKDDMSKSQREYFLREQMKAIKNELGEGDSKSEEMDELR 233
Query: 246 RKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLK 305
K+ +AGMP+++ K+L RL++M P T R YL+ +ADLPW K SE+ +DLK
Sbjct: 234 EKLVNAGMPTHVETEALKQLGRLERMHPDASEATMVRTYLDWMADLPWSKKSED-HIDLK 292
Query: 306 AAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALG 365
+KE LD DHY L + K RI+E+LAVRKLKP+ +GP+LCF GPPGVGKTSL SIA A+G
Sbjct: 293 RSKEILDEDHYELEKAKDRIMEFLAVRKLKPNLKGPILCFGGPPGVGKTSLGKSIARAMG 352
Query: 366 RKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRG 425
R++ RI+LGGVKDEA+IRGHRRTY+G+MPG++I L++ NPV++LDEIDK GSD RG
Sbjct: 353 REYFRIALGGVKDEAEIRGHRRTYVGAMPGKIIQALRQAKTSNPVIVLDEIDKLGSDFRG 412
Query: 426 DPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGY 485
DP++A+LEVLDPEQN TF D+YLNV FDLS V+F+ATAN + IPP L DRME++ +PGY
Sbjct: 413 DPSAAMLEVLDPEQNATFRDNYLNVDFDLSNVLFIATANVLENIPPALRDRMEILNIPGY 472
Query: 486 TPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALAR 545
T +KL I +HLI R ++ +G+ E + + +K +I YTREAG+RNLER + ++ R
Sbjct: 473 TENDKLLITKKHLIKRQIEANGITEENISFTDEGIKYLIAGYTREAGLRNLEREVGSVCR 532
Query: 546 AAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
A V +E A EV +P
Sbjct: 533 KVAKMVVMEE-----------------------AKFVEVNATTVP--------------- 554
Query: 606 SPLVVDEAMLEKVLGPPRF--DDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
++LGPPRF DD+ +V G+ GL WT GGEV +EA M+GKG
Sbjct: 555 -----------ELLGPPRFQRDDKFHDSQV---GVVQGLAWTQAGGEVLTIEALKMKGKG 600
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
L LTGQLGDV+KESA A+++ RA +L + ED D+H+H PAGA+PKDGP
Sbjct: 601 HLALTGQLGDVMKESAHAAMSYARAHQEELG-IPED---FFDKYDVHVHLPAGAIPKDGP 656
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+TL TALVSL + VR D AMTGE+TL+G VLPVGG+++K LAA GI +I+P
Sbjct: 657 SAGITLTTALVSLMTGTPVRHDIAMTGEVTLQGRVLPVGGIREKCLAALNLGITNIIIPM 716
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
KDL ++P + ILA+ +++V AF+
Sbjct: 717 ACQKDLADIPKVFKDKINFILAENLDEVFAVAFD 750
>gi|423719069|ref|ZP_17693251.1| ATP-dependent protease lonA [Geobacillus thermoglucosidans
TNO-09.020]
gi|383367972|gb|EID45247.1| ATP-dependent protease lonA [Geobacillus thermoglucosidans
TNO-09.020]
Length = 773
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/781 (40%), Positives = 478/781 (61%), Gaps = 84/781 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR--------IS 97
+ G AR L ++ P+G T+ V++EG+ R + E+ + Y+ +
Sbjct: 66 YKMGTLARVKQL---LKLPNG--TFRVLVEGIARAIITEIVSEEPYFMVKAEKFVDRTTK 120
Query: 98 SLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
LE ++ +E +I LS++ A I+ +++ GR +AD
Sbjct: 121 DLEDEALKRTMLEYFEQYINLSKRLSADIYASIADIDEP----GR------------MAD 164
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
I + + EE+ +L+++D+K R+ K +++ + +++ +KI+ +V+ + ++QKE
Sbjct: 165 IIASHLPLKLEEKQRILETIDVKERVHKIIQILHNEKEVLQLEKKISMRVKQSMERTQKE 224
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ LR+QM+AI++ELG+ + ++ L+ K+++AGMPS++ + KEL R +K+
Sbjct: 225 YYLREQMKAIQKELGEKEGKAGEVETLKEKIEAAGMPSHVKETALKELDRYEKIPATSAE 284
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + LPW +E+I D+K A+ L+ DHYGL +VK+R++E+L+V++L
Sbjct: 285 SAVIRNYLDWLIALPWSTQTEDIH-DIKRAEAILNEDHYGLEKVKERVLEFLSVQQLTKS 343
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC GPPGVGKTSLA SIA +L R+F+RISLGGV+DE++IRGHRRTY+G+MPGR+
Sbjct: 344 LKGPILCLAGPPGVGKTSLARSIAKSLNRRFVRISLGGVRDESEIRGHRRTYVGAMPGRI 403
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
I G+K+ G NPV LLDEIDK SD RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV
Sbjct: 404 IQGMKKAGTINPVFLLDEIDKMSSDFRGDPSAALLEVLDPEQNHAFSDHYIEEPYDLSKV 463
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+F+ATAN IP PLLDRME+I +PGYT EKL+IA RHL+P+ + +HGL LQI +
Sbjct: 464 MFIATANNLATIPQPLLDRMEIITIPGYTEVEKLQIAKRHLLPKQIKEHGLQKSALQIRD 523
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+ +I+ YTREAGVR LER LAA+ R AA + E+++ + + K++
Sbjct: 524 DAMMSIIRYYTREAGVRELERQLAAICRKAARFIVSGEKKRVIITEKNMEEF-------- 575
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
+G+ + R+ E ++V G
Sbjct: 576 -------------LGKKKY--------------------------RYGQAELEDQV---G 593
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
++ GL +T FGG+ +E + GKG+L LTG+LGDV+KESAQ A ++VR+RA L +
Sbjct: 594 VATGLAYTAFGGDTLSIEVSLAPGKGKLVLTGKLGDVMKESAQAAFSYVRSRAEQLGVDP 653
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
E + DIHIH P GAVPKDGPSAG+T+ TAL+S + + V MTGE+TLRG
Sbjct: 654 E----FHEKYDIHIHVPEGAVPKDGPSAGITIATALISALTGRPVSRFVGMTGEITLRGR 709
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VLP+GG+K+K L+AHR G+K+VILP+ N KDL ++P V L+ +L +++VL+ A
Sbjct: 710 VLPIGGLKEKTLSAHRAGLKKVILPKDNEKDLDDIPDVVKKDLQFVLVSHLDEVLQHALA 769
Query: 818 G 818
G
Sbjct: 770 G 770
>gi|421598921|ref|ZP_16042239.1| ATP-dependent protease La [Bradyrhizobium sp. CCGE-LA001]
gi|404268966|gb|EJZ33328.1| ATP-dependent protease La [Bradyrhizobium sp. CCGE-LA001]
Length = 807
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 339/810 (41%), Positives = 477/810 (58%), Gaps = 89/810 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + I+ G A L L ++ P G V V++EGL R VQ+ + R
Sbjct: 61 TQKNASDDDPAPDAIY--ETGTLASVLQL---LKLPDGTVK--VLVEGLERARVQKYTDR 113
Query: 89 GTYYTARISSLEMT---KIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRT 143
YY A +L T +E E + + DF + + K + E++ V++
Sbjct: 114 ADYYEATAVALADTDAKSVEAEALARSVVSDFESYVKLNKKISAEVVGVVQA-------- 165
Query: 144 KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
KLAD + + ++ +L+++ + RL K L++ + ++V ++I
Sbjct: 166 -----ITDFAKLADTVASHLAVKIADRQGILETLSVTTRLEKVLGLMESEISVLQVEKRI 220
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
+V+ Q+ K+Q+E+ L +QM+AI++ELGD DD D+L LE K+ + + Q
Sbjct: 221 RSRVKRQMEKTQREYYLNEQMKAIQKELGD-DDGRDELADLEEKISKTKLSKEAREKAQH 279
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL++L++M P T R YL+ + +PW K S+ + DL+AA+ LDSDHYGL +VK+
Sbjct: 280 ELKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLEAAQAILDSDHYGLEKVKE 338
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
RI+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IR
Sbjct: 339 RIVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIR 398
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TF
Sbjct: 399 GHRRTYIGSMPGKIIQSMRKAKSSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTF 458
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
NDHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ I+ +HLIP +
Sbjct: 459 NDHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTENEKVEISRKHLIPNAV 517
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+HGL S+ I + + L+I+RYTREAGVRNLER L+ LAR A +E +
Sbjct: 518 SKHGLDSKEFSIDDDALLLLIRRYTREAGVRNLERELSTLARKAV-------KELMISKK 570
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP- 622
K V V E LE++LG P
Sbjct: 571 KAVK------------------------------------------VTEKTLEELLGVPK 588
Query: 623 -RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
RF + E+ +V GI GL WT+ GGE+ +E M GKG++ +TG L DV+KES
Sbjct: 589 YRFGEIESEPQV---GIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA 645
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA + + L RDIH+H P GA PKDGPSAGV + TA++S+ +
Sbjct: 646 AASYVRSRAINYGVEPP----LFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIP 701
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ +E
Sbjct: 702 VRHDVAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGME 761
Query: 802 IILAKRMEDVLEQAF-EGGCP--WRQHSKL 828
II R++DV+ +A + P W + +K+
Sbjct: 762 IIPVSRLDDVVAKALVKKPTPIVWEEDTKV 791
>gi|384218433|ref|YP_005609599.1| ATP-dependent protease LA [Bradyrhizobium japonicum USDA 6]
gi|354957332|dbj|BAL10011.1| ATP-dependent protease LA [Bradyrhizobium japonicum USDA 6]
Length = 807
Score = 579 bits (1493), Expect = e-162, Method: Compositional matrix adjust.
Identities = 339/804 (42%), Positives = 478/804 (59%), Gaps = 79/804 (9%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q ASD + I+ G A L L ++ P G V V++EGL R VQ+ + R
Sbjct: 62 QKNASDDDPAPDAIY--ETGTLASVLQL---LKLPDGTVK--VLVEGLERARVQKYTDRS 114
Query: 90 TYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLET 149
YY A +++ + + + VE + ALSR + + + K+ + V+
Sbjct: 115 EYYEA--TAIALADTDAKSVEAE----ALSRSVVSDFESYVKL--NKKISAEVVGVVQAI 166
Query: 150 VPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEG 209
KLAD + + ++ +L+++ + RL K L++ + ++V ++I +V+
Sbjct: 167 TDFAKLADTVASHLAVKIADRQGILETLSVTTRLEKVLGLMESEISVLQVEKRIRSRVKR 226
Query: 210 QLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLK 269
Q+ K+Q+E+ L +QM+AI++ELGD DD D+L LE K+ + + Q EL++L+
Sbjct: 227 QMEKTQREYYLNEQMKAIQKELGD-DDGRDELADLEEKISKTKLSKEAREKAQHELKKLR 285
Query: 270 KMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYL 329
+M P T R YL+ + +PW K S+ + DL++A+ LDSDHYGL +VK+RI+EYL
Sbjct: 286 QMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLESAQAILDSDHYGLEKVKERIVEYL 344
Query: 330 AVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTY 389
AV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRGHRRTY
Sbjct: 345 AVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTY 404
Query: 390 IGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLN 449
IGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TFNDHYL
Sbjct: 405 IGSMPGKIIQSMRKAKSSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTFNDHYLE 464
Query: 450 VPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLG 509
V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP + +HGL
Sbjct: 465 VDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTENEKVEIARKHLIPNAVSKHGLD 523
Query: 510 SEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRL 569
S+ I + + L+I+RYTREAGVRNLER L+ LAR A +E + K V
Sbjct: 524 SKEFAIDDDALLLLIRRYTREAGVRNLERELSTLARKAV-------KELMISKKKSVK-- 574
Query: 570 GSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFDDR 627
V E LE++LG P RF +
Sbjct: 575 ----------------------------------------VTEKTLEELLGVPKYRFGEI 594
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E+ +V GI GL WT+ GGE+ +E M GKG++ +TG L DV+KES A ++VR
Sbjct: 595 ESEPQV---GIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISAAASYVR 651
Query: 688 ARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTA 747
+RA +V L RDIH+H P GA PKDGPSAGV + TA++S+ + VR D A
Sbjct: 652 SRA----IVYGIEPPLFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPVRHDVA 707
Query: 748 MTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKR 807
MTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ +EII R
Sbjct: 708 MTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMEIIPVSR 767
Query: 808 MEDVLEQAF-EGGCP--WRQHSKL 828
++DV+ +A + P W + +K+
Sbjct: 768 LDDVVAKALVKKPVPIVWEEDTKV 791
>gi|251790646|ref|YP_003005367.1| DNA-binding ATP-dependent protease La [Dickeya zeae Ech1591]
gi|247539267|gb|ACT07888.1| ATP-dependent protease La [Dickeya zeae Ech1591]
Length = 787
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 331/769 (43%), Positives = 467/769 (60%), Gaps = 86/769 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE IE + V Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPAIEEREQEVLMRTAVNQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDITERLEYLMAMMESEIDLLQVEKRIRGRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ SA MP + + EL++L+ M P T R Y++ + +PW+
Sbjct: 246 DAPDEQEALKRKIDSANMPKEAREKAEAELQKLRMMSPMSAEATVVRSYIDWMVQVPWQ- 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LDSDHYGL RVK+RI+EYLAV+ RGP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLTKAQEMLDSDHYGLERVKERILEYLAVQSRVSKIRGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIARQHLLPKQIERNALKKGELTVEDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + S ++D + ++ G++
Sbjct: 544 LEREISKLCRKA---------------------VKSLMMDKAIK-------HILITGDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAE--RVAAPGISVGLVWTNFGGEVQF 653
L++ LG R+D A E RV G GL WT GG++
Sbjct: 575 -------------------LKEYLGVQRYDYGRADEENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E ++ GKG+L TG LG+V++ES Q ALT VRARA L + + + + RDIH+H
Sbjct: 613 IETASVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINS----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
GIK V++PE N +DL E+P V+A L+I KR+E+VL A + P+
Sbjct: 729 GGIKTVLIPEENKRDLEEIPQNVIADLDIHPVKRIEEVLTLALQ-NAPY 776
>gi|254521571|ref|ZP_05133626.1| ATP-dependent protease La [Stenotrophomonas sp. SKA14]
gi|219719162|gb|EED37687.1| ATP-dependent protease La [Stenotrophomonas sp. SKA14]
Length = 815
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 338/774 (43%), Positives = 472/774 (60%), Gaps = 66/774 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V++EGL R V T+ R SL +E++
Sbjct: 72 GTLAQVLQL---LKLPDG--TIKVLVEGLSRVQV-------THVDERNGSLHGQAVEIDA 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFVASF 163
++ +R+ +A A L+S+ EQ KT + LL+T+ +LAD A
Sbjct: 120 TDERE-----AREVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPARLADTIAAHI 174
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ ++ +L+++ + RL LVD + ++ ++I +V+ Q+ KSQ+E+ L +Q
Sbjct: 175 SVRLADKQRLLETLAVSDRLEMLVGLVDGEIDVQQMEKRIRGRVKSQMEKSQREYYLNEQ 234
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P R
Sbjct: 235 MKAIQKELGDLDDAPGELEELARKIAEAGMPKAVEAKARNELNKLKQMSPMSAEAAVVRN 294
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YLE + +PW+K S+ + DLKAA++ LD+DHYGL +VK+RI+EYLAV+ +GP+L
Sbjct: 295 YLEWLLGVPWKKRSK-VRKDLKAAQDTLDADHYGLEKVKERILEYLAVQSRVKQMKGPIL 353
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++ L +
Sbjct: 354 CLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQNLNK 413
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V+FVAT+
Sbjct: 414 VGSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEVMFVATS 473
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E L+I ++ +
Sbjct: 474 NSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIKANGLQPEELEIGSDAIQDI 532
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
++ YTRE+GVRNLER +A + R +
Sbjct: 533 VRYYTRESGVRNLEREIAKICR-------------------------------------K 555
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
V E+ G + + + + V L+K LG RFD A E G+ GL
Sbjct: 556 VVKEIALTGPQPVKAKKAAKKKALVSVSSKNLDKYLGVRRFDFGRAEEENEI-GLVTGLA 614
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ +E+T + GKG+L LTGQLG+V+KESA AL+ VR+RA + + +
Sbjct: 615 WTEVGGDLLQIESTLVPGKGQLILTGQLGNVMKESASAALSVVRSRAVGFGIDS----DF 670
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
LQ D+H+H P GA PKDGPSAG +VT+LVS+ ++ VRAD AMTGE+TLRG V +GG
Sbjct: 671 LQKHDVHLHVPDGATPKDGPSAGAAMVTSLVSMLTKVPVRADVAMTGEITLRGRVTAIGG 730
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAA R GI+ VI+PE N KDL ++PA V L+I+ K +E+VL+ A E
Sbjct: 731 LKEKLLAALRGGIRTVIIPEENRKDLADIPANVTRDLKIVPVKYIEEVLDLALE 784
>gi|302342336|ref|YP_003806865.1| ATP-dependent protease La [Desulfarculus baarsii DSM 2075]
gi|301638949|gb|ADK84271.1| ATP-dependent protease La [Desulfarculus baarsii DSM 2075]
Length = 816
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 325/766 (42%), Positives = 463/766 (60%), Gaps = 69/766 (9%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFI 116
+ R ++ P GR+ +V +GL R V Y I +L K + EQ P+
Sbjct: 94 IMRQLKMPDGRIKILV--QGLTRARVSSWERHAPYLEVGIEALAEEK--EREGEQSPEVE 149
Query: 117 ALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI-HKLADIFVASFEISFEEQLVMLD 175
AL R + + +++S+ + +L +V +LAD+ ++ + ++ +L+
Sbjct: 150 ALIRNVREASEKILSL---RGLLSSDVVAILNSVETPGRLADMVASNLRLRIDKAQEILE 206
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+D RL+ + + ++ + +I + + ++SK+Q+E+ LR+Q+RAI+ ELGD +
Sbjct: 207 EMDPAGRLALVHGHLGKEVEVSTIQAQIQSEAQEEISKTQREYYLREQIRAIRRELGDGE 266
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D +L L + + MP ++ + K+L RL+ MQP+ T R YL+ + +LPW+K
Sbjct: 267 DRAAELFELRQTILDMRMPQDVREESLKQLSRLENMQPESAEATVIRTYLDWVVELPWQK 326
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
++ + LD+ AK LD DHY L +VK RI+E L+VRKL P +GP++CF+GPPGVGKTS
Sbjct: 327 STRD-KLDIAKAKAILDEDHYDLAKVKDRILEQLSVRKLNPRGKGPIICFIGPPGVGKTS 385
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A+GRKF+R+SLGGV+DEA+IRGHRRTYIG+MPGR++ GLK+ G NPV ++DE
Sbjct: 386 LGRSIARAMGRKFVRLSLGGVRDEAEIRGHRRTYIGAMPGRILQGLKQAGSNNPVFMIDE 445
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
+DK GSD RGDP SALLEVLDPEQN F+DHYLN+PFDLSKV+F+ TAN IP PLLD
Sbjct: 446 VDKVGSDYRGDPTSALLEVLDPEQNNAFSDHYLNLPFDLSKVMFITTANVEDTIPEPLLD 505
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVIELPGYT +EK++IA +HLI R L + GL ++I + + +I+ YTREAG+R+
Sbjct: 506 RMEVIELPGYTDDEKVQIARKHLIDRQLKETGLWRRKVRISDGAILEIIRNYTREAGLRS 565
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L A+ R A +VAE +
Sbjct: 566 LERELGAILRKIARQVAEGK---------------------------------------- 585
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRF---DDREAAERVAAPGISVGLVWTNFGGEVQ 652
L V+ A ++K LG ++ DDR E G++ GL WT+ GGEV
Sbjct: 586 ---------AGALSVNAAAVQKYLGVRKYLPEDDRGEGE----VGVATGLAWTSAGGEVL 632
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
VE + GKG L TG LG+V+ ESAQ AL++VR RA L + + DIH+H
Sbjct: 633 RVEVAILDGKGNLTSTGSLGEVMSESAQAALSYVRGRAGAFGL----KKDFYEHLDIHLH 688
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
P+GA+PKDGPSAGVT+ TA+VS + VR D AMTGE+TL G VLP+GG+K+K LAA
Sbjct: 689 VPSGAIPKDGPSAGVTICTAMVSALTGVPVREDVAMTGEITLTGKVLPIGGLKEKTLAAL 748
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
R G+K VI+P +N K+L E+P V L+++ + M+ +LE A G
Sbjct: 749 RMGLKTVIVPAKNHKELAEIPLKVSRGLKLVQVEHMDQILELALAG 794
>gi|219849757|ref|YP_002464190.1| ATP-dependent protease La [Chloroflexus aggregans DSM 9485]
gi|219544016|gb|ACL25754.1| ATP-dependent protease La [Chloroflexus aggregans DSM 9485]
Length = 812
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 329/759 (43%), Positives = 463/759 (61%), Gaps = 79/759 (10%)
Query: 72 VVLEGLCRFSVQELSTRGTY----YTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAM 127
VV+ GL R + E + + +T R E T E+EQ+ +A A
Sbjct: 97 VVVRGLVRAELGEATQTAPFLRFTFTRRPDVFERTP-ELEQL-----------MVEAHAA 144
Query: 128 ELISVLEQKQKTGGRTKVLLETV--PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSK 185
+ +VLE + + + ++ P H LAD S + +F E+ +L++ D+ RL K
Sbjct: 145 -IDAVLELRPGVTQEIRNFVRSIDDPGH-LADNTGYSPDYTFAERQDLLETFDVVERLRK 202
Query: 186 ATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALE 245
+ + + V ++ Q+V+ +K Q+EF LRQQ++AI++ELG++ + +L L
Sbjct: 203 VCDFYRKQFALLEVQARLRQEVQESAAKQQREFYLRQQLKAIQKELGEDGGEAAELDDLR 262
Query: 246 RKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLK 305
+K+ +A +P K +EL RL ++ P Y R YLE +A+LPW K + + +D+
Sbjct: 263 QKLAAANLPDVARKEADRELNRLARINASSPEYQMVRTYLEWLAELPWNKYTGQ-PIDIA 321
Query: 306 AAKERLDSDHYGLVRVKQRIIEYLAVRKLKP--------DARGPVLCFVGPPGVGKTSLA 357
++ LD DH+GL +VK+RI+EYLAV++ + R P+L FVGPPGVGKTSL
Sbjct: 322 YTRQVLDEDHHGLQKVKERILEYLAVKQRRALLGEENLRANREPILAFVGPPGVGKTSLG 381
Query: 358 SSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEID 417
SIA ALGR F+R+SLGGV+DEA++RG RRTYIGS PGR+I L+R G +PV+LLDEID
Sbjct: 382 QSIARALGRSFVRMSLGGVRDEAELRGFRRTYIGSQPGRIIQELRRAGTADPVILLDEID 441
Query: 418 KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRM 477
K G D RGDPA+ALLEVLDPEQN TF DHYLN+PFDLS+V+F+ATAN +PP L DRM
Sbjct: 442 KLGIDYRGDPAAALLEVLDPEQNHTFTDHYLNLPFDLSRVLFLATANTWDTVPPALRDRM 501
Query: 478 EVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLE 537
EVIEL GY +EK++IA+ HL+PR L +GL + + E ++ +I YTREAGVRNLE
Sbjct: 502 EVIELSGYIEDEKVQIALSHLVPRQLRANGLRPDEATVSEEALRCIINEYTREAGVRNLE 561
Query: 538 RNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHE 597
R++ A+ R A +++E E + A
Sbjct: 562 RSIGAVLRKVARRLSEGEIDPA-------------------------------------- 583
Query: 598 VSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEAT 657
P VVD A + LG PRF + E ER+ PG+++GLVWT GG++ FVEA+
Sbjct: 584 -------NLPFVVDAAFVRTALGRPRFTN-ETRERIDQPGVAIGLVWTPVGGDIIFVEAS 635
Query: 658 AMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGA 717
A+ GK EL +TGQLGDV++ESA+ ALT+VR+RA L + + + IHIH PAGA
Sbjct: 636 AVEGKKELIITGQLGDVMRESAEAALTYVRSRARSLGIEP----SFFENHAIHIHVPAGA 691
Query: 718 VPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIK 777
VPKDGPSAG+T+ TAL S + + VR D AMTGE++LRG VLP+GG+K+K L AHR GI+
Sbjct: 692 VPKDGPSAGITIATALASAATGRLVRDDLAMTGEISLRGRVLPIGGIKEKALGAHRAGIR 751
Query: 778 RVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+ILP+RN+ DL ++P V + I + +++VL A
Sbjct: 752 TIILPKRNIHDLDDLPPKVSTEMTFIPVETLDEVLNIAL 790
>gi|374850827|dbj|BAL53806.1| ATP-dependent Lon protease, partial [uncultured planctomycete]
Length = 594
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 307/629 (48%), Positives = 404/629 (64%), Gaps = 55/629 (8%)
Query: 188 ELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERK 247
+ + LQ + KI Q+ + +L+K Q+E++LRQQ+RAI+EELG+ ++ ++ L ++
Sbjct: 8 QYLHHELQVQELRHKIQQQAQSELTKQQREYMLRQQLRAIQEELGEKSPEKAEMDELRQR 67
Query: 248 MQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAA 307
+ A +P + K ++EL RL+++ P P Y R +LEL+ +LPW K + + LD+ A
Sbjct: 68 LAEADLPDEVRKEAERELNRLERLPPIAPDYQVIRTWLELVLELPWRKETPD-QLDIARA 126
Query: 308 KERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRK 367
++ LD DHYGL +K+RI+E+LAV KL P A+ P+LCFVGPPGVGKTSL SIA ALGRK
Sbjct: 127 RQVLDEDHYGLEEIKERILEHLAVLKLNPQAKAPILCFVGPPGVGKTSLGQSIARALGRK 186
Query: 368 FIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDP 427
F R SLGG+ DEA++RGHRRTYIG+MPGR+I ++R GV NPV++LDE+DK G D RGDP
Sbjct: 187 FERQSLGGLHDEAELRGHRRTYIGAMPGRIIQAIRRAGVKNPVLMLDEVDKIGRDFRGDP 246
Query: 428 ASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTP 487
A+ALLE+LDP QN F D+YL++PFDLSKV F+ TAN IP PLLDRMEV+ L GYT
Sbjct: 247 AAALLEILDPAQNTNFRDNYLDLPFDLSKVFFITTANNLMTIPQPLLDRMEVLRLAGYTL 306
Query: 488 EEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAA 547
EEK+ IA R+LIPR L + GL L IP A +++VI RYTREAGVR LER L+ LAR
Sbjct: 307 EEKMEIAQRYLIPRQLKEAGLAPGQLVIPPATLQIVISRYTREAGVRELERTLSRLARKV 366
Query: 548 AVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSP 607
AV+ AE + T P
Sbjct: 367 AVRFAEGQ-------------------------------------------------TDP 377
Query: 608 LVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHL 667
+ V L +LGP RF +A E + PG++ GL WT GGEV ++EA + L L
Sbjct: 378 VTVQPQDLPDLLGPERFFPEQAREEL-PPGVATGLAWTETGGEVLYIEAVLLPQAEGLRL 436
Query: 668 TGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGV 727
TGQLG V+KESAQ AL++V + A L + + + IHIH PAGAVPKDGPSAGV
Sbjct: 437 TGQLGRVMKESAQAALSYVWSHAEMLGISPKK----FRRHGIHIHVPAGAVPKDGPSAGV 492
Query: 728 TLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLK 787
+VTAL SL + R DTAMTGE+TL GLVLPVGG+K+K+LAA R GI+RVILP N K
Sbjct: 493 AMVTALASLLTGLPARKDTAMTGEITLTGLVLPVGGIKEKVLAARRAGIRRVILPRENQK 552
Query: 788 DLVEVPAAVLASLEIILAKRMEDVLEQAF 816
DL E+P + +E + ++ +VL A
Sbjct: 553 DLREIPEPLRREIEFLFVSQLHEVLRAAI 581
>gi|224370123|ref|YP_002604287.1| protein Lon4 [Desulfobacterium autotrophicum HRM2]
gi|223692840|gb|ACN16123.1| Lon4 [Desulfobacterium autotrophicum HRM2]
Length = 807
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 313/755 (41%), Positives = 466/755 (61%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P GR+ +V +G+ + ++ + + I+ ++ +E+E+V + + AL R +
Sbjct: 99 PDGRIKALV--QGITKAQIKRFIKKKASFEVEIALVK--DLELEEVTIETE--ALMRNVR 152
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPI-HKLADIFVASFEISFEEQLVMLDSVDLKVR 182
++ +++++ + + G ++LE + KLAD+ A+ + E+ ++L++ D R
Sbjct: 153 ESSEKILAL---RGELSGDVGLILEHIESPGKLADLVAANLRLKVEDAQILLETSDTVKR 209
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L+K +L+ R L+ V +I V+ ++SKSQ+++ LR+Q++AI ELG+ +D ++
Sbjct: 210 LTKVNDLLARELELSTVQARIQTDVKDEISKSQRDYFLREQVKAIHRELGEGEDRFAEVE 269
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
+ K++ A +P + + K+LRRL++M + R YL+ I +LPW +++++ L
Sbjct: 270 DYKVKLKKAKLPPDSLEEAFKQLRRLEQMHSDSSEASIIRTYLDCIVELPWNRSTKDF-L 328
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
D++ + + LD +HYGL +VK RI+EYL+VRKL P +G ++CF GPPGVGKTSL +IA
Sbjct: 329 DIEKSAQLLDKNHYGLDKVKDRILEYLSVRKLNPGLKGQIICFAGPPGVGKTSLGQAIAK 388
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
A+ RKFIRISLGG++DEA+IRGHRRTYIG+MPGR++ GL++ V NPV +LDEIDK G+D
Sbjct: 389 AMKRKFIRISLGGIRDEAEIRGHRRTYIGAMPGRILQGLRQCKVNNPVFMLDEIDKLGND 448
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
RGDP+SALLE LDPEQN F+DHYLN+PFDLSKV+F+ TAN IP LLDRMEVI +
Sbjct: 449 FRGDPSSALLEALDPEQNTEFSDHYLNMPFDLSKVLFILTANMTDTIPSALLDRMEVIRI 508
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
PGYT EEK IA HL PR L ++GLG + I + VI YT EAG+R LER L A
Sbjct: 509 PGYTREEKQTIATTHLFPRQLKENGLGRRHITISSGALAAVISEYTLEAGLRELERKLGA 568
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
+ R A K+AE ++ + + + S T
Sbjct: 569 ICRKIARKIAEGQKGKY----------------------------------AIKKQSLTT 594
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
+ P VDE D+E ++ G+ GL WT GGE ++E GK
Sbjct: 595 FLGPPTYVDEL------------DQEESQ----VGLVTGLAWTEVGGEPLYIEVALCHGK 638
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
GEL +TGQ+GDV++ESA+ ALT+ +A + E + +DIHIH PAGA+PKDG
Sbjct: 639 GELSVTGQIGDVMQESARAALTFTKANMERFGIKKE----AFEEKDIHIHVPAGAIPKDG 694
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAG+ + TAL+S F+ + VR AMTGE++LRG VLP+GG+K+K L A R GIK++I+P
Sbjct: 695 PSAGIAMATALISAFTGRVVRNQVAMTGEISLRGRVLPIGGLKEKALGALRVGIKKIIIP 754
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
E+N KDL ++P +V +E K ++ VL+ AFE
Sbjct: 755 EKNRKDLFDMPKSVKKKIEFFCVKELDQVLDIAFE 789
>gi|39936024|ref|NP_948300.1| ATP-dependent protease La [Rhodopseudomonas palustris CGA009]
gi|39649878|emb|CAE28400.1| ATP-dependent protease Lon [Rhodopseudomonas palustris CGA009]
Length = 810
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 337/810 (41%), Positives = 472/810 (58%), Gaps = 89/810 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + I+ G A L L ++ P G V V++EGL R V + + R
Sbjct: 61 TQKNASDDDPAPDAIY--EIGTLASVLQL---LKLPDGTVK--VLVEGLARAKVDKYTDR 113
Query: 89 GTYYTARISSLE---MTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRT 143
YY A +LE T +E E + + DF + + K + E++ V++
Sbjct: 114 ADYYEADAVALEDSDATSVEAEALGRSVVSDFESYVKLNKKISAEVVGVVQS-------- 165
Query: 144 KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
KLAD + + ++ +L+++ + RL K L++ + ++V ++I
Sbjct: 166 -----ITDFAKLADTVASHLAVKIADRQGILETLSVTQRLEKVLGLMESEISVLQVEKRI 220
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
+V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D+L LE K+ + + Q
Sbjct: 221 RSRVKRQMEKTQREYYLNEQMKAIQKELGD-EDGRDELAELEEKIAKTKLSKEAREKAQH 279
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL++L++M P T R YL+ + +PW K S+ + DL+AA+ LDSDHYGL +VK+
Sbjct: 280 ELKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLEAAQAVLDSDHYGLEKVKE 338
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
RI+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IR
Sbjct: 339 RIVEYLAVQSRANKLSGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIR 398
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TF
Sbjct: 399 GHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTF 458
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
NDHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP L
Sbjct: 459 NDHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTETEKVEIARKHLIPLAL 517
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+HGL + I + + LVI+RYTREAGVRNLER ++ LAR ++ L
Sbjct: 518 TKHGLEPKEWSIDDNALLLVIRRYTREAGVRNLEREISTLARKVV-------KDLMLSKK 570
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP- 622
K VH +DE +E+ LG P
Sbjct: 571 KSVH------------------------------------------IDEKQIEEYLGVPK 588
Query: 623 -RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
RF + E ++V G+ GL WT+ GGE+ +E+ M GKG + +TG L DV+KES Q
Sbjct: 589 FRFGEIEKDDQV---GVVTGLAWTDVGGELLTIESVMMPGKGRMTVTGNLRDVMKESIQA 645
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA + + RDIH+H P GA PKDGPSAGV + T +VS+ +
Sbjct: 646 AASYVRSRAITFGIEPP----FFEKRDIHVHVPEGATPKDGPSAGVAMATTIVSVLTGIP 701
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
+R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ L
Sbjct: 702 IRRDIAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGLN 761
Query: 802 IILAKRMEDVLEQAF-EGGCP--WRQHSKL 828
II RM++V+ A P W + +KL
Sbjct: 762 IIPVARMDEVIANALTRAPVPIVWEEETKL 791
>gi|27381285|ref|NP_772814.1| ATP-dependent protease LA [Bradyrhizobium japonicum USDA 110]
gi|27354452|dbj|BAC51439.1| ATP-dependent protease LA [Bradyrhizobium japonicum USDA 110]
Length = 796
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 319/764 (41%), Positives = 466/764 (60%), Gaps = 69/764 (9%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ R + P G T+ +V +G+ R + + + ARI + E P+
Sbjct: 90 NIVRYITAPDG--THHIVCQGVQRARILDFLPGTPFPAARIQQIP------EPTTTSPEI 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
A + + A+E I +L Q + T LAD+ + +I +++ +L+
Sbjct: 142 EARALNLQRQAIEAIELLPQAPPE--LVAMFQSTTAPGALADLATSFMDIKPQDKQEVLE 199
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
++DL +R+ K ++ + L+ +R++ +I QK + Q+E +LR+QM I+ +LG+ D
Sbjct: 200 TIDLSLRVEKVSKHLAERLEVLRISNEIGQKTRASFDERQREAILREQMATIQRQLGEGD 259
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELIADLPWE 294
++ L + A MP H +KELRR ++M P+ G R YL+ + +LPW
Sbjct: 260 GKAAEVAELNAAIAQAKMPPEAEAHAKKELRRYERM-PEAAGEAGMVRTYLDWLIELPWA 318
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKT 354
+E+ +D+K A+ LD+DH+GL ++K RIIEYLAVRKL P + P+LCFVGPPGVGKT
Sbjct: 319 LPAEK-PIDIKEARRILDADHFGLEKIKSRIIEYLAVRKLAPQGKAPILCFVGPPGVGKT 377
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
SL SIA A+ R F+R+SLGGV DEA+IRGHRRTYIG++PG +I G+K+ G N VM+LD
Sbjct: 378 SLGQSIARAMDRPFVRVSLGGVHDEAEIRGHRRTYIGALPGNIIQGIKKAGSRNCVMMLD 437
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
EIDK G V+GDP++A+LEVLDPEQN TF D+YL VPFDLS+V+F+ATAN IP PLL
Sbjct: 438 EIDKMGRGVQGDPSAAMLEVLDPEQNGTFRDNYLGVPFDLSRVVFIATANMLDQIPGPLL 497
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRME+I L GYT +EKL IA R+L+ R L+ +GL +E +I +KL+++ YTREAGVR
Sbjct: 498 DRMELISLAGYTEDEKLEIAKRYLVRRQLEANGLTAEQAEIEPDALKLIVKGYTREAGVR 557
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGE 593
NLER + + R AAV+VAE + + + KD+ LG P + +A
Sbjct: 558 NLEREIGKVFRHAAVQVAEGSAAKVVVTVKDIATVLGQPRFEGEIA-------------- 603
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
+R + PG++ GL WT GG++ F
Sbjct: 604 -------------------------------------QRTSIPGVATGLAWTPVGGDILF 626
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+EA+ + G+G + LTGQLGDV++ES Q A+T V++RA+ L + + L + DIH+H
Sbjct: 627 IEASRVPGRGGMILTGQLGDVMRESVQAAMTLVKSRASQLGIDPQ----LFEKSDIHVHV 682
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
PAGA PKDGPSAGV + TAL SL + + VR+DTAMTGE++LRGLVLPVGG+K+K++AA
Sbjct: 683 PAGATPKDGPSAGVAMYTALTSLLTNRTVRSDTAMTGEISLRGLVLPVGGIKEKVVAAAA 742
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
G+KRV+LP RN +D ++P + +LE I +R+++ + A E
Sbjct: 743 AGLKRVMLPARNKRDYDDIPKSARDNLEFIWLERVDEAIAAALE 786
>gi|209885042|ref|YP_002288899.1| ATP-dependent protease La [Oligotropha carboxidovorans OM5]
gi|337741327|ref|YP_004633055.1| ATP-dependent protease La [Oligotropha carboxidovorans OM5]
gi|386030343|ref|YP_005951118.1| ATP-dependent protease La [Oligotropha carboxidovorans OM4]
gi|209873238|gb|ACI93034.1| ATP-dependent protease La [Oligotropha carboxidovorans OM5]
gi|336095411|gb|AEI03237.1| ATP-dependent protease La [Oligotropha carboxidovorans OM4]
gi|336098991|gb|AEI06814.1| ATP-dependent protease La [Oligotropha carboxidovorans OM5]
Length = 807
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 326/760 (42%), Positives = 456/760 (60%), Gaps = 81/760 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQ-----DPDFIAL 118
P G V V++EGL R V + S R YY A +L T E + E DF +
Sbjct: 92 PDGTVK--VLVEGLERARVTKYSDRTDYYEAEAVALADTGAESVEAEALGRSVVSDFESY 149
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
+ K + E++ V++Q KLAD + + ++ +L+++
Sbjct: 150 VKLNKKISAEVVGVVQQ-------------ITDYAKLADTVASHLAVKIADRQDILETLS 196
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL K L++ + ++V +KI +V+ Q+ K+Q+E+ L +QM+AI++ELGD D+
Sbjct: 197 VSQRLEKVLGLMESEISVLQVEKKIRSRVKRQMEKTQREYYLNEQMKAIQKELGD-DEGR 255
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
D+L LE K+ + + Q EL++L++M P T R YL+ + +PW K S+
Sbjct: 256 DELADLEEKIAKTKLSKEAREKAQHELKKLRQMSPMSAEATVVRNYLDWLLSIPWGKKSK 315
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ DL AA++ LD+DHYGL +VK RI+EYLAV+ GP+LC VGPPGVGKTSL
Sbjct: 316 -VKKDLAAAQDILDADHYGLEKVKDRIVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGK 374
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A GR+F+R+SLGGV+DEA+IRGHRRTYIGSMPG++I +++ NP+ LLDEIDK
Sbjct: 375 SIAKATGREFVRVSLGGVRDEAEIRGHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDK 434
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
G+D RGDP+SALLEVLDPEQN TFNDHYL V +DLS V+F+ TAN IP PL+DRME
Sbjct: 435 MGADFRGDPSSALLEVLDPEQNGTFNDHYLEVDYDLSNVMFITTANTLN-IPGPLMDRME 493
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
+I + GYT EK+ IA +HLIP + +HGL S+ I + + LVI+RYTREAGVRNLER
Sbjct: 494 IIRIAGYTENEKIEIARKHLIPAAVSKHGLSSKEFSIDDEALLLVIRRYTREAGVRNLER 553
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
L+ LAR A ++
Sbjct: 554 ELSTLARKAVKEL----------------------------------------------- 566
Query: 599 SNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
T + + V EA++E++LG P R+ + E+ ++V G+ GL WT+ GGE+ +E+
Sbjct: 567 --TISKKTSVKVTEAVVEEMLGVPKFRYGEIESDDQV---GVVTGLAWTDVGGELLTIES 621
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
M GKG + +TG L DV+KES A ++VR+RA + + L + RDIH+H P G
Sbjct: 622 VMMPGKGRMTVTGNLRDVMKESISAAASYVRSRAINYGIEPP----LFERRDIHVHVPEG 677
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAGV + T +VS+ + +R D AMTGE+TLRG VLP+GG+K+K+LAA R GI
Sbjct: 678 ATPKDGPSAGVAMATTIVSVLTGIPIRHDVAMTGEITLRGRVLPIGGLKEKLLAAARGGI 737
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K V +PE N KDL E+ A+ LEII RM++VL +A
Sbjct: 738 KTVFIPEDNAKDLTEISDAIKGGLEIIPVSRMDEVLSKAL 777
>gi|219670374|ref|YP_002460809.1| ATP-dependent protease La [Desulfitobacterium hafniense DCB-2]
gi|423076882|ref|ZP_17065590.1| endopeptidase La [Desulfitobacterium hafniense DP7]
gi|219540634|gb|ACL22373.1| ATP-dependent protease La [Desulfitobacterium hafniense DCB-2]
gi|361851834|gb|EHL04122.1| endopeptidase La [Desulfitobacterium hafniense DP7]
Length = 804
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 304/663 (45%), Positives = 428/663 (64%), Gaps = 55/663 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LADI + + ++ +L+S+++ RL + TE++ R + + + +I +V Q+ K
Sbjct: 161 RLADIVASHLNLKLGDKQAILESLEVAQRLERLTEIIMRENEILELERRIGLRVRKQMEK 220
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+ LR+QM+AI++ELGD D+ + ++ K+ A +P + + KE+ RL+KM
Sbjct: 221 TQKEYYLREQMKAIQKELGDKDEKQAEVEEYREKVAQAKLPEEVAERALKEIDRLEKMPQ 280
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R YL+ I LPW S++ D+K A++ L+ DHYGL ++K+RI+E+LA+RK
Sbjct: 281 ASSEGTVVRTYLDWILALPWTTMSKD-KTDIKRAEKILNDDHYGLEKIKERILEFLAIRK 339
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L P + P++CFVGPPGVGKTSLA S+A AL RKF+R+SLGGV+DEA+IRGHRRTYIG++
Sbjct: 340 LTPKMKSPIICFVGPPGVGKTSLAKSVARALDRKFVRMSLGGVRDEAEIRGHRRTYIGAL 399
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I G++ G NPV LLDEIDK SD RGDPA+ALLEVLDPEQN +F+DHYL++P+D
Sbjct: 400 PGRIIQGMRTAGTANPVFLLDEIDKMASDFRGDPAAALLEVLDPEQNFSFSDHYLDLPYD 459
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS +F+ TAN IP PLLDRMEVI L GYT +EK+ IA R+L+P+ + HGL + L
Sbjct: 460 LSHTLFIMTANSLYSIPRPLLDRMEVISLSGYTEDEKVNIAKRYLVPKQMKAHGLKASQL 519
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+I + ++ ++Q YTRE+GVRNLER +A L R A +V ++E + A
Sbjct: 520 EIGDKVILKLVQGYTRESGVRNLERQIANLCRKVATRVVKKEWKTA-------------- 565
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
E+ P MLE+ LG PR+ E A
Sbjct: 566 -------------ELRP----------------------EMLEEFLGSPRY-QFEKARIK 589
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G + GL +T GG+V +E + GKG+L LTG+LGDV+KESA T+VR+ + +L
Sbjct: 590 PEIGAATGLAYTEVGGDVLTIEVIPLPGKGQLTLTGKLGDVMKESAYAGRTFVRSHSREL 649
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ + + D+HIH P GA+PKDGPSAG+T+ TA+ S +++ V +D AMTGE+T
Sbjct: 650 GIPD----DFYEKTDLHIHVPEGAIPKDGPSAGITMATAMASALAKRAVPSDLAMTGEIT 705
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GGVK+K+LAAHR GIK+VILPE+N KDL EVP V LE RME+V++
Sbjct: 706 LRGNVLPIGGVKEKVLAAHRAGIKQVILPEQNRKDLEEVPENVRKELEFHFVSRMEEVIK 765
Query: 814 QAF 816
A
Sbjct: 766 IAL 768
>gi|415884182|ref|ZP_11546211.1| ATP-dependent protease La [Bacillus methanolicus MGA3]
gi|387591977|gb|EIJ84294.1| ATP-dependent protease La [Bacillus methanolicus MGA3]
Length = 775
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/796 (39%), Positives = 469/796 (58%), Gaps = 93/796 (11%)
Query: 35 DGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTA 94
D +++V H + L L G T V++EGL R + +Y
Sbjct: 59 DDPTEEDVYHMGTLTKVKQMLKLPNG--------TIRVLVEGLKRAEIISFFDEDDHYEV 110
Query: 95 RISSLE-----------MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT 143
+ + E + + +E EQ +I +S++ A ++ +E+ GR
Sbjct: 111 SLRTYEDRETKDAEDQALMRTMLEYFEQ---YIKMSKKISAETYSSVADIEEP----GR- 162
Query: 144 KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
+AD+ + + +E+ +L++VD+K R+++ E++ + + + +KI
Sbjct: 163 -----------MADVISSHLPLKLKEKQEILETVDIKERMNRIIEILHNEKEVLNLEKKI 211
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
Q+V+ + ++QKE+ LR+QM+AI++ELG+ + ++ L K++ AGMP ++ K
Sbjct: 212 GQRVKRSMERTQKEYYLREQMKAIQKELGEKEGKSGEIAELTEKIEQAGMPEHVKATAFK 271
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL R +K+ R Y+E + LPW K +++ DLD+ A+ L+ DHYGL +VK+
Sbjct: 272 ELDRYEKVPSSSAESAVIRNYIEWLISLPWTKKTDD-DLDIHKAERILNKDHYGLEKVKE 330
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
R++EYLAV++L +GP+LC GPPGVGKTSLA SIA++L RKF+RISLGGV+DE++IR
Sbjct: 331 RVLEYLAVQQLTRSLKGPILCLAGPPGVGKTSLARSIATSLNRKFVRISLGGVRDESEIR 390
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTY+G+MPGR+I G+++ G NPV LLDEIDK SD RGDP++A LEVLDPEQN F
Sbjct: 391 GHRRTYVGAMPGRIIQGMRKAGTINPVFLLDEIDKMSSDFRGDPSAAKLEVLDPEQNHNF 450
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
+DHY+ P+DLSKV+F+ATAN IP PL DRME+I + GYT EK+ IA HL+P+ +
Sbjct: 451 SDHYIEEPYDLSKVMFIATANDLSTIPGPLRDRMEIITIAGYTELEKIHIAKDHLLPKQI 510
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+HGL LQ+ E ++ +++ YTREAGVR LER LA + R A + E+++ + S
Sbjct: 511 KEHGLTKAQLQVREDAIQKIVRYYTREAGVRGLERQLATICRKTAKIIVSGEKKRVVVSE 570
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPR 623
K+V LG P+
Sbjct: 571 KNVEEF-------------------------------------------------LGKPK 581
Query: 624 FDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIAL 683
F + AE G++ GL +T FGG+ +E + GKG+L LTG+LGDV+KESAQ A
Sbjct: 582 FRYGQ-AEMEDQVGVATGLAYTTFGGDTLQIEVSLSPGKGKLVLTGKLGDVMKESAQAAF 640
Query: 684 TWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVR 743
++VR++A +L + N + DIHIH P GAVPKDGPSAG+T+ TALVS S K +
Sbjct: 641 SYVRSKAKELGI----DENFHEKYDIHIHVPEGAVPKDGPSAGITIATALVSALSGKPIS 696
Query: 744 ADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEII 803
+ MTGE+TLRG VLP+GGVK+K L+AHR GI ++ILP+ N KD+ E+P +V L+ +
Sbjct: 697 KEVGMTGEITLRGRVLPIGGVKEKTLSAHRAGITKIILPKENEKDIDEIPDSVRDELDFV 756
Query: 804 LAKRMEDVLEQAFEGG 819
L +++VL+ A GG
Sbjct: 757 LVSHVDEVLKHALGGG 772
>gi|317492907|ref|ZP_07951331.1| ATP-dependent protease [Enterobacteriaceae bacterium 9_2_54FAA]
gi|365835461|ref|ZP_09376880.1| endopeptidase La [Hafnia alvei ATCC 51873]
gi|316919029|gb|EFV40364.1| ATP-dependent protease [Enterobacteriaceae bacterium 9_2_54FAA]
gi|364566036|gb|EHM43740.1| endopeptidase La [Hafnia alvei ATCC 51873]
Length = 784
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 333/760 (43%), Positives = 466/760 (61%), Gaps = 75/760 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EGL R + LS G ++ A+ LE+ EM++ EQ+ QF+
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLEIP--EMDEREQEVLVRTAINQFE 139
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
++ +K L ++ KLAD A + ++ +L+ D+ R
Sbjct: 140 G-------YIKLNKKIPPEVLTSLNSIDDAAKLADTIAAHMPLKLNDKQAVLEMSDVTER 192
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ DD D+
Sbjct: 193 LEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMDDTPDEFE 252
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW A ++
Sbjct: 253 ALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMIQVPW-NARSKVKK 311
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTSL SIA
Sbjct: 312 DLNKAQEILDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTSLGQSIAR 371
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDEIDK SD
Sbjct: 372 ATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSD 431
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLDRMEVI L
Sbjct: 432 MRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLDRMEVIRL 490
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GYT +EKL IA +HL+P+ L+++ L L + ++ + +I+ YTREAGVR+LER ++
Sbjct: 491 SGYTEDEKLNIAKQHLLPKQLERNALKKGELTVDDSAISGIIRYYTREAGVRSLEREISK 550
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
L R A + N L D + +E+ G++
Sbjct: 551 LCRKA--------------------------VKNLLMDKSVKHIEI--NGDN-------- 574
Query: 603 RITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
L+ LG R+D ++ RV G GL WT GG++ +E +
Sbjct: 575 ------------LKDFLGVQRYDYGRADSENRV---GQVTGLAWTEVGGDLLTIETACVP 619
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHFPAGAV 718
GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H P GA
Sbjct: 620 GKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHVHVPEGAT 673
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR GIK
Sbjct: 674 PKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHRGGIKT 733
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
V++P+ N +DL E+P VLA L+I KR+++VL A +
Sbjct: 734 VLIPDENKRDLEEIPDNVLADLDIHPVKRIDEVLALALQN 773
>gi|386717299|ref|YP_006183625.1| ATP-dependent protease La [Stenotrophomonas maltophilia D457]
gi|384076861|emb|CCH11446.1| ATP-dependent protease La [Stenotrophomonas maltophilia D457]
Length = 815
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 339/774 (43%), Positives = 470/774 (60%), Gaps = 66/774 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V++EGL R V T+ R SL +E++
Sbjct: 72 GTLAQVLQL---LKLPDG--TIKVLVEGLSRVQV-------THVDERNGSLHGQAVEIDA 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFVASF 163
++ +R+ +A A L+S+ EQ KT + LL+T+ +LAD A
Sbjct: 120 SDERE-----AREVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPARLADTIAAHI 174
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ ++ +L+++ + RL LVD + ++ ++I +V+ Q+ KSQ+E+ L +Q
Sbjct: 175 SVRLADKQRLLETLAVGDRLEMLVGLVDGEIDVQQMEKRIRGRVKSQMEKSQREYYLNEQ 234
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P R
Sbjct: 235 MKAIQKELGDLDDAPGELEELARKIAEAGMPKAVEAKARNELNKLKQMSPMSAEAAVVRN 294
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YLE + +PW+K S+ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +GP+L
Sbjct: 295 YLEWLLGVPWKKRSK-VRKDLKVAQDTLDADHYGLEKVKERILEYLAVQSRVKQMKGPIL 353
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++ L +
Sbjct: 354 CLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQNLNK 413
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V+FVAT+
Sbjct: 414 VGSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEVMFVATS 473
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E L+I ++ +
Sbjct: 474 NSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQVKANGLQPEELEIGSDAIQDI 532
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
++ YTRE+GVRNLER +A + R ++A L P
Sbjct: 533 VRYYTRESGVRNLEREIAKICRKVVKEIA----------------LAGPQ---------- 566
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
P+ + V L+K LG RFD A E G+ GL
Sbjct: 567 ------PVKAKKGAKKKAL-----VSVSSKNLDKYLGVRRFDFGRAEEENEI-GLVTGLA 614
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ +E+T + GKG+L LTGQLG+V+KESA AL+ VR+RA + + +
Sbjct: 615 WTEVGGDLLQIESTLVPGKGQLILTGQLGNVMKESASAALSVVRSRAVGFGIDS----DF 670
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
LQ D+H+H P GA PKDGPSAG +VT+LVS+ ++ VRAD AMTGE+TLRG V +GG
Sbjct: 671 LQKHDVHLHVPDGATPKDGPSAGAAMVTSLVSMLTKVPVRADVAMTGEITLRGRVTAIGG 730
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAA R GI+ VI+PE N KDL ++PA V LEI+ K +E+VL+ A E
Sbjct: 731 LKEKLLAALRGGIRTVIIPEENRKDLADIPANVTRDLEIVPVKYIEEVLDLALE 784
>gi|261405363|ref|YP_003241604.1| ATP-dependent protease La [Paenibacillus sp. Y412MC10]
gi|261281826|gb|ACX63797.1| ATP-dependent protease La [Paenibacillus sp. Y412MC10]
Length = 778
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 318/753 (42%), Positives = 459/753 (60%), Gaps = 65/753 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EG+ R V E + + YY L E+ DP+ AL R
Sbjct: 84 PNG--TIRVLVEGMERAEVIEYTDQEDYYEVIARELP------EEENHDPEVSALMRTVL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I++ K+ T + + +LAD+ + + +++ +L+++D++ RL
Sbjct: 136 SQFENYINL--SKKVTPETLAAVSDIDEPGRLADVITSHLSLKIKDKQEILETIDVRKRL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K ++++ + + + KI Q+V+ Q+ K+QKE+ LR+QM+AI++ELGD + ++
Sbjct: 194 EKLLDILNNEREVLELERKINQRVKKQMEKTQKEYYLREQMKAIQKELGDKEGRAGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L ++Q +P + + V+KE+ RL+KM R Y++ + LPW +E+ DLD
Sbjct: 254 LRSQLQELELPERVQEKVEKEIDRLEKMPASSAEGGVIRNYVDWLLALPWTNKTED-DLD 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
+ A++ LD DHYGL + K+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA +
Sbjct: 313 IVKAEQVLDEDHYGLEKPKERVLEYLAVQKLVKKMKGPILCLVGPPGVGKTSLARSIARS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L RKF+R+SLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV LLDEIDK SD
Sbjct: 373 LERKFVRVSLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGSMNPVFLLDEIDKMASDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP+SALLEVLDPEQN TF+DH++ +PFDLS V+FV TAN IP PLLDRMEV+ +P
Sbjct: 433 RGDPSSALLEVLDPEQNNTFSDHFVEIPFDLSNVMFVTTANVLHNIPRPLLDRMEVLNIP 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EKL+IA R+L+P+ +HGL E L + E + VI+ YTRE+GVRNLE+ +AAL
Sbjct: 493 GYTELEKLQIANRYLLPKQKSEHGLEPEQLILDEEALMKVIREYTRESGVRNLEQQVAAL 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA ++ Q+ E
Sbjct: 553 CRKAAKQIVTQQSES--------------------------------------------- 567
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+ + A ++ LG P+F AE G GL WT GGE +E T + G G
Sbjct: 568 ----IEIKAADIKDYLGIPKF-RYGMAELEDQVGTVTGLAWTEVGGETLTIEVTVVPGTG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A ++ R++A +L + + + D+HIH P GA+PKDGP
Sbjct: 623 KLTLTGKLGDVMKESAQAAFSFTRSKAVELGI----DPDFHEKLDVHIHIPEGAIPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S +++ V D AMTGE+TLRG VLP+GG+K+K LAAHR G K+++LP+
Sbjct: 679 SAGITIATALISSLTKRHVARDVAMTGEITLRGRVLPIGGLKEKSLAAHRAGYKKILLPK 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N +DL ++P +V +E + M+ VLE A
Sbjct: 739 DNERDLRDIPDSVKNDVEFVPVSHMDQVLEHAL 771
>gi|354598748|ref|ZP_09016765.1| anti-sigma H sporulation factor, LonB [Brenneria sp. EniD312]
gi|353676683|gb|EHD22716.1| anti-sigma H sporulation factor, LonB [Brenneria sp. EniD312]
Length = 788
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 333/763 (43%), Positives = 463/763 (60%), Gaps = 85/763 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLDSPAIDEREQEVLMRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ +E + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIEDAAR----------------LADTIAAHMPLKLTDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDITERLEYLMAMMESEIDLLQVEKRIRGRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIEAAKMPKEAREKTEAELQKLKMMSPMSAEATVVRSYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD+DHYGL RVK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLLKAQEMLDTDHYGLERVKERILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVRN
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKKSELSVEDSAIVGIIRYYTREAGVRN 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ + M +S
Sbjct: 544 LEREISKLCRKA--------------------------------------VKTLLMDKSV 565
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAE--RVAAPGISVGLVWTNFGGEVQF 653
+ RIT L+ LG RFD A E RV G GL WT GG++
Sbjct: 566 KHI----RITGD------NLKDFLGVQRFDYGRADEENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A
Sbjct: 729 GGIKTVLIPDDNKRDLEEIPQNVIADLDIHPVKRIEEVLALAL 771
>gi|398823690|ref|ZP_10582046.1| ATP-dependent protease La [Bradyrhizobium sp. YR681]
gi|398225663|gb|EJN11929.1| ATP-dependent protease La [Bradyrhizobium sp. YR681]
Length = 807
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 340/809 (42%), Positives = 477/809 (58%), Gaps = 89/809 (11%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q ASD + I+ G A L L ++ P G V V++EGL R VQ+ + R
Sbjct: 62 QKNASDDDPAPDAIY--ETGTLASVLQL---LKLPDGTVK--VLVEGLERARVQKYTDRS 114
Query: 90 TYYTARISSLEMT---KIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
YY A +L T +E E + + DF + + K + E++ V++
Sbjct: 115 EYYEATAIALADTDAKSVEAEALARSVVSDFESYVKLNKKISAEVVGVVQA--------- 165
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
KLAD + + ++ +L+++ + RL K L++ + ++V ++I
Sbjct: 166 ----ITDFAKLADTVASHLAVKIADRQGILETLSVTTRLEKVLGLMESEISVLQVEKRIR 221
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELGD DD D+L LE K+ + + Q E
Sbjct: 222 SRVKRQMEKTQREYYLNEQMKAIQKELGD-DDGRDELADLEEKIAKTKLSKEAREKAQHE 280
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L++L++M P T R YL+ + +PW K S+ + DL+AA+ LDSDHYGL +VK+R
Sbjct: 281 LKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLEAAQAILDSDHYGLEKVKER 339
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRG
Sbjct: 340 IVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRG 399
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TFN
Sbjct: 400 HRRTYIGSMPGKIIQSMRKAKSSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTFN 459
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ I+ +HLIP +
Sbjct: 460 DHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTENEKVEISRKHLIPNAVS 518
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+HGL S+ I + + L+I+RYTREAGVRNLER L+ LAR A +E + K
Sbjct: 519 KHGLDSKEFSIDDDALLLLIRRYTREAGVRNLERELSTLARKAV-------KELMISKKK 571
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP-- 622
V V E LE++LG P
Sbjct: 572 SVK------------------------------------------VTEKTLEELLGVPKY 589
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
RF + E+ +V GI GL WT+ GGE+ +E M GKG++ +TG L DV+KES A
Sbjct: 590 RFGEIESEPQV---GIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISAA 646
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA +V L RDIH+H P GA PKDGPSAGV + TA++S+ + V
Sbjct: 647 ASYVRSRA----IVYGIEPPLFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPV 702
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ +EI
Sbjct: 703 RHDVAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMEI 762
Query: 803 ILAKRMEDVLEQAF-EGGCP--WRQHSKL 828
I R++DV+ +A + P W + +K+
Sbjct: 763 IPVSRLDDVVAKALVKKPVPIVWEEDTKV 791
>gi|212638448|ref|YP_002314968.1| Class III heat-shock ATP-dependent Lon protease [Anoxybacillus
flavithermus WK1]
gi|212559928|gb|ACJ32983.1| Class III heat-shock ATP-dependent Lon protease [Anoxybacillus
flavithermus WK1]
Length = 774
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 315/756 (41%), Positives = 462/756 (61%), Gaps = 65/756 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T+ V++EG+ R V + + Y ++ +Q +D +F AL R
Sbjct: 82 PNG--TFRVLVEGISRGKVVKWVSEEPCYVVQVEPF------ADQENEDMEFEALRRTML 133
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I + K+ + +++ ++ADI + + EE+ +L++VD+K R+
Sbjct: 134 EYFEQYIKL--SKKLSADIYTSVMDIQQAGRMADIIASHLPLKLEEKQRLLEAVDVKERV 191
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
+ +++ + + + ++I+Q+V+ + ++QKE+ LR+QM+AI++ELG+ + ++
Sbjct: 192 HQIIQILHNEKEILHLEKRISQRVKQSMERTQKEYYLREQMKAIQKELGEKEGKAGEIEL 251
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ AGMP ++ KEL R +K+ R YL+ + LPW K +E+I D
Sbjct: 252 LREKIEQAGMPEHVKATALKELDRYEKVPAASAESGVIRNYLDWLLALPWTKQTEDIH-D 310
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
+ A++ L+ +HYGL VK+R++EYLAV++L RGP+LC VGPPGVGKTSLA SIA
Sbjct: 311 IHRAEKILNEEHYGLETVKERVLEYLAVQQLTNSLRGPILCLVGPPGVGKTSLARSIAKT 370
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+RISLGGV+DE++IRGHRRTY+G++PGR+I G+K+ G NPV LLDEIDK SD
Sbjct: 371 LNRHFVRISLGGVRDESEIRGHRRTYVGALPGRIIQGMKKAGTINPVFLLDEIDKMSSDF 430
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN +F+DHY+ P+DLSKV+F+ATAN IP PLLDRMEVI +P
Sbjct: 431 RGDPSAALLEVLDPEQNHSFSDHYIEEPYDLSKVMFIATANTLATIPRPLLDRMEVITIP 490
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
YT EKL IA HL+P+ ++ HGL L + + + VI+ YTREAGVRNLER LA++
Sbjct: 491 SYTEIEKLHIAKEHLLPKQMEAHGLQKRMLHMRDDAILQVIRYYTREAGVRNLERQLASI 550
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + + +++ + + K+V
Sbjct: 551 CRKAAKTIVSEGRKRIVVTEKNV------------------------------------- 573
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+ LG P++ + AE G++ GL +T GG+ +E + GKG
Sbjct: 574 ------------SEFLGKPKYHYGQ-AENEDQVGVATGLAYTTAGGDTLAIEVSIAPGKG 620
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTGQLGDV+KESAQ A T++R++A +L + E L DIHIH P GAVPKDGP
Sbjct: 621 KLTLTGQLGDVMKESAQAAFTYIRSKAKELGIDPEFHEKL----DIHIHVPEGAVPKDGP 676
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + K V MTGE+TLRG VL +GGVK+K+L+AHR G+K+VILP+
Sbjct: 677 SAGITMATALISALTGKPVSRFVGMTGEITLRGRVLAIGGVKEKVLSAHRAGLKKVILPK 736
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
N KDL ++P V L+ +L ++DVLE A GG
Sbjct: 737 ENEKDLEDIPEVVKKQLQFVLVSHIDDVLEHALVGG 772
>gi|448238932|ref|YP_007402990.1| ATP-dependent protease [Geobacillus sp. GHH01]
gi|445207774|gb|AGE23239.1| ATP-dependent protease [Geobacillus sp. GHH01]
Length = 775
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 322/786 (40%), Positives = 477/786 (60%), Gaps = 85/786 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G AR L ++ P+G T+ V++EG+ R + E+ + Y+ +
Sbjct: 68 YKMGTIARVKQL---LKLPNG--TFRVLVEGVARALITEVISEEPYFLVK---------- 112
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-----LLETVPIHKLADIFV 160
VE+ D A + +A ++ EQ R V +++ ++ADI
Sbjct: 113 ---VEKFADRAAKDLEDEALKRTMLEYFEQYINLSKRLSVDIYASIVDIDEPGRMADIIA 169
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ + EE+ +L+++D+K RL+K +++ + +++ +KI+ +V+ + ++QKE+ L
Sbjct: 170 SHLPLKLEEKQRILETIDVKERLNKIIQILHNEKEVLQLEKKISARVKQSMERTQKEYYL 229
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
R+QM+AI++ELG+ + ++ L+ K+++AGMP ++ + KEL R +K+
Sbjct: 230 REQMKAIQKELGEKEGKTGEVEELKEKIEAAGMPEHVKQTALKELDRYEKIPATSAESAV 289
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + LPW K +E+I D+K A+ L+ +HYGL +VK+R++E+L+V++L +G
Sbjct: 290 IRNYLDWLIALPWSKETEDIH-DIKRAEAILNEEHYGLDKVKERVLEFLSVKQLTKSLKG 348
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC GPPGVGKTSLA SIA ALGR+F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G
Sbjct: 349 PILCLAGPPGVGKTSLARSIAKALGRRFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQG 408
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+K+ G NPV LLDEIDK SD RGDP++A+LEVLDPEQN TF+DHY+ P+DLSKV+F+
Sbjct: 409 MKKAGTINPVFLLDEIDKMSSDFRGDPSAAMLEVLDPEQNHTFSDHYIEEPYDLSKVMFI 468
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
ATAN IP PLLDRMEVI +PGYT EKL IA RHL+P+ + +HGL LQI + +
Sbjct: 469 ATANHLSAIPQPLLDRMEVIHIPGYTEVEKLHIAKRHLLPKQITEHGLKKAALQIRDDAM 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR LER LAA+ R AA + E+++
Sbjct: 529 LDIIRHYTREAGVRELERQLAAICRKAARLIVSGEKKR---------------------- 566
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLG--PPRFDDREAAERVAAPGI 638
+V+ E LE+ LG R+ EA ++V G+
Sbjct: 567 ---------------------------VVITENNLEEFLGKRKYRYGRAEAEDQV---GV 596
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
+ GL +T FGG+ +E + G G+L LTG+LGDV+KESAQ A ++VR+RA +L +
Sbjct: 597 ATGLAYTAFGGDTLAIEVSLAPGNGKLVLTGKLGDVMKESAQAAFSYVRSRAEELDI--- 653
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ DIHIH P GAVPKDGPSAG+T+ TAL+S + K V MTGE+TLRG V
Sbjct: 654 -DPKFHEKYDIHIHVPEGAVPKDGPSAGITIATALISALTGKPVSRFVGMTGEITLRGRV 712
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
L +GG+K+K L+AHR G+K VILP+ N KDL ++P V L +L +++VL A G
Sbjct: 713 LAIGGLKEKTLSAHRAGLKTVILPKDNEKDLADIPETVKRDLRFVLVSHLDEVLPHALVG 772
Query: 819 GCPWRQ 824
W++
Sbjct: 773 ---WKR 775
>gi|192291679|ref|YP_001992284.1| ATP-dependent protease La [Rhodopseudomonas palustris TIE-1]
gi|192285428|gb|ACF01809.1| ATP-dependent protease La [Rhodopseudomonas palustris TIE-1]
Length = 810
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 337/810 (41%), Positives = 472/810 (58%), Gaps = 89/810 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + I+ G A L L ++ P G V V++EGL R V + + R
Sbjct: 61 TQKNASDDDPAPDAIY--EIGTLASVLQL---LKLPDGTVK--VLVEGLARAKVDKYTDR 113
Query: 89 GTYYTARISSLE---MTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRT 143
YY A +LE T +E E + + DF + + K + E++ V++
Sbjct: 114 ADYYEADAVALEDSDATSVEAEALGRSVVSDFESYVKLNKKISAEVVGVVQS-------- 165
Query: 144 KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
KLAD + + ++ +L+++ + RL K L++ + ++V ++I
Sbjct: 166 -----ITDFAKLADTVASHLAVKIADRQGILETLSVTQRLEKVLGLMESEISVLQVEKRI 220
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
+V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D+L LE K+ + + Q
Sbjct: 221 RSRVKRQMEKTQREYYLNEQMKAIQKELGD-EDGRDELAELEEKIAKTKLSKEAREKAQH 279
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL++L++M P T R YL+ + +PW K S+ + DL+AA+ LDSDHYGL +VK+
Sbjct: 280 ELKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLEAAQAVLDSDHYGLEKVKE 338
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
RI+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IR
Sbjct: 339 RIVEYLAVQSRANKLSGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIR 398
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TF
Sbjct: 399 GHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTF 458
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
NDHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP L
Sbjct: 459 NDHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTETEKVEIARKHLIPLAL 517
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+HGL + I + + LVI+RYTREAGVRNLER ++ LAR ++ L
Sbjct: 518 TKHGLEPKEWSIDDDALLLVIRRYTREAGVRNLEREISTLARKVV-------KDLMLSKK 570
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP- 622
K VH +DE +E+ LG P
Sbjct: 571 KSVH------------------------------------------IDEKQIEEYLGVPK 588
Query: 623 -RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
RF + E ++V G+ GL WT+ GGE+ +E+ M GKG + +TG L DV+KES Q
Sbjct: 589 FRFGEIEKDDQV---GVVTGLAWTDVGGELLTIESVMMPGKGRMTVTGNLRDVMKESIQA 645
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA + + RDIH+H P GA PKDGPSAGV + T +VS+ +
Sbjct: 646 AASYVRSRAITFGIEPP----FFEKRDIHVHVPEGATPKDGPSAGVAMATTIVSVLTGIP 701
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
+R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ L
Sbjct: 702 IRRDIAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGLN 761
Query: 802 IILAKRMEDVLEQAF-EGGCP--WRQHSKL 828
II RM++V+ A P W + +KL
Sbjct: 762 IIPVARMDEVIANALTRAPVPIVWEEETKL 791
>gi|89901777|ref|YP_524248.1| ATP-dependent protease La [Rhodoferax ferrireducens T118]
gi|89346514|gb|ABD70717.1| ATP-dependent protease La [Rhodoferax ferrireducens T118]
Length = 797
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 327/760 (43%), Positives = 460/760 (60%), Gaps = 65/760 (8%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R V P G T+ +V +G RF V + ARI +I +P+ A
Sbjct: 96 RYVTTPDG--THHIVCQGQQRFRVTGYLEGFAFTVARIE-----RIAEAAAPDNPEIEAR 148
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
+ K A+E++ +L Q ++T LAD+ +I E+ +L+ +D
Sbjct: 149 FMRLKERAVEVLQMLPQVPAEMVHAVQGIDTP--ATLADLVAGYVDIKATEKQEILEEID 206
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG-DNDDD 237
L+ RL + +++ + + ++ I ++ + L + ++EFLLR+Q+++I++ELG D +
Sbjct: 207 LRRRLDRVLDMLVHRIDVLNLSRDIDKRTKASLGQREREFLLREQLKSIQKELGEDASGN 266
Query: 238 EDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKAS 297
++ L ++ A MP + K KEL+RL++M Y+ R YL+ + ++PW KA
Sbjct: 267 AAEIEELRNLIEEAHMPEEVAKQAAKELKRLERMADGSAEYSMVRTYLDWLIEVPW-KAP 325
Query: 298 EEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLA 357
E +D+ A+ LD+DH+ L +VK+RI+E+LAVRKLKP GP+LC VGPPGVGKTSL
Sbjct: 326 EPDTIDVGQARRVLDADHFDLEKVKKRILEFLAVRKLKPSGHGPILCLVGPPGVGKTSLG 385
Query: 358 SSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEID 417
SIA ALGRKF+R+SLGGV DEA+IRGHRRTY+G++PG +I LK+ G VM+LDEID
Sbjct: 386 QSIARALGRKFVRVSLGGVHDEAEIRGHRRTYVGALPGNIIQALKKAGTRGCVMMLDEID 445
Query: 418 KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRM 477
K GS ++GDP++ALLEVLDPEQN +F D+YL VP+DLS+V+F+ TAN P+P PL DRM
Sbjct: 446 KLGSGIQGDPSAALLEVLDPEQNNSFRDNYLAVPYDLSQVLFITTANVLDPVPGPLRDRM 505
Query: 478 EVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLE 537
EV+ L GYT EEK IA R+L+ R L+ GL E L I + + +I+ YTREAGVRNLE
Sbjct: 506 EVLHLAGYTQEEKREIARRYLVTRQLEDSGLKPEQLAITDDALAAIIRDYTREAGVRNLE 565
Query: 538 RNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHE 597
R + A+ R AV++AE E +
Sbjct: 566 RQIGAVCRRTAVRIAEGEIQ---------------------------------------- 585
Query: 598 VSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEAT 657
T R+ +P +V+ VLGP +F++ E A R PG++ GL WT GG++ F+EA+
Sbjct: 586 ---TARVDAPDLVE------VLGPAKFEN-EVALRAGMPGVATGLAWTPVGGDILFIEAS 635
Query: 658 AMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGA 717
G G L LTGQLGDV+KESAQ ALT V++RA L L+ D+HIH PAGA
Sbjct: 636 RTAGTGRLILTGQLGDVMKESAQAALTLVKSRAATFGL----DPATLEKVDVHIHVPAGA 691
Query: 718 VPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIK 777
+PKDGPSAGV + AL SLF + VR+D AMTGE++LRGLVLPVGG+K+K+LAA GIK
Sbjct: 692 IPKDGPSAGVAMFIALASLFMNRPVRSDVAMTGEISLRGLVLPVGGIKEKMLAALAAGIK 751
Query: 778 RVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+V+LP RN KDL EVP LE + +++ + A +
Sbjct: 752 KVMLPARNRKDLEEVPLPARQQLEFVYLDDIDEAVLAAID 791
>gi|56421185|ref|YP_148503.1| ATP-dependent Lon protease [Geobacillus kaustophilus HTA426]
gi|56381027|dbj|BAD76935.1| ATP-dependent Lon protease [Geobacillus kaustophilus HTA426]
Length = 775
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 322/786 (40%), Positives = 477/786 (60%), Gaps = 85/786 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G AR L ++ P+G T+ V++EG+ R + E+ + Y+ +
Sbjct: 68 YKMGTIARVKQL---LKLPNG--TFRVLVEGVARALITEVISEEPYFLVK---------- 112
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-----LLETVPIHKLADIFV 160
VE+ D A + +A ++ EQ R V +++ ++ADI
Sbjct: 113 ---VEKFADRAAKDLEDEALKRTMLEYFEQYINLSKRLSVDIYASIVDIDEPGRMADIIA 169
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ + EE+ +L+++D+K RL+K +++ + +++ +KI+ +V+ + ++QKE+ L
Sbjct: 170 SHLPLKLEEKQRILETIDVKERLNKIIQILHNEKEVLQLEKKISARVKQSMERTQKEYYL 229
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
R+QM+AI++ELG+ + ++ L+ K+++AGMP ++ + KEL R +K+
Sbjct: 230 REQMKAIQKELGEKEGKTSEVEELKEKIEAAGMPEHVKQTALKELDRYEKIPATSAESAV 289
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + LPW K +E+I D+K A+ L+ +HYGL +VK+R++E+L+V++L +G
Sbjct: 290 IRNYLDWLIALPWSKETEDIH-DIKRAEAILNEEHYGLDKVKERVLEFLSVKQLTKSLKG 348
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC GPPGVGKTSLA SIA ALGR+F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G
Sbjct: 349 PILCLAGPPGVGKTSLARSIAKALGRRFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQG 408
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+K+ G NPV LLDEIDK SD RGDP++A+LEVLDPEQN TF+DHY+ P+DLSKV+F+
Sbjct: 409 MKKAGTINPVFLLDEIDKMSSDFRGDPSAAMLEVLDPEQNHTFSDHYIEEPYDLSKVMFI 468
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
ATAN IP PLLDRMEVI +PGYT EKL IA RHL+P+ + +HGL LQI + +
Sbjct: 469 ATANHLAAIPQPLLDRMEVIHIPGYTEVEKLHIAKRHLLPKQITEHGLKKAALQIRDDAM 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR LER LAA+ R AA + E+++
Sbjct: 529 LDIIRHYTREAGVRELERQLAAICRKAARLIVSGEKKR---------------------- 566
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLG--PPRFDDREAAERVAAPGI 638
+V+ E LE+ LG R+ EA ++V G+
Sbjct: 567 ---------------------------VVITENNLEEFLGKRKYRYGRAEAEDQV---GV 596
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
+ GL +T FGG+ +E + G G+L LTG+LGDV+KESAQ A ++VR+RA +L +
Sbjct: 597 ATGLAYTAFGGDTLAIEVSLAPGNGKLVLTGKLGDVMKESAQAAFSYVRSRAEELDI--- 653
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ DIHIH P GAVPKDGPSAG+T+ TAL+S + K V MTGE+TLRG V
Sbjct: 654 -DPKFHEKYDIHIHVPEGAVPKDGPSAGITIATALISALTGKPVSRFVGMTGEITLRGRV 712
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
L +GG+K+K L+AHR G+K VILP+ N KDL ++P V L +L +++VL A G
Sbjct: 713 LAIGGLKEKTLSAHRAGLKTVILPKDNEKDLADIPETVKRDLRFVLVSHLDEVLPHALVG 772
Query: 819 GCPWRQ 824
W++
Sbjct: 773 ---WKR 775
>gi|348026431|ref|YP_004766236.1| endopeptidase La [Megasphaera elsdenii DSM 20460]
gi|341822485|emb|CCC73409.1| endopeptidase La [Megasphaera elsdenii DSM 20460]
Length = 777
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 326/756 (43%), Positives = 465/756 (61%), Gaps = 72/756 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V +V G+ R +Q S + Y +++++ +I +VE++ AL R
Sbjct: 88 PGGLVRILV--NGISRVRMQGFSQKADYLEG--AAVKVAEISRNEVEEE----ALRRVVL 139
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS---FEISFEEQLVMLDSVDLK 180
++ + L ++ K + E LAD F AS I +QL L++ D++
Sbjct: 140 KRLLDWLGNLRDGEEASENAKNIDEP---GVLAD-FAASQLPLRIVIRQQL--LETADVE 193
Query: 181 VRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 240
RL + L+D + + K+ +V G++ + QKE+ LR++++AI EELGD D + +
Sbjct: 194 ARLRRIASLLDTEVDIANLESKLNMEVRGKMDQQQKEYYLREKIKAIHEELGDKVDKDTE 253
Query: 241 LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI 300
+ L K++ + +I K + KE+ RL M P R YL+ LPW+K +++
Sbjct: 254 VQELRDKIKKMKLDEDIEKALLKEVDRLDSMPPMMAESAIIRTYLDWAMALPWKKETKD- 312
Query: 301 DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 360
LDL A++ LD DHYGL +VK RIIEYLAV++L +GP+LCFVGPPG GKTS+A SI
Sbjct: 313 RLDLNEAQKVLDEDHYGLKKVKDRIIEYLAVKQLTNSLKGPILCFVGPPGTGKTSIAKSI 372
Query: 361 ASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTG 420
A A+ RK++R+SLGGV+DEA+IRGHRRTYIG++PGR++ G+K+ GV NPV LLDEIDK
Sbjct: 373 ARAMNRKYVRVSLGGVRDEAEIRGHRRTYIGALPGRILAGMKQAGVKNPVFLLDEIDKMT 432
Query: 421 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVI 480
SD+RGDP+SA+LEVLDPEQN TF+DH+L +PFDLSKV ++ TAN IP PL+DRME+I
Sbjct: 433 SDMRGDPSSAMLEVLDPEQNNTFSDHFLELPFDLSKVFWITTANVLSDIPRPLMDRMEII 492
Query: 481 ELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNL 540
+ YT EEK++IA R+L+P+ + ++GL + +A+++ +I+ YTRE+GVRNLE+ +
Sbjct: 493 DFTSYTEEEKVQIAKRYLVPKQVKENGLRPSQAKFSDAVLRRIIEGYTRESGVRNLEKTI 552
Query: 541 AALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSN 600
+ R R+G LL N EV
Sbjct: 553 GTVCR----------------------RIGKSLLMN-------------------DEV-- 569
Query: 601 TFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
PL V LEK+LGP +F E + GI G+ WT GGEV EA A++
Sbjct: 570 ------PLSVSVKNLEKLLGPVKFLP-ETVHKDDEVGIVTGMAWTQVGGEVLETEAVAVK 622
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPK 720
GKG L LTGQLGDV+KESA+ +T+VR+RA L + A+ N+ D+HIH P GA+PK
Sbjct: 623 GKGRLLLTGQLGDVMKESAEAGVTYVRSRADVLGIDADFYANM----DLHIHLPEGAIPK 678
Query: 721 DGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVI 780
DGPSAG+T+ TA+ S + K VR D AMTGE+TLRG VLPVGG+K+K++AAHR GIK+++
Sbjct: 679 DGPSAGITMATAITSALTGKAVRHDVAMTGEITLRGTVLPVGGIKEKVIAAHRAGIKKIL 738
Query: 781 LPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LPE N +D+ EVP +V ++ + M++VL QA
Sbjct: 739 LPEENKRDMDEVPQSVKKDVKFVFVHHMDEVLAQAL 774
>gi|431794977|ref|YP_007221882.1| ATP-dependent proteinase [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430785203|gb|AGA70486.1| ATP-dependent proteinase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 804
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 302/663 (45%), Positives = 428/663 (64%), Gaps = 55/663 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LADI + + ++ +L+++D+ RL + TE++ R + + + +I +V Q+ K
Sbjct: 161 RLADIVASHLNLKIGDKQSILEALDVAERLERLTEIIMRENEVLELERRIGLRVRKQMEK 220
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+ LR+QM+AI++ELGD D+ + ++ K+ P + + KE+ RL+KM
Sbjct: 221 TQKEYYLREQMKAIQKELGDKDEKQAEVEEYREKVAQGKFPKEVEERALKEIDRLEKMPQ 280
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R YL+ I LPW + S++ +D+K A++ L+ DHYGL +VK+RI+E+LA+RK
Sbjct: 281 ASSEGTVVRTYLDWIIALPWTQISKD-KMDIKRAEKILNEDHYGLEKVKERILEFLAIRK 339
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L P + P++CFVGPPGVGKTSLA S+ASAL RKF+R+SLGGV+DEA+IRGHRRTYIG++
Sbjct: 340 LTPKMKSPIICFVGPPGVGKTSLAKSVASALDRKFVRMSLGGVRDEAEIRGHRRTYIGAL 399
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I G++ G NPV LLDEIDK SD RGDPASALLEVLDPEQN +F+DHYL++P+D
Sbjct: 400 PGRIIQGMRNAGTANPVFLLDEIDKMASDFRGDPASALLEVLDPEQNNSFSDHYLDLPYD 459
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS+ +F+ TAN IP PLLDRMEVI L GYT EEK+ IA R+L+P+ L HGL + L
Sbjct: 460 LSRTLFIMTANTVHSIPQPLLDRMEVISLSGYTEEEKVNIAKRYLVPKQLKAHGLKNAQL 519
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ + ++ ++Q YTRE+GVRNLER +A L R A +V ++E
Sbjct: 520 VVEDEILLKIVQGYTRESGVRNLERQIANLCRKVATRVVKKEW----------------- 562
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
M E+ +P +++E +LG R+ E A
Sbjct: 563 -----------------MTET----------LTPEMLEE-----LLGAQRY-HFEKARLK 589
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G + GL +T GG+V +E + GKG+L LTG+LGDV+KESA T++R+ + +L
Sbjct: 590 PEIGAATGLAYTQVGGDVLTIEVVPLPGKGQLTLTGKLGDVMKESAYAGRTFIRSHSREL 649
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ + + D+HIH P GA+PKDGPSAG+T+ TA+ S +++ V +D AMTGE+T
Sbjct: 650 GIPD----DFYEKTDLHIHVPEGAIPKDGPSAGITMATAMASALTKRAVPSDLAMTGEIT 705
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GGVK+K+LAAHR GIK+VILPE+N KDL EVP V +E RME+V +
Sbjct: 706 LRGNVLPIGGVKEKVLAAHRAGIKKVILPEQNRKDLEEVPKNVCEEMEFHFVSRMEEVAQ 765
Query: 814 QAF 816
A
Sbjct: 766 IAL 768
>gi|298529738|ref|ZP_07017141.1| ATP-dependent protease La [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511174|gb|EFI35077.1| ATP-dependent protease La [Desulfonatronospira thiodismutans
ASO3-1]
Length = 805
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 301/660 (45%), Positives = 430/660 (65%), Gaps = 59/660 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ ++ + + +L+ D RL E + R ++ + KI + + K
Sbjct: 194 RLADLVASNLRMKPADAQQILECDDPLQRLKMVNEQLVREVEVASMQAKIQNMAKEGMDK 253
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+Q+E+ LR+Q++AI++ELGD + DDL L ++ A +P+ + K +K+L+RL+ M P
Sbjct: 254 AQREYFLREQLKAIRKELGDVTESGDDLEQLRESLKKARLPAKVMKEAEKQLQRLENMHP 313
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T +R YLE + ++PW+K +++ LD+K A++ L+ DHY L +VK+RI+EYL+VRK
Sbjct: 314 DSAESTVARTYLEWLVEIPWKKKTKD-RLDIKEAQKILNDDHYDLEKVKERILEYLSVRK 372
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L P +GP+LCFVGPPGVGKTSL SIA +L RKF+R+SLGG++DEA+IRGHRRTYIGSM
Sbjct: 373 LNPRMKGPILCFVGPPGVGKTSLGQSIARSLNRKFVRMSLGGMRDEAEIRGHRRTYIGSM 432
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I +K G NPV +LDEIDK G+D RGDP+SALLEVLDPEQN +F DHYLNVP+D
Sbjct: 433 PGRIIQSMKEAGSVNPVFMLDEIDKVGADFRGDPSSALLEVLDPEQNHSFTDHYLNVPYD 492
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+F+ T+N IP LLDRMEVI +PGYT +EK+ IA ++L+PR + + GL + +
Sbjct: 493 LSKVMFICTSNILDTIPSALLDRMEVIRIPGYTEQEKVHIARKYLLPRQIKESGLKEKDI 552
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ + ++K +I+ YTREAG+RNLER + A+ R A +VAE ++
Sbjct: 553 SLSDGVLKEIIRNYTREAGLRNLEREIGAVCRKIARQVAEGKK----------------- 595
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRF--DDREAAE 631
FRIT V +K+LG P++ +DR E
Sbjct: 596 --------------------------GPFRITRKKV------DKLLGVPKYMPEDR---E 620
Query: 632 RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
+ G+++GL WT +GGE+ VE + M GKG+L LTGQ+G+V+KESAQ AL++ R+RA
Sbjct: 621 KELPAGVAIGLAWTAYGGEILHVEVSLMPGKGKLILTGQMGEVMKESAQAALSYARSRAK 680
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
L L +LL RDIHIH PAGA PKDGPSAG+T+V+ALVS + + D MTGE
Sbjct: 681 TLGL----DEDLLDKRDIHIHVPAGATPKDGPSAGLTMVSALVSALLDRPLPGDIGMTGE 736
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLPVGG+K+KILAA G+K VI+P+ N +D E+P + ++++ + M+ +
Sbjct: 737 ITLRGRVLPVGGIKEKILAAVASGVKTVIIPDSNKRDFNEIPPELRKTIQVKTVENMDQI 796
>gi|339626879|ref|YP_004718522.1| ATP-dependent protease La [Sulfobacillus acidophilus TPY]
gi|379008735|ref|YP_005258186.1| ATP-dependent proteinase [Sulfobacillus acidophilus DSM 10332]
gi|339284668|gb|AEJ38779.1| ATP-dependent protease La [Sulfobacillus acidophilus TPY]
gi|361054997|gb|AEW06514.1| ATP-dependent proteinase [Sulfobacillus acidophilus DSM 10332]
Length = 777
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 320/748 (42%), Positives = 462/748 (61%), Gaps = 67/748 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELI- 130
VV+EG R +VQ + R T++ A + +E E D + T ++L
Sbjct: 85 VVVEGKARATVQAIYDRDTHFAALVEEIE---------EPSEDVGQETEALMHTVVDLFE 135
Query: 131 SVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+ ++ +K G V L +LAD V + +I +E+ +L++ + RLSK ++++
Sbjct: 136 AYVKNSRKMPGEASVTLNIDDPGRLADTVVMNLDIRTQEKQEVLETFPIDERLSKVSDIL 195
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
R ++ + + ++I +V Q+ +SQKE+ LR+Q++AI+ ELG+ D+ + ER +
Sbjct: 196 SRQIELLEIEKRIHVRVRKQMERSQKEYYLREQLKAIQRELGEQDEAPETEEYRERLERL 255
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
+P + + + +E+ RL KM P R YL+ + DLPW +EE +D++ A+
Sbjct: 256 GEVPEPVREKITREIDRLAKMSPLSAEAVVVRTYLDWLLDLPWAITTEE-RVDVEEAERI 314
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
L+ DHYGL +VK RI+E+L+V L P +GP+LC VGPPGVGKTSLA SIA A GR+F+R
Sbjct: 315 LNEDHYGLQKVKDRILEHLSVLALAPHIKGPILCLVGPPGVGKTSLARSIARATGRRFVR 374
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV+DEA+IRGHRRTY+G+MPGR+I G+++ G NP+ LLDE+DK +D RGDP++A
Sbjct: 375 VSLGGVRDEAEIRGHRRTYVGAMPGRIIQGMRQAGSKNPLFLLDEVDKMATDFRGDPSAA 434
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDPEQN F+DHY+ +PFDLS V+F+ATAN IP PL+DRMEVI +PGYT EEK
Sbjct: 435 LLEVLDPEQNAHFSDHYIELPFDLSAVMFIATANVLHSIPRPLMDRMEVIHIPGYTEEEK 494
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
+ IA R+L PR L+QHGL + + + +++LVI+ YTREAGVR LER+LA + R AA
Sbjct: 495 ISIAERYLWPRQLEQHGLSHDRVVLGRRVLQLVIRHYTREAGVRELERSLATICRKAARD 554
Query: 551 VAE-QEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLV 609
+ + + Q+ + S + V LG+P + RL
Sbjct: 555 IVQGKTQKVVVTSQRLVRYLGAPRI--RL------------------------------- 581
Query: 610 VDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTG 669
E+AE G+ GL T GG++ +E T M GKG+L LTG
Sbjct: 582 ------------------ESAEMTQQTGVVTGLAVTEAGGDILSIEVTTMPGKGQLTLTG 623
Query: 670 QLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTL 729
QLG+V++ESA+ ++VR+RA +L + + + D+H+H PAGA+PKDGPSAG+ +
Sbjct: 624 QLGEVMQESARAGYSYVRSRARELGI----DPHFNEALDVHVHVPAGAIPKDGPSAGIAI 679
Query: 730 VTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDL 789
TALVS S + VR AMTGE+TLRG VLPVGG+K+KILAAHR ++ VI+PE N DL
Sbjct: 680 ATALVSALSGRAVRPKWAMTGEITLRGRVLPVGGIKEKILAAHRAHMEHVIIPEENRVDL 739
Query: 790 VEVPAAVLASLEIILAKRMEDVLEQAFE 817
EVP V ++I LA+ ++DVLE E
Sbjct: 740 DEVPPFVKRQVKIHLAQHLDDVLEWVLE 767
>gi|320161233|ref|YP_004174457.1| ATP-dependent protease La [Anaerolinea thermophila UNI-1]
gi|319995086|dbj|BAJ63857.1| ATP-dependent protease La [Anaerolinea thermophila UNI-1]
Length = 839
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 335/781 (42%), Positives = 474/781 (60%), Gaps = 97/781 (12%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSR--- 120
P G + +V +G+ RF +++ + Y A I ++ E VE+ + AL+R
Sbjct: 102 PDGTIRLLV--QGIHRFILKDFTQIEPYLRANI------ELAPETVEEGLEIEALARNAR 153
Query: 121 -QFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFE---ISFEEQLVMLDS 176
QFK A ELI ++ +E + L VA+F+ + E ++ LDS
Sbjct: 154 DQFKRIA-ELIPSFPRELVAS------IEAIEDPLLTVYTVANFQRMDLEDAEAILELDS 206
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
V K L K T ++ R ++ + + +KI + ++ K Q+E+ LR+QM+AI+ ELG+ D+
Sbjct: 207 VTEK--LKKLTTILTREIEVLELGQKIQNEARSEIEKVQREYFLREQMKAIQRELGEMDE 264
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
++ +K+++AGMP +K ++EL RL ++ Y R YL+ + LPW K
Sbjct: 265 QAAEVEEFRQKIEAAGMPEEAYKQARRELDRLSRLPTAAAEYGVIRTYLDWLVSLPWSKL 324
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK-------PDARGP-------- 341
+++ +LD+ A+E L++DHYGL VK+RI+E+LAVRKL+ P+ P
Sbjct: 325 TQD-NLDIPHAREVLEADHYGLEDVKERILEFLAVRKLRLERQKETPEETQPTDLIRKQR 383
Query: 342 ---VLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLI 398
+LCFVGPPGVGKTSL SIA ALGRKF+RISLGGV+DEA+IRGHRRTYIG+MPGR+I
Sbjct: 384 EGVILCFVGPPGVGKTSLGQSIARALGRKFVRISLGGVRDEAEIRGHRRTYIGAMPGRII 443
Query: 399 DGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVI 458
L+RV NPV +LDEIDK G+D RGDPASALLEVLDPEQN F D+Y+ V FDLS+V+
Sbjct: 444 QALRRVESRNPVFMLDEIDKLGADFRGDPASALLEVLDPEQNSDFRDNYIEVGFDLSQVM 503
Query: 459 FVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEA 518
F+ TAN+ + IPPPLLDRME+I + GYT EK+ IA ++L+PR L ++GL E Q
Sbjct: 504 FITTANQLETIPPPLLDRMEIISISGYTEGEKVEIAKQYLVPRQLKENGLKPEEAQFTAE 563
Query: 519 MVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRL 578
++ +I+ YTREAGVRNLER + ++ R A ++ EQ+
Sbjct: 564 ALRTIIRTYTREAGVRNLEREIGSVLRKIATRITEQKH---------------------- 601
Query: 579 ADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRF-DDREAAERVAAPG 637
VE E+ P E+ E+ LG PR+ + E R + PG
Sbjct: 602 -----VEPEITP--ETVREL--------------------LGQPRYHTNDEINIRTSQPG 634
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+++GL WT GG++ FVEAT M G +TG +G+V++ESA+ AL+ VRARA + A
Sbjct: 635 VAIGLAWTPVGGDILFVEATRMPGAKGFTVTGSIGNVMQESARAALSLVRARAEKYNIPA 694
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
+ D+HIH PAGA PKDGPSAGVT+ TALVSL + + V++D MTGE+TLRG
Sbjct: 695 ----DFFDKSDLHIHVPAGAQPKDGPSAGVTITTALVSLLTNRPVKSDVGMTGEITLRGQ 750
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+LPVGG+K+K+LAAHR G+K VILP+ N DL E+P V S+ +L ++++VLE A E
Sbjct: 751 ILPVGGIKEKVLAAHRAGLKTVILPKLNQSDLDELPEEVKKSIRFVLVDQIDEVLEVAVE 810
Query: 818 G 818
Sbjct: 811 A 811
>gi|332290244|ref|YP_004421096.1| DNA-binding ATP-dependent protease La [Gallibacterium anatis
UMN179]
gi|330433140|gb|AEC18199.1| DNA-binding ATP-dependent protease La [Gallibacterium anatis
UMN179]
Length = 799
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 327/757 (43%), Positives = 465/757 (61%), Gaps = 71/757 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R V + YY+A IS E+T+I VE D +
Sbjct: 83 PDGTVK--VLVEGKSRAKVLSFES-DEYYSAEIS--EITEIVDNDVELDV--------IQ 129
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLK 180
T + + +Q + +VL IH KL D + ++ +++ +L+ ++
Sbjct: 130 TTVLTELDKFAHQQHNKVKPEVLTALKDIHDPKKLVDTLAGNMPLALDKKQALLEQENVF 189
Query: 181 VRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 240
R L+ ++ + +KI +V+ Q+ K+Q+++ L +Q++AI++ELG+ + E++
Sbjct: 190 ARFETLLGLIQAEMEISSLDKKIRDRVKKQMEKNQRDYYLNEQIKAIQKELGEAETVENE 249
Query: 241 LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI 300
+ L++K+ A MP + + + EL++LK M P T R Y++ + +PW K ++ +
Sbjct: 250 VQQLKKKIADAKMPKEVQEKAESELQKLKMMSPMSAEATVVRTYIDWMVQVPWHKRTK-V 308
Query: 301 DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 360
DLK A+ L++DHYGL RVK+RI+EYLAV+ RGP+LC VGPPGVGKTSL SI
Sbjct: 309 KKDLKQAEVILNNDHYGLERVKERILEYLAVQTRTNQIRGPILCLVGPPGVGKTSLGQSI 368
Query: 361 ASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTG 420
A A GRK++R++LGGV+DEA+IRGHRRTYIG++PG+LI + +VGV NP+ LLDEIDK G
Sbjct: 369 AQATGRKYVRMALGGVRDEAEIRGHRRTYIGALPGKLIQNMAKVGVKNPLFLLDEIDKLG 428
Query: 421 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVI 480
+D+RGDPASALLEVLDPEQN TF+DHYL V +DLS V+FVAT+N + IP PLLDRMEVI
Sbjct: 429 ADMRGDPASALLEVLDPEQNNTFSDHYLEVDYDLSDVMFVATSN-SMNIPGPLLDRMEVI 487
Query: 481 ELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNL 540
L GYT +EKL IAMRHL+ + ++++GL ++ L I E + +I+ YTREAGVRNLER +
Sbjct: 488 RLSGYTEDEKLNIAMRHLLNKQMERNGLKAKELTIKEEAILDIIRYYTREAGVRNLEREI 547
Query: 541 AALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSN 600
+ + R A + LLD L
Sbjct: 548 SKICRKAVKNL---------------------LLDKSLKQ-------------------- 566
Query: 601 TFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
+VVD + L LG RF+ +A + G GL WT GG++ +EA ++
Sbjct: 567 -------VVVDSSNLHDYLGVRRFEYGKADNQNRV-GEVTGLAWTEVGGDLLTIEAASVS 618
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPK 720
GKG+L+ TG LGDV+KES Q A+T VRARA L + + + RDIHIH P GA PK
Sbjct: 619 GKGKLNYTGSLGDVMKESIQAAMTVVRARAEQLGI----NTDFYEKRDIHIHVPEGATPK 674
Query: 721 DGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVI 780
DGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR GIKRV+
Sbjct: 675 DGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGKVLPIGGLKEKLLAAHRGGIKRVL 734
Query: 781 LPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+P+ N+KDL E+P ++L+I + +++VL A E
Sbjct: 735 IPKDNVKDLEEIPENAKSALDIRPVETIDEVLALALE 771
>gi|261418334|ref|YP_003252016.1| ATP-dependent protease La [Geobacillus sp. Y412MC61]
gi|319767707|ref|YP_004133208.1| ATP-dependent protease La [Geobacillus sp. Y412MC52]
gi|261374791|gb|ACX77534.1| ATP-dependent protease La [Geobacillus sp. Y412MC61]
gi|317112573|gb|ADU95065.1| ATP-dependent protease La [Geobacillus sp. Y412MC52]
Length = 775
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 322/786 (40%), Positives = 477/786 (60%), Gaps = 85/786 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G AR L ++ P+G T+ V++EG+ R + E+ + Y+ +
Sbjct: 68 YKMGTIARVKQL---LKLPNG--TFRVLVEGVARALITEVISEEPYFLVK---------- 112
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-----LLETVPIHKLADIFV 160
VE+ D A + +A ++ EQ R V +++ ++ADI
Sbjct: 113 ---VEKFADRAAKDLEDEALKRTMLEYFEQYINLSKRLSVDIYASIVDIDEPGRMADIIA 169
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ + EE+ +L+++D+K RL+K +++ + +++ +KI+ +V+ + ++QKE+ L
Sbjct: 170 SHLPLKLEEKQRILETIDVKERLNKIIQILHNEKEVLQLEKKISARVKQSMERTQKEYYL 229
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
R+QM+AI++ELG+ + ++ L+ K+++AGMP ++ + KEL R +K+
Sbjct: 230 REQMKAIQKELGEKEGKTGEVEELKEKIEAAGMPEHVKQTALKELDRYEKIPATSAESAV 289
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + LPW K +E+I D+K A+ L+ +HYGL +VK+R++E+L+V++L +G
Sbjct: 290 IRNYLDWLIALPWSKETEDIH-DIKRAEAILNEEHYGLDKVKERVLEFLSVKQLTKSLKG 348
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC GPPGVGKTSLA SIA ALGR+F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G
Sbjct: 349 PILCLAGPPGVGKTSLARSIAKALGRRFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQG 408
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+K+ G NPV LLDEIDK SD RGDP++A+LEVLDPEQN TF+DHY+ P+DLSKV+F+
Sbjct: 409 MKKAGTINPVFLLDEIDKMSSDFRGDPSAAMLEVLDPEQNHTFSDHYIEEPYDLSKVMFI 468
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
ATAN IP PLLDRMEVI +PGYT EKL IA RHL+P+ + +HGL LQI + +
Sbjct: 469 ATANHLAAIPQPLLDRMEVIHIPGYTEVEKLHIAKRHLLPKQITEHGLKKAALQIRDDAM 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR LER LAA+ R AA + E+++
Sbjct: 529 LDIIRHYTREAGVRELERQLAAICRKAARLIVSGEKKR---------------------- 566
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLG--PPRFDDREAAERVAAPGI 638
+V+ E LE+ LG R+ EA ++V G+
Sbjct: 567 ---------------------------VVITENNLEEFLGKRKYRYGRAEAEDQV---GV 596
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
+ GL +T FGG+ +E + G G+L LTG+LGDV+KESAQ A ++VR+RA +L +
Sbjct: 597 ATGLAYTAFGGDTLAIEVSLAPGNGKLVLTGKLGDVMKESAQAAFSYVRSRAEELDI--- 653
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ DIHIH P GAVPKDGPSAG+T+ TAL+S + K V MTGE+TLRG V
Sbjct: 654 -DPKFHEKYDIHIHVPEGAVPKDGPSAGITIATALISALTGKPVSRFVGMTGEITLRGRV 712
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
L +GG+K+K L+AHR G+K VILP+ N KDL ++P V L +L +++VL A G
Sbjct: 713 LAIGGLKEKTLSAHRAGLKTVILPKDNEKDLADIPETVKRDLRFVLVSHLDEVLPHALVG 772
Query: 819 GCPWRQ 824
W++
Sbjct: 773 ---WKR 775
>gi|319787634|ref|YP_004147109.1| ATP-dependent protease La [Pseudoxanthomonas suwonensis 11-1]
gi|317466146|gb|ADV27878.1| ATP-dependent protease La [Pseudoxanthomonas suwonensis 11-1]
Length = 822
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 342/777 (44%), Positives = 474/777 (61%), Gaps = 62/777 (7%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A L L ++ P G T V++EG R V +++ R R +E
Sbjct: 69 YTVGTLATVLQL---LKLPDG--TIKVLVEGTARMQVGDIAERDGALHGRGELVEADS-- 121
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
+DP R+ +A A L + EQ KT + LL+T+ +LAD
Sbjct: 122 ----SRDP------REIEAVARTLSGLFEQYVKTNRKLPPELLQTLSGIEEPGRLADTIS 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L++ D RL LV+ + ++ ++I +V+ Q+ +SQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLETFDTGERLELLVGLVEGEIDVQQMEKRIRGRVKSQMERSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDSPGELEELARKIAEAGMPKAVETKAKSELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K S+ + DLKAA++ LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRSK-VRKDLKAAQDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V+FV
Sbjct: 411 LNKVGTKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNHSFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ +GL E L I E +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLSIATRYLVPKQQKANGLKPEELSIAEDAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A + E A +++
Sbjct: 530 RDIVRYYTRESGVRNLEREIAKICRKVVKEIALRGPEPAKKAARKA---------PARRK 580
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
GA V+ VD A L+K LG RFD A E+ G+
Sbjct: 581 GALVQ------------------------VDAANLDKYLGVRRFDFGRAEEQNEI-GLVT 615
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +E T + GKG+L LTGQLGDV+KESA AL+ VRARA L +
Sbjct: 616 GLAWTEVGGDLLQIEGTLVPGKGQLILTGQLGDVMKESASAALSVVRARAERLGI----E 671
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ +D+H+H P GA PKDGPSAG+ +VTALVS ++ VRAD AMTGE+TLRG V
Sbjct: 672 VDFLQKQDVHLHVPDGATPKDGPSAGIAMVTALVSTLTKVPVRADIAMTGEITLRGKVTA 731
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI+ V++PE N KDL ++PA V +EI+ K +++VL+ A E
Sbjct: 732 IGGLKEKLLAALRGGIRTVVIPEENRKDLADIPANVTDGMEIVPVKWIDEVLDLALE 788
>gi|408492585|ref|YP_006868954.1| ATP-dependent protease Lon [Psychroflexus torquis ATCC 700755]
gi|408469860|gb|AFU70204.1| ATP-dependent protease Lon [Psychroflexus torquis ATCC 700755]
Length = 815
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/772 (40%), Positives = 458/772 (59%), Gaps = 70/772 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H GV AR L R ++ P G T V+++G RF + EL + Y ++ E K E
Sbjct: 102 HKVGVVARIL---RVLKMPDGNTT--VIIQGKKRFKITELVSDQPYLKCKVEEFEELKPE 156
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FE 164
+ D +F + K ++ +I + ++ + FV+S
Sbjct: 157 SD----DNEFETIIDSVKDLSLRII---KDSPNIPSEASFAIKNIESSSFLINFVSSNMN 209
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+ E++ +L++ DLK R + ++ Q + + I KV+ +S+ Q+E+ L QQM
Sbjct: 210 VDVEDKQKLLETSDLKERALSTLKYMNLEFQKLELKNDIQSKVQNDMSQQQREYFLHQQM 269
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+ I+EELG E ++ + + ++ + H KEL +L+KM PQ Y+ R Y
Sbjct: 270 KTIQEELG-GVSSEGEVDDMRERAKAKEWKETVETHFNKELGKLQKMNPQVAEYSIQRNY 328
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
L+L DLPW+ S++I DLK A++ LD DHYGL VK+RIIEYLAV KL+ D + P+LC
Sbjct: 329 LDLFLDLPWDHYSDDI-FDLKRAQKVLDRDHYGLEDVKRRIIEYLAVLKLRKDMKSPILC 387
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
GPPGVGKTSL SIA ALGRK+ R+SLGG++DEA++RGHR+TYIG+MPGR+I LK+
Sbjct: 388 LYGPPGVGKTSLGKSIAEALGRKYARVSLGGLRDEAEVRGHRKTYIGAMPGRIIQSLKKA 447
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G NPV +LDEIDK G+ +GDP+SALLEVLDPEQN F+D++L V +DLSKV+FVATAN
Sbjct: 448 GTGNPVFVLDEIDKIGNSHQGDPSSALLEVLDPEQNNDFHDNFLEVGYDLSKVMFVATAN 507
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
I P L DRME+I + GYT EEK+ IA RHL+P+ + +HG+ E +++ + ++ +I
Sbjct: 508 NLATIHPALRDRMEIINVSGYTVEEKIEIAKRHLVPKQISEHGIKKEDIKLGKQQLEKII 567
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEV 584
+ YTRE+GVRNLE+ +A + R A +A +E D +++DGA
Sbjct: 568 EGYTRESGVRNLEKQVAKVIRNIAKNIAMEED-----------------YDVKVSDGA-- 608
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
+EK+LGP R R + E G+ GL W
Sbjct: 609 ------------------------------VEKILGPSR--PRNSYENNDVAGVVTGLAW 636
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T+ GGE+ F+E+ +GKG L +TG LG V+KESA IA+ ++++ A L ++
Sbjct: 637 TSVGGEILFIESILSKGKGNLSITGNLGKVMKESATIAMEYIKSNAEKFDL----NTDIF 692
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
++HIH P GA PKDGPSAGVT++T+LVSLF++++++ + AMTGE+TLRG +LPVGG+
Sbjct: 693 TNYNVHIHVPEGATPKDGPSAGVTMLTSLVSLFTQRKIKKNLAMTGEITLRGKILPVGGI 752
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K+KILAA R IK +IL E N KD+ E+ L L+I M +VL+ A
Sbjct: 753 KEKILAAKRAKIKEIILCEDNRKDIEEIKEDYLKGLKINYVSEMHEVLDLAL 804
>gi|338974252|ref|ZP_08629614.1| ATP-dependent protease LaType I [Bradyrhizobiaceae bacterium SG-6C]
gi|338232979|gb|EGP08107.1| ATP-dependent protease LaType I [Bradyrhizobiaceae bacterium SG-6C]
Length = 811
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 333/794 (41%), Positives = 472/794 (59%), Gaps = 86/794 (10%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q ASD + I+ G A L L ++ P G V V++EGL R + + R
Sbjct: 66 QKNASDDDPAPDSIY--EIGTLASVLQL---LKLPDGTVK--VLVEGLERGKAGKYTDRA 118
Query: 90 TYYTARISSL---EMTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
+Y A +++L + T +E E + + DF + + K + E++ V++Q
Sbjct: 119 EFYEASVTALADLDATSVEAEALSRSVISDFESYVKLNKKISAEVVGVVQQ--------- 169
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
KLAD + + ++ +L+++ + RL K L++ + ++V +KI
Sbjct: 170 ----ITDFAKLADTVASHLAVKISDRQTILETLSVSQRLEKVMGLMESEISVLQVEKKIR 225
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELGD D+ D+L LE K+ + + Q E
Sbjct: 226 SRVKRQMEKTQREYYLNEQMKAIQKELGD-DEGRDELADLEEKINKTKLSKEAREKAQHE 284
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L++L++M P T R YL+ + +PW K S+ + DL AA+E LDSDHYGL +VK R
Sbjct: 285 LKKLRQMSPMSAEATVVRNYLDWLLSIPWGKKSK-VKKDLVAAQEVLDSDHYGLEKVKDR 343
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRG
Sbjct: 344 IVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRG 403
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN+TFN
Sbjct: 404 HRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNQTFN 463
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP +
Sbjct: 464 DHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTENEKVEIARKHLIPAAIA 522
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+HGL S+ I + ++ +I+RYTREAGVRNLER ++ LAR A + L SK
Sbjct: 523 KHGLNSKEWSIDDEALQFLIRRYTREAGVRNLEREISTLARKAV---------KDLMISK 573
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP-- 622
T ++T+ A++E+ LG P
Sbjct: 574 ----------------------------------KKTVKVTA------AVVEEYLGVPKF 593
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
R+ E ++V G+ GL WT GGE+ +E+ M GKG + +TG L DV+KES A
Sbjct: 594 RYGSIETDDQV---GVVTGLAWTEVGGELLTIESVMMPGKGRMTVTGNLRDVMKESISAA 650
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA + + L RDIH+H P GA PKDGPSAGV + T++VS+ + +
Sbjct: 651 ASYVRSRAINYGIEPP----LFDRRDIHVHVPEGATPKDGPSAGVAMTTSIVSVLTGIPI 706
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V +PE N KDL E+ A+ LEI
Sbjct: 707 RHDVAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVFIPEDNAKDLTEISDAIKGGLEI 766
Query: 803 ILAKRMEDVLEQAF 816
I RM++VL +A
Sbjct: 767 IPVSRMDEVLAKAL 780
>gi|311031429|ref|ZP_07709519.1| LonA [Bacillus sp. m3-13]
Length = 774
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 323/801 (40%), Positives = 483/801 (60%), Gaps = 72/801 (8%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
+G D +++ +VG +D ++++ W + L L G T V++EGL
Sbjct: 43 LGDDIVVLSTQKEVG-TDNPAKEDLYTWGTLTKVKQMLKLPNG--------TVRVLVEGL 93
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
R ++E + T++ A++ + T+ E+DP+ AL R + L +K
Sbjct: 94 ERAKIEEFIEKDTHWEAKLLTYPDTE------EKDPEDEALMRTL-LDYFHTYTKLSKKT 146
Query: 138 KTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSI 197
V T P ++ADI + ++ +E+ +L++ D+K RL+K + V+ + +
Sbjct: 147 TIETYHTVSDITEP-GRMADIITSHLPVNMKEKQDILETRDVKERLNKVIKHVNNEKEVL 205
Query: 198 RVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNI 257
++ +KI +V+ + ++QKE+ LR+QM+AI++ELGD + ++ L+ K++ GMP N+
Sbjct: 206 QLEKKIGLRVKRSMERTQKEYYLREQMKAIQKELGDKEGKGGEIEDLKEKLEKIGMPENV 265
Query: 258 WKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYG 317
K KE+ R +K+ + R Y++ + +LPW +A+E+ L++ A+E L+ DH+G
Sbjct: 266 KKTALKEIDRYEKIPSSSAESSVIRNYIDWLMNLPWTEATED-QLNIIRAEEILNEDHFG 324
Query: 318 LVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVK 377
L +VK+R++EYLAV++L +GP+LC GPPGVGKTSLA SIA +L RKF+R+SLGGV+
Sbjct: 325 LEKVKERVLEYLAVQQLTKSLKGPILCLAGPPGVGKTSLARSIAKSLDRKFVRVSLGGVR 384
Query: 378 DEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDP 437
DE++IRGHRRTY+G+MPGR+I G+K+ G NPV LLDEIDK +D RGDP+SALLEVLDP
Sbjct: 385 DESEIRGHRRTYVGAMPGRIIQGMKKAGTINPVFLLDEIDKMSNDFRGDPSSALLEVLDP 444
Query: 438 EQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRH 497
EQN F+DHY+ P+DLS V+F+ATAN IP PL DRME+I + GYT EKL I H
Sbjct: 445 EQNFNFSDHYIEEPYDLSNVMFIATANNLATIPGPLRDRMEIITIAGYTEIEKLNIGKDH 504
Query: 498 LIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQE 557
L+PR +HGL LQI + + +I+ +TREAGVR+LER LA++ R AA + E++
Sbjct: 505 LLPRQAKEHGLQKNLLQIRDEALMSIIRHHTREAGVRSLERQLASICRKAAKLIVSGEKK 564
Query: 558 QALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEK 617
+ + + D LAD
Sbjct: 565 RVV------------ITDKNLAD------------------------------------- 575
Query: 618 VLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKE 677
LG P+F +A E G++ GL +T GG+ +E + GKG+L LTG+LGDV+KE
Sbjct: 576 FLGKPKFRYGQAEEEDQV-GVATGLAYTTVGGDTLSIEVSLSPGKGKLMLTGKLGDVMKE 634
Query: 678 SAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLF 737
SA A +++R+RA +L + + + DIHIH P GAVPKDGPSAG+T+ TAL+S
Sbjct: 635 SAHAAFSFIRSRADELNIDP----DFNEKNDIHIHVPEGAVPKDGPSAGITMATALISAL 690
Query: 738 SRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVL 797
+ + VR D MTGE+TLRG VLP+GG+K+K L+AHR G+K+VILP+ N KDL ++P +V
Sbjct: 691 TGRPVRRDVGMTGEITLRGRVLPIGGLKEKSLSAHRAGLKKVILPKENEKDLDDIPESVR 750
Query: 798 ASLEIILAKRMEDVLEQAFEG 818
L +L ++ VLE A G
Sbjct: 751 KDLTFVLVSHLDQVLEHALAG 771
>gi|315645733|ref|ZP_07898857.1| ATP-dependent protease La [Paenibacillus vortex V453]
gi|315279211|gb|EFU42521.1| ATP-dependent protease La [Paenibacillus vortex V453]
Length = 778
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 317/753 (42%), Positives = 459/753 (60%), Gaps = 65/753 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EG+ R V E + + YY L E+ DP+ AL R
Sbjct: 84 PNG--TIRVLVEGMERAEVIEYTDQEEYYEVMARELP------EEENHDPEVSALMRTVL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I++ K+ T + + +LAD+ + + +++ +L+++D++ RL
Sbjct: 136 SQFENYINL--SKKVTPETLAAVSDIDEPGRLADVITSHLSLKIKDKQEILETIDVRKRL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K ++++ + + + KI Q+V+ Q+ K+QKE+ LR+QM+AI++ELGD + ++
Sbjct: 194 EKLLDILNNEREVLELERKINQRVKKQMEKTQKEYYLREQMKAIQKELGDKEGRTGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L ++Q +P + + V+KE+ RL+KM R Y++ + LPW +E+ DLD
Sbjct: 254 LRSQLQELELPERVHEKVEKEIDRLEKMPASSAEGGVIRNYVDWLLALPWSSKTED-DLD 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
+ A++ LD DHYGL + K+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA +
Sbjct: 313 IVKAEQVLDEDHYGLEKPKERVLEYLAVQKLVKKMKGPILCLVGPPGVGKTSLARSIARS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L RKF+R+SLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV LLDEIDK SD
Sbjct: 373 LERKFVRVSLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGSMNPVFLLDEIDKMASDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP+SALLEVLDPEQN TF+DH++ +PFDLS V+FV TAN IP PLLDRMEV+ +P
Sbjct: 433 RGDPSSALLEVLDPEQNNTFSDHFVEIPFDLSNVMFVTTANVLHNIPRPLLDRMEVLYIP 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EKL+IA R+L+P+ +HGL +E L + E + VI+ YTRE+GVRNLE+ +AAL
Sbjct: 493 GYTELEKLQIANRYLLPKQKSEHGLEAEQLILDEEALMKVIREYTRESGVRNLEQQVAAL 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA ++ E ++D+
Sbjct: 553 CRKAAKQIVTHASESIEIKAEDI------------------------------------- 575
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
++ LG P+F AE G GL WT GGE +E T + G G
Sbjct: 576 ------------KEYLGIPKF-RYGMAELEDQVGTVTGLAWTEVGGETLTIEVTVVPGTG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A ++ R++A +L + + + D+HIH P GA+PKDGP
Sbjct: 623 KLTLTGKLGDVMKESAQAAFSFTRSKAVELGI----DPDFHEKLDVHIHIPEGAIPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S +++ V D AMTGE+TLRG VLP+GG+K+K LAAHR G K+++LP+
Sbjct: 679 SAGITIATALISSLTKRHVARDVAMTGEITLRGRVLPIGGLKEKSLAAHRAGYKKILLPK 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N +DL ++P +V +E + M+ VLE A
Sbjct: 739 DNERDLRDIPDSVKNDVEFVPVSHMDQVLEHAL 771
>gi|27380053|ref|NP_771582.1| ATP-dependent protease LA [Bradyrhizobium japonicum USDA 110]
gi|27353207|dbj|BAC50207.1| ATP-dependent protease LA [Bradyrhizobium japonicum USDA 110]
Length = 807
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 340/809 (42%), Positives = 477/809 (58%), Gaps = 89/809 (11%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q ASD + I+ G A L L ++ P G V V++EGL R VQ+ + R
Sbjct: 62 QKNASDDDPAPDAIY--ETGTLASVLQL---LKLPDGTVK--VLVEGLERARVQKYTDRA 114
Query: 90 TYYTARISSLEMT---KIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
YY A +L T +E E + + DF + + K + E++ V++
Sbjct: 115 DYYEATAIALADTDAKSVEAEALARSVVSDFESYVKLNKKISAEVVGVVQA--------- 165
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
KLAD + + ++ +L+++ + RL K L++ + ++V ++I
Sbjct: 166 ----ITDFAKLADTVASHLAVKIADRQGILETLSVTTRLEKVLGLMESEISVLQVEKRIR 221
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELGD DD D+L LE K+ + + Q E
Sbjct: 222 SRVKRQMEKTQREYYLNEQMKAIQKELGD-DDGRDELADLEEKISKTKLSKEAREKAQHE 280
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L++L++M P T R YL+ + +PW K S+ + DL++A+ LDSDHYGL +VK+R
Sbjct: 281 LKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLESAQAILDSDHYGLEKVKER 339
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRG
Sbjct: 340 IVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRG 399
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TFN
Sbjct: 400 HRRTYIGSMPGKIIQSMRKAKSSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTFN 459
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP +
Sbjct: 460 DHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTENEKVEIARKHLIPNAVS 518
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+HGL S+ I + + L+I+RYTREAGVRNLER L+ LAR A +E + K
Sbjct: 519 KHGLDSKEFSIDDDALLLLIRRYTREAGVRNLERELSTLARKAV-------KELMISKKK 571
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP-- 622
V V E LE++LG P
Sbjct: 572 SVK------------------------------------------VTEKSLEELLGVPKY 589
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
RF + E+ +V GI GL WT+ GGE+ +E M GKG++ +TG L DV+KES A
Sbjct: 590 RFGEIESEPQV---GIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISAA 646
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA +V L RDIH+H P GA PKDGPSAGV + TA++S+ + V
Sbjct: 647 ASYVRSRA----IVYGIEPPLFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPV 702
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ +EI
Sbjct: 703 RHDVAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMEI 762
Query: 803 ILAKRMEDVLEQAF-EGGCP--WRQHSKL 828
I R++DV+ +A + P W + +K+
Sbjct: 763 IPVSRLDDVVARALVKKPVPIVWEEDTKV 791
>gi|374576921|ref|ZP_09650017.1| ATP-dependent protease La [Bradyrhizobium sp. WSM471]
gi|374425242|gb|EHR04775.1| ATP-dependent protease La [Bradyrhizobium sp. WSM471]
Length = 801
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 320/764 (41%), Positives = 465/764 (60%), Gaps = 69/764 (9%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ R + P G T+ +V +G+ R + + + ARI + E P+
Sbjct: 91 NIVRYITAPDG--THHIVCQGVQRARILDFLPGTPFPAARIQQIP------EPTTSTPEI 142
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
A + A+E I +L Q + T LAD+ + +I +++ +L+
Sbjct: 143 EARGLNLQRQAIEAIELLPQAPPE--LIAMFQGTTAPGALADLATSFMDIKPQDKQEVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
++DL +R+ K ++ + L+ +R++ +I Q+ + Q+E +LR+QM I+ +LG+ D
Sbjct: 201 TIDLALRVEKVSKHLAERLEVLRISNEIGQQTRASFDERQREAILREQMATIQRQLGEGD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELIADLPWE 294
++ L + A MP H +KELRR ++M P+ G R YL+ + +LPW
Sbjct: 261 GKAAEVAELTAAIAKANMPPEADAHAKKELRRYERM-PEAAGEAGMVRTYLDWLIELPWA 319
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKT 354
+E+ +D+K A+ LD+DH+GL ++K RIIEYLAVRKL P + P+LCFVGPPGVGKT
Sbjct: 320 LPAEK-PIDIKEARRILDADHFGLEKIKSRIIEYLAVRKLAPQGKAPILCFVGPPGVGKT 378
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
SL SIA A+ R F+R+SLGGV DEA+IRGHRRTYIG++PG +I G+K+ G N VM+LD
Sbjct: 379 SLGQSIARAMDRPFVRVSLGGVHDEAEIRGHRRTYIGALPGNIIQGIKKAGARNCVMMLD 438
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
EIDK G V+GDP++A+LEVLDPEQN TF D+YL VPFDLS+V+F+ATAN IP PLL
Sbjct: 439 EIDKMGRGVQGDPSAAMLEVLDPEQNGTFRDNYLGVPFDLSRVVFIATANMLDQIPGPLL 498
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRME+I L GYT EEKL IA R+L+ R L+ +GL +E +I +KLV++ YTREAGVR
Sbjct: 499 DRMELISLTGYTQEEKLEIAKRYLVRRQLEANGLTAEQAEIEPEALKLVVKGYTREAGVR 558
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGE 593
NLER + L R AAV+VAE + + + KD+ LG P + +A
Sbjct: 559 NLEREIGKLFRHAAVQVAEGTAAKVVVTPKDIGTVLGQPRFEGEIA-------------- 604
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
+R + PG++ GL WT GG++ F
Sbjct: 605 -------------------------------------QRTSIPGVATGLAWTPVGGDILF 627
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+EA+ + G+G + LTGQLG+V++ES Q A+T V+++AT L + + L + DIH+H
Sbjct: 628 IEASRVSGRGGMILTGQLGEVMRESVQAAMTLVKSKATQLGIDPQ----LFEKSDIHVHV 683
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
PAGA PKDGPSAGV + TAL SL + + VR+DTAMTGE++LRGLVLPVGG+K+K++AA
Sbjct: 684 PAGATPKDGPSAGVAMFTALTSLLTNRTVRSDTAMTGEISLRGLVLPVGGIKEKVVAAAA 743
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
G+KRV+LP RN +D ++P + +LE I +R+++ + A E
Sbjct: 744 AGLKRVMLPARNKRDYDDIPQSARDNLEFIWLERVDEAIAAALE 787
>gi|367473664|ref|ZP_09473212.1| ATP-dependent protease La [Bradyrhizobium sp. ORS 285]
gi|365274060|emb|CCD85680.1| ATP-dependent protease La [Bradyrhizobium sp. ORS 285]
Length = 807
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 336/795 (42%), Positives = 472/795 (59%), Gaps = 86/795 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + I+ G A L L ++ P G V V++EGL R V++ + R
Sbjct: 61 TQKNASDDDPAPDAIY--ETGTLASVLQL---LKLPDGTVK--VLVEGLERARVEKYTDR 113
Query: 89 GTYYTARISSLEMT---KIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRT 143
YY A +LE T +E E + + DF + + K + E++ V++ G
Sbjct: 114 ADYYEATAVALEDTDAKSVEAEALGRSVVSDFESYVKLNKKISAEVVGVVQSITDFG--- 170
Query: 144 KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
KLAD + + ++ +L+++ + RL K L++ + ++V ++I
Sbjct: 171 ----------KLADTVASHLAVKIADRQGILETLSVTTRLEKVLGLMESEISVLQVEKRI 220
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
+V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D+L LE ++ + + Q
Sbjct: 221 RSRVKRQMEKTQREYYLNEQMKAIQKELGD-EDGRDELADLEERINKTKLSKEAREKAQH 279
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL++L++M P T R YL+ + +PW K S+ + DL+AA+ LD+DHYGL +VK
Sbjct: 280 ELKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLEAAQAVLDADHYGLEKVKD 338
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
RI+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IR
Sbjct: 339 RIVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIR 398
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIGSMPG++I +++ NP+ LLDEIDK GSD RGDP+SALLEVLDPEQN TF
Sbjct: 399 GHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGSDFRGDPSSALLEVLDPEQNTTF 458
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
NDHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EKL IA +HLIP +
Sbjct: 459 NDHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTETEKLEIARKHLIPSAI 517
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+HGL S+ I + + LVI+RYTREAGVRNLER ++ LAR A +E +
Sbjct: 518 SKHGLDSKEWSIDDDALLLVIRRYTREAGVRNLEREISTLARKAV-------KELMMSKK 570
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP- 622
K V +IT E +E+ LG P
Sbjct: 571 KSV------------------------------------KIT------EKTVEEFLGVPK 588
Query: 623 -RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
RF + E+ ++V GI GL WT+ GGE+ +E M GKG++ +TG L DV+KES
Sbjct: 589 YRFGEIESDDQV---GIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA 645
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA + + L RDIH+H P GA PKDGPSAGV + T ++S+ +
Sbjct: 646 AASFVRSRAINYGIEPP----LFDRRDIHVHVPEGATPKDGPSAGVAMATTIISVMTGIP 701
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ +E
Sbjct: 702 VRHDVAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGME 761
Query: 802 IILAKRMEDVLEQAF 816
II R++DV+ +A
Sbjct: 762 IIPVARLDDVVARAL 776
>gi|148255921|ref|YP_001240506.1| ATP-dependent protease La [Bradyrhizobium sp. BTAi1]
gi|146408094|gb|ABQ36600.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Bradyrhizobium sp. BTAi1]
Length = 807
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 329/778 (42%), Positives = 464/778 (59%), Gaps = 84/778 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT--- 102
+ G A L L ++ P G V V++EGL R V++ + R YY A +LE T
Sbjct: 76 YETGTLASVLQL---LKLPDGTVK--VLVEGLERARVEKYTDRADYYEATAVALEDTDAK 130
Query: 103 KIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
+E E + + DF + + K + E++ V++ G KLAD
Sbjct: 131 SVEAEALGRSVVSDFESYVKLNKKISAEVVGVVQSITDFG-------------KLADTVA 177
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ + ++ +L+++ + RL K L++ + ++V ++I +V+ Q+ K+Q+E+ L
Sbjct: 178 SHLAVKIADRQGILETLSVTTRLEKVLGLMESEISVLQVEKRIRSRVKRQMEKTQREYYL 237
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD +D D+L LE ++ + + Q EL++L++M P T
Sbjct: 238 NEQMKAIQKELGD-EDGRDELADLEERINKTKLSKEAREKAQHELKKLRQMSPMSAEATV 296
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW K S+ + DL+AA+ LD+DHYGL +VK RI+EYLAV+ G
Sbjct: 297 VRNYLDWLLSIPWNKKSK-VKKDLEAAQAVLDADHYGLEKVKDRIVEYLAVQSRANKLTG 355
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 356 PILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRTYIGSMPGKIIQS 415
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+++ NP+ LLDEIDK GSD RGDP+SALLEVLDPEQN TFNDHYL V +DLS V+F+
Sbjct: 416 MRKAKTSNPLFLLDEIDKMGSDFRGDPSSALLEVLDPEQNTTFNDHYLEVDYDLSNVMFI 475
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
TAN IP PL+DRME+I + GYT EK+ IA +HLIP L +HGL S+ I + +
Sbjct: 476 TTANTLN-IPGPLMDRMEIIRIAGYTETEKVEIARKHLIPSALSKHGLDSKEWSIDDDAL 534
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
LVI+RYTREAGVRNLER ++ LAR A +E + K V
Sbjct: 535 LLVIRRYTREAGVRNLEREISTLARKAV-------KELMISKKKSVK------------- 574
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAERVAAPGI 638
V E +E+ LG P RF + E ++V GI
Sbjct: 575 -----------------------------VTEKAVEEFLGVPKYRFGEIEQDDQV---GI 602
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
GL WT+ GGE+ +E M GKG++ +TG L DV+KES A ++VR+RA + +
Sbjct: 603 VTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISAAASYVRSRAINYGIEPP 662
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ RDIH+H P GA PKDGPSAGV + TA++S+ + +R D AMTGE+TLRG V
Sbjct: 663 ----MFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPIRHDVAMTGEITLRGRV 718
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ +EII R++DV+ +A
Sbjct: 719 LPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMEIIPVSRLDDVVARAL 776
>gi|194364616|ref|YP_002027226.1| ATP-dependent protease La [Stenotrophomonas maltophilia R551-3]
gi|194347420|gb|ACF50543.1| ATP-dependent protease La [Stenotrophomonas maltophilia R551-3]
Length = 816
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 339/774 (43%), Positives = 472/774 (60%), Gaps = 65/774 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V++EGL R V T+ R SL +E++
Sbjct: 72 GTLAQVLQL---LKLPDG--TIKVLVEGLSRVQV-------THVDERNGSLHGQAVEIDA 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFVASF 163
++ +R+ +A A L+S+ EQ KT + LL+T+ +LAD A
Sbjct: 120 TDERE-----AREVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPARLADTIAAHI 174
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ ++ +L+++ + RL LVD + ++ ++I +V+ Q+ KSQ+E+ L +Q
Sbjct: 175 SVRLSDKQRLLETLAVGDRLEMLVGLVDGEIDVQQMEKRIRGRVKSQMEKSQREYYLNEQ 234
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P R
Sbjct: 235 MKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKARNELNKLKQMSPMSAEAAVVRN 294
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YLE + +PW+K S+ + DLKAA++ LD+DHYGL +VK+RI+EYLAV+ +GP+L
Sbjct: 295 YLEWLLGVPWKKRSK-VRKDLKAAQDTLDADHYGLEKVKERILEYLAVQSRVKQMKGPIL 353
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++ L +
Sbjct: 354 CLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQNLNK 413
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V+FVAT+
Sbjct: 414 VGSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEVMFVATS 473
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PLLDRMEVI +PGYT +EKL IA R+L P+ + +GL E L+I ++ +
Sbjct: 474 NSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLSPKQIKANGLKPEELEIGADAIQDI 532
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
++ YTRE+GVRNLER +A + R ++A L P
Sbjct: 533 VRYYTRESGVRNLEREIAKICRKVVKEIA----------------LAGPQ---------- 566
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
P+ + ++ V L+K LG RFD A E G+ GL
Sbjct: 567 ------PVKAKKGAKKSKALVS----VTGKNLDKYLGVRRFDFGRAEEENEI-GLVTGLA 615
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ +E+T + GKG+L LTGQLG+V+KESA AL+ VR+RA + + +
Sbjct: 616 WTEVGGDLLQIESTLVPGKGQLILTGQLGNVMKESASAALSVVRSRAVGFGIDS----DF 671
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
LQ D+H+H P GA PKDGPSAG +VT+LVS+ ++ VRAD AMTGE+TLRG V +GG
Sbjct: 672 LQKHDVHVHVPDGATPKDGPSAGAAMVTSLVSMLTKVPVRADVAMTGEITLRGRVTAIGG 731
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAA R GI+ VI+PE N KDL ++PA V L+I+ K +E+VL+ A E
Sbjct: 732 LKEKLLAAMRGGIRTVIIPEENRKDLADIPANVTRDLQIVPVKYIEEVLDLALE 785
>gi|414166621|ref|ZP_11422853.1| lon protease [Afipia clevelandensis ATCC 49720]
gi|410892465|gb|EKS40257.1| lon protease [Afipia clevelandensis ATCC 49720]
Length = 808
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 333/794 (41%), Positives = 472/794 (59%), Gaps = 86/794 (10%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q ASD + I+ G A L L ++ P G V V++EGL R + + R
Sbjct: 63 QKNASDDDPAPDSIY--EIGTLASVLQL---LKLPDGTVK--VLVEGLERGKAGKYTDRA 115
Query: 90 TYYTARISSL---EMTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
+Y A +++L + T +E E + + DF + + K + E++ V++Q
Sbjct: 116 EFYEASVTALADLDATSVEAEALSRSVISDFESYVKLNKKISAEVVGVVQQ--------- 166
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
KLAD + + ++ +L+++ + RL K L++ + ++V +KI
Sbjct: 167 ----ITDFAKLADTVASHLAVKISDRQTILETLSVSQRLEKVMGLMESEISVLQVEKKIR 222
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELGD D+ D+L LE K+ + + Q E
Sbjct: 223 SRVKRQMEKTQREYYLNEQMKAIQKELGD-DEGRDELADLEEKINKTKLSKEAREKAQHE 281
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L++L++M P T R YL+ + +PW K S+ + DL AA+E LDSDHYGL +VK R
Sbjct: 282 LKKLRQMSPMSAEATVVRNYLDWLLSIPWGKKSK-VKKDLVAAQEVLDSDHYGLEKVKDR 340
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRG
Sbjct: 341 IVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRG 400
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN+TFN
Sbjct: 401 HRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNQTFN 460
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP +
Sbjct: 461 DHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTENEKVEIARKHLIPAAIA 519
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+HGL S+ I + ++ +I+RYTREAGVRNLER ++ LAR A + L SK
Sbjct: 520 KHGLNSKEWSIDDEALQFLIRRYTREAGVRNLEREISTLARKAV---------KDLMISK 570
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP-- 622
T ++T+ A++E+ LG P
Sbjct: 571 ----------------------------------KKTVKVTA------AVVEEYLGVPKF 590
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
R+ E ++V G+ GL WT GGE+ +E+ M GKG + +TG L DV+KES A
Sbjct: 591 RYGSIETDDQV---GVVTGLAWTEVGGELLTIESVMMPGKGRMTVTGNLRDVMKESISAA 647
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA + + L RDIH+H P GA PKDGPSAGV + T++VS+ + +
Sbjct: 648 ASYVRSRAINYGIEPP----LFDRRDIHVHVPEGATPKDGPSAGVAMTTSIVSVLTGIPI 703
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V +PE N KDL E+ A+ LEI
Sbjct: 704 RHDVAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVFIPEDNAKDLTEISDAIKGGLEI 763
Query: 803 ILAKRMEDVLEQAF 816
I RM++VL +A
Sbjct: 764 IPVSRMDEVLAKAL 777
>gi|270158781|ref|ZP_06187438.1| ATP-dependent protease La [Legionella longbeachae D-4968]
gi|289166419|ref|YP_003456557.1| DNA-binding ATP-dependent protease La [Legionella longbeachae
NSW150]
gi|269990806|gb|EEZ97060.1| ATP-dependent protease La [Legionella longbeachae D-4968]
gi|288859592|emb|CBJ13562.1| DNA-binding ATP-dependent protease La [Legionella longbeachae
NSW150]
Length = 800
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 329/787 (41%), Positives = 467/787 (59%), Gaps = 85/787 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
V R +HLS + +++ G+ + ++E ++ Y+ ARI + + +Q
Sbjct: 87 SVIHRLIHLSDN--------SVQLIVRGIEKICIKEFTSVEPYFKARIELVSEQYTKNKQ 138
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFE 168
+E AL R LIS+ + + L T +L + ASF + +
Sbjct: 139 IE------ALMRNTIELLRHLISL--TPHLSEDLLTLALNTNDPRQLVYLAAASFRLELK 190
Query: 169 --EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRA 226
++L+ LD V+ K L K + R ++ I + +KI + + +L K+++ F+LR+Q++
Sbjct: 191 DAQELLELDKVEDK--LIKLNMFLTREVEIIELGKKIQSQAQNELDKTERYFMLREQLKQ 248
Query: 227 IKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLE 286
IK+ELG+ D+ ++ E K+ A M K EL R+K M Y + YL+
Sbjct: 249 IKKELGEEDEQVLEIREYENKITQAQMSEEAEKVAIHELNRMKTMPTSAAEYQVIKTYLD 308
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDAR-----GP 341
+LPW KA+E+ +LD+ +A+ LD DHY L +VK+RI+E+LAV KL+ + G
Sbjct: 309 WFVELPWNKATED-NLDIDSARRILDEDHYDLKKVKERILEFLAVHKLRLERNDKSYAGS 367
Query: 342 VLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 401
+LCF+GPPGVGKTSL SIA ALGRKFIR SLGGV DE +IRGHRRTYIG++PGR+I +
Sbjct: 368 ILCFIGPPGVGKTSLGQSIARALGRKFIRFSLGGVHDEGEIRGHRRTYIGALPGRIIQSI 427
Query: 402 KRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVA 461
KRV CNPVM+LDEIDK G+D RGDP+SALLEVLDP QNKTF+DHYL+V FDLS+VIF+
Sbjct: 428 KRVESCNPVMILDEIDKVGADFRGDPSSALLEVLDPAQNKTFSDHYLDVDFDLSQVIFIC 487
Query: 462 TANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVK 521
TAN+ PI P L DRME+I LPGYT +EKL IA+ +LIPR + ++GL E +Q +
Sbjct: 488 TANQIDPIQPALRDRMEIITLPGYTDDEKLHIAINYLIPRQIKENGLIPEEIQFEHNAIL 547
Query: 522 LVIQRYTREAGVRNLERNLAALARAAAVKVAEQE-QEQALPSSKDVHRLGSPLLDNRLAD 580
L+ YTREAGVRNLER + A+ R A +AE++ + + K + LG P + +A
Sbjct: 548 LMSHDYTREAGVRNLEREIGAICRKVATLIAEKKVKSTTITQDKVIELLGKPKYYSEIA- 606
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
ER PG+++
Sbjct: 607 --------------------------------------------------ERTTIPGVAI 616
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL T GG++ F+EAT M G +TGQLG ++KESAQ AL++VRA+A QL +D
Sbjct: 617 GLAVTVGGGDILFIEATKMPGAKVFTVTGQLGTMMKESAQAALSYVRAKAH--QLGIKD- 673
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + DIH+H P GA+PKDGPSAGVT+ TAL SL + + +++D MTGE+TLRG VLP
Sbjct: 674 -KVFEKCDIHLHIPEGAIPKDGPSAGVTMATALASLMTNRLIKSDVGMTGEITLRGRVLP 732
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGC 820
VGG+K+K+LAAHR G+K VILP+RN KDL ++P V ++ I AK + +V + A C
Sbjct: 733 VGGIKEKVLAAHRAGLKTVILPKRNDKDLEDLPDKVHKEMKFIFAKNVSEVFDAAL---C 789
Query: 821 PWRQHSK 827
P ++ +
Sbjct: 790 PANKNDE 796
>gi|398798174|ref|ZP_10557475.1| ATP-dependent protease La [Pantoea sp. GM01]
gi|398100891|gb|EJL91119.1| ATP-dependent protease La [Pantoea sp. GM01]
Length = 784
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 326/767 (42%), Positives = 465/767 (60%), Gaps = 82/767 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + L+ G ++ A+ L +IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRAHITTLADNGDHFVAQAEYLVSPEIEEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTVAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP+ + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYEALKRKIEAAKMPTEAREKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-V 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRKAQETLDIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKDKEITVDDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A ++ + M +S
Sbjct: 544 LERELSKLCRKA--------------------------------------VKTLLMDKSK 565
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
+ V++ L+ LG RF D AE + G GL WT GG++ +E
Sbjct: 566 KHI----------VINGDNLKDFLGVQRF-DYGRAESESRVGQVTGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H P
Sbjct: 615 TACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINA----DFYEKRDIHVHVPE 670
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAG+ + TALVS + VR+D AMTGE+TLRGLVLP+GG+K+K+LAAHR G
Sbjct: 671 GATPKDGPSAGIAMCTALVSCLTGNPVRSDVAMTGEITLRGLVLPIGGLKEKLLAAHRGG 730
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
IK V++P+ N +DL ++P V+A LEI KR+E+VL A E P+
Sbjct: 731 IKTVLIPDENKRDLEDIPQNVIADLEIHPVKRIEEVLNLALE-NAPY 776
>gi|150396097|ref|YP_001326564.1| ATP-dependent protease La [Sinorhizobium medicae WSM419]
gi|150027612|gb|ABR59729.1| ATP-dependent protease La [Sinorhizobium medicae WSM419]
Length = 806
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 325/789 (41%), Positives = 459/789 (58%), Gaps = 73/789 (9%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ A+D + I+ G A L L ++ P G V V++EG R ++ + R
Sbjct: 57 TQINATDDDPEPSAIY--KVGTIANVLQL---LKLPDGTVK--VLVEGRSRAEIERYTPR 109
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT-KVLL 147
+Y A +L E D D + + ++ E S ++ +K V
Sbjct: 110 DDFYEAMAHALP---------EPDEDPVEIEALSRSVVSEFESYVKLNKKISPEVVGVAS 160
Query: 148 ETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKV 207
+ KLAD + I E+ ML++ +K+RL KA ++ + ++V ++I +V
Sbjct: 161 QIEDYSKLADTVASHLSIKIVEKQEMLETTSVKMRLEKALGFMEGEISVLQVEKRIRSRV 220
Query: 208 EGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
+ Q+ K+Q+E+ L +QM+AI++ELGD++D D++ LE ++ + + EL++
Sbjct: 221 KRQMEKTQREYYLNEQMKAIQKELGDSEDGRDEMAELEERISKTKLSKEAREKADAELKK 280
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
L++M P T R YL+ + LPW K S+ I DL A++ LD+DH+GL +VK+RI+E
Sbjct: 281 LRQMSPMSAEATVVRNYLDWLLGLPWGKKSK-IKTDLNHAEKVLDTDHFGLDKVKERIVE 339
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAV+ +GP+LC VGPPGVGKTSLA SIA A GR++IR++LGGV+DEA+IRGHRR
Sbjct: 340 YLAVQARSSKIKGPILCLVGPPGVGKTSLAKSIAKATGREYIRMALGGVRDEAEIRGHRR 399
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN TF DHY
Sbjct: 400 TYIGSMPGKVVQSMKKAKKSNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNSTFMDHY 459
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
L V +DLS V+F+ TAN IPPPL+DRMEVI + GYT EEKL IA RHL+P+ + H
Sbjct: 460 LEVEYDLSNVMFITTANTLN-IPPPLMDRMEVIRIAGYTEEEKLEIAKRHLLPKAIRDHA 518
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + + + + +IQ YTREAGVRN ER L LAR A ++ + + ++ S+++++
Sbjct: 519 LQTNEFSVTDGALTAIIQNYTREAGVRNFERELMKLARKAVTEILKGKTKKVEVSAENIN 578
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDR 627
LG PRF
Sbjct: 579 -------------------------------------------------DYLGVPRFRHG 589
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E AER G+ GL WT GGE+ +E M GKG + +TG L DV+KES A ++VR
Sbjct: 590 E-AERDDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYVR 648
Query: 688 ARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTA 747
+RA D + L RDIH+H P GA PKDGPSAGV + TA+VS+ + + D A
Sbjct: 649 SRAIDFGIEPP----LFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVMTGIPISKDVA 704
Query: 748 MTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKR 807
MTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL ++P V SLEII R
Sbjct: 705 MTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPDNVKNSLEIIPVSR 764
Query: 808 MEDVLEQAF 816
M +V+ A
Sbjct: 765 MGEVIAHAL 773
>gi|375009748|ref|YP_004983381.1| ATP-dependent protease La [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288597|gb|AEV20281.1| ATP-dependent protease La [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 780
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 322/786 (40%), Positives = 477/786 (60%), Gaps = 85/786 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G AR L ++ P+G T+ V++EG+ R + E+ + Y+ +
Sbjct: 73 YKMGTIARVKQL---LKLPNG--TFRVLVEGVARALITEVISEEPYFLVK---------- 117
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-----LLETVPIHKLADIFV 160
VE+ D A + +A ++ EQ R V +++ ++ADI
Sbjct: 118 ---VEKFADRAAKDLEDEALKRTMLEYFEQYINLSKRLSVDIYASIVDIDEPGRMADIIA 174
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ + EE+ +L+++D+K RL+K +++ + +++ +KI+ +V+ + ++QKE+ L
Sbjct: 175 SHLPLKLEEKQRILETIDVKERLNKIIQILHNEKEVLQLEKKISARVKQSMERTQKEYYL 234
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
R+QM+AI++ELG+ + ++ L+ K+++AGMP ++ + KEL R +K+
Sbjct: 235 REQMKAIQKELGEKEGKTGEVEELKEKIEAAGMPEHVKQTALKELDRYEKIPATSAESAV 294
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + LPW K +E+I D+K A+ L+ +HYGL +VK+R++E+L+V++L +G
Sbjct: 295 IRNYLDWLIALPWSKETEDIH-DIKRAEAILNEEHYGLDKVKERVLEFLSVKQLTKSLKG 353
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC GPPGVGKTSLA SIA ALGR+F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G
Sbjct: 354 PILCLAGPPGVGKTSLARSIAKALGRRFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQG 413
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+K+ G NPV LLDEIDK SD RGDP++A+LEVLDPEQN TF+DHY+ P+DLSKV+F+
Sbjct: 414 MKKAGTINPVFLLDEIDKMSSDFRGDPSAAMLEVLDPEQNHTFSDHYIEEPYDLSKVMFI 473
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
ATAN IP PLLDRMEVI +PGYT EKL IA RHL+P+ + +HGL LQI + +
Sbjct: 474 ATANHLAAIPQPLLDRMEVIHIPGYTEVEKLHIAKRHLLPKQITEHGLKKAALQIRDDAM 533
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR LER LAA+ R AA + E+++
Sbjct: 534 LDIIRHYTREAGVRELERQLAAICRKAARLIVSGEKKR---------------------- 571
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLG--PPRFDDREAAERVAAPGI 638
+V+ E LE+ LG R+ EA ++V G+
Sbjct: 572 ---------------------------VVITENNLEEFLGKRKYRYGRAEAEDQV---GV 601
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
+ GL +T FGG+ +E + G G+L LTG+LGDV+KESAQ A ++VR+RA +L +
Sbjct: 602 ATGLAYTAFGGDTLAIEVSLAPGNGKLVLTGKLGDVMKESAQAAFSYVRSRAEELGI--- 658
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ DIHIH P GAVPKDGPSAG+T+ TAL+S + K V MTGE+TLRG V
Sbjct: 659 -DPKFHETYDIHIHVPEGAVPKDGPSAGITIATALISALTGKPVSRFVGMTGEITLRGRV 717
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
L +GG+K+K L+AHR G+K VILP+ N KDL ++P V L +L +++VL A G
Sbjct: 718 LAIGGLKEKTLSAHRAGLKTVILPKDNEKDLADIPETVKRDLRFVLVSHLDEVLPHALVG 777
Query: 819 GCPWRQ 824
W++
Sbjct: 778 ---WKR 780
>gi|403237693|ref|ZP_10916279.1| LonA [Bacillus sp. 10403023]
Length = 770
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 305/766 (39%), Positives = 476/766 (62%), Gaps = 91/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-----------MTKIEMEQVEQD 112
P+G T V++EGL R ++++ TY++ ++ + E + ++ +E EQ
Sbjct: 82 PNG--TIRVLVEGLHRAEIKDIYDNDTYFSVKVKTFEEDETKDVETEALMRMMLESFEQ- 138
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I LS++ A ++ +E+ GR +ADI + + +E+
Sbjct: 139 --YIKLSKKISAETYTSVTDIEEP----GR------------MADIIASHIPLKLKEKQE 180
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L+++D++VR++K +++ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELG
Sbjct: 181 ILETIDVRVRMNKVITIINNEKEVLSLEKKIGQRVKRSMERTQKEYYLREQMKAIQKELG 240
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELIADL 291
+ + ++ L+ K+++AGMP ++ KEL R +K+ PQ ++ R Y+E + L
Sbjct: 241 EKEGKAGEVTTLKEKIENAGMPEHVKDVALKELDRYEKI-PQTSAESAVIRNYIEWLLSL 299
Query: 292 PWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGV 351
PW A+E+ LD+ A+E L+ DH+GL +VK+R++EYLAV++L +GP+LC GPPGV
Sbjct: 300 PWTNATED-RLDIHRAEEILEKDHFGLEKVKERVLEYLAVQQLTNSLKGPILCLAGPPGV 358
Query: 352 GKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVM 411
GKTSLA S+A +LGR F+RISLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV
Sbjct: 359 GKTSLAKSVAKSLGRNFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGTINPVF 418
Query: 412 LLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPP 471
LLDEIDK SD RGDP++A+LEVLDPEQN F+DH++ P+DLSKV+F+ATAN IP
Sbjct: 419 LLDEIDKMSSDFRGDPSAAMLEVLDPEQNSNFSDHFIEEPYDLSKVMFIATANNLATIPG 478
Query: 472 PLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREA 531
PL DRME+I + GYT EK+ IA HL+P+ L++HGL LQ+ E + VI+ YTREA
Sbjct: 479 PLRDRMEIITIAGYTELEKVNIAKDHLLPKQLEEHGLTKGKLQMREDALLSVIRHYTREA 538
Query: 532 GVRNLERNLAALARAAAVKVAEQEQEQALPSSKDV-HRLGSPLLDNRLADGAEVEMEVIP 590
GVR LER +A + R A + E+++ + + K+V LG P+
Sbjct: 539 GVRGLERQIAKICRKVAKIIVSGEKKRVVITDKNVIEFLGKPIF---------------- 582
Query: 591 MGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGE 650
R+ E +++ G++ GL +T FGG+
Sbjct: 583 --------------------------------RYGQAEIEDQI---GVATGLAYTVFGGD 607
Query: 651 VQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIH 710
+E + GKG+L LTG+LGDV+KESAQ A +++R++A +L++ + + DIH
Sbjct: 608 TLSIEVSLAPGKGKLVLTGKLGDVMKESAQAAFSYIRSKAEELKI----DPDFYEKNDIH 663
Query: 711 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILA 770
IH P GAVPKDGPSAG+T+ TAL+S + + VR + MTGE+TLRG VLP+GG+K+K L+
Sbjct: 664 IHVPEGAVPKDGPSAGITIATALISALTGRAVRKEVGMTGEITLRGRVLPIGGLKEKSLS 723
Query: 771 AHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
AHR G+ +++ P+ N KDL ++P +V +E + +++VL+ A
Sbjct: 724 AHRAGLTKILFPKENEKDLEDIPESVREDVEFVPVSHLDEVLKHAL 769
>gi|386401186|ref|ZP_10085964.1| ATP-dependent protease La [Bradyrhizobium sp. WSM1253]
gi|385741812|gb|EIG62008.1| ATP-dependent protease La [Bradyrhizobium sp. WSM1253]
Length = 801
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 319/764 (41%), Positives = 465/764 (60%), Gaps = 69/764 (9%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ R + P G T+ +V +G+ R + + + ARI + E P+
Sbjct: 91 NIVRYITAPDG--THHIVCQGVQRARILDFLPGTPFPAARIQQIP------EPTTSSPEI 142
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
A + + A+E I +L Q + T LAD+ + +I +++ +L+
Sbjct: 143 EARALNLQRQAIEAIELLPQAPPE--LVAMFQGTTAPGALADLATSFMDIKPQDKQEVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
++DL +R+ K ++ + L+ +R++ +I Q+ + Q+E +LR+QM I+ +LG+ D
Sbjct: 201 TIDLALRVEKVSKHLAERLEVLRISNEIGQQTRASFDERQREAILREQMATIQRQLGEGD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELIADLPWE 294
++ L + A MP H +KELRR ++M P+ G R YL+ + +LPW
Sbjct: 261 GKAAEVAELTAAIAKANMPPEADAHAKKELRRYERM-PEAAGEAGMVRTYLDWLIELPWA 319
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKT 354
+E+ +D+K A+ LD+DH+GL ++K RIIEYLAVRKL P + P+LCFVGPPGVGKT
Sbjct: 320 LPAEK-PIDIKEARRILDADHFGLEKIKSRIIEYLAVRKLAPQGKAPILCFVGPPGVGKT 378
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
SL SIA A+ R F+R+SLGGV DEA+IRGHRRTYIG++PG +I G+K+ G N VM+LD
Sbjct: 379 SLGQSIARAMDRPFVRVSLGGVHDEAEIRGHRRTYIGALPGNIIQGIKKAGTRNCVMMLD 438
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
EIDK G V+GDP++A+LEVLDPEQN TF D+YL VPFDLS+V+F+ATAN IP PLL
Sbjct: 439 EIDKMGRGVQGDPSAAMLEVLDPEQNGTFRDNYLGVPFDLSRVVFIATANMLDQIPGPLL 498
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRME+I L GYT EEKL IA R+L+ R L+ +GL +E +I ++LV+ YTREAGVR
Sbjct: 499 DRMELISLTGYTQEEKLEIAKRYLVRRQLEANGLTAEQAEIEPEALELVVNGYTREAGVR 558
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGE 593
NLER + L R AAV+VAE + + + KD+ LG P + +A
Sbjct: 559 NLEREIGKLFRHAAVQVAEGTAAKVVVTPKDIGTVLGQPRFEGEIA-------------- 604
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
+R + PG++ GL WT GG++ F
Sbjct: 605 -------------------------------------QRTSIPGVATGLAWTPVGGDILF 627
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+EA+ + G+G + LTGQLG+V++ES Q A+T V+++AT L + + L + DIH+H
Sbjct: 628 IEASRVSGRGGMILTGQLGEVMRESVQAAMTLVKSKATQLGIDPQ----LFEKSDIHVHV 683
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
PAGA PKDGPSAGV + TAL SL + + VR+DTAMTGE++LRGLVLPVGG+K+K++AA
Sbjct: 684 PAGATPKDGPSAGVAMFTALTSLLTNRTVRSDTAMTGEISLRGLVLPVGGIKEKVVAAAA 743
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
G+KRV+LP RN +D ++P + +LE I +R+++ + A E
Sbjct: 744 AGLKRVMLPARNKRDYDDIPKSARDNLEFIWLERVDEAIAAALE 787
>gi|423683282|ref|ZP_17658121.1| class III heat-shock ATP-dependent Lon protease [Bacillus
licheniformis WX-02]
gi|383440056|gb|EID47831.1| class III heat-shock ATP-dependent Lon protease [Bacillus
licheniformis WX-02]
Length = 774
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 320/755 (42%), Positives = 460/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R + E Y + +I ++ E+ E+D + AL R
Sbjct: 82 PNG--TIRVLVEGLQRARILEYHDLDEYTSVKIERID------EETEKDVEDEALVRTLL 133
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I + K+ + + + ++ADI + + +++ +L+++D+K RL
Sbjct: 134 DHFDQYIKI--SKKISAETFAAVTDIEEPGRMADIVASHLPLKLKDKQEVLETIDVKARL 191
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
+K +L+ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELGD + ++
Sbjct: 192 NKVIDLIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELGDKEGKTGEVQK 251
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ AGMP N+ + KEL R +K+ + R Y+E + LPW A+E+ LD
Sbjct: 252 LTEKIEQAGMPDNVKETALKELNRYEKIPSSSAESSVIRNYIEWLISLPWNDATED-RLD 310
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
LK A + LD +H+GL +VK+R++EYLAV+KL +GP+LC GPPGVGKTSLA SIA +
Sbjct: 311 LKLASQILDEEHHGLEKVKERVLEYLAVQKLTRSLKGPILCLAGPPGVGKTSLAKSIAKS 370
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
LGRKF+RISLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV LLDEIDK SD
Sbjct: 371 LGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKNNPVFLLDEIDKMASDF 430
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDPASA+LEVLDPEQN TF+DHY+ FDLSKV+F+ATAN IP PL DRME+I +
Sbjct: 431 RGDPASAMLEVLDPEQNHTFSDHYIEETFDLSKVLFIATANNLATIPGPLRDRMEIITIA 490
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ I HL+P+ L +HGL LQI E V VI+ YTREAGVRNLER +AA+
Sbjct: 491 GYTEVEKVEIVKDHLLPKQLKEHGLKKSNLQIREQAVLAVIRYYTREAGVRNLERQIAAI 550
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + K++ L R+ FR
Sbjct: 551 CRKAAKLIVSGERKRITVTDKNL----EDYLGKRM-----------------------FR 583
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
G DD+ G+ GL +T GG+ +E + GKG
Sbjct: 584 ---------------YGQAELDDQ--------IGVVTGLAYTTVGGDTLSIEVSLSPGKG 620
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV++ESAQ A ++VR++A +L + + + DIHIH P GAVPKDGP
Sbjct: 621 KLILTGKLGDVMRESAQAAFSYVRSKAEELNISP----DFHEKHDIHIHVPEGAVPKDGP 676
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TALVS + + V + MTGE+TLRG VLP+GG+K+K L AHR G+K VI+P+
Sbjct: 677 SAGITMATALVSALTGRPVSRNVGMTGEITLRGRVLPIGGLKEKALGAHRAGLKTVIMPK 736
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KD+ ++P +V L I +++VL+ A G
Sbjct: 737 DNEKDIEDIPNSVREGLTFIPVAHLDEVLKHALVG 771
>gi|378977302|ref|YP_005225443.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|421908675|ref|ZP_16338510.1| ATP-dependent protease La [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421918685|ref|ZP_16348200.1| ATP-dependent protease La [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|428149081|ref|ZP_18996913.1| ATP-dependent protease La Type I [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|364516712|gb|AEW59840.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|410117466|emb|CCM81135.1| ATP-dependent protease La [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410118952|emb|CCM90825.1| ATP-dependent protease La [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|427540938|emb|CCM93051.1| ATP-dependent protease La Type I [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 741
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 331/765 (43%), Positives = 465/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 41 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 98
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 99 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 142
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 143 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 202
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 203 DAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 261
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 262 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 321
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 322 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 381
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 382 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 440
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 441 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 500
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ GE+
Sbjct: 501 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GENL 532
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 533 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 569
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VR+RA L + A + + RDIH+H
Sbjct: 570 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRSRADKLGINA----DFYEKRDIHVHV 625
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 626 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 685
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 686 GGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 730
>gi|52081303|ref|YP_080094.1| class III heat-shock ATP-dependent Lon protease [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319647216|ref|ZP_08001438.1| LonA protein [Bacillus sp. BT1B_CT2]
gi|404490182|ref|YP_006714288.1| class 3 heat-shock ATP-dependent protease LonA [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52004514|gb|AAU24456.1| class III heat-shock ATP-dependent Lon protease [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52349184|gb|AAU41818.1| class 3 heat-shock ATP-dependent protease LonA [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317390563|gb|EFV71368.1| LonA protein [Bacillus sp. BT1B_CT2]
Length = 774
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 320/755 (42%), Positives = 460/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R + E Y + +I ++ E+ E+D + AL R
Sbjct: 82 PNG--TIRVLVEGLQRARILEYHDLDEYTSVKIERID------EETEKDVEDEALMRTLL 133
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I + K+ + + + ++ADI + + +++ +L+++D+K RL
Sbjct: 134 DHFDQYIKI--SKKISAETFAAVTDIEEPGRMADIVASHLPLKLKDKQEVLETIDVKARL 191
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
+K +L+ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELGD + ++
Sbjct: 192 NKVIDLIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELGDKEGKTGEVQK 251
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ AGMP N+ + KEL R +K+ + R Y+E + LPW A+E+ LD
Sbjct: 252 LTEKIEQAGMPDNVKETALKELNRYEKIPSSSAESSVIRNYIEWLISLPWNDATED-RLD 310
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
LK A + LD +H+GL +VK+R++EYLAV+KL +GP+LC GPPGVGKTSLA SIA +
Sbjct: 311 LKLASQILDEEHHGLEKVKERVLEYLAVQKLTRSLKGPILCLAGPPGVGKTSLAKSIAKS 370
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
LGRKF+RISLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV LLDEIDK SD
Sbjct: 371 LGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKNNPVFLLDEIDKMASDF 430
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDPASA+LEVLDPEQN TF+DHY+ FDLSKV+F+ATAN IP PL DRME+I +
Sbjct: 431 RGDPASAMLEVLDPEQNHTFSDHYIEETFDLSKVLFIATANNLATIPGPLRDRMEIITIA 490
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ I HL+P+ L +HGL LQI E V VI+ YTREAGVRNLER +AA+
Sbjct: 491 GYTEVEKVEIVKDHLLPKQLKEHGLKKSNLQIREQAVLDVIRYYTREAGVRNLERQIAAI 550
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + K++ L R+ FR
Sbjct: 551 CRKAAKLIVSGERKRITVTDKNL----EDYLGKRM-----------------------FR 583
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
G DD+ G+ GL +T GG+ +E + GKG
Sbjct: 584 ---------------YGQAELDDQ--------IGVVTGLAYTTVGGDTLSIEVSLSPGKG 620
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV++ESAQ A ++VR++A +L + + + DIHIH P GAVPKDGP
Sbjct: 621 KLILTGKLGDVMRESAQAAFSYVRSKAEELNISP----DFHEKHDIHIHVPEGAVPKDGP 676
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TALVS + + V + MTGE+TLRG VLP+GG+K+K L AHR G+K VI+P+
Sbjct: 677 SAGITMATALVSALTGRPVSRNVGMTGEITLRGRVLPIGGLKEKALGAHRAGLKTVIMPK 736
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KD+ ++P +V L I +++VL+ A G
Sbjct: 737 DNEKDIEDIPNSVREGLTFIPVAHLDEVLKHALVG 771
>gi|352085688|ref|ZP_08953279.1| ATP-dependent protease La [Rhodanobacter sp. 2APBS1]
gi|389798004|ref|ZP_10201032.1| ATP-dependent serine proteinase La [Rhodanobacter sp. 116-2]
gi|351681629|gb|EHA64753.1| ATP-dependent protease La [Rhodanobacter sp. 2APBS1]
gi|388445899|gb|EIM01952.1| ATP-dependent serine proteinase La [Rhodanobacter sp. 116-2]
Length = 824
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 341/784 (43%), Positives = 474/784 (60%), Gaps = 61/784 (7%)
Query: 41 EVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE 100
E+ H G A L L ++ P G V V++EG R SV+ TAR +E
Sbjct: 67 EITDLHQVGTLAGVLQL---LKLPDGTVK--VLVEGQSRVSVEGFKEEDGMLTARSRVIE 121
Query: 101 MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQ--KQKTGGRTKVLLETVPI---HKL 155
P + A R+ + LIS+ EQ KQ +VL I ++
Sbjct: 122 ------------PVYNAKERELDVVSRTLISLFEQLVKQSRKLPPEVLASLSGIDDPSRV 169
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
AD A + ++ +L++ D+ RL LVD + +V ++I +V+ Q+ KSQ
Sbjct: 170 ADSIAAHLSVRMADKQKVLETADVGQRLELLIGLVDGEMDLQQVEKRIRGRVKSQMEKSQ 229
Query: 216 KEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQ 275
+E+ L +QM+AI++ELGD +D +++ L++K++ +GMP + ++E +LK+M P
Sbjct: 230 REYYLNEQMKAIQKELGDGEDGPNEIEELQKKIEGSGMPKAVLAKARQEFGKLKQMSPMS 289
Query: 276 PGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK 335
T R YL+ + +PW+K S+ + DL+ A+E LD+DH+GL +VK RI+EYLAV++
Sbjct: 290 AEATVVRNYLDWLVGVPWKKRSK-VRKDLQLAQEVLDADHFGLEKVKDRILEYLAVQQRV 348
Query: 336 PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPG 395
+GP+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTYIGSMPG
Sbjct: 349 SVMKGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYIGSMPG 408
Query: 396 RLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 455
R++ + +VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS
Sbjct: 409 RIVQNINKVGTKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNHAFNDHYLEVDLDLS 468
Query: 456 KVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI 515
+V+++ATAN IP PLLDRMEVI +PGYT +EKL IA ++L+ + L +GL E L +
Sbjct: 469 EVMWIATANSLN-IPGPLLDRMEVIRIPGYTEDEKLGIAQKYLLSKQLKANGLKPEELSV 527
Query: 516 PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLD 575
E ++ +++ YTRE+GVRNLER ++ + R +E L K SP
Sbjct: 528 TEDALRDIVRYYTRESGVRNLEREISKICRKVV-------KELTLGQVKKARAKASP--- 577
Query: 576 NRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERV 633
A + + P + VD + L++ LG RFD +E V
Sbjct: 578 ---AKATKGRAKASP---------------DRIKVDSSNLDQYLGVRRFDFGRKELQNEV 619
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL WT GGE+ +EA+ + GKG L TGQLGDV+KES Q AL+ VRARA L
Sbjct: 620 ---GLVTGLAWTQVGGELLSIEASVVAGKGRLVHTGQLGDVMKESIQAALSVVRARADQL 676
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ E Q D+HIH P GA PKDGPSAG+ + TALVS +R VR++ AMTGE+T
Sbjct: 677 GIDPE----FHQKLDVHIHVPEGATPKDGPSAGIGMCTALVSALTRVPVRSEVAMTGEIT 732
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAAHR GI VI+PE N KDLV++PA + +SLEI + +++VL+
Sbjct: 733 LRGRVLPIGGLKEKLLAAHRGGITTVIIPEDNKKDLVDMPANITSSLEIHPVRWIDEVLD 792
Query: 814 QAFE 817
A E
Sbjct: 793 IALE 796
>gi|242240290|ref|YP_002988471.1| DNA-binding ATP-dependent protease La [Dickeya dadantii Ech703]
gi|242132347|gb|ACS86649.1| ATP-dependent protease La [Dickeya dadantii Ech703]
Length = 786
Score = 577 bits (1487), Expect = e-161, Method: Compositional matrix adjust.
Identities = 331/764 (43%), Positives = 462/764 (60%), Gaps = 85/764 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ L+ IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLDSPAIEEREQEVLMRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVTERLEYLMAMMESEIDLLQVEKRIRSRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++L+ M P T R Y++ + +PW
Sbjct: 246 DAPDEQEALKRKVDAANMPKEAREKAEAELQKLRMMSPMSAEATVVRSYIDWMVQVPWH- 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LDSDHYGL RVK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLVKAQEMLDSDHYGLERVKERILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIARQHLLPKQIERNALKKGELTVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + S L+D + G T
Sbjct: 544 LEREISKLCRKA---------------------VKSLLMDKTI-------------GHIT 569
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAE--RVAAPGISVGLVWTNFGGEVQF 653
N L++ LG RFD A E RV G GL WT GG++
Sbjct: 570 ITGDN--------------LKEYLGVQRFDYGRADEENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAETLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GIK V++PE N +DL ++P V+A L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPEENKRDLEDIPQNVIADLDIHPVKRIEEVLALALQ 772
>gi|89098930|ref|ZP_01171810.1| LonA [Bacillus sp. NRRL B-14911]
gi|89086334|gb|EAR65455.1| LonA [Bacillus sp. NRRL B-14911]
Length = 811
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 308/766 (40%), Positives = 464/766 (60%), Gaps = 87/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-----------MTKIEMEQVEQD 112
P+G + V++EGL R + EL+ G +YT + + + + + +E EQ
Sbjct: 115 PNGTIR--VLVEGLKRAEITELTDEGDHYTVSVETYDDREDKDAEDQALMRTMLEYFEQ- 171
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I +S++ A +S +E+ GR +ADI + + +E+
Sbjct: 172 --YIKVSKKISAETYSSVSDIEEP----GR------------MADIVASHLPLKLKEKQD 213
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L+ +D+K RL++ E++ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELG
Sbjct: 214 ILEMIDVKKRLNQVIEIIHNEKEVLNLEKKIGQRVKKSMERTQKEYYLREQMKAIQKELG 273
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D + ++ L +++ +GMP ++ KEL R +K+ R Y++ + LP
Sbjct: 274 DKEGKTGEIAELNDRIEQSGMPDHVKLAALKELDRYEKVPSSSAESAVIRNYIDWLVSLP 333
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W +A+ + DL++ A+ L+ DHYGL +VK+R++EYLAV+KL +GP+LC GPPGVG
Sbjct: 334 WTEATVD-DLNIHNAERILNRDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLAGPPGVG 392
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSLA SIA++L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV L
Sbjct: 393 KTSLAKSIAASLNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAETINPVFL 452
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK +D RGDP+SA+LEVLDPEQN F+DHY+ +DLSKV+F+ATAN IP P
Sbjct: 453 LDEIDKMSNDFRGDPSSAMLEVLDPEQNHNFSDHYIEETYDLSKVMFIATANNLATIPGP 512
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DRME+I + GYT EK+ IA HL+P+ +HGL LQI E ++ +++ YTREAG
Sbjct: 513 LRDRMEIITIAGYTELEKIHIAKDHLLPKQTSEHGLSKSQLQIREDGIQKIVRYYTREAG 572
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VR LER LA++ R A + E+++ + S K++
Sbjct: 573 VRGLERQLASICRKTAKIIVSGEKKKVIISEKNI-------------------------- 606
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
E LG P+F + AE G++ GL +T GG+
Sbjct: 607 -----------------------EDFLGKPKFRYGQ-AEVEDQIGVATGLAYTTVGGDTL 642
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
+E + GKG+L LTG+LGDV+KESAQ A ++VR++A +L + A + + DIHIH
Sbjct: 643 QIEVSLSPGKGKLVLTGKLGDVMKESAQTAFSYVRSKAKELGIEA----DFYEKYDIHIH 698
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
P GAVPKDGPSAG+T+ TALVS S +R + MTGE+TLRG VLP+GGVK+K L+AH
Sbjct: 699 VPEGAVPKDGPSAGITITTALVSALSGNPIRKEVGMTGEITLRGRVLPIGGVKEKTLSAH 758
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
R G+ ++ILP+ N KD+ ++P +V L+ +L +++VL+ A G
Sbjct: 759 RAGLTKIILPKDNEKDIDDIPESVRDELDFVLVSHVDEVLKHALNG 804
>gi|322421145|ref|YP_004200368.1| ATP-dependent protease La [Geobacter sp. M18]
gi|320127532|gb|ADW15092.1| ATP-dependent protease La [Geobacter sp. M18]
Length = 772
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 299/664 (45%), Positives = 424/664 (63%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+L+D+ + +E +L+++D RL K + +Q +++ ++ +V ++ K
Sbjct: 164 RLSDLVALYLNLPIDELQKLLETIDPLDRLKKVYMHLTNEVQRLQIKGEVQAEVTKKVGK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQKEFLLR+QM+ I+EELG+ D + L K++SA MP ++ K +KE+RRL+++ P
Sbjct: 224 SQKEFLLREQMKQIQEELGEEDSRMGETNELRTKIESAKMPDDVRKIAEKEMRRLERINP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
P YT SR YL+ + +PW+ ++ + + D+ A+ L+ DHY L +VK+RI+EYLAVR
Sbjct: 284 ASPEYTVSRTYLDYLTTIPWQTSTPD-NKDINQAEVVLNEDHYDLKKVKERILEYLAVRA 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
LK +GP+LCFVGPPGVGKTSL SIA LGRKFIRISLGG++DEA+IRGHRRTYIG++
Sbjct: 343 LKDKMKGPILCFVGPPGVGKTSLGKSIARTLGRKFIRISLGGMRDEAEIRGHRRTYIGAL 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I + R G NPV +LDE+DK G+D RGDPASALLEVLDPEQN +F DHYL+VPFD
Sbjct: 403 PGRIIQEINRAGSNNPVFMLDEVDKIGADFRGDPASALLEVLDPEQNFSFTDHYLDVPFD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
L+ V+F+ TAN+ PIP PL DRMEVI L GYT EEKL IA ++LI R ++++GL
Sbjct: 463 LTNVMFITTANQLDPIPAPLKDRMEVITLSGYTDEEKLNIAKKYLIAREVEENGLAKMAP 522
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ + + V YTREAGVRNL+R++A++ R A +VA+++ + L + V L
Sbjct: 523 EFTDEAIYRVTHDYTREAGVRNLQRSIASICRKIAKEVAQEKPLRTLVDPETVAEL---- 578
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LGPP+F D A+E+
Sbjct: 579 ---------------------------------------------LGPPKFFDEVASEKD 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G++ GL WT GG++ FVEAT M+GK +L LTG LG+V++ESA+ AL++V+A +L
Sbjct: 594 RI-GVATGLAWTESGGDIIFVEATKMKGKEDLILTGSLGEVMRESARAALSFVKANCAEL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ + +HIH PAG++PKDGPSAG+T+ T +VSLFS + R D AMTGEM+
Sbjct: 653 GIEKK----AFDDTTLHIHVPAGSIPKDGPSAGITMATTIVSLFSGRPARRDVAMTGEMS 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
L G VL +GG+K+K+LAA R G+K V+ P +N KDL ++P V L+ + +V
Sbjct: 709 LTGRVLAIGGLKEKVLAARRAGVKTVLAPAKNKKDLEDIPENVRDELQFFFVDDIREVFA 768
Query: 814 QAFE 817
QA +
Sbjct: 769 QALK 772
>gi|256827871|ref|YP_003156599.1| ATP-dependent protease La [Desulfomicrobium baculatum DSM 4028]
gi|256577047|gb|ACU88183.1| ATP-dependent protease La [Desulfomicrobium baculatum DSM 4028]
Length = 804
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 319/736 (43%), Positives = 464/736 (63%), Gaps = 65/736 (8%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GR+ V+++GL R + + + I +++ +E E++ AL
Sbjct: 105 RMLKMPDGRLK--VLVQGLTRARITDFVQHDPFDMVNIQTIDELVVENPGPEEE----AL 158
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIH-KLADIFVASFEISFEEQLVMLDSV 177
R K + +++++ + G +L V H +LAD+ ++ + E +L+S
Sbjct: 159 LRSVKEQSEKILTL---RGIDAGEIMNVLNAVNEHGRLADLVASNLRMKSSEAQRILESH 215
Query: 178 DLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDD 237
D RL+ + + ++ + KI + + K+Q+E+ LR+Q++AI+ ELGD +
Sbjct: 216 DPIERLNLVNSQLVKEVEVASMQAKIQSMAKEGMDKAQREYFLREQLKAIRRELGDKGGE 275
Query: 238 EDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKAS 297
+++ L + + + G+P + K K+L RL+ M P T R Y++ + DLPW+K S
Sbjct: 276 GEEMEELRKTLNALGLPKKVKKEADKQLSRLESMHPDSSEATILRTYIDWLIDLPWKKTS 335
Query: 298 EEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLA 357
++ LD+K A + L DHY L +VK+RI+EYL+VRKL P +GP+LCFVGPPGVGKTSL
Sbjct: 336 KD-RLDIKEAAKILHEDHYNLEKVKERILEYLSVRKLNPSMKGPILCFVGPPGVGKTSLG 394
Query: 358 SSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEID 417
SIA +LGRKF+R+SLGG++DEA+IRGHRRTYIG+MPGR+I +K G NPV++LDEID
Sbjct: 395 KSIARSLGRKFVRMSLGGMRDEAEIRGHRRTYIGAMPGRIIQSMKDAGTINPVIMLDEID 454
Query: 418 KTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRM 477
K G+D RGDP+SALLEVLDPEQN +F DHYLNVP+DLSKV+F+ TAN IP LLDRM
Sbjct: 455 KLGNDFRGDPSSALLEVLDPEQNNSFTDHYLNVPYDLSKVMFICTANMLDTIPSALLDRM 514
Query: 478 EVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLE 537
EVI +PGYT +EK IA R+L+ R + ++GL ++ L I +A++ +I+ YTREAG+RNLE
Sbjct: 515 EVIRIPGYTEQEKTIIARRYLLTRQIKENGLTNDTLIISDAVLAEIIRGYTREAGLRNLE 574
Query: 538 RNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHE 597
R + ++ R A +VAE ++
Sbjct: 575 REIGSICRKYARRVAEGKK----------------------------------------- 593
Query: 598 VSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEAT 657
FR+T+ ++ K+LG P+F D E E PG+++GL WT +GGE+ +E +
Sbjct: 594 --GPFRVTTSALI------KLLGQPKFMDEE-RESSMPPGVALGLAWTPYGGEILHIECS 644
Query: 658 AMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGA 717
+ GKG+L LTG+LG+V+KESAQ AL++ R ++ L+L A+D DIHIH PAGA
Sbjct: 645 LLPGKGKLILTGKLGEVMKESAQAALSYARTKSASLKL-ADD---FFDTHDIHIHVPAGA 700
Query: 718 VPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIK 777
PKDGPSAGVTLVTAL+S S + V +D AMTGE+TLRG V+PVGG+K+KILAA +G+K
Sbjct: 701 TPKDGPSAGVTLVTALMSAISNEPVASDVAMTGEITLRGRVMPVGGIKEKILAAVSHGVK 760
Query: 778 RVILPERNLKDLVEVP 793
+V++P RN DL E+P
Sbjct: 761 KVLIPARNAHDLDEIP 776
>gi|452853506|ref|YP_007495190.1| Lon protease [Desulfovibrio piezophilus]
gi|451897160|emb|CCH50039.1| Lon protease [Desulfovibrio piezophilus]
Length = 847
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 321/755 (42%), Positives = 461/755 (61%), Gaps = 67/755 (8%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GR+ V+++GL R V+ ++ ++ A + L ++ EQ+ I
Sbjct: 151 RMLKMPDGRLK--VLVQGLARAKVKRFTSSDPFHIAELEPLMEPEVPELTSEQEA-LIRS 207
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
SR+ + L + Q + VL +LAD+ ++ + +L+ D
Sbjct: 208 SREQSERILSLRGISSQDIMS-----VLNNVNEPGRLADLIASNLRMKVSAAQKILECYD 262
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+RL + + ++ + +I + + K+Q++F LR+QM+AIK ELGD+ D+
Sbjct: 263 PIIRLELVNSQLLKEVEVANMQNRIQTMAKEGMDKAQRDFYLREQMKAIKRELGDDGDET 322
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ ++ + +GMP ++ K K+L RL+ M + T R YL+ + +LPW+K S
Sbjct: 323 EEMEDFKQGIMKSGMPKDVMKEANKQLHRLESMHAESSEATVIRTYLDWMIELPWKKLSR 382
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ LD+K A+ L+ DHY L +VK+RI+EYL+VRKL P +GP+LCF GPPGVGKTSL
Sbjct: 383 D-RLDIKKAEYILNEDHYDLEKVKERILEYLSVRKLNPKMKGPILCFAGPPGVGKTSLGR 441
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA +LGRKF R+SLGG++DEA+IRGHRRTYIG+MPGR+I +K+ G NPV++LDEIDK
Sbjct: 442 SIARSLGRKFHRMSLGGMRDEAEIRGHRRTYIGAMPGRIIQAIKQCGTRNPVIMLDEIDK 501
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
G+D RGDP+SALLEVLDPEQN +F D+YLNVPFDLSKV+FV TAN IP PL DRME
Sbjct: 502 LGNDFRGDPSSALLEVLDPEQNFSFTDYYLNVPFDLSKVMFVCTANMLDSIPGPLRDRME 561
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
+I +PGYT +EK I R++IPR + ++GL + L+I + +V VI+ YTREAG+RN+ER
Sbjct: 562 IIRIPGYTEQEKTVITRRYIIPRQVSENGLKEKELEISDKLVSKVIREYTREAGLRNVER 621
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+ L R A K AE E+
Sbjct: 622 EIGTLCRKMARKKAEGEK------------------------------------------ 639
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
F++T+ L +LGPP F + +A E V G++VGL WT GGE+ +E +
Sbjct: 640 -GPFKVTA------KNLYTLLGPPHFLE-DAKETVLPAGVAVGLAWTPVGGELLHIEVST 691
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHFPAG 716
M GKG+L LTG+LG+V+KESAQ AL+ RARA G+N + DIH+H PAG
Sbjct: 692 MPGKGKLTLTGKLGEVMKESAQAALSIARARADKY------GINPKFTEEMDIHVHVPAG 745
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAGVTLVTAL+S + + + AMTGE++LRG VLPVGG+K+KILAA G+
Sbjct: 746 ATPKDGPSAGVTLVTALISALTDTPINPEMAMTGEISLRGRVLPVGGIKEKILAAVSRGM 805
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
K V++P +N KDL E+P +L + I +++++V
Sbjct: 806 KTVLIPSQNKKDLSEIPEELLKRITIKPIEKIDEV 840
>gi|456354945|dbj|BAM89390.1| ATP-dependent protease [Agromonas oligotrophica S58]
Length = 807
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 332/795 (41%), Positives = 470/795 (59%), Gaps = 86/795 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + I+ G A L L ++ P G V V++EGL R V++ + R
Sbjct: 61 TQKNASDDDPAPDAIY--ETGTLASVLQL---LKLPDGTVK--VLVEGLERARVEKYTDR 113
Query: 89 GTYYTARISSLEMT---KIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRT 143
YY A +LE T +E E + + DF + + K + E++ V++ G
Sbjct: 114 ADYYEATAVALEDTDAKSVEAEALGRSVVSDFESYVKLNKKISAEVVGVVQSITDFG--- 170
Query: 144 KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
KLAD + + ++ +L+++ + RL K L++ + ++V ++I
Sbjct: 171 ----------KLADTVASHLAVKIADRQGILETLSVTTRLEKVLGLMESEISVLQVEKRI 220
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
+V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D+L LE ++ + + Q
Sbjct: 221 RSRVKRQMEKTQREYYLNEQMKAIQKELGD-EDGRDELADLEERINKTKLSKEAREKAQH 279
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL++L++M P T R YL+ + +PW K S+ + DL+AA+ LD+DHYGL +VK
Sbjct: 280 ELKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLEAAQAVLDADHYGLEKVKD 338
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
RI+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IR
Sbjct: 339 RIVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIR 398
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIGSMPG++I +++ NP+ LLDEIDK GSD RGDP+SALLEVLDPEQN TF
Sbjct: 399 GHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGSDFRGDPSSALLEVLDPEQNTTF 458
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
NDHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EKL IA +HLIP +
Sbjct: 459 NDHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTETEKLEIARKHLIPSAI 517
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+HGL S+ I + + LVI+RYTREAGVRNLER ++ LAR A +E +
Sbjct: 518 SKHGLDSKEWSIDDDALLLVIRRYTREAGVRNLEREISTLARKAV-------KELMMSKK 570
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP- 622
K V + E +E+ LG P
Sbjct: 571 KSVK------------------------------------------ITEKTVEEFLGVPK 588
Query: 623 -RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
R+ + E+ +++ GI GL WT+ GGE+ +E M GKG++ +TG L DV+KES
Sbjct: 589 YRYGEIESDDQI---GIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISA 645
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA + + L RDIH+H P GA PKDGPSAGV + T ++S+ +
Sbjct: 646 AASFVRSRAINYGIEPP----LFDRRDIHVHVPEGATPKDGPSAGVAMATTIISVMTGIP 701
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ +E
Sbjct: 702 VRHDVAMTGEITLRGRVLPIGGLKEKLLAASRGGIKTVLIPEDNAKDLTEISDAIKGGME 761
Query: 802 IILAKRMEDVLEQAF 816
II R++DV+ +A
Sbjct: 762 IIPVARLDDVVARAL 776
>gi|238893388|ref|YP_002918122.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|238545704|dbj|BAH62055.1| DNA-binding ATP-dependent protease La/heat shock K-protein
[Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
Length = 820
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 331/765 (43%), Positives = 465/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 120 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 177
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 178 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 221
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 222 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 281
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 282 DAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 340
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 341 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 400
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 401 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 460
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 461 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 519
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 520 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 579
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ GE+
Sbjct: 580 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GENL 611
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 612 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 648
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VR+RA L + A + + RDIH+H
Sbjct: 649 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRSRADKLGINA----DFYEKRDIHVHV 704
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 705 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 764
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 765 GGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 809
>gi|290474661|ref|YP_003467541.1| DNA-binding ATP-dependent protease La [Xenorhabdus bovienii
SS-2004]
gi|289173974|emb|CBJ80761.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Xenorhabdus bovienii SS-2004]
Length = 784
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 331/764 (43%), Positives = 460/764 (60%), Gaps = 85/764 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + L+ Y+ A++ LE + E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLTDNSEYFYAQVEYLESPVVDEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ L+++ + + +E + KLAD A + ++ +L+
Sbjct: 142 VKLNKKIPPEVLTSLHSIED----------------LAKLADTIAAHMPLKINDKQTVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ R+ +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVVERIEYLIAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ L RK++ A MP + V+ EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYETLRRKIEDAKMPKEAREKVEAELQKLKMMSPMSAEATVVRSYIDWMVQVPW-V 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD DHYGL RVK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLVKAQEVLDIDHYGLERVKERILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+L+ + ++GV NP+ LLDE
Sbjct: 365 LGRSIARATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLVQKMSKIGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVTFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L I + + +I+ YTREAGVRN
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELAIDDGAILGIIRYYTREAGVRN 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A +AL L+D +L
Sbjct: 544 LEREISKLCRKAV---------KAL------------LMDKKLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG R D A RV G GL WT GGE+
Sbjct: 568 ------------IEINADNLKNYLGVQRVDYGRADTENRV---GQVTGLAWTEVGGELLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E ++ GKG+L TG LG+V++ES Q ALT VRARA L + + + + RDIH+H
Sbjct: 613 IETASVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKLGISS----DFHEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GIK V++P+ N +DL E+P ++ LEI KR+EDVL A +
Sbjct: 729 GGIKTVLIPDENKRDLEEIPQNIIQDLEIHPVKRIEDVLSIALQ 772
>gi|146341125|ref|YP_001206173.1| ATP-dependent protease La [Bradyrhizobium sp. ORS 278]
gi|146193931|emb|CAL77948.1| ATP-dependent protease La [Bradyrhizobium sp. ORS 278]
Length = 807
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 335/794 (42%), Positives = 472/794 (59%), Gaps = 86/794 (10%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q ASD + I+ G A L L ++ P G V V++EGL R V++ + R
Sbjct: 62 QKNASDDDPAPDAIY--ETGTLASVLQL---LKLPDGTVK--VLVEGLERARVEKYTDRA 114
Query: 90 TYYTARISSLEMT---KIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
YY A +LE T +E E + + DF + + K + E++ V++ G
Sbjct: 115 DYYEATAVALEDTDAKSVEAEALGRSVVSDFESYVKLNKKISAEVVGVVQSITDFG---- 170
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
KLAD + + ++ +L+++ + RL K L++ + ++V ++I
Sbjct: 171 ---------KLADTVASHLAVKIADRQGILETLSVTTRLEKVLGLMESEISVLQVEKRIR 221
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D+L LE ++ + + Q E
Sbjct: 222 SRVKRQMEKTQREYYLNEQMKAIQKELGD-EDGRDELADLEERINKTKLSKEAREKAQHE 280
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L++L++M P T R YL+ + +PW K S+ + DL+AA+ LD+DHYGL +VK R
Sbjct: 281 LKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLEAAQAVLDADHYGLEKVKDR 339
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRG
Sbjct: 340 IVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRG 399
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG++I +++ NP+ LLDEIDK GSD RGDP+SALLEVLDPEQN TFN
Sbjct: 400 HRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGSDFRGDPSSALLEVLDPEQNTTFN 459
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP +
Sbjct: 460 DHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTETEKVEIARKHLIPSAIS 518
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+HGL S+ I + + LVI+RYTREAGVRNLER ++ LAR A +E + K
Sbjct: 519 KHGLDSKEWSIDDDALLLVIRRYTREAGVRNLEREISTLARKAV-------KELMMSKKK 571
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP-- 622
V +IT E +E+ LG P
Sbjct: 572 SV------------------------------------KIT------EKTVEEFLGVPKY 589
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
RF + E+ ++V GI GL WT+ GGE+ +E M GKG++ +TG L DV+KES A
Sbjct: 590 RFGEIESDDQV---GIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISAA 646
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA + + L RDIH+H P GA PKDGPSAGV + T ++S+ + V
Sbjct: 647 ASFVRSRAINYGIEPP----LFDRRDIHVHVPEGATPKDGPSAGVAMATTIISVMTGIPV 702
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ +EI
Sbjct: 703 RHDVAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMEI 762
Query: 803 ILAKRMEDVLEQAF 816
I R++DV+ +A
Sbjct: 763 IPVSRLDDVVARAL 776
>gi|220932327|ref|YP_002509235.1| ATP-dependent protease La [Halothermothrix orenii H 168]
gi|302425059|sp|B8CY71.1|LON_HALOH RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|219993637|gb|ACL70240.1| ATP-dependent protease La [Halothermothrix orenii H 168]
Length = 783
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 317/768 (41%), Positives = 464/768 (60%), Gaps = 85/768 (11%)
Query: 61 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT--KIEMEQ-------VEQ 111
V+ P+G + VV+EG+ R + + Y+ R L+ T ++++E + +
Sbjct: 86 VKLPNGMLK--VVVEGIKRARIIDFIEIDEYFEVRAEILDQTVPEVDLEMKALMKAVLNK 143
Query: 112 DPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQL 171
++I +R + + ++ +E+ + +D + E+ F ++
Sbjct: 144 FQEYIKYNRNLPSETIMTVTNIEEPAR----------------FSDTIASHLELKFRQEQ 187
Query: 172 VMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL 231
+L+++ +K RL+K E++ ++ ++V +KI +KV Q+ K+QKE+ LR+Q++AIKEEL
Sbjct: 188 DLLEAISIKERLNKLLEIIKDEIEILKVEQKIQKKVRKQVEKTQKEYYLREQLKAIKEEL 247
Query: 232 GDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADL 291
++++D++ + K + +P I + V KE+ +LKK P T R YL+ + DL
Sbjct: 248 DEDEEDDE-IEEYRNKAEELDLPEKIREKVDKEIEKLKKTPSMSPEATVIRNYLDCVLDL 306
Query: 292 PWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGV 351
PW K EE +DL AK LDS+HYGL VK+RI+EYLAVRKL P + P+LC +G PGV
Sbjct: 307 PWNKVREE-KIDLDEAKNVLDSEHYGLEDVKERILEYLAVRKLAPQKKSPILCLIGAPGV 365
Query: 352 GKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVM 411
GKTSL SIA ALGR F+R+SLGGV+DEA+IRGHRRTYIGS PGR+I+ ++ G NPV
Sbjct: 366 GKTSLGRSIARALGRDFVRLSLGGVRDEAEIRGHRRTYIGSRPGRIINAMREAGSKNPVF 425
Query: 412 LLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPP 471
LLDE+DK SD RGDPA+ALLEVLDPEQN F DHYL +PFDLSKV+FV TAN A PIP
Sbjct: 426 LLDEVDKMSSDFRGDPAAALLEVLDPEQNNEFTDHYLELPFDLSKVLFVTTANVAYPIPA 485
Query: 472 PLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREA 531
PLLDRMEVIELPGYT +EK+ IA+RHLIPR+L++HGL + + + +I+ YTREA
Sbjct: 486 PLLDRMEVIELPGYTEDEKVEIALRHLIPRILNEHGLTEDEIHFSSNSIYRIIREYTREA 545
Query: 532 GVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIP 590
GVRNLER LAA+ R + ++ E QA +++ + + LG P
Sbjct: 546 GVRNLERKLAAITRKVSKEIVEGRGRQARVTTQSIEKYLGVPKF---------------- 589
Query: 591 MGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGE 650
+++ + +RV G++ G+ +T GG+
Sbjct: 590 --------------------------------KYEKAQKKDRV---GVATGMAYTQTGGD 614
Query: 651 VQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIH 710
+ +E + GKG+L LTG LGDV+KESA+ AL+++R++ +L L N + D+H
Sbjct: 615 ILDIEVAVVPGKGKLTLTGSLGDVMKESARAALSYIRSKQEELGL----SDNFHEEYDLH 670
Query: 711 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILA 770
+H P GA PKDGPSAG+T+ +A+ S + + V+ AMTGE+TLRG VLPVGG+K KI+A
Sbjct: 671 VHVPKGATPKDGPSAGITIASAIASALTGQPVKGKYAMTGEVTLRGRVLPVGGIKTKIMA 730
Query: 771 AHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
A R G+K +I+PE N KD E+P + + + M+ VL+ G
Sbjct: 731 ARRAGLKDIIMPEENKKDFEEIPVKIKKDIRVNFVNHMDQVLDLILGG 778
>gi|374295512|ref|YP_005045703.1| ATP-dependent protease La [Clostridium clariflavum DSM 19732]
gi|359825006|gb|AEV67779.1| ATP-dependent protease La [Clostridium clariflavum DSM 19732]
Length = 811
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 324/761 (42%), Positives = 462/761 (60%), Gaps = 72/761 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T V++EG+ R + E + ++ A + + KI +E + + AL R+
Sbjct: 89 TIRVLVEGISRAEIAEFTQTEPFFMAEV----VEKIYVEDEDSKLEIEALKRR------- 137
Query: 129 LISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRL 183
++S E+ K + +++L + I +LADI ++ + E++ +L+ K+RL
Sbjct: 138 VVSTFEEYSKYNNKISPEIVLSVMSIEDPDQLADIITSNLVLKVEQKQEILNEFQPKLRL 197
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K E++ + ++ +++ + I KV Q+ K QKE+ LR+Q++ I+ ELGD + ++
Sbjct: 198 EKLLEIIVKEIEIMQIEKDINIKVRKQMDKMQKEYYLREQLKVIQSELGDKEGITGEVEE 257
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
+RK++ + K V KEL RL KM R YL+ I DLPW K +EEI +D
Sbjct: 258 YKRKLKEGNFGEEVEKKVLKELDRLLKMPSGSAEGAVIRTYLDWIFDLPWNKRTEEI-ID 316
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L+ A+ L+ DHYGL +VK+RI+E+LAVR LK D RGP+LC VGPPGVGKTS+A SIA A
Sbjct: 317 LERAEAILNEDHYGLEKVKERILEHLAVRMLKNDLRGPILCLVGPPGVGKTSIAKSIARA 376
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R ++R+SLGGV+DEA+IRGHRRTY+G+MPGR+I LK+ G NP++LLDEIDK SD
Sbjct: 377 LNRNYVRMSLGGVRDEAEIRGHRRTYVGAMPGRIISALKQAGSKNPLILLDEIDKMSSDF 436
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDPASA+LEVLD EQN F DHYL +PFDLS V+F+ TAN IP PLLDRMEVI L
Sbjct: 437 RGDPASAMLEVLDSEQNFAFRDHYLELPFDLSDVLFLTTANNLDTIPRPLLDRMEVIHLT 496
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
YT EEK+ IA+++L P+ + +HG+ ++I E V+ +I YTREAGVR+LER +A +
Sbjct: 497 SYTEEEKVNIAIKYLFPKQVAEHGIKKGSVKIDEQAVRDIINCYTREAGVRDLERQIATI 556
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A K+ +Q +S SNT
Sbjct: 557 CRKVAKKLVSSKQ------------------------------------QSVKITSNT-- 578
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
LEK LG ++ +A ++ GI+ GL WT GG+ +E M G G
Sbjct: 579 -----------LEKYLGTKKYRYDKANDK-DEIGIATGLAWTPVGGDTLSIEVNLMDGSG 626
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTGQLGDV+KESA+ A++++R+RA + ++ +D N DIHIH P GA+PKDGP
Sbjct: 627 KLELTGQLGDVMKESARAAMSFIRSRA-EQYMIEKDFYN---KYDIHIHVPEGAIPKDGP 682
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+TL TA+VS + V+ + AMTGE+TLRG VLP+GG+K+K+LAA+R GI VI+P
Sbjct: 683 SAGITLATAMVSALTGIPVKRNVAMTGEITLRGRVLPIGGLKEKVLAANRAGIDTVIIPV 742
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQ 824
N KDL ++P AV ++ ++A+ M+ VL A WR
Sbjct: 743 DNKKDLDDIPEAVRKKIKFVVAENMDTVLNTAL-VKTKWRN 782
>gi|389806653|ref|ZP_10203700.1| ATP-dependent serine proteinase La [Rhodanobacter thiooxydans LCS2]
gi|388445305|gb|EIM01385.1| ATP-dependent serine proteinase La [Rhodanobacter thiooxydans LCS2]
Length = 815
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 337/784 (42%), Positives = 476/784 (60%), Gaps = 61/784 (7%)
Query: 41 EVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE 100
E+ H G A L L ++ P G V V++EG R SV++ TAR +E
Sbjct: 58 EITDLHQVGTLAGVLQL---LKLPDGTVK--VLVEGQSRVSVEDFKEEDGMLTARSRVIE 112
Query: 101 MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQ--KQKTGGRTKVLLETVPI---HKL 155
P + A R+ + LIS+ EQ KQ +VL I ++
Sbjct: 113 ------------PVYNAKERELDVVSRTLISLFEQLVKQSRKLPPEVLASLSGIDDPSRV 160
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
AD A + ++ +L++ D+ +RL LVD + +V ++I +V+ Q+ KSQ
Sbjct: 161 ADSIAAHLSVRMADKQKVLETADVGLRLELLIGLVDGEMDLQQVEKRIRGRVKSQMEKSQ 220
Query: 216 KEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQ 275
+E+ L +QM+AI++ELGD +D +++ L++K++ +GMP + ++E +LK+M P
Sbjct: 221 REYYLNEQMKAIQKELGDGEDGPNEIEELQKKIEGSGMPKAVLTKARQEFGKLKQMSPMS 280
Query: 276 PGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK 335
T R YL+ + +PW+K S+ + DL+ A+E LD+DH+GL +VK+RI+EYLAV++
Sbjct: 281 AEATVVRNYLDWLVGVPWKKRSK-VRKDLQLAQEVLDADHFGLEKVKERILEYLAVQQRV 339
Query: 336 PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPG 395
+GP+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTYIGSMPG
Sbjct: 340 STMKGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYIGSMPG 399
Query: 396 RLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 455
R++ + ++G NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS
Sbjct: 400 RIVQNINKIGTKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNHAFNDHYLEVDLDLS 459
Query: 456 KVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI 515
+V++VATAN IP PLLDRMEVI +PGYT +EKL IA ++L+ + L +GL E L +
Sbjct: 460 EVMWVATANSLN-IPGPLLDRMEVIRIPGYTEDEKLGIAQKYLLAKQLKANGLKPEELSV 518
Query: 516 PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLD 575
E ++ +++ YTRE+GVRNLER ++ + R ++A LG
Sbjct: 519 TEGALRDIVRYYTRESGVRNLEREISKICRKVVKELA----------------LG----- 557
Query: 576 NRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERV 633
+V+ + + VD + L+ LG RFD +E V
Sbjct: 558 -------QVKKAKAKASPAKAAKGKAKAGPDRVKVDSSNLDHYLGVRRFDFGRKELQNEV 610
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL WT GGE+ +EA+ + GKG L TGQLGDV+KES Q AL+ VRARA L
Sbjct: 611 ---GLVTGLAWTQVGGELLSIEASVVPGKGRLVHTGQLGDVMKESIQAALSVVRARADRL 667
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ E Q DIH+H P GA PKDGPSAG+ + TALVS+ ++ VR++ AMTGE+T
Sbjct: 668 GIDPE----FHQKFDIHVHVPEGATPKDGPSAGIAMCTALVSVLTKVPVRSEVAMTGEIT 723
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAAHR GI VI+PE N KDLV++PA + +SLEI + +++VL+
Sbjct: 724 LRGRVLPIGGLKEKLLAAHRGGITTVIIPEDNKKDLVDMPANITSSLEIHPVRWIDEVLD 783
Query: 814 QAFE 817
A E
Sbjct: 784 IALE 787
>gi|374386679|ref|ZP_09644177.1| ATP-dependent protease La [Odoribacter laneus YIT 12061]
gi|373223629|gb|EHP45977.1| ATP-dependent protease La [Odoribacter laneus YIT 12061]
Length = 796
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 307/757 (40%), Positives = 458/757 (60%), Gaps = 66/757 (8%)
Query: 61 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSR 120
+E P G T I+ +G RF ++++ Y+ +I + K E E DP++ A++
Sbjct: 104 LEMPDGTTTAII--QGKKRFLLEDILYDDPYHVGKI----ILKQEERMPENDPEYNAIAE 157
Query: 121 QFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLK 180
K A +++ G +E++ L + ++ ++ + + +L+ LK
Sbjct: 158 SLKEMATKIVKYSSHIPNEAGFALKNIESMLF--LINFISSNTDVEYRSKQELLEIDSLK 215
Query: 181 VRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 240
R K E++ + + + + I +KV+ + K Q+E+ L QQM+ I++ELG N DE+
Sbjct: 216 QRAIKLLEILSKQVSLLELKNDIQKKVKIDIDKQQREYFLHQQMKTIQDELGGNPVDEE- 274
Query: 241 LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI 300
+ LE K + ++ + +KEL +LK++ P P Y+ YL + DLPW S++
Sbjct: 275 IKELEEKGKQKEWSDSVKEIFEKELNKLKRLNPASPDYSVQSNYLRELIDLPWNHYSKD- 333
Query: 301 DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 360
+LDL AKE LD+DHYGL +VK RI+EYLAV KLK D + P+LC GPPGVGKTSL S+
Sbjct: 334 NLDLDHAKEILDADHYGLEKVKDRILEYLAVLKLKADMKSPILCLYGPPGVGKTSLGKSV 393
Query: 361 ASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTG 420
A A+GR+F+R+SLGG+ DE++IRGHR+TYIG+MPGR+I +K+ G NPV +LDEIDK G
Sbjct: 394 AKAIGREFVRMSLGGLHDESEIRGHRKTYIGAMPGRIIQSIKKAGTSNPVFILDEIDKVG 453
Query: 421 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVI 480
+D RGDP SALLEVLDPEQN F+D++L++ +DLSKV+F+ATAN I PPL DRME+I
Sbjct: 454 NDFRGDPQSALLEVLDPEQNTNFHDNFLDIDYDLSKVMFIATANDISTIAPPLRDRMEII 513
Query: 481 ELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNL 540
E+ GY EEK IA RHLIP+ L+ HG+ + ++ P+ ++ ++I++YTRE+GVR+L++ +
Sbjct: 514 EVSGYLLEEKREIAKRHLIPKQLENHGVSKDHVEFPDEIIDVIIEKYTRESGVRSLDKLI 573
Query: 541 AALARAAAVKVAEQEQEQ-ALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVS 599
A + R A KVA ++ L ++K LGSP+
Sbjct: 574 AKIIRQIARKVAMNKKFHLTLDTNKIKEYLGSPIF------------------------- 608
Query: 600 NTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAM 659
RE + PG+ GL WT GGE+ F+E++
Sbjct: 609 --------------------------SREEYQGNDLPGVVTGLAWTAVGGEILFIESSYS 642
Query: 660 RGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVP 719
+GKG+L LTG LGDV+KESA +AL ++++ ++ + N+ +DIH+H PAGAVP
Sbjct: 643 KGKGQLSLTGNLGDVMKESATLALEYIKSHTKEIGI----DENIFDNKDIHVHVPAGAVP 698
Query: 720 KDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRV 779
KDGPSAG+T+VT+LVS + ++V+ AMTGE+TLRG VLPVGG+++KILAA R GIK +
Sbjct: 699 KDGPSAGITMVTSLVSSLTGRKVKKAIAMTGEITLRGKVLPVGGIREKILAAKRAGIKEI 758
Query: 780 ILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
IL N KD+ ++ L L+ +E+VL+ A
Sbjct: 759 ILCSENQKDIEDIKKEYLKGLKFHYVDTIEEVLKIAL 795
>gi|164686709|ref|ZP_02210737.1| hypothetical protein CLOBAR_00304 [Clostridium bartlettii DSM
16795]
gi|164604099|gb|EDQ97564.1| endopeptidase La [Clostridium bartlettii DSM 16795]
Length = 785
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 312/746 (41%), Positives = 457/746 (61%), Gaps = 61/746 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R +++E++ Y+ A I + K +++ D + AL R + E I+
Sbjct: 91 VLVEGISRGTIEEINQDKGYFEAVIDEIVYNK---DEIVNDMEVEALIRNVLESFEEYIN 147
Query: 132 VLEQKQKTGGRTKVLLETVPI-HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+ + V LE + + D ++ + E++ +L+ D+ RL ++
Sbjct: 148 I---GNRVSPEILVSLEEIENPDRFVDTIASNIYLKPEQKQQILEEFDIAKRLELLYSIL 204
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
+ +++ +KIT +V+ Q++K QKE+ LR+Q++AI++ELG+ +D + K++
Sbjct: 205 LEEIDILKIEKKITLRVKKQMNKVQKEYYLREQLKAIQKELGEEEDISSESQEYREKLKK 264
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
P +QKE+ + ++ P P + SR YL+ I LPW K +++ LD+K AKE
Sbjct: 265 IKAPKETKAKIQKEIDKFSRISPASPDISVSRNYLDTIFSLPWNKETKD-KLDIKKAKEV 323
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD +HYG+ +VK+RI+E+LAVR L +GP++C VGPPGVGKTS+A SIA++L RKF+R
Sbjct: 324 LDKEHYGMEKVKERILEFLAVRSLSKSLKGPIICLVGPPGVGKTSIAKSIAASLNRKFVR 383
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
ISLGGV+DEA+IRGHRRTY+G++PGR+I+G+K G NPV LLDEIDK SD +GD +SA
Sbjct: 384 ISLGGVRDEAEIRGHRRTYVGAIPGRIINGVKESGTKNPVFLLDEIDKMASDYKGDISSA 443
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
+LEVLDPEQNK F DHYL +PFDLSK++FV TAN IP PLLDRME+IEL GY EEK
Sbjct: 444 MLEVLDPEQNKNFVDHYLEIPFDLSKILFVTTANSLSTIPGPLLDRMEIIELSGYIEEEK 503
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
L IA ++L+ + ++++GL +F++I + ++ +I YTREAGVR LER + + R A K
Sbjct: 504 LNIAQKYLLVKQIEENGLKEDFVKIDDETMRDIISYYTREAGVRTLERTIGKICRKIAKK 563
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
E P L + +VV
Sbjct: 564 YVE-----------------DPTL-------------------------------TEVVV 575
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
+ LE+ LG ++ A + G+ GL WT GG VE ++GKG++ LTGQ
Sbjct: 576 KKEDLEEYLGKDKYTFDLAGVK-PEIGMVTGLAWTAVGGVTLNVEVNVLKGKGQVVLTGQ 634
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESAQ A++++R+ +D + +D Q +DIHIH P GA PKDGPSAGVT+
Sbjct: 635 LGDVMKESAQTAISYIRS-ISDRFDIPDD---FYQTKDIHIHIPEGATPKDGPSAGVTMA 690
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TA++S ++ VR D AMTGE+TLRG VLPVGG+K+K+LAAHR GIK+V+LPE L
Sbjct: 691 TAVISALTKIPVRCDVAMTGEITLRGRVLPVGGIKEKLLAAHRAGIKKVLLPEECKAQLD 750
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAF 816
E+P V +E +L K +++VLE A
Sbjct: 751 EIPQNVKDQMEFVLVKHLDEVLEHAL 776
>gi|374575868|ref|ZP_09648964.1| ATP-dependent protease La [Bradyrhizobium sp. WSM471]
gi|374424189|gb|EHR03722.1| ATP-dependent protease La [Bradyrhizobium sp. WSM471]
Length = 807
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 339/809 (41%), Positives = 476/809 (58%), Gaps = 89/809 (11%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q ASD + I+ G A L L ++ P G V V++EGL R VQ+ + R
Sbjct: 62 QKNASDDDPAPDSIY--ETGTLASVLQL---LKLPDGTVK--VLVEGLERARVQKYTDRA 114
Query: 90 TYYTARISSLEMT---KIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
YY A +L T +E E + + DF + + K + E++ V++
Sbjct: 115 DYYEATAVALADTDAKSVEAEAMARSVVSDFESYVKLNKKISAEVVGVVQA--------- 165
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
KLAD + + ++ +L+++ + RL K L++ + ++V ++I
Sbjct: 166 ----ITDFAKLADTVASHLAVKIADRQGILETLSVTQRLEKVLGLMESEISVLQVEKRIR 221
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELGD DD D+L LE K+ + + Q E
Sbjct: 222 SRVKRQMEKTQREYYLNEQMKAIQKELGD-DDGRDELADLEEKISKTKLSKEAREKAQHE 280
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L++L++M P T R YL+ + +PW K S+ + DL+AA+ LD+DHYGL +VK R
Sbjct: 281 LKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLEAAQAVLDADHYGLEKVKDR 339
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRG
Sbjct: 340 IVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRG 399
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TFN
Sbjct: 400 HRRTYIGSMPGKIIQSMRKAKSSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNATFN 459
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP +
Sbjct: 460 DHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTENEKVEIARKHLIPNAVS 518
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+HGL S+ I + + L+I+RYTREAGVRNLER L+ LAR A +E + K
Sbjct: 519 KHGLDSKEFSIDDDALLLLIRRYTREAGVRNLERELSTLARKAV-------KELMISKKK 571
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP-- 622
V V E LE++LG P
Sbjct: 572 SVK------------------------------------------VTEKTLEELLGVPKY 589
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
R+ + E+ +V GI GL WT+ GGE+ +E M GKG++ +TG L DV+KES A
Sbjct: 590 RYGEIESEPQV---GIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISAA 646
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA +V L RDIH+H P GA PKDGPSAGV + TA++S+ + V
Sbjct: 647 ASYVRSRA----IVYGIEPPLFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPV 702
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ +EI
Sbjct: 703 RHDVAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMEI 762
Query: 803 ILAKRMEDVLEQAF-EGGCP--WRQHSKL 828
I R++DV+ +A + P W + +K+
Sbjct: 763 IPVSRLDDVVAKALVKKPVPIVWEEDTKV 791
>gi|312115420|ref|YP_004013016.1| ATP-dependent protease La [Rhodomicrobium vannielii ATCC 17100]
gi|311220549|gb|ADP71917.1| ATP-dependent protease La [Rhodomicrobium vannielii ATCC 17100]
Length = 803
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 326/773 (42%), Positives = 461/773 (59%), Gaps = 70/773 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G A +++R V P G T+ V+++G+ RF V + A + +
Sbjct: 88 HRVGTVA---NIARYVTAPDG--THHVIVQGVERFRVLDFQQERPVLIANVQRI------ 136
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
+E E + A + A+E + +L Q + LAD+ A +I
Sbjct: 137 VEPSEDGAEIEARMMVLRQKAVEALELLPQVPTE--LVNAMQNATSGAMLADLVTAYMDI 194
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
E++ +L+++DL +R+ K + L+ ++ +R+ ++I ++ + + Q+E +LR+QM
Sbjct: 195 PSEQKQEILETIDLPIRMEKVSRLLSERIEVLRLTQEIGRQTKAVFDERQREAVLREQMA 254
Query: 226 AIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYL 285
AI+ +LG+ D D++ L + A MP+ + +KELRR +++ Q R YL
Sbjct: 255 AIQRQLGEGDGKSDEVAELAAAIAKAQMPTEVETQAKKELRRYERLPEQAAEAGMIRTYL 314
Query: 286 ELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCF 345
+ + +LPW E+ +D+ A++ L+ DH+GL ++KQRIIEYLAVRKL P + P+LCF
Sbjct: 315 DTLTELPWALPDEK-PIDIAQARKILEDDHFGLDKIKQRIIEYLAVRKLAPQGKAPILCF 373
Query: 346 VGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVG 405
VGPPGVGKTSL SIA A+ R F+R+SLGGV DEA+IRGHRRTYIGS+PG +I G+K+ G
Sbjct: 374 VGPPGVGKTSLGQSIARAMERPFVRVSLGGVHDEAEIRGHRRTYIGSLPGNIIQGIKKAG 433
Query: 406 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 465
N VM+LDEIDK G ++GDP +A+LEVLDPEQN TF D YL VPFDLS+V F+ATAN
Sbjct: 434 QRNAVMMLDEIDKMGRGIQGDPFAAMLEVLDPEQNNTFRDAYLGVPFDLSRVTFIATANM 493
Query: 466 AQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQ 525
IP PLLDRME+I+L GYT +EKL IA R+L+ R L+ +GL +E I + + +I+
Sbjct: 494 LDTIPGPLLDRMEIIQLAGYTAKEKLEIAKRYLVARQLEANGLTAEQAGIDDDALTAIIE 553
Query: 526 RYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKD-VHRLGSPLLDNRLADGAEV 584
YTREAGVR+LER + + R AV++AE E+ + D V LG P +N EV
Sbjct: 554 DYTREAGVRSLEREIGKVLRNVAVRIAEAPGEKVQIHTDDLVGILGQPRFEN------EV 607
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
M R + PG++ GL W
Sbjct: 608 AM---------------------------------------------RTSVPGVATGLAW 622
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GG++ F+EAT GKG L LTGQLGDV++ESAQ AL+ ++ R+ L L L
Sbjct: 623 TPVGGDILFIEATRAPGKGVLILTGQLGDVMRESAQAALSLIKNRSASLGL----DPALF 678
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
+ DIHIH PAGA PKDGPSAGV + TAL SL S + VR+DTAMTGE++LRGLVLPVGG+
Sbjct: 679 EKSDIHIHVPAGATPKDGPSAGVAMFTALYSLLSGRTVRSDTAMTGEISLRGLVLPVGGI 738
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
K+K+ AA R G+ RV+LP RN +D ++P SL+ I +R++DV+ A E
Sbjct: 739 KEKVTAAARAGLTRVMLPARNRRDYDDIPEETRKSLDFIWLERVDDVIAAALE 791
>gi|152968974|ref|YP_001334083.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|290510112|ref|ZP_06549482.1| ATP-dependent protease La [Klebsiella sp. 1_1_55]
gi|365138466|ref|ZP_09345150.1| lon protease [Klebsiella sp. 4_1_44FAA]
gi|386033454|ref|YP_005953367.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae KCTC
2242]
gi|402782114|ref|YP_006637660.1| ATP-dependent protease La [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|419973310|ref|ZP_14488735.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419978494|ref|ZP_14493790.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419983880|ref|ZP_14499029.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419989932|ref|ZP_14504906.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419995811|ref|ZP_14510616.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420000722|ref|ZP_14515380.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420007652|ref|ZP_14522145.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420013283|ref|ZP_14527594.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420018368|ref|ZP_14532565.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420024459|ref|ZP_14538472.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420030217|ref|ZP_14544044.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420041654|ref|ZP_14555150.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420047715|ref|ZP_14561031.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420058261|ref|ZP_14571274.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420064549|ref|ZP_14577358.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420070364|ref|ZP_14583016.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420076105|ref|ZP_14588578.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420084376|ref|ZP_14596636.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|424829259|ref|ZP_18253987.1| ATP-dependent protease La [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|424934794|ref|ZP_18353166.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425078086|ref|ZP_18481189.1| lon protease [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425080160|ref|ZP_18483257.1| lon protease [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|425088719|ref|ZP_18491812.1| lon protease [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|425090282|ref|ZP_18493367.1| lon protease [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428933608|ref|ZP_19007156.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae JHCK1]
gi|428939229|ref|ZP_19012342.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae VA360]
gi|449060065|ref|ZP_21737737.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae hvKP1]
gi|150953823|gb|ABR75853.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|289776828|gb|EFD84826.1| ATP-dependent protease La [Klebsiella sp. 1_1_55]
gi|339760582|gb|AEJ96802.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae KCTC
2242]
gi|363654926|gb|EHL93799.1| lon protease [Klebsiella sp. 4_1_44FAA]
gi|397348782|gb|EJJ41880.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397351565|gb|EJJ44648.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397354931|gb|EJJ47957.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397366795|gb|EJJ59410.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397368453|gb|EJJ61059.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397372937|gb|EJJ65409.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397380232|gb|EJJ72417.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397384353|gb|EJJ76473.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397390325|gb|EJJ82235.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397399074|gb|EJJ90731.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397402038|gb|EJJ93650.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397416555|gb|EJK07728.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397418191|gb|EJK09350.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397433255|gb|EJK23905.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397437302|gb|EJK27871.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397441746|gb|EJK32112.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397447616|gb|EJK37806.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397450262|gb|EJK40372.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402542976|gb|AFQ67125.1| ATP-dependent protease La [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|405591065|gb|EKB64578.1| lon protease [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405601811|gb|EKB74964.1| lon protease [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405607085|gb|EKB80055.1| lon protease [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405613966|gb|EKB86687.1| lon protease [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|407808981|gb|EKF80232.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|414706678|emb|CCN28382.1| ATP-dependent protease La [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|426304300|gb|EKV66447.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae VA360]
gi|426304862|gb|EKV66996.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae JHCK1]
gi|448874273|gb|EMB09328.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae hvKP1]
Length = 784
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 331/765 (43%), Positives = 465/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ GE+
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GENL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VR+RA L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRSRADKLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|386402536|ref|ZP_10087314.1| ATP-dependent protease La [Bradyrhizobium sp. WSM1253]
gi|385743162|gb|EIG63358.1| ATP-dependent protease La [Bradyrhizobium sp. WSM1253]
Length = 807
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 339/809 (41%), Positives = 476/809 (58%), Gaps = 89/809 (11%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q ASD + I+ G A L L ++ P G V V++EGL R VQ+ + R
Sbjct: 62 QKNASDDDPAPDSIY--ETGTLASVLQL---LKLPDGTVK--VLVEGLERARVQKYTDRA 114
Query: 90 TYYTARISSLEMT---KIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
YY A +L T +E E + + DF + + K + E++ V++
Sbjct: 115 DYYEATAIALADTDAKSVEAEAMARSVVSDFESYVKLNKKISAEVVGVVQA--------- 165
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
KLAD + + ++ +L+++ + RL K L++ + ++V ++I
Sbjct: 166 ----ITDFAKLADTVASHLAVKIADRQGILETLSVTQRLEKVLGLMESEISVLQVEKRIR 221
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELGD DD D+L LE K+ + + Q E
Sbjct: 222 SRVKRQMEKTQREYYLNEQMKAIQKELGD-DDGRDELADLEEKISKTKLSKEAREKAQHE 280
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L++L++M P T R YL+ + +PW K S+ + DL+AA+ LD+DHYGL +VK R
Sbjct: 281 LKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLEAAQAVLDADHYGLEKVKDR 339
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRG
Sbjct: 340 IVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRG 399
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TFN
Sbjct: 400 HRRTYIGSMPGKIIQSMRKAKSSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNATFN 459
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP +
Sbjct: 460 DHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTENEKVEIARKHLIPNAVS 518
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+HGL S+ I + + L+I+RYTREAGVRNLER L+ LAR A +E + K
Sbjct: 519 KHGLDSKEFSIDDDALLLLIRRYTREAGVRNLERELSTLARKAV-------KELMISKKK 571
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP-- 622
V V E LE++LG P
Sbjct: 572 SVK------------------------------------------VTEKTLEELLGVPKY 589
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
R+ + E+ +V GI GL WT+ GGE+ +E M GKG++ +TG L DV+KES A
Sbjct: 590 RYGEIESEPQV---GIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISAA 646
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA +V L RDIH+H P GA PKDGPSAGV + TA++S+ + V
Sbjct: 647 ASYVRSRA----IVYGIEPPLFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPV 702
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ +EI
Sbjct: 703 RHDVAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMEI 762
Query: 803 ILAKRMEDVLEQAF-EGGCP--WRQHSKL 828
I R++DV+ +A + P W + +K+
Sbjct: 763 IPVSRLDDVVAKALVKKPVPIVWEEDTKV 791
>gi|419762103|ref|ZP_14288352.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397745021|gb|EJK92230.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 818
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 331/765 (43%), Positives = 465/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 118 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 175
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 176 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 219
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 220 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 279
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 280 DAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 338
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 339 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 398
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 399 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 458
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 459 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 517
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 518 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 577
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ GE+
Sbjct: 578 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GENL 609
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 610 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 646
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VR+RA L + A + + RDIH+H
Sbjct: 647 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRSRADKLGINA----DFYEKRDIHVHV 702
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 703 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 762
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 763 GGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 807
>gi|285017390|ref|YP_003375101.1| endopeptidase la protein [Xanthomonas albilineans GPE PC73]
gi|283472608|emb|CBA15113.1| probable endopeptidase la protein [Xanthomonas albilineans GPE
PC73]
Length = 824
Score = 576 bits (1485), Expect = e-161, Method: Compositional matrix adjust.
Identities = 341/780 (43%), Positives = 478/780 (61%), Gaps = 58/780 (7%)
Query: 43 IHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT 102
+ +N G A+ L L ++ P G T V++EGL R SV ++ R +L+
Sbjct: 66 VDLYNVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVSVNKVVERD-------GALQGE 113
Query: 103 KIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLAD 157
E++ E + R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 114 GREIDAAESREE-----REVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPGRLAD 168
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
A + ++ +L+++ + RL LVD + ++ ++I +V+ Q+ KSQ+E
Sbjct: 169 TIAAHIGVRLADKQRLLETLQVGERLEMLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQRE 228
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELGD DD +L L RK+ AGMP + + EL +L++M P
Sbjct: 229 YYLNEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLRQMSPMSAE 288
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + +PW+K S+ + DLK A+E LD+DHYGL +VK+RI+EYLAV+
Sbjct: 289 AAVVRNYLDWLLGVPWKKRSK-VRKDLKVAQETLDADHYGLEKVKERILEYLAVQSRVKQ 347
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR+
Sbjct: 348 MKGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRI 407
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+ L +VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V
Sbjct: 408 VQNLNKVGSRNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEV 467
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N IP PLLDRMEVI +PGYT +EKL IA R+L P+ L +GL + L+I
Sbjct: 468 MFVATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLTPKQLKANGLKQDELEIGA 526
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
++ +++ YTRE+GVRNLER +A + R ++A A P S V + +
Sbjct: 527 DAIRDIVRYYTRESGVRNLEREVAKICRKVVKEIA-----LAGPVSAAVAKKTAAKKSGA 581
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
D A V V LEK LG RFD A E+ G
Sbjct: 582 RKDKARVS------------------------VGSKNLEKYLGVRRFDFGRAEEQNEI-G 616
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+ GL WT GG++ +E+T + GKG + LTGQLGDV+KESA AL+ VR+RA L + A
Sbjct: 617 LVTGLAWTEVGGDLLQIESTLVPGKGAVILTGQLGDVMKESASAALSVVRSRAERLGIEA 676
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
+ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ V+AD AMTGE+TLRG
Sbjct: 677 ----DFLQKQDVHLHVPDGATPKDGPSAGIAMVTSLVSMLTKVPVKADVAMTGEITLRGR 732
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
V +GG+K+K+LAA R GI+ V++PE N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 733 VSAIGGLKEKLLAALRGGIRTVLIPEENRKDLADIPENVTRDLKIVSVKWIDEVLDLALE 792
>gi|387789953|ref|YP_006255018.1| ATP-dependent protease La [Solitalea canadensis DSM 3403]
gi|379652786|gb|AFD05842.1| ATP-dependent protease La [Solitalea canadensis DSM 3403]
Length = 812
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/761 (41%), Positives = 449/761 (59%), Gaps = 65/761 (8%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ + ++ P G T V+++G RF++ E+ Y+ A I+ E K D +F
Sbjct: 94 YIIKTLQMPDGNTT--VIIQGKRRFTIGEMVQSEPYFQAHINLFEEPK-----PSNDKEF 146
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
AL K + ++I +E+ L + ++ E+ +L+
Sbjct: 147 KALISSLKELSQQIIQNSPNIPSEAAFAIKNIESPSF--LVNFICSNMNAEVGEKQALLE 204
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+LK R E + + LQ + + +I KV L K Q+E+ L QQ++ I+EELG N
Sbjct: 205 ETNLKKRAEMVLEHLTKELQMLELKNQIQSKVRVDLDKQQREYFLHQQLKTIQEELGGNT 264
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D + + L + + + +H KEL +L +M P Y+ YLEL+ DLPW++
Sbjct: 265 PDLE-VQNLRERGSKKKWSAEVKEHFNKELEKLARMNPAAAEYSVITNYLELLIDLPWDE 323
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+++ + DLK AK+ LD DH+GL +VK RI+EY+AV KLK D + P+LC VGPPGVGKTS
Sbjct: 324 YTKD-NFDLKRAKKILDKDHFGLEKVKDRILEYIAVLKLKHDMKAPILCLVGPPGVGKTS 382
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A+GRK++R++LGGV+DEA+IRGHR+TYIG+MPGR+I LK+ NPV +LDE
Sbjct: 383 LGKSIAKAVGRKYVRMALGGVRDEAEIRGHRKTYIGAMPGRVIQSLKKAKSANPVFVLDE 442
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK G+D RGDP+SALLEVLDPEQN F+DHY+ + FDLS V+F+ATAN I P L D
Sbjct: 443 IDKVGNDFRGDPSSALLEVLDPEQNNAFSDHYVELDFDLSNVMFIATANSLGSIHPALRD 502
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+IE+ GYT EEK++IA ++LIP+ L+ HGL S+ I ++++ +I+ YTRE+GVR
Sbjct: 503 RMEIIEVNGYTVEEKIQIAKKYLIPKQLEAHGLKSKHANIKSSVIETIIENYTRESGVRT 562
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LE+ +A L R A VA +E+ + KDV R+
Sbjct: 563 LEKKIATLVRGVAKSVALEEEYDTTLTDKDVERI-------------------------- 596
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
LGP FD E + A G+ GL WT GG++ F+E
Sbjct: 597 -----------------------LGPSIFDKDEYEDNSVA-GVVTGLAWTQVGGDILFIE 632
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ GKG+L LTG LGDV+KESA IAL ++R+ + L D+H+H PA
Sbjct: 633 TSISPGKGKLTLTGSLGDVMKESAVIALAYLRSHGKKFGI----DTRLFDQWDVHVHVPA 688
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GAVPKDGPSAG+T++T+L S F++++VR+ AMTGE+TLRG VLPVGG+K+KILAA R G
Sbjct: 689 GAVPKDGPSAGITMLTSLASAFTQRKVRSQLAMTGEITLRGKVLPVGGIKEKILAAKRAG 748
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
IK VI+ ++N KD+ E+ + ++ M +VLE A
Sbjct: 749 IKEVIMCKQNRKDVEEINQDYIKDMKFHYVTEMREVLEFAL 789
>gi|219847996|ref|YP_002462429.1| ATP-dependent protease La [Chloroflexus aggregans DSM 9485]
gi|302425095|sp|B8G736.1|LON_CHLAD RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|219542255|gb|ACL23993.1| ATP-dependent protease La [Chloroflexus aggregans DSM 9485]
Length = 824
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 334/756 (44%), Positives = 456/756 (60%), Gaps = 78/756 (10%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTAR--------ISSLEMTKIEMEQVEQDPD-FIALSRQF 122
V+LEG R + E +Y R +S LE+ + ME V+Q D F+ +
Sbjct: 108 VILEGQSRAQIIEAIQITPFYRVRCRPYTDPPVSGLEVEAL-METVKQQVDEFVEHLGEV 166
Query: 123 KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
A++ + +++ P H LADI F+++L +L+++D R
Sbjct: 167 PQEAVQFVHRIDR---------------PGH-LADIVTWGPAFDFKDRLEVLNTLDPVER 210
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L K ++ R L+ +++ KI Q + L +SQ+E+ LR+Q+R I+ ELG++++ +D +
Sbjct: 211 LRKVYLVLARQLELLKLRVKIQQDTKEVLDQSQREYFLREQLRIIRRELGEDEEGDDPID 270
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI-D 301
L RK+ P + EL+RL + P R YL+ I LPW A EE+ +
Sbjct: 271 ELRRKIHELDAPEYVKNQALHELKRLAQQGMNNPESGVIRTYLDWILSLPW--ADEELPE 328
Query: 302 LDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDA-RGPVLCFVGPPGVGKTSLASSI 360
+ + A++ LD+DHYGL +VK+RI+EYLAVRKL D R P+LCFVGPPGVGKTSL SI
Sbjct: 329 ISITEAQKVLDADHYGLEKVKERILEYLAVRKLAGDKMRSPILCFVGPPGVGKTSLGRSI 388
Query: 361 ASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTG 420
A ALGRKF+R SLGGV+DEA+IRGHRRTYIG+MPGR+I +K +PV +LDE+DK G
Sbjct: 389 ARALGRKFVRTSLGGVRDEAEIRGHRRTYIGAMPGRIIQAMKNAKSKSPVYILDEVDKIG 448
Query: 421 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVI 480
D RGDP SALLEVLDPEQN F+DHYL +PFDLSKVIF+ATAN+ PIP PL DRME+I
Sbjct: 449 LDFRGDPTSALLEVLDPEQNNAFSDHYLEIPFDLSKVIFIATANQLDPIPLPLRDRMEII 508
Query: 481 ELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNL 540
E+ GYT +EKL IA LIP+ + HGL + ++ E + +I+ YTREAGVR LER +
Sbjct: 509 EIGGYTEDEKLEIARGFLIPKQREFHGLTEDQIEFTEGAILKLIREYTREAGVRGLEREI 568
Query: 541 AALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSN 600
A+L R A +VAEQ E+ E+
Sbjct: 569 ASLCRKVARQVAEQT-------------------------------------EANGELPP 591
Query: 601 TFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
F V+DEA + K LGP R+ A E+ G++ G+ WT+ GG++ +E +
Sbjct: 592 KF------VIDEAAVVKYLGPERYTYGIAEEQDEV-GVATGVAWTSAGGDILSIEVLPFK 644
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPK 720
GKG+L LTGQLG+V+KESAQ A+++VR+RA D + N + +IHIH P GAVPK
Sbjct: 645 GKGQLQLTGQLGEVMKESAQTAVSYVRSRAADFGI----DPNTFEETNIHIHIPEGAVPK 700
Query: 721 DGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVI 780
D PSAG+TL TAL+S + VR D AMTGE+TLRG VLP+GG+K+K LAAHR GI+ I
Sbjct: 701 DDPSAGITLTTALISALTGTPVRRDVAMTGEVTLRGKVLPIGGLKEKTLAAHRAGIRTFI 760
Query: 781 LPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+ N KD+ E+P V L +I M++VL A
Sbjct: 761 LPKENAKDISELPEKVRRELNLIPVSSMDEVLRIAL 796
>gi|261822505|ref|YP_003260611.1| DNA-binding ATP-dependent protease La [Pectobacterium wasabiae
WPP163]
gi|421083046|ref|ZP_15543925.1| DNA-binding ATP-dependent protease La [Pectobacterium wasabiae CFBP
3304]
gi|261606518|gb|ACX89004.1| ATP-dependent protease La [Pectobacterium wasabiae WPP163]
gi|385872813|gb|AFI91333.1| ATP-dependent protease La [Pectobacterium sp. SCC3193]
gi|401702272|gb|EJS92516.1| DNA-binding ATP-dependent protease La [Pectobacterium wasabiae CFBP
3304]
Length = 793
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 329/763 (43%), Positives = 463/763 (60%), Gaps = 85/763 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAHAEYLDSPAIDEREQEVLMRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLSDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRGRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D++ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEIEALKRKIEAAKMPKDAREKAEAELQKLKMMSPMSAEATVVRSYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD+DHYGL RVK+RI+EYLAV+ RGP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLLKAQEMLDTDHYGLDRVKERILEYLAVQSRVSKIRGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + ++GV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKIGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLVPKQIERNALKKGELSVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ + M +ST
Sbjct: 544 LEREISKLCRKA--------------------------------------VKTLLMDKST 565
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAE--RVAAPGISVGLVWTNFGGEVQF 653
+ V L+ LG RFD A + RV G GL WT GG++
Sbjct: 566 KHIQ----------VSGDNLKDFLGVQRFDYGRADDENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GIK V++P+ N +DL ++P V+A LEI KR+E+VL A
Sbjct: 729 GGIKTVLIPDDNKRDLEDIPQNVIADLEIHPVKRIEEVLALAL 771
>gi|383771492|ref|YP_005450557.1| ATP-dependent protease LA [Bradyrhizobium sp. S23321]
gi|381359615|dbj|BAL76445.1| ATP-dependent protease LA [Bradyrhizobium sp. S23321]
Length = 823
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 335/790 (42%), Positives = 469/790 (59%), Gaps = 76/790 (9%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + I+ G A L L ++ P G V V++EGL R VQ+ + R
Sbjct: 77 TQKNASDDDPAPDAIY--ETGTLASVLQL---LKLPDGTVK--VLVEGLERARVQKYTDR 129
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLE 148
YY A +++ + + + VE + ALSR + + + K+ + V+
Sbjct: 130 SEYYEA--TAIALADTDAKSVEAE----ALSRSVVSDFESYVKL--NKKISAEVVGVVQA 181
Query: 149 TVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVE 208
KLAD + + ++ +L+++ + RL K L++ + ++V ++I +V+
Sbjct: 182 ITDFAKLADTVASHLAVKIADRQGILETLSVTTRLEKVLGLMESEISVLQVEKRIRSRVK 241
Query: 209 GQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRL 268
Q+ K+Q+E+ L +QM+AI++ELGD DD D+L LE K+ + + Q EL++L
Sbjct: 242 RQMEKTQREYYLNEQMKAIQKELGD-DDGRDELADLEEKISKTKLSKEAREKAQHELKKL 300
Query: 269 KKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEY 328
++M P T R YL+ + +PW K S+ + DL AA+ LDSDHYGL +VK+RI+EY
Sbjct: 301 RQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKDLGAAQAVLDSDHYGLEKVKERIVEY 359
Query: 329 LAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRT 388
LAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRGHRRT
Sbjct: 360 LAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRGHRRT 419
Query: 389 YIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL 448
YIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TF DHYL
Sbjct: 420 YIGSMPGKIIQSMRKAKSSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTFADHYL 479
Query: 449 NVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGL 508
V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP + +HGL
Sbjct: 480 EVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTENEKVEIARKHLIPNAVSKHGL 538
Query: 509 GSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR 568
S+ I + + L+I+RYTREAGVRNLER L+ LAR A +E + K V
Sbjct: 539 DSKEFSIDDDALLLLIRRYTREAGVRNLERELSTLARKAV-------KELMISKKKSVK- 590
Query: 569 LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFDD 626
V E LE++LG P R+ +
Sbjct: 591 -----------------------------------------VTEKTLEELLGVPKYRYGE 609
Query: 627 REAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWV 686
E+ +V GI GL WT+ GGE+ +E M GKG++ +TG L DV+KES A ++V
Sbjct: 610 IESEPQV---GIVTGLAWTDVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISAAASYV 666
Query: 687 RARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADT 746
R+RA +V L RDIH+H P GA PKDGPSAGV + TA++S+ + VR D
Sbjct: 667 RSRA----IVYGIEPPLFDRRDIHVHVPEGATPKDGPSAGVAMATAIISVMTGIPVRHDV 722
Query: 747 AMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAK 806
AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL E+ A+ +EII
Sbjct: 723 AMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPEDNAKDLTEISDAIKGGMEIIPVS 782
Query: 807 RMEDVLEQAF 816
R++DV+ +A
Sbjct: 783 RLDDVVARAL 792
>gi|288936832|ref|YP_003440891.1| ATP-dependent protease La [Klebsiella variicola At-22]
gi|288891541|gb|ADC59859.1| ATP-dependent protease La [Klebsiella variicola At-22]
Length = 802
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 331/765 (43%), Positives = 465/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 102 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 159
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 160 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 203
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 204 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 263
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 264 DAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 322
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 323 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 382
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 383 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 442
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 443 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 501
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 502 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 561
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ GE+
Sbjct: 562 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GENL 593
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 594 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 630
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VR+RA L + A + + RDIH+H
Sbjct: 631 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRSRADKLGINA----DFYEKRDIHVHV 686
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 687 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 746
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 747 GGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 791
>gi|21230441|ref|NP_636358.1| ATP-dependent serine proteinase La [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66769565|ref|YP_244327.1| ATP-dependent serine proteinase La [Xanthomonas campestris pv.
campestris str. 8004]
gi|188992773|ref|YP_001904783.1| Endopeptidase La [Xanthomonas campestris pv. campestris str. B100]
gi|21112003|gb|AAM40282.1| ATP-dependent serine proteinase La [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574897|gb|AAY50307.1| ATP-dependent serine proteinase La [Xanthomonas campestris pv.
campestris str. 8004]
gi|167734533|emb|CAP52743.1| Endopeptidase La [Xanthomonas campestris pv. campestris]
Length = 823
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 337/777 (43%), Positives = 479/777 (61%), Gaps = 63/777 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A+ L L ++ P G T V++EGL R +V +++ + R + +E +
Sbjct: 69 YTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVAEQDGALQGRGTEVEASD-- 121
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 122 ----AREP------RELEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+ ++ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLEITEIGDRLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRTK-VRKDLKVAQDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGRL+
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRLVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN TFNDHYL V DLS+V+FV
Sbjct: 411 LNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNHTFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ + +GL E ++I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIAMRYLVPKQIKANGLKPEEIEIGSDAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ V++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 530 QDVVRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
P + V+ + + + V L+K LG RFD A E G+
Sbjct: 565 ---------PQPAAKKAVAKKAKPKALVTVTSKNLDKYLGVRRFDFGRAEEENEI-GLVT 614
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +E+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 615 GLAWTEVGGELLQIESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----D 670
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ +RAD AMTGE+TLRG V
Sbjct: 671 VDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSILTKVPIRADVAMTGEITLRGRVSA 730
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI+ V++P+ N KDL ++PA V L+I+ K +++VL+ A E
Sbjct: 731 IGGLKEKLLAALRGGIRTVLIPDENRKDLADIPANVTRDLKIVPVKWIDEVLDLALE 787
>gi|262042475|ref|ZP_06015634.1| ATP-dependent protease La [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330011535|ref|ZP_08307121.1| endopeptidase La [Klebsiella sp. MS 92-3]
gi|259040179|gb|EEW41291.1| ATP-dependent protease La [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534152|gb|EGF60787.1| endopeptidase La [Klebsiella sp. MS 92-3]
Length = 802
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 331/765 (43%), Positives = 465/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 102 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 159
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 160 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 203
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 204 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 263
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 264 DAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 322
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 323 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 382
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 383 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 442
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 443 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 501
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 502 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 561
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ GE+
Sbjct: 562 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GENL 593
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 594 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 630
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VR+RA L + A + + RDIH+H
Sbjct: 631 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRSRADKLGINA----DFYEKRDIHVHV 686
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 687 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 746
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 747 GGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 791
>gi|398792056|ref|ZP_10552754.1| ATP-dependent protease La [Pantoea sp. YR343]
gi|398214188|gb|EJN00771.1| ATP-dependent protease La [Pantoea sp. YR343]
Length = 784
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 327/769 (42%), Positives = 465/769 (60%), Gaps = 86/769 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + L+ G ++ A+ L +IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRAHITTLADNGDHFVAQAEYLVSPEIEEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTVAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP+ + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYEALKRKIEAAKMPTEAREKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-V 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRKAQETLDIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKEKEITVDDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A ++ + M +S
Sbjct: 544 LERELSKLCRKA--------------------------------------VKTLLMDKSK 565
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
+ V++ L+ LG RF D AE + G GL WT GG++ +E
Sbjct: 566 KHI----------VINGDNLKDFLGVQRF-DYGRAESESRVGQVTGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHF 713
+ GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H
Sbjct: 615 TACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VR+D AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRSDVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
GIK V++P+ N +DL ++P V+A LEI KR+E+VL A E P+
Sbjct: 729 GGIKTVLIPDENKRDLEDIPQNVIADLEIHPVKRIEEVLNLALE-NAPY 776
>gi|325104628|ref|YP_004274282.1| ATP-dependent protease La [Pedobacter saltans DSM 12145]
gi|324973476|gb|ADY52460.1| ATP-dependent protease La [Pedobacter saltans DSM 12145]
Length = 822
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 310/757 (40%), Positives = 450/757 (59%), Gaps = 67/757 (8%)
Query: 61 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSR 120
++ P G T V+++G RF +QE Y+ A ++ E + ++ D +F A+
Sbjct: 113 LQMPDGNTT--VIIQGKNRFQLQEELQEEPYFKAAVTKFEEVRPKL-----DKEFKAMVS 165
Query: 121 QFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLK 180
K AM++I G +E+ P L + ++ + E+ ML+ +L+
Sbjct: 166 SVKEMAMQIIQYSPNIPSEAGIAIKNIESTPF--LINFISSNMNGTVSEKQKMLEVANLR 223
Query: 181 VRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 240
R E + LQ + + +I KV+ L K Q+++ L QQ++ I+EELG N D +
Sbjct: 224 TRAEMVLEHLTLELQMLELKNQIQNKVKVDLDKQQRDYFLNQQLKTIQEELGGNSPDME- 282
Query: 241 LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI 300
+ L + + H KEL +L +M P Y+ YLE++ DLPW ++++
Sbjct: 283 IENLRARAMKKLWSKDTASHFSKELDKLARMNPAAADYSVQINYLEVLLDLPWNFSTKD- 341
Query: 301 DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 360
+ DLK A++ LD DHYGL +VK+RIIEYLAV KLK + + P+LC VGPPGVGKTSL SI
Sbjct: 342 NFDLKRAQKILDKDHYGLEKVKKRIIEYLAVLKLKHNMKAPILCLVGPPGVGKTSLGKSI 401
Query: 361 ASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTG 420
A ALGRK++R++LGGV+DEA+IRGHR+TYIG+MPGR+I +K+ G NPV +LDEIDK G
Sbjct: 402 AKALGRKYVRMALGGVRDEAEIRGHRKTYIGAMPGRVIQSIKKAGSANPVFVLDEIDKVG 461
Query: 421 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVI 480
+D RGDP+SALLEVLDPEQN FNDH+L + +DLS V+F+ATAN I P LLDRME+I
Sbjct: 462 NDHRGDPSSALLEVLDPEQNNAFNDHFLELDYDLSNVMFIATANSLSSIQPALLDRMEII 521
Query: 481 ELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNL 540
E+ GYT EEK+ IA +HL+P+ + HGL S+ + + ++++ +I+ YTRE+GVR LE+ +
Sbjct: 522 EVNGYTIEEKIEIARKHLLPKQKELHGLKSKDVNLKNSVIEKIIEDYTRESGVRGLEKKI 581
Query: 541 AALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVS 599
A+ R AA K+A +E+ ++V LG+P+ D L +G E
Sbjct: 582 GAVVRGAATKIAMEEEYNINFGPQEVENILGAPIYDKDLYEGNEF--------------- 626
Query: 600 NTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAM 659
G+ GL WT GG++ F+EA+
Sbjct: 627 ------------------------------------AGVVTGLAWTQVGGDILFIEASLS 650
Query: 660 RGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVP 719
GKG++ LTG LGDV+KESA IA+ ++RA A + + + D+HIH PAGA P
Sbjct: 651 PGKGKMSLTGNLGDVMKESASIAMAYIRAHAEEFGI----DYKIFDQWDVHIHVPAGATP 706
Query: 720 KDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRV 779
KDGPSAG+T++TAL S F+++ V+ AMTGE+TLRG VLPVGG+++KILAA R IK V
Sbjct: 707 KDGPSAGITMLTALTSAFTQRMVKPHLAMTGEITLRGKVLPVGGIQEKILAAKRANIKDV 766
Query: 780 ILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
IL + N KD++E+ + + L M +V++ A
Sbjct: 767 ILCKSNKKDILEIKESYIKDLNFHYVSEMSEVIKLAL 803
>gi|392391678|ref|YP_006428281.1| ATP-dependent protease La [Ornithobacterium rhinotracheale DSM
15997]
gi|390522756|gb|AFL98487.1| ATP-dependent protease La [Ornithobacterium rhinotracheale DSM
15997]
Length = 801
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/768 (41%), Positives = 465/768 (60%), Gaps = 68/768 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ + L ++ P+G +T V+L+GL RF + E+ T Y+ A+I+ LE E +
Sbjct: 100 GSVAKIIKL---IKMPNGNIT--VILQGLRRFELVEMLTENPYFIAKINLLE----EEKP 150
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFE 168
E D + L K ++ + + G +E+ L + ++ ++ +
Sbjct: 151 KEDDVVYNTLIDSIKEISLRIAKINPNMPSEAGYAINSIESPSF--LVNFVSSNIDLDLK 208
Query: 169 EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIK 228
E+ +L+ D K R A E ++ LQ + KI + ++ + Q+E+ L QQ+RAI+
Sbjct: 209 EKQKLLEENDQKERAMLALEHLNTALQKQELKNKIHSRAHKEMDQQQREYFLNQQIRAIQ 268
Query: 229 EELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELI 288
EELGD EDD L+++ + I K KEL RL+++ PQ P Y+ R YL+L+
Sbjct: 269 EELGDFSA-EDDFQELKKRAKKQIWKEEIAKTFNKELNRLRRLNPQSPDYSIQRNYLDLM 327
Query: 289 ADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGP 348
LPW+K S++ LD+ A++ L+ DHYGL +VK+RI+EYLAV KLK D + P++C GP
Sbjct: 328 LSLPWDKVSQD-KLDIAYAEKVLNKDHYGLQKVKERILEYLAVLKLKGDMKSPIICLYGP 386
Query: 349 PGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCN 408
PGVGKTSL SIA+AL R + R+SLGG+ DE++IRGHR+TY+G+MPGR++ +K+ G N
Sbjct: 387 PGVGKTSLGRSIATALNRSYQRMSLGGMHDESEIRGHRKTYLGAMPGRILQNIKKAGFSN 446
Query: 409 PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQP 468
PV +LDEIDK G GDP+SA+LEVLDPEQN +F D+YL + +DLS+V+F+ATAN
Sbjct: 447 PVFVLDEIDKLGQGNHGDPSSAMLEVLDPEQNTSFYDNYLEIGYDLSRVLFIATANNIAN 506
Query: 469 IPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYT 528
IP PL DRME+IE+ GYT EEK+ IA RHL+P+ L +HGL +++ + + +I YT
Sbjct: 507 IPSPLRDRMEMIEVNGYTVEEKVEIAKRHLVPKQLTEHGLPKNAIRLGKKELAFIIDGYT 566
Query: 529 REAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEV 588
RE+GVR LE+ +A L R A A +E EV
Sbjct: 567 RESGVRGLEKRIAKLVRNIAKDTA-------------------------------MEKEV 595
Query: 589 IPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFG 648
P ++T A +E++LG PR +++ E PG+ GL WT G
Sbjct: 596 DP------------KMTI------ARIEEILGVPR--EKDKYENNNVPGVVTGLAWTQVG 635
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
G++ F+E+ GKG+L +TG LG V+KESAQIAL +V+A L + +E L++ +
Sbjct: 636 GDILFIESILSNGKGQLSMTGNLGKVMKESAQIALEYVKAHHEKLGIDSE----LIEKSN 691
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
+H+H P GAVPKDGPSAG+T++T++VS F++++V+ + AMTGE+TLRG VLPVGG+K+KI
Sbjct: 692 VHVHVPEGAVPKDGPSAGITMLTSIVSTFTKRKVKKNIAMTGEITLRGKVLPVGGIKEKI 751
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LAA R GIK +IL +N KD+ E+ + L +MEDVL+ A
Sbjct: 752 LAAKRAGIKEIILCVQNKKDIEEIEPEYIKGLTFHYVDKMEDVLDIAL 799
>gi|378825567|ref|YP_005188299.1| endopeptidase La (ATP-dependent protease La 1) [Sinorhizobium
fredii HH103]
gi|365178619|emb|CCE95474.1| endopeptidase La (ATP-dependent protease La 1) [Sinorhizobium
fredii HH103]
Length = 805
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 329/790 (41%), Positives = 462/790 (58%), Gaps = 75/790 (9%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ A+D + I+ G A L L ++ P G V V++EG R + ++R
Sbjct: 56 TQINATDDDPEASAIY--RVGTIANVLQL---LKLPDGTVK--VLVEGRARAEIDRYTSR 108
Query: 89 GTYYTARISSLEMTKIEMEQVEQDP-DFIALSRQFKATAMELISVLEQKQKTGGRTKVLL 147
+Y A L + E+DP + ALSR + E S ++ +K +
Sbjct: 109 DDFYEAVAHVLR-------EPEEDPVEIEALSR---SVVSEFESYVKLNKKISPEVVGVA 158
Query: 148 ETVPIH-KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQK 206
+ + KLAD + I E+ ML++ +K+RL KA ++ + ++V ++I +
Sbjct: 159 SQIDDYSKLADTVASHLSIKIVEKQEMLETTSVKMRLEKALGFMEGEISVLQVEKRIRSR 218
Query: 207 VEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELR 266
V+ Q+ K+Q+E+ L +QM+AI++ELGD++D D++ +E ++ + + EL+
Sbjct: 219 VKRQMEKTQREYYLNEQMKAIQKELGDSEDGRDEMAEIEERIAKTKLSKEAREKADAELK 278
Query: 267 RLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRII 326
+L++M P T R YL+ + LPW K S+ I DL A++ L++DH+GL +VK+RI+
Sbjct: 279 KLRQMSPMSAEATVVRNYLDWLLGLPWGKKSK-IKTDLNHAEKVLEADHFGLDKVKERIV 337
Query: 327 EYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHR 386
EYLAV+ +GP+LC VGPPGVGKTSLA SIA A GR++IR++LGGV+DEA+IRGHR
Sbjct: 338 EYLAVQARSAKIKGPILCLVGPPGVGKTSLAKSIAKATGREYIRMALGGVRDEAEIRGHR 397
Query: 387 RTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDH 446
RTYIGSMPG+++ +K+ NP+ LLDE+DK G D RGDP+SALLEVLDPEQN TF DH
Sbjct: 398 RTYIGSMPGKIVQSMKKAKRANPLFLLDEVDKMGQDFRGDPSSALLEVLDPEQNSTFMDH 457
Query: 447 YLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQH 506
YL V +DLS V+F+ TAN IPPPL+DRMEVI + GYT EEKL IA RHL+P+ + H
Sbjct: 458 YLEVEYDLSSVMFITTANTLN-IPPPLMDRMEVIRIAGYTEEEKLEIAKRHLLPKAIRDH 516
Query: 507 GLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDV 566
L + + + VIQ YTREAGVRN ER L LAR A ++ + + ++ ++ +V
Sbjct: 517 ALQPNEFSVTDGALMAVIQTYTREAGVRNFERELMKLARKAVTEILKGKTKKVDVTADNV 576
Query: 567 HRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDD 626
+ LG PRF
Sbjct: 577 N-------------------------------------------------DYLGVPRFRH 587
Query: 627 REAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWV 686
E AER G+ GL WT GGE+ +E M GKG + +TG L DV+KES A ++V
Sbjct: 588 GE-AERDDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYV 646
Query: 687 RARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADT 746
R+RA D + L RDIH+H P GA PKDGPSAGV + TA+VS+ + + D
Sbjct: 647 RSRAIDFGIEPP----LFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVMTGIPIHKDV 702
Query: 747 AMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAK 806
AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL E+P V SLEII
Sbjct: 703 AMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLAEIPDNVKNSLEIIPVS 762
Query: 807 RMEDVLEQAF 816
RM +VLE A
Sbjct: 763 RMGEVLEHAL 772
>gi|440288749|ref|YP_007341514.1| ATP-dependent protease La [Enterobacteriaceae bacterium strain FGI
57]
gi|440048271|gb|AGB79329.1| ATP-dependent protease La [Enterobacteriaceae bacterium strain FGI
57]
Length = 784
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 330/765 (43%), Positives = 461/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGEHFSAKAEYLESPDIEEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDINERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKKGELTVDDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L + G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLK-------HIDINGDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
H+ LG RFD A + G GL WT GG++ +E
Sbjct: 576 HD--------------------YLGVQRFDYGRADDENRV-GQVTGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHF 713
+ GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H
Sbjct: 615 TACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL E+P VLA L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPDENKRDLEEIPDNVLADLDIHPVKRIEEVLALALQN 773
>gi|383770383|ref|YP_005449446.1| ATP-dependent protease LA [Bradyrhizobium sp. S23321]
gi|381358504|dbj|BAL75334.1| ATP-dependent protease LA [Bradyrhizobium sp. S23321]
Length = 800
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 318/764 (41%), Positives = 464/764 (60%), Gaps = 69/764 (9%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ R + P G T+ +V +G+ R + + + AR + E P+
Sbjct: 90 NIVRYITAPDG--THHIVCQGVQRARILDFLPGTPFLAARFQQIP------EPTTSSPEI 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
A + + A+E I +L Q + T LAD+ + +I +++ +L+
Sbjct: 142 EARALNLQRLAIEAIELLPQAPPE--LVAMFQSTTAPGALADLATSFMDIKPQDKQEVLE 199
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
++DL +R+ K ++ + L+ +R++ +I QK + Q+E +LR+QM I+ +LG+ D
Sbjct: 200 TIDLTLRVEKVSKHLAERLEVLRISNEIGQKTRASFDERQREAILREQMATIQRQLGEGD 259
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELIADLPWE 294
++ L + A MP H +KELRR ++M P+ G R YL+ + DLPW
Sbjct: 260 GKAAEVAELTAAITKANMPPEADAHARKELRRYERM-PEAAGEAGMVRTYLDWLIDLPWA 318
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKT 354
+E+ +D+K A+ LD+DH+GL ++K RIIEYLAVRKL P + P+LCFVGPPGVGKT
Sbjct: 319 LPAEK-PIDIKEARRILDADHFGLEKIKTRIIEYLAVRKLAPQGKAPILCFVGPPGVGKT 377
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
SL SIA A+ R F+R+SLGGV DEA+IRGHRRTYIG++PG +I G+K+ G N VM+LD
Sbjct: 378 SLGQSIARAMDRPFVRVSLGGVHDEAEIRGHRRTYIGALPGNIIQGIKKAGARNCVMMLD 437
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
EIDK G V+GDP++A+LEVLDPEQN TF D+YL VPFDLS+V+F+ATAN IP PLL
Sbjct: 438 EIDKMGRGVQGDPSAAMLEVLDPEQNGTFQDNYLAVPFDLSRVVFIATANMLDQIPGPLL 497
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRME+I L GYT +EKL IA R+L+ R L+ +GL +E +I +KLV++ YTREAGVR
Sbjct: 498 DRMELISLAGYTEDEKLEIAKRYLVRRQLEANGLTAEQAEITPEALKLVVKGYTREAGVR 557
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGE 593
NLER + + R AAV+VAE + + + KD+ LG P + +A
Sbjct: 558 NLEREIGKVFRHAAVQVAEGSAAKVVVTPKDIATVLGQPRFEGEIA-------------- 603
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
+R + PG++ GL WT GG++ F
Sbjct: 604 -------------------------------------QRTSIPGVATGLAWTPVGGDILF 626
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+EA+ + G+G + LTGQLG+V++ES Q ALT V+++A L + + + + DIH+H
Sbjct: 627 IEASRVPGRGGMILTGQLGEVMRESVQAALTLVKSKAPQLGIDPQ----VFEKSDIHVHV 682
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
PAGA PKDGPSAGV + TAL SL + + VR+DTAMTGE++LRGLVLPVGG+K+K++AA
Sbjct: 683 PAGATPKDGPSAGVAMFTALTSLLTNRTVRSDTAMTGEISLRGLVLPVGGIKEKVVAAAA 742
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
G+KRV+LP RN +D ++P + +LE I +R+++ + A E
Sbjct: 743 AGLKRVMLPARNKRDYDDIPQSARDNLEFIWLERVDEAIAAALE 786
>gi|398824525|ref|ZP_10582852.1| ATP-dependent protease La [Bradyrhizobium sp. YR681]
gi|398224772|gb|EJN11067.1| ATP-dependent protease La [Bradyrhizobium sp. YR681]
Length = 805
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 318/764 (41%), Positives = 465/764 (60%), Gaps = 69/764 (9%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ R + P G T+ +V +G+ R + + + AR + E P+
Sbjct: 91 NIVRYITAPDG--THHIVCQGVQRARILDFLPGTPFPVARFQQIP------EPTTSSPEI 142
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
A + + A+E I +L Q + T LAD+ + +I +++ +L+
Sbjct: 143 EARALNLQRQAIEAIELLPQAPPE--LVAMFQSTTAPGALADLATSFMDIKPQDKQEVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
++DL +R+ K ++ + L+ +R++ +I QK + Q+E +LR+QM I+ +LG+ D
Sbjct: 201 TIDLTLRVEKVSKHLAERLEVLRISNEIGQKTRATFDERQREAILREQMATIQRQLGEGD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELIADLPWE 294
++ L + A MP H +KELRR ++M P+ G + R YL+ + +LPW
Sbjct: 261 GKAAEVAELTAAITKASMPPEADAHARKELRRYERM-PEAAGESGMVRTYLDWLIELPWA 319
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKT 354
+E+ +D+K A+ LD+DH+GL ++K RIIEYLAVRKL P + P+LCFVGPPGVGKT
Sbjct: 320 LPAEK-PIDIKEARRILDADHFGLEKIKSRIIEYLAVRKLAPQGKAPILCFVGPPGVGKT 378
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
SL SIA A+ R F+R+SLGGV DEA+IRGHRRTYIG++PG +I G+K+ G N VM+LD
Sbjct: 379 SLGQSIARAMDRPFVRVSLGGVHDEAEIRGHRRTYIGALPGNIIQGIKKAGSRNCVMMLD 438
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
EIDK G V+GDP++A+LEVLDPEQN TF D+YL VPFDLS+V+F+ATAN IP PLL
Sbjct: 439 EIDKMGRGVQGDPSAAMLEVLDPEQNGTFRDNYLGVPFDLSRVVFIATANMLDQIPGPLL 498
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRME+I L GYT +EKL IA R+L+ R L+ +GL +E +I +KLV++ YTREAGVR
Sbjct: 499 DRMELISLAGYTEDEKLEIAKRYLVRRQLEANGLTAEQAEIEPEALKLVVKGYTREAGVR 558
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGE 593
NLER + + R AAV+VAE + + + KD+ LG P + +A
Sbjct: 559 NLEREIGKVFRHAAVQVAEGSAAKVVVTPKDIATVLGQPRFEGEIA-------------- 604
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
+R + PG++ GL WT GG++ F
Sbjct: 605 -------------------------------------QRTSIPGVATGLAWTPVGGDILF 627
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+EA+ + G+G + LTGQLG+V++ES Q ALT V+++A L + +L + DIH+H
Sbjct: 628 IEASRVPGRGGMILTGQLGEVMRESVQAALTLVKSKAPQLGI----DQSLFEKSDIHVHV 683
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
PAGA PKDGPSAGV + TAL SL + + VR+DTAMTGE++LRGLVLPVGG+K+K++AA
Sbjct: 684 PAGATPKDGPSAGVAMFTALTSLLTNRTVRSDTAMTGEISLRGLVLPVGGIKEKVVAAAA 743
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
G+KRV+LP RN +D ++P + +LE I +R+++ + A E
Sbjct: 744 AGLKRVMLPARNKRDYDDIPKSARDNLEFIWLERVDEAIAAALE 787
>gi|227113467|ref|ZP_03827123.1| DNA-binding ATP-dependent protease La [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
gi|403057521|ref|YP_006645738.1| DNA-binding ATP-dependent protease La [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402804847|gb|AFR02485.1| DNA-binding ATP-dependent protease La [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 793
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 329/766 (42%), Positives = 463/766 (60%), Gaps = 85/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAHAEYLDSPAIDEREQEVLMRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRGRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIDAAKMPKDAREKAEAELQKLKMMSPMSAEATVVRSYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD+DHYGL RVK+RI+EYLAV+ RGP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLLKAQEMLDTDHYGLDRVKERILEYLAVQSRVSKIRGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKNGELSVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ + M +ST
Sbjct: 544 LEREISKLCRKA--------------------------------------VKTLLMDKST 565
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAE--RVAAPGISVGLVWTNFGGEVQF 653
+ + L+ LG RFD A + RV G GL WT GG++
Sbjct: 566 KHIQ----------ISGDNLKDFLGVQRFDYGRADDENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
GIK V++P+ N +DL ++P V+A LEI KR+E+VL A +
Sbjct: 729 GGIKTVLIPDDNKRDLEDIPQNVIADLEIHPVKRIEEVLALALQNA 774
>gi|330829916|ref|YP_004392868.1| ATP-dependent protease La [Aeromonas veronii B565]
gi|406676846|ref|ZP_11084031.1| lon protease [Aeromonas veronii AMC35]
gi|423201787|ref|ZP_17188366.1| lon protease [Aeromonas veronii AER39]
gi|423209384|ref|ZP_17195938.1| lon protease [Aeromonas veronii AER397]
gi|328805052|gb|AEB50251.1| ATP-dependent protease La [Aeromonas veronii B565]
gi|404615734|gb|EKB12693.1| lon protease [Aeromonas veronii AER39]
gi|404617242|gb|EKB14178.1| lon protease [Aeromonas veronii AER397]
gi|404625160|gb|EKB21977.1| lon protease [Aeromonas veronii AMC35]
Length = 784
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 310/664 (46%), Positives = 429/664 (64%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + E++ +L+ V + R+ +++ + ++V ++I +V+ Q+ K
Sbjct: 164 RLADTMAAHMPLKLEDKQKVLEIVSVSERIEFLMAMMESEIDLLQVEKRIRTRVKKQMEK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELG+ +D D+ AL RK++ AGMP + + Q EL +LK M P
Sbjct: 224 SQREYYLNEQMKAIQKELGELEDSPDEFEALNRKIEEAGMPEDAREKAQAELAKLKMMSP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + +PW KA ++ DL A+E LD+DHYGL +VK RI+EYLAV+
Sbjct: 284 MSAEATVVRSYVDWMVQVPW-KARSKVKKDLGKAQEVLDADHYGLEKVKDRILEYLAVQA 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 343 RVNKLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSM 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG+LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN +FNDHYL V +D
Sbjct: 403 PGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNNSFNDHYLEVDYD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + + ++GL +
Sbjct: 463 LSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLVAKQIQRNGLKESEI 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
I ++ + VI+ YTREAGVR+LER ++ + R A ++ L
Sbjct: 522 TIEDSALVGVIRYYTREAGVRSLEREISKICRKAVKRI---------------------L 560
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LD + + V++ L++ LG RFD +A ++
Sbjct: 561 LDKSIKH---------------------------VQVNQENLKEFLGVQRFDYGKATDQN 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG++ +E T M GKG+L TG LGDV++ES Q A+T VRARA L
Sbjct: 594 QV-GQVCGLAWTEVGGDLLTIETTNMPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEKL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
++ A + + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+T
Sbjct: 653 RINA----DFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVRADVAMTGEIT 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAAHR GIKRV++P+ N +DL E+PA V LEI + +++VLE
Sbjct: 709 LRGEVLPIGGLKEKLLAAHRGGIKRVLIPKENERDLEEIPANVKQDLEIYPVRWIDEVLE 768
Query: 814 QAFE 817
A +
Sbjct: 769 LALQ 772
>gi|253687445|ref|YP_003016635.1| ATP-dependent protease La [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754023|gb|ACT12099.1| ATP-dependent protease La [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 793
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 327/763 (42%), Positives = 463/763 (60%), Gaps = 81/763 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDGGEHFAAKAEYLDSPAIDEREQEVLMRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRGRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIEAAKMPKDAREKAEAELQKLKMMSPMSAEATVVRSYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD+DHYGL RVK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLLKAQEMLDTDHYGLDRVKERILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKNGELSVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ + M +ST
Sbjct: 544 LEREISKLCRKA--------------------------------------VKTLLMDKST 565
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
+ V L+ LG RFD A + G GL WT GG++ +E
Sbjct: 566 KHIQ----------VSGDNLKDFLGVQRFDYGRADDENRV-GQVTGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H P
Sbjct: 615 TACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINA----DFYEKRDIHVHVPE 670
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR G
Sbjct: 671 GATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHRGG 730
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
IK V++P+ N +DL ++P V+A LEI KR+E+VL A +
Sbjct: 731 IKTVLIPDDNKRDLEDIPQNVIADLEIHPVKRIEEVLALALQN 773
>gi|400756438|ref|NP_951977.4| ATP-dependent Lon protease (La) [Geobacter sulfurreducens PCA]
gi|399107749|gb|AAR34250.2| ATP-dependent Lon protease (La) [Geobacter sulfurreducens PCA]
Length = 772
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 307/664 (46%), Positives = 427/664 (64%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ + +EQ +L++VD RL K + +Q ++V ++ +V ++ K
Sbjct: 164 RLADLVALYVNLPLDEQQRLLETVDPLERLKKVYMHLTAEVQRLQVKGEVQAEVTRRVGK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQKE+LLR+QM+ I+EELG+ D ++ L ++Q+AGMP + K KEL+RL ++ P
Sbjct: 224 SQKEYLLREQMKQIQEELGEEDPRGTEMTELRSRIQNAGMPDEVRKIADKELKRLDRINP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
P YT +R YL+ +A +PW +++ + + D+ A+ LD DHY L +VK+RI+EYLAVR
Sbjct: 284 SSPEYTVARTYLDYLAGMPWGRSTAD-NHDINQAEAVLDEDHYDLKKVKERILEYLAVRT 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L+ +GP+LCFVGPPGVGKTSL SIA ALGRKFIR+SLGG++DEA+IRGHRRTYIG++
Sbjct: 343 LRERMKGPILCFVGPPGVGKTSLGKSIARALGRKFIRMSLGGMRDEAEIRGHRRTYIGAL 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I + R G NPV +LDE+DK G D RGDPASALLEVLDPEQN TF DHYL+VPFD
Sbjct: 403 PGRIIQEIFRCGSNNPVFMLDEVDKIGLDFRGDPASALLEVLDPEQNSTFTDHYLDVPFD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+F+ TAN P+P L DRMEVI L GYT EEK +IA+R+LIP+ ++++GL +
Sbjct: 463 LSNVMFITTANLLDPVPAALKDRMEVIRLSGYTDEEKEKIAVRYLIPKEVEENGLSATPP 522
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
A + +I YTREAGVRNL+R++A++ R A ++ + G PL
Sbjct: 523 AFASAAIYKIIGDYTREAGVRNLQRSIASVCRKVAKEITQ----------------GKPL 566
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
+ +P VV+E LGP F + AAE+
Sbjct: 567 RET----------------------------ITPEVVEE-----FLGPRTFFNEVAAEQD 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL WT GG++ FVEAT M+GK +L LTG LGDV+KESA+ AL++VRA D
Sbjct: 594 RV-GVVTGLAWTETGGDILFVEATRMKGKRDLILTGSLGDVMKESARTALSYVRATCADW 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ ++G + D+HIH PAGA+PKDGPSAG+T+VTA+VSL S + R D AMTGE++
Sbjct: 653 GI--DEGA--FEDSDLHIHVPAGAIPKDGPSAGLTMVTAIVSLLSGRPARRDVAMTGEIS 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
L G L +GG+K+K+LAA R G+K V+ P RN ++L ++P V L I + + +
Sbjct: 709 LTGRALAIGGLKEKVLAARRAGVKTVVAPSRNRENLEDIPDDVKNELTFIFVDDVHEAVA 768
Query: 814 QAFE 817
A +
Sbjct: 769 AALQ 772
>gi|6175841|gb|AAF05300.1|AF167159_1 Lon protease [Sinorhizobium meliloti]
Length = 806
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 323/789 (40%), Positives = 457/789 (57%), Gaps = 73/789 (9%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ A+D + I+ G A L L ++ P G V V++EG R ++ + R
Sbjct: 57 TQINATDDDPEPSAIY--KVGTIANVLQL---LKLPDGTVK--VLVEGRSRAEIERYTPR 109
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT-KVLL 147
+Y A +L E D D + + ++ E S ++ +K V
Sbjct: 110 DDFYEAMAHALP---------EPDEDPVEIEALSRSVVSEFESYVKLNKKISPEVVGVAS 160
Query: 148 ETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKV 207
+ KLAD + I E+ ML++ +K+RL KA ++ + ++V ++I +V
Sbjct: 161 QIEDYSKLADTVASHLSIKIVEKQEMLETTSVKMRLEKALGFMEGEISVLQVEKRIRSRV 220
Query: 208 EGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
+ Q+ K+Q+E+ L +QM+AI++ELGD++D D++ LE ++ + EL++
Sbjct: 221 KRQMEKTQREYYLNEQMKAIQKELGDSEDGRDEMAELEERISKTKFSKEAREKADAELKK 280
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
L++M P T R YL+ + LPW K S+ I DL A++ LD+DH+GL +VK+RI+E
Sbjct: 281 LRQMSPMSAEATVVRNYLDWLLGLPWGKKSK-IKTDLNHAEKVLDTDHFGLDKVKERIVE 339
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAV+ +GP+LCFVGPPGVGKTSLA SIA A GR++IR++LGGV+DEA+IRGHRR
Sbjct: 340 YLAVQARSSKIKGPILCFVGPPGVGKTSLAKSIAKATGREYIRMALGGVRDEAEIRGHRR 399
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN TF DHY
Sbjct: 400 TYIGSMPGKVVQSMKKAKKSNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNSTFMDHY 459
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
L V +DLS V+F+ TAN IPPPL+DRMEV + GYT EEKL IA RHL+P+ + H
Sbjct: 460 LEVEYDLSNVMFITTANTLN-IPPPLMDRMEVFRIAGYTEEEKLEIAKRHLLPKAIRDHA 518
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + + + + +IQ YTREAGVRN ER L LAR A ++ + + ++ S+++++
Sbjct: 519 LQTNEFSVTDGALTAIIQNYTREAGVRNFERELMKLARKAVTEILKGKTKKVEVSAENIN 578
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDR 627
LG PRF
Sbjct: 579 -------------------------------------------------DYLGVPRFRHG 589
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E AER G+ GL WT GGE+ +E M GKG + +TG L DV+KES A ++VR
Sbjct: 590 E-AERDDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYVR 648
Query: 688 ARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTA 747
+RA D + L RDIH+H P GA PKDGPSAGV + TA+VS+ + + D A
Sbjct: 649 SRAIDFGIEPP----LFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVMTGIPISKDVA 704
Query: 748 MTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKR 807
MTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KD+ ++P V S EII R
Sbjct: 705 MTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDIADIPDNVKNSFEIIPVSR 764
Query: 808 MEDVLEQAF 816
M +V+ A
Sbjct: 765 MGEVIAHAL 773
>gi|409911477|ref|YP_006889942.1| ATP-dependent Lon protease (La) [Geobacter sulfurreducens KN400]
gi|298505049|gb|ADI83772.1| ATP-dependent Lon protease (La) [Geobacter sulfurreducens KN400]
Length = 772
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 307/664 (46%), Positives = 427/664 (64%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ + +EQ +L++VD RL K + +Q ++V ++ +V ++ K
Sbjct: 164 RLADLVALYVNLPLDEQQRLLETVDPLERLKKVYMHLTAEVQRLQVKGEVQAEVTRRVGK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQKE+LLR+QM+ I+EELG+ D ++ L ++Q+AGMP + K KEL+RL ++ P
Sbjct: 224 SQKEYLLREQMKQIQEELGEEDPRGTEMTELRSRIQNAGMPDEVRKIADKELKRLDRINP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
P YT +R YL+ +A +PW +++ + + D+ A+ LD DHY L +VK+RI+EYLAVR
Sbjct: 284 SSPEYTVARTYLDYLAGMPWGRSTAD-NHDINQAEAVLDEDHYDLKKVKERILEYLAVRT 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L+ +GP+LCFVGPPGVGKTSL SIA ALGRKFIR+SLGG++DEA+IRGHRRTYIG++
Sbjct: 343 LRERMKGPILCFVGPPGVGKTSLGKSIARALGRKFIRMSLGGMRDEAEIRGHRRTYIGAL 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I + R G NPV +LDE+DK G D RGDPASALLEVLDPEQN TF DHYL+VPFD
Sbjct: 403 PGRIIQEIFRCGSNNPVFMLDEVDKIGLDFRGDPASALLEVLDPEQNSTFTDHYLDVPFD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+F+ TAN P+P L DRMEVI L GYT EEK +IA+R+LIP+ ++++GL +
Sbjct: 463 LSNVMFITTANLLDPVPAALKDRMEVIRLSGYTDEEKEKIAVRYLIPKEVEENGLSATPP 522
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
A + +I YTREAGVRNL+R++A++ R A ++ + G PL
Sbjct: 523 AFASAAIYKIIGDYTREAGVRNLQRSIASVCRKVAKEITQ----------------GKPL 566
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
+ +P VV+E LGP F + AAE+
Sbjct: 567 RET----------------------------ITPEVVEE-----FLGPRTFFNEVAAEQD 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL WT GG++ FVEAT M+GK +L LTG LGDV+KESA+ AL++VRA D
Sbjct: 594 RV-GVVTGLAWTETGGDILFVEATRMKGKRDLILTGSLGDVMKESARTALSYVRATCADW 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ ++G + D+HIH PAGA+PKDGPSAG+T+VTA+VSL S + R D AMTGE++
Sbjct: 653 GI--DEGA--FEDTDLHIHVPAGAIPKDGPSAGLTMVTAIVSLLSGRPARRDVAMTGEIS 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
L G L +GG+K+K+LAA R G+K V+ P RN ++L ++P V L I + + +
Sbjct: 709 LTGRALAIGGLKEKVLAARRAGVKTVVAPSRNRENLEDIPDDVKNELTFIFVDDVHEAVA 768
Query: 814 QAFE 817
A +
Sbjct: 769 AALQ 772
>gi|308070421|ref|YP_003872026.1| ATP-dependent protease La [Paenibacillus polymyxa E681]
gi|305859700|gb|ADM71488.1| ATP-dependent protease La [Paenibacillus polymyxa E681]
Length = 778
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 318/765 (41%), Positives = 459/765 (60%), Gaps = 89/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPD--------- 114
P+G T V++EGL R + + + YY L E E V+ + D
Sbjct: 84 PNG--TIRVLVEGLERAEIIQYTDNEEYYEVMAKELH----EAENVQPETDALMRTVLTQ 137
Query: 115 ---FIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQL 171
+I LS++ + +S +E+ GR LAD+ + + +E+
Sbjct: 138 FEHYINLSKKVTPETLAAVSDIEEP----GR------------LADVITSHLTLKIKEKQ 181
Query: 172 VMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL 231
+L+++D+ RL K ++++ + + + KI Q+V+ Q+ K+QKE+ LR+QM+AI++EL
Sbjct: 182 DILETIDVTQRLEKLLDILNNEREVLELERKINQRVKKQMEKTQKEYYLREQMKAIQKEL 241
Query: 232 GDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADL 291
G+ + ++ L ++ +P ++ + V+KE+ RL+KM R Y++ + L
Sbjct: 242 GEKEGRAGEVEELRNQLSELELPVSVKEKVEKEIDRLEKMPASSAEGGVIRNYVDWLLSL 301
Query: 292 PWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGV 351
PW K +++ DLD+ A+E L++DHYGL + K+R++EYLAVRKL +GP+LC VGPPGV
Sbjct: 302 PWNKFTDD-DLDIVKAEEVLNNDHYGLDKPKERVLEYLAVRKLVKTIKGPILCLVGPPGV 360
Query: 352 GKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVM 411
GKTSLA SIA ++GR+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV
Sbjct: 361 GKTSLARSIAKSMGREFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGTSNPVF 420
Query: 412 LLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPP 471
LLDEIDK SD RGDP++ALLEVLDPEQN TF+DH++ +PFDLS V+FV TAN A IP
Sbjct: 421 LLDEIDKMASDFRGDPSAALLEVLDPEQNNTFSDHFVELPFDLSNVMFVTTANAAHNIPR 480
Query: 472 PLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREA 531
PL+DRME + +PGYT EKL IA R+L+P+ +HGL E L I E + VI+ YTRE+
Sbjct: 481 PLMDRMETLYIPGYTELEKLEIANRYLLPKQKREHGLDEEQLVIGEDTLLRVIREYTRES 540
Query: 532 GVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPM 591
GVRNLE+ +A+L R AA V G E +++ P
Sbjct: 541 GVRNLEQQMASLCRKAAKSV---------------------------VSGGEGPIQITPD 573
Query: 592 GESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEV 651
L+ LG +F AE G GL WT GGE
Sbjct: 574 N----------------------LKDYLGIAKF-RYGVAELEDQIGTVTGLAWTEVGGET 610
Query: 652 QFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHI 711
+E T + G G+L LTG+LGDV+KESAQ A ++ R++A DL + ++ + DIHI
Sbjct: 611 LMIEVTVVPGSGKLILTGKLGDVMKESAQAAFSYTRSKAVDLGI----ELDFYEKNDIHI 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA+PKDGPSAG+T+ TAL+S + + V D AMTGE+TLRG VLP+GG+K+K LAA
Sbjct: 667 HIPEGAIPKDGPSAGITIATALISALTNRHVSKDVAMTGEITLRGRVLPIGGLKEKSLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
HR G K+++LP+ N +DL ++P ++ +E + M+ VL+ A
Sbjct: 727 HRAGYKKILLPKDNERDLKDIPDSIRQDVEFVPVAHMDQVLKHAL 771
>gi|431927410|ref|YP_007240444.1| ATP-dependent proteinase [Pseudomonas stutzeri RCH2]
gi|431825697|gb|AGA86814.1| ATP-dependent proteinase [Pseudomonas stutzeri RCH2]
Length = 798
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 336/774 (43%), Positives = 467/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R ++ + A +S +E ++E
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGVIERFVEVDDHCRAEVSLIEEAEVE--- 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
+R+ + L+S EQ + G + +VL I +L D A
Sbjct: 120 ----------ARESEVFTRSLLSQFEQYVQLGKKVPAEVLSSLNSIDEPARLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQQILEITDLAARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+ + + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDIDEGHNEVDELKKRIENAGLSKDAYAKAQAELNKLKQMSPMSAEATVVRT 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
Y++ + ++PW KA+ ++ LDL A+E LD+DHYGL VK RI+EYLAV+K +GPVL
Sbjct: 290 YIDWLVNVPW-KAASKVRLDLAKAEEVLDADHYGLEEVKDRILEYLAVQKRVKKLKGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA + RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIARSTNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ TA
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTA 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IP PLLDRMEVI LPGYT +EK+ IA R+L P+ ++ +GL L+ EA ++ +
Sbjct: 469 N-SMNIPAPLLDRMEVIRLPGYTEDEKINIATRYLAPKQIEANGLKKTELEFQEAAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR+LER LA + R KV ++
Sbjct: 528 IRYYTREAGVRSLERQLAKVCR----KVVKE----------------------------- 554
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
H F + VVD LE LG +F AE+ G GL
Sbjct: 555 ------------HAAEKRFHV----VVDADSLEHFLGIRKF-RYGLAEQQDQVGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG L TG LG+V+ ES ALT VR+RAT L + A +
Sbjct: 598 WTQVGGELLTIEAAVVPGKGRLTRTGSLGEVMGESITAALTVVRSRATSLGIAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ +DIHIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKQDIHIHVPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N +DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENQRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|304440712|ref|ZP_07400596.1| ATP-dependent protease La [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304370899|gb|EFM24521.1| ATP-dependent protease La [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 766
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/724 (43%), Positives = 440/724 (60%), Gaps = 63/724 (8%)
Query: 95 RISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHK 154
+ + +E+ E + +E + + AL R + E S ++QK G ++ + P
Sbjct: 103 KYTEVEVEVFESKDIEMNSNVEALVRLCEKDIQEY-SEMDQKMLPGMLDSLINKDTP-ET 160
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
+ D ++S E +L+ DL+ RL E+ + ++ +++ +I +V+ QL K
Sbjct: 161 MMDTACCYIDLSVENAQEILEVEDLEERLEIFHEIFSKEVELLKIEREIDTRVKSQLDKM 220
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
QKE+ L++Q+ IK+ELG+ + ++ +K++ +P I QKE+ +L + Q
Sbjct: 221 QKEYYLKEQLEVIKKELGEEKESDE----YTKKLEEKNLPEEIRARAQKEIEKLSTISVQ 276
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
P Y YL+ I DLPW ++EE ++D+K A++ LD +HYGL +VK+RI+E++AVRKL
Sbjct: 277 SPEYAVIMNYLDWIMDLPWNDSAEE-NIDIKNARKILDKEHYGLKKVKERILEFIAVRKL 335
Query: 335 KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
A+GP+LC VGPPGVGKTS+ASSIA AL + F+R+SLGGV DEA+IRGHRRTYIG+MP
Sbjct: 336 NKGAKGPILCLVGPPGVGKTSIASSIAHALDKNFVRMSLGGVTDEAEIRGHRRTYIGAMP 395
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
GR+I +K NPV L+DEIDK G++ RGDPAS LLEVLDP QNKTF DHY+ +PFDL
Sbjct: 396 GRVISLMKEAKQKNPVFLMDEIDKVGNNYRGDPASGLLEVLDPVQNKTFTDHYMELPFDL 455
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
S+V FV TAN IP PLLDRME+I L GYTP EK IA R+L+PR L + GL E +
Sbjct: 456 SEVFFVTTANTTSTIPGPLLDRMEIINLEGYTPNEKFNIAKRYLVPRQLKESGLSEENVT 515
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPL 573
I + ++ +I YTREAGVR LE+N++ + R AA+ + E E+E+ + K++++ LG +
Sbjct: 516 ISDGAIEDIIAYYTREAGVRTLEQNISKIIRKAAMNIVEGEKEKISITKKNLNKFLGEKI 575
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
L D E +V
Sbjct: 576 F---LFDLVNKENQV--------------------------------------------- 587
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL WT GG +EAT M+GKG L LTG LG+V+KESA A++++ A A
Sbjct: 588 ---GVVNGLAWTAVGGTTLTIEATVMKGKGNLTLTGSLGNVMKESATAAVSYIAANAEKF 644
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ ED Q DIHIH P GAVPKDGPSAGVT+ TALVS +++ VR D AMTGE+T
Sbjct: 645 N-IKED---FRQKNDIHIHVPEGAVPKDGPSAGVTITTALVSALTKRPVRRDVAMTGEIT 700
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAA R G+K VI+P+ N++DL E+ V LEII E V+E
Sbjct: 701 LRGRVLPIGGLKEKLLAAQRMGVKTVIIPKENIRDLNEIEDNVKNLLEIIPVSDAEKVIE 760
Query: 814 QAFE 817
A E
Sbjct: 761 IALE 764
>gi|85859382|ref|YP_461584.1| ATP-dependent protease La [Syntrophus aciditrophicus SB]
gi|85722473|gb|ABC77416.1| ATP-dependent protease La [Syntrophus aciditrophicus SB]
Length = 812
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/762 (41%), Positives = 467/762 (61%), Gaps = 81/762 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTK----IEMEQVEQD-----PD 114
P G V V++EG R +++E Y+ R+ +E + ++ E + + +
Sbjct: 90 PDGTVK--VLVEGKKRAAIKEYVPNEEYFFVRVEEIEDAENRNVVKTEALIRSLNAAFEN 147
Query: 115 FIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVML 174
++ LS++ + I+ ++ K LAD+ + + E++ +L
Sbjct: 148 YVKLSKKVHVEMVGTIAAIDDPSK----------------LADVISSHINLKLEDKQKIL 191
Query: 175 DSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDN 234
+ VD+ RL L+ ++ + V EKI ++V+ Q+ K+QK++ L +QMRAI++E+G+
Sbjct: 192 EIVDVNERLEAIYTLILSEIEILEVEEKIKRRVKKQMEKTQKDYYLNEQMRAIQKEMGEK 251
Query: 235 DDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWE 294
D+ ++++ LE++++ M K V++E+++L+ M P T R Y++ I D+PW
Sbjct: 252 DEFKNEIADLEKRLKQKKMSEEATKKVKQEIKKLQMMAPMSAEATVVRNYIDWILDMPWS 311
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKT 354
+ +E + LK ++ L+ DHYGL +VK+RI+EYLAV+ L +G +LC VGPPGVGKT
Sbjct: 312 EKTENV-YTLKQSEAILEEDHYGLEKVKERILEYLAVQMLVKKNKGSILCLVGPPGVGKT 370
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
S+A S+A A RKF+R+SLGGV+DEA+IRGHRRTYIG++PG+++ LK+ G NPV LD
Sbjct: 371 SIAKSVARATNRKFVRLSLGGVRDEAEIRGHRRTYIGALPGKIVQLLKKAGSNNPVFCLD 430
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
E+DK SD RGDP+SALLEVLDPEQN FND+YL V +DLS V+F+ TAN Q IP PL
Sbjct: 431 EVDKLSSDFRGDPSSALLEVLDPEQNYAFNDNYLEVDYDLSDVMFITTANVLQTIPAPLQ 490
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRMEVI + GYT EK+ IA R L+ + ++ +GL ++ ++ + ++ +I++YTREAGVR
Sbjct: 491 DRMEVIRIAGYTEPEKMNIAKRFLVHKEMEANGLTADNIEFTDGAIQTIIRQYTREAGVR 550
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGES 594
NLER +A++ R A E++ G
Sbjct: 551 NLEREIASICRKVA-------------------------------------REIVTSGG- 572
Query: 595 THEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFV 654
N RITS M+ K LG P+ E AE G++VGL WT GGE+ V
Sbjct: 573 ----KNKIRITS------KMVPKYLGVPKHRHGE-AEGKNEIGMTVGLAWTEVGGELLVV 621
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFP 714
EA+ ++G G+L +TG+LG+V++ESAQ ALT+VRARA L N + DIH+H P
Sbjct: 622 EASIVKGTGKLIMTGKLGEVMQESAQAALTYVRARADVFGLPE----NFYKEVDIHVHVP 677
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
GA+PKDGPSAG+ +VT++ S F +K+VR D AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 678 EGAIPKDGPSAGIAMVTSITSAFVKKKVRGDLAMTGEITLRGRVLPIGGLKEKLLAAHRA 737
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+K VI+P+ N KDL EVPA +L +LEII +++VL A
Sbjct: 738 NLKTVIIPKDNEKDLDEVPANILKALEIIRVDHVDEVLRVAL 779
>gi|421870975|ref|ZP_16302597.1| ATP-dependent protease La [Brevibacillus laterosporus GI-9]
gi|372459602|emb|CCF12146.1| ATP-dependent protease La [Brevibacillus laterosporus GI-9]
Length = 779
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 324/768 (42%), Positives = 456/768 (59%), Gaps = 89/768 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSL-----------EMTKIEMEQVEQD 112
P+G T V++EGL R S+ E + YY I+ L M + ++Q EQ
Sbjct: 83 PNG--TIRVLVEGLERASINEYLQKDDYYYVSITYLPETVENENEIEAMVRTVLQQFEQ- 139
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I +S++ + +S +++ GR +AD+ + + +++
Sbjct: 140 --YIKISKKVSPETLSSVSDIDE----AGR------------MADVIASHLPLKIKDKQD 181
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L++VD+ RL +++ + + + +I Q+V+ Q+ K+QKE+ LR+QM+AI++ELG
Sbjct: 182 VLEAVDVHRRLEILLNILNNEREVLELERRIGQRVKKQMEKTQKEYYLREQMKAIQKELG 241
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D D ++ L ++ + P I ++KEL RL KM + R Y++ + LP
Sbjct: 242 DRDGRNGEMDDLREQLLQSDAPERIKVKLEKELDRLDKMPATSAESSVVRTYIDTLLSLP 301
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W K +E+ +LD+ A+ LD DHYGL + K+RI+EYLAV+KL D +GP+LC VGPPGVG
Sbjct: 302 WTKKTED-NLDIAHAESILDEDHYGLEKPKERILEYLAVQKLVSDLKGPILCLVGPPGVG 360
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSL SIA A+GRKFIRISLGGV+DEA+IRGHRRTY+G+MPGR+I +++ G NPV+L
Sbjct: 361 KTSLGRSIARAMGRKFIRISLGGVRDEAEIRGHRRTYVGAMPGRIIQSMRQAGTVNPVIL 420
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK SD RGDPASALLEVLDP QN+ F+DHY+ +DLS VIF+ TAN IP P
Sbjct: 421 LDEIDKLASDFRGDPASALLEVLDPNQNEKFSDHYVEEVYDLSNVIFLTTANTLHTIPRP 480
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIP-EAMVKLVIQRYTREA 531
LLDRME IE+ GYT EK I +L+P+ + HG+ E LQ+ EAM+K VI++YTREA
Sbjct: 481 LLDRMETIEISGYTELEKFHIMQDYLLPKNIKSHGITKEKLQVADEAMMK-VIRQYTREA 539
Query: 532 GVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPM 591
GVRNL R A L R AA + E+++ + + K + L
Sbjct: 540 GVRNLNREAANLCRKAAKIIVSGEKKRVVVTPKTLENL---------------------- 577
Query: 592 GESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEV 651
LG PRF AE+ G GL WT GG+
Sbjct: 578 ---------------------------LGKPRF-RYGLAEKEDQVGSVTGLAWTQVGGDT 609
Query: 652 QFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHI 711
VE + GKG L LTGQLGDV+KESAQ AL+++R+RA + E L+ DIHI
Sbjct: 610 LNVEVSVYPGKGTLTLTGQLGDVMKESAQAALSYIRSRADQWDITQE----FLEKNDIHI 665
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA+PKDGPSAG+T+ TAL+S + VR + MTGE+TLRG VLP+GG+K+K+L+A
Sbjct: 666 HVPEGAIPKDGPSAGITMATALLSALTNIPVRKEVGMTGEITLRGRVLPIGGLKEKVLSA 725
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
HR G+ +ILP N KDL ++P +V + ++M+DV++ AF G
Sbjct: 726 HRAGLTTIILPIENEKDLEDIPESVKNDMTFHPVEQMDDVIKYAFVQG 773
>gi|187478783|ref|YP_786807.1| ATP-dependent protease La [Bordetella avium 197N]
gi|115423369|emb|CAJ49903.1| ATP-dependent protease La [Bordetella avium 197N]
Length = 775
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 334/799 (41%), Positives = 464/799 (58%), Gaps = 88/799 (11%)
Query: 26 ASKVQVGASDGKNQQEVIHW-HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQE 84
A K +VG D ++W +G AR L G + ++++G RF V E
Sbjct: 59 AKKDEVGPDD-------LYWVGTQGPIARYLTGQDG--------AHHLLVQGQSRFRVLE 103
Query: 85 LSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
Y AR+S +E T+ +VE A Q K +E I +L G
Sbjct: 104 FLEGWPYMVARVSLIEETQDSNSEVE------ARFLQLKQQTLEAIKLLPNVPDELGAVV 157
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
+E+ + LAD+ +I +E+ +L++ DL +RL + EL+ ++ +R++++I
Sbjct: 158 QGIESAGL--LADMVTNLVDIKPDEKQAILETFDLSLRLDRVIELLASRIEVLRLSKEIG 215
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
++ Q + Q+E +LR+Q+R I++ELGD +D +L L+ +++A MP + +H +KE
Sbjct: 216 ERTRAQFDERQRETMLREQLRQIQKELGDTEDTAAELEELKNAIEAASMPEEVLRHARKE 275
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
RL++M R YLE I +LPW++ ++ +DL A+ LD DH+GL +VK+R
Sbjct: 276 FSRLQRMGESSNESAMLRTYLEWITELPWKQEPQKA-IDLAEARTILDQDHFGLDKVKRR 334
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAVRKL P R P+LCF GPPGVGKTSL SIA A GR F R++LGGV DEA+IRG
Sbjct: 335 ILEYLAVRKLNPQGRSPILCFAGPPGVGKTSLGQSIARATGRAFQRVALGGVHDEAEIRG 394
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGS-DVRGDPASALLEVLDPEQNKTF 443
HRRTY+G++PG +I ++R G N V++LDEIDK GS GDP SALLEVLDPEQN F
Sbjct: 395 HRRTYLGALPGNIIQAMRRAGTSNAVIMLDEIDKLGSGGFHGDPGSALLEVLDPEQNHKF 454
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
D+YL V FDLS V+F+ TAN IP PL DRME+I+LPGYT EEK++IA R+L+ R L
Sbjct: 455 RDNYLAVDFDLSHVMFICTANALDTIPGPLRDRMEIIQLPGYTEEEKIQIARRYLVRRQL 514
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+ +GL E I +A + ++ YTREAGVR LER + ++ R A+++AE + E+ +
Sbjct: 515 EANGLTQEQASISDAALASIVGNYTREAGVRGLEREIGSVLRQVAMRIAEGQAERVAIDA 574
Query: 564 KDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP 622
D+ LG P +N +A R + P
Sbjct: 575 DDLAAILGPPRFENEVA----------------------LRTSVP--------------- 597
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
G++ GL WT GG++ F+EA+ + G G L LTGQLGDV+KESAQ A
Sbjct: 598 --------------GVATGLAWTPVGGDILFIEASKVPGNGRLILTGQLGDVMKESAQTA 643
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
LT + + D L+ DIHIH PAGA PKDGPSAGV + AL SL S K V
Sbjct: 644 LTLAKTWSGD----------SLEKLDIHIHVPAGATPKDGPSAGVAMFVALASLLSEKPV 693
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
A+ AMTGE++LRGLVLP+GGVK+K LAA R GIK V+LP RN +DL +VPA L
Sbjct: 694 SAEVAMTGEVSLRGLVLPIGGVKEKTLAALRAGIKVVMLPRRNQRDLDDVPAEARKKLRF 753
Query: 803 ILAKRMEDVLEQAFEGGCP 821
+L R+ED + A +G P
Sbjct: 754 VLLDRVEDAVACAIDGDLP 772
>gi|116748161|ref|YP_844848.1| ATP-dependent protease La [Syntrophobacter fumaroxidans MPOB]
gi|302425112|sp|A0LG61.1|LON2_SYNFM RecName: Full=Lon protease 2; AltName: Full=ATP-dependent protease
La 2
gi|116697225|gb|ABK16413.1| ATP-dependent protease La [Syntrophobacter fumaroxidans MPOB]
Length = 790
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 318/760 (41%), Positives = 460/760 (60%), Gaps = 88/760 (11%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
TY +++ + ++ +S G Y A +VE P+ + S + +A A+
Sbjct: 94 TYQIIVGASEKVRLRNISQAGDYLEA-------------EVEAVPEDRSTSPEIEALALN 140
Query: 129 LISVLEQKQKTGGRTKVLLETVPIH------------KLADIFVASFEISFEEQLVMLDS 176
L + G + V L ++P+ +L + +S E+ +L+
Sbjct: 141 L--------RMGFQKFVSLASLPLDLANFALNAERPMQLVYAVASHLALSVVERQSILEM 192
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+ K L T + R L+ + +A++I +V+ + K Q+++ LR+Q++AI++ELG+ +D
Sbjct: 193 PETKAALEHVTFYMTRQLEKLELAQRIQDRVKSVMDKRQRDYYLREQLQAIRKELGEGED 252
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+++ L +++ MP+ +KE+ RL +M P P Y SR YL+ + ++PW +
Sbjct: 253 TSEEVHELAARLRDLEMPAEARGAAEKEIERLGRMSPSAPEYHVSRNYLDWLLEMPWSVS 312
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
+E+ +D++ A LD DH+ L +VK+RI+EYLAV +LK D +GP+LCFVGPPGVGKTSL
Sbjct: 313 TED-RIDVRQAAVILDEDHFDLEKVKRRILEYLAVLQLKKDLKGPILCFVGPPGVGKTSL 371
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
SIA LGRKF+RISLGGV+DEA+IRGHRRTY+G++PGR++ GL+RVG NPV +LDEI
Sbjct: 372 GQSIARTLGRKFLRISLGGVRDEAEIRGHRRTYVGALPGRIVQGLRRVGSNNPVFMLDEI 431
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK G D RGDP+SALLEVLDPEQN +F+DHYL VPFDLS+V+F+AT N +P L DR
Sbjct: 432 DKIGMDFRGDPSSALLEVLDPEQNFSFSDHYLGVPFDLSRVMFIATGNLLDTVPAALKDR 491
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVIE+PGYT EEKL IA + L+ R HGL S+ ++I E + +I+ YTREAGVR+L
Sbjct: 492 MEVIEIPGYTAEEKLEIARKFLVERETANHGLTSDHIRIGEDAILEIIRSYTREAGVRSL 551
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
+RNLA++ R A +AE GA
Sbjct: 552 QRNLASVCRNTAKAIAE---------------------------GA-------------- 570
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
+ P+ +D + + ++LGP +F E A R GI+ GL WT GG++ F+E
Sbjct: 571 --------SGPIHIDASGIPEILGPVQFLP-ETATRSWGCGIATGLAWTPSGGQLIFIET 621
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
G G+L LTGQLG+V+KESA ALT+VRA A DL++ E+ DIH+H PAG
Sbjct: 622 LRTHGNGKLLLTGQLGEVMKESATAALTFVRAHAADLEIEGEE----FDRSDIHVHVPAG 677
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAG +V AL SL + + VR D AMTGE+TLRG +LPVGG+K+K+LAA R G+
Sbjct: 678 ATPKDGPSAGAPMVVALASLMTGREVRKDVAMTGEITLRGDILPVGGIKEKVLAARRAGV 737
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K +++P N+KDL ++P + + I + + DVL+ A
Sbjct: 738 KEIMIPHANMKDLADIPDHLRRDMTIHELQTISDVLQLAL 777
>gi|254560091|ref|YP_003067186.1| DNA-binding ATP-dependent protease La, induced by heat shock and
other stresses [Methylobacterium extorquens DM4]
gi|254267369|emb|CAX23204.1| DNA-binding ATP-dependent protease La, induced by heat shock and
other stresses [Methylobacterium extorquens DM4]
Length = 803
Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust.
Identities = 321/762 (42%), Positives = 463/762 (60%), Gaps = 65/762 (8%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ R + P G T+ + +G RF V + T+ AR+ + +I+ +VE
Sbjct: 97 NIVRYMTAPDG--THHAIFQGTQRFRVLDYLPGTTFPIARVLRISEPEIQTPEVE----- 149
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
A R ++ A+E + +L Q + L T L D+ A +I E++ +L+
Sbjct: 150 -ARFRHLQSRAVEALQLLPQAPQE--LITALQATTSPAALTDLAAAYMDIGPEQKQEILE 206
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+VDL R+ K L+ L+ +R+ +I + + + + Q+E +LR+QM AI+ +LG+ND
Sbjct: 207 TVDLIPRMDKVLRLLAERLEVLRLTNEIGLQTKAAIDERQREVILREQMAAIQRQLGEND 266
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
++ L + A MP + +KELRR ++M R YL+ + +LPW
Sbjct: 267 GRAQEVAELSEAITRAQMPEEVETQARKELRRYERMPEAAAEAGMIRTYLDWLIELPWAL 326
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
E+ +++ A++ LD+DH+GL ++K RIIEYLAVRKL P+ + P+LCFVGPPGVGKTS
Sbjct: 327 PKEK-PINIAEARQILDADHFGLEKIKARIIEYLAVRKLAPNGKAPILCFVGPPGVGKTS 385
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A+GR F+R+SLGGV DEA+IRGHRRTY+G+MPG +I +++ G + V++LDE
Sbjct: 386 LGQSIARAMGRSFVRVSLGGVHDEAEIRGHRRTYVGAMPGNIIQAVRKAGARDCVVMLDE 445
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK G ++GDP++A+LEVLDPEQN TF D+YL VPFDLS++ F+ATAN IP PL D
Sbjct: 446 IDKMGRGIQGDPSAAMLEVLDPEQNGTFRDNYLGVPFDLSRIAFIATANMLDTIPSPLRD 505
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EK IA R+LI R L+ +GL E +++ + + +I+ YTREAGVRN
Sbjct: 506 RMEVISLAGYTEDEKHEIARRYLIRRQLEANGLTPEQVEVEDQALTEMIRAYTREAGVRN 565
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER + L R AAV++AE S D R G +GE
Sbjct: 566 LEREIGRLFRHAAVRIAE--------GSADRVRFG--------------------VGE-- 595
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
L VLGPPRF++ E A R + PG++ GL WT GG++ F+E
Sbjct: 596 -------------------LASVLGPPRFEN-EVAMRTSVPGVATGLAWTPVGGDILFIE 635
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
AT G+G L LTGQLGDV++ESAQ AL+ V++RA L + + + DIH+H PA
Sbjct: 636 ATRAPGQGNLILTGQLGDVMRESAQAALSLVKSRAGALGI----DQAVFEKSDIHVHVPA 691
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAGV + AL SL + + VR+DTAMTGE++LRG+VLPVGG+K+K++AA G
Sbjct: 692 GATPKDGPSAGVAMFIALTSLLTDRCVRSDTAMTGEISLRGMVLPVGGIKEKVVAAAAAG 751
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+ RV+LP RN +D E+P + A+LE + + +E + +
Sbjct: 752 LSRVMLPARNRRDYEEIPPSARAALEFVWLENVEQAISAVLD 793
>gi|325922710|ref|ZP_08184450.1| ATP-dependent proteinase [Xanthomonas gardneri ATCC 19865]
gi|325546827|gb|EGD17941.1| ATP-dependent proteinase [Xanthomonas gardneri ATCC 19865]
Length = 823
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 338/778 (43%), Positives = 482/778 (61%), Gaps = 65/778 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A+ L L ++ P G T V++EGL R +V ++ +L+ IE
Sbjct: 69 YTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVELD-------GALQGQGIE 116
Query: 106 MEQVE-QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIF 159
+E + ++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 117 VEASDAREP------RELEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTI 170
Query: 160 VASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFL 219
A + ++ +L+ ++ RL LVD + ++ ++I +V+ Q+ KSQ+E+
Sbjct: 171 AAHIGVRLADKQRLLEITEIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYY 230
Query: 220 LRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYT 279
L +QM+AI++ELGD DD +L + RK+ AGMP + + EL +LK+M P
Sbjct: 231 LNEQMKAIQKELGDLDDAPGELEEIARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAA 290
Query: 280 SSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDAR 339
R YL+ + +PW+K S+ + DLKAA++ LD+DHYGL +VK+RI+EYLAV+ +
Sbjct: 291 VVRNYLDWLLGVPWKKRSK-VRKDLKAAQDTLDADHYGLDKVKERILEYLAVQSRVKQMK 349
Query: 340 GPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLID 399
GP+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL+
Sbjct: 350 GPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQ 409
Query: 400 GLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIF 459
L +VG NP+ LLDEIDK D RGDP++ALLEVLDPEQN +FNDHYL V DLS+V+F
Sbjct: 410 NLNKVGSKNPLFLLDEIDKMSMDFRGDPSAALLEVLDPEQNNSFNDHYLEVDLDLSEVMF 469
Query: 460 VATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAM 519
VAT+N IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ + +GL E ++I
Sbjct: 470 VATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIAMRYLVPKQIKANGLKPEEIEIGSDA 528
Query: 520 VKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLA 579
++ +++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 529 IQDIVRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LA 563
Query: 580 DGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGIS 639
P V+ + + +VV+ L+K LG RFD A E G+
Sbjct: 564 G---------PQPVVKKAVAKKGKPKALVVVNSKNLDKYLGVRRFDFGRAEEENEI-GLV 613
Query: 640 VGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAED 699
GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 614 TGLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI---- 669
Query: 700 GMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVL 759
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ +RAD AMTGE+TLRG V
Sbjct: 670 DVDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSVLTKVPIRADVAMTGEITLRGRVS 729
Query: 760 PVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI+ V++P+ N KDL ++PA V L+I+ K +++VL+ A E
Sbjct: 730 AIGGLKEKLLAALRGGIRTVLIPDENRKDLADIPANVTRDLKIVPVKWIDEVLDLALE 787
>gi|295695316|ref|YP_003588554.1| ATP-dependent protease La [Kyrpidia tusciae DSM 2912]
gi|295410918|gb|ADG05410.1| ATP-dependent protease La [Kyrpidia tusciae DSM 2912]
Length = 781
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 322/753 (42%), Positives = 460/753 (61%), Gaps = 65/753 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R + T + S+E ++ + E P+ A R
Sbjct: 80 PNG--TIRVLVEGLSRARILRY-----LETEEVFSVEAETVDEDSGEPTPEIEARMRSVL 132
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ +S+ K+ T +L+ +LAD+ + + +++ +L++ D++ RL
Sbjct: 133 HQFEQYVSL--SKKITHETYLAVLDIEEPGRLADVIASHLPLKIKDKQTILEAFDVEERL 190
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
+ L+ + + + KI Q+V Q+ K+QKE+ LR+QM+AI++ELG+ + ++
Sbjct: 191 EQLLRLLSDEREVLELERKINQRVRRQMEKTQKEYFLREQMKAIQKELGEKEGRLAEVEQ 250
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L ++ + MP I + ++KE+ RL+K+ + R Y++ + LPW K E ++D
Sbjct: 251 LREQLAALEMPGEIRERIEKEIDRLEKIPQASAEGSVVRTYIDWLMSLPW-KEPEPREID 309
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
+ A + LD DHYGL +VK+RI+EYLAV+KL +GP+LCFVGPPGVGKTSLA S+A A
Sbjct: 310 IDRASQVLDEDHYGLEKVKERILEYLAVQKLAHRLKGPILCFVGPPGVGKTSLARSVARA 369
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
LGR+F+R+SLGGV+DEA+IRGHRRTY+G++PGR+I G+K+ G +PV LLDEIDK D
Sbjct: 370 LGRRFVRVSLGGVRDEAEIRGHRRTYVGALPGRIIQGMKQAGEMDPVFLLDEIDKMSHDF 429
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDPASALLEVLDPEQN TF+DHY+ VP+DLS+V+F+ TAN A IP PLLDRMEVI LP
Sbjct: 430 RGDPASALLEVLDPEQNHTFSDHYIEVPYDLSRVLFITTANVAYTIPQPLLDRMEVIHLP 489
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EKLRIA +L+P+ L+ HGL + L I + + +I+ YTREAGVRNLER +AA+
Sbjct: 490 GYTEVEKLRIAKGYLVPKQLEAHGLTRDQLSISDETLLKIIRSYTREAGVRNLEREIAAV 549
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E +++ +L S+
Sbjct: 550 CRKAARMIVEGKKKVSLTKSR--------------------------------------- 570
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
L+ LGP RF AAE G++ GL WT GG+ +E + GKG
Sbjct: 571 -----------LQAFLGPERF-RFGAAEETDQVGVATGLAWTEAGGDTLSIEVAVVPGKG 618
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTGQLGDV+KESAQ A +++R+RA L++ D+HIH P GA+PKDGP
Sbjct: 619 KLTLTGQLGDVMKESAQAAFSYIRSRARQLEIPP----GFPDEYDVHIHVPEGAIPKDGP 674
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TALVS + + V + AMTGE+TLRG VLP+GGVK+K L AHR G+++V+LP+
Sbjct: 675 SAGITMATALVSALTGRPVAREVAMTGEITLRGRVLPIGGVKEKCLGAHRAGVQKVLLPK 734
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N KD+ +VP V L + M+DVL +A
Sbjct: 735 DNEKDVRDVPEVVRRQLSFVYVSHMDDVLAEAL 767
>gi|384426845|ref|YP_005636202.1| ATP-dependent protease La [Xanthomonas campestris pv. raphani 756C]
gi|341935945|gb|AEL06084.1| ATP-dependent protease La [Xanthomonas campestris pv. raphani 756C]
Length = 823
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 337/777 (43%), Positives = 479/777 (61%), Gaps = 63/777 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A+ L L ++ P G T V++EGL R +V +++ + R + +E +
Sbjct: 69 YTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVAEQDGALQGRGTEVESSD-- 121
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 122 ----AREP------RELEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+ ++ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLEITEIGDRLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRTK-VRKDLKVAQDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGRL+
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRLVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN TFNDHYL V DLS+V+FV
Sbjct: 411 LNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNHTFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ + +GL E ++I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIAMRYLVPKQIKANGLKPEEIEIGSDAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ V++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 530 QDVVRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
P + V+ + + + V L+K LG RFD A E G+
Sbjct: 565 ---------PQPAAKKAVAKKAKPKALVTVTSRNLDKYLGVRRFDFGRAEEENEI-GLVT 614
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +E+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 615 GLAWTEVGGELLQIESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----D 670
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ +RAD AMTGE+TLRG V
Sbjct: 671 VDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSILTKVPIRADVAMTGEITLRGRVSA 730
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI+ V++P+ N KDL ++PA V L+I+ K +++VL+ A E
Sbjct: 731 IGGLKEKLLAALRGGIRTVLIPDENRKDLADIPANVTRDLKIVPVKWIDEVLDLALE 787
>gi|410463167|ref|ZP_11316700.1| ATP-dependent protease La, partial [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409983695|gb|EKO40051.1| ATP-dependent protease La, partial [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 745
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/703 (44%), Positives = 442/703 (62%), Gaps = 63/703 (8%)
Query: 57 LSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFI 116
+ R ++ P GR+ V+++GL R V + ++ Y A++ L + +EQ+
Sbjct: 106 IMRMLKMPDGRLK--VLVQGLTRARVTDFASTDPYLAAKVEVLTERDPKEATLEQE---- 159
Query: 117 ALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
A+ R + + +++S+ + + VL +LAD+ ++ + EE +L+
Sbjct: 160 AMMRAAREQSEKILSL--RGMASADIMAVLNSVNEPGRLADLVASNLRMRVEEAQRLLEC 217
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
D RL + + + + + KI + + K+QK+F LR+Q++AI+ ELG+ +
Sbjct: 218 EDPVERLRLVNDQLVKEAEVAAMQAKIQNMAKEGMDKAQKDFFLREQLKAIRRELGEGGE 277
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+ DDL L+ + GMP ++ K K+L+RL M P + R YL+ + +LPW+K
Sbjct: 278 ESDDLDELKEALDKVGMPKDVKKEADKQLKRLVSMHPDSSEASVIRTYLDWMVELPWKKL 337
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
S++ LD+K AK LD DH+ L +VK+RI+EYL+VRKL P +GP+LCFVGPPGVGKTSL
Sbjct: 338 SKD-RLDIKEAKRILDEDHFDLEKVKERILEYLSVRKLNPGMKGPILCFVGPPGVGKTSL 396
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
SIA ALGRKF+R+SLGG++DEA+IRGHRRTYIGSMPGR+I +K+ G NPV++LDEI
Sbjct: 397 GRSIARALGRKFVRMSLGGMRDEAEIRGHRRTYIGSMPGRVIQSIKQAGTRNPVIMLDEI 456
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK GSD RGDP+SALLEVLDPEQN TF+DHYLNVPFDLSKV+F+ TAN IPPPLLDR
Sbjct: 457 DKVGSDFRGDPSSALLEVLDPEQNNTFSDHYLNVPFDLSKVMFICTANILDTIPPPLLDR 516
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
ME+I LPGYT +EK++IA R+++PR ++++GL +E + + + +V +I+ YTREAG+RNL
Sbjct: 517 MELIRLPGYTEQEKVKIARRYILPRQIEENGLAAEDVSLSDQVVAKIIRDYTREAGLRNL 576
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER + ++ R A + AE E+
Sbjct: 577 EREVGSVCRKLARRKAEGEEP--------------------------------------- 597
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
FR+T+ + LEK+LGP RF D E E PG++VGL WT GG + +EA
Sbjct: 598 ----PFRVTA------SSLEKLLGPARFMDDE-REPDLPPGVAVGLAWTPVGGAILHIEA 646
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ GKG L LTG+LG+V+KESAQ ALT+ ++RA +L + E + + DIHIH PAG
Sbjct: 647 ATLPGKGGLQLTGKLGEVMKESAQAALTYAKSRAKELGIAPE----MFEKNDIHIHVPAG 702
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVL 759
A PKDGPSAGVTLVTAL+SL + V D AMTGE+TLRG VL
Sbjct: 703 ATPKDGPSAGVTLVTALISLLTNTPVHNDLAMTGEITLRGRVL 745
>gi|390955339|ref|YP_006419097.1| ATP-dependent protease La [Aequorivita sublithincola DSM 14238]
gi|390421325|gb|AFL82082.1| ATP-dependent protease La [Aequorivita sublithincola DSM 14238]
Length = 816
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 321/771 (41%), Positives = 470/771 (60%), Gaps = 73/771 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L R ++ P G T V+++G RF V E+ T Y TA I + + E E
Sbjct: 105 GTVAKIL---RVLKMPDGNTT--VIIQGKKRFEVAEVLTTNPYMTATIREVAEARPEKES 159
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FEISF 167
E F A+ K A+++I +Q ++ + FV+S I
Sbjct: 160 DE----FKAIIDSIKEMALQII---KQSPNIPSEAAFAIKNIESPSFLINFVSSNLNIEV 212
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
E++ V+L+ +LK R + + ++ +Q + + I KV+ +++ Q+E+ L+QQM+ I
Sbjct: 213 EQKQVLLEINNLKDRALETLKYMNMEIQKLSLRNDIQSKVQSDINQQQREYFLQQQMKTI 272
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
+EELG + +E+ ER + + KH QKEL ++K+M PQ ++ R YLEL
Sbjct: 273 QEELGGSSMEEEIEEMHERS-KKKKWSKEVDKHFQKELSKMKRMNPQVAEFSIQRNYLEL 331
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
I DLPW+K S++ DLK A++ LD DHYGL VK+RIIEYLAV KL+ D + P+LC G
Sbjct: 332 ILDLPWDKYSKD-KFDLKRARKVLDRDHYGLDDVKKRIIEYLAVLKLRNDMKSPILCLYG 390
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL S+A ALGRK++R+SLGG++DEA+IRGHR+TYIG+MPGR++ +K+ G
Sbjct: 391 PPGVGKTSLGKSVAEALGRKYVRMSLGGLRDEAEIRGHRKTYIGAMPGRIVQSIKKAGTS 450
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDEIDK + +GDP+SA+LEVLDPEQN +F D++L + +DLSKV+F+AT+N
Sbjct: 451 NPVFVLDEIDKISASNQGDPSSAMLEVLDPEQNNSFYDNFLELGYDLSKVMFIATSNSLS 510
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
I P L DRME+I + GYT EEK+ IA RHL+P+ L +HG+ + L+I + ++ +++ Y
Sbjct: 511 TIQPALRDRMEIIHVTGYTIEEKVEIAKRHLLPKQLKEHGMDKDALKIAKPQLEKIVEGY 570
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TRE+GVR LE+ +A + R AA+K+A +E E E++
Sbjct: 571 TRESGVRGLEKQIAKMVRYAAMKIAMEE---------------------------EYEIK 603
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
VI +E ++E VLG P+ +R+ E G+ GL WT
Sbjct: 604 VI---------------------NEIVVE-VLGAPKM-ERDKYENNDVAGVVTGLAWTRV 640
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQ 705
GG++ F+E+T +GKG L++TG LG V+KESA IAL ++++ A L G+N + +
Sbjct: 641 GGDILFIESTLSKGKGTLNMTGNLGKVMKESATIALEYIKSNADKL------GINPDIFE 694
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
++HIH P GA PKDGPSAG+T++T+LVSLF++++V+ AMTGE+TLRG VLPVGG+K
Sbjct: 695 NYNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQRKVKKSIAMTGEITLRGKVLPVGGIK 754
Query: 766 DKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+KILAA R IK ++L E N D+ E+ L L K M DVL+ A
Sbjct: 755 EKILAAKRARIKEILLCEDNRSDIQEIKPEYLKGLTFHYVKDMSDVLDLAL 805
>gi|256421079|ref|YP_003121732.1| ATP-dependent protease La [Chitinophaga pinensis DSM 2588]
gi|256035987|gb|ACU59531.1| ATP-dependent protease La [Chitinophaga pinensis DSM 2588]
Length = 800
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 318/776 (40%), Positives = 475/776 (61%), Gaps = 70/776 (9%)
Query: 42 VIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEM 101
++ N G AR + L ++ P G T ++++G RF + E+ + Y+ ARI L+
Sbjct: 91 LVDLSNVGTVARIVKL---IKMPDGGTT--IIIQGRKRFKISEVVSEDPYFKARIELLQD 145
Query: 102 TKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVA 161
E V DP+F A K A ++I + ++L+ + FV+
Sbjct: 146 -----EIVTDDPEFDAYISSIKDLAGQIIQL---SPNLPSEASIILKNIENESFLVHFVS 197
Query: 162 S-FEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
S +++ +L+ +L+ R +L+ LQ + KIT K + L K Q+E+ L
Sbjct: 198 SNLNCDLKDKQQLLEINNLRTRAELLLKLLQVELQLAELKNKITNKTKADLDKQQREYFL 257
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QQ+++IKEELG + +D + + L+RK ++ + +K + +L++M P P Y+
Sbjct: 258 QQQLKSIKEELGGDSNDRE-VKELQRKAETKQWTEAAAELFRKGIEKLERMHPSTPDYSV 316
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
+L+L+ DLPW+ +E+ DLK AK+ LD+DHYG+ ++K+RI+EYLAV KLK D +
Sbjct: 317 VYNHLDLMLDLPWKHYTED-SYDLKKAKKILDNDHYGMDKIKERILEYLAVLKLKGDMKS 375
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LCFVGPPG+GKTSL SIASA+GRK++R+SLGG+ DE++IRGHR+TYIG+MPGRL+
Sbjct: 376 PILCFVGPPGIGKTSLGRSIASAIGRKYVRLSLGGLHDESEIRGHRKTYIGAMPGRLLQS 435
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+++V NPVM+LDEIDK G+D RGDP+SA+LEVLDPEQN TF D+YL + +DLSKV+F+
Sbjct: 436 IRKVKTSNPVMILDEIDKIGNDHRGDPSSAMLEVLDPEQNGTFYDNYLELEYDLSKVLFI 495
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
ATAN I P L DR+E+I+L GY+ EEK+ IA RHL+P+ + HGL S ++I ++
Sbjct: 496 ATANNINAISPALRDRLEIIDLSGYSIEEKVEIAKRHLVPKQKEAHGLKSLKMRISNGIL 555
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ ++Q YTRE+GVR L+R LA++ RA A VA +E+ +P S
Sbjct: 556 ERIVQDYTRESGVRELDRQLASIMRAIAKDVALEEE---IPDS----------------- 595
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ E +E++LG R+ + E + PG++V
Sbjct: 596 -----------------------------LTEEHVERILGKGRYSN-EIYKVGNPPGVAV 625
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ F+E + GKGEL LTG LG+V+KES AL++++A A + ++ +
Sbjct: 626 GLAWTYVGGDILFIETSLSEGKGELKLTGNLGNVMKESVSTALSYLQAHAAEFKIDPK-- 683
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
L R IH+H P GAVPKDGPSAG+T++TAL S F+ ++V++ AMTGE+TLRG VLP
Sbjct: 684 --LFGQRTIHVHVPEGAVPKDGPSAGITMLTALTSAFTGRKVKSYLAMTGEITLRGQVLP 741
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
VGG+K+KILAA R GIK +IL +N KD+ E+ + L+ K M V++ A
Sbjct: 742 VGGIKEKILAAKRAGIKEIILCWQNEKDIKEINPDYIKGLKFHFVKEMNQVVDIAL 797
>gi|206577719|ref|YP_002240081.1| DNA-binding ATP-dependent protease La [Klebsiella pneumoniae 342]
gi|206566777|gb|ACI08553.1| ATP-dependent protease La [Klebsiella pneumoniae 342]
Length = 784
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 330/765 (43%), Positives = 465/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVHVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VR+RA L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRSRADKLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|225175197|ref|ZP_03729193.1| ATP-dependent protease La [Dethiobacter alkaliphilus AHT 1]
gi|225169373|gb|EEG78171.1| ATP-dependent protease La [Dethiobacter alkaliphilus AHT 1]
Length = 775
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 320/761 (42%), Positives = 459/761 (60%), Gaps = 81/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVE--------QDPDF 115
P G T V++EGL R V+E ++ L+ + +VE Q +
Sbjct: 81 PGG--TIRVLVEGLSRAYVREFVESDPFFKVEAEELDDDNGKSVEVEALMRSVLYQFEQY 138
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I LS++ + +S +++ GR LADI + + +++ +L+
Sbjct: 139 IKLSKKIPPETLVTVSSIDEP----GR------------LADIIASHLTLKIQQKQDILE 182
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+ + RL K + ++ ++ + + KI +V Q+ ++QKE+ LR+QM+AI++ELG+ D
Sbjct: 183 ATSPRDRLDKLSAILSHEMEVLEIERKINLRVRKQMERTQKEYYLREQMKAIQKELGEKD 242
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
+ + K+ A +P + + KE+ RL+KM P R YL+ I +PW
Sbjct: 243 ERMAEADEYREKISEAELPEEVEEKALKEVERLEKMPPAAAEAVVIRNYLDWILAIPWVY 302
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+++ LDL A+E LD DHYGL +VK+RIIEYLAVR+L +GP+LC VGPPGVGKTS
Sbjct: 303 QTDD-RLDLNRAEEILDEDHYGLEKVKERIIEYLAVRQLAKKLKGPILCLVGPPGVGKTS 361
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
LA SIA AL R F+R+SLGGV+DEA+IRGHRRTY+G+MPGR+I +++ NPV LLDE
Sbjct: 362 LARSIARALERNFVRMSLGGVRDEAEIRGHRRTYVGAMPGRIIQAMRQAKSQNPVFLLDE 421
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK +D RGDP++ALLEVLDPEQN +F DHYL +PFDLS V+F+ TAN IP PLLD
Sbjct: 422 IDKMSTDFRGDPSAALLEVLDPEQNNSFADHYLEIPFDLSNVMFLTTANTLYNIPQPLLD 481
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME I +PGYT EEK++IA R+L+P+ + +HGL + L + E ++ +I++YTREAGVRN
Sbjct: 482 RMETIYIPGYTEEEKVKIAERYLLPKQIKEHGLTKKNLTVSEKTLRKIIRQYTREAGVRN 541
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER LA++ R A +V E+++A + +++
Sbjct: 542 LERQLASICRKTAKEVVRDEKKRAAITVQNL----------------------------- 572
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
+K LG PR+ AE+ GI+ GL WT GG+ +E
Sbjct: 573 --------------------DKYLGIPRY-RFGMAEKEDEVGIATGLAWTEVGGDTLVIE 611
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
T M+GKG+L LTG+LGDV++ESAQ L+++R RA +L + ED + DIH+H P
Sbjct: 612 VTLMKGKGKLMLTGKLGDVMRESAQAGLSYIRTRANELG-IEED---FHEKYDIHVHIPE 667
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA+PKDGPSAG+T+ TAL+S +++ AMTGE+TLRG VLP+GGVK+K+LAAHR G
Sbjct: 668 GAIPKDGPSAGITMATALISALTQRPSCRTVAMTGEITLRGRVLPIGGVKEKVLAAHRAG 727
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
IK ++LP N KD+ E+P V LE +L + M+ VLE A
Sbjct: 728 IKTILLPAENKKDISEIPDNVRRKLEFVLVEHMDQVLEHAL 768
>gi|15965010|ref|NP_385363.1| ATP-dependent protease LA protein [Sinorhizobium meliloti 1021]
gi|334315800|ref|YP_004548419.1| anti-sigma H sporulation factor LonB [Sinorhizobium meliloti AK83]
gi|384528969|ref|YP_005713057.1| anti-sigma H sporulation factor LonB [Sinorhizobium meliloti
BL225C]
gi|384536770|ref|YP_005720855.1| ATP-dependent protease LA protein [Sinorhizobium meliloti SM11]
gi|418402636|ref|ZP_12976144.1| ATP-dependent protease La [Sinorhizobium meliloti CCNWSX0020]
gi|7387835|sp|O69177.2|LON_RHIME RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|15074189|emb|CAC45836.1| Probable ATP-dependent protease LA protein [Sinorhizobium meliloti
1021]
gi|333811145|gb|AEG03814.1| anti-sigma H sporulation factor, LonB [Sinorhizobium meliloti
BL225C]
gi|334094794|gb|AEG52805.1| anti-sigma H sporulation factor, LonB [Sinorhizobium meliloti AK83]
gi|336033662|gb|AEH79594.1| ATP-dependent protease LA protein [Sinorhizobium meliloti SM11]
gi|359503377|gb|EHK75931.1| ATP-dependent protease La [Sinorhizobium meliloti CCNWSX0020]
Length = 806
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 324/789 (41%), Positives = 457/789 (57%), Gaps = 73/789 (9%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ A+D + I+ G A L L ++ P G V V++EG R ++ + R
Sbjct: 57 TQINATDDDPEPSAIY--KVGTIANVLQL---LKLPDGTVK--VLVEGRSRAEIERYTPR 109
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT-KVLL 147
+Y A +L E D D + + ++ E S ++ +K V
Sbjct: 110 DDFYEAMAHALP---------EPDEDPVEIEALSRSVVSEFESYVKLNKKISPEVVGVAS 160
Query: 148 ETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKV 207
+ KLAD + I E+ ML++ +K+RL KA ++ + ++V ++I +V
Sbjct: 161 QIEDYSKLADTVASHLSIKIVEKQEMLETTSVKMRLEKALGFMEGEISVLQVEKRIRSRV 220
Query: 208 EGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
+ Q+ K+Q+E+ L +QM+AI++ELGD++D D++ LE ++ + + EL++
Sbjct: 221 KRQMEKTQREYYLNEQMKAIQKELGDSEDGRDEMAELEERISKTKLSKEAREKADAELKK 280
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
L++M P T R YL+ + LPW K S+ I DL A++ LD+DH+GL +VK+RI+E
Sbjct: 281 LRQMSPMSAEATVVRNYLDWLLGLPWGKKSK-IKTDLNHAEKVLDTDHFGLDKVKERIVE 339
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAV+ +GP+LC VGPPGVGKTSLA SIA A GR++IR++LGGV+DEA+IRGHRR
Sbjct: 340 YLAVQARSSKIKGPILCLVGPPGVGKTSLAKSIAKATGREYIRMALGGVRDEAEIRGHRR 399
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN TF DHY
Sbjct: 400 TYIGSMPGKVVQSMKKAKKSNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNSTFMDHY 459
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
L V +DLS V+F+ TAN IPPPL+DRMEVI + GYT +EK IA RHL+P+ + H
Sbjct: 460 LEVEYDLSNVMFITTANTLN-IPPPLMDRMEVIRIAGYTEDEKREIAKRHLLPKAIRDHA 518
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + + + VIQ YTREAGVRN ER L LAR A ++ + + ++ +++++H
Sbjct: 519 LQPNEFSVTDGALMAVIQNYTREAGVRNFERELMKLARKAVTEILKGKTKKVEVTAENIH 578
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDR 627
LG PRF
Sbjct: 579 -------------------------------------------------DYLGVPRFRHG 589
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E AER G+ GL WT GGE+ +E M GKG + +TG L DV+KES A ++VR
Sbjct: 590 E-AERDDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYVR 648
Query: 688 ARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTA 747
+RA D + L RDIH+H P GA PKDGPSAGV + TA+VS+ + + D A
Sbjct: 649 SRAIDFGIEPP----LFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVMTGIPISKDVA 704
Query: 748 MTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKR 807
MTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL ++P V SLEII R
Sbjct: 705 MTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPDNVKNSLEIIPVSR 764
Query: 808 MEDVLEQAF 816
M +V+ A
Sbjct: 765 MGEVIAHAL 773
>gi|145298873|ref|YP_001141714.1| ATP-dependent protease La [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418361025|ref|ZP_12961684.1| ATP-dependent protease La [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142851645|gb|ABO89966.1| ATP-dependent protease La [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356687747|gb|EHI52325.1| ATP-dependent protease La [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 784
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 309/664 (46%), Positives = 428/664 (64%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + E++ +L+ + R+ +++ + ++V ++I +V+ Q+ K
Sbjct: 164 RLADTMAAHMPLKLEDKQKVLEIASVSERIEFLMAMMESEIDLLQVEKRIRTRVKKQMEK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELG+ +D D+ AL RK++ AGMP + + EL +LK M P
Sbjct: 224 SQREYYLNEQMKAIQKELGELEDSPDEFEALNRKIEEAGMPEDAREKAHAELAKLKMMSP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + +PW KA ++ DL A+E LDSDH+GL +VK+RI+EYLAV+
Sbjct: 284 MSAEATVVRSYVDWMVQVPW-KARSKVKKDLGKAQEVLDSDHFGLEKVKERILEYLAVQA 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 343 RVNKLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSM 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG+LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN +FNDHYL V +D
Sbjct: 403 PGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNNSFNDHYLEVDYD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + + ++GL +
Sbjct: 463 LSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLVSKQIQRNGLKESEI 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
I ++ + VI+ YTREAGVRNLER ++ + R A ++ L
Sbjct: 522 TIEDSALVGVIRYYTREAGVRNLEREISKICRKAVKRI---------------------L 560
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LD + + V++A L++ LG RFD +A ++
Sbjct: 561 LDKSIKH---------------------------VQVNQANLKEFLGVQRFDYGKATDQN 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG++ +E T M GKG+L TG LGDV++ES Q A+T VRARA L
Sbjct: 594 QV-GQVCGLAWTEVGGDLLTIETTNMPGKGKLTYTGSLGDVMQESIQAAMTVVRARADKL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
++ A + + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+T
Sbjct: 653 RINA----DFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVRADVAMTGEIT 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAAHR GIKRV++P+ N +DL E+P V LEI + +++VLE
Sbjct: 709 LRGEVLPIGGLKEKLLAAHRGGIKRVLIPKENERDLEEIPDNVKQDLEIYPVRWIDEVLE 768
Query: 814 QAFE 817
A +
Sbjct: 769 LALQ 772
>gi|291085755|ref|ZP_06353983.2| ATP-dependent protease La [Citrobacter youngae ATCC 29220]
gi|291069761|gb|EFE07870.1| ATP-dependent protease La [Citrobacter youngae ATCC 29220]
Length = 808
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 332/765 (43%), Positives = 464/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 108 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 165
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 166 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 209
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 210 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 269
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 270 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 328
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 329 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 388
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 389 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 448
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 449 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 507
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 508 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIVGIIRYYTREAGVRS 567
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLDN L ++ GE+
Sbjct: 568 LEREISKLCRKAVKQL---------------------LLDNSLK-------HIVINGENL 599
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 600 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 636
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + + + + RDIH+H
Sbjct: 637 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINS----DFYEKRDIHVHV 692
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 693 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 752
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 753 GGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLSLALQN 797
>gi|291287741|ref|YP_003504557.1| ATP-dependent protease La [Denitrovibrio acetiphilus DSM 12809]
gi|290884901|gb|ADD68601.1| ATP-dependent protease La [Denitrovibrio acetiphilus DSM 12809]
Length = 790
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 304/689 (44%), Positives = 436/689 (63%), Gaps = 67/689 (9%)
Query: 128 ELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKAT 187
+L++V+E ++ G KLADI V++ + +E +L+ D RL K
Sbjct: 165 DLVAVIESIEEAG-------------KLADIIVSNLGLKVDEAQEVLELEDPSDRLKKVG 211
Query: 188 ELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERK 247
E + R + + V +KI G++ KSQKE+ LR+Q++AI++ELG+ DD ++ +K
Sbjct: 212 EFLTREISILEVQQKIMNDARGEIDKSQKEYFLREQLKAIRKELGEEDDFMAEMEEYRKK 271
Query: 248 MQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAA 307
++ MP ++ K+L RL KM T +R YL+ + D+PW KA+++ LD+K A
Sbjct: 272 IKKCKMPKDVNAEAMKQLDRLSKMHGDSAEATVARTYLDWMIDVPWSKATKD-KLDIKEA 330
Query: 308 KERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRK 367
K+ LD DH+GL VK RI+++LA+RKLK D + P+LC GPPGVGKTSL S+A A+GRK
Sbjct: 331 KQILDEDHFGLDEVKDRILDFLALRKLKKDIKSPILCLSGPPGVGKTSLGMSVARAMGRK 390
Query: 368 FIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDP 427
++R+SLGGV+DEA+IRGHRRTYIG++PG++I G+K G NPV +LDEIDK GSD RGDP
Sbjct: 391 YVRMSLGGVRDEAEIRGHRRTYIGALPGKIIQGMKTAGTNNPVFMLDEIDKLGSDFRGDP 450
Query: 428 ASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTP 487
+SALLEVLDP QN +F DHYL VP DLSKV+F+ TAN PIPP L DRME+I++PGYT
Sbjct: 451 SSALLEVLDPVQNVSFVDHYLGVPLDLSKVMFITTANYLDPIPPALRDRMEIIQIPGYTE 510
Query: 488 EEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAA 547
EEK+ IA ++L+PR + ++GL ++ + + +I YTRE+G+RNLER + + R
Sbjct: 511 EEKINIAEKYLVPRQIKENGLEDFKVKFSKKALADLIAGYTRESGLRNLERTIGTVCRKL 570
Query: 548 AVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSP 607
+AE ++ ++
Sbjct: 571 GRMIAEGDKRKS------------------------------------------------ 582
Query: 608 LVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHL 667
+V E LEK LGP +F D E + G GL WT GG+V F+E T +GKG L++
Sbjct: 583 FMVTEKALEKHLGPEKFSDDEELKDNEV-GTVTGLAWTPVGGDVLFIECTKFKGKGVLNV 641
Query: 668 TGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGV 727
TGQLGDV+KES++ ALT+VR A + + ED + D+HIH PAGA+PKDGPSAG+
Sbjct: 642 TGQLGDVMKESSRAALTYVRTIAEKVGIDPED----FEKFDLHIHVPAGAIPKDGPSAGI 697
Query: 728 TLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLK 787
T+ TALVS F+ ++V AMTGE+T+ G VLP+GG+K+K+LAA R+GI++V++P +N K
Sbjct: 698 TMGTALVSCFTGRKVNKKVAMTGEITITGKVLPIGGLKEKLLAAKRHGIEKVLVPAKNEK 757
Query: 788 DLVEVPAAVLASLEIILAKRMEDVLEQAF 816
DL +P +V ++EI+ + E+V+E A
Sbjct: 758 DLRTMPKSVKNTMEIVYVSQFEEVIEHAL 786
>gi|389795692|ref|ZP_10198806.1| ATP-dependent serine proteinase La [Rhodanobacter fulvus Jip2]
gi|388430344|gb|EIL87518.1| ATP-dependent serine proteinase La [Rhodanobacter fulvus Jip2]
Length = 827
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 340/784 (43%), Positives = 475/784 (60%), Gaps = 64/784 (8%)
Query: 41 EVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE 100
E H G A L L ++ P G V V++EG R ++++ AR ++E
Sbjct: 67 EAADLHTVGTLAGVLQL---LKLPDGTVK--VLVEGQSRVTIEDCREADGMLVARSRTIE 121
Query: 101 MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQ--KQKTGGRTKVLLETVPIH---KL 155
P + A R+ + LIS+ EQ KQ +VL I ++
Sbjct: 122 ------------PVYNAKERELDVVSRTLISLFEQLVKQSRKLPPEVLASLSGIEEPSRV 169
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
AD A + ++ +L++ D+ RL LVD + +V ++I +V+ Q+ KSQ
Sbjct: 170 ADSIAAHLSVRMADKQKVLETADVAQRLELLIGLVDSEMDLQQVEKRIRGRVKTQMEKSQ 229
Query: 216 KEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQ 275
+E+ L +QM+AI++ELGDN++ +++ L++K+++AGMP + ++E +LK+M P
Sbjct: 230 REYYLNEQMKAIQKELGDNEEGTNEIEELQKKIENAGMPKAVLTKARQEFGKLKQMSPMS 289
Query: 276 PGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK 335
T R YL+ + +PW+K S+ + DL+ A+E LD+DH+GL +VK RI+EYLAV++
Sbjct: 290 AEATVVRNYLDWLVGVPWKKRSK-VHKDLRMAQEVLDADHFGLEKVKDRILEYLAVQQRV 348
Query: 336 PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPG 395
+GP+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTYIGSMPG
Sbjct: 349 ATMKGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYIGSMPG 408
Query: 396 RLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 455
R++ L +VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V FDLS
Sbjct: 409 RIVQNLTKVGTRNPLFMLDEIDKMSMDFRGDPSSALLEVLDPEQNHAFNDHYLEVDFDLS 468
Query: 456 KVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI 515
+V+++ATAN IP PLLDRMEVI +PGYT +EKL IA R+L+ + L +GL E L +
Sbjct: 469 EVMWIATANSLN-IPGPLLDRMEVIRIPGYTEDEKLGIAQRYLLAKQLKANGLKPEELHV 527
Query: 516 PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLD 575
E ++ +++ YTRE+GVRNLER ++ + R ++ E +A + + S
Sbjct: 528 DEEALRDIVRYYTRESGVRNLEREISKICRKVVKELTLGEVTRARKA-----KTKSAKPQ 582
Query: 576 NRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERV 633
+ A G EV TS A L+ LG RFD +E +
Sbjct: 583 KKAAAGVEV--------------------TS------ANLDHYLGVRRFDFGRKEIQNEI 616
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL WT GGE+ +EA+ + GKG L TGQLGDV+KES Q AL+ VRAR L
Sbjct: 617 ---GLVTGLAWTQVGGELLSIEASIVPGKGRLVNTGQLGDVMKESIQAALSVVRARVDQL 673
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ E Q D+HIH P GA PKDGPSAGV + TALVS ++ VR++ AMTGE+T
Sbjct: 674 GIDPE----FHQKLDVHIHVPEGATPKDGPSAGVAMCTALVSALTKIPVRSEVAMTGEIT 729
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAA R GI VI+PE N KDLV++PA + SLEI + +++VL+
Sbjct: 730 LRGRVLPIGGLKEKLLAALRGGITTVIIPEDNKKDLVDMPANITTSLEIHPVRWIDEVLD 789
Query: 814 QAFE 817
A E
Sbjct: 790 IALE 793
>gi|365158047|ref|ZP_09354290.1| lon protease 1 [Bacillus smithii 7_3_47FAA]
gi|363622226|gb|EHL73397.1| lon protease 1 [Bacillus smithii 7_3_47FAA]
Length = 774
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 315/766 (41%), Positives = 464/766 (60%), Gaps = 87/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE-----------MEQVEQD 112
P+G T V++EGL R ++E Y+ + + E K++ ++ EQ
Sbjct: 82 PNG--TIRVLVEGLRRGRIKEFYHEEKYFHVVVETFEEEKMKDIETQALMRTLLDTFEQ- 138
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I +S++ A +S +E+ GR LADI + I ++
Sbjct: 139 --YIKMSKKITAETFTTVSDIEEP----GR------------LADIIASHLPIKIHQKQE 180
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L++V +K RL K +++ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELG
Sbjct: 181 ILETVAIKERLQKLIDILHNEKEILNLEKKIGQRVKQSMERTQKEYYLREQMKAIQKELG 240
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D + ++ L ++++ AGMP ++ + KEL R + + R YLE + +P
Sbjct: 241 DKEGKTGEVEELTKRIEDAGMPEHVKETAMKELGRYESIPTSSAESAVIRNYLEWLITIP 300
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W KA+++ DL++K A+ L+ DHYGL +VK+R++EYLAVRKL +GP+LC VGPPGVG
Sbjct: 301 WSKATKD-DLNIKKAERILNRDHYGLEKVKERVLEYLAVRKLTRSVKGPILCLVGPPGVG 359
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSLA SIA +L RKF+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+++ G NPV L
Sbjct: 360 KTSLARSIAESLNRKFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIRGMQKAGTINPVFL 419
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK SD RGDP++A+LEVLDPEQN F+DH++ P+DLS V+F+ATAN IP P
Sbjct: 420 LDEIDKMSSDFRGDPSAAMLEVLDPEQNHAFSDHFIEEPYDLSNVMFIATANDLSTIPGP 479
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DRME+I +PGYT EK+ IA HL+P+ L ++GL LQI ++ +++ YTREAG
Sbjct: 480 LRDRMEIISIPGYTELEKIHIAKDHLLPKQLKENGLKKGQLQIRNDAIQDIVRYYTREAG 539
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VR LER LAA+ R A + E+ +
Sbjct: 540 VRGLERQLAAICRKTAKMIVAGEKRR---------------------------------- 565
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
++V E LE+ LG F +AE+V G++ GL +T GG+
Sbjct: 566 ---------------VIVTENNLEEFLGKKIF-RYGSAEKVDQIGVANGLAYTPVGGDTL 609
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
+E + GKG+L LTG+LGDV+KESAQ A ++VR+ A +L + ED + DIHIH
Sbjct: 610 QIEVSLAPGKGKLVLTGKLGDVMKESAQAAFSYVRSNAKELG-IEED---FHEKYDIHIH 665
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
P GAVPKDGPSAG+T+ TALVS + + V + MTGE+TLRG VLP+GG+K+K L AH
Sbjct: 666 VPEGAVPKDGPSAGITMATALVSALTNRPVHKEVGMTGEITLRGRVLPIGGLKEKSLGAH 725
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
R G+K +I+P+ N KDL ++P ++ L +L +M++VL+ A G
Sbjct: 726 RAGLKTIIVPQENEKDLDDIPTSIRKDLHFVLVSQMDEVLKTALAG 771
>gi|418056142|ref|ZP_12694196.1| anti-sigma H sporulation factor, LonB [Hyphomicrobium denitrificans
1NES1]
gi|353210420|gb|EHB75822.1| anti-sigma H sporulation factor, LonB [Hyphomicrobium denitrificans
1NES1]
Length = 804
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 316/763 (41%), Positives = 464/763 (60%), Gaps = 67/763 (8%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ R + P G T+ V+L+G+ R + + + AR++ + T+ + P+
Sbjct: 97 NIVRYITMPDG--THHVILQGVQRIRILDFIPGTPFPVARVAHIPETET------RSPEI 148
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
A R ++ A+E + +L Q + + + LAD+ +I E++ +L+
Sbjct: 149 EARFRNLQSQALEAMQLLPQAPQE--LIAAIQDATSAGALADLAAGYMDIPAEQKQEILE 206
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+VDL R+ + + L+ ++ +R+ ++I ++ + L + Q+E +LR+QM AI+ +LG+ D
Sbjct: 207 TVDLITRIDRVSRLLGERIEVMRLTQEIGRQTKAALDERQREAVLREQMAAIQRQLGEGD 266
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
+++ L + A MP ++ + +KEL+R ++M R YL+ + +LPW+
Sbjct: 267 GKTEEVRELSESIAKANMPRDVEEQARKELKRYERMPDAAAETGMIRTYLDWLTELPWQ- 325
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
EE +D+ A+ LD DH+GL ++K+R++EYLAVRKL P+ + P+LCFVGPPGVGKTS
Sbjct: 326 LPEEKPIDISGARRILDEDHFGLDKIKRRVLEYLAVRKLAPEGKAPILCFVGPPGVGKTS 385
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A+GR F+R+SLGGV DEA+IRGHRRTYIG++PG +I +++ G N VM+LDE
Sbjct: 386 LGQSIARAMGRPFVRVSLGGVHDEAEIRGHRRTYIGALPGNIIQAIRKAGTRNCVMMLDE 445
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK G ++GDPA+A+LEVLDPEQN TF D+YL PFDLS+V+F+ATAN IP PL D
Sbjct: 446 IDKMGRGIQGDPAAAMLEVLDPEQNNTFRDNYLGAPFDLSRVVFIATANMLDTIPGPLRD 505
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT EKL IA R+L+ R + +GL +E I + ++ +I+ YTREAGVRN
Sbjct: 506 RMEVISLSGYTESEKLEIARRYLVRRQFEANGLTAEQADIDDEALRAIIRGYTREAGVRN 565
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKD-VHRLGSPLLDNRLADGAEVEMEVIPMGES 594
LER + R AAV++A+ E D V LG P +N EV M
Sbjct: 566 LEREIGQALRTAAVRIADHSTEHVHIGVNDLVGALGPPRFEN------EVAM-------- 611
Query: 595 THEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFV 654
R + PG++ GL WT GG++ F+
Sbjct: 612 -------------------------------------RTSVPGVATGLAWTPVGGDILFI 634
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFP 714
EAT GKG LTGQLGDV++ESAQ A+T V++RA+ L + + + + DIH+H P
Sbjct: 635 EATRAPGKGSFILTGQLGDVMRESAQAAMTLVKSRASSLDIDPK----IFETSDIHVHVP 690
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
AGA PKDGPSAGV + TALVSL + + VR+DTAMTGE++LRGLVLPVGG+K+K++AA
Sbjct: 691 AGATPKDGPSAGVAMFTALVSLLTDRTVRSDTAMTGEISLRGLVLPVGGIKEKVVAAAAA 750
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GI RV+LP RN +D ++P LE + A+R++DV+ A E
Sbjct: 751 GITRVVLPARNRRDFEDIPEDARNRLEFLWAERVDDVIAAALE 793
>gi|402699099|ref|ZP_10847078.1| ATP-dependent protease La [Pseudomonas fragi A22]
Length = 798
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 330/759 (43%), Positives = 457/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ Y +A +S ++ + A R+ +
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFGQAEGYLSAEVSLID-------------EVAAPERESE 124
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPI---HKLADIFVASFEISFEEQLVMLDSVD 178
LIS EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 125 VFVRSLISQFEQYVQLGKKVPAEVLSSLNSIDEPSRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L+ R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD DD
Sbjct: 185 LQTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDDGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L+++++SAG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEIEELKKRIESAGLPKDAMAKAQAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDLK A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLKRAEDILDADHYGLDEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ ++ +GL + ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLAPKQIEANGLKKGEIAFDNEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A H +
Sbjct: 543 QIAKICRKAV---------------------------------------------KEHAM 557
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
F +T V +LE LG ++ AE G GL WT GGE+ +EA
Sbjct: 558 EKRFAVT----VTPELLEHFLGVRKY-SYGLAEVQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD+HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDVHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTLIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKT 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|452851008|ref|YP_007492692.1| Lon protease [Desulfovibrio piezophilus]
gi|451894662|emb|CCH47541.1| Lon protease [Desulfovibrio piezophilus]
Length = 821
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 295/666 (44%), Positives = 433/666 (65%), Gaps = 52/666 (7%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD + +I F + +L+ +D RL +A EL+ ++ + + +++ +V+ Q+ K
Sbjct: 179 QLADQVMPHLKIDFARKQDVLEEMDSSKRLERAYELLLGEIEIVSIEKRVKGRVKDQMEK 238
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+Q+E+ L +Q +AI +E+G DD + + LE ++Q+ M + V KEL++L+ MQP
Sbjct: 239 NQREYYLNEQSKAINKEMGREDDPQAEAKELEEQLQAKPMSEENRERVGKELKKLRTMQP 298
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
YT R Y++ + DLPW++ + + D+D+K A+ LD DH+GL + K+RI+EYLAV+
Sbjct: 299 SSAEYTVVRNYIDWVLDLPWDQVTNDSDVDIKEARSILDEDHFGLEKPKERILEYLAVQT 358
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LCFVGPPGVGKTS+A SIA ++GR+F+RISLGGV+DEA+IRGHRRTY+G+M
Sbjct: 359 LVDTMKGPILCFVGPPGVGKTSIAKSIARSMGREFLRISLGGVRDEAEIRGHRRTYVGAM 418
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG++I LKRV NPV+ LDE+DK +D RGDP++ALLEVLDPEQN FNDHYL++ +D
Sbjct: 419 PGKIIQSLKRVENNNPVICLDEVDKMSADFRGDPSAALLEVLDPEQNNAFNDHYLDLDYD 478
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV F+ TAN+ + IP PL DRME+I LPGY EK+ IA +L+P+ ++QHGL +E L
Sbjct: 479 LSKVFFITTANQLEGIPLPLQDRMEIIRLPGYLETEKVEIAKGYLLPKQIEQHGLKAENL 538
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ + + +++ YTREAGVRNLER +A++ R +A+++ E + K +H
Sbjct: 539 KFSDNAMLDIVRYYTREAGVRNLEREIASVCRKSAMRIVEDDDR-----DKVIH------ 587
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
+ + LEK+LG ++ E E+
Sbjct: 588 ------------------------------------ISKQSLEKMLGVTKYSYGE-REKE 610
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
A G+ GL WT GGE+ VE M G+G++ +TG+LGDV++ESA+ A++++RAR+ L
Sbjct: 611 AQVGVCNGLAWTQLGGEMLLVEVALMPGQGKVEITGKLGDVMQESARAAISYIRARSHML 670
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
L + + D+HIH P GA PKDGPSAG+TL TAL+S VR D AMTGE+T
Sbjct: 671 GLKPDFNTKV----DVHIHVPDGATPKDGPSAGITLTTALISALLNIPVRHDLAMTGEIT 726
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+++K+LAAHR IK V++P N KDL EVP +L LEII M++V++
Sbjct: 727 LRGRVLPIGGLREKLLAAHRGLIKTVLIPAENEKDLKEVPKDILKDLEIIPVMTMDEVID 786
Query: 814 QAFEGG 819
+A + G
Sbjct: 787 KALDNG 792
>gi|402297605|ref|ZP_10817367.1| ATP-dependent protease La 1 [Bacillus alcalophilus ATCC 27647]
gi|401727142|gb|EJT00338.1| ATP-dependent protease La 1 [Bacillus alcalophilus ATCC 27647]
Length = 775
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 320/760 (42%), Positives = 459/760 (60%), Gaps = 78/760 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G V V +EGL R + + Y + LE ++DP S + +
Sbjct: 83 PNGTVR--VHVEGLSRAKISQFLDNEDYLEVEMDVLE---------DKDP---YKSPEIQ 128
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHK-------LADIFVASFEISFEEQLVMLDS 176
A ++++ EQ K K+ +ETV K LAD+ A+ + E+ +L+
Sbjct: 129 AIMRNMLTMFEQYTKVS--KKISVETVQTIKEISEPSRLADVVSANLPLKLSEKQQLLEM 186
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+K RL ++++ + + + +KI Q+V+ + K+QKE+ LR+QM+AI++ELGD +
Sbjct: 187 TSVKERLIHLIQILNNEQEVLGLEKKIGQRVKKSMEKTQKEYYLREQMKAIQKELGDKEG 246
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
++ L +++++ MP I KEL R +KM + R YL+ + LPW K
Sbjct: 247 RTGEVATLREQIENSDMPEAILTKALKELDRYEKMPTNAAESSVLRNYLDWLIQLPWTKE 306
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
+ + LD+ A+E LD DHYGL +VK+R++EYLAV++L + +GP+LC GPPGVGKTSL
Sbjct: 307 TTD-QLDVIRAEEILDKDHYGLEKVKERVLEYLAVQQLTRELKGPILCLAGPPGVGKTSL 365
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
A SIA +LGRKF+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K+ NPV LLDEI
Sbjct: 366 ARSIARSLGRKFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKKAETVNPVFLLDEI 425
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK +D RGDP+SALLEVLDPEQN TF+DHY+ P+DLSKV+FV TAN IP PLLDR
Sbjct: 426 DKMANDFRGDPSSALLEVLDPEQNNTFSDHYIEDPYDLSKVMFVTTANNIGTIPGPLLDR 485
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVI + GYT EK++IA +L + HGL L+I + + +I+ YTREAGVR L
Sbjct: 486 MEVITIAGYTELEKMQIAKNYLQKKQRKDHGLTGNMLRINDEALLKIIRHYTREAGVRTL 545
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER LAA++R AA +
Sbjct: 546 ERQLAAISRKAAKMIVS------------------------------------------- 562
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
N R+T V+E M+E++LG PRF AE G + GL +T GG+ +E
Sbjct: 563 --GNKKRVT----VNEKMVEEMLGKPRF-HYGLAEIEDQIGAATGLAYTTAGGDTLSIEV 615
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ GKG+L LTG+LGDV+KESAQ A +++R+R+++L++ N + DIHIH P G
Sbjct: 616 SLAPGKGKLSLTGKLGDVMKESAQAAFSYIRSRSSELEI----NPNFHEENDIHIHVPEG 671
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAG+T+ TAL+S + + V+ + MTGE+TLRG VLP+GG+K+K ++AHR G+
Sbjct: 672 ATPKDGPSAGITMATALISALTDRPVKREVGMTGEITLRGRVLPIGGLKEKSMSAHRAGL 731
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K +I+P+ N KDL +VP +V L+ IL +++VL+ A
Sbjct: 732 KTIIIPKDNEKDLEDVPESVRKDLDFILVSHLDEVLKHAL 771
>gi|392408623|ref|YP_006445230.1| ATP-dependent proteinase [Desulfomonile tiedjei DSM 6799]
gi|390621759|gb|AFM22966.1| ATP-dependent proteinase [Desulfomonile tiedjei DSM 6799]
Length = 802
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 307/665 (46%), Positives = 421/665 (63%), Gaps = 58/665 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD + E++ +L+ L R+ + EL+ ++ + +KI +V+ Q+ K
Sbjct: 170 RLADTIAGQLNLKIEDKQRLLELSSLTARIERVLELMQSEIEIAEIEKKIRDRVKKQMEK 229
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQKE+ L +QMRAI++E+G+ DD ++++ LE ++ +P V+KE+R+LK M P
Sbjct: 230 SQKEYYLSEQMRAIQKEMGEKDDFKNEIADLEEQLAKKNLPPEAETKVRKEIRKLKLMSP 289
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ LPW SE DL++ A++ LD DHYGL VKQRIIEYLAV+K
Sbjct: 290 MSAEATVVRNYIDWFLVLPWTTKSES-DLNIDQAQQILDEDHYGLKEVKQRIIEYLAVQK 348
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +RGP+LC VGPPGVGKTSLA S+A A GR+F+RISLGGV+DEA+IRGHRRTYIG++
Sbjct: 349 LVTRSRGPILCLVGPPGVGKTSLARSVARATGREFVRISLGGVRDEAEIRGHRRTYIGAL 408
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG++I +K+V NPVMLLDE+DK D RGDP++ALLEVLDPEQN TFNDHYL+V +D
Sbjct: 409 PGKIIQSMKKVQTVNPVMLLDEVDKMSMDFRGDPSAALLEVLDPEQNHTFNDHYLDVDYD 468
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS+V+F+ TAN IP PL DRME+I LPGYT EKL+IA R L+P+ ++ +GL +++
Sbjct: 469 LSQVMFITTANTLHGIPAPLQDRMEIIRLPGYTELEKLKIAERFLVPKQMEANGLSDDYI 528
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ VI+RYTREAGVRNLER + + R A KDV +G L
Sbjct: 529 AFSRKAILRVIRRYTREAGVRNLERQFSKICRKVA---------------KDV--VGGTL 571
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAE 631
+E+E +G + LG P R+ RE +E
Sbjct: 572 -------NGRIEIEARQVG------------------------RFLGVPKFRYGKREESE 600
Query: 632 RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
+V GI+ GL WT GGE+ VE M G G+L +TG+LG+V++ESAQ A+++VR+RA
Sbjct: 601 KV---GIATGLAWTEVGGELLIVEVATMPGSGKLTVTGKLGEVMQESAQAAMSYVRSRAW 657
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
L L + DIHIH P GA PKDGPSAG+T+ +A++S ++K D AMTGE
Sbjct: 658 GLGL----KTDFYNKVDIHIHVPEGATPKDGPSAGITMTSAIISALTKKPFPNDLAMTGE 713
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+K+K+LAA R I+RVI+P N KDL EV + L+II M++V
Sbjct: 714 ITLRGQVLPIGGLKEKLLAAKRGLIERVIIPRENEKDLKEVAHGIRKGLKIIPVDHMDEV 773
Query: 812 LEQAF 816
L+ F
Sbjct: 774 LQIVF 778
>gi|390959027|ref|YP_006422784.1| ATP-dependent protease La [Terriglobus roseus DSM 18391]
gi|390413945|gb|AFL89449.1| ATP-dependent protease La [Terriglobus roseus DSM 18391]
Length = 838
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 335/816 (41%), Positives = 473/816 (57%), Gaps = 108/816 (13%)
Query: 37 KNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI 96
++ E H G A + + V+ P+ + V EG R + E + TA
Sbjct: 73 QDSPEATELHQYGTLAT---IHKVVKMPNQ--SLFVFTEGTERIKLGEFEQSTPFLTATY 127
Query: 97 SSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIH--- 153
S+ + DP + + +A ++S +Q L+T+ ++
Sbjct: 128 ESIP---------DADP---GKTPELEALQRNVVSQFQQVVTASPTLSDDLQTIALNIEE 175
Query: 154 --KLADIFVAS--FEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEG 209
+LAD +S F + ++Q +L++ D+ R+ + + + + L+ ++ KI +V+
Sbjct: 176 PGRLADFISSSLPFLTTVDKQ-ELLETTDVNARMERLNKYLVKELEVQQLRSKIQTEVQD 234
Query: 210 QLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLK 269
+ +SQ+E+ LR+QM+AI +ELG+ DD + L K+++AGMP K KEL RL+
Sbjct: 235 AVQQSQREYYLREQMKAISKELGEGDDSNKHITELREKIEAAGMPEETKKEALKELNRLQ 294
Query: 270 KMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYL 329
+M P QP Y +R Y+E +A LPW K+S + ++++K A + LD DHYGL +VK RI++YL
Sbjct: 295 RMNPAQPDYGMARTYIEWLAALPWAKSSGK-EVNIKEASDFLDEDHYGLQKVKDRILDYL 353
Query: 330 AVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTY 389
+VR+LKPD +GP+LCFVGPPGVGKTSL SIA ALGRKF RISLGG+ DEA+IRGHRRTY
Sbjct: 354 SVRRLKPDMKGPILCFVGPPGVGKTSLGKSIARALGRKFARISLGGMHDEAEIRGHRRTY 413
Query: 390 IGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLN 449
IG+MPG++I LKRV +PV +LDEIDK G D RGDPASALLE LDP QN TF D+YL+
Sbjct: 414 IGAMPGQIIQNLKRVETNDPVFMLDEIDKLGRDFRGDPASALLETLDPAQNGTFRDNYLD 473
Query: 450 VPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGL- 508
PFDLSKV+F+ TAN+ PIP PLLDRME+IEL GYT EEK+ IA R+L+PR + ++G+
Sbjct: 474 QPFDLSKVLFICTANQLDPIPAPLLDRMEIIELTGYTEEEKVNIAERYLVPRQIRENGIE 533
Query: 509 --------------------------GSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
G + P+ + ++ + YTREAGVR LE+ +
Sbjct: 534 PVAAPKEETKPEEGGVPESQLPEPVAGEPRIIFPKESLGIIARHYTREAGVRKLEQLIGT 593
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
+ R A ++AE + E + + + +H + G +V +
Sbjct: 594 VCRKQARRIAEGKTETLVVTDEIIH---------QFLGGYKVRV---------------- 628
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
D E AER G++VGL WT GG+V F+EA M+GK
Sbjct: 629 -----------------------DTEIAERTKRSGVAVGLAWTPVGGDVLFIEANKMKGK 665
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
G+L TGQLGDV+KES A TW+R+ A L + + + DIH+H PAGA+PKDG
Sbjct: 666 GKLDRTGQLGDVMKESVHAAYTWIRSNAAMLGI----DEKVFEELDIHVHVPAGAIPKDG 721
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAGVT+ TALVSL + + +R AMTGE+TL G VLPVGG+K+K LAA R G+K VILP
Sbjct: 722 PSAGVTMATALVSLLTDRPIRPLLAMTGEITLSGNVLPVGGIKEKFLAAKRAGVKDVILP 781
Query: 783 ERNLKDLVE--VPAAVLASLEIILAKRMEDVLEQAF 816
++K VE + A + + I A R+EDVL A
Sbjct: 782 -IDVKANVEEDLTADQVEGITIHYASRIEDVLAVAL 816
>gi|117621379|ref|YP_856544.1| ATP-dependent protease La [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117562786|gb|ABK39734.1| ATP-dependent protease La [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 784
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 309/664 (46%), Positives = 428/664 (64%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + E++ +L+ + R+ +++ + ++V ++I +V+ Q+ K
Sbjct: 164 RLADTMAAHMPLKLEDKQKVLEIASVSERIEFLMAMMESEIDLLQVEKRIRSRVKKQMEK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELG+ +D D+ AL RK++ AGMP + + Q EL +LK M P
Sbjct: 224 SQREYYLNEQMKAIQKELGELEDSPDEFEALNRKIEEAGMPEDAREKAQAELAKLKMMSP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + +PW KA ++ DL A+E LD+DHYGL +VK RI+EYLAV+
Sbjct: 284 MSAEATVVRSYVDWMVQVPW-KARSKVKKDLGKAQEVLDADHYGLEKVKDRILEYLAVQA 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 343 RVNKLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSM 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG+LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN +FNDHYL V +D
Sbjct: 403 PGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNNSFNDHYLEVDYD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + + ++GL +
Sbjct: 463 LSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLVSKQIQRNGLKESEI 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
I ++ + VI+ YTREAGVR+LER ++ + R A ++ L
Sbjct: 522 TIEDSALVGVIRYYTREAGVRSLEREISKICRKAVKRI---------------------L 560
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LD + + V++A L++ LG RFD +A ++
Sbjct: 561 LDKSIKH---------------------------VQVNQANLKEFLGVQRFDYGKATDQN 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG++ +E T M GKG+L TG LGDV++ES Q A+T VRARA L
Sbjct: 594 QV-GQVCGLAWTEVGGDLLTIETTNMPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEKL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
++ A + + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+T
Sbjct: 653 RINA----DFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVRADVAMTGEIT 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAAHR GIKRV++P+ N +DL E+P V LEI + +++VLE
Sbjct: 709 LRGEVLPIGGLKEKLLAAHRGGIKRVLIPKENERDLEEIPDNVKQDLEIYPVRWIDEVLE 768
Query: 814 QAFE 817
A +
Sbjct: 769 LALQ 772
>gi|429333161|ref|ZP_19213866.1| ATP-dependent protease La [Pseudomonas putida CSV86]
gi|428762167|gb|EKX84376.1| ATP-dependent protease La [Pseudomonas putida CSV86]
Length = 798
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 331/759 (43%), Positives = 460/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ + A ++ +E T+ A R+ +
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFVEVEGHIRAEVALIEETE-------------AADRESE 124
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 125 VFVRSLLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD D+
Sbjct: 185 LAARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++++AG+P + + Q EL +LK+M P T R YL+ + +PW KA
Sbjct: 245 NEVEELKKRLEAAGLPKDAYAKAQAELNKLKQMSPMSAEATVVRSYLDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIASA RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIASATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L+P+ + +GL L + A ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLLPKQIKANGLKKGELDVEVATIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R + Q+Q Q ++GS
Sbjct: 543 QIAKVCRKVVKEYTGQKQAQV--------KVGSD-------------------------- 568
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
LE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 569 ---------------QLEHFLGVRKF-RYGLAEQQDQVGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES A T VR+RA L + A + + RD HIH P GA
Sbjct: 613 IPGKGQLIKTGSLGDVMVESITAAQTVVRSRAQSLGIPA----DFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKT 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|91977362|ref|YP_570021.1| ATP-dependent protease La [Rhodopseudomonas palustris BisB5]
gi|91683818|gb|ABE40120.1| Lon-A peptidase. Serine peptidase. MEROPS family S16
[Rhodopseudomonas palustris BisB5]
Length = 812
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 322/760 (42%), Positives = 452/760 (59%), Gaps = 81/760 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR---ISSLEMTKIEMEQVEQD--PDFIAL 118
P G V V++EGL R V+ + R YY A+ I+ + T +E E + + DF +
Sbjct: 91 PDGTVK--VLVEGLARAKVENYTDRTEYYEAQAQSIADTDATSVEAEALSRSVVSDFESY 148
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
+ K + E++ V++ KL D + + ++ +L+++
Sbjct: 149 VKLNKKISAEVVGVVQS-------------ITDFAKLGDTVASHLAVKIADRQGILETLS 195
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL K L++ + ++V ++I +V+ Q+ K+Q+E+ L +QM+AI++ELGD D+
Sbjct: 196 VTARLEKVLGLMESEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGD-DEGR 254
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
D+L LE K+ + + Q EL++L++M P T R YL+ + +PW K S+
Sbjct: 255 DELADLEEKIAKTKLSKEAREKAQHELKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSK 314
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ DL+AA+ LDSDHYGL +VK+RI+EYLAV+ GP+LC VGPPGVGKTSL
Sbjct: 315 -VKKDLEAAQATLDSDHYGLEKVKERIVEYLAVQSRANKLSGPILCLVGPPGVGKTSLGK 373
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A GR+F+R+SLGGV+DEA+IRGHRRTYIGSMPG++I +++ NP+ LLDEIDK
Sbjct: 374 SIAKATGREFVRVSLGGVRDEAEIRGHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDK 433
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
G+D RGDP+SALLEVLDPEQN TFNDHYL V +DLS V+F+ TAN IP PL+DRME
Sbjct: 434 MGADFRGDPSSALLEVLDPEQNSTFNDHYLEVDYDLSNVMFITTANTLN-IPGPLMDRME 492
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
+I + GYT EK+ IA +HLIP L +HGL S+ I + + L+I+RYTREAGVRNLER
Sbjct: 493 IIRIAGYTENEKVEIARKHLIPLALTKHGLDSKEWSIDDDALLLMIRRYTREAGVRNLER 552
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
L+ LAR A ++ L K V
Sbjct: 553 ELSTLARKAV-------KDLMLSKKKSVK------------------------------- 574
Query: 599 SNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
V E +E+ LG P RF + E ++V G+ GL WT+ GGE+ +E+
Sbjct: 575 -----------VTEKSIEEYLGVPKFRFGEIELEDQV---GVVTGLAWTDVGGELLTIES 620
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
M GKG + +TG L DV+KES A ++VR+RA + + RDIH+H P G
Sbjct: 621 VMMPGKGRMTVTGNLRDVMKESISAAASYVRSRAITFGIEPP----FFERRDIHVHVPEG 676
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAGV + T +VS+ + +R D AMTGE+TLRG VLP+GG+K+K+LAA R GI
Sbjct: 677 ATPKDGPSAGVAMATTIVSVLTGIPIRRDIAMTGEITLRGRVLPIGGLKEKLLAAARGGI 736
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K V++PE N KDL E+ A+ L II RM++V+ A
Sbjct: 737 KTVLIPEDNAKDLTEISDAIKGGLHIIPVARMDEVIANAL 776
>gi|197284029|ref|YP_002149901.1| DNA-binding ATP-dependent protease La [Proteus mirabilis HI4320]
gi|227358100|ref|ZP_03842442.1| ATP-dependent protease La [Proteus mirabilis ATCC 29906]
gi|425066922|ref|ZP_18470038.1| lon protease [Proteus mirabilis WGLW6]
gi|425073645|ref|ZP_18476751.1| lon protease [Proteus mirabilis WGLW4]
gi|194681516|emb|CAR40399.1| ATP-dependent protease La [Proteus mirabilis HI4320]
gi|227161835|gb|EEI46867.1| ATP-dependent protease La [Proteus mirabilis ATCC 29906]
gi|404594916|gb|EKA95471.1| lon protease [Proteus mirabilis WGLW4]
gi|404601593|gb|EKB01985.1| lon protease [Proteus mirabilis WGLW6]
Length = 784
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 326/766 (42%), Positives = 463/766 (60%), Gaps = 89/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EG+ R + LS G Y+ A+ L+ + E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGIRRAKITTLSDNGEYFQAKAEYLDTPVVDEREQEVLNRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + +E+ K LAD + + +++ +L+
Sbjct: 142 IKLNKKIPPEVLASLHAIEESAK----------------LADTIASHMPLKLKDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVTERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D++ +L+RK+++A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEMESLKRKIEAAKMPKEAREKTEAELQKLKMMSPMSAEATVVRSYIDWMVQVPWNS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQEVLDTDHYGLERVKERILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKENELTIHDSAIMGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A +Q L S H
Sbjct: 544 LEREISKLCRKAV--------KQLLMDSTIKH---------------------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ +DE L+ LG + D A R+ G+ GL WT GG++
Sbjct: 568 ------------IEIDENNLKDYLGVRKVDYGRADTENRI---GMVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E ++ GKG+L TG LG+V++ES Q A+T VRARA L G+N + RDIH+
Sbjct: 613 IETASVPGKGKLTFTGSLGEVMQESIQAAMTVVRARADKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VR+D AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSSLTGNPVRSDVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
HR GIK V++P+ N +DL E+P ++A L+I K +E+VL A E
Sbjct: 727 HRGGIKTVLIPDENKRDLEEIPENIVADLDIHPVKTIEEVLTLALE 772
>gi|302391293|ref|YP_003827113.1| ATP-dependent proteinase [Acetohalobium arabaticum DSM 5501]
gi|302203370|gb|ADL12048.1| ATP-dependent proteinase [Acetohalobium arabaticum DSM 5501]
Length = 778
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 320/772 (41%), Positives = 462/772 (59%), Gaps = 70/772 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A+ L V+ P G T +++EGL R + E Y+ R+ +E + E
Sbjct: 72 YDMGTVAQVKQL---VKLPDG--TIKILVEGLKRAKIDEFLQEDPYFKIRLQEIEPEEKE 126
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI-HKLADIFVASFE 164
+++E AL R E + + QK T + + V +L D+ V+
Sbjct: 127 SKELE------ALMRSLVNRFEEYVKL---NQKLPPETMMTVANVEDPGRLVDVMVSHMS 177
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+ +++ +L +V K RL + +L+D ++ + V +KI +V Q+ K QKE+ L++Q+
Sbjct: 178 LKVDQEQEILQAVSYKERLKQLYKLLDEEIEVLEVKDKINSEVREQVEKRQKEYYLKEQL 237
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+AIK+ELG +++ D++ K++ A +P + + KE+ RL +M P R Y
Sbjct: 238 KAIKKELGQDEEMSDEIEEYRTKIEEADLPEEVEEKALKEVDRLTRMPPMANEGVVVRNY 297
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
L+ I DLPW + S++ L L A+E L+ DHYGL VK RI+EYLAVRKL + + P+LC
Sbjct: 298 LDCILDLPWNEKSQD-RLVLDDAEEILERDHYGLEDVKDRILEYLAVRKLTDEMKSPILC 356
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
VGPPGVGKTSL S+A A+GR+F+R+SLGG+KDEA+IRGHRRTY+GS PGR+I+ ++
Sbjct: 357 LVGPPGVGKTSLGKSLAEAIGREFVRLSLGGLKDEAEIRGHRRTYVGSRPGRIINAIRDA 416
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G NP+ LLDE+DK SD RGDPA+ALLEVLDPEQN TF DHYL +PFDLS VIF+ TAN
Sbjct: 417 GTNNPLFLLDEVDKIQSDFRGDPAAALLEVLDPEQNDTFTDHYLELPFDLSDVIFITTAN 476
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
IP PL DRMEVIE+ GYT E+K++IA HL+P+ ++ HGL + + + E ++ +I
Sbjct: 477 VTHTIPGPLQDRMEVIEIAGYTEEDKVKIAQEHLLPKQIENHGLSEDQINVSENAIRKLI 536
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEV 584
+ YTRE+GVRNLER LA + R A +V K RL + N
Sbjct: 537 RNYTRESGVRNLERKLAGVCRKVAKEVV-----------KGKERLSRVTVQN-------- 577
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
++ LG +F+ E E + G++ GL W
Sbjct: 578 ------------------------------VDSYLGIEKFNYGEVDEE-SQVGVATGLAW 606
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GG++ +E + + GKG+L LTG+LGDV+KES Q AL++ R++ + +L ED
Sbjct: 607 TKSGGDILKIEVSVVPGKGKLLLTGKLGDVMKESGQAALSYARSKIEEFEL-EED---FH 662
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
+ DIHIH P GA+PKDGPSAG+T+ TA++S S ++V + AMTGE+TLRG VLPVGGV
Sbjct: 663 ENYDIHIHVPKGAIPKDGPSAGITITTAIISALSGRKVNSKVAMTGEITLRGRVLPVGGV 722
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+ K+LAAHR GI+ VI+ E N K+L EVP + LE + M++V + A
Sbjct: 723 ESKVLAAHRAGIETVIMSEENEKNLDEVPDNIKRDLEFKFVEHMDEVTDTAL 774
>gi|262199864|ref|YP_003271073.1| ATP-dependent protease La [Haliangium ochraceum DSM 14365]
gi|262083211|gb|ACY19180.1| ATP-dependent protease La [Haliangium ochraceum DSM 14365]
Length = 798
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 330/757 (43%), Positives = 467/757 (61%), Gaps = 81/757 (10%)
Query: 70 YIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMEL 129
Y +VLEG R ++ LST ++ A IS+ P+ A S + +A +
Sbjct: 87 YQLVLEGQGRVRIESLSTAHPHWRAEISAA-------------PEIAADSPEARAL---V 130
Query: 130 ISVLEQKQKTGGRTKVLLE------TVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
S+ E+ G T+ L + T + AD+ A+ ++ +++ +L +D+ RL
Sbjct: 131 DSIRERLDSLGTMTRELKQRLAQASTQAPGRFADLLAAALDLPADKEFPLLLELDIPARL 190
Query: 184 SKATELVDRHLQSIRVAE---KITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 240
E R L++ +AE I +V+ +L K Q+E LLRQQ++AI++ELG+ D+D D
Sbjct: 191 RLIHE---RLLEAEAMAEIRKTINGQVQKELGKHQREMLLRQQLQAIQKELGE-DEDGDA 246
Query: 241 LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI 300
L K+ + +P + K V KE+RRL++M QP + YLEL+A+LPW++ +
Sbjct: 247 TSELRDKIAALELPEEVAKAVSKEMRRLERMNSNQPEHHMLVKYLELVAELPWDRRVD-T 305
Query: 301 DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 360
D ++ + +LD+DHYGL VK+R++E+LAVRK+ RG +LC VGPPGVGKTSL SI
Sbjct: 306 DDEIAHIEAKLDADHYGLEDVKKRVLEHLAVRKVTGGQRGAILCLVGPPGVGKTSLGQSI 365
Query: 361 ASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTG 420
A A GR F+R++LGGV+DEA+IRGHRRTYIG++PGR++ + + GV NP++LLDEIDK G
Sbjct: 366 ADATGRPFVRVALGGVRDEAEIRGHRRTYIGALPGRILRAMTKAGVKNPIVLLDEIDKLG 425
Query: 421 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVI 480
G P +ALLEVLDPEQN TF DHYL PFDLS+V+F+ TAN + + PPL DR+E++
Sbjct: 426 QGWGGSPEAALLEVLDPEQNHTFTDHYLEQPFDLSEVLFLCTANTLETLSPPLRDRLEIV 485
Query: 481 ELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNL 540
EL GYT +EK+ IA HL+P+ L++HGL ++ + + +A ++ ++ YTREAGVR L R L
Sbjct: 486 ELQGYTVQEKVHIARNHLLPKKLEEHGLTADSVSVSDAALQAIVHDYTREAGVRQLAREL 545
Query: 541 AALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSN 600
RA ++ A + +E+ + H
Sbjct: 546 TRACRAVTLERARRPEEKVA---------------------------------TRH---- 568
Query: 601 TFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
+DEA + + LG PRF D EAAER A PGI+ GL WT GG++ F+E + M
Sbjct: 569 ---------IDEAAVSEYLGKPRFFD-EAAERTAIPGIATGLAWTPVGGDILFIETSRMP 618
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPK 720
GKG + TG+LG+V+KESA+ AL++VR+ A +L + + L+ D+HIH PAGA PK
Sbjct: 619 GKGRIETTGKLGEVMKESARAALSYVRSHADELGVSG----DFLEREDVHIHVPAGATPK 674
Query: 721 DGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVI 780
DGPSAGVT+ TAL SL + + VRADTAMTGE TLRG VLPVGG+K K+LAAHR G+ RVI
Sbjct: 675 DGPSAGVTIFTALSSLLTGRCVRADTAMTGECTLRGRVLPVGGIKSKVLAAHRAGLSRVI 734
Query: 781 LPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LP +N +D+ EVP V +E I A+ M VL A E
Sbjct: 735 LPSKNRRDIDEVPEDVREQMEFIFAEDMSQVLAAALE 771
>gi|50120089|ref|YP_049256.1| DNA-binding ATP-dependent protease La [Pectobacterium atrosepticum
SCRI1043]
gi|49610615|emb|CAG74060.1| ATP-dependent protease la [Pectobacterium atrosepticum SCRI1043]
Length = 793
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 326/761 (42%), Positives = 460/761 (60%), Gaps = 81/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAHAEYLDSPAIDEREQEVLMRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLTDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRGRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++L+ M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIEAAKMPKDAREKAEAELQKLRMMSPMSAEATVVRSYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD+DHYGL RVK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLLKAQEMLDTDHYGLDRVKERILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKKGELSVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ + M +ST
Sbjct: 544 LEREISKLCRKA--------------------------------------VKTLLMDKST 565
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
+ + L+ LG RFD A + G GL WT GG++ +E
Sbjct: 566 KHIQ----------ISGDNLKDFLGVQRFDYGRADDENRV-GQVTGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H P
Sbjct: 615 TACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINA----DFYEKRDIHVHVPE 670
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR G
Sbjct: 671 GATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHRGG 730
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
IK V++P+ N +DL E+P V+A LEI KR+E+VL A
Sbjct: 731 IKTVLIPDDNKRDLEEIPQNVIADLEIHPVKRIEEVLALAL 771
>gi|398847902|ref|ZP_10604776.1| ATP-dependent protease La [Pseudomonas sp. GM84]
gi|398250860|gb|EJN36152.1| ATP-dependent protease La [Pseudomonas sp. GM84]
Length = 798
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 335/774 (43%), Positives = 466/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ S + A +S ++ T
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFSEVEGHIRAEVSLIDETD----- 117
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
A R+ + L+S EQ + G + +VL I +L D A
Sbjct: 118 --------AAERESEVFVRTLLSQFEQYVQLGKKVPAEVLSSLNSIEEPGRLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQEILEIVDLSTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRS 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +PW KA ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RGPVL
Sbjct: 290 YLDWLVQVPW-KAQSKVRLDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIASA RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIASATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTS 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL E L+I + ++ +
Sbjct: 469 N-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLTPKQVKANGLKKEELEIDVSAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR LER +A + R
Sbjct: 528 IRYYTREAGVRGLERQIAKVCRKV------------------------------------ 551
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
+ E T + ++TS LE +LG +F AE+ G GL
Sbjct: 552 -------VKEHTGQKQVKVKVTS------EQLEHLLGIRKF-RYGLAEQQDQIGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +E+ + GKG+L TG LGDV+ ES A T VR+RA L + A +
Sbjct: 598 WTQVGGELLTIESVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|86749683|ref|YP_486179.1| ATP-dependent protease La [Rhodopseudomonas palustris HaA2]
gi|86572711|gb|ABD07268.1| Lon-A peptidase. Serine peptidase. MEROPS family S16
[Rhodopseudomonas palustris HaA2]
Length = 812
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 323/755 (42%), Positives = 449/755 (59%), Gaps = 71/755 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EGL R V+ + R YY A+ S+ T E + E ALSR
Sbjct: 91 PDGTVK--VLVEGLARARVESYTDRTEYYEAQAQSIADTDAESVEAE------ALSRSVV 142
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ + + K+ + V+ KL D + + ++ +L+++ + RL
Sbjct: 143 SDFESYVKL--NKKISAEVVGVVQSITDFAKLGDTVASHLAVKIADRQGILETLSVTARL 200
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K L++ + ++V ++I +V+ Q+ K+Q+E+ L +QM+AI++ELGD D+ D+L
Sbjct: 201 EKVLGLMESEISVLQVEKRIRSRVKRQMEKTQREYYLNEQMKAIQKELGD-DEGRDELAD 259
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
LE K+ + + Q EL++L++M P T R YL+ + +PW K S+ + D
Sbjct: 260 LEEKIAKTKLSKEAREKAQHELKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSK-VKKD 318
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L+AA+ LDSDHYGL +VK+RI+EYLAV+ GP+LC VGPPGVGKTSL SIA A
Sbjct: 319 LEAAQATLDSDHYGLEKVKERIVEYLAVQSRANKLSGPILCLVGPPGVGKTSLGKSIAKA 378
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
GR+F+R+SLGGV+DEA+IRGHRRTYIGSMPG++I +++ NP+ LLDEIDK G+D
Sbjct: 379 TGREFVRVSLGGVRDEAEIRGHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADF 438
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP+SALLEVLDPEQN TFNDHYL V +DLS V+F+ TAN IP PL+DRME+I +
Sbjct: 439 RGDPSSALLEVLDPEQNSTFNDHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIA 497
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA +HLIP L +HGL S+ I + + L+I+RYTREAGVRNLER L+ L
Sbjct: 498 GYTENEKVEIARKHLIPLALTKHGLDSKEWSIDDDALLLMIRRYTREAGVRNLERELSTL 557
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
AR A ++ L K V
Sbjct: 558 ARKAV-------KDLMLSKKKSVK------------------------------------ 574
Query: 604 ITSPLVVDEAMLEKVLGPP--RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRG 661
V E +E+ LG P RF + E ++V G+ GL WT+ GGE+ +E+ M G
Sbjct: 575 ------VTEKAIEEYLGVPKFRFGEIELEDQV---GVVTGLAWTDVGGELLTIESVMMPG 625
Query: 662 KGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKD 721
KG + +TG L DV+KES A ++VR+RA + + RDIH+H P GA PKD
Sbjct: 626 KGRMTVTGNLRDVMKESISAAASYVRSRAITFGIEPP----FFERRDIHVHVPEGATPKD 681
Query: 722 GPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVIL 781
GPSAGV + T +VS+ + +R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++
Sbjct: 682 GPSAGVAMATTIVSVLTGIPIRRDIAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLI 741
Query: 782 PERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
PE N KDL E+ A+ L II RM++V+ A
Sbjct: 742 PEDNAKDLTEISDAIKGGLNIIPVARMDEVIANAL 776
>gi|384418136|ref|YP_005627496.1| ATP-dependent protease La [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353461050|gb|AEQ95329.1| ATP-dependent protease La [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 823
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 336/780 (43%), Positives = 480/780 (61%), Gaps = 63/780 (8%)
Query: 43 IHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT 102
+ H G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 66 VDLHTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVYKVVEQDGALQGQGTEVEAS 120
Query: 103 KIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLAD 157
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 121 D------AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLAD 168
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
A + ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E
Sbjct: 169 TIAAHIGVRLADKQRLLEITDVGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQRE 228
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 229 YYLNEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAE 288
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+
Sbjct: 289 AAVVRNYLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQ 347
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL
Sbjct: 348 MKGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRL 407
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+ L +VG NP++LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V
Sbjct: 408 VQNLNKVGSKNPLLLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEV 467
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ + +GL E ++I
Sbjct: 468 MFVATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIAMRYLVPKQIKANGLKPEEIEIGG 526
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
++ +++ YTRE+GVRNLER +A + R ++A
Sbjct: 527 DAIQDIVRYYTRESGVRNLEREVAKICRKVVKEIA------------------------- 561
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
LA P + V+ + + + V+ L+K LG RFD A E G
Sbjct: 562 LAG---------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-G 611
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+ GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 612 LVTGLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI-- 669
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ +RAD AMTGE+TLRG
Sbjct: 670 --DVDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSVLTKVPIRADVAMTGEITLRGR 727
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
V +GG+K+K+LAA R GI+ V++P N KDL ++PA V L+I+ K +++VL+ A E
Sbjct: 728 VSAIGGLKEKLLAALRGGIRTVLIPGENRKDLADIPANVTRDLKIVPVKWIDEVLDLALE 787
>gi|56964399|ref|YP_176130.1| ATP-dependent Lon protease [Bacillus clausii KSM-K16]
gi|56910642|dbj|BAD65169.1| ATP-dependent Lon protease [Bacillus clausii KSM-K16]
Length = 775
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 321/755 (42%), Positives = 456/755 (60%), Gaps = 75/755 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T + +EG+ R + G +S E+ + E D + AL R
Sbjct: 86 TVRIQVEGIQRGEITSFKDYGDVLVVDVSLFEVKR------EGDIESEALMRT------- 132
Query: 129 LISVLEQKQKTGGRT-----KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
L+S+ EQ K R L ET +D A+ + ++ +L+ +D+ RL
Sbjct: 133 LLSMYEQFAKQSKRASQETVNSLRETTDPELFSDTVAANLTLKLTQKQELLELIDVNKRL 192
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K E + + + + KI Q+V+ + K+QKE+ LR+QM+AI++ELGD + ++
Sbjct: 193 HKLIERLGNEQEVLGLERKIGQRVKKAMEKTQKEYYLREQMKAIQKELGDREGRTGEIAE 252
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELIADLPWEKASEEIDL 302
L K+ +AGMP ++++ KEL R +KM P G +S R YL+ + LPW+ +E+ +L
Sbjct: 253 LREKIDAAGMPEHVYEKAIKELGRYEKM-PANAGESSILRTYLDWLIQLPWKNETED-EL 310
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
D+ A+ L+ DHYGL +VK+R++EYLAVR+L +GP+LC GPPGVGKTSLA SIA
Sbjct: 311 DVGRAEAILNEDHYGLDKVKERVLEYLAVRQLTKSMKGPILCLAGPPGVGKTSLARSIAR 370
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
+L R+F+R+SLGGV+DEA+IRGHRRTY+G+MPGRLI G+KR G NPV LLDEIDK D
Sbjct: 371 SLNREFVRMSLGGVRDEAEIRGHRRTYVGAMPGRLIQGMKRAGTINPVFLLDEIDKMAQD 430
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
RGDPASALLEVLDPEQN TF+DHYL +DLSKV+FV TAN IP PLLDRME+I +
Sbjct: 431 FRGDPASALLEVLDPEQNSTFSDHYLEEAYDLSKVMFVTTANNIATIPGPLLDRMEIISI 490
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
PGYT EKL IA +L+P+ + +HGL LQ +K VI+ YTREAGVR LER LA
Sbjct: 491 PGYTELEKLEIAQSYLLPKQVSEHGLKKSTLQAKPEALKKVIRYYTREAGVRGLERQLAT 550
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
L R AA + E+++ + + K V
Sbjct: 551 LCRKAAKMIVMNERKRVVLTEKMV------------------------------------ 574
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
E +LG PRF AE G + GL +T+ GG +E +A+ GK
Sbjct: 575 -------------ETMLGKPRF-RYGMAEVEDQVGAATGLAYTSAGGTTLAIEVSAVPGK 620
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
G+L LTG+LGDV+KESAQ A +++R+R+ +L++ + G N + DIHIH P GA PKDG
Sbjct: 621 GKLTLTGKLGDVMKESAQAAFSYIRSRSKELEI--DPGFN--EKTDIHIHVPEGATPKDG 676
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAG+T+ TAL+S + ++V + MTGE+TLRG VLP+GG+K+K ++AHR GI+ +I+P
Sbjct: 677 PSAGITMATALISALTGRKVDREVGMTGEITLRGRVLPIGGLKEKAMSAHRAGIRTIIIP 736
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+ N +D+ ++P +V L+I+ +++VL+ A +
Sbjct: 737 KDNERDVDDIPESVRKELKIVSVSHLDEVLKVALK 771
>gi|429099393|ref|ZP_19161499.1| ATP-dependent protease La Type I [Cronobacter dublinensis 582]
gi|426285733|emb|CCJ87612.1| ATP-dependent protease La Type I [Cronobacter dublinensis 582]
Length = 787
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 332/769 (43%), Positives = 465/769 (60%), Gaps = 86/769 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGDHFAAKAEYLESPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLSDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDINERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L +++ ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKENEIEVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLK---------------- 566
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
RI ++ L+ LG RFD ++ RV G GL WT GG++
Sbjct: 567 -------RIE----INGDNLKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + + + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINS----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
GIK V++P+ N +DL E+P V+A LEI KR+E+VL A + P+
Sbjct: 729 GGIKTVLIPDENKRDLEEIPENVIADLEIHPVKRIEEVLSLALQ-NAPY 776
>gi|257092782|ref|YP_003166423.1| ATP-dependent protease La [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257045306|gb|ACV34494.1| ATP-dependent protease La [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 790
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 322/756 (42%), Positives = 463/756 (61%), Gaps = 78/756 (10%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T+++V +GL RF + E + + ARI ++ E E + D + A + Q + A+E
Sbjct: 103 THVIVCQGLQRFRIAEYLSGYPFPVARIGRID----EPEAI--DSEVEARTIQLRERALE 156
Query: 129 LISVLEQ-KQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKAT 187
++ L Q Q+ G K L++ L D+ + EI E+ +L+++DL+ RL
Sbjct: 157 VLQFLPQVSQELLGAVKSLVQP---GALTDLVASVAEIKIAERQQVLETIDLRRRLDLVL 213
Query: 188 ELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND-DDEDDLVALER 246
+ R L+ +R++ +I ++ + + + Q+E+LLR+Q+++I++ELG+ D + ++ AL +
Sbjct: 214 GCLQRRLEVLRLSREIDERAKASIDQHQREYLLREQLKSIQKELGEGDAGNSSEIEALRK 273
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
+ A MP + KEL+RL++M + R YL+ + +LPW K E +++
Sbjct: 274 AIAEAEMPEEVATQANKELKRLERMSDGSAESSMIRAYLDWLVELPW-KEPEPDRIEIGE 332
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A+ L+ DH+GL ++K+RIIE+LAVRKL P GP+LCFVGPPGVGKTSL SIA ALGR
Sbjct: 333 ARRILEGDHFGLDQIKKRIIEFLAVRKLNPGGHGPILCFVGPPGVGKTSLGQSIARALGR 392
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
KF+R SLGG DEA+IRGHRRTYIG++PG +I +++ G VM+LDEIDK GS ++GD
Sbjct: 393 KFVRASLGGCHDEAEIRGHRRTYIGALPGNIIQAIRKAGSRGCVMMLDEIDKLGSGIQGD 452
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
P++ALLEVLDPEQN TF D+YL +P+DLS+++F+ TAN IP PL DRME+I+LPGYT
Sbjct: 453 PSAALLEVLDPEQNNTFRDNYLALPYDLSRMLFITTANVLDNIPGPLRDRMEIIQLPGYT 512
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EEK IA R+L+ R + Q+GL ++ +A + +I+ YTREAGVR+LER + A+ R
Sbjct: 513 QEEKREIARRYLVGRQIVQNGLKEGQIEFSDASLTAIIRDYTREAGVRSLERQIGAVCRR 572
Query: 547 AAVKVAE------QEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSN 600
AAV +AE Q +E LP+ LG DN +A + GE+
Sbjct: 573 AAVNIAEGTLNAMQVEENDLPAI-----LGPGKYDNEVA---------LRTGEA------ 612
Query: 601 TFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
G++ GL WT GG++ F+EA+
Sbjct: 613 ------------------------------------GVATGLAWTPVGGDILFIEASRTS 636
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPK 720
G G+L LTGQLG+V+KESAQ ALT + RA L L + ++H+H PAGA+PK
Sbjct: 637 GDGKLILTGQLGEVMKESAQAALTLAKTRAASLGLDPAG----FEKVNVHVHVPAGAIPK 692
Query: 721 DGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVI 780
DGPSAGV + AL SLF+ + VR DTAMTGE++LRGLVLPVGG+KDK+LAA R GI+RV+
Sbjct: 693 DGPSAGVAMFIALASLFAERPVRNDTAMTGEISLRGLVLPVGGIKDKVLAAMRAGIQRVM 752
Query: 781 LPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP RN +DL EVPA LE I + ++D + A
Sbjct: 753 LPARNRRDLEEVPAEAKEKLEFIFLENVDDAVRNAM 788
>gi|433613031|ref|YP_007189829.1| ATP-dependent protease La [Sinorhizobium meliloti GR4]
gi|429551221|gb|AGA06230.1| ATP-dependent protease La [Sinorhizobium meliloti GR4]
Length = 806
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 324/789 (41%), Positives = 457/789 (57%), Gaps = 73/789 (9%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ A+D + I+ G A L L ++ P G V V++EG R ++ + R
Sbjct: 57 TQINATDDDPEPSAIY--KVGTIANVLQL---LKLPDGTVK--VLVEGRSRAEIERYTPR 109
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT-KVLL 147
+Y A +L E D D + + ++ E S ++ +K V
Sbjct: 110 DDFYEAMAHALP---------EPDEDPVEIEALSRSIVSEFESYVKLNKKISPEVVGVAS 160
Query: 148 ETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKV 207
+ KLAD + I E+ ML++ +K+RL KA ++ + ++V ++I +V
Sbjct: 161 QIEDYSKLADTVASHLSIKIVEKQEMLETTSVKMRLEKALGFMEGEISVLQVEKRIRSRV 220
Query: 208 EGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
+ Q+ K+Q+E+ L +QM+AI++ELGD++D D++ LE ++ + + EL++
Sbjct: 221 KRQMEKTQREYYLNEQMKAIQKELGDSEDGRDEMAELEERISKTKLSKEAREKADAELKK 280
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
L++M P T R YL+ + LPW K S+ I DL A++ LD+DH+GL +VK+RI+E
Sbjct: 281 LRQMSPMSAEATVVRNYLDWLLGLPWGKKSK-IKSDLNHAEKVLDTDHFGLDKVKERIVE 339
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAV+ +GP+LC VGPPGVGKTSLA SIA A GR++IR++LGGV+DEA+IRGHRR
Sbjct: 340 YLAVQARSSKIKGPILCLVGPPGVGKTSLAKSIAKATGREYIRMALGGVRDEAEIRGHRR 399
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN TF DHY
Sbjct: 400 TYIGSMPGKVVQSMKKAKKSNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNSTFMDHY 459
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
L V +DLS V+F+ TAN IPPPL+DRMEVI + GYT +EK IA RHL+P+ + H
Sbjct: 460 LEVEYDLSNVMFITTANTLN-IPPPLMDRMEVIRIAGYTEDEKREIAKRHLLPKAIRDHA 518
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + + + VIQ YTREAGVRN ER L LAR A ++ + + ++ +++++H
Sbjct: 519 LQPNEFSVTDGALMAVIQNYTREAGVRNFERELMKLARKAVTEILKGKTKKVEVTAENIH 578
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDR 627
LG PRF
Sbjct: 579 -------------------------------------------------DYLGVPRFRHG 589
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E AER G+ GL WT GGE+ +E M GKG + +TG L DV+KES A ++VR
Sbjct: 590 E-AERDDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYVR 648
Query: 688 ARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTA 747
+RA D + L RDIH+H P GA PKDGPSAGV + TA+VS+ + + D A
Sbjct: 649 SRAIDFGIEPP----LFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVMTGIPISKDVA 704
Query: 748 MTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKR 807
MTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL ++P V SLEII R
Sbjct: 705 MTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPDNVKNSLEIIPVSR 764
Query: 808 MEDVLEQAF 816
M +V+ A
Sbjct: 765 MGEVIAHAL 773
>gi|127513434|ref|YP_001094631.1| ATP-dependent protease La [Shewanella loihica PV-4]
gi|126638729|gb|ABO24372.1| Lon-A peptidase. Serine peptidase. MEROPS family S16 [Shewanella
loihica PV-4]
Length = 785
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 313/666 (46%), Positives = 430/666 (64%), Gaps = 59/666 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + E++ +L+ V++ RL +++ + ++V ++I +V+ Q+ K
Sbjct: 164 RLADTMAAHMPLKLEDKQAVLEMVNVSERLEYLMAMMESEIDLLQVEKRIRSRVKKQMEK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELGD D+ D+ L RK++ AGMPS + EL +LK M P
Sbjct: 224 SQREYYLNEQMKAIQKELGDIDESHDEFETLTRKIEEAGMPSEAKEKATAELNKLKMMSP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + +PW++ S+ I DL A++ LD+DHYGL +VK+RI+EYLAV+
Sbjct: 284 MSAEATVVRSYVDWMISVPWKQRSK-IKRDLAKAQDVLDTDHYGLEKVKERILEYLAVQS 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 343 RVKQLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSM 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG++I + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TF+DHYL V +D
Sbjct: 403 PGKVIQKMSKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFSDHYLEVDYD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA +HL+P+ ++++GL + +
Sbjct: 463 LSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLLPKQIERNGLKASEV 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ E+ + +I+ YTREAGVR LER L+ + R KV +Q
Sbjct: 522 NVDESAIIGIIRYYTREAGVRALERELSKICR----KVVKQ------------------- 558
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
I + +S V V++ L+ LG RF D AE
Sbjct: 559 ---------------ILLDKSVKHVD----------VNQDNLKSFLGVQRF-DYGKAESN 592
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L
Sbjct: 593 NQIGQVTGLAWTEVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQL 652
Query: 694 QLVAEDGMN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
G+N + RDIH+H P GA PKDGPSAG + TALVS + VRAD AMTGE
Sbjct: 653 ------GINPDFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRADVAMTGE 706
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+K+K+LAAHR G K V++P+ N +DL E+PA V+A LEI + +++V
Sbjct: 707 ITLRGEVLPIGGLKEKLLAAHRGGTKLVLIPKENERDLEEIPANVVADLEIRPVRWVDEV 766
Query: 812 LEQAFE 817
L+ A E
Sbjct: 767 LKLALE 772
>gi|300721989|ref|YP_003711269.1| DNA-binding ATP-dependent protease La [Xenorhabdus nematophila ATCC
19061]
gi|297628486|emb|CBJ89053.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Xenorhabdus nematophila ATCC 19061]
Length = 784
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 331/764 (43%), Positives = 462/764 (60%), Gaps = 85/764 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EG R + L+ G Y+ A++ LE +I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGFQRARITTLTDNGEYFYAQVEYLESPEIDEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ L+++ + + +E + KLAD A + ++ +L+
Sbjct: 142 VKLNKKIPPEVLTSLHSIED----------------VAKLADTIAAHMPLKINDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ R+ +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVVERIEYLIAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ L+RK+++A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYETLKRKIENAKMPKEAREKAEAELQKLKMMSPMSAEATVVRSYIDWMVQVPW-V 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD+DHYGL RVK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLVKAQEVLDTDHYGLERVKERILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + ++GV NP+ LLDE
Sbjct: 365 LGRSIARATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMSKIGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVTFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L I + + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELSIDDGAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A +AL L+D L
Sbjct: 544 LEREISKLCRKAV---------KAL------------LMDKTLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG R D A RV G GL WT GG++
Sbjct: 568 ------------IEINAENLKDYLGVQRVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E ++ GKG+L TG LG+V++ES Q ALT VRARA L + + + + RDIH+H
Sbjct: 613 IETASVSGKGKLTYTGSLGEVMQESIQAALTVVRARADKLGISS----DFHEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GIK V++P+ N +DL E+P V+ LEI KR+EDVL A +
Sbjct: 729 GGIKTVVIPDENKRDLEEIPQNVIQDLEIHPVKRIEDVLSIALQ 772
>gi|317047177|ref|YP_004114825.1| ATP-dependent protease La [Pantoea sp. At-9b]
gi|316948794|gb|ADU68269.1| ATP-dependent protease La [Pantoea sp. At-9b]
Length = 784
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 327/771 (42%), Positives = 465/771 (60%), Gaps = 90/771 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + L+ G ++ A+ L +IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRAHITTLADNGDHFVAQAEYLISPEIEEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTVAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP+ + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYEALKRKIEAAKMPTEAREKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRKAQETLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKEKEISVDDSAIMGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A +AL L+D
Sbjct: 544 LERELSKLCRKAV---------KAL------------LMD-------------------- 562
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
+ + ++ L+ LG RFD ++ RV G GL WT GG++
Sbjct: 563 -------KAKKHITINGDNLKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VR+D AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRSDVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
HR GIK V++P+ N +DL E+P V+A L I KR+E+VL A E P+
Sbjct: 727 HRGGIKTVLIPDENKRDLEEIPQNVIADLTIHPVKRIEEVLNLALE-NAPY 776
>gi|398353148|ref|YP_006398612.1| Lon protease Lon [Sinorhizobium fredii USDA 257]
gi|390128474|gb|AFL51855.1| Lon protease Lon [Sinorhizobium fredii USDA 257]
Length = 805
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 332/790 (42%), Positives = 460/790 (58%), Gaps = 75/790 (9%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ A+D + I+ G A L L ++ P G V V++EG R + + R
Sbjct: 56 TQINATDDDPEPSAIY--RVGTIANVLQL---LKLPDGTVK--VLVEGRARAEIDRYTAR 108
Query: 89 GTYYTARISSLEMTKIEMEQVEQDP-DFIALSRQFKATAMELISVLEQKQKTGGRTKVLL 147
+Y A L + E+DP + ALSR + E S ++ +K +
Sbjct: 109 EDFYEAVAHVLR-------EPEEDPVEIEALSR---SVVSEFESYVKLNKKISPEVVGVA 158
Query: 148 ETVPIH-KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQK 206
+ + KLAD + I E+ ML++ +K+RL KA ++ + ++V ++I +
Sbjct: 159 SQIDDYSKLADTVASHLSIKIVEKQEMLETTSVKMRLEKALGFMEGEISVLQVEKRIRSR 218
Query: 207 VEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELR 266
V+ Q+ K+Q+E+ L +QM+AI++ELGD++D D++ LE ++ + + EL+
Sbjct: 219 VKRQMEKTQREYYLNEQMKAIQKELGDSEDGRDEMAELEERIAKTKLSKEAREKADAELK 278
Query: 267 RLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRII 326
+L++M P T R YL+ + LPW K S+ I DL A++ L+ DH+GL +VK+RI+
Sbjct: 279 KLRQMSPMSAEATVVRNYLDWLLGLPWGKKSK-IKTDLNHAEKVLELDHFGLDKVKERIV 337
Query: 327 EYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHR 386
EYLAV+ +GP+LC VGPPGVGKTSLA SIA A GR++IR++LGGV+DEA+IRGHR
Sbjct: 338 EYLAVQARSTKIKGPILCLVGPPGVGKTSLAKSIAKATGREYIRMALGGVRDEAEIRGHR 397
Query: 387 RTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDH 446
RTYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN TF DH
Sbjct: 398 RTYIGSMPGKVVQSMKKAKRSNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNSTFMDH 457
Query: 447 YLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQH 506
YL V +DLS V+F+ TAN IPPPL+DRMEVI + GYT EEKL IA RHL+P+ + H
Sbjct: 458 YLEVEYDLSNVMFITTANTLN-IPPPLMDRMEVIRIAGYTEEEKLEIAKRHLLPKAIRDH 516
Query: 507 GLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDV 566
L + + + VIQ YTREAGVRN ER L LAR A ++ + + ++
Sbjct: 517 ALQPNEFSVTDGALMAVIQTYTREAGVRNFERELMKLARKAVTEILKGKTKKV------- 569
Query: 567 HRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDD 626
E T + N + LG PRF
Sbjct: 570 --------------------------EVTADNVNDY----------------LGVPRFRH 587
Query: 627 REAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWV 686
E AER G+ GL WT GGE+ +E M GKG + +TG L DV+KES A ++V
Sbjct: 588 GE-AERDDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYV 646
Query: 687 RARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADT 746
R+RA D + L RDIH+H P GA PKDGPSAGV + TA+VS+ + + D
Sbjct: 647 RSRAIDFGIEPP----LFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVMTGIPIHKDV 702
Query: 747 AMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAK 806
AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL E+P V +LEII
Sbjct: 703 AMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLAEIPDNVKNNLEIIPVS 762
Query: 807 RMEDVLEQAF 816
RM +VLE A
Sbjct: 763 RMGEVLEHAL 772
>gi|418517009|ref|ZP_13083177.1| ATP-dependent serine proteinase La [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410706222|gb|EKQ64684.1| ATP-dependent serine proteinase La [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 823
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 337/787 (42%), Positives = 481/787 (61%), Gaps = 63/787 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A+ L L ++ P G T V++EGL R +V ++ + R + +E +
Sbjct: 69 YTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGRGTEIEASD-- 121
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 122 ----AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL+
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V+FV
Sbjct: 411 LNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E ++I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIKANGLKPEEIEIASDAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 530 QDIVRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
P + V+ + + + V+ L+K LG RFD A E G+
Sbjct: 565 ---------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-GLVT 614
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 615 GLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----D 670
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ +R +RAD AMTGE+TLRG V
Sbjct: 671 VDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSILTRVPIRADVAMTGEITLRGRVSA 730
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGC 820
+GG+K+K+LAA R GI+ V++P+ N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 731 IGGLKEKLLAALRGGIRTVLIPDENRKDLADIPPNVTRDLKIVPVKWIDEVLDLALERPL 790
Query: 821 PWRQHSK 827
++ SK
Sbjct: 791 TPKKASK 797
>gi|407720201|ref|YP_006839863.1| Lon protease [Sinorhizobium meliloti Rm41]
gi|407318433|emb|CCM67037.1| Lon protease [Sinorhizobium meliloti Rm41]
Length = 806
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 323/789 (40%), Positives = 457/789 (57%), Gaps = 73/789 (9%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ A+D + I+ G A L L ++ P G V V++EG R ++ + R
Sbjct: 57 TQINATDDDPEPSAIY--KVGTIANVLQL---LKLPDGTVK--VLVEGRSRAEIERYTPR 109
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT-KVLL 147
+Y A +L E D D + + ++ E S ++ +K V
Sbjct: 110 DDFYEAMAHALP---------EPDEDPVEIEALSRSVVSEFESYVKLNKKISPEVVGVAS 160
Query: 148 ETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKV 207
+ KLAD + I E+ ML++ +K+RL KA ++ + ++V ++I +V
Sbjct: 161 QIEDYSKLADTVASHLSIKIVEKQEMLETTSVKMRLEKALGFMEGEISVLQVEKRIRSRV 220
Query: 208 EGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
+ Q+ K+Q+E+ L +QM+AI++ELGD++D D++ LE ++ + + EL++
Sbjct: 221 KRQMEKTQREYYLNEQMKAIQKELGDSEDGRDEMAELEERISKTKLSKEAREKADAELKK 280
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
L++M P T R YL+ + LPW K S+ I DL A++ LD+DH+GL +VK+RI+E
Sbjct: 281 LRQMSPMSAEATVVRNYLDWLLGLPWGKKSK-IKTDLNHAEKVLDTDHFGLDKVKERIVE 339
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAV+ +GP+LC VGPPGVGKTSLA SIA A GR++IR++LGGV+DEA+IRGHRR
Sbjct: 340 YLAVQARSSKIKGPILCLVGPPGVGKTSLAKSIAKATGREYIRMALGGVRDEAEIRGHRR 399
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN TF DHY
Sbjct: 400 TYIGSMPGKVVQSMKKAKKSNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNSTFMDHY 459
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
L V +DLS V+F+ TAN IPPPL+DRMEVI + GYT +EK IA RHL+P+ + H
Sbjct: 460 LEVEYDLSNVMFITTANTLN-IPPPLMDRMEVIRIAGYTEDEKREIAKRHLLPKAIRDHA 518
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L + + + VIQ YTREAGVRN ER L LAR A ++ + + ++ +++++H
Sbjct: 519 LQPNEFSVTDGALMAVIQNYTREAGVRNFERELMKLARKAVTEILKGKTKKVEVTAENIH 578
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDR 627
LG PRF
Sbjct: 579 -------------------------------------------------DYLGVPRFRHG 589
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
E AER G+ GL WT GGE+ +E M GKG + +TG L DV+KES A ++VR
Sbjct: 590 E-AERDDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYVR 648
Query: 688 ARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTA 747
+RA D + L RDIH+H P GA PKDGPSAGV + TA+VS+ + + D A
Sbjct: 649 SRAIDFGIEPP----LFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVMTGIPISKDVA 704
Query: 748 MTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKR 807
MTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL ++P V +LEII R
Sbjct: 705 MTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPDNVKNNLEIIPVSR 764
Query: 808 MEDVLEQAF 816
M +V+ A
Sbjct: 765 MGEVIAHAL 773
>gi|373496131|ref|ZP_09586679.1| lon protease [Fusobacterium sp. 12_1B]
gi|404368996|ref|ZP_10974342.1| lon protease [Fusobacterium ulcerans ATCC 49185]
gi|313688288|gb|EFS25123.1| lon protease [Fusobacterium ulcerans ATCC 49185]
gi|371966042|gb|EHO83534.1| lon protease [Fusobacterium sp. 12_1B]
Length = 769
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 314/775 (40%), Positives = 470/775 (60%), Gaps = 75/775 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N GV L + V+ P+ + V++E R ++ + T Y A L+ T +
Sbjct: 63 YNIGVIVNILQI---VKMPNNNIK--VLVEAEDRVTIDGIEVGETEYKATYKILKCTNGK 117
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVP----IHKLADIFVA 161
++ E A+ R+ + + + + TG + LL + I+ DI +
Sbjct: 118 TKETE------AVYRKVLSYFEKYVGL------TGKISSELLVNLKGIKDINNAFDIISS 165
Query: 162 SFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLR 221
+ + E + +L+ D+K R K EL+ ++ + +KI KV+ +++++QK + ++
Sbjct: 166 NLPVKSEIRQELLEIFDIKERGYKLLELLTNEMEIASLEKKIDDKVKTKMNEAQKAYYIK 225
Query: 222 QQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS 281
+++ A+KEELGD D DD++ L K++ A +P + + + E+++L KM P T S
Sbjct: 226 EKISAMKEELGDYSQD-DDMLDLVEKLKKAKLPKEVKQKLDVEMKKLSKMPPFSAEATVS 284
Query: 282 RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGP 341
R Y+E + DLPWEK +++I LDLK A E L+ DHYGL K R+++YL+V+KL P+ +G
Sbjct: 285 RNYIETVLDLPWEKTTKDI-LDLKKANEILERDHYGLKDAKNRVLDYLSVKKLNPNMKGG 343
Query: 342 VLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 401
+LC GPPG+GKTSL SIA A+GRKF+R+SLGGV+DEA+IRGHRRTYIGSMPG+LI +
Sbjct: 344 ILCLAGPPGIGKTSLVKSIADAMGRKFVRVSLGGVRDEAEIRGHRRTYIGSMPGKLIKAM 403
Query: 402 KRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVA 461
K G NPV+LLDEIDK +D +GDPASA+LEVLDPEQN F DHY+++PFDLSKV FVA
Sbjct: 404 KDAGTKNPVILLDEIDKMSNDYKGDPASAMLEVLDPEQNSHFEDHYVDMPFDLSKVFFVA 463
Query: 462 TANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVK 521
TAN + + PPL DRME+I + YT EKL IA ++LI + +++GL + IP++++
Sbjct: 464 TANDLRNVSPPLRDRMEIINISSYTEFEKLHIAKKYLIKQAKEENGLKDYDIHIPDSVIM 523
Query: 522 LVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADG 581
+I YTREAGVRNL+R + L R A +V EQ++++
Sbjct: 524 KIIDEYTREAGVRNLKREIITLCRKIAREVVEQKKKK----------------------- 560
Query: 582 AEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVG 641
F I S + LEK+LG P+F +A E+ G+ G
Sbjct: 561 --------------------FTIKS------SSLEKLLGKPKFRPEKAKEKQPKQGVVNG 594
Query: 642 LVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGM 701
L WT+ GG V+ ++ GKGE+ LTG LG+V+KESAQ+A T+V+A +L +
Sbjct: 595 LAWTSVGGVTLEVQGVSIPGKGEISLTGTLGNVMKESAQVAFTYVKANLDKYKL---ENP 651
Query: 702 NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPV 761
+ ++IH+HFP GA PKDGPSAG+T+VTA++S+ + ++VR D AMTGE+T+ G VL +
Sbjct: 652 EFFEKKNIHLHFPEGATPKDGPSAGITIVTAILSVLTGRQVRQDIAMTGEVTITGDVLAI 711
Query: 762 GGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GGVK+K++ AHR GI+ VILP+ N D ++P+ V ++ I AK +DV + F
Sbjct: 712 GGVKEKVIGAHRAGIREVILPDDNRMDESDIPSEVAKTMTIHFAKTYDDVEKLVF 766
>gi|354492440|ref|XP_003508356.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Cricetulus
griseus]
Length = 507
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 282/505 (55%), Positives = 372/505 (73%), Gaps = 19/505 (3%)
Query: 320 RVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDE 379
++K+R++EYLAVR+LK + +GP+LCFVGPPGVGKTS+ S+A LGR+F RI+LGGV D+
Sbjct: 3 KLKRRVLEYLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQ 62
Query: 380 ADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQ 439
+DIRGHRRTY+GSMPGR+I+GLK VGV NPV LLDE+DK G ++GDPA+ALLEVLDPEQ
Sbjct: 63 SDIRGHRRTYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQ 122
Query: 440 NKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLI 499
N F DHYLNV FDLS+V+F+ATAN IPP LLDRME+I++PGYT EEK+ IA RHLI
Sbjct: 123 NHNFTDHYLNVAFDLSQVLFIATANTTATIPPALLDRMEIIQVPGYTQEEKIEIAHRHLI 182
Query: 500 PRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQA 559
P+ L+QHGL + +QIP+ +I RYTREAGVR+L+R A+ RA AVKVAE + ++A
Sbjct: 183 PKQLEQHGLTPQQIQIPQLTTLAIITRYTREAGVRSLDRKFGAICRAVAVKVAEGQHKEA 242
Query: 560 LPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT----SPLVVDEAML 615
DV ADG V+ + +S+T + P+++D L
Sbjct: 243 KLDRSDV------------ADGEGCREHVLEDAKP-EAISDTADLALPPEMPILIDFHAL 289
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
+ +LGPP + + E +ER++ PG+++GL WT GG++ FVEA+ M G+G+L LTGQLGDV+
Sbjct: 290 KDILGPPLY-ELEVSERLSQPGVAIGLAWTPLGGKIMFVEASRMDGEGQLTLTGQLGDVM 348
Query: 676 KESAQIALTWVRARATDLQLVAEDG-MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALV 734
KESA +A++W+R+ A L G +LL DIH+HFPAGAV KDGPSAGVT+VT L
Sbjct: 349 KESAHLAISWLRSNAKKYHLTNAFGSFDLLDNTDIHLHFPAGAVTKDGPSAGVTIVTCLA 408
Query: 735 SLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPA 794
SLFS + VR+D AMTGE+TLRGLVLPVGG+KDK+LAAHR G+K +I+P+RN KDL E+P+
Sbjct: 409 SLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKHIIIPQRNEKDLEEIPS 468
Query: 795 AVLASLEIILAKRMEDVLEQAFEGG 819
+ L + A +++VL AF+GG
Sbjct: 469 NIRQDLSFVTASCLDEVLNAAFDGG 493
>gi|197103210|ref|YP_002128588.1| ATP-dependent protease LA [Phenylobacterium zucineum HLK1]
gi|196480486|gb|ACG80013.1| ATP-dependent protease LA [Phenylobacterium zucineum HLK1]
Length = 792
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 329/773 (42%), Positives = 469/773 (60%), Gaps = 70/773 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G A L R V P G V +G+ RF + E + AR +T+ E
Sbjct: 75 HRMGTLANVL---RYVTGPDG--APHVACQGVERFEITEWLEGYPFIAAR--GRRITESE 127
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
+ E + F+ L Q A+E + +L Q + V + LAD+ A ++
Sbjct: 128 ADGPEIEARFLHLRSQ----ALEALQLLPQSPPAELVSAVEGASS-AATLADLVAAYLDL 182
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
E+ +L++VDL+ RL + + + + L+ +R+ +I Q+ L + Q++ LLR+QM
Sbjct: 183 QPPEKQEILETVDLQARLDRVSTFLAKRLEVLRLTSEIAQRTRESLGERQRQALLREQMA 242
Query: 226 AIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYL 285
AI+ ELG+ DD E+ LV LE + +AGMP + + +KELRRL + Y R YL
Sbjct: 243 AIQRELGETDDREE-LVELESAIGAAGMPEEVVQQARKELRRLARTPETAAEYGMVRTYL 301
Query: 286 ELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCF 345
E + +LPW KA E + LDL A+ LD DH+GL ++KQRI+E+LAVR+L P+ + P+LCF
Sbjct: 302 EWLVELPW-KAPEPVPLDLAEARRILDEDHFGLEKIKQRIVEHLAVRRLAPEGKAPILCF 360
Query: 346 VGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVG 405
VGPPGVGKTSL SIA A+ R F+R+SLGGV DE++IRGHRRTY+G++PG +I +++ G
Sbjct: 361 VGPPGVGKTSLGQSIARAMHRPFVRVSLGGVHDESEIRGHRRTYVGALPGNIIQAIRKAG 420
Query: 406 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 465
+ VM+LDEIDK + + GDP++ALLEVLDPEQN TF D+YL VPFDLS+V+F+ TAN
Sbjct: 421 RRDCVMMLDEIDKMSAGLHGDPSAALLEVLDPEQNATFRDNYLAVPFDLSRVVFLTTANM 480
Query: 466 AQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQ 525
IP PL DRME+I+L GYT EKL+IA R L+ R L+ +GL ++ ++I A ++ +I
Sbjct: 481 LDTIPGPLRDRMEIIQLSGYTAGEKLQIAERFLVRRQLEANGLKADQVEIDRAALERLIA 540
Query: 526 RYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEV 584
RYTREAGVR+LER + + R AV+ AE + + + D+ LG+P ++N EV
Sbjct: 541 RYTREAGVRSLEREIGRVLRHVAVRFAEGQADPVRITPDDLEPILGAPRVEN------EV 594
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
M R + PG++ GL W
Sbjct: 595 AM---------------------------------------------RTSVPGVATGLAW 609
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GGE+ F+EAT G+G L LTGQLG+V++ESAQ AL+ V++RA L + +L
Sbjct: 610 TPVGGEILFIEATRTPGEGRLILTGQLGEVMRESAQTALSLVKSRAEALGV----DPSLF 665
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
+ DIHIH PAGA PKDGPSAGV + AL+SL + + +R+DTAMTGE++LRGLVLPVGG+
Sbjct: 666 KDSDIHIHVPAGATPKDGPSAGVAMTMALISLLTDRTLRSDTAMTGEISLRGLVLPVGGI 725
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
K+K++AA G++RV+LP RN D ++P LE++ R+ED +E A +
Sbjct: 726 KEKVVAAATAGVRRVLLPARNRPDERDIPQETREQLELVWLDRIEDAIEAALD 778
>gi|339007537|ref|ZP_08640111.1| endopeptidase La [Brevibacillus laterosporus LMG 15441]
gi|338774740|gb|EGP34269.1| endopeptidase La [Brevibacillus laterosporus LMG 15441]
Length = 779
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 323/768 (42%), Positives = 456/768 (59%), Gaps = 89/768 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSL-----------EMTKIEMEQVEQD 112
P+G T V++EGL R S+ E + YY I+ L M + ++Q EQ
Sbjct: 83 PNG--TIRVLVEGLERASINEYLQKDDYYYVSITYLPETVENENEIEAMVRTVLQQFEQ- 139
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I +S++ + +S +++ GR +AD+ + + +++
Sbjct: 140 --YIKISKKVSPETLSSVSDIDE----AGR------------MADVIASHLPLKIKDKQD 181
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L++VD+ RL +++ + + + +I Q+V+ Q+ K+QKE+ LR+QM+AI++ELG
Sbjct: 182 VLEAVDVHRRLEILLNILNNEREVLELERRIGQRVKKQMEKTQKEYYLREQMKAIQKELG 241
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D D ++ L ++ + P I ++KEL RL KM + R Y++ + LP
Sbjct: 242 DRDGRNGEMDDLREQLLQSDAPERIKVKLEKELDRLDKMPATSAESSVVRTYIDTLLSLP 301
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W K +E+ +LD+ A+ L+ DHYGL + K+RI+EYLAV+KL D +GP+LC VGPPGVG
Sbjct: 302 WTKKTED-NLDIAHAESILNEDHYGLEKPKERILEYLAVQKLVSDLKGPILCLVGPPGVG 360
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSL SIA A+GRKFIRISLGGV+DEA+IRGHRRTY+G+MPGR+I +++ G NPV+L
Sbjct: 361 KTSLGRSIARAMGRKFIRISLGGVRDEAEIRGHRRTYVGAMPGRIIQSMRQAGTVNPVIL 420
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK SD RGDPASALLEVLDP QN+ F+DHY+ +DLS VIF+ TAN IP P
Sbjct: 421 LDEIDKLASDFRGDPASALLEVLDPNQNEKFSDHYVEEVYDLSNVIFLTTANTLHTIPRP 480
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIP-EAMVKLVIQRYTREA 531
LLDRME IE+ GYT EK I +L+P+ + HG+ E LQ+ EAM+K VI++YTREA
Sbjct: 481 LLDRMETIEISGYTELEKFHIMQDYLLPKNIKSHGITKEKLQVADEAMMK-VIRQYTREA 539
Query: 532 GVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPM 591
GVRNL R A L R AA + E+++ + + K + L
Sbjct: 540 GVRNLNREAANLCRKAAKIIVSGEKKRVVVTPKTLENL---------------------- 577
Query: 592 GESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEV 651
LG PRF AE+ G GL WT GG+
Sbjct: 578 ---------------------------LGKPRF-RYGLAEKEDQVGSVTGLAWTQVGGDT 609
Query: 652 QFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHI 711
VE + GKG L LTGQLGDV+KESAQ AL+++R+RA + E L+ DIHI
Sbjct: 610 LNVEVSVYPGKGTLTLTGQLGDVMKESAQAALSYIRSRAGQWDITQE----FLEKNDIHI 665
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA+PKDGPSAG+T+ TAL+S + VR + MTGE+TLRG VLP+GG+K+K+L+A
Sbjct: 666 HVPEGAIPKDGPSAGITMATALLSALTNIPVRKEVGMTGEITLRGRVLPIGGLKEKVLSA 725
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
HR G+ +ILP N KDL ++P +V + ++M+DV++ AF G
Sbjct: 726 HRAGLTTIILPIENEKDLEDIPESVKNDMTFHPVEQMDDVIKYAFVQG 773
>gi|374594564|ref|ZP_09667568.1| anti-sigma H sporulation factor, LonB [Gillisia limnaea DSM 15749]
gi|373869203|gb|EHQ01201.1| anti-sigma H sporulation factor, LonB [Gillisia limnaea DSM 15749]
Length = 816
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 319/774 (41%), Positives = 463/774 (59%), Gaps = 73/774 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H GV AR L R ++ P G T V+++G RF + E+ + Y TA I + E
Sbjct: 102 HQTGVVARIL---RVLKMPDGNTT--VIIQGKKRFEINEVISEKPYLTASIKEVS----E 152
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FE 164
+ ++P+F A+ K A+++I + ++ + FV+S
Sbjct: 153 LRPEAKNPEFDAIIDSIKDLALQII---KGSPNIPSEASFAIKNIESPSFLINFVSSNMN 209
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+S E+ +L++ DLK R + ++ Q + + I KV+ +S+ Q+E+ L QQM
Sbjct: 210 LSVAEKQELLETNDLKDRALATLKYMNVEFQKLELKNDIQSKVQSDMSQQQREYFLHQQM 269
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+ I+EELG ED++ ++ + + + KH KEL ++++M PQ Y+ R Y
Sbjct: 270 KTIQEELG-GVSQEDEMEEMKARGKKKKWNETVKKHFNKELSKMQRMNPQVAEYSIQRNY 328
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
L+L DLPW++ S++ DLK A+ LD DHYGL VK+RIIEYLAV KL+ D + P+LC
Sbjct: 329 LDLFLDLPWDEFSKD-KFDLKRAQRILDRDHYGLEDVKERIIEYLAVLKLRNDMKSPILC 387
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
GPPGVGKTSL S+A ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR+I LK+
Sbjct: 388 LYGPPGVGKTSLGKSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKA 447
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G NPV +LDEIDK S +GDP+SALLEVLDPEQN F+D++L + FDLSKV+F+ATAN
Sbjct: 448 GTSNPVFVLDEIDKLASGNQGDPSSALLEVLDPEQNSEFHDNFLEMGFDLSKVMFIATAN 507
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
I P L DRME+I + GYT EEK+ IA +HL+P+ L +HGL E L+I +A ++ +I
Sbjct: 508 TLNSIQPALRDRMEIINVTGYTTEEKIEIAKQHLLPKQLKEHGLTKEHLKIGKAQLEKII 567
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEV 584
+ YTRE+GVR LE+ +A + R AA +A
Sbjct: 568 EGYTRESGVRILEKQIAKMVRYAAKNIA-------------------------------- 595
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
M E+ H +I++ VVD VL PR + R+ E G+ GL W
Sbjct: 596 ------MDEAYH-----IKISNQDVVD------VLKSPRLE-RDKYESNDVAGVVTGLAW 637
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN-- 702
T GG++ F+E+ +GKG L++TG LG V+KESA IAL ++++ A G+N
Sbjct: 638 TQVGGDILFIESILSKGKGTLNITGNLGKVMKESATIALEYIKSNAESF------GINPD 691
Query: 703 LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVG 762
+ ++HIH P GA PKDGPSAGVT++T+L+SLF++++V+ + AMTGE+TLRG VLPVG
Sbjct: 692 IFGNYNVHIHVPEGATPKDGPSAGVTMLTSLISLFTQRKVKKNLAMTGEITLRGKVLPVG 751
Query: 763 GVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
G+K+KILAA R I +IL N +D+ E+ A L+ L M++V++ A
Sbjct: 752 GIKEKILAAKRARITEIILCVENERDIKEIKAEYLSGLTFHYVNDMDEVIKLAL 805
>gi|390455660|ref|ZP_10241188.1| ATP-dependent protease La [Paenibacillus peoriae KCTC 3763]
Length = 778
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 319/765 (41%), Positives = 458/765 (59%), Gaps = 89/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPD--------- 114
P+G T V++EGL R + + + YY L E E V+ + D
Sbjct: 84 PNG--TIRVLVEGLERAEIIQYTDNEEYYEVLAKELH----EAENVQPETDALMRTVLTQ 137
Query: 115 ---FIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQL 171
+I LS++ + +S +E+ GR LAD+ + + +E+
Sbjct: 138 FEHYINLSKKVTPETLAAVSDIEEP----GR------------LADVITSHLTLKIKEKQ 181
Query: 172 VMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL 231
+L+++D+ RL K ++++ + + + KI+Q+V+ Q+ K+QKE+ LR+QM+AI++EL
Sbjct: 182 DILETIDVTQRLEKLLDILNNEREVLELERKISQRVKKQMEKTQKEYYLREQMKAIQKEL 241
Query: 232 GDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADL 291
G+ + ++ L ++ +P + + V+KE+ RL+KM R Y++ + L
Sbjct: 242 GEKEGRAGEVEELRNQLSELELPVPVKEKVEKEIDRLEKMPASSAEGGVIRNYVDWLLSL 301
Query: 292 PWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGV 351
PW +++ DLD+ A+E L+ DHYGL + K+R++EYLAVRKL +GP+LC VGPPGV
Sbjct: 302 PWNTFTDD-DLDIAKAEEVLNDDHYGLDKPKERVLEYLAVRKLVKTIKGPILCLVGPPGV 360
Query: 352 GKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVM 411
GKTSLA SIA ++GR+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV
Sbjct: 361 GKTSLARSIAKSMGREFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGTSNPVF 420
Query: 412 LLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPP 471
LLDEIDK SD RGDP++ALLEVLDPEQN TF+DH++ +PFDLS V+FV TAN A IP
Sbjct: 421 LLDEIDKMASDFRGDPSAALLEVLDPEQNNTFSDHFVELPFDLSNVMFVTTANAAHNIPR 480
Query: 472 PLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREA 531
PL+DRME + +PGYT EKL IA R+L+P+ +HGL E L I E + VI+ YTRE+
Sbjct: 481 PLMDRMETLYIPGYTELEKLEIANRYLLPKQKREHGLEEEQLVIGEDTLMRVIREYTRES 540
Query: 532 GVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPM 591
GVRNLE+ LA+L R AA V G E ++V P
Sbjct: 541 GVRNLEQQLASLCRKAAKSV---------------------------VSGGEGSIQVTPD 573
Query: 592 GESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEV 651
L+ LG +F AE G+ GL WT GGE
Sbjct: 574 N----------------------LKDYLGIAKF-RYGVAELEDQIGMVTGLAWTEVGGET 610
Query: 652 QFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHI 711
+E T + G G+L LTG+LGDV+KESAQ A ++ R++AT+L + + + DIHI
Sbjct: 611 LMIEVTVVPGAGKLILTGKLGDVMKESAQAAFSYTRSKATELGIEP----DFYEKNDIHI 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA+PKDGPSAG+T+ TAL+S + + V D AMTGE+TLRG VLP+GG+K+K LAA
Sbjct: 667 HIPEGAIPKDGPSAGITIATALISALTNRHVSKDVAMTGEITLRGRVLPIGGLKEKSLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
HR G K+++LP+ N +DL ++P ++ +E + M+ VL+ A
Sbjct: 727 HRAGYKKILLPKDNERDLKDIPDSIRQDVEFVPVAHMDQVLKHAL 771
>gi|244539152|dbj|BAH83195.1| DNA-binding ATP-dependent protease La [Candidatus Ishikawaella
capsulata Mpkobe]
Length = 793
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 325/757 (42%), Positives = 458/757 (60%), Gaps = 70/757 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE---MEQVEQDPDFIALSR 120
P G V V++EGL R + LS G Y+ A+I + ++ E + EQ+ A
Sbjct: 98 PDGTVK--VLVEGLQRAHITNLSDNGEYFVAQIEYMIISNTEGSKKQDREQEILICAALS 155
Query: 121 QFKATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFEISFEEQLVMLDSVDL 179
QF+ ++ QK L + +LAD A + ++ +L+ D+
Sbjct: 156 QFEG-------YIKLNQKIPPEVLTSLNNIDDAARLADTVAAHMPLKLVDKQSILEMFDV 208
Query: 180 KVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDED 239
RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++EL + D+ D
Sbjct: 209 NERLQYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELSEIDESFD 268
Query: 240 DLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEE 299
+ L+RK+ MP ++K V+ EL++++ M P T R Y++ I +PW S+
Sbjct: 269 EYEVLKRKINKTKMPKEVFKKVEAELQKMRMMSPMSAEATVIRNYIDWIVQIPWSVRSK- 327
Query: 300 IDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASS 359
+ DL A+ LD DHYGL +VK RI+EYLAV+ RG ++C VGPPGVGKTSL S
Sbjct: 328 VKKDLNKAQYGLDKDHYGLKKVKDRILEYLAVQTRLNKIRGAIICLVGPPGVGKTSLGQS 387
Query: 360 IASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKT 419
IA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDEIDK
Sbjct: 388 IAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVTNPLFLLDEIDKM 447
Query: 420 GSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEV 479
D+RGDPASALLEVLDPEQN +FNDHYL + +DLS V+FVAT+N + IPPPLLDRMEV
Sbjct: 448 SHDMRGDPASALLEVLDPEQNSSFNDHYLELDYDLSDVMFVATSN-SMNIPPPLLDRMEV 506
Query: 480 IELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI-PEAMVKLVIQRYTREAGVRNLER 538
I+L GYT +EKL IA +HLIP+ + ++ L E + I P+A++ +I+ YTREAGVRNLER
Sbjct: 507 IKLSGYTEDEKLNIAKQHLIPKQIHRNALKEEEITIEPDAIID-IIRYYTREAGVRNLER 565
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
++ + R K V L LLD
Sbjct: 566 EISKICR------------------KTVKML---LLD----------------------- 581
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
+ T + ++ L+K LG +D A G GL WT GG++ +EAT
Sbjct: 582 ----KTTKHMTINSENLKKFLGIKLYDYGRANNENRV-GQVTGLAWTEVGGDLLTIEATC 636
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ G G+ + TG LG+V++ES Q ALT VRARA DL + + N + +DIHIH P GA
Sbjct: 637 IPGNGKFNYTGSLGEVMQESIQAALTVVRARANDLGIDS----NFHETQDIHIHVPEGAT 692
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+ + TALVS + V++D AMTGE+TLRG +L +GG+K+K+LAAHR GIK
Sbjct: 693 PKDGPSAGIAMCTALVSCLTGNTVKSDVAMTGEITLRGHILSIGGLKEKLLAAHRGGIKT 752
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
VI+P N++DL E+P ++A+L I K +E+VL+ A
Sbjct: 753 VIIPHENIRDLEEIPKNIIANLTIYPVKLIEEVLKLA 789
>gi|333370330|ref|ZP_08462341.1| ATP-dependent protease LonB [Desmospora sp. 8437]
gi|332978062|gb|EGK14800.1| ATP-dependent protease LonB [Desmospora sp. 8437]
Length = 778
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 313/761 (41%), Positives = 463/761 (60%), Gaps = 81/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSL---EMTKIEMEQV-----EQDPDF 115
P+G T V++EGL R + E ++Y R+ + E+ I +E + + +
Sbjct: 83 PNG--TIRVLVEGLSRARLLEFLETESHYRVRVREIIQEEVHDINVEALMRSVLDHFEQY 140
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ LS++ + +S +++ GR LAD+ + + E++ +L+
Sbjct: 141 LRLSKKMSPETLSGVSDIDEP----GR------------LADVVASHLPLKMEDKQQILE 184
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+V+++ RL +++ + + + KI+Q+V+ Q+ K+QKE+ LR+QM+AI+ ELG+ +
Sbjct: 185 TVEIRERLETLLSMLNNEREVLELERKISQRVKKQMEKTQKEYYLREQMKAIQRELGEKE 244
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
++ L ++ P+++ + ++KEL+RL+K+ R Y+E + +LPW K
Sbjct: 245 GRLGEVEELREQLAQLEAPADVKERIEKELQRLEKIPTSSAEGGVIRTYVEWLLELPWLK 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+E+ DL+LK A+ L+ DHYGL + K+R++EYLAV+K+ +GP+LC VGPPGVGKTS
Sbjct: 305 QTED-DLNLKKAERILEEDHYGLEKAKERVLEYLAVQKMVQQLKGPILCLVGPPGVGKTS 363
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA ALGR+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV LLDE
Sbjct: 364 LGRSIARALGRQFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGIKNAGTSNPVFLLDE 423
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK D RGDPASALLEVLDPEQNKTF+DHY+ +P+DLSKV+F+ TAN IP PLLD
Sbjct: 424 IDKMTMDFRGDPASALLEVLDPEQNKTFSDHYIEMPYDLSKVMFITTANTLHTIPQPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME + + GYT EK +IA +LIP+ + +HGL E QI + ++ VI+ YTREAGVRN
Sbjct: 484 RMETLYISGYTEIEKEQIAKEYLIPKQIKEHGLTKENFQIHKEAIRNVIRYYTREAGVRN 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER LAR ++ ++++ + ++K+
Sbjct: 544 LERTFGKLARKGVKQLVSGDRKRVVVTAKN------------------------------ 573
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
L K LGP +F AE G + GL WT GG+ +E
Sbjct: 574 -------------------LSKYLGPEKF-RYGKAEETNPTGAATGLAWTAAGGDTLTIE 613
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ + GKG+L LTG+LGDV+KESAQ A +++R+RA + ++ E + DIHIH P
Sbjct: 614 VSVLPGKGKLTLTGKLGDVMKESAQAAFSYIRSRAEEWKIDPE----FNEKNDIHIHVPE 669
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA+PKDGPSAG+T+ TALVS + V + MTGE+TLRG VLP+GG+K+K LAAHR G
Sbjct: 670 GAIPKDGPSAGITMATALVSALTGVPVSREVGMTGEITLRGRVLPIGGLKEKSLAAHRAG 729
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+ R+++P+ N KDL E+P +V L+I M++VL+ A
Sbjct: 730 LTRILIPKENEKDLDEIPKSVSKELKITPVSHMDEVLKLAL 770
>gi|386628028|ref|YP_006147748.1| DNA-binding ATP-dependent protease La [Escherichia coli str. 'clone
D i2']
gi|386632948|ref|YP_006152667.1| DNA-binding ATP-dependent protease La [Escherichia coli str. 'clone
D i14']
gi|355418927|gb|AER83124.1| DNA-binding ATP-dependent protease La [Escherichia coli str. 'clone
D i2']
gi|355423847|gb|AER88043.1| DNA-binding ATP-dependent protease La [Escherichia coli str. 'clone
D i14']
Length = 799
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 463/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 99 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 156
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 157 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 201 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 261 DAPDENEALKRKIDAAKMPKEVKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 319
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 320 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 379
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 380 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 439
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 440 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 498
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 499 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 558
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 559 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 590
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 591 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 627
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 628 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 681
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 682 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 741
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 742 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 788
>gi|144225717|emb|CAM84203.1| Lon ATP-dependent protease [Pseudomonas putida]
Length = 798
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 333/774 (43%), Positives = 467/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ + + A +S ++
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFTEVEGHIRAEVSLID-------- 114
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
+ A R+ + L+S EQ + G + +VL I +L D A
Sbjct: 115 -----EVDAAERESEVFVRTLLSQFEQYVQLGKKVPAEVLSSLNSIEEPGRLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQEILEIVDLTTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALTKAQAELNKLKQMSPMSAEATVVRS 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +PW KA ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RGPVL
Sbjct: 290 YLDWLVQVPW-KAQSKVRLDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTS 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IPP LLDRMEVI LPGYT +EK+ IA+++L+P+ + +GL E L+I + ++ +
Sbjct: 469 N-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKEELEIDVSAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR LER +A + R + Q+Q + SS+
Sbjct: 528 IRYYTREAGVRGLERQIAKVCRKVVKEHTGQKQVKVKVSSE------------------- 568
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
LE +LG +F AE+ G GL
Sbjct: 569 ------------------------------QLEHLLGVRKF-RYGLAEQQDQIGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A +
Sbjct: 598 WTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|291616551|ref|YP_003519293.1| Lon [Pantoea ananatis LMG 20103]
gi|378768260|ref|YP_005196731.1| DNA-binding ATP-dependent protease La [Pantoea ananatis LMG 5342]
gi|386014924|ref|YP_005933201.1| ATP-dependent protease Lon [Pantoea ananatis AJ13355]
gi|386080395|ref|YP_005993920.1| ATP-dependent protease Lon [Pantoea ananatis PA13]
gi|291151581|gb|ADD76165.1| Lon [Pantoea ananatis LMG 20103]
gi|327392983|dbj|BAK10405.1| ATP-dependent protease Lon [Pantoea ananatis AJ13355]
gi|354989576|gb|AER33700.1| ATP-dependent protease Lon [Pantoea ananatis PA13]
gi|365187744|emb|CCF10694.1| DNA-binding ATP-dependent protease La [Pantoea ananatis LMG 5342]
Length = 784
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 325/771 (42%), Positives = 464/771 (60%), Gaps = 90/771 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R ++ L+ G ++ A+ L +IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRANITTLADNGDHFVAQAEYLVSPEIEEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNNIDDAAR----------------LADTVAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DTPDEYEALKRKIDAAKMPQEAREKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRKAQETLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKAAEISVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A + + L+D
Sbjct: 544 LERELSKLCRKA---------------------VKTLLMD-------------------- 562
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
+ + ++ L+ LG RFD ++ RV G GL WT GG++
Sbjct: 563 -------KTKKHITINGENLKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VR++ AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRSNVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
HR GIK V++P+ N +DL E+P V+A LEI KR+E+VL A E P+
Sbjct: 727 HRGGIKVVLIPDENKRDLEEIPQNVIADLEIHPVKRIEEVLNLALE-NAPY 776
>gi|423196865|ref|ZP_17183448.1| lon protease [Aeromonas hydrophila SSU]
gi|404631615|gb|EKB28246.1| lon protease [Aeromonas hydrophila SSU]
Length = 784
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 309/664 (46%), Positives = 428/664 (64%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + E++ +L+ + R+ +++ + ++V ++I +V+ Q+ K
Sbjct: 164 RLADTMAAHMPLKLEDKQKVLEIASVSERIEFLMAMMESEIDLLQVEKRIRSRVKKQMEK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELG+ +D D+ AL RK++ AGMP + + Q EL +LK M P
Sbjct: 224 SQREYYLNEQMKAIQKELGELEDSPDEFEALNRKIEEAGMPEDAREKAQAELAKLKMMSP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + +PW KA ++ DL A+E LD+DHYGL +VK RI+EYLAV+
Sbjct: 284 MSAEATVVRSYVDWMVQVPW-KARSKVKKDLGKAQEVLDADHYGLEKVKDRILEYLAVQA 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 343 RVNKLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSM 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG+LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN +FNDHYL V +D
Sbjct: 403 PGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNNSFNDHYLEVDYD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + + ++GL +
Sbjct: 463 LSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLVSKQIQRNGLKESEI 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
I ++ + VI+ YTREAGVR+LER ++ + R A ++ L
Sbjct: 522 TIEDSALVGVIRYYTREAGVRSLEREISKICRKAVKRI---------------------L 560
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LD + + V++A L++ LG RFD +A ++
Sbjct: 561 LDKSIKH---------------------------VQVNQANLKEFLGVQRFDYGKATDQN 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG++ +E T M GKG+L TG LGDV++ES Q A+T VRARA L
Sbjct: 594 QV-GQVCGLAWTEVGGDLLTIETTNMPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEKL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
++ A + + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+T
Sbjct: 653 RINA----DFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVRADVAMTGEIT 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAAHR GIKRV++P+ N +DL E+P V LEI + +++VLE
Sbjct: 709 LRGEVLPIGGLKEKLLAAHRGGIKRVLIPKENERDLEEIPDNVKQDLEIHPVRWIDEVLE 768
Query: 814 QAFE 817
A +
Sbjct: 769 LALQ 772
>gi|374850900|dbj|BAL53876.1| ATP-dependent Lon protease [uncultured Acidobacteria bacterium]
Length = 787
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 322/758 (42%), Positives = 454/758 (59%), Gaps = 91/758 (12%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T V+++GL R + + Y AR++ L + + +VE AL R
Sbjct: 87 TLQVLMQGLERVVILRMEQTAPYMRARVNPLPLLEENAVEVE------ALHR-------- 132
Query: 129 LISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLS---- 184
++L+Q K LL VP A + L + ++DL S
Sbjct: 133 --AILDQVSKALS----LLPQVPEELHAAFAQTDDPVRLAYLLATILNLDLPALQSLLEA 186
Query: 185 ----KATELVDRHL----QSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
L+ RHL Q + + KI + + ++++ Q+E+ LRQQ+RAI+ ELG+ D
Sbjct: 187 RTKDDLLRLLFRHLTHEVQVLELRHKIASQAQQEMTREQREYFLRQQLRAIQRELGEIDP 246
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+ ++ L +++ A +P + K ++EL RL+K+ P Y R YLEL+ +LPW +
Sbjct: 247 HQAEVNLLRERLEQAELPEFVRKEAERELNRLEKLPSMAPDYHVIRTYLELVLELPWNRQ 306
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
+E+ +LDL + LD DHYGL VK+RI+E+LAV KL P+A+ P+LCFVGPPGVGKTSL
Sbjct: 307 TED-NLDLANVRRVLDEDHYGLEDVKRRILEHLAVLKLNPEAKAPILCFVGPPGVGKTSL 365
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
SIA ALGRKF R+SLGG+ DEA++RGHRRTYIG+MPGR+I ++R GV NP+++LDE+
Sbjct: 366 GQSIARALGRKFERLSLGGLHDEAELRGHRRTYIGAMPGRIIQAIRRAGVKNPLLMLDEV 425
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK G D RGDPA+ALLE+LDPEQN F D+YL++PFDLSKV F+ TAN IP PLLDR
Sbjct: 426 DKIGRDFRGDPAAALLEILDPEQNHAFRDNYLDLPFDLSKVFFITTANTLDTIPRPLLDR 485
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEV+ LPGY+ EEK+ IA RHL+P+ L + G+ +E LQ+P+ ++ +I RYTREAGVR L
Sbjct: 486 MEVLRLPGYSEEEKVEIARRHLVPKKLKETGITAEQLQLPDETLRYIIARYTREAGVRQL 545
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER +A +AR A+++AE E
Sbjct: 546 ERAIAQIARKIALRIAEGHTES-------------------------------------- 567
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
+ V A L +LGP RF EA + + G++ G+ WT GGEV ++EA
Sbjct: 568 -----------ITVRPADLPDLLGPERFFPEEARKELPV-GVATGVAWTETGGEVLYIEA 615
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHFP 714
+ G L LTGQLG++++ESA+ A +++ + A G+N + + +HIH P
Sbjct: 616 ALLPGGKGLTLTGQLGEIMQESAKAAESYIWSHAEAF------GINRDVFEKNGVHIHVP 669
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
AGA+PKDGPSAG+ +VTAL SL++ VR D AMTGE+TL GL+LPVGG+K+K+LAA R
Sbjct: 670 AGAIPKDGPSAGIAMVTALASLYTGIPVRNDVAMTGEITLSGLILPVGGIKEKVLAARRA 729
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
GI+R+ILP N KDL E+P V +E I +R+ED +
Sbjct: 730 GIRRIILPRPNEKDLRELPEHVRDEMEFIFVERIEDAI 767
>gi|85716435|ref|ZP_01047407.1| peptidase S16, ATP-dependent protease La [Nitrobacter sp. Nb-311A]
gi|85696792|gb|EAQ34678.1| peptidase S16, ATP-dependent protease La [Nitrobacter sp. Nb-311A]
Length = 809
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 334/810 (41%), Positives = 469/810 (57%), Gaps = 89/810 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + I+ G A L L ++ P G V V++EGL R V+ S R
Sbjct: 61 TQKNASDDDPAPDSIY--KIGTLASVLQL---LKLPDGTVK--VLVEGLERARVETYSDR 113
Query: 89 GTYYTARISSL---EMTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRT 143
YY A +L + +E E + + DF + + K + E++ V++
Sbjct: 114 SDYYEATAVALADTDTNSVEAEALARSVVSDFESYVKLNKKISPEVVGVVQA-------- 165
Query: 144 KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
KL D + ++ +L+++ + RL K L++ + ++V ++I
Sbjct: 166 -----ITDFAKLGDTVASHLAAKIADRQSILETLSVTARLEKVLGLMESEISVLQVEKRI 220
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
+V+ Q+ K+Q+E+ L +QM+AI++ELGD D+ D+L LE K+ + + Q
Sbjct: 221 RSRVKRQMEKTQREYYLNEQMKAIQKELGD-DEGRDELADLEEKIAKTKLSKEAREKAQH 279
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL++L++M P T R YL+ + +PW K S+ + DL AA+E LD+DHYGL +VK
Sbjct: 280 ELKKLRQMSPMSAEATVVRNYLDWLLSIPWAKKSK-VKKDLNAAQEVLDADHYGLEKVKD 338
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
RI+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IR
Sbjct: 339 RIVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIARATGREFVRVSLGGVRDEAEIR 398
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TF
Sbjct: 399 GHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNSTF 458
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
NDHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP L
Sbjct: 459 NDHYLEVDYDLSNVMFLTTANTLN-IPGPLMDRMEIIRIAGYTENEKVEIARKHLIPNAL 517
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+HGL S+ I + + L+I+RYTREAGVRNLER L+ LAR A +E L
Sbjct: 518 SKHGLDSKEWSIDDEALLLIIRRYTREAGVRNLERELSTLARKAV-------KELMLSKK 570
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP- 622
K V V E ++E LG P
Sbjct: 571 KSVQ------------------------------------------VTEKVVEDFLGVPK 588
Query: 623 -RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
RF + E +++ G+ GL WT+ GGE+ +E+ M GKG + +TG L DV+KES
Sbjct: 589 YRFGEIETDDQI---GVVTGLAWTDVGGELLTIESVMMPGKGRMTVTGNLRDVMKESISA 645
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA + L + RDIH+H P GA PKDGPSAGV + T +VS+ +
Sbjct: 646 AASYVRSRAITFGIEPP----LFERRDIHVHVPEGATPKDGPSAGVAMATTIVSVLTGIP 701
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
+R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++P+ N KDL E+ ++ LE
Sbjct: 702 IRRDIAMTGEITLRGRVLPIGGLKEKLLAASRGGIKTVLIPDENAKDLTEISESIKGGLE 761
Query: 802 IILAKRMEDVLEQAF---EGGCPWRQHSKL 828
II RM++V+ +A W + +KL
Sbjct: 762 IIPVARMDEVIAKALVRQPKPIVWEEDTKL 791
>gi|337286233|ref|YP_004625706.1| ATP-dependent protease La [Thermodesulfatator indicus DSM 15286]
gi|335359061|gb|AEH44742.1| ATP-dependent protease La [Thermodesulfatator indicus DSM 15286]
Length = 804
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 299/664 (45%), Positives = 429/664 (64%), Gaps = 53/664 (7%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + ++ +L+ ++K RL + ++ IR+ ++I ++V+ Q+ K
Sbjct: 165 RLADHIAAVLNLKLAQKQRLLEITNVKKRLEMVLGYLRGEMEVIRLEQRIKERVKKQMEK 224
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+Q+++ L +QMRAI++E+G+ +D DL LE++++ +P + V++E ++L+ M P
Sbjct: 225 TQRDYYLNEQMRAIQKEMGEREDGRGDLAELEKRIKRKRLPKEVAAKVRQEFKKLQMMSP 284
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + LPW + +++ +D++ A++ LD+DHYGL + KQRI+E+LAV+K
Sbjct: 285 MSAEATVVRNYIDWLISLPWYERTKD-KIDIEEAEKILDADHYGLEKPKQRILEHLAVQK 343
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LC VGPPGVGKTSLA S+A A+GR F+RISLGGV+DEA+IRGHRRTYIG++
Sbjct: 344 LVKKIKGPILCLVGPPGVGKTSLAKSVARAMGRNFVRISLGGVRDEAEIRGHRRTYIGAL 403
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG++I G+K+ G NPV LDE+DK G+D RGDPA+ALLEVLDPEQN F DHYL V +D
Sbjct: 404 PGKIIQGMKKAGTVNPVFCLDEVDKIGTDFRGDPAAALLEVLDPEQNFAFQDHYLEVGYD 463
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+F+ TAN IP PLLDRME+IE+PGYT EEKL IA +LIPR L+ HGL E +
Sbjct: 464 LSNVLFITTANALHTIPTPLLDRMEIIEIPGYTEEEKLEIAKGYLIPRQLEAHGLSPEMV 523
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ + +I+RYT+EAGVRNLER +AA+ R A +VA+
Sbjct: 524 TFSDRAILEIIRRYTKEAGVRNLEREIAAICRKIAKEVAKD------------------- 564
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
F+ T LV + + K LG PR+ A E+
Sbjct: 565 -------------------------PKAFKPTKVLV---SKVHKYLGVPRYRYGMAEEKN 596
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G++ GL WT GG + +EA M GKG+L +TG+LGDV++ES Q A+++VR+RA L
Sbjct: 597 EV-GMATGLAWTETGGALLQIEAVIMPGKGKLLITGKLGDVMQESVQAAMSYVRSRAHQL 655
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
L + Q DIH+H P GA+PKDGPSAG+T+ TA+VS + V+ AMTGE+T
Sbjct: 656 GLPP----DFYQRIDIHVHVPEGAIPKDGPSAGITIATAIVSALLKIPVKRTVAMTGEIT 711
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAA R I+ VI+P+ N KDL E+PA V L+I+L + M+DVL+
Sbjct: 712 LRGRVLPIGGLKEKLLAARRGHIETVIIPQENEKDLKEIPAKVRKDLDIVLVEHMDDVLK 771
Query: 814 QAFE 817
A +
Sbjct: 772 IALD 775
>gi|289668774|ref|ZP_06489849.1| ATP-dependent serine proteinase La [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 823
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 335/777 (43%), Positives = 480/777 (61%), Gaps = 63/777 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 69 YTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGQGTEVEASD-- 121
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 122 ----AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL+
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V+FV
Sbjct: 411 LNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNTSFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ + +GL E ++I +
Sbjct: 471 ATSN-SLSIPGPLLDRMEVIRIPGYTEDEKLNIAMRYLVPKQIKANGLKPEEIEIGSDAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 530 QDIVRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
P + V+ + + + V+ L+K LG RFD A E G+
Sbjct: 565 ---------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-GLVT 614
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 615 GLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----D 670
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ +RAD AMTGE+TLRG V
Sbjct: 671 VDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSVLAKVPIRADVAMTGEITLRGRVSA 730
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI+ V++P+ N KDL ++PA V L+I+ K +++VL+ A E
Sbjct: 731 IGGLKEKLLAALRGGIRTVLIPDENRKDLADIPANVTRDLKIVPVKWIDEVLDLALE 787
>gi|389774767|ref|ZP_10192886.1| ATP-dependent serine proteinase La [Rhodanobacter spathiphylli B39]
gi|388438366|gb|EIL95121.1| ATP-dependent serine proteinase La [Rhodanobacter spathiphylli B39]
Length = 823
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 336/784 (42%), Positives = 475/784 (60%), Gaps = 62/784 (7%)
Query: 41 EVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE 100
E+ H G A L L ++ P G V V++EG R SV++ R TAR +E
Sbjct: 67 EISDLHQIGTLAGVLQL---LKLPDGTVK--VLVEGQSRVSVEDFRERDGMLTARSRVIE 121
Query: 101 MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQ--KQKTGGRTKVLLETVPIH---KL 155
P + A R+ + LIS+ EQ KQ +VL + ++
Sbjct: 122 ------------PVYNAKERELDVVSRTLISLFEQLVKQSRKLPPEVLASLSGVEDPSRV 169
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
AD A + ++ +L++ D+ RL LVD + +V ++I +V+ Q+ KSQ
Sbjct: 170 ADSIAAHLSVRMADKQKVLETADVGQRLELLIGLVDGEMDLQQVEKRIRGRVKSQMEKSQ 229
Query: 216 KEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQ 275
+E+ L +QM+AI++ELGD++D +++ L++K++ +GMP + ++E +LK+M P
Sbjct: 230 REYYLNEQMKAIQKELGDSEDGPNEVEELQKKIEGSGMPKPVLAKARQEFSKLKQMSPMS 289
Query: 276 PGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK 335
T R YL+ + +PW+K S+ + DL+ A+E LD+DH+GL +VK+RI+EYLAV++
Sbjct: 290 AEATVVRNYLDWLVGVPWKKRSK-VRKDLQLAQEVLDADHFGLEKVKERILEYLAVQQRV 348
Query: 336 PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPG 395
+GP+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTYIGSMPG
Sbjct: 349 SVMKGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYIGSMPG 408
Query: 396 RLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 455
R++ + +VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS
Sbjct: 409 RIVQNINKVGAKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNHAFNDHYLEVDLDLS 468
Query: 456 KVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI 515
+V+++ATAN IP PLLDRMEVI +PGYT +EKL IA ++L+ + L +GL E L +
Sbjct: 469 EVMWIATANSLN-IPGPLLDRMEVIRIPGYTEDEKLGIAQKYLLAKQLKANGLKPEELSV 527
Query: 516 PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLD 575
E ++ +++ YTRE+GVRNLER ++ + R ++ L
Sbjct: 528 TEEALRDIVRYYTRESGVRNLEREVSKICRKVVKELT--------------------LGQ 567
Query: 576 NRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERV 633
R A G + ++TS A L+ LG RFD +E V
Sbjct: 568 VRKAKGKPAAKTAK---GKAKAAPDKVKVTS------ANLDHYLGVRRFDFGRKELQNEV 618
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL WT GGE+ +EA+ + GKG L TGQLGDV+KES Q AL+ VRARA L
Sbjct: 619 ---GLVTGLAWTQVGGELLSIEASVVAGKGRLVHTGQLGDVMKESIQAALSVVRARADQL 675
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ E Q D+HIH P GA PKDGPSAG+ + TALVS+ +R VR++ AMTGE+T
Sbjct: 676 GIDPE----FHQKLDVHIHVPEGATPKDGPSAGIAMCTALVSVLTRVPVRSEVAMTGEIT 731
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAAHR GI VI+PE N KDL ++PA + +S++I + +++VL+
Sbjct: 732 LRGRVLPIGGLKEKLLAAHRGGITTVIIPEDNKKDLADMPANITSSMQIHPVRWIDEVLD 791
Query: 814 QAFE 817
A E
Sbjct: 792 IALE 795
>gi|75676088|ref|YP_318509.1| peptidase S16, ATP-dependent protease La [Nitrobacter winogradskyi
Nb-255]
gi|74420958|gb|ABA05157.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Nitrobacter winogradskyi Nb-255]
Length = 808
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 336/810 (41%), Positives = 469/810 (57%), Gaps = 89/810 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + I+ G A L L ++ P G V V++EGL R V+ S R
Sbjct: 61 TQKNASDDDPAPDSIY--KIGTLASVLQL---LKLPDGTVK--VLVEGLERARVEAYSDR 113
Query: 89 GTYYTARISSL---EMTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRT 143
YY A +L + +E E + + DF + + K + E++ V++
Sbjct: 114 TDYYEATAVALADTDTNSVEAEALSRSVVSDFESYVKLNKKISPEVVGVVQA-------- 165
Query: 144 KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
KL D + ++ +L+++ + RL K L++ + ++V ++I
Sbjct: 166 -----ITDFAKLGDTVASHLAAKIADRQGILETLSVTARLEKVLGLMESEISVLQVEKRI 220
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
+V+ Q+ K+Q+E+ L +QM+AI++ELGD D+ D+L LE K+ + + Q
Sbjct: 221 RSRVKRQMEKTQREYYLNEQMKAIQKELGD-DEGRDELADLEEKIAKTKLSKEAREKAQH 279
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL++L++M P T R YL+ + +PW K S+ + DL AA+E LD+DHYGL +VK
Sbjct: 280 ELKKLRQMSPMSAEATVVRNYLDWLLSIPWAKKSK-VKKDLNAAQEVLDADHYGLEKVKD 338
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
RI+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IR
Sbjct: 339 RIVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIARATGREFVRVSLGGVRDEAEIR 398
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TF
Sbjct: 399 GHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNSTF 458
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
NDHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP L
Sbjct: 459 NDHYLEVDYDLSNVMFLTTANTLN-IPGPLMDRMEIIRIAGYTENEKVEIARKHLIPNAL 517
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+HGL S+ I + + L+I+RYTREAGVRNLER L+ LAR A +E L
Sbjct: 518 SKHGLDSKEWSINDEALLLIIRRYTREAGVRNLERELSTLARKAV-------KELMLSKK 570
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP- 622
K V V E ++E LG P
Sbjct: 571 KSVE------------------------------------------VTEKVVEDFLGVPK 588
Query: 623 -RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
RF + E ++V G+ GL WT+ GGE+ +E+ M GKG + +TG L DV+KES
Sbjct: 589 YRFGEIETDDQV---GVVTGLAWTDVGGELLTIESVMMPGKGRMTVTGNLRDVMKESISA 645
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA + L + RDIH+H P GA PKDGPSAGV + T +VS+ +
Sbjct: 646 AASYVRSRAITFGIEPP----LFERRDIHVHVPEGATPKDGPSAGVAMATTIVSVLTGIP 701
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
+R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++P+ N KDL E+ A+ LE
Sbjct: 702 IRRDIAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPDENAKDLTEISEAIKGGLE 761
Query: 802 IILAKRMEDVLEQAF---EGGCPWRQHSKL 828
II RM++V+ +A W + +KL
Sbjct: 762 IIPVARMDEVIAKALVRQPKPIVWEEDTKL 791
>gi|440731337|ref|ZP_20911362.1| ATP-dependent serine proteinase La [Xanthomonas translucens
DAR61454]
gi|440373299|gb|ELQ10058.1| ATP-dependent serine proteinase La [Xanthomonas translucens
DAR61454]
Length = 824
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 339/777 (43%), Positives = 472/777 (60%), Gaps = 58/777 (7%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A+ L L ++ P G T V++EGL R SV+ ++ R S ++ +
Sbjct: 69 YNVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVSVENVAERDGALQGEGSEIDAAESR 123
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
E R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 124 EE------------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L++ ++ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLETREVGERLEMLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K S+ + DLK A+E LD+DHYGL +VK RI+EYLAV+ RG
Sbjct: 292 VRNYLDWLLGVPWKKRSK-VRKDLKVAQETLDADHYGLEKVKDRILEYLAVQSRVKQMRG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +V NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V+FV
Sbjct: 411 LNKVSSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ L +GL + L+I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLAIAMRYLVPKQLKANGLKGDELEIAADAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A L P
Sbjct: 530 RDIVRYYTRESGVRNLEREVAKICRKVVKEIA----------------LSGPQPAAAKKA 573
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
A+ V + R++ V L+K LG RFD A E+ G+
Sbjct: 574 PAKKGAAV---------RKDKARVS----VGSRNLDKYLGVRRFDFGRAEEQNEV-GLVT 619
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +E+T + GKG + LTGQLGDV+KESA AL+ VR+RA L +
Sbjct: 620 GLAWTEVGGDLLQIESTLVPGKGAVILTGQLGDVMKESASAALSVVRSRAERLGI----E 675
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ V AD AMTGE+TLRG V
Sbjct: 676 VDFLQKHDVHLHVPDGATPKDGPSAGIAMVTSLVSMLTKVPVNADVAMTGEITLRGRVSA 735
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI VI+PE N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 736 IGGLKEKLLAALRGGIHTVIIPEENRKDLADIPDNVTRDLKIVPVKWIDEVLDLALE 792
>gi|170720929|ref|YP_001748617.1| ATP-dependent protease La [Pseudomonas putida W619]
gi|169758932|gb|ACA72248.1| ATP-dependent protease La [Pseudomonas putida W619]
Length = 798
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 332/774 (42%), Positives = 466/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ + + A +S ++ T
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFTEVEGHIRAEVSLIDETD----- 117
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
A R+ + L+S EQ + G + +VL I +L D A
Sbjct: 118 --------AAERESEVFVRTLLSQFEQYVQLGKKVPAEVLSSLNSIEEPGRLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ VDL R+ ++D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQEILEIVDLSTRVEHVLAMLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALTKAQAELNKLKQMSPMSAEATVVRT 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +PW KA ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RGPVL
Sbjct: 290 YLDWLVQVPW-KAQSKVRLDLSKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTS 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL E L+I + ++ +
Sbjct: 469 N-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLTPKQVKANGLKKEELEIDTSAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR LER +A + R
Sbjct: 528 IRYYTREAGVRGLERQIAKVCRKV------------------------------------ 551
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
+ E T + ++TS LE +LG +F AE+ G GL
Sbjct: 552 -------VKEHTGQKQVKVKVTS------EQLEHLLGVRKF-RYGLAEQQDQIGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +E+ + GKG+L TG LGDV+ ES A T VR+RA L + A +
Sbjct: 598 WTQVGGELLTIESVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|156935008|ref|YP_001438924.1| DNA-binding ATP-dependent protease La [Cronobacter sakazakii ATCC
BAA-894]
gi|389841944|ref|YP_006344028.1| DNA-binding ATP-dependent protease La [Cronobacter sakazakii ES15]
gi|417791993|ref|ZP_12439405.1| DNA-binding ATP-dependent protease La [Cronobacter sakazakii E899]
gi|424798415|ref|ZP_18223957.1| ATP-dependent protease La Type I [Cronobacter sakazakii 696]
gi|429107669|ref|ZP_19169538.1| ATP-dependent protease La Type I [Cronobacter malonaticus 681]
gi|429109247|ref|ZP_19171017.1| ATP-dependent protease La Type I [Cronobacter malonaticus 507]
gi|429114395|ref|ZP_19175313.1| ATP-dependent protease La Type I [Cronobacter sakazakii 701]
gi|429122485|ref|ZP_19183062.1| ATP-dependent protease La Type I [Cronobacter sakazakii 680]
gi|449309234|ref|YP_007441590.1| DNA-binding ATP-dependent protease La [Cronobacter sakazakii SP291]
gi|156533262|gb|ABU78088.1| hypothetical protein ESA_02859 [Cronobacter sakazakii ATCC BAA-894]
gi|333953881|gb|EGL71771.1| DNA-binding ATP-dependent protease La [Cronobacter sakazakii E899]
gi|387852420|gb|AFK00518.1| DNA-binding ATP-dependent protease La [Cronobacter sakazakii ES15]
gi|423234136|emb|CCK05827.1| ATP-dependent protease La Type I [Cronobacter sakazakii 696]
gi|426294392|emb|CCJ95651.1| ATP-dependent protease La Type I [Cronobacter malonaticus 681]
gi|426310404|emb|CCJ97130.1| ATP-dependent protease La Type I [Cronobacter malonaticus 507]
gi|426317524|emb|CCK01426.1| ATP-dependent protease La Type I [Cronobacter sakazakii 701]
gi|426322953|emb|CCK13799.1| ATP-dependent protease La Type I [Cronobacter sakazakii 680]
gi|449099267|gb|AGE87301.1| DNA-binding ATP-dependent protease La [Cronobacter sakazakii SP291]
Length = 784
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 332/769 (43%), Positives = 466/769 (60%), Gaps = 86/769 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGDHFAAKAEYLESPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLSDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDINERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKENEINVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ GE+
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLK-----RIEIT--GEN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
L+ LG RFD ++ RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + + + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINS----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A + P+
Sbjct: 729 GGIKTVLIPDENKRDLEEIPENVIADLDIHPVKRIEEVLTLALQ-NAPY 776
>gi|423206428|ref|ZP_17192984.1| lon protease [Aeromonas veronii AMC34]
gi|404621980|gb|EKB18845.1| lon protease [Aeromonas veronii AMC34]
Length = 784
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 308/664 (46%), Positives = 428/664 (64%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + E++ +L+ V + R+ +++ + ++V ++I +V+ Q+ K
Sbjct: 164 RLADTMAAHMPLKLEDKQKVLEIVSVSERIEFLMAMMESEIDLLQVEKRIRTRVKKQMEK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELG+ +D D+ AL RK++ AGMP + + Q EL +LK M P
Sbjct: 224 SQREYYLNEQMKAIQKELGELEDSPDEFEALNRKIEEAGMPEDAREKAQAELAKLKMMSP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + +PW KA ++ DL A+E LD+DHYGL +VK RI+EYLAV+
Sbjct: 284 MSAEATVVRSYVDWMVQVPW-KARSKVKKDLGKAQEVLDADHYGLEKVKDRILEYLAVQA 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 343 RVNKLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSM 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG+LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN +FNDHYL V +D
Sbjct: 403 PGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNNSFNDHYLEVDYD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + + ++GL +
Sbjct: 463 LSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLVAKQIQRNGLKESEI 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
I ++ + VI+ YTREAGVR+LER ++ + R A ++ L
Sbjct: 522 TIEDSALVGVIRYYTREAGVRSLEREISKICRKAVKRI---------------------L 560
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LD + + V++ L++ LG RFD +A ++
Sbjct: 561 LDKSIKH---------------------------VQVNQENLKEFLGVQRFDYGKATDQN 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG++ +E T M GKG+L TG LG+V++ES Q A+T VR RA L
Sbjct: 594 QV-GQVCGLAWTEVGGDLLTIETTNMPGKGKLTYTGSLGEVMQESIQAAMTVVRTRAEKL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
++ A + + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+T
Sbjct: 653 RINA----DFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVRADVAMTGEIT 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAAHR GIKRV++P+ N +DL E+PA V LEI + +++VLE
Sbjct: 709 LRGEVLPIGGLKEKLLAAHRGGIKRVLIPKENERDLEEIPANVKQDLEIYPVRWIDEVLE 768
Query: 814 QAFE 817
A +
Sbjct: 769 LALQ 772
>gi|410418997|ref|YP_006899446.1| ATP-dependent protease La [Bordetella bronchiseptica MO149]
gi|408446292|emb|CCJ57960.1| ATP-dependent protease La [Bordetella bronchiseptica MO149]
Length = 783
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 327/764 (42%), Positives = 453/764 (59%), Gaps = 76/764 (9%)
Query: 60 GVEKPSGRV------TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP 113
G E P R + ++++G RF V E + AR++ ++ Q E
Sbjct: 73 GTEGPVARYITGQEGAHHLLVQGQARFRVLEFLEGWPFLVARVALVDTPAASDSQTE--- 129
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
A Q K ++ I++L +E+ + LAD+ +I E++ +
Sbjct: 130 ---ARFLQLKQQTIDAIALLPNVPDELADVVRGIESPAL--LADMVTNLIDIKAEQKQDI 184
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L++ DL RL K EL+ L+ +R++++I ++ Q + Q+E +LR+Q+R I++ELG+
Sbjct: 185 LETFDLARRLDKVIELLAARLEVLRLSKEIGERTRAQFDERQRETVLREQLRQIQKELGE 244
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
DD + L+ ++ AGMP + H +KEL RL++M Y R YLE + +LPW
Sbjct: 245 TDDGAAEAAQLKETIEQAGMPEEVLNHARKELSRLQRMGDGSGEYAMLRTYLEWLTELPW 304
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
+ ++ +DL A+ LD DH+GL ++K+RI+EYLAVRKL P+ R P+LCFVGPPGVGK
Sbjct: 305 KHEPQQA-IDLAEARRVLDEDHFGLDKIKRRILEYLAVRKLNPEGRSPILCFVGPPGVGK 363
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSL SIA A GR F R++LGGV DEA+IRGHRRTY+G++PG +I ++R G N V++L
Sbjct: 364 TSLGQSIARATGRAFQRVALGGVHDEAEIRGHRRTYLGALPGNIIQAVRRAGTGNLVLML 423
Query: 414 DEIDKTGS-DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
DEIDK G+ GDP SALLEVLDPEQN F D+YL V +DLS V+F+ TAN +P P
Sbjct: 424 DEIDKLGAGGFHGDPGSALLEVLDPEQNHKFRDNYLAVDYDLSHVMFICTANVLDTVPGP 483
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DRME+I+LPGYT EEK++IA R+LI R L+ +GL E I +A + ++ YTREAG
Sbjct: 484 LRDRMEIIDLPGYTEEEKIQIARRYLIKRQLEANGLRPEQADITDAALAAIVGDYTREAG 543
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VRNLER + ++ R AA++VAE G
Sbjct: 544 VRNLEREIGSVLRHAAMQVAE--------------------------------------G 565
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
++ H + +D A L LGP RF++ E A R + PG++ GL WT GG++
Sbjct: 566 KAGH-----------VSIDTADLGATLGPRRFEN-EVALRTSLPGVATGLAWTPVGGDIL 613
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
F+EA+ + G G L LTGQLGDV+KESAQ ALT + + D L+ DIHIH
Sbjct: 614 FIEASKVPGSGRLILTGQLGDVMKESAQAALTLAKTWSGD----------ALEKVDIHIH 663
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
PAGA PKDGPSAGV + AL SL S + V A+ AMTGE++LRGLVLP+GG+K+K LAA
Sbjct: 664 VPAGATPKDGPSAGVAMFVALASLLSGRPVDANVAMTGEVSLRGLVLPIGGIKEKTLAAL 723
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
R GI V+LP RN KDL +VPA L +L R+ED L A
Sbjct: 724 RAGITTVMLPRRNEKDLDDVPAEARRKLRFVLLDRVEDALRCAL 767
>gi|452747929|ref|ZP_21947718.1| ATP-dependent protease La [Pseudomonas stutzeri NF13]
gi|452008078|gb|EME00322.1| ATP-dependent protease La [Pseudomonas stutzeri NF13]
Length = 798
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 334/774 (43%), Positives = 467/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R ++ + A +S +E +I+
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGVIERFVEVDDHCRAEVSLIEEAEID--- 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
+R+ + L+S EQ + G + +VL I +L D A
Sbjct: 120 ----------ARESEVFTRSLLSQFEQYVQLGKKVPAEVLSSLSSIDEPARLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQQILEITDLPARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+ + + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDIDEGHNEVDELKKRIENAGLSKDAYTKAQAELNKLKQMSPMSAEATVVRT 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
Y++ + ++PW KA+ ++ LDL A+E LD+DHYGL VK RI+EYLAV+K +GPVL
Sbjct: 290 YIDWLVNVPW-KAASKVRLDLAKAEEVLDADHYGLEEVKDRILEYLAVQKRVKKLKGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA + RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIARSTNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ TA
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTA 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IP PLLDRMEVI LPGYT +EK+ IA+R+L P+ ++ +GL L+ EA ++ +
Sbjct: 469 N-SMNIPAPLLDRMEVIRLPGYTEDEKVNIAIRYLAPKQIEANGLKKAELEFQEAAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR+LER LA + R KV ++
Sbjct: 528 IRYYTREAGVRSLERQLAKVCR----KVVKE----------------------------- 554
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
H F + +VD LE LG +F AE+ G GL
Sbjct: 555 ------------HAAEKRFHV----IVDADSLEHFLGVRKF-RYGLAEQQDQVGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG L TG LG+V+ ES ALT VR+RA L + A +
Sbjct: 598 WTQVGGELLTIEAAVVPGKGRLTKTGSLGEVMGESITAALTVVRSRAATLGMAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ +DIHIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKQDIHIHVPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N +DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENQRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|429083884|ref|ZP_19146910.1| ATP-dependent protease La Type I [Cronobacter condimenti 1330]
gi|426547238|emb|CCJ72951.1| ATP-dependent protease La Type I [Cronobacter condimenti 1330]
Length = 784
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 334/771 (43%), Positives = 466/771 (60%), Gaps = 90/771 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGDHFAAKAEYLESPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLSDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDINERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKENEINVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ GE+
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLK-----RIEIT--GEN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
L+ LG RFD ++ RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
HR GIK V++P+ N +DL E+P V+A L+I KR+E+VL A + P+
Sbjct: 727 HRGGIKTVLIPDENKRDLEEIPENVIADLDIHPVKRIEEVLNLALQ-NAPY 776
>gi|452995867|emb|CCQ92255.1| class III heat-shock ATP-dependent LonA protease [Clostridium
ultunense Esp]
Length = 770
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 319/761 (41%), Positives = 457/761 (60%), Gaps = 81/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVE--------QDPDF 115
P+G T +++EGL R + + R YY A + L T E ++ E +
Sbjct: 80 PNG--TIRILIEGLERARILSFTKRDEYYEAEVEILHDTGTEGQETEALMRTALNHFEQY 137
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L++ K T L SV++ GR LADI + E+ +L+
Sbjct: 138 IRLTK--KITPETLSSVMDMDDP--GR------------LADIIASHLPFRLHEKQEILE 181
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+++ RL L++ + + + +I Q+V+ Q+ K+Q+E+ LR+QM+AI++ELG+ +
Sbjct: 182 KTNVQERLETLLRLLNNEREVLELERRIGQRVKKQMEKTQREYYLREQMKAIQKELGEKE 241
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
+ L M+ +P ++ V+KE+ RL+KM + R Y+E + LPW K
Sbjct: 242 GRMGEAQELRELMEKTELPDHVRAKVEKEIERLEKMPSAAVEGSVIRTYIEWLLSLPWAK 301
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+E+ +LD++ A++ L+ DHYGL +VK+RI+EYLAV+K+ +GP+LC VGPPGVGKTS
Sbjct: 302 QTED-NLDIQHAEQVLNEDHYGLEKVKERILEYLAVQKMVGKMKGPILCLVGPPGVGKTS 360
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
LA SIA +LGR+F+RISLGGV+DEA+IRGHRRTY+G++PGR+I G+K G NPV LLDE
Sbjct: 361 LARSIARSLGRRFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGMKTAGTVNPVFLLDE 420
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
+DK SD RGDPA+ALLEVLDPEQN F+DHY+ P+DLS+V+F+ TAN IP PLLD
Sbjct: 421 VDKMASDFRGDPAAALLEVLDPEQNANFSDHYIEEPYDLSRVLFICTANTTYTIPRPLLD 480
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI + GYT EKL+IA ++L+PR L +HGL E +QI + + +I++YTREAGVRN
Sbjct: 481 RMEVIPISGYTELEKLKIAEKYLVPRELKEHGLNKEKMQIQDGALLKLIRQYTREAGVRN 540
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
L+R +A LAR AA K+ E+++
Sbjct: 541 LDRQIATLARKAAKKIVSGEKKR------------------------------------- 563
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
+V+ +E++LG P F AER G GL WT GG+ +E
Sbjct: 564 ------------VVITPKTIEQMLGKPLFH-YGMAEREDQIGAVTGLAWTEAGGDTLTIE 610
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ + G G+L LTG+LGDV+KESAQ A +++R+R L++ + DIHIH P
Sbjct: 611 VSILPGNGKLTLTGKLGDVMKESAQAAFSYIRSRTEQLKI----DPTFYEKYDIHIHVPE 666
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA+PKDGPSAG+T+ TAL S + V + MTGE+TLRG VLP+GG+K+K L+AHR G
Sbjct: 667 GAIPKDGPSAGITIATALASALTNTPVSREVGMTGEITLRGRVLPIGGLKEKALSAHRAG 726
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+K +I P+ N KDL E+P +V L+ IL + M+ VL A
Sbjct: 727 LKTIICPKENEKDLEEIPESVRKDLKFILVEHMDQVLAHAL 767
>gi|21241840|ref|NP_641422.1| ATP-dependent serine proteinase La [Xanthomonas axonopodis pv.
citri str. 306]
gi|381170420|ref|ZP_09879577.1| ATP-dependent protease La [Xanthomonas citri pv. mangiferaeindicae
LMG 941]
gi|21107220|gb|AAM35958.1| ATP-dependent serine proteinase La [Xanthomonas axonopodis pv.
citri str. 306]
gi|380689081|emb|CCG36064.1| ATP-dependent protease La [Xanthomonas citri pv. mangiferaeindicae
LMG 941]
Length = 823
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 336/787 (42%), Positives = 481/787 (61%), Gaps = 63/787 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 69 YTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGQGTEIEASD-- 121
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 122 ----AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL+
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V+FV
Sbjct: 411 LNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E ++I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIKANGLKPEEIEIASDAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 530 QDIVRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
P + V+ + + + V+ L+K LG RFD A E G+
Sbjct: 565 ---------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-GLVT 614
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 615 GLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----D 670
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ +R +RAD AMTGE+TLRG V
Sbjct: 671 VDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSILTRVPIRADVAMTGEITLRGRVSA 730
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGC 820
+GG+K+K+LAA R GI+ V++P+ N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 731 IGGLKEKLLAALRGGIRTVLIPDENRKDLADIPPNVTRDLKIVPVKWIDEVLDLALERPL 790
Query: 821 PWRQHSK 827
++ SK
Sbjct: 791 APKKASK 797
>gi|383816698|ref|ZP_09972090.1| DNA-binding ATP-dependent protease La [Serratia sp. M24T3]
gi|383294410|gb|EIC82752.1| DNA-binding ATP-dependent protease La [Serratia sp. M24T3]
Length = 784
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE + E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPAVDEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ +E + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIEDAAR----------------LADTIAAHMPLKLVDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIDAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DH+GL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRKAQEVLDTDHFGLERVKDRILEYLAVQTRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGREYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKKNELTVEDSAIIGIIRFYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKTLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+V++ L+ LG + D A RV G GL WT GGE+
Sbjct: 568 ------------IVINGDNLKDYLGVQKVDYGRADTENRV---GQVTGLAWTEVGGELLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P+ N +DL E+P VLA LEI KR++DVL A +
Sbjct: 727 HRGGIKVVLIPDDNKRDLEEIPDNVLADLEIHPVKRIDDVLNFALQN 773
>gi|392952789|ref|ZP_10318343.1| DNA-binding ATP-dependent protease La [Hydrocarboniphaga effusa
AP103]
gi|391858304|gb|EIT68833.1| DNA-binding ATP-dependent protease La [Hydrocarboniphaga effusa
AP103]
Length = 816
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 328/751 (43%), Positives = 456/751 (60%), Gaps = 71/751 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKAT---AME 128
+VL+G RF V E + AR+ + VE D + QF A A+E
Sbjct: 127 LVLQGEQRFRVIEFLKDLPFAAARVERI---------VEDDTRSTEIEAQFHALKQRAVE 177
Query: 129 LISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATE 188
+ +L T +E+ +LAD +I E+ L++ DL RL K
Sbjct: 178 AVQLLPDAAAELVPTVQAIESP--GQLADFVAGYLDIKPAEKQEYLETFDLLKRLQKLQW 235
Query: 189 LVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKM 248
L+ ++ +R++ I Q+ + + K Q+EF+LR+Q++ I++ELGD+++ +L LE+ +
Sbjct: 236 LLAHRVEVLRLSRDIGQQTKETMEKRQREFMLREQLKTIQKELGDDEEGGAELEELEKAI 295
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELIADLPWEKASEEIDLDLKAA 307
AGMP ++ K +KEL+RL+ M G +S R YL+ + +LPW K D+D+ A
Sbjct: 296 AEAGMPEDVEKQARKELKRLRAMGNSGAGESSMVRTYLDTLVELPWSKLGGH-DVDIAKA 354
Query: 308 KERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRK 367
+ LD DH+GL ++K+RI+E+LAV+KL P R P+LCF GPPGVGKTSL SIA A GR
Sbjct: 355 RAVLDEDHFGLDKIKRRILEFLAVQKLNPQGRSPILCFSGPPGVGKTSLGQSIAKATGRA 414
Query: 368 FIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGS-DVRGD 426
F R+SLGGV DEA+IRGHRRTYIGS+PG +I L++ G + V++LDEIDK G+ GD
Sbjct: 415 FARVSLGGVHDEAEIRGHRRTYIGSLPGNIIQALRKAGTRDAVIMLDEIDKLGAGGFHGD 474
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
P+SALLEVLDPEQN TF D+YL VPFDLSKV+F+ATAN IP PL DRME+I+L GYT
Sbjct: 475 PSSALLEVLDPEQNGTFRDNYLGVPFDLSKVMFIATANVLDTIPGPLRDRMEIIQLAGYT 534
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EKL+IA R+L+ R +GL +E + EA ++ +I YTRE+GVRNLER + + RA
Sbjct: 535 EAEKLQIAQRYLVERQRKANGLSAEQASVSEAALREIIGHYTRESGVRNLEREIGTVFRA 594
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS 606
AA+K+AE G ++E
Sbjct: 595 AAMKIAE---------------------------GTAQKVE------------------- 608
Query: 607 PLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELH 666
+D L +LG F++ E A+R PG++ GL WT GG++ F+EA G+G L
Sbjct: 609 ---IDRDQLTGILGAAHFEN-EVAQRAGVPGVATGLAWTPVGGDILFIEAQRAPGRGHLT 664
Query: 667 LTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAG 726
LTGQLGDV+KESAQ ALT V++R +L L E L D+H+H PAGA PKDGPSAG
Sbjct: 665 LTGQLGDVMKESAQAALTLVKSRHLELGLDIE----TLARTDVHVHVPAGATPKDGPSAG 720
Query: 727 VTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNL 786
V + AL SL + ++VRAD AMTGE++LRGLVLPVGG+K+K++AAHR GI+ V+LP RN
Sbjct: 721 VAMFIALASLLTGRKVRADVAMTGEISLRGLVLPVGGIKEKVIAAHRAGIRTVMLPARNR 780
Query: 787 KDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+D ++P V L+ + +R+++ E A E
Sbjct: 781 RDYDDIPQEVREDLKFVWLERVDEAAEVAME 811
>gi|120599412|ref|YP_963986.1| ATP-dependent protease La [Shewanella sp. W3-18-1]
gi|146292592|ref|YP_001183016.1| ATP-dependent protease La [Shewanella putrefaciens CN-32]
gi|386313269|ref|YP_006009434.1| ATP-dependent protease La [Shewanella putrefaciens 200]
gi|120559505|gb|ABM25432.1| Lon-A peptidase. Serine peptidase. MEROPS family S16 [Shewanella
sp. W3-18-1]
gi|145564282|gb|ABP75217.1| ATP-dependent protease La [Shewanella putrefaciens CN-32]
gi|319425894|gb|ADV53968.1| ATP-dependent protease La [Shewanella putrefaciens 200]
Length = 785
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 328/777 (42%), Positives = 471/777 (60%), Gaps = 84/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R + + ++ A+ LE +E ++
Sbjct: 72 GTVASILQL---LKLPDGTVK--VLVEGGRRAKITRYTQETEFFVAKAEYLESEPLEDKE 126
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q +I L+++ + +S +++ + LAD
Sbjct: 127 EEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGIDEAAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ V++ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKLEDKQSVLEMVNVGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ D+ AL RK++ A MPS + EL +L+ M P T
Sbjct: 231 NEQMKAIQKELGDLDEGHDEFEALNRKIEEANMPSEAKEKALAELNKLRMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW + S+ I DL A+E LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 291 VRSYVDWMTSVPWSQRSK-IKRDLAKAQEVLDTDHYGLEKVKERILEYLAVQSRVRQLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKVIQK 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + ++++GL + + + ++ +
Sbjct: 470 ATSN-SMDIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLLTKQIERNGLKASEIHVDDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR+LER L+ + R
Sbjct: 529 IGIIRYYTREAGVRSLERELSKICRKV--------------------------------- 555
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+++I + +S V+ V++ L+ LG RF D AE G
Sbjct: 556 -----VKMILLDKSVKSVT----------VNQDNLKSFLGVQRF-DYGKAESKNQIGQVT 599
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L + A
Sbjct: 600 GLAWTQVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQLGINA--- 656
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + RDIH+H P GA PKDGPSAG + TALVS + VR+D AMTGE+TLRG VLP
Sbjct: 657 -DFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRSDVAMTGEITLRGEVLP 715
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK V++P+ N +DL E+PA V+A LEI + +++VL+ A E
Sbjct: 716 IGGLKEKLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWVDEVLKLALE 772
>gi|395232659|ref|ZP_10410909.1| DNA-binding ATP-dependent protease La [Enterobacter sp. Ag1]
gi|394733061|gb|EJF32700.1| DNA-binding ATP-dependent protease La [Enterobacter sp. Ag1]
Length = 784
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 328/767 (42%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGDHFSAQAEYLNSPAIEEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLSDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDINERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAREKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVTFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L++ ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKKGELKVDDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG RFD ++ RV G GL WT GG++
Sbjct: 568 ------------IEINGDNLKDYLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P+ N +DL E+P V+A L I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPDDNKRDLEEIPDNVIADLTIHPVKRIEEVLALALQN 773
>gi|418520579|ref|ZP_13086627.1| ATP-dependent serine proteinase La [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410703464|gb|EKQ61955.1| ATP-dependent serine proteinase La [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 823
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 336/787 (42%), Positives = 481/787 (61%), Gaps = 63/787 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 69 YTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGQGTEIEASD-- 121
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 122 ----AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL+
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V+FV
Sbjct: 411 LNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E ++I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIKANGLKPEEIEIASDAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 530 QDIVRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
P + V+ + + + V+ L+K LG RFD A E G+
Sbjct: 565 ---------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-GLVT 614
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 615 GLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----D 670
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ +R +RAD AMTGE+TLRG V
Sbjct: 671 VDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSILTRVPIRADVAMTGEITLRGRVSA 730
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGC 820
+GG+K+K+LAA R GI+ V++P+ N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 731 IGGLKEKLLAALRGGIRTVLIPDENRKDLADIPPNVTRDLKIVPVKWIDEVLDLALERPL 790
Query: 821 PWRQHSK 827
++ SK
Sbjct: 791 TPKKASK 797
>gi|424795848|ref|ZP_18221656.1| Endopeptidase La [Xanthomonas translucens pv. graminis ART-Xtg29]
gi|422795262|gb|EKU23985.1| Endopeptidase La [Xanthomonas translucens pv. graminis ART-Xtg29]
Length = 824
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 340/777 (43%), Positives = 475/777 (61%), Gaps = 58/777 (7%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A+ L L ++ P G T V++EGL R SV++++ R ++
Sbjct: 69 YNVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVSVEKVAERDG------------ALQ 111
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
E E D R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 112 GEGSEIDAVESREEREVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+++++ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLETLEVGERLEMLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K S+ + DLKAA+E LD+DHYGL +VK RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRSK-VRKDLKAAQETLDADHYGLEKVKDRILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +V NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V+FV
Sbjct: 411 LNKVSSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ L +GL + L+I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLAIAMRYLVPKQLKANGLKGDELEIAADAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A + P V + + D
Sbjct: 530 RDIVRYYTRESGVRNLEREVAKICRKVVKEIA-----LSGPQPAAVKKAPAKKGAAPRKD 584
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
A V V L+K LG RFD A E+ G+
Sbjct: 585 KARVS------------------------VGSRNLDKYLGVRRFDFGRAEEQNEV-GLVT 619
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +E+T + GKG + LTGQLGDV+KESA AL+ VR+RA L +
Sbjct: 620 GLAWTEVGGDLLQIESTLVPGKGAVILTGQLGDVMKESASAALSVVRSRAERLGI----E 675
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ V+AD AMTGE+TLRG V
Sbjct: 676 VDFLQKHDVHLHVPDGATPKDGPSAGIAMVTSLVSMLTKVPVKADVAMTGEITLRGRVSA 735
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI VI+PE N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 736 IGGLKEKLLAALRGGIHTVIIPEENRKDLADIPDNVTRDLKIVPVKWIDEVLDLALE 792
>gi|227821609|ref|YP_002825579.1| ATP-dependent protease La [Sinorhizobium fredii NGR234]
gi|227340608|gb|ACP24826.1| ATP-dependent protease La [Sinorhizobium fredii NGR234]
Length = 805
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 331/790 (41%), Positives = 460/790 (58%), Gaps = 75/790 (9%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ A+D + I+ G A L L ++ P G V V++EG R + ++R
Sbjct: 56 TQINATDDDPEASAIY--RVGTIANVLQL---LKLPDGTVK--VLVEGRARAEIDRYTSR 108
Query: 89 GTYYTARISSLEMTKIEMEQVEQDP-DFIALSRQFKATAMELISVLEQKQKTGGRT-KVL 146
+Y A L + E+DP + ALSR + E S ++ +K V
Sbjct: 109 EDFYEAVAHVLR-------EPEEDPVEIEALSR---SVVSEFESYVKLNKKISPEVVGVA 158
Query: 147 LETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQK 206
+ KLAD + I E+ ML++ +K+RL KA ++ + ++V ++I +
Sbjct: 159 SQIDDYSKLADTVASHLSIKIVEKQEMLETTSVKMRLEKALGFMEGEISVLQVEKRIRSR 218
Query: 207 VEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELR 266
V+ Q+ K+Q+E+ L +QM+AI++ELGD++D D++ +E ++ + + EL+
Sbjct: 219 VKRQMEKTQREYYLNEQMKAIQKELGDSEDGRDEMAEIEERIAKTKLSKEAREKADAELK 278
Query: 267 RLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRII 326
+L++M P T R YL+ + LPW K S+ I DL A++ L++DH+GL +VK+RI+
Sbjct: 279 KLRQMSPMSAEATVVRNYLDWLLGLPWGKKSK-IKTDLNHAEKVLEADHFGLDKVKERIV 337
Query: 327 EYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHR 386
EYLAV+ +GP+LC VGPPGVGKTSLA SIA A GR++IR++LGGV+DEA+IRGHR
Sbjct: 338 EYLAVQARSSKIKGPILCLVGPPGVGKTSLAKSIAKATGREYIRMALGGVRDEAEIRGHR 397
Query: 387 RTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDH 446
RTYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN TF DH
Sbjct: 398 RTYIGSMPGKVVQSMKKAKRSNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNSTFMDH 457
Query: 447 YLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQH 506
YL V +DLS V+F+ TAN IP PL+DRMEVI + GYT EEKL IA RHL+P+ + H
Sbjct: 458 YLEVEYDLSNVMFITTANTLN-IPAPLMDRMEVIRIAGYTEEEKLEIAKRHLLPKAIRDH 516
Query: 507 GLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDV 566
L + + + VIQ YTREAGVRN ER L LAR A ++ + + ++
Sbjct: 517 ALQPNEFSVTDGALMAVIQTYTREAGVRNFERELMKLARKAVTEILKGKTKKV------- 569
Query: 567 HRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDD 626
E T + N + LG PRF
Sbjct: 570 --------------------------EVTADNVNDY----------------LGVPRFRH 587
Query: 627 REAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWV 686
E AER G+ GL WT GGE+ +E M GKG + +TG L DV+KES A ++V
Sbjct: 588 GE-AERDDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYV 646
Query: 687 RARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADT 746
R+RA D + L RDIH+H P GA PKDGPSAGV + TA+VS+ + + D
Sbjct: 647 RSRAIDFGIEPP----LFDKRDIHVHVPEGATPKDGPSAGVAMATAIVSVMTGIPIHKDV 702
Query: 747 AMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAK 806
AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL E+P V +LEII
Sbjct: 703 AMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLAEIPDNVKNNLEIIPVS 762
Query: 807 RMEDVLEQAF 816
RM +VLE A
Sbjct: 763 RMGEVLEHAL 772
>gi|289664182|ref|ZP_06485763.1| ATP-dependent serine proteinase La [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 823
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 334/777 (42%), Positives = 480/777 (61%), Gaps = 63/777 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 69 YTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGQGTEVEASD-- 121
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 122 ----AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL+
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V+FV
Sbjct: 411 LNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNTSFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ + +GL E +++ +
Sbjct: 471 ATSN-SLSIPGPLLDRMEVIRIPGYTEDEKLNIAMRYLVPKQIKANGLKPEEIEVGSDAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 530 QDIVRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
P + V+ + + + V+ L+K LG RFD A E G+
Sbjct: 565 ---------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-GLVT 614
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 615 GLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----D 670
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ +RAD AMTGE+TLRG V
Sbjct: 671 VDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSVLAKVPIRADVAMTGEITLRGRVSA 730
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI+ V++P+ N KDL ++PA V L+I+ K +++VL+ A E
Sbjct: 731 IGGLKEKLLAALRGGIRTVLIPDENRKDLADIPANVTRDLKIVPVKWIDEVLDLALE 787
>gi|325281696|ref|YP_004254238.1| ATP-dependent protease La [Odoribacter splanchnicus DSM 20712]
gi|324313505|gb|ADY34058.1| ATP-dependent protease La [Odoribacter splanchnicus DSM 20712]
Length = 806
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 314/799 (39%), Positives = 476/799 (59%), Gaps = 71/799 (8%)
Query: 21 DSSERASKVQVGASDGKNQQ--EVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLC 78
DS +++ + V A N + ++ + G A L + +E P G T I+ +G
Sbjct: 73 DSYRQSALIGVVAQKDTNTENPDINDLYQIGTVASILKI---LEMPDGTTTAII--QGKR 127
Query: 79 RFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQK 138
RF ++++ Y+ +IS K E E DP++ A++ K A +++
Sbjct: 128 RFLLEDILYDDPYHVGKIS----LKKEEGVPENDPEYNAIAESLKDMASKIVKYSSHIPN 183
Query: 139 TGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIR 198
G +E++ L + ++ ++ ++ + +L+ +LK R K E++ + + +
Sbjct: 184 EAGFALKNIESMLF--LINFISSNTDVDYQNKQELLEIDNLKQRAIKLLEILSKQVSLLE 241
Query: 199 VAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIW 258
+ I +KV+ + K Q+E+ L QQM+ I++ELG N DE+ + LE ++ N+
Sbjct: 242 LKNDIQKKVKMDIDKQQREYFLHQQMKTIQDELGGNPTDEE-IKELEELAETKEWNGNVR 300
Query: 259 KHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGL 318
+ KEL +LK++ P P Y+ YL + DLPW SE+ +LDL+ A++ LD+DH+GL
Sbjct: 301 EIFNKELNKLKRLNPSSPDYSVQSNYLREMLDLPWNHLSED-NLDLEHARQVLDADHFGL 359
Query: 319 VRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKD 378
+VK+RI+EYLAV KLK D + P+LC GPPGVGKTSL S+A AL R+F+R+SLGG+ D
Sbjct: 360 EKVKERILEYLAVLKLKADMKSPILCLYGPPGVGKTSLGKSVARALNREFVRMSLGGLHD 419
Query: 379 EADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPE 438
E++IRGHR+TYIG+MPGR++ +K+ G NPV +LDEIDK G+D RGDP SALLEVLDPE
Sbjct: 420 ESEIRGHRKTYIGAMPGRILQSIKKAGTSNPVFILDEIDKVGNDFRGDPQSALLEVLDPE 479
Query: 439 QNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHL 498
QN +F+D++L++ +DLSKV+F+ATAN I PL DRME+IE+ GY EEK IA RHL
Sbjct: 480 QNGSFHDNFLDIDYDLSKVMFIATANDLSTIAGPLRDRMEIIEVTGYLMEEKREIAKRHL 539
Query: 499 IPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQ 558
IP+ L+ HG+ + + IP+ ++ L+I++YTRE+GVR+L+ +A + R A KVA ++
Sbjct: 540 IPKQLENHGITAGHVTIPDEIIDLIIEKYTRESGVRSLDMTIAKIMRHVARKVAMNKKFT 599
Query: 559 -ALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEK 617
L +K LGSP+ G E+
Sbjct: 600 ITLDENKVKEYLGSPIFSREEYQGNEL--------------------------------- 626
Query: 618 VLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKE 677
PG+ GL WT GGE+ ++E++ +GKG L LTG LG+V+KE
Sbjct: 627 ------------------PGVVTGLAWTAVGGEILYIESSYSKGKGHLSLTGNLGEVMKE 668
Query: 678 SAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLF 737
SA +AL ++++ A ++ + + + + DIH+H PAGAVPKDGPSAG+T+VTALVS
Sbjct: 669 SATLALEYIKSHAKEIGIDEK----MFEENDIHVHVPAGAVPKDGPSAGITMVTALVSAL 724
Query: 738 SRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVL 797
+ ++V+ AMTGE+TLRG VLPVGG+++KILAA R GIK +IL N KD+ ++ L
Sbjct: 725 TGRKVKKAIAMTGEITLRGKVLPVGGIREKILAAKRAGIKEIILCSENKKDIDDIKKEYL 784
Query: 798 ASLEIILAKRMEDVLEQAF 816
L+ A +++VLE A
Sbjct: 785 KGLKFHYADHIKEVLETAL 803
>gi|329121865|ref|ZP_08250480.1| ATP-dependent protease LonB [Dialister micraerophilus DSM 19965]
gi|327467803|gb|EGF13295.1| ATP-dependent protease LonB [Dialister micraerophilus DSM 19965]
Length = 777
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 317/745 (42%), Positives = 453/745 (60%), Gaps = 61/745 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+++EG+ R +V+ + Y TA ++ E + + L+ F+ IS
Sbjct: 92 ILVEGVSRVTVKSIKRTQDYVTAEFEKVKEIYPEDNIRAEAYRRVLLTSFFEWMQQGKIS 151
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
+ E++ T L + D I + +L+++D+ RL + +D
Sbjct: 152 LSEEQ------TAQLRSMSEVGSTVDFIAQQLIIPMNRKQDLLETLDVMERLKAVQKYID 205
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+Q R+ +I +V ++ K Q+++ LRQ++++I ++LGD E + +K+ +
Sbjct: 206 DEIQIGRMEAEINGEVRTRMEKEQRDYFLRQKIKSIHDKLGDRISQEQEAEEYRKKLAKS 265
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
G+P ++KE+ L+ M P R YLE I LPW+K S++ LDL AK+ L
Sbjct: 266 GIPEESKAKIEKEISHLETMPPMMAETAIVRNYLEWIMGLPWKKESKD-KLDLHHAKKML 324
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D +H+GL ++K+ I+EYLAVR L P+A+ P++CFVGPPGVGKTSLA SIA A+GRKF RI
Sbjct: 325 DKEHFGLEKIKEHILEYLAVRILAPNAKAPIICFVGPPGVGKTSLAQSIADAMGRKFARI 384
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGG+ DEA+IRGHRRTYIG+MPGR I+ + + NP++LLDEIDK GSD RGDPASAL
Sbjct: 385 SLGGLHDEAEIRGHRRTYIGAMPGRFIEAINQAKTKNPLILLDEIDKVGSDFRGDPASAL 444
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LE LDPEQNK F+D+Y+++PFD SKV F+ATAN IP LLDRMEVI L GYT +EKL
Sbjct: 445 LEALDPEQNKAFHDNYIDIPFDFSKVFFIATANTLSTIPAALLDRMEVISLSGYTEDEKL 504
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
IA R+L+PR + GL +E ++ A+++ +I+ YTREAGVR LER + L R A K+
Sbjct: 505 EIAKRYLVPRQKEMSGLKNEDVRFTPALIRKIIRSYTREAGVRELERTIGTLCRKVAKKI 564
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
+++E LP+ L S + L GAE + +PM E
Sbjct: 565 VLKDEE--LPN------LTSKTIIKYL--GAE---KFMPMSEEH---------------- 595
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
E ++G RV GL WT GGEV EA ++GKG L LTGQL
Sbjct: 596 ----ESIVG-----------RVN------GLAWTAVGGEVLDTEAVTIKGKGRLILTGQL 634
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDV+KESA+ A T++R+RA L L N + D HIH P GAVPKDGPSAG+T+ T
Sbjct: 635 GDVMKESAETAYTYIRSRAKKLGLKE----NFYESLDTHIHLPEGAVPKDGPSAGITMAT 690
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
A+ S+++ ++VR DTAMTGE+TL G VLP+GG+K+K+LAA ++GIK+V++P +N +DLV+
Sbjct: 691 AMASIYTGRKVRGDTAMTGEITLTGEVLPIGGLKEKLLAAKQFGIKQVLIPIKNKRDLVD 750
Query: 792 VPAAVLASLEIILAKRMEDVLEQAF 816
+P + ++II K +E+VL A
Sbjct: 751 MPKNIQEGIDIIFVKNVEEVLAHAL 775
>gi|260596811|ref|YP_003209382.1| DNA-binding ATP-dependent protease La [Cronobacter turicensis
z3032]
gi|429102780|ref|ZP_19164754.1| ATP-dependent protease La Type I [Cronobacter turicensis 564]
gi|260215988|emb|CBA28642.1| ATP-dependent protease La [Cronobacter turicensis z3032]
gi|426289429|emb|CCJ90867.1| ATP-dependent protease La Type I [Cronobacter turicensis 564]
Length = 784
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 332/769 (43%), Positives = 466/769 (60%), Gaps = 86/769 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGDHFAAKAEYLESPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLSDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDINERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKENEIDVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ GE+
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLK-----RIEIT--GEN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
L+ LG RFD ++ RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + + + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINS----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A + P+
Sbjct: 729 GGIKTVLIPDENKRDLEEIPENVIADLDIHPVKRIEEVLTLALQ-NAPY 776
>gi|365969263|ref|YP_004950824.1| Lon protease [Enterobacter cloacae EcWSU1]
gi|365748176|gb|AEW72403.1| Lon protease [Enterobacter cloacae EcWSU1]
Length = 784
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE ++ E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDDGEHFSAKAEYLESPQLDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L + L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKANELTVEDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+V++ L LG RFD A RV G GL WT GG++
Sbjct: 568 ------------IVINGDNLHAYLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPYENKRDLEEIPDNVIADLQIHPVKRIEEVLTLALQN 773
>gi|104781015|ref|YP_607513.1| DNA-binding ATP-dependent protease La [Pseudomonas entomophila L48]
gi|95110002|emb|CAK14707.1| DNA-binding ATP-dependent protease La [Pseudomonas entomophila L48]
Length = 798
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 469/777 (60%), Gaps = 85/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ + + A +S ++ T+ +
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFTEVEGHVRAEVSLIDETETAERE 122
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q ++ L ++ A E++S L ++ G +L D
Sbjct: 123 SEVFVRTLLSQFEQYVQLGKKVPA---EVLSSLNSIEEPG-------------RLVDTMS 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ VDL+ R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIVDLQARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + Q EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEVEELKKRIDAAGLPKDALAKAQAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW KA ++ LDL A+E LDSDHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYLDWLVQVPW-KAQSKVRLDLAKAEEILDSDHYGLEEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L+P+ + +GL + L++ + +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKDELEVDVSAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R
Sbjct: 525 RDIIRFYTREAGVRGLERQIAKVCRKV--------------------------------- 551
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ E T ++T LE++LG +F AE+ G
Sbjct: 552 ----------VKEHTGNKQVKVKVTG------EQLEQLLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRAQSLGIAA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + RD+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKRDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|167032912|ref|YP_001668143.1| ATP-dependent protease La [Pseudomonas putida GB-1]
gi|166859400|gb|ABY97807.1| ATP-dependent protease La [Pseudomonas putida GB-1]
Length = 798
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 332/774 (42%), Positives = 467/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ + + A +S ++ T
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFTEVEGHIRAEVSLIDETD----- 117
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
A R+ + L+S EQ + G + +VL I +L D A
Sbjct: 118 --------AAERESEVFVRTLLSQFEQYVQLGKKVPAEVLSSLNSIEEPGRLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQEILEIVDLTTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRS 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +PW KA ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RGPVL
Sbjct: 290 YLDWLVQVPW-KAQSKVRLDLTKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTS 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IPP LLDRMEVI LPGYT +EK+ IA+++L+P+ + +GL E L++ + ++ +
Sbjct: 469 N-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKEELEVDVSAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR LER +A + R + Q+Q + +S+
Sbjct: 528 IRYYTREAGVRGLERQIAKVCRKVVKEHTGQKQVKVKVASE------------------- 568
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
LE +LG +F AE+ G GL
Sbjct: 569 ------------------------------QLEHLLGVRKF-RYGLAEQQDQIGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A +
Sbjct: 598 WTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|357009625|ref|ZP_09074624.1| Lon [Paenibacillus elgii B69]
Length = 776
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 312/753 (41%), Positives = 451/753 (59%), Gaps = 66/753 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EG+ R + E YY + L EQ DP+ AL R
Sbjct: 84 PNG--TIRVLVEGVVRAEIAEFLVNDEYYEVHVRELP------EQETSDPEIDALMRTVL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
I++ K+ T + + +LAD+ + + +++ +L++VD+++RL
Sbjct: 136 TQFEHYINL--SKKVTPETLAAVSDIDEPGRLADVICSHLSLKIKDKQEILETVDVRMRL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K +++ + + + KI+Q+V+ Q+ K+QKE+ LR+QM+AI++ELGD + ++
Sbjct: 194 EKLLAILNNEREVLELERKISQRVKKQMEKTQKEYYLREQMKAIQKELGDKEGRAGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L ++ + +P + + ++KE+ RL+KM + R Y++ + LPW +++E+ DLD
Sbjct: 254 LRNQLAQSDVPEKVREKIEKEIDRLEKMPATSAEGSVIRNYIDWLLGLPWSQSTED-DLD 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
++ A+E L+ DHYGL + K+R++EYLAV+KL +GP+LC VGPPGVGKTS+A SIA +
Sbjct: 313 IRKAEEILNQDHYGLEKPKERVLEYLAVQKLVKKLKGPILCLVGPPGVGKTSIARSIARS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
LGR+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV LLDEIDK D
Sbjct: 373 LGRQFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKNAGTNNPVFLLDEIDKMAMDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDPASALLEVLDPEQN TF+DH++ VPFDLS V+FV TAN IP PLLDRMEV+ +P
Sbjct: 433 RGDPASALLEVLDPEQNSTFSDHFVEVPFDLSNVMFVTTANAVHNIPRPLLDRMEVLYIP 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EKL IA +L+PR + HGL L I E + ++ YTREAGVRNLE+ ++++
Sbjct: 493 GYTEIEKLHIARNYLLPRQRENHGLQDGQLVIDEDALMSTVREYTREAGVRNLEQQISSI 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA E++ + H ++
Sbjct: 553 CRKAA-------------------------------------KEIVGGASTVHLKADN-- 573
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
L++ LG P+F ER G GL WT GG +E T M G G
Sbjct: 574 -----------LKEYLGQPKFRYGMVEERDQV-GAVTGLAWTEVGGVTLVIEVTVMPGSG 621
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A ++ R+R + + + D+H+H P GA+PKDGP
Sbjct: 622 KLTLTGKLGDVMKESAQAAFSYTRSRVEQFGIQP----DFHEKYDVHVHMPEGAIPKDGP 677
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+ + TAL+S + V AMTGE+TLRG VLP+GG+K+K +AAHR GI+ V+LP+
Sbjct: 678 SAGIAMGTALISALTNIPVSRHVAMTGEITLRGRVLPIGGLKEKAMAAHRAGIRTVLLPK 737
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N KD+ E+P +V + L I M++VLE A
Sbjct: 738 DNAKDIEEIPESVRSELTFIPVAHMDEVLEHAL 770
>gi|378578412|ref|ZP_09827087.1| DNA-binding ATP-dependent protease La [Pantoea stewartii subsp.
stewartii DC283]
gi|377818692|gb|EHU01773.1| DNA-binding ATP-dependent protease La [Pantoea stewartii subsp.
stewartii DC283]
Length = 784
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 325/771 (42%), Positives = 463/771 (60%), Gaps = 90/771 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R ++ L+ G ++ A+ L +IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRANITTLADNGDHFVAQAEYLVSPEIEEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNNIDDAAR----------------LADTVAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DTPDEYEALKRKIDAAKMPQEAREKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRKAQETLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L S + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKSSEITVEDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A + + L+D
Sbjct: 544 LERELSKLCRKA---------------------VKTLLMD-------------------- 562
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
+ + ++ L+ LG FD ++ RV G GL WT GG++
Sbjct: 563 -------KTKKHITINGENLKDFLGVQHFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VR++ AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRSNVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
HR GIK V++P+ N +DL E+P V+A LEI KR+E+VL A E P+
Sbjct: 727 HRGGIKVVLIPDENKRDLEEIPQNVIADLEIHPVKRIEEVLNLALE-NAPY 776
>gi|84622591|ref|YP_449963.1| ATP-dependent serine proteinase La [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|84366531|dbj|BAE67689.1| ATP-dependent serine proteinase La [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 787
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 335/780 (42%), Positives = 478/780 (61%), Gaps = 63/780 (8%)
Query: 43 IHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT 102
+ H G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 30 VDLHTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGQGTEVEAS 84
Query: 103 KIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLAD 157
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 85 D------AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLAD 132
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
+ ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E
Sbjct: 133 TIAPHIGVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQRE 192
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 193 YYLNEQMKAIQKELGDLDDVPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAE 252
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+
Sbjct: 253 AAVVRNYLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQ 311
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL
Sbjct: 312 MKGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRL 371
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+ L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V
Sbjct: 372 VQNLNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEV 431
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ + +GL E ++I
Sbjct: 432 MFVATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIAMRYLVPKQIKANGLKPEEIEIGG 490
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
++ +++ YTRE+GVRNLER +A + R ++A
Sbjct: 491 DAIQDIVRYYTRESGVRNLEREVAKICRKVVKEIA------------------------- 525
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
LA P + V+ + + + V+ L+K LG RFD A E G
Sbjct: 526 LAG---------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-G 575
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+ GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 576 LVTGLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI-- 633
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ +RAD AMTGE+TLRG
Sbjct: 634 --DVDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSVLTKVPIRADVAMTGEITLRGR 691
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
V +GG+K+K+LAA R GI+ V++P N KDL ++PA V L+I+ K +++VL+ A E
Sbjct: 692 VSAIGGLKEKLLAALRGGIRTVLIPGENRKDLADIPANVTRDLKIVPVKWIDEVLDLALE 751
>gi|373957414|ref|ZP_09617374.1| anti-sigma H sporulation factor, LonB [Mucilaginibacter paludis DSM
18603]
gi|373894014|gb|EHQ29911.1| anti-sigma H sporulation factor, LonB [Mucilaginibacter paludis DSM
18603]
Length = 824
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 316/772 (40%), Positives = 451/772 (58%), Gaps = 70/772 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G A + + ++ P G T V+L+G RF ++E Y A I + K
Sbjct: 100 HQVGTIALIIKM---LQMPDGNTT--VILQGKKRFMLKEEIQSEPYIKATIQPFQEVK-- 152
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
++D +F A K AM ++ + G +E+ L + ++
Sbjct: 153 ---SKEDKEFKATISSIKDMAMSIVQLSPNIPSEAGIAIRNIESTSF--LINFISSNMNA 207
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
+ +L+ +L+ R E + +Q + + +I KV L K Q+++ L QQ++
Sbjct: 208 DMAAKQKLLEISNLRDRAKLILEHLTVEIQMLELKNQIQSKVRTDLDKQQRDYFLNQQLK 267
Query: 226 AIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYL 285
I+EELG N D + + L ++ + H +KEL +L + P Y+ YL
Sbjct: 268 TIQEELGGNSPDLE-IEDLRKRATKKKWAKEVGDHFKKELEKLARTNPAAADYSVQINYL 326
Query: 286 ELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCF 345
EL+ DLPW + +++ + DLK A++ LD DH+GL +VKQRIIEYLAV KLK + + P+LC
Sbjct: 327 ELLLDLPWNEFTKD-NFDLKRAQKVLDKDHFGLDKVKQRIIEYLAVLKLKHNMKAPILCL 385
Query: 346 VGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVG 405
VGPPGVGKTSL SIA ALGRK++R++LGG++DEA+IRGHR+TYIG+MPGR+I LK+ G
Sbjct: 386 VGPPGVGKTSLGKSIAKALGRKYVRMALGGIRDEAEIRGHRKTYIGAMPGRIISSLKKAG 445
Query: 406 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 465
NPV +LDEIDK G+D RGDP+SALLEVLDPEQN TF DHY+ + FDLS V+F+ATAN
Sbjct: 446 AANPVFILDEIDKVGNDFRGDPSSALLEVLDPEQNSTFYDHYVEMDFDLSNVMFIATANS 505
Query: 466 AQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQ 525
I P LLDRME+IE+ GYT EEK+ IA +HL+P+ D HGL ++ + + ++++ V++
Sbjct: 506 LSTIQPALLDRMEIIEVNGYTIEEKIEIAKQHLVPKQRDAHGLKTKDVTLKNSVLEKVVE 565
Query: 526 RYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEV 584
YTRE+GVR LE+ + +L R A +A +E L S +DV R LG+P+ D
Sbjct: 566 DYTRESGVRALEKKIGSLVRGIAKNIAMEEAYNPLVSKEDVERILGAPIFD--------- 616
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
++ E + G+ GL W
Sbjct: 617 ------------------------------------------KDQYENNDSAGVVTGLAW 634
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GG++ F+EA+ GKG L LTG LGDV+KESA IAL ++RA A + L
Sbjct: 635 TQVGGDILFIEASLSPGKGRLTLTGSLGDVMKESATIALAYLRAHAAYFNI----DQKLF 690
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
+ DIHIH PAGA PKDGPSAGVT++TAL S F+++RV++ AMTGE+TLRG VLPVGG+
Sbjct: 691 EQWDIHIHVPAGATPKDGPSAGVTMLTALTSAFTQRRVKSHLAMTGEITLRGKVLPVGGI 750
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K+KILAA R IK +IL + N KD++E+ + ++ + M +V+E A
Sbjct: 751 KEKILAAKRANIKEIILCKSNEKDILEIKEDYIKDMQFHYVREMREVIELAL 802
>gi|37527727|ref|NP_931072.1| DNA-binding ATP-dependent protease La [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|36787163|emb|CAE16239.1| endopeptidase La, DNA-binding, ATP-dependent protease; heat shock
K-protein [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 784
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 327/759 (43%), Positives = 456/759 (60%), Gaps = 85/759 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + L+ G +++A L+ + E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLKRARITTLTDNGEHFSAHAEYLDSPIVDEREQEVMIRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + +E K LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLHSVEDAAK----------------LADTIAAHMPLKLSDKQTVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVVERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ L+RK+++A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYETLKRKIEAAKMPKEAREKAEAELQKLKMMSPMSAEATVVRSYIDWMVQVPW-V 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD+DHYGL RVK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLVKAQETLDTDHYGLERVKERILEYLAVQSRISKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMSKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMKIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+I L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEIIRLSGYTEDEKLNIAKRHLLPKQIERNALKKNELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R K V L L+D L
Sbjct: 544 LEREISKLCR------------------KTVKTL---LMDKNLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG R D A R+ G GL WT GG++
Sbjct: 568 ------------IEINSDNLKDYLGVQRVDYGRADTENRI---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKLGI----NSDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
GIK V++PE N +DL E+P ++A L+I KR+EDVL
Sbjct: 729 GGIKTVLIPEENKRDLEEIPQNIVADLQIHPVKRIEDVL 767
>gi|386020703|ref|YP_005938727.1| ATP-dependent protease [Pseudomonas stutzeri DSM 4166]
gi|327480675|gb|AEA83985.1| ATP-dependent protease [Pseudomonas stutzeri DSM 4166]
Length = 798
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 337/774 (43%), Positives = 467/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R ++ + A +S +E
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGVIERFVEVDDHCRAEVSLIE-------- 114
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
E D D +R+ + L+S EQ + G + +VL I +L D A
Sbjct: 115 -EADVD----ARESEVFTRSLLSQFEQYVQLGKKVPAEVLSSLSSIDEPARLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQQILEITDLPARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+ + + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDIDEGHNEVDELKKRIENAGLSKDAYAKAQAELNKLKQMSPMSAEATVVRT 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
Y++ + ++PW KA+ ++ LDL A+E LD+DHYGL VK RI+EYLAV+K +GPVL
Sbjct: 290 YIDWLVNVPW-KAASKVRLDLAKAEEVLDADHYGLEEVKDRILEYLAVQKRVKKLKGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA + RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIARSTNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ TA
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTA 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IP PLLDRMEVI LPGYT +EK+ IA R+L P+ ++ +GL + L+ EA ++ +
Sbjct: 469 N-SMNIPAPLLDRMEVIRLPGYTEDEKVNIATRYLAPKQIEANGLKTGELEFQEAAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR+LER LA + R KV ++
Sbjct: 528 IRYYTREAGVRSLERQLAKVCR----KVVKE----------------------------- 554
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
H F +T VD LE LG +F AE+ G GL
Sbjct: 555 ------------HAAEKRFHVT----VDADSLEHFLGVRKF-RYGLAEQQDQVGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG L TG LG+V+ ES ALT VR+RA L + A +
Sbjct: 598 WTQVGGELLTIEAAVVPGKGRLTKTGSLGEVMGESITAALTVVRSRAVSLGIAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ +DIHIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKQDIHIHVPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N +DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENQRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|383761182|ref|YP_005440164.1| ATP-dependent protease La [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381381450|dbj|BAL98266.1| ATP-dependent protease La [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 858
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 326/783 (41%), Positives = 463/783 (59%), Gaps = 84/783 (10%)
Query: 54 ALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP 113
A + R ++ P G T ++++GL R + E + Y ARI L E VE+
Sbjct: 100 AAQVHRVLKTPDG--TMRLLVQGLERIRLLEFTQEKPYLRARIEILP------ESVEEGL 151
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
+ AL R + LI + + Q T + + +LA + +S + E+ +
Sbjct: 152 EMEALMRAVQDLFRRLIEL--EPQMPDELTIMSINVEDARQLAYLVASSMRLKIEDAQAI 209
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L+ ++ +L + +L+ + ++ + + KI + +G++ + Q+EF LR+QMRAI++ELG+
Sbjct: 210 LEMDQVRNKLLRLIQLLKKEIEVLELGRKIQSEAQGEMERMQREFFLREQMRAIQKELGE 269
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
D+ D+ LE ++ +AGM + EL R+++M Q Y+ + YL+L+ LPW
Sbjct: 270 EDEQTADIRELEERIAAAGMSEEAEREALHELARMRRMPIQAAEYSVIKTYLDLLVSLPW 329
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDAR-------------- 339
A+ + +LD+ A++ LD DHYGL +K+RI+E+LAVRKL+ + R
Sbjct: 330 RNATVD-NLDISHARKVLDEDHYGLTEIKERILEFLAVRKLRAERRRNQKEEQEDLRDKI 388
Query: 340 -----GPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
G VLCFVGPPGVGKTSL SIA A+ RKF+R++LGGV+DEADIRG RRTYIG+MP
Sbjct: 389 RREREGLVLCFVGPPGVGKTSLGLSIARAMNRKFVRLALGGVRDEADIRGFRRTYIGAMP 448
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
GR+I L+RV NPV +LDE+DK G D RGDP+SALLEVLDPEQN+ F DHYL+V FDL
Sbjct: 449 GRIIQSLRRVESRNPVFMLDEVDKLGRDFRGDPSSALLEVLDPEQNREFRDHYLDVAFDL 508
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
S+V+F+ TAN IPP L DRME+I+L YT +EK+ IA +L+PR + ++GL ++
Sbjct: 509 SQVLFITTANVLDTIPPALRDRMEIIQLSSYTEDEKVNIAKGYLVPRQIKENGLRPSEVK 568
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALP-SSKDVHRLGSPL 573
+ ++ +IQ YTREAGVRNLER + + R A +A E ++ +KDV
Sbjct: 569 FTDDALREIIQGYTREAGVRNLERQIGKVCRKIAAGIAAGEIKRGRTVKAKDV------- 621
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
+T+ LG R+ D E ER+
Sbjct: 622 --------------------ATY----------------------LGKRRYFDEEIDERL 639
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
PG+++GLVWT GG++ F EAT M G LTGQLGDV+KESAQ AL++VR+RA L
Sbjct: 640 ENPGVAIGLVWTEAGGDITFFEATRMPGAKGYILTGQLGDVMKESAQAALSYVRSRAESL 699
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ + DIH+H P GA+PKDGPSAG+T+ TAL SL + + VR MTGE+T
Sbjct: 700 GI----DPDFFTHSDIHLHIPEGAIPKDGPSAGITMATALASLLTNRPVRPKLGMTGEIT 755
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLPVGGVK+K+LAA RYG+ VILP RN DL E+P AV ++ IL +++VL
Sbjct: 756 LRGKVLPVGGVKEKVLAAARYGLDTVILPRRNDSDLDELPEAVRKQMKFILVDTVDEVLA 815
Query: 814 QAF 816
A
Sbjct: 816 AAL 818
>gi|407796093|ref|ZP_11143049.1| ATP-dependent protease La 1 [Salimicrobium sp. MJ3]
gi|407019447|gb|EKE32163.1| ATP-dependent protease La 1 [Salimicrobium sp. MJ3]
Length = 775
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 320/770 (41%), Positives = 471/770 (61%), Gaps = 89/770 (11%)
Query: 61 VEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-----------MTKIEMEQV 109
V+ P+G T+ V++EG+ R V+E+ + ++ +++L+ +T+ MEQ
Sbjct: 77 VKLPNG--THRVLVEGVERAKVKEIKEKEEHFETTVTALQEVQGDRNEEEALTRTLMEQF 134
Query: 110 EQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEE 169
EQ ++ +S++ + ++ ++ P H LAD+ + I +E
Sbjct: 135 EQ---YVKISKKVTKETYDTLADIDD---------------PSH-LADMVASHLPIKIKE 175
Query: 170 QLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKE 229
+ +L++ ++K RL + +++ + +++ +KI Q+V+ + +QKE+ LR+QM+AI+
Sbjct: 176 KQGVLETSEVKERLKRVIDIIGNEREVLQIEQKIGQRVKKSMENTQKEYYLREQMKAIQN 235
Query: 230 ELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELI 288
ELGD D ++ L+ K+++A MP I KEL R +K+ PQ +S R Y+E +
Sbjct: 236 ELGDKDGKSGEVAELKEKIENANMPERIELVALKELGRYEKV-PQSSAESSVIRNYIEWL 294
Query: 289 ADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGP 348
LPW +E+ +LD+ A+E L+ DHYGL +VK+RI+EYLAV++L +GP+LC VGP
Sbjct: 295 VVLPWTTETED-NLDVPHAEEILEEDHYGLDKVKERILEYLAVQQLTQSIKGPILCLVGP 353
Query: 349 PGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCN 408
PGVGKTSLA SIA A+ RKF+RIS+GG++DEA++RGHRRTYIG+MPGR+I G+KR N
Sbjct: 354 PGVGKTSLAKSIARAINRKFVRISVGGIRDEAEVRGHRRTYIGAMPGRIIQGMKRAETVN 413
Query: 409 PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQP 468
PV LLDEIDK SD RGDP+SA+LEVLDPEQN TF+DHY+ +DLS V+FVATAN
Sbjct: 414 PVFLLDEIDKMASDFRGDPSSAMLEVLDPEQNATFSDHYIEEDYDLSNVLFVATANTMST 473
Query: 469 IPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYT 528
IP PL+DRMEVI++ GYT EKL IA HL+ + + ++GL LQ + + +I+RYT
Sbjct: 474 IPGPLMDRMEVIQIAGYTEVEKLHIAKEHLLGKQITENGLTRNQLQFRDDALMKLIRRYT 533
Query: 529 REAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEV 588
REAGVR LER +A + R AA ++
Sbjct: 534 REAGVRGLEREIANVCRKAA--------------------------------------KI 555
Query: 589 IPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFG 648
I GE ++V E M+E+++G P+F +A E G + GL +T G
Sbjct: 556 IVSGEKKR-----------VIVTEKMIEELIGRPKFRYGQA-ELEDQVGAATGLAYTAAG 603
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
G+ +E + GKG L LTG+LGDV+KESAQ A +++R RA +L + + + ++ D
Sbjct: 604 GDTLSIEVSVSPGKGNLTLTGKLGDVMKESAQAAFSYIRTRADELNISS----DFVEKND 659
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
IHIH P GA PKDGPSAG+T+ TALVS + + V + MTGE+TLRG VLP+GG+K K
Sbjct: 660 IHIHVPEGATPKDGPSAGITMATALVSALTGRAVSKEVGMTGEITLRGRVLPIGGLKQKA 719
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
L+AHR G+ R+I+P N KDL ++P +V L I K +++VLEQA G
Sbjct: 720 LSAHRAGLTRIIIPFENKKDLDDIPESVRNDLTFIPVKHLDEVLEQALTG 769
>gi|294666560|ref|ZP_06731801.1| ATP-dependent serine proteinase La [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603704|gb|EFF47114.1| ATP-dependent serine proteinase La [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 823
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 334/774 (43%), Positives = 476/774 (61%), Gaps = 63/774 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 72 GTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGQGTEIEASD----- 121
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFVASF 163
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD A
Sbjct: 122 -AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIAAHI 174
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L +Q
Sbjct: 175 GVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYLNEQ 234
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P R
Sbjct: 235 MKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAVVRN 294
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +GP+L
Sbjct: 295 YLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQMKGPIL 353
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL+ L +
Sbjct: 354 CLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQNLNK 413
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V+FVAT+
Sbjct: 414 VGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEVMFVATS 473
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E ++I ++ +
Sbjct: 474 NSPN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIKANGLKPEEIEIASDAIQDI 532
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 533 VRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG--- 564
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
P + V+ + + + V+ L+K LG RFD A E G+ GL
Sbjct: 565 ------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-GLVTGLA 617
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L + ++
Sbjct: 618 WTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----DVDF 673
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ +R +RAD AMTGE+TLRG V +GG
Sbjct: 674 LQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSILTRVPIRADVAMTGEITLRGRVSAIGG 733
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAA R GI+ V++P+ N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 734 LKEKLLAALRGGIRTVLIPDENRKDLADIPPNVTRDLKIVPVKWIDEVLDLALE 787
>gi|395214128|ref|ZP_10400429.1| ATP-dependent protease la [Pontibacter sp. BAB1700]
gi|394456442|gb|EJF10744.1| ATP-dependent protease la [Pontibacter sp. BAB1700]
Length = 828
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 309/754 (40%), Positives = 462/754 (61%), Gaps = 66/754 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T ++++G RF + E++ Y +A++S + T + E AL K
Sbjct: 119 PDGNTT--IIIQGQSRFKIDEVTQEDPYLSAKVSYCKDTFPNKKSKE----VKALVHSLK 172
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FEISFEEQLVMLDSVDLKVR 182
A +++ + + +V L+ + F++S + ++ +L+ D R
Sbjct: 173 DAAAKMLKL---NPEIPQEAQVALDNIDSPSFLTHFLSSNLNVDVAQKQKLLEVNDGVER 229
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
++ E++ R +Q + + ++I KV + + Q+++ LRQQ++ +++ELG D++
Sbjct: 230 GTQLLEIMLREIQLLELKQEIHTKVHTDIDQQQRDYFLRQQIKVLQDELGQEGPDQEIER 289
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
ER M+ P I KH KE+ RL ++ PQ Y + YLE + DLPW++ +++ +
Sbjct: 290 FRERAMKKK-WPEQIAKHFNKEIERLARLNPQAAEYPVAVNYLEFLLDLPWDETTKD-NF 347
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
+LK K+ LD+DHYGL +VK+RIIEYLAV KLK D + P+LC GPPGVGKTSL SIA+
Sbjct: 348 NLKRTKKILDADHYGLEKVKERIIEYLAVLKLKKDMKAPILCLYGPPGVGKTSLGRSIAT 407
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
ALGRK++R+SLGGV+DEA+IRGHRRTY+G+MPG++I +K+VG NPV++LDEIDK SD
Sbjct: 408 ALGRKYVRMSLGGVRDEAEIRGHRRTYVGAMPGKIISQIKKVGSSNPVIILDEIDKLASD 467
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
RGDP+SALLEVLDPEQN TF D+YL+V +DLSKV+F+ATAN I P L DRME+IEL
Sbjct: 468 FRGDPSSALLEVLDPEQNHTFMDNYLDVEYDLSKVLFIATANSLDTIQPALRDRMEIIEL 527
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GYT EEK IA RHL+P+ + +HGL E +++ +A ++ VI YTRE+GVR+LER +
Sbjct: 528 TGYTLEEKTEIAKRHLVPKQVKEHGLEEEDVKMSKATIQKVIDDYTRESGVRSLERKIGQ 587
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
+ R A + A +E+ DV ++
Sbjct: 588 VIRNTAKQKAMEEEYTPSIKPDDVVKI--------------------------------- 614
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
LGP F D+E + + G+ GL WT+ GG++ F+E+ +GK
Sbjct: 615 ----------------LGPETF-DKEIYQDIDTAGVVTGLAWTSVGGDILFIESILSKGK 657
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
G+L L+GQLGDV+KESA A+++++A A L++ L D+HIHFP GAVPKDG
Sbjct: 658 GKLTLSGQLGDVMKESAMTAISYLKAHAELLEI----DYRLFDQYDLHIHFPEGAVPKDG 713
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAG+ + T++ S+F++++V++ AMTGE+TLRG VLPVGG+K+KILAA R GI +IL
Sbjct: 714 PSAGIAIFTSIASVFTQRKVKSRLAMTGEITLRGKVLPVGGIKEKILAAKRAGITDIILC 773
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
++N KD+ E+P + L I R+++V++ A
Sbjct: 774 QKNRKDISEIPEQYIKGLHIHYVDRVDEVVQIAL 807
>gi|325927443|ref|ZP_08188690.1| ATP-dependent proteinase [Xanthomonas perforans 91-118]
gi|325542193|gb|EGD13688.1| ATP-dependent proteinase [Xanthomonas perforans 91-118]
Length = 823
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 334/777 (42%), Positives = 477/777 (61%), Gaps = 63/777 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 69 YTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGQGTEIEASD-- 121
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 122 ----AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL+
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V+FV
Sbjct: 411 LNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E ++I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIKANGLKPEEIEIASDAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 530 QDIVRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
P + V+ + + + V+ L+K LG RFD A E G+
Sbjct: 565 ---------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-GLVT 614
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 615 GLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----D 670
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ +R +RAD AMTGE+TLRG V
Sbjct: 671 VDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSILTRVPIRADVAMTGEITLRGRVSA 730
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI+ V++P+ N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 731 IGGLKEKLLAALRGGIRTVLIPDENRKDLADIPPNVTRDLKIVPVKWIDEVLDLALE 787
>gi|386012906|ref|YP_005931183.1| hypothetical protein PPUBIRD1_3383 [Pseudomonas putida BIRD-1]
gi|313499612|gb|ADR60978.1| Lon [Pseudomonas putida BIRD-1]
Length = 798
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 467/777 (60%), Gaps = 85/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ S + A +S ++ T +
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFSEVDGHIRAEVSLIDETDTAERE 122
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q ++ L ++ A E++S L + G +L D
Sbjct: 123 SEVFVRTLLSQFEQYVQLGKKVPA---EVLSSLNSIDEPG-------------RLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIVDLTTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW KA ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYLDWLVQVPW-KAQSKVRLDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L+P+ + +GL E L++ + +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKEELEVDVSAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R + Q+Q + +S+
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKVVKEHTGQKQVKVKVASE---------------- 568
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
LE +LG +F AE+ G
Sbjct: 569 ---------------------------------QLEHLLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|158321196|ref|YP_001513703.1| ATP-dependent protease La [Alkaliphilus oremlandii OhILAs]
gi|158141395|gb|ABW19707.1| ATP-dependent protease La [Alkaliphilus oremlandii OhILAs]
Length = 779
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 319/754 (42%), Positives = 461/754 (61%), Gaps = 67/754 (8%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T V++EG+ R + L YY + +E ++E VE++ + AL R E
Sbjct: 89 TIRVLVEGIARAKIVNLVQESPYY---LVDVEEQNYQLE-VEKNKEVDALMRSVLDAFEE 144
Query: 129 LISVLEQKQKTGGRTKVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSK 185
I V + ++LL I +LAD ++ + + +L+ D K+RL
Sbjct: 145 YIDVSNKVS-----PEILLNISEIDMPGRLADTIASNLLLKPAAKQEILNEFDPKLRLET 199
Query: 186 ATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALE 245
++ ++ + + +KI +V+ Q++K QKE LR+Q++AI++ELGD++D +++ +
Sbjct: 200 LYRILLEEVEILEIEQKINNRVKNQINKMQKEHYLREQLKAIQKELGDDEDLVEEIDEYK 259
Query: 246 RKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLK 305
+K++ P +I + V++E+ RL ++ P R Y++ I LPW+ +++ LDLK
Sbjct: 260 QKLEKIKFPKDIKEKVEREIDRLMRLSPSSAETGVIRSYIDWILSLPWDTETKD-KLDLK 318
Query: 306 AAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALG 365
+ E LD DHYGL +VK+RI+EYLA+R+L +GP+LC VGPPGVGKTS+A SIA +L
Sbjct: 319 KSAEILDEDHYGLEKVKERILEYLAIRQLSKSMKGPILCLVGPPGVGKTSIAKSIARSLN 378
Query: 366 RKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRG 425
RKF+R+SLGGV+DEA+IRGHRRTY+G++PGR+I +++ G NPV L DEIDK SD RG
Sbjct: 379 RKFVRMSLGGVRDEAEIRGHRRTYVGAIPGRIISSIRQSGSKNPVFLFDEIDKLASDFRG 438
Query: 426 DPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGY 485
DPASALLEVLDPEQN +F DHYL +PF+LSK++F+ TAN IP PLLDRMEVI + GY
Sbjct: 439 DPASALLEVLDPEQNNSFTDHYLEIPFNLSKIMFITTANSLDTIPGPLLDRMEVIRIAGY 498
Query: 486 TPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALAR 545
T EEK I ++L+P+ + +HGL E LQI E ++ VI YTRE+GVRNLER +A + R
Sbjct: 499 TEEEKYNITQKYLLPKQIKEHGLKPENLQISEKAIRDVINYYTRESGVRNLERQIANICR 558
Query: 546 AAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
KVA++ E+ L T RI
Sbjct: 559 ----KVAKRVVEEKL---------------------------------------TTVRIA 575
Query: 606 SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGEL 665
L K LG P + E A + GI GL WT GG+ +E T M+G G+L
Sbjct: 576 P------NNLGKYLGNPVYR-YEMANQKDEVGIVRGLAWTQVGGDTLSIEVTLMKGDGKL 628
Query: 666 HLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSA 725
LTG+LGDV+KESA+ ++++R+RA +L++ + L DIHIH P GA+PKDGPSA
Sbjct: 629 VLTGRLGDVMKESARAGISYIRSRAEELKIDPDFHKTL----DIHIHIPEGAIPKDGPSA 684
Query: 726 GVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERN 785
G+T+ TA++S + V D AMTGE+TLRG VL +GG+K+K+LAA+R GIK++I+P N
Sbjct: 685 GITMATAVISALTNTPVYKDVAMTGEITLRGRVLAIGGLKEKVLAANRAGIKKIIIPMDN 744
Query: 786 LKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
+DL E+P V LE ++A+ M+ VLE A +G
Sbjct: 745 KRDLDEIPDNVKRKLEFVIAENMDQVLEHALKGA 778
>gi|336249038|ref|YP_004592748.1| DNA-binding ATP-dependent protease La [Enterobacter aerogenes KCTC
2190]
gi|444352818|ref|YP_007388962.1| ATP-dependent protease La (EC 3.4.21.53) Type I [Enterobacter
aerogenes EA1509E]
gi|334735094|gb|AEG97469.1| DNA-binding ATP-dependent protease La [Enterobacter aerogenes KCTC
2190]
gi|443903648|emb|CCG31422.1| ATP-dependent protease La (EC 3.4.21.53) Type I [Enterobacter
aerogenes EA1509E]
Length = 784
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 330/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITALSDNGEHFSAKAEYLASPVIEEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ GE+
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GENL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGTAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I +R+E+VL A +
Sbjct: 727 HRGGIKTVLIPYENKRDLEEIPENVIADLDIHPVQRIEEVLTLALQN 773
>gi|358640088|dbj|BAL27384.1| ATP-dependent protease La [Azoarcus sp. KH32C]
Length = 816
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 325/759 (42%), Positives = 458/759 (60%), Gaps = 72/759 (9%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R V P G + +V++G RF V + + AR++ +E Q P+ A
Sbjct: 113 RYVTGPEG--AHHLVVQGQSRFRVLQFLEGWPFLVARVAMVE------PQPAAGPEIEAR 164
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
Q + A+E I++L V+ + LAD+ ++ EE+ +L++ D
Sbjct: 165 FLQLREQALEAIALLPDLPDA--LANVVRDIDSPDALADLVANILDVKNEEKQDLLETFD 222
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L RL K L+ ++ ++++++I K + + Q+E +LR+Q+R I++ELG++ +
Sbjct: 223 LMRRLDKVIALLSARVEVLKLSKEIGDKTRAEFDERQRESVLREQLRQIQKELGEDQESA 282
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
++ AL++ + +AGMP ++ KH +KEL+RL++M Y R YLE + +LPW K
Sbjct: 283 AEVEALQKAIATAGMPEDVLKHAEKELKRLQRMGEGGGEYAMLRTYLEWLTELPW-KLEP 341
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ +D+ A+ LD+DH+GL +VK+RI+EYLAVRKL P+ + P+LCFVGPPGVGKTSL
Sbjct: 342 QLPIDIGEARRVLDADHFGLDKVKRRILEYLAVRKLNPEGKSPILCFVGPPGVGKTSLGQ 401
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A GR F R++LGGV DEA+IRGHRRTYIG++PG +I L+R G N V++ DEIDK
Sbjct: 402 SIARATGRAFQRVALGGVHDEAEIRGHRRTYIGALPGNVIQVLRRAGTTNTVLMFDEIDK 461
Query: 419 TGS-DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRM 477
G+ GDPASALLEVLDPEQN F D+YL V FDLS+V+F+ TAN IP PL DRM
Sbjct: 462 LGAGGFHGDPASALLEVLDPEQNNKFRDNYLGVDFDLSRVMFICTANVLDSIPGPLRDRM 521
Query: 478 EVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLE 537
EVIELPGYT EEK+ IA R+L+ R + +GL ++ + +A + +++ YTREAGVRNLE
Sbjct: 522 EVIELPGYTEEEKVEIARRYLVQRQREANGLKTDQASLTDAALAAIVRDYTREAGVRNLE 581
Query: 538 RNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHE 597
R + A R A+++AE + +
Sbjct: 582 REIGATLRHLAMQIAEGQAQ---------------------------------------- 601
Query: 598 VSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEAT 657
R+T VD L +LG RF+ E A R + PG++ GL WT GG++ F+EA+
Sbjct: 602 -----RVT----VDAPDLPAILGARRFES-ELALRTSVPGVATGLAWTPVGGDILFIEAS 651
Query: 658 AMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGA 717
+ G G L LTGQLGDV+KESAQ ALT + D L D+H+H PAGA
Sbjct: 652 KVPGSGRLILTGQLGDVMKESAQAALTLAKIWTGD----------ALDKVDLHVHVPAGA 701
Query: 718 VPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIK 777
PKDGPSAGV + AL+SL + K VR+D AMTGE++LRGLVLP+GGVK+K LAA R GI+
Sbjct: 702 TPKDGPSAGVAMFVALLSLLTGKPVRSDVAMTGEISLRGLVLPIGGVKEKTLAALRAGIR 761
Query: 778 RVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
V+LP RN KDL +VPA LE + +R+ED + A
Sbjct: 762 TVMLPRRNEKDLEDVPAEAREKLEFVWLERVEDAVRCAI 800
>gi|335424991|ref|ZP_08553982.1| Lon-A peptidase [Salinisphaera shabanensis E1L3A]
gi|334886667|gb|EGM25014.1| Lon-A peptidase [Salinisphaera shabanensis E1L3A]
Length = 795
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 304/665 (45%), Positives = 419/665 (63%), Gaps = 55/665 (8%)
Query: 152 IHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQL 211
I +LAD A + EE+ +L+ D + RL D ++ +++ +KI +V+ Q+
Sbjct: 158 IGRLADTIAAHLNLKLEERQDVLEIADAQARLEHIVAKTDAEIEVLQIEKKIRGRVKQQM 217
Query: 212 SKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKM 271
+SQ+E+ L +QM+AI++ELG+ DD +DL LE K++ GMP + K E +LK M
Sbjct: 218 ERSQREYYLNEQMKAIQKELGEIDDAPNDLDELEEKIEKVGMPKEVKKKATTEFNKLKSM 277
Query: 272 QPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAV 331
P T R YL+ + D+PW+K S+ +DLK A++ LD+DHYGL RVK+RIIE LAV
Sbjct: 278 SPMSAEATVVRNYLDWLVDVPWKKRSK-TKIDLKTAQDTLDADHYGLERVKERIIENLAV 336
Query: 332 RKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIG 391
+ +GP+LC VGPPGVGKTSL SIA A R+F+R+SLGGV+DEA+IRGHRRTYIG
Sbjct: 337 QSRVKKIKGPILCLVGPPGVGKTSLGRSIAKATNREFVRMSLGGVRDEAEIRGHRRTYIG 396
Query: 392 SMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP 451
S+PG++I + +VGV NP+ LLDE+DK D RGDPASALLEVLDPEQN TF DHYL V
Sbjct: 397 SLPGKIIQNMAKVGVRNPLFLLDEVDKMAQDFRGDPASALLEVLDPEQNNTFGDHYLEVD 456
Query: 452 FDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSE 511
+DLS+V+FV TAN IPP LLDRMEVI L GYT +EK+ IA R+L+P+ + ++GL E
Sbjct: 457 YDLSQVMFVCTANTLN-IPPALLDRMEVIRLSGYTEDEKVNIAERYLVPKAMKENGLKDE 515
Query: 512 FLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGS 571
L I + + VI+RYTREAGVRNLER+++ + R ++ E++ ++ SK
Sbjct: 516 ELAISDNALTDVIRRYTREAGVRNLERDISKICRKVVKELISHEKDGSVQVSK------- 568
Query: 572 PLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAE 631
L+K LG P+F AE
Sbjct: 569 -----------------------------------------RNLDKYLGVPKF-RYGRAE 586
Query: 632 RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
G GL WT GGE+ +E+ A+ GKG+ TG LGDV++ES Q ALT +R+RA
Sbjct: 587 ETDGVGQVTGLAWTEVGGELLSIESAAVPGKGKPLHTGSLGDVMQESIQAALTVIRSRAA 646
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
L + + +Q D+H+H P GA PKDGPSAG+ + T+++S ++ VRAD AMTGE
Sbjct: 647 TLGI----ERDFMQKSDLHVHVPEGATPKDGPSAGIGMCTSMISALTQIPVRADVAMTGE 702
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+K+K+LAAHR GIK V++P N KDL E+P + L+I +++++V
Sbjct: 703 ITLRGDVLPIGGLKEKLLAAHRGGIKIVVIPHENTKDLAEIPPNIKNRLDIRPVRKIDEV 762
Query: 812 LEQAF 816
LE A
Sbjct: 763 LEIAL 767
>gi|403379303|ref|ZP_10921360.1| ATP-dependent protease La [Paenibacillus sp. JC66]
Length = 795
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 314/753 (41%), Positives = 454/753 (60%), Gaps = 65/753 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EG+ R + E YY I L EQ+ DP+ AL R
Sbjct: 83 PNG--TIRVLVEGIIRAEILEYKDTAEYYEVEIKELP------EQLVPDPEIDALMRTVL 134
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
I++ K+ T + + +LAD+ + + +++ +L++V+++ RL
Sbjct: 135 TQFEHYINL--SKKVTPETLAAVSDIEEPGRLADVICSHLSLKIKDKQEILETVNVRARL 192
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K ++++ + + + KI+Q+V+ Q+ K+QKE+ LR+QM+AI++ELGD + ++
Sbjct: 193 EKLLDILNNEREVLELERKISQRVKKQMEKTQKEYYLREQMKAIQKELGDKEGRAGEVEE 252
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L ++ A +P + V KE+ RL+KM R Y++ + LPW K SE+ DLD
Sbjct: 253 LRAQLAEAELPEKAHERVLKEIDRLEKMPATSAEGGVIRNYIDWLLALPWSKQSED-DLD 311
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L A++ L DH+ L + K+R++EYLAV+ L +GP+LC VGPPGVGKTS+A SI+ A
Sbjct: 312 LDHAEQILHEDHFALEKPKERVLEYLAVQNLVKKMKGPILCLVGPPGVGKTSIARSISRA 371
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
LGR+F+R+SLGGV+DEA+IRGHRRTY+G+MPGR+I GLK G NPV LLDEIDK D
Sbjct: 372 LGRQFVRVSLGGVRDEAEIRGHRRTYVGAMPGRIIQGLKTAGSNNPVFLLDEIDKMAMDF 431
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDPASALLEVLDPEQN TF+DHY+ +PFDLS V+FV TAN A IP PLLDRME++ +P
Sbjct: 432 RGDPASALLEVLDPEQNSTFSDHYIELPFDLSNVMFVTTANSAHNIPRPLLDRMELLYIP 491
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK IA +L+P+ +HGL L++ + + +I+RYTREAGVRNLE+ +A+L
Sbjct: 492 GYTELEKREIARHYLLPKQESEHGLKEGQLELEDEALATIIRRYTREAGVRNLEQQIASL 551
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R +A K+ ++
Sbjct: 552 CRKSAKKIVSEQ------------------------------------------------ 563
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+ + +++ L+ LGP +F AE G GL WT GG+ +E + + G G
Sbjct: 564 -LTKVEINQENLKDFLGPAKF-RYGMAEVEDQIGTVSGLAWTEAGGDTLVIEVSIVPGSG 621
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A ++ R++A +L + A + + DIHIH P GA+PKDGP
Sbjct: 622 KLTLTGKLGDVMKESAQAAFSYTRSKARELGIAA----DFHEKNDIHIHIPEGAIPKDGP 677
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + AMTGE+TLRG VLP+GG+K+K LAAHR GIK+++LP+
Sbjct: 678 SAGITMATALISALTEIPVSREVAMTGEITLRGRVLPIGGLKEKSLAAHRAGIKKILLPK 737
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N KD+ ++P +V L I M+ VLE A
Sbjct: 738 DNEKDIQDIPESVRDELTFIPVSHMDQVLEHAL 770
>gi|294627915|ref|ZP_06706494.1| ATP-dependent serine proteinase La [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292597829|gb|EFF41987.1| ATP-dependent serine proteinase La [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 823
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 334/774 (43%), Positives = 476/774 (61%), Gaps = 63/774 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 72 GTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGQGTEIEASD----- 121
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFVASF 163
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD A
Sbjct: 122 -AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIAAHI 174
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L +Q
Sbjct: 175 GVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYLNEQ 234
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P R
Sbjct: 235 MKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAVVRN 294
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +GP+L
Sbjct: 295 YLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQMKGPIL 353
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL+ L +
Sbjct: 354 CLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQNLNK 413
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V+FVAT+
Sbjct: 414 VGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEVMFVATS 473
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E ++I ++ +
Sbjct: 474 NSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIKANGLKPEEIEIASDAIQDI 532
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 533 VRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG--- 564
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
P + V+ + + + V+ L+K LG RFD A E G+ GL
Sbjct: 565 ------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-GLVTGLA 617
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L + ++
Sbjct: 618 WTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----DVDF 673
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ +R +RAD AMTGE+TLRG V +GG
Sbjct: 674 LQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSILTRVPIRADVAMTGEITLRGRVSAIGG 733
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAA R GI+ V++P+ N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 734 LKEKLLAALRGGIRTVLIPDENRKDLADIPPNVTRDLKIVPVKWIDEVLDLALE 787
>gi|329296784|ref|ZP_08254120.1| DNA-binding ATP-dependent protease La [Plautia stali symbiont]
Length = 784
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 331/771 (42%), Positives = 467/771 (60%), Gaps = 90/771 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + L+ G ++ A+ L +IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRAHITTLADNGDHFVAQAEYLISPEIEEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTVAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDINERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP+ + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYEALKRKIDAAKMPAEAREKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ +L+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKNLRKAQETLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKEKEISVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A +AL L D A+ +++ GE+
Sbjct: 544 LERELSKLCRKAV---------KAL-----------------LMDKAKKSIKIT--GEN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
L+ LG RFD ++ RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVLGKGKLAYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VR+D AMTGE+TLRG VLP+GG+KDK+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRSDVAMTGEITLRGQVLPIGGLKDKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
HR GIK V++P+ N +DL E+P V+A L I KR+EDVL A E P+
Sbjct: 727 HRGGIKTVLIPDENKRDLEEIPQNVIADLSIHPVKRIEDVLSLALE-NAPY 776
>gi|429089534|ref|ZP_19152266.1| ATP-dependent protease La Type I [Cronobacter universalis NCTC
9529]
gi|426509337|emb|CCK17378.1| ATP-dependent protease La Type I [Cronobacter universalis NCTC
9529]
Length = 784
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 331/769 (43%), Positives = 466/769 (60%), Gaps = 86/769 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGDHFAAKAEYLESPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLSDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDINERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKENEINVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ GE+
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLK-----RIEIT--GEN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
L+ LG RFD ++ RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + + + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINS----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
GIK V++P+ N +DL ++P V+A L+I KR+E+VL A + P+
Sbjct: 729 GGIKTVLIPDENKRDLEDIPENVIADLDIHPVKRIEEVLTLALQ-NAPY 776
>gi|374319917|ref|YP_005073046.1| ATP-dependent protease La [Paenibacillus terrae HPL-003]
gi|357198926|gb|AET56823.1| ATP-dependent protease La [Paenibacillus terrae HPL-003]
Length = 778
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 317/765 (41%), Positives = 454/765 (59%), Gaps = 89/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPD--------- 114
P+G T V++EGL R + + + YY L E E V + D
Sbjct: 84 PNG--TIRVLVEGLERAEIIQYTDNEEYYEVLAKELH----EAENVHPETDALMRTVLTQ 137
Query: 115 ---FIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQL 171
+I LS++ + +S +E+ GR LAD+ + + +E+
Sbjct: 138 FEHYINLSKKVTPETLAAVSDIEEP----GR------------LADVITSHLTLKIKEKQ 181
Query: 172 VMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL 231
+L+++D+ RL K ++++ + + + KI Q+V+ Q+ K+QKE+ LR+QM+AI++EL
Sbjct: 182 DILETIDVIQRLEKLLDILNNEREVLELERKINQRVKKQMEKTQKEYYLREQMKAIQKEL 241
Query: 232 GDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADL 291
G+ + ++ L ++ +P + + V+KE+ RL+KM R Y++ + L
Sbjct: 242 GEKEGRAGEVEELRNQLSELELPGPVKEKVEKEIDRLEKMPASSAEGGVIRNYVDWLLSL 301
Query: 292 PWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGV 351
PW K +++ DLD+ A+E L+ DHYGL + K+R++EYLAVRKL +GP+LC VGPPGV
Sbjct: 302 PWNKFTDD-DLDIAKAEEVLNDDHYGLDKPKERVLEYLAVRKLVKTIKGPILCLVGPPGV 360
Query: 352 GKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVM 411
GKTSLA SIA ++GR+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV
Sbjct: 361 GKTSLARSIAKSMGREFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGTSNPVF 420
Query: 412 LLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPP 471
LLDEIDK SD RGDP++ALLEVLDPEQN TF+DH++ +PFDLS V+FV TAN A IP
Sbjct: 421 LLDEIDKMASDFRGDPSAALLEVLDPEQNNTFSDHFVELPFDLSNVMFVTTANAAHNIPR 480
Query: 472 PLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREA 531
PL+DRME + +PGYT EKL IA R+L+P+ +HGL E L I E + VI+ YTRE+
Sbjct: 481 PLMDRMETLYIPGYTELEKLEIANRYLLPKQKREHGLEEEQLDIGEDTLLRVIREYTRES 540
Query: 532 GVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPM 591
GVRNLE+ +A+L R AA V G E
Sbjct: 541 GVRNLEQQMASLCRKAAKSV---------------------------VSGGE-------- 565
Query: 592 GESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEV 651
P+ + L+ LG +F AE G GL WT GGE
Sbjct: 566 --------------GPIRITPDNLKDYLGVAKF-RYGVAELEDQIGTVTGLAWTEVGGET 610
Query: 652 QFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHI 711
+E T + G G+L LTG+LGDV+KESAQ A ++ R++A +L + + + DIHI
Sbjct: 611 LMIEVTVVPGSGKLILTGKLGDVMKESAQAAFSYTRSKAVELGIAT----DFYEKNDIHI 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA+PKDGPSAG+T+ TAL+S + + V D AMTGE+TLRG VLP+GG+K+K LAA
Sbjct: 667 HIPEGAIPKDGPSAGITIATALISALTNRHVSKDVAMTGEITLRGRVLPIGGLKEKSLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
HR G K+++LP+ N +DL ++P ++ +E + M+ VL+ A
Sbjct: 727 HRAGYKKILLPKDNERDLKDIPDSIRQDVEFVPVAHMDQVLKHAL 771
>gi|339494038|ref|YP_004714331.1| ATP-dependent protease [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|338801410|gb|AEJ05242.1| ATP-dependent protease [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 798
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 337/774 (43%), Positives = 467/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R ++ L + A +S +E
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGVIERLVEVDDHCRAEVSLIE-------- 114
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
E D D +R+ + L+S EQ + G + +VL I +L D A
Sbjct: 115 -EADVD----ARESEVFTRSLLSQFEQYVQLGKKVPAEVLSSLSSIDEPARLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQQILEITDLPARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+ + + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDIDEGHNEVDELKKRIENAGLSKDAYTKAQAELNKLKQMSPMSAEATVVRT 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
Y++ + ++PW KA+ ++ LDL A+E LD+DHYGL VK RI+EYLAV+K +GPVL
Sbjct: 290 YIDWLVNVPW-KAASKVRLDLAKAEEVLDADHYGLEEVKDRILEYLAVQKRVKKLKGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA + RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIARSTNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ TA
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTA 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IP PLLDRMEVI LPGYT +EK+ IA R+L P+ ++ +GL L+ EA ++ +
Sbjct: 469 N-SMNIPAPLLDRMEVIRLPGYTEDEKVNIATRYLAPKQIEANGLKKGELEFQEAAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR+LER LA + R KV ++
Sbjct: 528 IRYYTREAGVRSLERQLAKVCR----KVVKE----------------------------- 554
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
H F + +VD LE LG +F AE+ G GL
Sbjct: 555 ------------HAAEKRFHV----IVDADSLEHFLGVRKF-RYGLAEQQDQVGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG L TG LG+V+ ES ALT VR+RA L + A +
Sbjct: 598 WTQVGGELLTIEAAVVPGKGRLTKTGSLGEVMGESITAALTVVRSRAVSLGIAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ +DIHIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKQDIHIHVPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N +DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENQRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|429092457|ref|ZP_19155085.1| ATP-dependent protease La Type I [Cronobacter dublinensis 1210]
gi|426742656|emb|CCJ81198.1| ATP-dependent protease La Type I [Cronobacter dublinensis 1210]
Length = 802
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 331/769 (43%), Positives = 463/769 (60%), Gaps = 86/769 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++E L R + LS G ++ A+ LE I E EQ + Q +
Sbjct: 102 PDGTVK--VLVEVLQRARITTLSDNGDHFAAKAEYLESPAIDEREQEVLVRTAISQFEGY 159
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 160 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLSDKQSVLE 203
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 204 MSDINERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 263
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 264 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 322
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 323 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 382
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 383 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 442
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 443 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 501
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L +++ ++ + +I+ YTREAGVR+
Sbjct: 502 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKENEIEVDDSAIIGIIRYYTREAGVRS 561
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 562 LEREISKLCRKAVKQL---------------------LLDKSLK---------------- 584
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
RI ++ L+ LG RFD ++ RV G GL WT GG++
Sbjct: 585 -------RIE----INGDNLKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 630
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + + + RDIH+H
Sbjct: 631 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGI----NSDFYEKRDIHVHV 686
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 687 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 746
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
GIK V++P+ N +DL E+P V+A LEI KR+E+VL A + P+
Sbjct: 747 GGIKTVLIPDENKRDLEEIPENVIADLEIHPVKRIEEVLSLALQNA-PY 794
>gi|407793807|ref|ZP_11140838.1| ATP-dependent Lon protease [Idiomarina xiamenensis 10-D-4]
gi|407213961|gb|EKE83812.1| ATP-dependent Lon protease [Idiomarina xiamenensis 10-D-4]
Length = 784
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 334/765 (43%), Positives = 464/765 (60%), Gaps = 87/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-----------MTKIEMEQVEQD 112
P G V V++EGL R ++ + ++ A + L M + M Q E
Sbjct: 84 PDGTVK--VLVEGLQRAAIDKFEDSDDFFRAELHYLASEALPEQEEDVMVRSAMNQFE-- 139
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
++ L+++ + +S ++ + LAD A + ++
Sbjct: 140 -GYVKLNKKIPPEVLTSLSGIDDADR----------------LADTMAAHMPLKLADKQH 182
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L+ D++ RL L++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI+ ELG
Sbjct: 183 VLEITDVRERLEYLMALMESEIDILQVEKRIRARVKKQMEKSQREYYLNEQMKAIQRELG 242
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
+ +D D+ AL++K++ A MP+ VQ EL++LK M P T R Y++ + +P
Sbjct: 243 EGEDGADEFEALQKKIEDAAMPAEARDKVQAELQKLKMMSPMSAEATVVRGYIDWMVAVP 302
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W+K S I DL A++ LD+DHYGL +VK+RIIEYLAV++ RG +LC VGPPGVG
Sbjct: 303 WKKRSR-IKKDLANAEKILDADHYGLEKVKERIIEYLAVQQRTSKVRGAILCLVGPPGVG 361
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ L
Sbjct: 362 KTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMSKVGVRNPLFL 421
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK +D+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FVAT+N + IP P
Sbjct: 422 LDEIDKMSADMRGDPASALLEVLDPEQNTTFNDHYLEVDYDLSDVMFVATSN-SMNIPAP 480
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
LLDRMEVI L GYT +EKL IA RHL+P+ ++++GL + + + ++ + +I+ YTREAG
Sbjct: 481 LLDRMEVIRLSGYTEDEKLNIAKRHLLPKQIERNGLKRKEITVQDSAIIGIIRYYTREAG 540
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VRNLER L+ L R A + S LLD+ L
Sbjct: 541 VRNLERELSRLCRKA---------------------VKSILLDSEL-------------- 565
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
N IT DE L LG RF D AE G GL WT GG++
Sbjct: 566 -------NHVEIT-----DEN-LSDFLGVQRF-DYGKAEESNQIGQVTGLAWTEVGGDLL 611
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
+EAT + GKG++ TG LGDV++ES Q ALT VR+RA L +AED + RDIH+H
Sbjct: 612 TIEATNVAGKGKITSTGSLGDVMQESIQTALTVVRSRADKLG-IAED---FHEKRDIHVH 667
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
P GA PKDGPSAG+ +VTALVS F++ VR+D AMTGE+TLRG VL +GG+K+K+LAAH
Sbjct: 668 VPEGATPKDGPSAGIAMVTALVSSFTQIPVRSDVAMTGEITLRGEVLAIGGLKEKLLAAH 727
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
R GIK V++P+ N +DL E+ V L I + +++VL+ A E
Sbjct: 728 RGGIKHVLIPKDNERDLKEIADNVKRDLTIQPVQWIDEVLKVALE 772
>gi|392307871|ref|ZP_10270405.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Pseudoalteromonas citrea NCIMB 1889]
Length = 785
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 329/781 (42%), Positives = 467/781 (59%), Gaps = 88/781 (11%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R ++E Y+ A+ +E IE
Sbjct: 69 YDVGTIATVLQL---LKLPDGTVK--VLVEGTQRAKIEEFIVSDEYFLAQAQFIESQDIE 123
Query: 106 MEQ--------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
++ V Q ++ L+++ + +S +++ + LAD
Sbjct: 124 EQEQDIFIRSAVSQFEGYVKLNKKIPPEVLTSVSGIDEAAR----------------LAD 167
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
A I E+ +L+ + RL L++ + ++V +KI +V+ Q+ KSQ+E
Sbjct: 168 TMAAHMPIKVPEKQKVLELGSVTERLEYLMALMEGEIDLLQVEKKIRSRVKKQMEKSQRE 227
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELG+ DD D+ AL++++ A MP + EL +LK M P
Sbjct: 228 YYLNEQMKAIQKELGELDDVPDEFEALKKRISEAQMPEEAQEKATSELNKLKMMSPMSAE 287
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
T R Y++ + ++PW+K S+ + DL A++ LD+DHYGL +VK+RIIEYLAV++
Sbjct: 288 ATVVRSYIDTMINVPWKKRSK-VKKDLAGAQKILDADHYGLEKVKERIIEYLAVQQRINK 346
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC VGPPGVGKTSL SIA + GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+L
Sbjct: 347 LKGPILCLVGPPGVGKTSLGQSIARSTGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKL 406
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
I + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN F DHYL V +DLS V
Sbjct: 407 IQSMSKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSNFADHYLEVDYDLSDV 466
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N IP PLLDRMEVI L GYT +EKL I+++HLIP+ + ++GL + + I +
Sbjct: 467 MFVATSNSFN-IPGPLLDRMEVIRLSGYTEDEKLNISIQHLIPKQVKRNGLKANEVDIED 525
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+ + +I+ YTREAGVRNLER ++ L R A ++ LLD
Sbjct: 526 SAIIGIIRYYTREAGVRNLEREISKLCRKAVKEI---------------------LLDKE 564
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAA 635
T +V+++ LE LG RFD E +R+
Sbjct: 565 ---------------------------TKKVVINQENLEAFLGVQRFDYGKAEDGDRI-- 595
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
G GL WT GG++ +E A+ GKG+L TG LGDV++ES Q A+T VR RA L++
Sbjct: 596 -GQVTGLAWTEVGGDLLTIECAAVPGKGKLTFTGSLGDVMQESIQAAMTVVRNRAEKLRI 654
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
A + + RD+H+H P GA PKDGPSAG+ +VT+LVS + VR+D AMTGE+TLR
Sbjct: 655 NA----DFHEKRDVHVHVPEGATPKDGPSAGIAMVTSLVSSLTGNPVRSDVAMTGEITLR 710
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
G VLP+GG+K+K+LAAHR GIK VI+P+ N +DL E+P V LEI ++DVL A
Sbjct: 711 GEVLPIGGLKEKLLAAHRGGIKTVIIPKINERDLKEIPDNVREGLEIHPVTWIDDVLSLA 770
Query: 816 F 816
Sbjct: 771 L 771
>gi|170729734|ref|YP_001775167.1| endopeptidase La [Xylella fastidiosa M12]
gi|167964527|gb|ACA11537.1| Endopeptidase La [Xylella fastidiosa M12]
Length = 823
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 335/780 (42%), Positives = 473/780 (60%), Gaps = 67/780 (8%)
Query: 43 IHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT 102
+ H G A+ L L ++ P G T V++EGL R SV ++ +L
Sbjct: 66 VDLHTIGTYAQVLQL---LKLPDG--TIKVLVEGLTRVSVDQVVEHD-------GALRGC 113
Query: 103 KIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETV----PIHKLAD 157
IE+ ++ R+ +A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 114 GIEIASTQE-----REEREIEAIVRSLLSLFEQYVKTNRKLPPELLQTLNGIDDPGRLAD 168
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
A + + +L+++++ RL LVD + ++ ++I +V+ Q+ KSQ+E
Sbjct: 169 TIAAHLSVRLAYKQRLLETIEIGDRLEILIGLVDGEIDVQQMEKRIRGRVKSQMEKSQRE 228
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELGD DD +L L RK+ GMP ++ + EL +LK+M P
Sbjct: 229 YYLNEQMKAIQKELGDFDDLPSELEELARKIAEIGMPKSVQSKAKSELNKLKQMSPMSAE 288
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + +PW K ++ + DLK A+ LD DHYGL +VK+RI+EYLAV+
Sbjct: 289 AAVVRNYLDWLLGVPWRKCTK-VRKDLKVAQSTLDDDHYGLDKVKERILEYLAVQSRVKQ 347
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
RGP+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA++RGHRRTY+GSMPGR+
Sbjct: 348 MRGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEVRGHRRTYVGSMPGRV 407
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+ L +VG NP+ +LDEIDK D RGDP++ALLEVLDPEQN FNDHYL+V DLS+V
Sbjct: 408 VQNLNKVGSKNPLFVLDEIDKMAMDFRGDPSAALLEVLDPEQNNAFNDHYLDVDLDLSEV 467
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GLG E L I E
Sbjct: 468 MFVATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIRANGLGVEELAIGE 526
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
++ +++ YTRE+GVRNLER ++ + R K++ +G
Sbjct: 527 DAIRDIVRYYTRESGVRNLEREISKICRKIV---------------KEIALVG------- 564
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
V P + + + F +TS LEK LG RFD AE G
Sbjct: 565 ----------VKPFAKKSTKSKVLFAVTS------KNLEKYLGVRRFDFGR-AEEANEIG 607
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+ GL WT GG++ +E+T + GKG L LTGQLG+V+KESA ALT VR+RA +
Sbjct: 608 LVTGLAWTEVGGDLLQIESTLVPGKGNLILTGQLGNVMKESASAALTVVRSRADRFCI-- 665
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
++ L +D+H+H P GA PKDGPSAGV +VT+LVS+ ++ VRAD AMTGE+TLRG
Sbjct: 666 --DVDFLHNQDVHLHVPDGATPKDGPSAGVAMVTSLVSMLTKVPVRADVAMTGEITLRGR 723
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
V +GG+K+K+LAA R GI+ V++PE N +DL ++PA V +L I+ K +++VL+ A E
Sbjct: 724 VSVIGGLKEKLLAALRGGIRTVLIPEGNRRDLADIPANVTRALTIVPVKWIDEVLDLALE 783
>gi|253990889|ref|YP_003042245.1| ATP-dependent protease [Photorhabdus asymbiotica]
gi|253782339|emb|CAQ85503.1| ATP-dependent protease [Photorhabdus asymbiotica]
Length = 784
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 328/759 (43%), Positives = 457/759 (60%), Gaps = 85/759 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + L+ G +++A+ L+ + E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLRRARITTLTDNGEHFSAQAEYLDSPIVDEREQEVLIRTVINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + +E K LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLHSIEDAAK----------------LADTIAAHMPLKLNDKQTVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVVERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ L+RK+++A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYETLKRKIEAAKMPKEAREKAEAELQKLKMMSPMSAEATVVRSYIDWMVQVPWVN 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQETLDTDHYGLERVKERILEYLAVQSRISKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMSKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+I L GYT +EKL IA RHL+P+ ++++ L L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEIIRLSGYTEDEKLNIAKRHLLPKQIERNALKENELIIDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R K V L L+D L
Sbjct: 544 LEREISKLCR------------------KTVKTL---LMDKSLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG R D A R+ G GL WT GG++
Sbjct: 568 ------------IEINADNLKDYLGVQRVDYGRADTENRI---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKLGI----NSDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
GIK V++PE N +DL E+P ++A L+I KR+EDVL
Sbjct: 729 GGIKTVLIPEENKRDLEEIPQNIIADLQIHPVKRIEDVL 767
>gi|304908|gb|AAA16837.1| ATP-dependent protease [Escherichia coli str. K-12 substr. W3110]
Length = 784
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 333/765 (43%), Positives = 462/765 (60%), Gaps = 89/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + ++EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAERELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARTKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLAL 771
>gi|375309929|ref|ZP_09775207.1| ATP-dependent protease La [Paenibacillus sp. Aloe-11]
gi|375077882|gb|EHS56112.1| ATP-dependent protease La [Paenibacillus sp. Aloe-11]
Length = 778
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 318/765 (41%), Positives = 457/765 (59%), Gaps = 89/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPD--------- 114
P+G T V++EGL R + + + YY L E E V+ + D
Sbjct: 84 PNG--TIRVLVEGLERAEIIQYTDNEEYYEVLAKELH----EAENVQPETDALMRTVLTQ 137
Query: 115 ---FIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQL 171
+I LS++ + +S +E+ GR LAD+ + + +E+
Sbjct: 138 FEHYINLSKKVTPETLAAVSDIEEP----GR------------LADVITSHLTLKIKEKQ 181
Query: 172 VMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL 231
+L+++D+ RL K ++++ + + + KI+Q+V+ Q+ K+QKE+ LR+QM+AI++EL
Sbjct: 182 DILETIDVTQRLEKLLDILNNEREVLELERKISQRVKKQMEKTQKEYYLREQMKAIQKEL 241
Query: 232 GDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADL 291
G+ + ++ L ++ +P + + V+KE+ RL+KM R Y++ + L
Sbjct: 242 GEKEGRAGEVEELRNQLSELELPVPVKEKVEKEIDRLEKMPASSAEGGVIRNYVDWLLSL 301
Query: 292 PWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGV 351
PW +++ DLD+ A+E L+ DHYGL + K+R++EYLAVRKL +GP+LC VGPPGV
Sbjct: 302 PWNTFTDD-DLDIAKAEEVLNHDHYGLDKPKERVLEYLAVRKLVKTIKGPILCLVGPPGV 360
Query: 352 GKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVM 411
GKTSLA SIA ++GR+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV
Sbjct: 361 GKTSLARSIAKSMGREFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGTSNPVF 420
Query: 412 LLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPP 471
LLDEIDK SD RGDP++ALLEVLDPEQN TF+DH++ +PFDLS V+FV TAN A IP
Sbjct: 421 LLDEIDKMASDFRGDPSAALLEVLDPEQNNTFSDHFVELPFDLSNVMFVTTANAAHNIPR 480
Query: 472 PLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREA 531
PL+DRME + +PGYT EKL IA R+L+P+ +HGL E L I E + VI+ YTRE+
Sbjct: 481 PLMDRMETLYIPGYTELEKLEIANRYLLPKQKREHGLEEEQLVIGEDTLLRVIREYTRES 540
Query: 532 GVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPM 591
GVRNLE+ LA+L R AA V G E ++V P
Sbjct: 541 GVRNLEQQLASLCRKAAKSV---------------------------VSGGEGSIQVTPD 573
Query: 592 GESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEV 651
L+ LG +F AE G GL WT GGE
Sbjct: 574 N----------------------LKDYLGIAKF-RYGVAELEDQIGTVTGLAWTEVGGET 610
Query: 652 QFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHI 711
+E T + G G+L LTG+LGDV+KESAQ A ++ R++A++L + + + DIHI
Sbjct: 611 LMIEVTVVPGSGKLILTGKLGDVMKESAQAAFSYTRSKASELGIEP----DFYEKNDIHI 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA+PKDGPSAG+T+ TAL+S + + V D AMTGE+TLRG VLP+GG+K+K LAA
Sbjct: 667 HIPEGAIPKDGPSAGITIATALISALTNRHVSKDVAMTGEITLRGRVLPIGGLKEKSLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
HR G K+++LP+ N +DL ++P ++ +E + M+ VL+ A
Sbjct: 727 HRAGYKKILLPKDNERDLKDIPDSIRQDVEFVPVAHMDQVLKHAL 771
>gi|28198388|ref|NP_778702.1| ATP-dependent serine proteinase La [Xylella fastidiosa Temecula1]
gi|28056458|gb|AAO28351.1| ATP-dependent serine proteinase La [Xylella fastidiosa Temecula1]
Length = 830
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 333/781 (42%), Positives = 471/781 (60%), Gaps = 67/781 (8%)
Query: 42 VIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEM 101
V+ H G A+ L L ++ P G T V++EGL R SV ++ +L
Sbjct: 72 VVDLHAIGTYAQVLQL---LKLPDG--TIKVLVEGLTRVSVDQVVEHD-------GALRG 119
Query: 102 TKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLA 156
IE+ + + R+ +A L+S+ EQ KT + LL+T+ +LA
Sbjct: 120 CGIEIASTQGREE-----REIEAIVRSLLSLFEQYVKTNRKLPPELLQTLSGIDDPGRLA 174
Query: 157 DIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQK 216
D A + + +L+++++ RL LVD + ++ ++I +V+ Q+ KSQ+
Sbjct: 175 DTIAAHLSVRLAHKQRLLETIEIGDRLEILIGLVDGEIDVQQMEKRIRGRVKSQMEKSQR 234
Query: 217 EFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQP 276
E+ L +QM+AI++ELGD DD +L L RK+ GMP ++ + EL +LK+M P
Sbjct: 235 EYYLNEQMKAIQKELGDFDDLPSELEELARKIAEIGMPKSVQSKAKSELNKLKQMSPMSA 294
Query: 277 GYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKP 336
R YL+ + +PW K ++ + DLK A+ LD DHYGL +VK+RI+EYLAV+
Sbjct: 295 EAAVVRNYLDWLLGVPWRKCTK-VRKDLKVAQSTLDDDHYGLDKVKERILEYLAVQSRVK 353
Query: 337 DARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGR 396
RGP+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA++RGHRRTY+GSMPGR
Sbjct: 354 QMRGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEVRGHRRTYVGSMPGR 413
Query: 397 LIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 456
++ L +VG NP+ +LDEIDK D RGDP++ALLEVLDPEQN FNDHYL+V DLS+
Sbjct: 414 VVQNLNKVGSKNPLFVLDEIDKMAMDFRGDPSAALLEVLDPEQNNAFNDHYLDVDLDLSE 473
Query: 457 VIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIP 516
V+FVAT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL L I
Sbjct: 474 VMFVATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIRANGLVVGELAIG 532
Query: 517 EAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDN 576
E ++ +++ YTRE+GVRNLER ++ + R K++ +G
Sbjct: 533 EDAIRDIVRYYTRESGVRNLEREISKICRKIV---------------KEIALVG------ 571
Query: 577 RLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAP 636
V P + + + F +TS LEK LG RFD AE
Sbjct: 572 -----------VKPFAKKSTKSKVLFAVTS------KNLEKYLGVRRFDFGR-AEEANEI 613
Query: 637 GISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLV 696
G+ GL WT GG++ +E+T + GKG L LTGQLG V+KESA ALT VR+RA +
Sbjct: 614 GLVTGLAWTEVGGDLLQIESTLVPGKGNLILTGQLGSVMKESASAALTVVRSRADRFCI- 672
Query: 697 AEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRG 756
++ L +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ VRAD AMTGE+TLRG
Sbjct: 673 ---DVDFLHNQDVHLHVPDGATPKDGPSAGIAMVTSLVSMLTKVPVRADVAMTGEITLRG 729
Query: 757 LVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
V +GG+K+K+LAA R GI+ V++PE N +DL ++PA V +L I+ K +++VL+ A
Sbjct: 730 RVSVIGGLKEKLLAALRGGIRTVLIPEGNRRDLADIPANVTRALTIVPVKWIDEVLDLAL 789
Query: 817 E 817
E
Sbjct: 790 E 790
>gi|188578369|ref|YP_001915298.1| ATP-dependent protease La [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188522821|gb|ACD60766.1| ATP-dependent protease La [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 823
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 335/780 (42%), Positives = 478/780 (61%), Gaps = 63/780 (8%)
Query: 43 IHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT 102
+ H G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 66 VDLHTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGQGTEVEAS 120
Query: 103 KIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLAD 157
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 121 D------AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLAD 168
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
+ ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E
Sbjct: 169 TIAPHIGVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQRE 228
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 229 YYLNEQMKAIQKELGDLDDVPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAE 288
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+
Sbjct: 289 AAVVRNYLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQ 347
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL
Sbjct: 348 MKGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRL 407
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+ L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V
Sbjct: 408 VQNLNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEV 467
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ + +GL E ++I
Sbjct: 468 MFVATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIAMRYLVPKQIKANGLKPEEIEIGG 526
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
++ +++ YTRE+GVRNLER +A + R ++A
Sbjct: 527 DAIQDIVRYYTRESGVRNLEREVAKICRKVVKEIA------------------------- 561
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
LA P + V+ + + + V+ L+K LG RFD A E G
Sbjct: 562 LAG---------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-G 611
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+ GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 612 LVTGLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI-- 669
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ +RAD AMTGE+TLRG
Sbjct: 670 --DVDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSVLTKVPIRADVAMTGEITLRGR 727
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
V +GG+K+K+LAA R GI+ V++P N KDL ++PA V L+I+ K +++VL+ A E
Sbjct: 728 VSAIGGLKEKLLAALRGGIRTVLIPGENRKDLADIPANVTRDLKIVPVKWIDEVLDLALE 787
>gi|26989026|ref|NP_744451.1| ATP-dependent protease La [Pseudomonas putida KT2440]
gi|24983850|gb|AAN67915.1|AE016424_1 ATP-dependent protease La [Pseudomonas putida KT2440]
Length = 798
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 467/777 (60%), Gaps = 85/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ S + A +S ++ T +
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFSEVEGHIRAEVSLIDETDTAERE 122
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q ++ L ++ A E++S L + G +L D
Sbjct: 123 SEVFVRTLLSQFEQYVQLGKKVPA---EVLSSLNSIDEPG-------------RLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIVDLTTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW KA ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYLDWLVQVPW-KAQSKVRLDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L+P+ + +GL E L++ + +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKEELEVDVSAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R + Q+Q + +S+
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKVVKEHTGQKQVKVKVASE---------------- 568
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
LE +LG +F AE+ G
Sbjct: 569 ---------------------------------QLEHLLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|397698112|ref|YP_006535995.1| ATP-dependent protease La [Pseudomonas putida DOT-T1E]
gi|397334842|gb|AFO51201.1| ATP-dependent protease La [Pseudomonas putida DOT-T1E]
Length = 798
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 467/777 (60%), Gaps = 85/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ S + A +S ++ T +
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFSEVEGHIRAEVSLIDETDTAERE 122
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q ++ L ++ A E++S L + G +L D
Sbjct: 123 SEVFVRTLLSQFEQYVQLGKKVPA---EVLSSLNSIDEPG-------------RLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIVDLTTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALTKAQAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW KA ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYLDWLVQVPW-KAQSKVRLDLTKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L+P+ + +GL E L++ + +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKEELEVDISAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R + Q+Q + +S+
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKVVKEHTGQKQVKVKVASE---------------- 568
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
LE +LG +F AE+ G
Sbjct: 569 ---------------------------------QLEHLLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|288553616|ref|YP_003425551.1| ATP-dependent protease La 1 [Bacillus pseudofirmus OF4]
gi|288544776|gb|ADC48659.1| ATP-dependent protease La 1 [Bacillus pseudofirmus OF4]
Length = 775
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 313/760 (41%), Positives = 459/760 (60%), Gaps = 78/760 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G V + +EGL R +++ + IS L EQ E+ + A+ R
Sbjct: 83 PNGTVR--IHVEGLYRAEIEQYVENAEFLEVDISPLTE-----EQKERTTETQAIMRS-- 133
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPI-------HKLADIFVASFEISFEEQLVMLDS 176
L+ + EQ K KV ET+ H+ AD+ ++ + E+ +L+
Sbjct: 134 -----LLEMFEQYTKVS--KKVSQETLATVSDITEPHRFADVLASNLPLKLAEKQELLEM 186
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
++ RL ++++ + + + +KI Q+V+ + K+QKE+ LR+QM+AI++ELGD +
Sbjct: 187 NNVVERLLHLIDILNNEQEVLGLEKKIGQRVKKSMEKTQKEYYLREQMKAIQKELGDREG 246
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
++ L K++ A MP ++ + KEL R +KM + R Y+E + LPW
Sbjct: 247 RGGEVATLREKIEEAEMPESVEEKALKELDRYEKMPANSAESSVLRNYIEWLIQLPWVYE 306
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
+E+ LD+ A+E L+ DHYGL +VK+R++EYLAV++L + +GP+LC GPPGVGKTSL
Sbjct: 307 TED-QLDVNRAEEILNEDHYGLEKVKERVLEYLAVQQLTNELKGPILCLSGPPGVGKTSL 365
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
A SIA +L R+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K+ G NPV LLDEI
Sbjct: 366 ARSIARSLDREFVRISLGGVRDEAEIRGHRRTYVGAMPGRMIQGMKKAGSINPVFLLDEI 425
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK +D RGDP+SALLEVLDPEQN F+DHY+ P+DLSKV+FV TAN IP PL DR
Sbjct: 426 DKMANDFRGDPSSALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVTTANNIATIPGPLRDR 485
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
ME+I + GYT EK++IA +L+P+ + HG+ +Q+ + ++ VI+ YTREAGVRNL
Sbjct: 486 MEMIHIAGYTEVEKMQIAKNYLLPKQMKDHGIKKSMMQVKDEAIQKVIRYYTREAGVRNL 545
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER LA L R AA + +++ + ++K V
Sbjct: 546 ERQLATLCRKAAKMIVTGTKKRVILTAKTV------------------------------ 575
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
E +LG PRF +A E G + GL +T+ GG+ +E
Sbjct: 576 -------------------EDMLGKPRFRYGQAEEEDQV-GAATGLAYTSAGGDTLSIEV 615
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ RGKG+L LTG+LGDV+KESAQ A +++RAR+ +L++ + + DIHIH P G
Sbjct: 616 SLARGKGKLTLTGKLGDVMKESAQAAFSYIRARSKELEIEP----DFHEKNDIHIHVPEG 671
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAG+T+ TAL+S + + V+ + MTGE+TLRG VLP+GG+K+K ++AHR G+
Sbjct: 672 ATPKDGPSAGITMATALISALTGRVVKKEVGMTGEITLRGRVLPIGGLKEKSMSAHRAGL 731
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K +I+P+ N KDL +VP +V L IL ++DVL+ A
Sbjct: 732 KTIIIPKDNEKDLEDVPESVREDLNYILVGHLDDVLKHAL 771
>gi|269138350|ref|YP_003295050.1| ATP-dependent Lon protease [Edwardsiella tarda EIB202]
gi|387867069|ref|YP_005698538.1| ATP-dependent protease La [Edwardsiella tarda FL6-60]
gi|267984010|gb|ACY83839.1| ATP-dependent Lon protease, bacterial type [Edwardsiella tarda
EIB202]
gi|304558382|gb|ADM41046.1| ATP-dependent protease La Type I [Edwardsiella tarda FL6-60]
Length = 741
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 330/760 (43%), Positives = 461/760 (60%), Gaps = 75/760 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG+ R + LS G ++ A+ L+ EME+ EQ+ QF+
Sbjct: 41 PDGTVK--VLVEGIQRARITTLSDGGEHFAAQAEYLDTP--EMEEREQEVLVRTAINQFE 96
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
S ++ +K L ++ +LAD A + ++ +L+ D+ R
Sbjct: 97 -------SYIKLNKKIPPEVLTSLNSIDDAARLADTIAAHMPLKLNDKQTVLEMSDVAER 149
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ DD D+
Sbjct: 150 LEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMDDAPDEFE 209
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
AL+RK+++A MP + + EL++LK M P T R Y++ I +PW A ++
Sbjct: 210 ALKRKIEAAKMPKEAREKAESELQKLKMMSPMSAEATVVRSYIDWIVQVPWH-ARSKVKK 268
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTSL SIA
Sbjct: 269 DLRKAQETLDADHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTSLGQSIAR 328
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDEIDK SD
Sbjct: 329 ATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVRNPLFLLDEIDKMSSD 388
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLDRMEVI L
Sbjct: 389 MRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLDRMEVIRL 447
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR LER ++
Sbjct: 448 SGYTEDEKLNIARQHLLPKQIERNALKKGELTVDDSAIVGIIRYYTREAGVRALEREISK 507
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
L R A ++ LLD L
Sbjct: 508 LCRKAVKQL---------------------LLDKSL------------------------ 522
Query: 603 RITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
+ ++ L+ LG RFD ++ RV G GL WT GG++ +E +
Sbjct: 523 ---RHIEINGDNLKDYLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLTIETACVP 576
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHFPAGAV 718
GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H P GA
Sbjct: 577 GKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHVHVPEGAT 630
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR GIK
Sbjct: 631 PKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKT 690
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
V++P+ N +DL E+P VL L+I KR+++VL A +
Sbjct: 691 VLIPDDNKRDLEEMPENVLRDLDIHPVKRIDEVLALALQN 730
>gi|71276513|ref|ZP_00652788.1| Peptidase S16, ATP-dependent protease La [Xylella fastidiosa Dixon]
gi|71162690|gb|EAO12417.1| Peptidase S16, ATP-dependent protease La [Xylella fastidiosa Dixon]
gi|71728240|gb|EAO30424.1| Peptidase S16, ATP-dependent protease La [Xylella fastidiosa Ann-1]
Length = 823
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 334/780 (42%), Positives = 473/780 (60%), Gaps = 67/780 (8%)
Query: 43 IHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT 102
+ H G A+ L L ++ P G T V++EGL R SV ++ +L
Sbjct: 66 VDLHTIGTYAQVLQL---LKLPDG--TIKVLVEGLTRVSVDQVVEHD-------GALRGC 113
Query: 103 KIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETV----PIHKLAD 157
IE+ ++ R+ +A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 114 GIEIASTQE-----REEREIEAIVRSLLSLFEQYVKTNRKLPPELLQTLNGIDDPGRLAD 168
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
A + + +L+++++ RL LVD + ++ ++I +V+ Q+ KSQ+E
Sbjct: 169 TIAAHLSVRLAYKQRLLETIEIGDRLEILIGLVDGEIDVQQMEKRIRGRVKSQMEKSQRE 228
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELGD DD +L L RK+ GMP ++ + EL +LK+M P
Sbjct: 229 YYLNEQMKAIQKELGDFDDLPSELEELARKIAEIGMPKSVQSKAKSELNKLKQMSPMSAE 288
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + +PW K ++ + DLK A+ LD DHYGL +VK+RI+EYLAV+
Sbjct: 289 AAVVRNYLDWLLGVPWRKCTK-VRKDLKVAQSTLDDDHYGLDKVKERILEYLAVQSRVKQ 347
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
RGP+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA++RGHRRTY+GSMPGR+
Sbjct: 348 MRGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEVRGHRRTYVGSMPGRV 407
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+ L +VG NP+ +LDEIDK D RGDP++ALLEVLDPEQN FNDHYL+V DLS+V
Sbjct: 408 VQNLNKVGSKNPLFVLDEIDKMAMDFRGDPSAALLEVLDPEQNNAFNDHYLDVDLDLSEV 467
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GLG E L I E
Sbjct: 468 MFVATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIRANGLGVEELAIGE 526
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
++ +++ YTRE+GVRNLER ++ + R K++ +G
Sbjct: 527 DAIRDIVRYYTRESGVRNLEREISKICRKIV---------------KEIALVG------- 564
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
V P + + + F +TS LEK LG RFD AE G
Sbjct: 565 ----------VKPFAKKSTKSKVLFAVTS------KNLEKYLGVRRFDFGR-AEEANEIG 607
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+ GL WT GG++ +E+T + GKG L LTGQLG+V+KESA ALT VR+RA +
Sbjct: 608 LVTGLAWTEVGGDLLQIESTLVPGKGNLILTGQLGNVMKESASAALTVVRSRADRFCI-- 665
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
++ L +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ VRAD AMTGE+TLRG
Sbjct: 666 --DVDFLHNQDVHLHVPDGATPKDGPSAGIAMVTSLVSMLTKVPVRADVAMTGEITLRGR 723
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
V +GG+K+K+LAA R GI+ V++PE N +DL ++PA V +L I+ K +++VL+ A E
Sbjct: 724 VSVIGGLKEKLLAALRGGIRTVLIPEGNRRDLADIPANVTRALTIVPVKWIDEVLDLALE 783
>gi|284047885|ref|YP_003398224.1| ATP-dependent protease La [Acidaminococcus fermentans DSM 20731]
gi|283952106|gb|ADB46909.1| ATP-dependent protease La [Acidaminococcus fermentans DSM 20731]
Length = 772
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 301/665 (45%), Positives = 421/665 (63%), Gaps = 55/665 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
K+AD+ I EE+ +L++V++K RL + + L+ + + + I+Q+V Q+ +
Sbjct: 163 KIADMIAGYLTIDVEEKEKLLEAVNVKDRLHLLYGYLCKELEIVNLEKDISQQVRKQIEQ 222
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+Q+E+ LR+Q++AI +EL + + ++ + KM+ +P ++ + + KEL RL KM P
Sbjct: 223 NQREYYLREQLKAINKELDEGGEKGSEVKEYQEKMKKLKLPQDVQEKMDKELDRLYKMPP 282
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
R YL+ + LPW K +++ + DLK A LD DHYGL +VK+RI++YLAVR
Sbjct: 283 MMAESAVIRNYLDTVLSLPWGKMTQD-NYDLKKAAAVLDKDHYGLKKVKERILDYLAVRA 341
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L RGP++C VGPPGVGKTSLA SIA A+ RKF RISLGG++DEA+IRGHRRTYIG+M
Sbjct: 342 LTQSNRGPIICLVGPPGVGKTSLAQSIARAVNRKFTRISLGGIRDEAEIRGHRRTYIGAM 401
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGRLI+G+ G NPV LLDE+DK G+D RGDPASALLEVLDPEQN F+DHY+ P+D
Sbjct: 402 PGRLINGMIDCGTDNPVFLLDEVDKMGADFRGDPASALLEVLDPEQNSHFSDHYIEFPYD 461
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
+S V ++ TAN + IPP LLDR+EVIEL YT EEKL+IA HL+P+ +GL + L
Sbjct: 462 MSNVFWIVTANTVETIPPALLDRLEVIELSSYTDEEKLKIAQLHLLPKERKANGLTGKQL 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ A ++ +I+ YTREAGVRNLER +A + R AA K+ E
Sbjct: 522 SLGAASIQHIIRDYTREAGVRNLERKIATVCRKAARKIVE-------------------- 561
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
DG ++ V P A L+ LGP F + + R
Sbjct: 562 ------DGV-AKVSVTP----------------------AHLKDYLGPAIFLESDLRAR- 591
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
+ G+ GL WT+ GGE+ +E GKG+L LTGQLGDV+KESAQ A T++R+RA +L
Sbjct: 592 SEVGVCTGLAWTSVGGELLKIEVVVCEGKGKLVLTGQLGDVMKESAQAAFTYIRSRAKEL 651
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
L A + + DIHIH P GA+PKDGPSAG+T+ TA+ S ++++V+AD AMTGE+T
Sbjct: 652 GLPA----DFNEKVDIHIHVPEGAIPKDGPSAGITMATAMESALTKRKVKADLAMTGEIT 707
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
+ G VLP+GG+K+K+LAAHRY +K V++P +N +DL E+P V + I M+ V +
Sbjct: 708 ITGHVLPIGGLKEKVLAAHRYRVKTVLIPRQNQQDLEEIPEKVRNDMTFIPVDSMDQVTK 767
Query: 814 QAFEG 818
A E
Sbjct: 768 LALEA 772
>gi|259909250|ref|YP_002649606.1| DNA-binding ATP-dependent protease La [Erwinia pyrifoliae Ep1/96]
gi|385787574|ref|YP_005818683.1| DNA-binding ATP-dependent protease La [Erwinia sp. Ejp617]
gi|387872207|ref|YP_005803588.1| DNA-binding ATP-dependent protease La [Erwinia pyrifoliae DSM
12163]
gi|224964872|emb|CAX56394.1| ATP-dependent protease La [Erwinia pyrifoliae Ep1/96]
gi|283479301|emb|CAY75217.1| DNA-binding ATP-dependent protease La [Erwinia pyrifoliae DSM
12163]
gi|310766846|gb|ADP11796.1| DNA-binding ATP-dependent protease La [Erwinia sp. Ejp617]
Length = 784
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 329/764 (43%), Positives = 463/764 (60%), Gaps = 76/764 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EGL R + LS G ++TA+ L T E+E+ EQ+ QF+
Sbjct: 84 PDGTVK--VLVEGLQRAHITTLSDNGDHFTAKAEYL--TSPEIEEREQEVLVRTAINQFE 139
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
++ +K L ++ +LAD A + ++ +L+ D+ R
Sbjct: 140 G-------YIKLNKKIPPEVLTSLNSIDDAARLADTVAAHMPLKLADKQSVLEMSDVDER 192
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ DD D+
Sbjct: 193 LEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMDDAPDENE 252
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW A ++
Sbjct: 253 ALKRKIDAARMPKEAREKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-NARSKVKK 311
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
DL+ A+E LD+DH+GL RVK RI+EYLAV+ +GP+LC VGPPGVGKTSL SIA
Sbjct: 312 DLQKAQETLDTDHFGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTSLGQSIAK 371
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDEIDK SD
Sbjct: 372 ATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSD 431
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLDRMEVI L
Sbjct: 432 MRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLDRMEVIRL 490
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GYT +EKL IA +HL+ + ++++ L L + ++ + +I+ YTREAGVR+LER L+
Sbjct: 491 SGYTEDEKLNIAKKHLLSKQIERNALKEHELTVDDSAIVGIIRYYTREAGVRSLERELSK 550
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
L R A ++ + M +S +
Sbjct: 551 LCRKA--------------------------------------VKTLLMDKSVKHIE--- 569
Query: 603 RITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
++ L+ LG R+D ++ RV G GL WT GG++ +E +
Sbjct: 570 -------INADNLKDYLGVQRYDYGRADSENRV---GQVTGLAWTEVGGDLLTIETACVP 619
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHFPAGAV 718
GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H P GA
Sbjct: 620 GKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHVHVPEGAT 673
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR GIK
Sbjct: 674 PKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKT 733
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
V++P+ N +DL E+P V+A L+I KR+E+VL A + P+
Sbjct: 734 VLIPDENKRDLEEIPENVIADLDIHPVKRIEEVLTLALQ-NAPY 776
>gi|114563760|ref|YP_751273.1| ATP-dependent protease La [Shewanella frigidimarina NCIMB 400]
gi|114335053|gb|ABI72435.1| Lon-A peptidase. Serine peptidase. MEROPS family S16 [Shewanella
frigidimarina NCIMB 400]
Length = 783
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 325/777 (41%), Positives = 472/777 (60%), Gaps = 84/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +++ + ++ A LE ++ ++
Sbjct: 72 GTVASILQL---LKLPDGTVK--VLVEGGQRAKIKKYTQEEEFFAATAEYLESQELSEKE 126
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q +I L+++ + +S +++ + LAD
Sbjct: 127 EEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGIDEAAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +++ RL +++ + + V ++I +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKLEDKQSVLEMINVGERLEYLMAMMESEIDLLHVEKRIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ D+ L RK++ AGMPS+ + EL +LK M P T
Sbjct: 231 NEQMKAIQKELGDIDESHDEFEVLARKIEEAGMPSDAKEKATAELNKLKMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW++ S+ I DL A+E LD+DH+GL +VK+RI+EYLAV+ +G
Sbjct: 291 VRSYVDWMTAVPWKQRSK-IKRDLAKAQEVLDTDHHGLEKVKERILEYLAVQSRVKQLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKVIQK 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDP+SALLEVLDPEQN TFNDHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPSSALLEVLDPEQNATFNDHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + ++++GL + +++ ++ +
Sbjct: 470 ATSN-SMDIPGPLLDRMEVIRLSGYTEDEKLNIAKKHLLTKQIERNGLKEKEIKVDDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR+LER L+ + R + LLD
Sbjct: 529 LGIIRYYTREAGVRSLERELSKICRKVVKHI---------------------LLD----- 562
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
T ++ V++ L+ LG RFD + AE G
Sbjct: 563 -------------------KTVKVVE---VNQENLKSFLGVQRFDFGK-AESNNQIGQVT 599
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +EAT++ GKG+L TG LGDV+KES Q A+T VRARA +L +
Sbjct: 600 GLAWTQVGGDLLTIEATSVAGKGKLTYTGSLGDVMKESIQAAMTVVRARAENLGI----N 655
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + RDIH+H P GA PKDGPSAG + TALVS + VR+D AMTGE+TLRG VLP
Sbjct: 656 NDFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRSDVAMTGEITLRGEVLP 715
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK V++P+ N +DL E+PA V+A L I + +++VL+ A E
Sbjct: 716 IGGLKEKLLAAHRGGIKHVLIPQENERDLEEIPANVIADLIIHPVRWIDEVLKLALE 772
>gi|78046639|ref|YP_362814.1| endopeptidase La [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|78035069|emb|CAJ22714.1| endopeptidase La [Xanthomonas campestris pv. vesicatoria str.
85-10]
Length = 823
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 334/777 (42%), Positives = 477/777 (61%), Gaps = 63/777 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 69 YTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGQGTEIEASD-- 121
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 122 ----AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL+
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V+FV
Sbjct: 411 LNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E ++I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIKANGLKPEEIEIASDAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 530 QDIVRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
P + V+ + + + V+ L+K LG RFD A E G+
Sbjct: 565 ---------PQPVAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-GLVT 614
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 615 GLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----D 670
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ +R +RAD AMTGE+TLRG V
Sbjct: 671 VDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSILTRVPIRADVAMTGEITLRGRVSA 730
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI+ V++P+ N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 731 IGGLKEKLLAALRGGIRTVLIPDENRKDLDDIPPNVTRDLKIVPVKWIDEVLDLALE 787
>gi|392421144|ref|YP_006457748.1| ATP-dependent protease La [Pseudomonas stutzeri CCUG 29243]
gi|390983332|gb|AFM33325.1| ATP-dependent protease La [Pseudomonas stutzeri CCUG 29243]
Length = 798
Score = 570 bits (1470), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/774 (43%), Positives = 466/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R ++ + A +S +E +++
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGVIERFVEVDDHCRAEVSLIEEAEVD--- 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
+R+ + L+S EQ + G + +VL I +L D A
Sbjct: 120 ----------ARESEVFTRSLLSQFEQYVQLGKKVPAEVLSSLSSIDEPARLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQQILEITDLPARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+ + + EL +LK+M P T R
Sbjct: 230 MKAIQKELGDIDEGHNEVDELKKRIENAGLSKDAYTKANAELNKLKQMSPMSAEATVVRT 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
Y++ + ++PW KA+ ++ LDL A+E LD+DHYGL VK RI+EYLAV+K +GPVL
Sbjct: 290 YIDWLVNVPW-KAASKVRLDLAKAEEVLDADHYGLEEVKDRILEYLAVQKRVKKLKGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA + RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIARSTNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ TA
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTA 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IP PLLDRMEVI LPGYT +EK+ IA+R+L P+ ++ +GL L+ EA ++ +
Sbjct: 469 N-SMNIPAPLLDRMEVIRLPGYTEDEKVNIAIRYLAPKQIEANGLKKTELEFQEAAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR+LER LA + R KV ++
Sbjct: 528 IRYYTREAGVRSLERQLAKVCR----KVVKE----------------------------- 554
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
H F + VVD LE LG +F AE+ G GL
Sbjct: 555 ------------HAAEKRFHV----VVDAESLEHFLGVRKF-RYGLAEQQDQVGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG L TG LG+V+ ES ALT VR+RA L + A +
Sbjct: 598 WTQVGGELLTIEAAVVPGKGRLTKTGSLGEVMGESITAALTVVRSRAASLGMAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ +DIHIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKQDIHIHVPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N +DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENQRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|346723960|ref|YP_004850629.1| ATP-dependent Lon protease [Xanthomonas axonopodis pv. citrumelo
F1]
gi|346648707|gb|AEO41331.1| ATP-dependent Lon protease [Xanthomonas axonopodis pv. citrumelo
F1]
Length = 823
Score = 570 bits (1470), Expect = e-159, Method: Compositional matrix adjust.
Identities = 334/777 (42%), Positives = 476/777 (61%), Gaps = 63/777 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 69 YTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGQGTEIEASD-- 121
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 122 ----AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWRKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL+
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V+FV
Sbjct: 411 LNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E ++I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIKANGLKPEEIEIASDAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 530 QDIVRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
P + V+ + + + V+ L+K LG RFD A E G+
Sbjct: 565 ---------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-GLVT 614
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 615 GLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----D 670
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ +R +RAD AMTGE+TLRG V
Sbjct: 671 VDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSILTRVPIRADVAMTGEITLRGRVSA 730
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI+ V++P+ N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 731 IGGLKEKLLAALRGGIRTVLIPDENRKDLADIPPNVTRDLKIVPVKWIDEVLDLALE 787
>gi|326800381|ref|YP_004318200.1| anti-sigma H sporulation factor LonB [Sphingobacterium sp. 21]
gi|326551145|gb|ADZ79530.1| anti-sigma H sporulation factor, LonB [Sphingobacterium sp. 21]
Length = 818
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 323/774 (41%), Positives = 467/774 (60%), Gaps = 74/774 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G A + + ++ P G T V+++G RF ++E Y A I +
Sbjct: 101 HTVGTVAMIIKM---LQMPDGNTT--VIIQGKQRFRLKEEIQSEPYIKASIE-----RFI 150
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS--- 162
E+ +++ +F AL K A+++I++ T + ++ + F++S
Sbjct: 151 EEKAKKEKEFNALISSIKELALQIINI---SPNIPSETGIAIKNIESSSFLINFISSNMN 207
Query: 163 FEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQ 222
+++ ++QL L+ D+K R +K E + LQ + + +I KV L K Q+++ L Q
Sbjct: 208 ADLTLKQQL--LEMKDVKDRANKVLEQLTAELQLLELKNQIQNKVRVDLDKQQRDYFLNQ 265
Query: 223 QMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSR 282
Q++ I+EELG + D + + L +K + H +KEL +L ++ P Y+
Sbjct: 266 QLKTIQEELGGSTPDLE-IEELRKKSLEKKWSREVATHFKKELDKLSRINPAAADYSVQL 324
Query: 283 VYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPV 342
YLEL+ DLPW + S++ + DLK A++ LD DHYGL +VK+RIIEYLAV KLK D + P+
Sbjct: 325 NYLELLIDLPWNEFSKD-NFDLKRAEKILDKDHYGLEKVKRRIIEYLAVLKLKRDMKAPI 383
Query: 343 LCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLK 402
LC VGPPGVGKTSL SIA AL RK++R++LGGV+DEA+IRGHR+TYIG+MPGR+I LK
Sbjct: 384 LCLVGPPGVGKTSLGKSIAKALNRKYVRMALGGVRDEAEIRGHRKTYIGAMPGRVIQSLK 443
Query: 403 RVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVAT 462
+ G NPV +LDEIDK G+D RGDP+SALLEVLDPEQN F DHY+ + FDLS V+F+AT
Sbjct: 444 KAGTSNPVFVLDEIDKVGNDFRGDPSSALLEVLDPEQNSAFYDHYVEMDFDLSNVMFIAT 503
Query: 463 ANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKL 522
AN + P LLDRME+IE+ GYT EEK+ IA +HL+P+ +QHGL ++ + + ++++
Sbjct: 504 ANSLSTVQPALLDRMEIIEVNGYTIEEKIEIAKKHLLPKQREQHGLTAKDISLKGSVIEK 563
Query: 523 VIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGA 582
VI YTRE+GVR LE+ + AL R AA +
Sbjct: 564 VIDEYTRESGVRGLEKKIGALVRGAATNIV------------------------------ 593
Query: 583 EVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGL 642
ME P+G S I+ VVD +LG P + D++ E G+ GL
Sbjct: 594 ---MET-PIGPS---------ISQQEVVD------ILGAPIY-DKDLYESNDVAGVVTGL 633
Query: 643 VWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN 702
WT GG++ F+E++ GKG+L LTG LGDV+KESA IA+ ++RA A D ++ +
Sbjct: 634 AWTQVGGDILFIESSLSPGKGKLTLTGNLGDVMKESAGIAMAYLRAHAADFKI----DFD 689
Query: 703 LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVG 762
L D+HIH PAGA PKDGPSAG+T++TAL S F++++VRA+ AMTGE+TLRG VLPVG
Sbjct: 690 LFDKWDVHIHVPAGATPKDGPSAGITMLTALASSFTQRKVRANLAMTGEITLRGKVLPVG 749
Query: 763 GVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
G+K+KILAA R IK +IL + N KD++E+ + L M++V++ A
Sbjct: 750 GIKEKILAAKRANIKDIILCKSNRKDILEIKEDYIKDLNFHYVNEMKEVVDLAL 803
>gi|417558941|ref|ZP_12209900.1| ATP-dependent Lon protease, bacterial type [Xylella fastidiosa
EB92.1]
gi|338178523|gb|EGO81509.1| ATP-dependent Lon protease, bacterial type [Xylella fastidiosa
EB92.1]
Length = 830
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/781 (42%), Positives = 471/781 (60%), Gaps = 67/781 (8%)
Query: 42 VIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEM 101
V+ H G A+ L L ++ P G T V++EGL R SV ++ +L
Sbjct: 72 VVDLHAIGTYAQVLQL---LKLPDG--TIKVLVEGLTRVSVDQVVEHD-------GALRG 119
Query: 102 TKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLA 156
IE+ + + R+ +A L+S+ EQ KT + LL+T+ +LA
Sbjct: 120 CGIEIASTQGREE-----REIEAIVRSLLSLFEQYVKTNRKLPPELLQTLSGIDDPGRLA 174
Query: 157 DIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQK 216
D A + + +L+++++ RL LVD + ++ ++I +V+ Q+ KSQ+
Sbjct: 175 DTIAAHLSVRLAHKQRLLETIEIGDRLEILIGLVDGEIDVQQMEKRIRGRVKSQMEKSQR 234
Query: 217 EFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQP 276
E+ L +QM+AI++ELGD DD +L L RK+ GMP ++ + EL +LK+M P
Sbjct: 235 EYYLNEQMKAIQKELGDFDDLPSELEELARKIAEIGMPKSVQSKAKSELNKLKQMSPMSA 294
Query: 277 GYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKP 336
R YL+ + +PW K ++ + DLK A+ LD DHYGL +VK+RI+EYLAV+
Sbjct: 295 EAAVVRNYLDWLLGVPWRKCTK-VRKDLKVAQSTLDYDHYGLDKVKERILEYLAVQSRVK 353
Query: 337 DARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGR 396
RGP+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA++RGHRRTY+GSMPGR
Sbjct: 354 QMRGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEVRGHRRTYVGSMPGR 413
Query: 397 LIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 456
++ L +VG NP+ +LDEIDK D RGDP++ALLEVLDPEQN FNDHYL+V DLS+
Sbjct: 414 VVQNLNKVGSKNPLFVLDEIDKMAMDFRGDPSAALLEVLDPEQNNAFNDHYLDVDLDLSE 473
Query: 457 VIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIP 516
V+FVAT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL L I
Sbjct: 474 VMFVATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIRANGLVVGELAIG 532
Query: 517 EAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDN 576
E ++ +++ YTRE+GVRNLER ++ + R K++ +G
Sbjct: 533 EDAIRDIVRYYTRESGVRNLEREISKICRKIV---------------KEIALVG------ 571
Query: 577 RLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAP 636
V P + + + F +TS LEK LG RFD AE
Sbjct: 572 -----------VKPFAKKSTKSKVLFAVTS------KNLEKYLGVRRFDFGR-AEEANEI 613
Query: 637 GISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLV 696
G+ GL WT GG++ +E+T + GKG L LTGQLG V+KESA ALT VR+RA +
Sbjct: 614 GLVTGLAWTEVGGDLLQIESTLVPGKGNLILTGQLGSVMKESASAALTVVRSRADRFCI- 672
Query: 697 AEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRG 756
++ L +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ VRAD AMTGE+TLRG
Sbjct: 673 ---DVDFLHNQDVHLHVPDGATPKDGPSAGIAMVTSLVSMLTKVPVRADVAMTGEITLRG 729
Query: 757 LVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
V +GG+K+K+LAA R GI+ V++PE N +DL ++PA V +L I+ K +++VL+ A
Sbjct: 730 RVSVIGGLKEKLLAALRGGIRTVLIPEGNRRDLADIPANVTRALTIVPVKWIDEVLDLAL 789
Query: 817 E 817
E
Sbjct: 790 E 790
>gi|182681030|ref|YP_001829190.1| ATP-dependent protease La [Xylella fastidiosa M23]
gi|386084551|ref|YP_006000833.1| ATP-dependent serine proteinase La [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|182631140|gb|ACB91916.1| ATP-dependent protease La [Xylella fastidiosa M23]
gi|307579498|gb|ADN63467.1| ATP-dependent serine proteinase La [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 823
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/781 (42%), Positives = 471/781 (60%), Gaps = 67/781 (8%)
Query: 42 VIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEM 101
V+ H G A+ L L ++ P G T V++EGL R SV ++ +L
Sbjct: 65 VVDLHAIGTYAQVLQL---LKLPDG--TIKVLVEGLTRVSVDQVVEHD-------GALRG 112
Query: 102 TKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLA 156
IE+ + + R+ +A L+S+ EQ KT + LL+T+ +LA
Sbjct: 113 CGIEIASTQGREE-----REIEAIVRSLLSLFEQYVKTNRKLPPELLQTLSGIDDPGRLA 167
Query: 157 DIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQK 216
D A + + +L+++++ RL LVD + ++ ++I +V+ Q+ KSQ+
Sbjct: 168 DTIAAHLSVRLAHKQRLLETIEIGDRLEILIGLVDGEIDVQQMEKRIRGRVKSQMEKSQR 227
Query: 217 EFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQP 276
E+ L +QM+AI++ELGD DD +L L RK+ GMP ++ + EL +LK+M P
Sbjct: 228 EYYLNEQMKAIQKELGDFDDLPSELEELARKIAEIGMPKSVQSKAKSELNKLKQMSPMSA 287
Query: 277 GYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKP 336
R YL+ + +PW K ++ + DLK A+ LD DHYGL +VK+RI+EYLAV+
Sbjct: 288 EAAVVRNYLDWLLGVPWRKCTK-VRKDLKVAQSTLDDDHYGLDKVKERILEYLAVQSRVK 346
Query: 337 DARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGR 396
RGP+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA++RGHRRTY+GSMPGR
Sbjct: 347 QMRGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEVRGHRRTYVGSMPGR 406
Query: 397 LIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 456
++ L +VG NP+ +LDEIDK D RGDP++ALLEVLDPEQN FNDHYL+V DLS+
Sbjct: 407 VVQNLNKVGSKNPLFVLDEIDKMAMDFRGDPSAALLEVLDPEQNNAFNDHYLDVDLDLSE 466
Query: 457 VIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIP 516
V+FVAT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL L I
Sbjct: 467 VMFVATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIRANGLVVGELAIG 525
Query: 517 EAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDN 576
E ++ +++ YTRE+GVRNLER ++ + R K++ +G
Sbjct: 526 EDAIRDIVRYYTRESGVRNLEREISKICRKIV---------------KEIALVG------ 564
Query: 577 RLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAP 636
V P + + + F +TS LEK LG RFD AE
Sbjct: 565 -----------VKPFAKKSTKSKVLFAVTS------KNLEKYLGVRRFDFGR-AEEANEI 606
Query: 637 GISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLV 696
G+ GL WT GG++ +E+T + GKG L LTGQLG V+KESA ALT VR+RA +
Sbjct: 607 GLVTGLAWTEVGGDLLQIESTLVPGKGNLILTGQLGSVMKESASAALTVVRSRADRFCI- 665
Query: 697 AEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRG 756
++ L +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ VRAD AMTGE+TLRG
Sbjct: 666 ---DVDFLHNQDVHLHVPDGATPKDGPSAGIAMVTSLVSMLTKVPVRADVAMTGEITLRG 722
Query: 757 LVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
V +GG+K+K+LAA R GI+ V++PE N +DL ++PA V +L I+ K +++VL+ A
Sbjct: 723 RVSVIGGLKEKLLAALRGGIRTVLIPEGNRRDLADIPANVTRALTIVPVKWIDEVLDLAL 782
Query: 817 E 817
E
Sbjct: 783 E 783
>gi|433679140|ref|ZP_20510916.1| ATP-dependent Lon protease [Xanthomonas translucens pv. translucens
DSM 18974]
gi|430815744|emb|CCP41466.1| ATP-dependent Lon protease [Xanthomonas translucens pv. translucens
DSM 18974]
Length = 824
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 340/777 (43%), Positives = 473/777 (60%), Gaps = 58/777 (7%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A+ L L ++ P G T V++EGL R SV+ ++ R ++
Sbjct: 69 YNVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVSVENVAERDG------------ALQ 111
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
E E D R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 112 GEGSEIDAVESREEREVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+++++ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLETLEVGERLEMLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K S+ + DLK A+E LD+DHYGL +VK RI+EYLAV+ RG
Sbjct: 292 VRNYLDWLLGVPWKKRSK-VRKDLKVAQETLDADHYGLEKVKDRILEYLAVQSRVKQMRG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +V NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V+FV
Sbjct: 411 LNKVSSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ L +GL + L+I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLAIAMRYLVPKQLKANGLKGDELEIAADAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A L P
Sbjct: 530 RDIVRYYTRESGVRNLEREVAKICRKVVKEIA----------------LSGPQPAAAKKA 573
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
A+ V + R++ V L+K LG RFD A E+ G+
Sbjct: 574 PAKKGAAV---------RKDKARVS----VGSRNLDKYLGVRRFDFGRAEEQNEV-GLVT 619
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +E+T + GKG + LTGQLGDV+KESA AL+ VR+RA L +
Sbjct: 620 GLAWTEVGGDLLQIESTLVPGKGAVILTGQLGDVMKESASAALSVVRSRAERLGI----E 675
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ V AD AMTGE+TLRG V
Sbjct: 676 VDFLQKHDVHLHVPDGATPKDGPSAGIAMVTSLVSMLTKVPVNADVAMTGEITLRGRVSA 735
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI VI+PE N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 736 IGGLKEKLLAALRGGIHTVIIPEENRKDLADIPDNVTRDLKIVPVKWIDEVLDLALE 792
>gi|395444303|ref|YP_006384556.1| ATP-dependent protease La [Pseudomonas putida ND6]
gi|388558300|gb|AFK67441.1| ATP-dependent protease La [Pseudomonas putida ND6]
Length = 798
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 466/777 (59%), Gaps = 85/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ S + A +S ++ T +
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFSEVEGHIRAEVSLIDETDTAERE 122
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q ++ L ++ A E++S L + G +L D
Sbjct: 123 SEVFVRTLLSQFEQYVQLGKKVPA---EVLSSLNSIDEPG-------------RLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIVDLTTRVEHVLALLDAEIDLLQVEKRIRCRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALTKAQAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW KA ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYLDWLVQVPW-KAQSKVRLDLTKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L+P+ + +GL E L + + +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKEELDVDISAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R + Q+Q + +S+
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKVVKEHTGQKQVKVKVASE---------------- 568
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
LE +LG +F AE+ G
Sbjct: 569 ---------------------------------QLEHLLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|327399436|ref|YP_004340305.1| anti-sigma H sporulation factor LonB [Hippea maritima DSM 10411]
gi|327182065|gb|AEA34246.1| anti-sigma H sporulation factor, LonB [Hippea maritima DSM 10411]
Length = 787
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 325/773 (42%), Positives = 456/773 (58%), Gaps = 80/773 (10%)
Query: 54 ALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP 113
A + R ++ P GRV V+++GL + V+ + Y A +VE+
Sbjct: 80 ACLILRMLKMPDGRVK--VLVQGLKKVKVRNFTQLKPYMEA-------------EVEEKV 124
Query: 114 DFIALSRQFKATAMELI-SVLEQKQKTGGRTKVLLETVPI--------HKLADIFVASFE 164
D LS + L+ +V +Q Q+ K + + + K DI ++ +
Sbjct: 125 DIPPLSEHEEMETEALMRAVKDQLQQLSAYNKNIPNDIVVIANNIEEPDKFTDIIASNLQ 184
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+ +L+ + RL + E++D+ LQ + + KI + + ++SK+QKE+ LR+QM
Sbjct: 185 LKTYVAQELLEIPLVIERLKRLNEILDKELQLLALQTKIQNQAKEEISKTQKEYFLREQM 244
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+AIK+ELG+ D D++ L+ K++ A MP K +K+L RL KM P R Y
Sbjct: 245 KAIKKELGEGDIS-DEIEELKEKIKKAKMPKEAQKEAEKQLLRLSKMHPDSAEANVIRTY 303
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
L+ + +PW K S+E +++K + L+ DHY + K RI+EYL+V+KLK D +GP+LC
Sbjct: 304 LDWLIAMPWSKRSQE-KINIKEVERILNEDHYDIKEAKLRILEYLSVKKLKKDMKGPILC 362
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
FVGPPGVGKTSLA SIA A+ RK +RISLGGV+DEA+IRGHRRTY+G++PGR+I GLK+
Sbjct: 363 FVGPPGVGKTSLAKSIARAINRKLVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGLKQA 422
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
GV NPV +LDEIDK D GDPASALLE LDPEQN F DHYL VPFDLS+V F+ TAN
Sbjct: 423 GVKNPVFVLDEIDKLSRDFSGDPASALLEALDPEQNSEFEDHYLGVPFDLSEVFFITTAN 482
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
+ IPPPLLDRMEVI L GYT EEK++IA +++IP+ + +HGL ++ + ++ +I
Sbjct: 483 TTETIPPPLLDRMEVIRLSGYTVEEKMKIAKKYIIPKQIKEHGLDKFEVKFTDGAIRKII 542
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEV 584
+ YTREAGVRNLE+ +A + R A ++AE ++
Sbjct: 543 ENYTREAGVRNLEKTIAKVLRKIAKEIAEGSKQ--------------------------- 575
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
+F+ITS L K LG P F E ++ GI+ GL W
Sbjct: 576 ---------------TSFQITS------NNLLKYLGVPSFSVDEKLDKNYI-GIATGLAW 613
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GG V F+E + ++G G+L LTG LGDV+KESAQ ALT+ R+R L L N
Sbjct: 614 TPVGGSVLFIEVSKVKGSGKLLLTGSLGDVMKESAQAALTFARSRYEMLGL----DENFY 669
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
+ D+HIH P GA PKDGPSAG+T+ TA++S + VR D AMTGE+TL G VLP+GG+
Sbjct: 670 EKYDLHIHVPEGATPKDGPSAGITIATAIISCLTETPVRHDIAMTGEITLTGRVLPIGGL 729
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLA-SLEIILAKRMEDVLEQAF 816
K+K LAA R GI +I+P N KD EV + + L+ K ME+VL++A
Sbjct: 730 KEKTLAALRAGINEIIVPYDNKKDAEEVQNQIKSKKLKYHFVKTMEEVLDKAL 782
>gi|338737136|ref|YP_004674098.1| DNA-binding ATP-dependent protease La [Hyphomicrobium sp. MC1]
gi|337757699|emb|CCB63522.1| DNA-binding ATP-dependent protease La, induced by heat shock and
other stresses [Hyphomicrobium sp. MC1]
Length = 803
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 319/764 (41%), Positives = 459/764 (60%), Gaps = 69/764 (9%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ R + P G T+ +V++G+ R + + + AR+ ++ + ++E
Sbjct: 98 NIIRYIAAPDG--THHIVVQGVQRIRILDFLPGTPFPVARVVNIPEPETRSTEIE----- 150
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
A R +A A+E + +L Q T + T P LAD+ +I E++ +L+
Sbjct: 151 -ARFRNLQAQALEAVQLLPQAPPEL-ITTIQNATSP-ATLADLAAGYMDIPSEQKQSILE 207
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+VDL R+ + + L+ ++ +R+ ++I ++ + + Q+E +LR+QM AI+ +LG+ D
Sbjct: 208 TVDLSTRIDRVSALLAERIEVMRLTQEIGRQTKAAFDERQREAVLREQMAAIQRQLGEGD 267
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELIADLPWE 294
++ L + A MP + +KEL R ++M P+ G R YL+ + +LPW
Sbjct: 268 GKSQEVAELTEAIAKAKMPPEVESQAKKELARYQRM-PEAAGEAGMIRTYLDWLIELPW- 325
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKT 354
E +D+ A+ LD DH+GL ++K RIIEYLAVRKL P + P+LCFVGPPGVGKT
Sbjct: 326 SLPEAKPIDIAEARRILDQDHFGLEKIKTRIIEYLAVRKLAPQGKAPILCFVGPPGVGKT 385
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
SL SIA A+GR F+R+SLGGV DEA+IRGHRRTY+G++PG +I G+K+ G N VM+LD
Sbjct: 386 SLGQSIARAMGRPFVRVSLGGVHDEAEIRGHRRTYVGALPGNIIQGIKKAGARNCVMMLD 445
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
EIDK G ++GDP++A+LEVLDPEQN TF D+YL VPFDLS+V+F+ATAN IP PL
Sbjct: 446 EIDKMGRGIQGDPSAAMLEVLDPEQNSTFRDNYLGVPFDLSRVVFIATANMLDTIPGPLR 505
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRME+I L GYT EKL+IA R+L+ R L+ +GL E I + + +I+ YTREAGVR
Sbjct: 506 DRMEIISLAGYTETEKLQIARRYLVKRQLEANGLKPEQADIDDEAIAAIIRGYTREAGVR 565
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVH-RLGSPLLDNRLADGAEVEMEVIPMGE 593
NLER++ + R AAV++AE + DV LG P +N EV M
Sbjct: 566 NLERDIGQVFRHAAVQIAEGSTQHVHIGVADVSATLGQPRFEN------EVAM------- 612
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
R + PG++ GL WT GG++ F
Sbjct: 613 --------------------------------------RTSVPGVATGLAWTPVGGDILF 634
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+EAT GKG L LTGQLGDV++ESAQ A+T V++RAT L + + + DIH+H
Sbjct: 635 IEATRAPGKGGLILTGQLGDVMRESAQAAMTLVKSRATSLGI----DPAIFERNDIHVHV 690
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
PAGA PKDGPSAGV + ALVSL + + +R+DTAMTGE++LRGLVLPVGG+K+K++AA
Sbjct: 691 PAGATPKDGPSAGVAMFMALVSLLTNRTIRSDTAMTGEISLRGLVLPVGGIKEKVVAAAA 750
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GI RV+LP RN +D ++P LE + +R++D + A E
Sbjct: 751 AGITRVMLPARNRRDYDDIPEDARNRLEFVWLERVDDAVAAALE 794
>gi|337750706|ref|YP_004644868.1| hypothetical protein KNP414_06477 [Paenibacillus mucilaginosus
KNP414]
gi|379723754|ref|YP_005315885.1| hypothetical protein PM3016_6089 [Paenibacillus mucilaginosus 3016]
gi|386726506|ref|YP_006192832.1| hypothetical protein B2K_30915 [Paenibacillus mucilaginosus K02]
gi|336301895|gb|AEI44998.1| Lon [Paenibacillus mucilaginosus KNP414]
gi|378572426|gb|AFC32736.1| Lon [Paenibacillus mucilaginosus 3016]
gi|384093631|gb|AFH65067.1| hypothetical protein B2K_30915 [Paenibacillus mucilaginosus K02]
Length = 776
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 315/754 (41%), Positives = 453/754 (60%), Gaps = 68/754 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVE-QDPDFIALSRQF 122
P+G T V++EG+ R + E + YY E+T E+ ++E DP+ AL R
Sbjct: 84 PNG--TIRVLVEGVIRAEITEFLSNEEYY-------EVTVKELPELETSDPEIDALMRTV 134
Query: 123 KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
I++ K+ T + + +LAD+ + + +++ +L++V++K R
Sbjct: 135 LNQFEHYINL--SKKVTPETLAAVSDIDEPGRLADVICSHLSLKIKDKQEILETVNVKDR 192
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L K +++ + + + KI+Q+V+ Q+ K+QKE+ LR+QM+AI++ELGD + ++
Sbjct: 193 LEKLLAILNNEREVLELERKISQRVKKQMEKTQKEYYLREQMKAIQKELGDKEGRAGEVE 252
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
L ++ +G+P + + ++KE+ RL+KM + R Y++ + LPW +E+ DL
Sbjct: 253 DLRSQLAESGVPEKVREKIEKEIDRLEKMPATSAEGSVIRNYIDWLLGLPWNNETED-DL 311
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
D++ A+E L+ DHYGL + K+R++EYLAV+KL +GP+LC GPPGVGKTS+A SIA
Sbjct: 312 DIQKAEEILNEDHYGLEKPKERVLEYLAVQKLVKKLKGPILCLAGPPGVGKTSIARSIAR 371
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
+LGR+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K G NPV LLDEIDK D
Sbjct: 372 SLGREFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKTAGTNNPVFLLDEIDKMAMD 431
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
RGDPASALLEVLDPEQN TF+DHY+ VPFDLS V+F+ TAN Q IP PLLDRMEV+ +
Sbjct: 432 FRGDPASALLEVLDPEQNSTFSDHYIEVPFDLSNVMFITTANVIQNIPRPLLDRMEVLYI 491
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
PGYT EKL I ++L+P+ HGL L + EA + ++ YTREAGVRNLE+ +++
Sbjct: 492 PGYTEVEKLHIGKKYLLPKQQRDHGLEDGQLVVDEAALMRTVREYTREAGVRNLEQQISS 551
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
+ R A +Q + + VH
Sbjct: 552 ICRKGA--------KQIVGGASTVH----------------------------------- 568
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
V L+ LG P+F A ER G GL WT GG+ +E T M G
Sbjct: 569 -------VTAENLKDFLGNPKFRFGMAEERDQV-GAVTGLAWTEVGGDTLVIEVTVMPGN 620
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
G+L LTG+LGDV+KESAQ A ++ R+R + + + DIHIH P GA+PKDG
Sbjct: 621 GKLTLTGKLGDVMKESAQAAFSYTRSRVEQFHIQP----DFHEKFDIHIHIPEGAIPKDG 676
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAG+T+ TAL+S + V AMTGE+TLRG VLP+GG+K+K +AAHR GI+ +ILP
Sbjct: 677 PSAGITMGTALISALTNIPVSRHVAMTGEITLRGRVLPIGGLKEKCMAAHRAGIRTIILP 736
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+ N KD+ ++P +V L M++VLE A
Sbjct: 737 KDNAKDIDDIPESVRNELTFYPVSHMDEVLEHAL 770
>gi|188534630|ref|YP_001908427.1| DNA-binding ATP-dependent protease La [Erwinia tasmaniensis Et1/99]
gi|188029672|emb|CAO97551.1| ATP-dependent protease La [Erwinia tasmaniensis Et1/99]
Length = 784
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 325/768 (42%), Positives = 460/768 (59%), Gaps = 89/768 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L +IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGDHFSAQAEYLTSPEIEEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ +E + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIEDAVR----------------LADTVAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAREKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DH+GL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLQKAQETLDTDHFGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+ + ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLSKQIERNALKEHELTVDDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A ++ + M +S
Sbjct: 544 LERELSKLCRKA--------------------------------------VKTLLMDKSV 565
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG R+D ++ RV G GL WT GG++
Sbjct: 566 KHIE----------INADNLKDYLGVQRYDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
HR GIK V++P+ N +DL E+P V+A LEI KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPDENKRDLEEIPENVIADLEIHPVKRIEEVLALALQNA 774
>gi|292487471|ref|YP_003530343.1| DNA-binding ATP-dependent protease La [Erwinia amylovora CFBP1430]
gi|292898713|ref|YP_003538082.1| ATP-dependent protease La [Erwinia amylovora ATCC 49946]
gi|428784406|ref|ZP_19001897.1| DNA-binding ATP-dependent protease La [Erwinia amylovora ACW56400]
gi|291198561|emb|CBJ45669.1| ATP-dependent protease La [Erwinia amylovora ATCC 49946]
gi|291552890|emb|CBA19935.1| DNA-binding ATP-dependent protease La [Erwinia amylovora CFBP1430]
gi|312171576|emb|CBX79834.1| DNA-binding ATP-dependent protease La [Erwinia amylovora ATCC
BAA-2158]
gi|426275968|gb|EKV53695.1| DNA-binding ATP-dependent protease La [Erwinia amylovora ACW56400]
Length = 784
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 329/764 (43%), Positives = 463/764 (60%), Gaps = 76/764 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EGL R + LS G ++TA+ L T E+E+ EQ+ QF+
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGDHFTAKAEYL--TSPEIEEREQEVLVRTAINQFE 139
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
++ +K L ++ +LAD A + ++ +L+ D+ R
Sbjct: 140 G-------YIKLNKKIPPEVLTSLNSIDDAARLADTVAAHMPLKLSDKQSVLEMSDVDER 192
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ DD D+
Sbjct: 193 LEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMDDAPDENE 252
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW A ++
Sbjct: 253 ALKRKIDAARMPKEAREKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-NARSKVKK 311
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
DL+ A+E LD+DH+GL RVK RI+EYLAV+ +GP+LC VGPPGVGKTSL SIA
Sbjct: 312 DLQKAQETLDTDHFGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTSLGQSIAK 371
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDEIDK SD
Sbjct: 372 ATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSD 431
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLDRMEVI L
Sbjct: 432 MRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLDRMEVIRL 490
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GYT +EKL IA +HL+ + ++++ L L + ++ + +I+ YTREAGVR+LER L+
Sbjct: 491 SGYTEDEKLNIAKKHLLSKQIERNALKEHELIVDDSAIVGIIRYYTREAGVRSLERELSK 550
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
L R A ++ + M +S +
Sbjct: 551 LCRKA--------------------------------------VKTLLMDKSVKHIE--- 569
Query: 603 RITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
++ L+ LG R+D ++ RV G GL WT GG++ +E +
Sbjct: 570 -------INADNLKDYLGVQRYDYGRADSENRV---GQVTGLAWTEVGGDLLTIETACVP 619
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHFPAGAV 718
GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H P GA
Sbjct: 620 GKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHVHVPEGAT 673
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR GIK
Sbjct: 674 PKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKT 733
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
V++P+ N +DL E+P V+A L+I KR+E+VL A + P+
Sbjct: 734 VLIPDENKRDLEEIPENVIADLDIHPVKRIEEVLALALQ-NAPY 776
>gi|148548675|ref|YP_001268777.1| ATP-dependent protease La [Pseudomonas putida F1]
gi|148512733|gb|ABQ79593.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Pseudomonas putida F1]
Length = 798
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 466/777 (59%), Gaps = 85/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ S + A +S ++ T +
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFSEVEGHIRAEVSLIDETDTAERE 122
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q ++ L ++ A E++S L + G +L D
Sbjct: 123 SEVFVRTLLSQFEQYVQLGKKVPA---EVLSSLNSIDEPG-------------RLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIVDLTTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALTKAQAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW KA ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYLDWLVQVPW-KAQSKVRLDLTKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L+P+ + +GL E L + + +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKEELDVDISAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R + Q+Q + +S+
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKVVKEHTGQKQVKVKVASE---------------- 568
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
LE +LG +F AE+ G
Sbjct: 569 ---------------------------------QLEHLLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|404493622|ref|YP_006717728.1| ATP-dependent Lon protease (La) [Pelobacter carbinolicus DSM 2380]
gi|123573890|sp|Q3A334.1|LON2_PELCD RecName: Full=Lon protease 2; AltName: Full=ATP-dependent protease
La 2
gi|77545661|gb|ABA89223.1| ATP-dependent Lon protease (La) [Pelobacter carbinolicus DSM 2380]
Length = 796
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 317/753 (42%), Positives = 452/753 (60%), Gaps = 77/753 (10%)
Query: 75 EGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLE 134
EG C+ ++ G I++L++T M V P+ + +A +I++L
Sbjct: 85 EGGCKIILE-----GVNRVRLITTLQVTPFAMASVSLIPERENRNSVAQALMQSIIALLR 139
Query: 135 QKQKTGGRTKVLLETVPIH---------KLADIFVASFEISFEEQLVMLDSVDLKVRLSK 185
Q G +L H KLAD + ++Q +L+++D RL
Sbjct: 140 VAQSLGQ----MLPEDAHHAIDRIDESGKLADSLAVYLNMEVKDQQRLLETLDPLERLKD 195
Query: 186 ATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALE 245
+ +Q ++ + Q +SQKE LLR+Q++ I+ +LG+ D + D+
Sbjct: 196 VYLFLTTEIQKMQARGGGSADRSRQAVRSQKEHLLREQLKHIQNQLGEEDPHQADIRQFR 255
Query: 246 RKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLK 305
+QS MP + +KEL RL+++ P P YT +R Y+E + ++PW++ + +I LD+
Sbjct: 256 SIVQSDEMPEVVRSVAEKELARLERINPSSPEYTVARSYVEYLCNMPWQRGTSDI-LDID 314
Query: 306 AAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALG 365
A++ LD DHY LV VK+RI+E+LAV LK +GP+LCFVGPPGVGKTSL SIA +LG
Sbjct: 315 RAQQTLDDDHYDLVEVKERILEFLAVHSLKSSLKGPILCFVGPPGVGKTSLGRSIARSLG 374
Query: 366 RKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRG 425
RKFIRISLGG+KDEA+IRGHRRTYIG+MPGR+I + R G NPV +LDE+DK G D RG
Sbjct: 375 RKFIRISLGGMKDEAEIRGHRRTYIGAMPGRIIQEICRAGANNPVFMLDEVDKIGQDFRG 434
Query: 426 DPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGY 485
DPA+ALLEVLDPEQN +F DHYL+VPFDLS V+F+ TAN +PPPL DRMEV+ LPGY
Sbjct: 435 DPAAALLEVLDPEQNYSFTDHYLDVPFDLSHVMFITTANVMDTVPPPLRDRMEVLRLPGY 494
Query: 486 TPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALAR 545
+ EEKL+IA ++LIP+ + ++GL LQ E V +I+ YTREAGVR+++R +A++ R
Sbjct: 495 SDEEKLQIAFKYLIPKQVSENGLDKHPLQFEEQAVLKIIKNYTREAGVRSIDRQIASVCR 554
Query: 546 AAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
A VA+ KD
Sbjct: 555 KVAKAVAQ---------GKD---------------------------------------- 565
Query: 606 SPLVVDEAMLEKVLGPPRFDDREAAE--RVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+P V+ +EK+LGP ++ AAE RV G+ GL WT GG++ FVE + M G+
Sbjct: 566 APEVIRSDQVEKMLGPRKYFSDVAAEEDRV---GVVTGLAWTESGGDIIFVEVSTMAGRK 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG LG+V++ESA+ AL++VRA D + A+ NL DIH+H P+GA+PKDGP
Sbjct: 623 DLTLTGSLGNVMQESAKTALSYVRAHHADFGIDAQVFENL----DIHLHVPSGAIPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAGVT+ TAL+S +R+ R + AMTGE+TL G +LP+GGVK+K+LAA R G+ V+LPE
Sbjct: 679 SAGVTIATALISQLTRRPARRNVAMTGELTLTGRILPIGGVKEKVLAARRAGVTTVLLPE 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
RN ++L E+ +LA + ++L + +V+
Sbjct: 739 RNRENLKELDDHILAEMTVLLVDNLSEVVAHTL 771
>gi|374312109|ref|YP_005058539.1| anti-sigma H sporulation factor LonB [Granulicella mallensis
MP5ACTX8]
gi|358754119|gb|AEU37509.1| anti-sigma H sporulation factor, LonB [Granulicella mallensis
MP5ACTX8]
Length = 809
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 315/766 (41%), Positives = 463/766 (60%), Gaps = 68/766 (8%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ + V P G + V++EG+ R ++ ++ A + + + +E+ Q
Sbjct: 81 NIVQSVRMPDGNIK--VLVEGVERARASAVNDDDGFFVATVRT---SLVELTPTPQTEQL 135
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ Q +L L Q+ T L T KLAD+ A+ ++S EE+ +L+
Sbjct: 136 VVRVHQLFDQYNKLQQSLNQE------TTAALRTDEPAKLADVIAANLQLSIEEKQQILE 189
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D +VRLS+ + +D ++ + + I+ +V+ Q+ ++QKE+ L ++++AI++ELG +
Sbjct: 190 VFDPEVRLSRIADTLDIAIEKLNMDRTISSRVKRQMERAQKEYYLNEKIKAIQKELGRGE 249
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
E D L++K++ AGM + + + +EL++L+ M P T SR YL+ + +PW+K
Sbjct: 250 KSEFD--ELKKKIEEAGMTAEVKEKALQELKKLEAMPPMSAESTVSRNYLDWLLAVPWKK 307
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+EI + A++ L+ DHYGL ++K RI+E+LAVR+L + +G +LCF GPPGVGKTS
Sbjct: 308 RSKEIR-SIANAEQTLNEDHYGLEKIKDRILEFLAVRQLVKNPKGSILCFAGPPGVGKTS 366
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRKF+R+SLGGV+DEA+IRGHRRTYIG++PG++I +K+ G NPV++LDE
Sbjct: 367 LGMSIAKATGRKFVRMSLGGVRDEAEIRGHRRTYIGALPGQIIQSMKKAGTKNPVIMLDE 426
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD RGDPASALLEVLDPEQN TF DHYL+V +DLS+V+FVATAN IP PL D
Sbjct: 427 IDKMASDFRGDPASALLEVLDPEQNNTFQDHYLDVEYDLSQVLFVATANVLHTIPGPLQD 486
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME++ L GYT EKL IA ++L+ + L+ GL +E + + ++ +I+ YTREAGVRN
Sbjct: 487 RMEILRLTGYTEVEKLEIAKQYLVKKQLEATGLNAEQISFTDDALREIIRNYTREAGVRN 546
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER + L R A KV E S
Sbjct: 547 LEREIGNLCRKVARKVVEN---------------------------------------SA 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
H + VV +L +LG R+ D + E+ + G+ GL WT GG + E
Sbjct: 568 HTI----------VVTPEVLNDLLGVARYRDSQVQEK-SEVGLVTGLAWTEMGGSILQTE 616
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ GKG++ TGQLGDV++ESAQ ALT++R+R+ L L + + DIH+H P
Sbjct: 617 VQVLDGKGKMTATGQLGDVMQESAQAALTYIRSRSQHLGL----PRDFYRSIDIHVHVPE 672
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA+PKDGPSAG+TL TAL S ++ VR D AMTGE+TLRG VLP+GG+K+K+LAAHR G
Sbjct: 673 GAIPKDGPSAGITLATALASALTKIAVRRDIAMTGEITLRGKVLPIGGLKEKLLAAHRAG 732
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
I ILP N KDL + P + +++++ ++M++VLE A P
Sbjct: 733 IFEAILPADNRKDLADFPELIKSTMKLHWVEQMDEVLEIALTSKLP 778
>gi|311280664|ref|YP_003942895.1| ATP-dependent protease La [Enterobacter cloacae SCF1]
gi|308749859|gb|ADO49611.1| ATP-dependent protease La [Enterobacter cloacae SCF1]
Length = 784
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGDHFSAKAEYLDSPSIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+R++ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRRIDAAKMPKEAKEKAESELQKLKMMSPMSAEATVVRGYIEWMVQVPWNT 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKKGELTVEDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------FLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGTAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLALALQN 773
>gi|375259346|ref|YP_005018516.1| DNA-binding ATP-dependent protease La [Klebsiella oxytoca KCTC
1686]
gi|397656327|ref|YP_006497029.1| ATP-dependent protease La [Klebsiella oxytoca E718]
gi|402843107|ref|ZP_10891509.1| endopeptidase La [Klebsiella sp. OBRC7]
gi|423101610|ref|ZP_17089312.1| lon protease [Klebsiella oxytoca 10-5242]
gi|423106998|ref|ZP_17094693.1| lon protease [Klebsiella oxytoca 10-5243]
gi|423112883|ref|ZP_17100574.1| lon protease [Klebsiella oxytoca 10-5245]
gi|423127777|ref|ZP_17115456.1| lon protease [Klebsiella oxytoca 10-5250]
gi|365908824|gb|AEX04277.1| DNA-binding ATP-dependent protease La [Klebsiella oxytoca KCTC
1686]
gi|376389124|gb|EHT01816.1| lon protease [Klebsiella oxytoca 10-5243]
gi|376390377|gb|EHT03063.1| lon protease [Klebsiella oxytoca 10-5245]
gi|376391398|gb|EHT04077.1| lon protease [Klebsiella oxytoca 10-5242]
gi|376394816|gb|EHT07466.1| lon protease [Klebsiella oxytoca 10-5250]
gi|394344933|gb|AFN31054.1| ATP-dependent protease La [Klebsiella oxytoca E718]
gi|402277738|gb|EJU26806.1| endopeptidase La [Klebsiella sp. OBRC7]
Length = 784
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 328/765 (42%), Positives = 463/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+ + ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLSKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG R+D ++ RV G GL WT GG++
Sbjct: 576 HD--------------------FLGVQRYDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VR+RA L + + + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRSRADKLGINS----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLALALQN 773
>gi|442611655|ref|ZP_21026361.1| ATP-dependent protease La [Pseudoalteromonas luteoviolacea B = ATCC
29581]
gi|441747583|emb|CCQ12423.1| ATP-dependent protease La [Pseudoalteromonas luteoviolacea B = ATCC
29581]
Length = 783
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 332/785 (42%), Positives = 470/785 (59%), Gaps = 88/785 (11%)
Query: 42 VIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEM 101
V ++ G A L L ++ P G V V++EG R + + ++ A +E
Sbjct: 65 VDELYSMGTVATVLQL---LKLPDGTVK--VLVEGNQRAKLVKFINTDEFFQAEAEFVES 119
Query: 102 TKI-EMEQ-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIH 153
T I E EQ + Q ++ L+++ + IS L+ +
Sbjct: 120 THIDEQEQDIFIRSAISQFEGYVKLNKKIPPEVLTSISGLDDAAR--------------- 164
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
LAD A + E+ +L+ D+ RL L++ + ++V +KI +V+ Q+ K
Sbjct: 165 -LADTMAAHMPLKVVEKQKVLEISDVTERLEYLMALMEGEIDLLQVEKKIRARVKKQMEK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELG+ DD D+ +++++ AGMP EL +LK M P
Sbjct: 224 SQREYYLNEQMKAIQKELGELDDVPDEFETIKKRIGDAGMPKEASDKAMAELNKLKMMSP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + ++PW+K S+ + DL A++ L+SDHYGL +VK+RI+EYLAV++
Sbjct: 284 MSAEATVVRSYIDTLINVPWKKRSK-VKKDLAGAEDILNSDHYGLEKVKERIVEYLAVQQ 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 343 RTNKLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSM 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG+LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN F DHYL V +D
Sbjct: 403 PGKLIQSMTKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSNFADHYLEVDYD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N IP PLLDRMEVI L GYT +EKL I+ +HLIP+ + ++GL + +
Sbjct: 463 LSDVMFVATSNSFN-IPGPLLDRMEVIRLSGYTEDEKLNISKQHLIPKQVKRNGLKEKEI 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
I ++ + +I+ YTREAGVRNLER ++ L R A ++ L
Sbjct: 522 TIEDSAIIGIIRFYTREAGVRNLEREISKLCRKAVKEI---------------------L 560
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAE 631
L+ + S + +D L LG RFD E +
Sbjct: 561 LN---------------------------KTISHVNIDGENLGHYLGVQRFDYGKAEDGD 593
Query: 632 RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
R+ G GL WT GG++ +E+ A+ GKG+L TG LGDV++ES Q A+T VR+RA
Sbjct: 594 RI---GQVTGLAWTEVGGDLLTIESAAVPGKGKLTFTGSLGDVMQESIQAAMTVVRSRAE 650
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
L++ A + + RDIH+H P GA PKDGPSAG+ +VTALVS + VR+D AMTGE
Sbjct: 651 KLRINA----DFYEKRDIHVHVPEGATPKDGPSAGIAMVTALVSSLTGNPVRSDVAMTGE 706
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+K+K+LAAHR GIKRV++P++N +DL E+PA VL L+I ++DV
Sbjct: 707 ITLRGEVLPIGGLKEKLLAAHRGGIKRVLIPKKNERDLKEIPANVLEGLDIHPVTWIDDV 766
Query: 812 LEQAF 816
L+ A
Sbjct: 767 LKLAL 771
>gi|406965896|gb|EKD91483.1| hypothetical protein ACD_30C00005G0051 [uncultured bacterium]
Length = 803
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 302/645 (46%), Positives = 408/645 (63%), Gaps = 56/645 (8%)
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L+ V RL + +EL+ + ++ + +++KI+ + ++S+ KE +LR+QMR+I+EELG
Sbjct: 193 ILEMVSAADRLQRVSELLAKEIRILEISQKISSHTQERVSRMTKEAILREQMRSIEEELG 252
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
++ ++ + + E K++ A MP + + KEL RL KM P R YLE + DLP
Sbjct: 253 ESGENVE-IREFELKIRKANMPKEVREKAMKELSRLSKMSSYNPEAAYIRNYLEWLTDLP 311
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W K++ + L++K ++E LD +HYGL +VK+R++EYLAV KL GP+LCFVGPPG G
Sbjct: 312 W-KSAGKTKLNMKKSQEILDDEHYGLKKVKERVMEYLAVYKLAGKLHGPILCFVGPPGTG 370
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTS+ SIA ALGRKF+++SLGG++DEA+IRGHRRTY+GSMPGR+I +K+ G NPV +
Sbjct: 371 KTSIGKSIAKALGRKFVKVSLGGIRDEAEIRGHRRTYVGSMPGRVIQSIKQAGTSNPVFM 430
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK G+D RGDP++ALLE LDPEQN +F+DHYL VP+DLS V+F+ TAN IPP
Sbjct: 431 LDEIDKIGADYRGDPSAALLEALDPEQNNSFSDHYLEVPYDLSNVMFITTANMLDTIPPA 490
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF-LQIPEAMVKLVIQRYTREA 531
L DR+EVI PGYT EEK IA RHL+P+VL HGL + + + + VI YTREA
Sbjct: 491 LRDRLEVIPYPGYTREEKFNIAKRHLVPKVLGSHGLPEKLKIGFDDDAIHQVIDGYTREA 550
Query: 532 GVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPM 591
GVR LER L+A+ R A K AE
Sbjct: 551 GVRGLERELSAVVRKIARKYAEG------------------------------------- 573
Query: 592 GESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEV 651
E+ + IT E + K+LGP +F E AE G S GL W+ GG V
Sbjct: 574 -----EIKKEYEIT------EQEIRKLLGPVKFIP-ELAEIEDMVGASTGLAWSEVGGSV 621
Query: 652 QFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHI 711
F+E T M GKG + LTGQLG+V+KESAQ A+++VR + L + D+H+
Sbjct: 622 MFIEVTLMPGKGAVQLTGQLGEVMKESAQAAMSYVRTNWFRMGLPEK----FFHKVDVHV 677
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GAVPKDGPSAG+ L TA+VS F++ VR D AMTGE+TLRG VL +GG K+K+LAA
Sbjct: 678 HVPEGAVPKDGPSAGIALTTAIVSAFTKIPVRKDVAMTGEVTLRGRVLEIGGFKEKVLAA 737
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
HR G+K VI PE N KDL ++P V+ LE K M++VL+ A
Sbjct: 738 HRAGVKVVIAPEHNKKDLEDIPENVVTDLEFHFVKHMDEVLDLAL 782
>gi|325914924|ref|ZP_08177256.1| ATP-dependent proteinase [Xanthomonas vesicatoria ATCC 35937]
gi|325538817|gb|EGD10481.1| ATP-dependent proteinase [Xanthomonas vesicatoria ATCC 35937]
Length = 823
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 334/777 (42%), Positives = 478/777 (61%), Gaps = 63/777 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G A+ L L ++ P G T V++EGL R +V ++ + + +E +
Sbjct: 69 YTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVELDGALQGQGTEVEASD-- 121
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 122 ----AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+ ++ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLEITEIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ +GMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAESGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL+
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRLVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V+FV
Sbjct: 411 LNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ + +GL E ++I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIAMRYLVPKQIKANGLKPEEIEIGSDAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A LA
Sbjct: 530 QDIVRYYTRESGVRNLEREVAKICRKVVKEIA-------------------------LAG 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
P +T + + + + V+ L+K LG RFD A E G+
Sbjct: 565 ---------PQPAATKAAAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-GLVT 614
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 615 GLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI----D 670
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ +R +RAD AMTGE+TLRG V
Sbjct: 671 VDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSVLTRVPIRADVAMTGEITLRGRVSA 730
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI+ V++P+ N KDL ++PA V L+I+ K +++VL+ A E
Sbjct: 731 IGGLKEKLLAALRGGIRTVLIPDENRKDLADIPANVTRDLKIVPVKWIDEVLDLALE 787
>gi|150016212|ref|YP_001308466.1| ATP-dependent protease La [Clostridium beijerinckii NCIMB 8052]
gi|149902677|gb|ABR33510.1| ATP-dependent protease La [Clostridium beijerinckii NCIMB 8052]
Length = 776
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 294/663 (44%), Positives = 425/663 (64%), Gaps = 60/663 (9%)
Query: 159 FVASFEISFEE-QLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
VAS+ I+ E+ + +L+ VD+ R+ K E + + ++ +KI KV+ ++K QKE
Sbjct: 165 MVASYAITDEKLKQEILEIVDIIKRVEKVLERIKIEISIAKIQKKIANKVKNTVAKEQKE 224
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
F LR+Q+RAI+EELG++D+D+ ++ E K++ A +P+ + + V EL RLK M P
Sbjct: 225 FYLREQLRAIQEELGEDDEDKKEIAKYEEKIKKAKLPNEVKEKVNYELSRLKNMSPTSSE 284
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
+ YL+ + D+PW K ++E ++D+ A+E LD++HYGL VK RIIEYLAV++
Sbjct: 285 GNVVKAYLDWVLDIPWGKNTKE-NIDVTKAREVLDNEHYGLEDVKDRIIEYLAVKQFSKS 343
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC VGPPGVGKTS+A SIA+A+ RK+ RIS+GG+KDEA+IRGHR+TY+G++PGR+
Sbjct: 344 QKGPILCLVGPPGVGKTSIAKSIANAINRKYTRISVGGMKDEAEIRGHRKTYVGAIPGRI 403
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+ +K NP+ML DEIDK S +GDP+ ALLE+LD EQNK F D YL VP DLSKV
Sbjct: 404 VYAMKEAKSMNPLMLFDEIDKISSSYKGDPSDALLEILDSEQNKDFRDSYLEVPMDLSKV 463
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+F+ATAN + IP PLLDRMEVIE+ GYT EEK IA HLIP++ + + + + I +
Sbjct: 464 MFIATANSLETIPRPLLDRMEVIEVSGYTYEEKFNIAKNHLIPKIFKELDIPQDKIDIED 523
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+++VI+ YTRE+GVR LER L++L R ++ ++EQ++ L +++ V +L
Sbjct: 524 DSIRMVIEGYTRESGVRGLERKLSSLIRKVLAEMLKREQKEFLINNESVEKL-------- 575
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
LG F D + ++V G
Sbjct: 576 -----------------------------------------LGKKTF-DFDQIDKVDKVG 593
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+ G+ WT +GG+ +EA M G G+L LTG+LGDV++ESA+ A ++VRA A
Sbjct: 594 VVTGMAWTAYGGDTLPIEAMVMTGSGKLELTGKLGDVMQESARTAYSYVRANAIKF---- 649
Query: 698 EDGMN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
G+N + +DIHIH P GAVPKDGPSAGVT+VTALVS S K+V+ + AMTGE+TL
Sbjct: 650 --GINETFYKEKDIHIHAPEGAVPKDGPSAGVTMVTALVSALSGKKVKHNVAMTGEVTLT 707
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
G VLP+GG+K+K LAA R G+ +I+P+ N KD+ ++P ++ SL II AK + +VL+ A
Sbjct: 708 GRVLPIGGLKEKSLAAFRAGVDTIIIPKENEKDIDKIPNSIRNSLNIISAKEVNEVLKNA 767
Query: 816 FEG 818
G
Sbjct: 768 LIG 770
>gi|149181758|ref|ZP_01860249.1| class III heat-shock ATP-dependent Lon protease [Bacillus sp. SG-1]
gi|148850499|gb|EDL64658.1| class III heat-shock ATP-dependent Lon protease [Bacillus sp. SG-1]
Length = 777
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/766 (40%), Positives = 461/766 (60%), Gaps = 87/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-----------MTKIEMEQVEQD 112
P+G T V++EG+ R V + +Y I + E + + + EQ
Sbjct: 82 PNG--TIRVLVEGIQRAEVSNFTNEEKFYEVNIFTHEDSDEKESETEALMRTLLNYFEQ- 138
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I LS++ A +S +++ GR LADI + + +E+
Sbjct: 139 --YIKLSKKVSAETYSTVSDIDEP----GR------------LADIVASHLPLKMKEKQN 180
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L+++D+K RL + ++ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELG
Sbjct: 181 VLETLDIKERLQLVIQTINNEKEVLNLEKKIGQRVKRSMERTQKEYYLREQMKAIQKELG 240
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D + ++ L +++ A MP ++ K V KEL R +K+ + R Y+E + LP
Sbjct: 241 DKEGKTGEIEELTKRIAEAEMPESVEKTVLKELGRYEKVPTSSAESSVIRNYIEWLISLP 300
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W +E+ DLD+K A+E L+ +H+GL +VK+R++EYLAV+KL RGP+LC GPPGVG
Sbjct: 301 WSAQTED-DLDIKKAEEILNREHFGLEKVKERVLEYLAVQKLTQSLRGPILCLAGPPGVG 359
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSLA S+A +LGR F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV L
Sbjct: 360 KTSLAKSVAESLGRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRVIQGMKKAGTINPVFL 419
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK SD RGDP+SA+LEVLDPEQN F+DHY+ +DLSKV+F+ATAN IP P
Sbjct: 420 LDEIDKMSSDFRGDPSSAMLEVLDPEQNSNFSDHYIEETYDLSKVMFLATANDLSTIPGP 479
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DRME+I + GYT EK+ IA HL+P+ + ++GL LQ+ E ++ V++ YTREAG
Sbjct: 480 LRDRMEIITIAGYTELEKINIAKNHLLPKQIKENGLTKSQLQVREDALEAVVRYYTREAG 539
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VR LER LA L R A + E+++ + + K++
Sbjct: 540 VRGLERQLATLCRKTAKVIVSGEKKKVIITEKNI-------------------------- 573
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
E+ LG +F + AE G++ GL +T+ GG+
Sbjct: 574 -----------------------EEFLGKKKFRYGQ-AESENQVGVATGLAYTSVGGDTL 609
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
+E + GKG+L LTG+LGDV+KESAQ A ++VR++A +L+L N + DIHIH
Sbjct: 610 QIEVSLSPGKGKLVLTGKLGDVMKESAQAAFSYVRSKANELKLEE----NFHEKYDIHIH 665
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
P GAVPKDGPSAG+T+ TALVS + + ++ + MTGE+TLRG VLP+GG+K+K L+AH
Sbjct: 666 VPEGAVPKDGPSAGITIATALVSALTGREIKREIGMTGEITLRGRVLPIGGLKEKTLSAH 725
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
R G+ +ILP N KD+ ++P +V L+ + +E+VLE A G
Sbjct: 726 RAGLTTIILPIDNEKDIDDIPESVRKDLKFVPVSHIEEVLETALVG 771
>gi|58580658|ref|YP_199674.1| ATP-dependent serine proteinase La [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|81311960|sp|Q5H432.1|LON_XANOR RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|58425252|gb|AAW74289.1| ATP-dependent serine proteinase La [Xanthomonas oryzae pv. oryzae
KACC 10331]
Length = 850
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 335/780 (42%), Positives = 478/780 (61%), Gaps = 63/780 (8%)
Query: 43 IHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT 102
+ H G A+ L L ++ P G T V++EGL R +V ++ + + + +E +
Sbjct: 93 VDLHTVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVTVDKVVEQDGALQGQGTEVEAS 147
Query: 103 KIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLAD 157
++P R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 148 D------AREP------REVEAIARSLMSLFEQYVKTNRKLPPELLQTLAGIDEPGRLAD 195
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
+ ++ +L+ D+ RL LVD + ++ ++I +V+ Q+ KSQ+E
Sbjct: 196 TIAPHIGVRLADKQRLLEITDIGERLELLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQRE 255
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 256 YYLNEQMKAIQKELGDLDDVPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAE 315
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + +PW+K ++ + DLK A++ LD+DHYGL +VK+RI+EYLAV+
Sbjct: 316 AAVVRNYLDWLLGVPWKKRTK-VRKDLKVAEDTLDADHYGLDKVKERILEYLAVQSRVKQ 374
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC VGPPGVGKTSL SIA A RKF+R+SLGG++DEA+IRGHRRTY+GSMPGRL
Sbjct: 375 MKGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGIRDEAEIRGHRRTYVGSMPGRL 434
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+ L +VG NP+ LLDEIDK D RGDP+SALLEVLDPEQN +FNDHYL V DLS+V
Sbjct: 435 VQNLNKVGSKNPLFLLDEIDKMSMDFRGDPSSALLEVLDPEQNNSFNDHYLEVDLDLSEV 494
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N IP PLLDRMEVI +PGYT +EKL IAMR+L+P+ + +GL E ++I
Sbjct: 495 MFVATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIAMRYLVPKQIKANGLKPEEIEIGG 553
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
++ +++ YTRE+GVRNLER +A + R ++A
Sbjct: 554 DAIQDIVRYYTRESGVRNLEREVAKICRKVVKEIA------------------------- 588
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
LA P + V+ + + + V+ L+K LG RFD A E G
Sbjct: 589 LAG---------PQPAAKKAVAKKGKPKALVTVNAKNLDKYLGVRRFDFGRAEEENEI-G 638
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+ GL WT GGE+ VE+T + GKG L LTGQLG+V+KESA AL+ VR+RA L +
Sbjct: 639 LVTGLAWTEVGGELLQVESTLVPGKGNLILTGQLGNVMKESASAALSVVRSRAERLGI-- 696
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
++ LQ +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ +RAD AMTGE+TLRG
Sbjct: 697 --DVDFLQKQDVHVHVPDGATPKDGPSAGIAMVTSLVSVLTKVPIRADVAMTGEITLRGR 754
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
V +GG+K+K+LAA R GI+ V++P N KDL ++PA V L+I+ K +++VL+ A E
Sbjct: 755 VSAIGGLKEKLLAALRGGIRTVLIPGENRKDLADIPANVTRDLKIVPVKWIDEVLDLALE 814
>gi|146282420|ref|YP_001172573.1| ATP-dependent protease [Pseudomonas stutzeri A1501]
gi|145570625|gb|ABP79731.1| ATP-dependent protease [Pseudomonas stutzeri A1501]
Length = 798
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 336/774 (43%), Positives = 466/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R ++ + A +S +E
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGVIERFVEVDDHCRAEVSLIE-------- 114
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
E D D +R+ + L+S EQ + G + +VL I +L D A
Sbjct: 115 -EADVD----ARESEVFTRSLLSQFEQYVQLGKKVPAEVLSSLSSIDEPARLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQQILEITDLPARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+ + + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDIDEGHNEVDELKKRIENAGLSKDAYAKAQAELNKLKQMSPMSAEATVVRT 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
Y++ + ++PW KA+ ++ LDL A+E LD+DHYGL VK RI+EYLAV+K +GPVL
Sbjct: 290 YIDWLVNVPW-KAASKVRLDLAKAEEVLDADHYGLEEVKDRILEYLAVQKRVKKLKGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA + RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIARSTNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ TA
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTA 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IP PLLDRMEVI LPGYT +EK+ IA R+L P+ ++ +GL L+ EA ++ +
Sbjct: 469 N-SMNIPAPLLDRMEVIRLPGYTEDEKVNIATRYLAPKQIEANGLKKGELEFQEAAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR+LER LA + R KV ++
Sbjct: 528 IRYYTREAGVRSLERQLAKVCR----KVVKE----------------------------- 554
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
H F + +VD LE LG +F AE+ G GL
Sbjct: 555 ------------HAAEKRFHV----IVDADSLEHFLGVRKF-RYGLAEQQDQVGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG L TG LG+V+ ES ALT VR+RA L + A +
Sbjct: 598 WTQVGGELLTIEAAVVPGKGRLTKTGSLGEVMGESITAALTVVRSRAVSLGIAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ +DIHIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKQDIHIHVPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N +DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENQRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|380510630|ref|ZP_09854037.1| ATP-dependent serine proteinase La [Xanthomonas sacchari NCPPB
4393]
Length = 822
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 337/777 (43%), Positives = 481/777 (61%), Gaps = 58/777 (7%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A+ L L ++ P G T V++EGL R SV +++ R +L+ E
Sbjct: 69 YNVGTLAQVLQL---LKLPDG--TIKVLVEGLSRVSVDKVAERD-------GALQGEGRE 116
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLADIFV 160
++ E + R+ +A A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 117 IDAAESREE-----REVEAIARSLMSLFEQYVKTNRKLPPELLQTLSGIDEPGRLADTIA 171
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L+++++ RL LVD + ++ ++I +V+ Q+ KSQ+E+ L
Sbjct: 172 AHIGVRLADKQRLLETLEVGERLEMLVGLVDGEIDVQQLEKRIRGRVKSQMEKSQREYYL 231
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD DD +L L RK+ AGMP + + EL +LK+M P
Sbjct: 232 NEQMKAIQKELGDLDDAPGELEELARKIAEAGMPKPVETKAKAELNKLKQMSPMSAEAAV 291
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K S+ + DLK A+E LD+DHYGL +VK RI+EYLAV+ +G
Sbjct: 292 VRNYLDWLLGVPWKKRSK-VRKDLKVAQETLDADHYGLEKVKDRILEYLAVQSRVKQMKG 350
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA+IRGHRRTY+GSMPGR++
Sbjct: 351 PILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEIRGHRRTYVGSMPGRIVQN 410
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
L +VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN FNDHYL V DLS+V+FV
Sbjct: 411 LNKVGSKNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNNAFNDHYLEVDLDLSEVMFV 470
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ L +GL + L+I +
Sbjct: 471 ATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQLKANGLKQDELEIGADAI 529
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER +A + R ++A + A P+ K + G+ D
Sbjct: 530 RDIVRYYTRESGVRNLEREVAKICRKVVKEIALAGPQPAAPAKKAAAKKGAVRKDK---- 585
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
R++ V L+K LG R+D A E+ G+
Sbjct: 586 ---------------------ARVS----VGSKNLDKYLGVRRYDFGRAEEQNEI-GLVT 619
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +E+T + GKG + LTGQLGDV+KESA AL+ VR+RA L + A
Sbjct: 620 GLAWTEVGGDLLQIESTLVPGKGAVILTGQLGDVMKESASAALSVVRSRAERLGIEA--- 676
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ LQ D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ V+++ AMTGE+TLRG V
Sbjct: 677 -DFLQKHDVHLHVPDGATPKDGPSAGIAMVTSLVSMLTKVPVKSEVAMTGEITLRGRVSA 735
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAA R GI+ V++PE N KDL ++P V L+I+ K +++VL+ A E
Sbjct: 736 IGGLKEKLLAALRGGIRTVLIPEENRKDLADIPENVTRDLKIVPVKWIDEVLDLALE 792
>gi|222526350|ref|YP_002570821.1| ATP-dependent protease La [Chloroflexus sp. Y-400-fl]
gi|222450229|gb|ACM54495.1| ATP-dependent protease La [Chloroflexus sp. Y-400-fl]
Length = 825
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/664 (46%), Positives = 421/664 (63%), Gaps = 52/664 (7%)
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LADI F+++L +L+++D RL KA ++ R L+ +++ KI Q L +S
Sbjct: 183 LADIVTWGPAFDFKDRLEILNTLDPVERLRKAYLVLARQLELLKLRVKIQQDTREVLDQS 242
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
Q+E+ LR+Q+R I+ ELG+++D +D + L R++ P + EL+RL +
Sbjct: 243 QREYFLREQLRVIRRELGEDEDGDDPIDELRRRIHEMNAPEYVKNQALHELKRLSQQGMH 302
Query: 275 QPGYTSSRVYLELIADLPWEKASEEI-DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
P R YL+ I LPW A EE+ ++ + AK+ LD DHYGL +VK+RI+EYLAV K
Sbjct: 303 SPEAGVIRTYLDWILSLPW--ADEELPEISITEAKKVLDEDHYGLEKVKERILEYLAVLK 360
Query: 334 LKPDA-RGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGS 392
L + RGP+LCFVGPPGVGKTSL SIA ALGRKF+R SLGGV+DEA+IRGHRRTYIG+
Sbjct: 361 LAGNKMRGPILCFVGPPGVGKTSLGRSIARALGRKFVRTSLGGVRDEAEIRGHRRTYIGA 420
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
+PGR+I +K +PV +LDE+DK G D RGDP SALLEVLDPEQN F+DHYL +PF
Sbjct: 421 LPGRIIQAMKTAKSRSPVYILDEVDKIGIDFRGDPTSALLEVLDPEQNNAFSDHYLELPF 480
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLSKVIF+ATAN+ +PIP PL DRME+IE+ GYT +EK+ IA LIP+ + HGL +
Sbjct: 481 DLSKVIFIATANQLEPIPLPLRDRMEIIEISGYTEDEKMEIARGFLIPKQREFHGLREDQ 540
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSP 572
++ + + +I+ YTREAGVR LER +A+L R A KVAEQ +
Sbjct: 541 IEFTDGAIIKLIREYTREAGVRGLEREIASLCRKVARKVAEQSE---------------- 584
Query: 573 LLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAER 632
DG+ V+DEA + + LGP RF E+
Sbjct: 585 -----ATDGS----------------------VQKFVIDEAAVLEYLGPERFTFGLVEEK 617
Query: 633 VAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATD 692
G++ G+ WT+ GG++ +E +GKG+L LTGQLG+V+KESAQ A+++VR+RA D
Sbjct: 618 DEV-GVATGVAWTSAGGDILNIEVLPFKGKGQLQLTGQLGEVMKESAQAAVSYVRSRAAD 676
Query: 693 LQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEM 752
+ + + +IHIH P G+VPKDGPSAG+TL TAL+S + VR D AMTGE+
Sbjct: 677 FGI----DPAIFEETNIHIHIPEGSVPKDGPSAGITLTTALISALTGTPVRRDVAMTGEV 732
Query: 753 TLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
TLRG VLP+GG+K+K LAAHR GI+ ILP+ N KD+ E+P V L +I M++VL
Sbjct: 733 TLRGKVLPIGGLKEKTLAAHRAGIRTFILPKENAKDISELPEKVRRELNLIPVSSMDEVL 792
Query: 813 EQAF 816
+ A
Sbjct: 793 QIAL 796
>gi|411009095|ref|ZP_11385424.1| ATP-dependent protease La [Aeromonas aquariorum AAK1]
Length = 784
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 307/664 (46%), Positives = 427/664 (64%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + E++ +L+ + R+ +++ + ++V ++I +V+ Q+ K
Sbjct: 164 RLADTMAAHMPLKLEDKQKVLEIASVSERIEFLMAMMESEIDLLQVEKRIRSRVKKQMEK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELG+ +D D+ AL RK++ AGMP + + Q EL +LK M P
Sbjct: 224 SQREYYLNEQMKAIQKELGELEDSPDEFEALNRKIEEAGMPEDAREKAQAELAKLKMMSP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + +PW KA ++ DL A++ LD+DHYGL +VK RI+EYLAV+
Sbjct: 284 MSAEATVVRSYVDWMVQVPW-KARSKVKKDLGKAQDVLDADHYGLEKVKDRILEYLAVQA 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 343 RVNKLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSM 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG+LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN +FNDHYL V +D
Sbjct: 403 PGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNNSFNDHYLEVDYD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + + ++GL +
Sbjct: 463 LSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLVSKQIQRNGLKESEI 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
I ++ + VI+ YTREAGVR+LER ++ + R A ++ L
Sbjct: 522 TIEDSALVGVIRYYTREAGVRSLEREISKICRKAVKRI---------------------L 560
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LD + + V++ L++ LG RFD +A ++
Sbjct: 561 LDKSIKH---------------------------VQVNQENLKEFLGVQRFDYGKATDQN 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG++ +E T M GKG+L TG LGDV++ES Q A+T VRARA L
Sbjct: 594 QV-GQVCGLAWTEVGGDLLTIETTNMPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEKL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
++ A + + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+T
Sbjct: 653 RINA----DFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVRADVAMTGEIT 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAAHR GIKRV++P+ N +DL E+P V LEI + +++VLE
Sbjct: 709 LRGEVLPIGGLKEKLLAAHRGGIKRVLIPKENERDLEEIPDNVKQDLEIHPVRWIDEVLE 768
Query: 814 QAFE 817
A +
Sbjct: 769 LALQ 772
>gi|410457672|ref|ZP_11311463.1| ATP-dependent protease La [Bacillus azotoformans LMG 9581]
gi|409933657|gb|EKN70578.1| ATP-dependent protease La [Bacillus azotoformans LMG 9581]
Length = 774
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 299/667 (44%), Positives = 429/667 (64%), Gaps = 59/667 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
++ADI + + +E+ +L+++D+K RL K L++ + + + +KI Q+V+ + +
Sbjct: 162 RMADIISSHLSLKIKEKQDILETLDVKERLEKMIVLINNEKEILNLEKKIGQRVKRSIER 221
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+ LR+QM+AI++ELGD + ++ K++ AGMP + + KE+ R +K+
Sbjct: 222 TQKEYYLREQMKAIQKELGDKEGKTGEVETFRDKIEQAGMPERVKETALKEVDRFEKVPA 281
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
+ R Y++ + LPW K + + +LD+K A+ LD+DHYGL +VK+R++EYLAV+K
Sbjct: 282 SSAESSVIRNYIDWLLALPWHKETTD-NLDIKNAENVLDADHYGLEKVKERVLEYLAVQK 340
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LC VGPPGVGKTSLA SI+ ALGR F+R+SLGGV+DEA+IRGHRRTY+G+M
Sbjct: 341 LTKSLKGPILCLVGPPGVGKTSLARSISKALGRNFVRVSLGGVRDEAEIRGHRRTYVGAM 400
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I G+K+ G NP+ LLDEIDK SD RGDP+SA+LEVLDPEQN F+DHY+ +D
Sbjct: 401 PGRIIQGMKKAGTINPLFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNANFSDHYIEETYD 460
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+F+ATAN IP PLLDRMEVI + GYT EKL IA HL+P+ + HGL L
Sbjct: 461 LSKVMFIATANNIGTIPGPLLDRMEVISIAGYTEVEKLHIAKDHLLPKQVKAHGLEKGKL 520
Query: 514 QI-PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGS 571
QI EA++K VI+ YTREAGVR+LER +A L R AA + +++++ + + K + LG
Sbjct: 521 QIRDEALIK-VIRTYTREAGVRSLERQIANLCRKAAKIIVTEDRKRIIITEKSLEEFLGK 579
Query: 572 PLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAE 631
P RF E +
Sbjct: 580 PRF------------------------------------------------RFGQAEIQD 591
Query: 632 RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
+V G + GL +T GG+ +E + + GKG+L LTG+LG+V+KESAQ A +++R+RA
Sbjct: 592 QV---GAATGLAYTTAGGDTLAIEVSVVPGKGKLTLTGKLGEVMKESAQAAFSYIRSRAK 648
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
+L + E + DIHIH P GA+PKDGPSAG+T+ TALVS + + VR + MTGE
Sbjct: 649 ELNIDPE----FHEKNDIHIHVPEGAIPKDGPSAGITMATALVSALTGRAVRKEVGMTGE 704
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+K+K LAAHR G+K +I+P+ N KDL ++P +V L I + +++V
Sbjct: 705 ITLRGRVLPIGGLKEKSLAAHRAGLKTIIIPKENEKDLEDIPESVRDDLMYIPVEHLDEV 764
Query: 812 LEQAFEG 818
LE A G
Sbjct: 765 LEHALTG 771
>gi|423118965|ref|ZP_17106649.1| lon protease [Klebsiella oxytoca 10-5246]
gi|376399611|gb|EHT12225.1| lon protease [Klebsiella oxytoca 10-5246]
Length = 784
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 327/765 (42%), Positives = 461/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPAIDEREQEVLVRTAIGQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDINERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-S 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+ + ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLSKQIERNALKKGELTVEDSAIVGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L + G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLK-------HITINGDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG R+D ++ RV G GL WT GG++
Sbjct: 576 HD--------------------FLGVQRYDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VR+RA L + + + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRSRADKLGINS----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|345868429|ref|ZP_08820416.1| ATP-dependent protease La [Bizionia argentinensis JUB59]
gi|344047137|gb|EGV42774.1| ATP-dependent protease La [Bizionia argentinensis JUB59]
Length = 816
Score = 569 bits (1467), Expect = e-159, Method: Compositional matrix adjust.
Identities = 315/779 (40%), Positives = 468/779 (60%), Gaps = 83/779 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G AR L + ++ P G T V+++G RF ++E+ T Y A I + E
Sbjct: 102 HQTGTVARILKV---LKMPDGNTT--VIIQGKKRFKIKEVLTEDPYIKATIEEVP----E 152
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FE 164
+ EQ+ +F A+ K ++++I E ++ + + FV+S
Sbjct: 153 AKPAEQNKEFEAIIDSIKDLSLQII---EDSPNIPSEASFAIKNIQSNSFLINFVSSNMN 209
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+S E+ +L++ DLK R + + ++ Q + + I KV+ +++ Q+E+ L+QQM
Sbjct: 210 LSVTEKQSLLETNDLKDRALETLKYMNMEFQKLELKNDIQSKVQSDMNQQQREYFLQQQM 269
Query: 225 RAIKEELG--DNDDDEDDLVALERKMQSAGMPSNIW-----KHVQKELRRLKKMQPQQPG 277
+ I+EELG ++D++ + + A +KM+ W KH +KEL ++++M PQ
Sbjct: 270 KTIQEELGGVNHDEEVEQMRARSKKMK--------WGEKEGKHFEKELAKMQRMNPQVAE 321
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
Y+ R YLEL DLPW K S++ DLK A+ LD DHYGL VK+RIIE+LAV KL+ D
Sbjct: 322 YSIQRNYLELFLDLPWNKFSKD-KFDLKRAQRILDRDHYGLDDVKRRIIEHLAVVKLRDD 380
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+ P+LC GPPGVGKTSL S+A ALGR+++R+SLGG++DEA+IRGHR+TYIG+MPGR+
Sbjct: 381 MKSPILCLYGPPGVGKTSLGKSVAEALGREYVRMSLGGLRDEAEIRGHRKTYIGAMPGRI 440
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
I LK+ G NPV +LDEIDK + +GDP+SA+LEVLDPEQN F+D++L + FDLSKV
Sbjct: 441 IQSLKKAGTSNPVFVLDEIDKLANSNQGDPSSAMLEVLDPEQNSEFHDNFLEMGFDLSKV 500
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+F+AT+N I P LLDRME+I + GYT EEK+ IA RHL+P+ L +HGL + L+I +
Sbjct: 501 MFIATSNSLSTIQPALLDRMEIINVTGYTIEEKVEIAKRHLLPKQLKEHGLTDKHLKIAK 560
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
++ +++ YTRE+GVR LE+ LA + R AA +A E+E A+
Sbjct: 561 PQLEKIVEGYTRESGVRGLEKQLAKMVRYAAKNIA-MEEEYAIK---------------- 603
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
V +E ++E + GP D+ VA G
Sbjct: 604 -------------------------------VTNEIIIEVLGGPKMLRDKYENNNVA--G 630
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+ GL WT GG++ F+E+ +GKG L +TG LG V+KESA IA+ ++++ A L L
Sbjct: 631 VVTGLAWTRVGGDILFIESILSKGKGTLTITGNLGKVMKESATIAMEYLKSNAEALGL-- 688
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
++ + ++HIH P GA PKDGPSAGV+++T+LVSLF++++V+++ AMTGE+TLRG
Sbjct: 689 --DPDIFEKYNVHIHVPEGATPKDGPSAGVSMLTSLVSLFTQRKVKSNLAMTGEITLRGK 746
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
VLPVGG+K+KILAA R I ++L E N +D+ E+ A L L M DV++ A
Sbjct: 747 VLPVGGIKEKILAAKRARITEILLCEDNRRDIEEIKADYLKGLTFHYVSDMSDVIKLAL 805
>gi|28569594|gb|AAO43974.1| Lon protease [Brevibacillus thermoruber]
Length = 779
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 314/761 (41%), Positives = 458/761 (60%), Gaps = 81/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVE--------QDPDF 115
P+G T V++EGL R + E + ++ I+ LE K + +VE +
Sbjct: 83 PNG--TIRVLVEGLQRARIDEYIRQDDFFQVSITYLEEEKADENEVEALMRAVLSHFEQY 140
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I LS++ A+ +S +E+ GR LAD+ + + +++ +L+
Sbjct: 141 IKLSKKISPEALTSVSDIEEP----GR------------LADVIASHLPLKMKDKQEILE 184
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+ ++K RL+ ++++ + + + KI+ +V+ Q+ ++QKE+ LR+QM+AI++ELG+ D
Sbjct: 185 TTNIKERLNILLDILNNEREVLELERKISNRVKKQMERTQKEYYLREQMKAIQKELGEKD 244
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
+ ++ L +++ + P I ++KEL RL+KM R Y++ + LPW +
Sbjct: 245 GRQSEVDELRAQLEKSDAPERIKNKIEKELERLEKMPTTSAEGAVIRTYIDTLLSLPWTR 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+ + +LD+ A++ L+ DHYGL + K+R++EYLAV+KL RGP+LC VGPPGVGKTS
Sbjct: 305 RTVD-NLDIHHAEQVLNEDHYGLEKPKERVLEYLAVQKLVNSMRGPILCLVGPPGVGKTS 363
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
LA SIA AL R+F+RISLGGV+DEA+IRGHRRTY+G++PGR+I G+K+ G NPV LLDE
Sbjct: 364 LARSIARALEREFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGMKQAGTINPVFLLDE 423
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD RGDPASALLEVLDP QN F+DHY+ +DL+ V+F+ TAN IP PLLD
Sbjct: 424 IDKLASDFRGDPASALLEVLDPNQNDKFSDHYIEETYDLTNVMFITTANSTHTIPRPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI + GYT EKL I +L+P+ +++HGLG + LQ+ E + VI++YTREAGVRN
Sbjct: 484 RMEVISIAGYTELEKLHIMRDYLLPKQMEEHGLGRDKLQMNEEAMLKVIRQYTREAGVRN 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
L R A + R AA + E+++ + + K V
Sbjct: 544 LNREAANICRKAARLIVSGEKKRVVVTPKTV----------------------------- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
E +LG PR+ AER G GL WT GG+ VE
Sbjct: 575 --------------------ESLLGKPRY-RYGLAEREDQVGAVTGLAWTQAGGDTLNVE 613
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ + GKG+L LTGQLGDV+KESAQ A +++R+RA + E + DIHIH P
Sbjct: 614 VSILPGKGKLTLTGQLGDVMKESAQAAFSYIRSRAAAWNIDPE----FHEKNDIHIHVPE 669
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA+PKDGPSAG+T+ TALVS + VR + MTGE+TLRG VLP+GG+K+K L+AHR G
Sbjct: 670 GAIPKDGPSAGITIATALVSALTGIPVRKEVGMTGEITLRGRVLPIGGLKEKALSAHRAG 729
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+ VILP+ N KD+ ++P +V L++I + M++VL A
Sbjct: 730 LTTVILPKENEKDIEDIPESVRKELKLITVEHMDEVLRHAL 770
>gi|283784265|ref|YP_003364130.1| ATP-dependent protease La [Citrobacter rodentium ICC168]
gi|282947719|emb|CBG87274.1| ATP-dependent protease La [Citrobacter rodentium ICC168]
Length = 803
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 460/767 (59%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 103 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 160
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 161 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 204
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 205 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 264
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 265 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 323
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 324 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 383
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 384 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 443
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 444 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 502
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 503 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVEDSAIIGIIRYYTREAGVRS 562
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 563 LEREISKLCRKAVKQL---------------------LLDKSLRQ--------------- 586
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+V+D L LG RFD A RV G GL WT GG++
Sbjct: 587 ------------IVIDGDNLHDYLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 631
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 632 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 685
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 686 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 745
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 746 HRGGIKTVLIPYENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 792
>gi|33595711|ref|NP_883354.1| ATP-dependent protease La [Bordetella parapertussis 12822]
gi|427824282|ref|ZP_18991344.1| ATP-dependent protease La [Bordetella bronchiseptica Bbr77]
gi|33565790|emb|CAE36334.1| ATP-dependent protease La [Bordetella parapertussis]
gi|410589547|emb|CCN04619.1| ATP-dependent protease La [Bordetella bronchiseptica Bbr77]
Length = 783
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 326/764 (42%), Positives = 452/764 (59%), Gaps = 76/764 (9%)
Query: 60 GVEKPSGRV------TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP 113
G E P R + ++++G RF V E + AR++ ++ Q E
Sbjct: 73 GTEGPVARYITGQEGAHHLLVQGQARFRVLEFLEGWPFLVARVALVDTPAASDSQTE--- 129
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
A Q K ++ I++L +E+ + LAD+ +I ++ +
Sbjct: 130 ---ARFLQLKQQTIDAIALLPNVPDELADVVRGIESPAL--LADMVTNLIDIKAGQKQDI 184
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L++ DL RL K EL+ L+ +R++++I ++ Q + Q+E +LR+Q+R I++ELG+
Sbjct: 185 LETFDLARRLDKVIELLAARLEVLRLSKEIGERTRAQFDERQRETVLREQLRQIQKELGE 244
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
DD + L+ ++ AGMP + H +KEL RL++M Y R YLE + +LPW
Sbjct: 245 TDDGAAEAAQLKETIEQAGMPEEVLNHARKELSRLQRMGDGSGEYAMLRTYLEWLTELPW 304
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
+ ++ +DL A+ LD DH+GL ++K+RI+EYLAVRKL P+ R P+LCFVGPPGVGK
Sbjct: 305 KHEPQQA-IDLAEARRVLDEDHFGLDKIKRRILEYLAVRKLNPEGRSPILCFVGPPGVGK 363
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSL SIA A GR F R++LGGV DEA+IRGHRRTY+G++PG +I ++R G N V++L
Sbjct: 364 TSLGQSIARATGRAFQRVALGGVHDEAEIRGHRRTYLGALPGNIIQAVRRAGTGNLVLML 423
Query: 414 DEIDKTGS-DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
DEIDK G+ GDP SALLEVLDPEQN F D+YL V +DLS V+F+ TAN +P P
Sbjct: 424 DEIDKLGAGGFHGDPGSALLEVLDPEQNHKFRDNYLAVDYDLSHVMFICTANVLDTVPGP 483
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DRME+I+LPGYT EEK++IA R+LI R L+ +GL E I +A + ++ YTREAG
Sbjct: 484 LRDRMEIIDLPGYTEEEKIQIARRYLIKRQLEANGLRPEQADITDAALAAIVGDYTREAG 543
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VRNLER + ++ R AA++VAE G
Sbjct: 544 VRNLEREIGSVLRHAAMQVAE--------------------------------------G 565
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
++ H + +D A L LGP RF++ E A R + PG++ GL WT GG++
Sbjct: 566 KAGH-----------VSIDTADLGATLGPRRFEN-EVALRTSLPGVATGLAWTPVGGDIL 613
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
F+EA+ + G G L LTGQLGDV+KESAQ ALT + + D L+ DIHIH
Sbjct: 614 FIEASKVPGSGRLILTGQLGDVMKESAQAALTLAKTWSGD----------ALEKVDIHIH 663
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
PAGA PKDGPSAGV + AL SL S + V A+ AMTGE++LRGLVLP+GG+K+K LAA
Sbjct: 664 VPAGATPKDGPSAGVAMFVALASLLSGRPVDANVAMTGEVSLRGLVLPIGGIKEKTLAAL 723
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
R GI V+LP RN KDL +VPA L +L R+ED L A
Sbjct: 724 RAGITTVMLPRRNEKDLDDVPAEARRKLRFVLLDRVEDALRCAL 767
>gi|373948996|ref|ZP_09608957.1| anti-sigma H sporulation factor, LonB [Shewanella baltica OS183]
gi|386325165|ref|YP_006021282.1| anti-sigma H sporulation factor LonB [Shewanella baltica BA175]
gi|333819310|gb|AEG11976.1| anti-sigma H sporulation factor, LonB [Shewanella baltica BA175]
gi|373885596|gb|EHQ14488.1| anti-sigma H sporulation factor, LonB [Shewanella baltica OS183]
Length = 785
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 326/777 (41%), Positives = 472/777 (60%), Gaps = 84/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R + + ++ A+ LE +E ++
Sbjct: 72 GTVASILQL---LKLPDGTVK--VLVEGGRRARITRYTQETEFFVAKAEYLESEPLEDKE 126
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q +I L+++ + +S +++ + LAD
Sbjct: 127 EEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGIDEAAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +++ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKLEDKQSVLEMINVGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ D+ AL RK++ A MP+ + EL +L+ M P T
Sbjct: 231 NEQMKAIQKELGDLDEGHDEFEALNRKIEEANMPAEAKEKALTELNKLRMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW + S+ I DL A+E LD+DH+GL +VK+RI+EYLAV+ +G
Sbjct: 291 VRSYVDWMTSVPWSQRSK-IKRDLAKAQEVLDTDHFGLEKVKERILEYLAVQSRVRQLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKVIQK 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + ++++GL + +++ ++ +
Sbjct: 470 ATSN-SMDIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLLNKQIERNGLKAAEIKVEDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR+LER L+ + R
Sbjct: 529 VGIIRYYTREAGVRSLERELSKICRKV--------------------------------- 555
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+++I + +S V+ V++ L+ LG RF D AE G
Sbjct: 556 -----VKMILLDKSVKSVT----------VNQENLKSFLGVQRF-DYGKAESKNQIGQVT 599
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L + A
Sbjct: 600 GLAWTQVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQLGINA--- 656
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + RDIH+H P GA PKDGPSAG + TALVS + VRAD AMTGE+TLRG VLP
Sbjct: 657 -DFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRADVAMTGEITLRGEVLP 715
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK V++P+ N +DL E+PA V+A LEI + +++VL+ A E
Sbjct: 716 IGGLKEKLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWVDEVLKLALE 772
>gi|33600234|ref|NP_887794.1| ATP-dependent protease La [Bordetella bronchiseptica RB50]
gi|412339518|ref|YP_006968273.1| ATP-dependent protease La [Bordetella bronchiseptica 253]
gi|427813469|ref|ZP_18980533.1| ATP-dependent protease La [Bordetella bronchiseptica 1289]
gi|33567832|emb|CAE31746.1| ATP-dependent protease La [Bordetella bronchiseptica RB50]
gi|408769352|emb|CCJ54128.1| ATP-dependent protease La [Bordetella bronchiseptica 253]
gi|410564469|emb|CCN22016.1| ATP-dependent protease La [Bordetella bronchiseptica 1289]
Length = 783
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 326/764 (42%), Positives = 452/764 (59%), Gaps = 76/764 (9%)
Query: 60 GVEKPSGRV------TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP 113
G E P R + ++++G RF V E + AR++ ++ Q E
Sbjct: 73 GTEGPVARYITGQEGAHHLLVQGQARFRVLEFLEGWPFLVARVALVDTPAASDSQTE--- 129
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
A Q K ++ I++L +E+ + LAD+ +I ++ +
Sbjct: 130 ---ARFLQLKQQTIDAIALLPNVPDELADVVRGIESPAL--LADMVTNLIDIKAGQKQDI 184
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L++ DL RL K EL+ L+ +R++++I ++ Q + Q+E +LR+Q+R I++ELG+
Sbjct: 185 LETFDLARRLDKVIELLAARLEVLRLSKEIGERTRAQFDERQRETVLREQLRQIQKELGE 244
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
DD + L+ ++ AGMP + H +KEL RL++M Y R YLE + +LPW
Sbjct: 245 TDDGAAEAAQLKETIEQAGMPEEVLNHARKELSRLQRMGDGSGEYAMLRTYLEWLTELPW 304
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
+ ++ +DL A+ LD DH+GL ++K+RI+EYLAVRKL P+ R P+LCFVGPPGVGK
Sbjct: 305 KHEPQQA-IDLAEARRVLDEDHFGLDKIKRRILEYLAVRKLNPEGRSPILCFVGPPGVGK 363
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSL SIA A GR F R++LGGV DEA+IRGHRRTY+G++PG +I ++R G N V++L
Sbjct: 364 TSLGQSIARATGRAFQRVALGGVHDEAEIRGHRRTYLGALPGNIIQAVRRAGTGNLVLML 423
Query: 414 DEIDKTGS-DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
DEIDK G+ GDP SALLEVLDPEQN F D+YL V +DLS V+F+ TAN +P P
Sbjct: 424 DEIDKLGAGGFHGDPGSALLEVLDPEQNHKFRDNYLAVDYDLSHVMFICTANVLDTVPGP 483
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DRME+I+LPGYT EEK++IA R+LI R L+ +GL E I +A + ++ YTREAG
Sbjct: 484 LRDRMEIIDLPGYTEEEKIQIARRYLIKRQLEANGLRPEQADITDAALAAIVGDYTREAG 543
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VRNLER + ++ R AA++VAE G
Sbjct: 544 VRNLEREIGSVLRHAAMQVAE--------------------------------------G 565
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
++ H + +D A L LGP RF++ E A R + PG++ GL WT GG++
Sbjct: 566 KAGH-----------VSIDAADLGATLGPRRFEN-EVALRTSLPGVATGLAWTPVGGDIL 613
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
F+EA+ + G G L LTGQLGDV+KESAQ ALT + + D L+ DIHIH
Sbjct: 614 FIEASKVPGSGRLILTGQLGDVMKESAQAALTLAKTWSGD----------ALEKVDIHIH 663
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
PAGA PKDGPSAGV + AL SL S + V A+ AMTGE++LRGLVLP+GG+K+K LAA
Sbjct: 664 VPAGATPKDGPSAGVAMFVALASLLSGRPVDANVAMTGEVSLRGLVLPIGGIKEKTLAAL 723
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
R GI V+LP RN KDL +VPA L +L R+ED L A
Sbjct: 724 RAGITTVMLPRRNEKDLDDVPAEARRKLRFVLLDRVEDALRCAL 767
>gi|156740991|ref|YP_001431120.1| ATP-dependent protease La [Roseiflexus castenholzii DSM 13941]
gi|156232319|gb|ABU57102.1| ATP-dependent protease La [Roseiflexus castenholzii DSM 13941]
Length = 786
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 345/778 (44%), Positives = 467/778 (60%), Gaps = 82/778 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR---ISSLEMTKIE 105
GV AR L V+ P G T ++LEG+ R VQ + +Y R IS E IE
Sbjct: 76 GVIAR---LDEFVKLPDG--TARIILEGISRALVQTMLQSEPFYRVRCHAISDPEPRGIE 130
Query: 106 MEQV-----EQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
+E + +Q +F+ + A+ + +++ P H LADI
Sbjct: 131 IEALMDSVKQQIDEFVDHLGEVPQDAVAFVHRIDK---------------PGH-LADIVT 174
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ FEE+L +L+ +D RL +A L+ R L+ +++ +KI Q + L +SQ+E+ L
Sbjct: 175 WAPAFEFEERLDILNELDPVERLRRAHRLLARQLELLKLRQKIQQDTKEVLDQSQREYFL 234
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
R+QMR I+ ELG++DD +D + L+RK+ P + + EL+RL + P
Sbjct: 235 REQMRVIRRELGEDDDVDDPIDELKRKIAQLDAPDYVKEQAMHELKRLAQQGMNSPEAGV 294
Query: 281 SRVYLELIADLPWEKASEEI-DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD-A 338
R YL+ I +LPW A EE+ ++ L A++ LD DHYGL RVK+RI+EYLAVRKL +
Sbjct: 295 IRTYLDWILNLPW--AEEELPEISLHEAQKVLDEDHYGLERVKERILEYLAVRKLAGNRM 352
Query: 339 RGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLI 398
R P+LCFVGPPGVGKTSL SIA ALGRKF+R SLGG++DEA+IRGHRRTYIG++PGR+I
Sbjct: 353 RSPILCFVGPPGVGKTSLGRSIARALGRKFVRTSLGGIRDEAEIRGHRRTYIGALPGRII 412
Query: 399 DGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVI 458
G+K PV +LDEIDK G D RGDP SALLEVLDPEQN F+DHYL +PFDLS+V+
Sbjct: 413 QGMKTAKSRYPVYVLDEIDKVGQDFRGDPTSALLEVLDPEQNNAFSDHYLEIPFDLSQVV 472
Query: 459 FVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEA 518
F+ATAN+ IP PL DRME+IE+ GYT +EKL IA L+ + + HGL + L I +A
Sbjct: 473 FIATANQLDTIPNPLRDRMEIIEIGGYTEDEKLGIAQGFLVRKQREFHGLAPDQLIITDA 532
Query: 519 MVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRL 578
+ +++ YTREAGVRNLER +A+L R A KVA
Sbjct: 533 AIIKLVREYTREAGVRNLEREIASLCRKTARKVAAA------------------------ 568
Query: 579 ADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGI 638
+DG VE P+V+D + LGP R+ A E+ G+
Sbjct: 569 SDGDPVEF--------------------PIVIDAPDIPNYLGPERYTFGLAEEKDEV-GV 607
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
+ G+ W+ GG+V +E +RGKG L LTGQLG+V+KESAQ A+++ R RA L +
Sbjct: 608 ATGVTWSPTGGDVLSIEVLPVRGKGGLQLTGQLGEVMKESAQAAMSYARFRAEQLGV--- 664
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ +IHIH P GAVPKDGPSAG+TL TAL+S + K VR D AMTGE+TLRG V
Sbjct: 665 -DPSYFDEHNIHIHVPEGAVPKDGPSAGITLTTALISAVTGKPVRRDVAMTGEITLRGKV 723
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K LAAHR GI+ ILP+ N KD+ E+P V L++I M++VL+ A
Sbjct: 724 LPIGGLKEKTLAAHRAGIRTFILPKDNAKDIAELPKKVREELQLIPVSSMDEVLKIAL 781
>gi|171914098|ref|ZP_02929568.1| DNA-binding ATP-dependent protease La [Verrucomicrobium spinosum
DSM 4136]
Length = 810
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 301/662 (45%), Positives = 428/662 (64%), Gaps = 55/662 (8%)
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
L D ++ + EQ +L+ D+ +R+++ + L + K+ Q V+ + S++
Sbjct: 198 LTDFLASNLGLEVAEQQALLEERDVLLRIARLQAHLYNQLHIAELQSKLRQDVQSEFSEA 257
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
QK LR+Q+RAI++ELG++ E+ + L R++ AG+P +KEL++L+
Sbjct: 258 QKRAYLREQVRAIQKELGEDGGTEEQVEDLRRRLDEAGLPVKAQAQARKELKKLEITPTA 317
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
P ++ + YLE +ADLPW K EE +DLK A+E LD DHYGL ++K+R+IEYLAVRKL
Sbjct: 318 SPDHSVTLNYLETLADLPWRKQDEE-HVDLKMAQEILDRDHYGLEKIKRRLIEYLAVRKL 376
Query: 335 KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
P GP+LCF+GPPGVGKTSL SIA +LGRKF RISLGG++DE++IRGHRRTYIGSMP
Sbjct: 377 NPAGHGPILCFLGPPGVGKTSLGQSIADSLGRKFARISLGGIRDESEIRGHRRTYIGSMP 436
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
GRLI L+R+G NPV++LDE+DK G+D RGDPASALLEVLDP QN F D Y+++PFDL
Sbjct: 437 GRLIQELRRLGTRNPVIMLDELDKMGADFRGDPASALLEVLDPRQNHEFVDRYVDLPFDL 496
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
S+V+F+AT N +P PL DRME+++LPGYT EKL I +L+ R +++HGL E
Sbjct: 497 SQVMFIATCNTLDTVPAPLRDRMEIVQLPGYTEREKLAIGRNYLVRRQVEEHGLKPEQCP 556
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLL 574
+ + VI+ YTREAGVRNLER +A++ R A +VA++E E+
Sbjct: 557 WADEAIATVIEDYTREAGVRNLERQIASVVRHVAARVAKEETER---------------- 600
Query: 575 DNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVA 634
+EV P A++ + LG +F RE+ + +
Sbjct: 601 -----------VEVTP----------------------AVVVEALGAAQF-GRESRLQSS 626
Query: 635 APGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQ 694
APG+ GL +T+ GGE+ +EA GKG LTGQLGDV+KES + AL+ VR+RA L
Sbjct: 627 APGVVTGLAYTSVGGEILHIEALRYPGKGGFILTGQLGDVMKESVRAALSLVRSRAGALG 686
Query: 695 LVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTL 754
+ ++ + ++H+H PAGAVPKDGPSAG+ + TAL SL++ + V D AMTGE+TL
Sbjct: 687 IDPKE----FEETEVHVHVPAGAVPKDGPSAGIAMFTALASLYTGRPVSKDVAMTGEVTL 742
Query: 755 RGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQ 814
RGLVLP+GG+K+K +AA R GIK +++P+ N KD+ E+PA V ++ II + +++VL +
Sbjct: 743 RGLVLPIGGLKEKSIAALRAGIKTILIPKLNEKDIPELPAEVRETVRIIPVETVDEVLRE 802
Query: 815 AF 816
A
Sbjct: 803 AL 804
>gi|146310567|ref|YP_001175641.1| DNA-binding ATP-dependent protease La [Enterobacter sp. 638]
gi|145317443|gb|ABP59590.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Enterobacter sp. 638]
Length = 784
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE ++ E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDDGEHFSAKAEYLESPQLDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+R++ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRRIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+ + ++++ L + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLSKQIERNALKESEITVDDSAIVSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
HE LG RFD A RV G GL WT GG++
Sbjct: 576 HE--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPHENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|421521990|ref|ZP_15968639.1| ATP-dependent protease La [Pseudomonas putida LS46]
gi|402754251|gb|EJX14736.1| ATP-dependent protease La [Pseudomonas putida LS46]
Length = 798
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 330/777 (42%), Positives = 466/777 (59%), Gaps = 85/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ S + A +S ++ T +
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFSEVEGHIRAEVSLIDETDTAERE 122
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q ++ L ++ A E++S L + G +L D
Sbjct: 123 SEVFVRTLLSQFEQYVQLGKKVPA---EVLSSLNSIDEPG-------------RLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIVDLTTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALTKAQAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW K ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYLDWLVQVPW-KTQSKVRLDLTKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L+P+ + +GL E L++ + +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKEELEVDISAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R + Q+Q + +S+
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKVVKEHTGQKQVKVKVASE---------------- 568
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
LE +LG +F AE+ G
Sbjct: 569 ---------------------------------QLEHLLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|427820737|ref|ZP_18987800.1| ATP-dependent protease La [Bordetella bronchiseptica D445]
gi|410571737|emb|CCN19979.1| ATP-dependent protease La [Bordetella bronchiseptica D445]
Length = 783
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 326/764 (42%), Positives = 452/764 (59%), Gaps = 76/764 (9%)
Query: 60 GVEKPSGRV------TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP 113
G E P R + ++++G RF V E + AR++ ++ Q E
Sbjct: 73 GTEGPVARYITGQEGAHHLLVQGQARFRVLEFLEGWPFLVARVALVDTPAASDSQTE--- 129
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
A Q K ++ I++L +E+ + LAD+ +I ++ +
Sbjct: 130 ---ARFLQLKQQTIDAIALLPNVPDELADVVRGIESPAL--LADMVTNLIDIKAGQKQDI 184
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L++ DL RL K EL+ L+ +R++++I ++ Q + Q+E +LR+Q+R I++ELG+
Sbjct: 185 LETFDLARRLDKVIELLAARLEVLRLSKEIGERTRAQFDERQRETVLREQLRQIQKELGE 244
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
DD + L+ ++ AGMP + H +KEL RL++M Y R YLE + +LPW
Sbjct: 245 TDDGAAEAAQLKETIEQAGMPEEVLNHARKELSRLQRMGDGSGEYAMLRTYLEWLTELPW 304
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
+ ++ +DL A+ LD DH+GL ++K+RI+EYLAVRKL P+ R P+LCFVGPPGVGK
Sbjct: 305 KHEPQQA-IDLAEARRVLDEDHFGLDKIKRRILEYLAVRKLNPEGRSPILCFVGPPGVGK 363
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSL SIA A GR F R++LGGV DEA+IRGHRRTY+G++PG +I ++R G N V++L
Sbjct: 364 TSLGQSIARATGRAFQRVALGGVHDEAEIRGHRRTYLGALPGNIIQAVRRAGTGNLVLML 423
Query: 414 DEIDKTGS-DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
DEIDK G+ GDP SALLEVLDPEQN F D+YL V +DLS V+F+ TAN +P P
Sbjct: 424 DEIDKLGAGGFHGDPGSALLEVLDPEQNHKFRDNYLAVDYDLSHVMFICTANVLDTVPGP 483
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DRME+I+LPGYT EEK++IA R+LI R L+ +GL E I +A + ++ YTREAG
Sbjct: 484 LRDRMEIIDLPGYTEEEKIQIARRYLIKRQLEANGLRPEQADITDAALAAIVGDYTREAG 543
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VRNLER + ++ R AA++VAE G
Sbjct: 544 VRNLEREIGSVLRHAAMQVAE--------------------------------------G 565
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
++ H + +D A L LGP RF++ E A R + PG++ GL WT GG++
Sbjct: 566 KAGH-----------VSIDTADLGATLGPRRFEN-EVALRTSLPGVATGLAWTPVGGDIL 613
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
F+EA+ + G G L LTGQLGDV+KESAQ ALT + + D L+ DIHIH
Sbjct: 614 FIEASKVPGSGRLILTGQLGDVMKESAQAALTLAKTWSGD----------ALEKVDIHIH 663
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
PAGA PKDGPSAGV + AL SL S + V A+ AMTGE++LRGLVLP+GG+K+K LAA
Sbjct: 664 VPAGATPKDGPSAGVAMFVALASLLSGRPVDANVAMTGEVSLRGLVLPIGGIKEKTLAAL 723
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
R GI V+LP RN KDL +VPA L +L R+ED L A
Sbjct: 724 RAGITTVMLPRRNEKDLDDVPAEARRKLRFVLLDRVEDALRCAL 767
>gi|354722310|ref|ZP_09036525.1| DNA-binding ATP-dependent protease La [Enterobacter mori LMG 25706]
Length = 784
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 330/765 (43%), Positives = 461/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ ++ E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDDGEHFSAKAEYLDSPELDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSALE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKANELTVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+V++ L LG RFD A RV G GL WT GG++
Sbjct: 568 ------------IVINGDNLHAYLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPYENKRDLEEIPDNVIADLQIHPVKRIEEVLSLALQN 773
>gi|406942057|gb|EKD74392.1| hypothetical protein ACD_44C00469G0002 [uncultured bacterium]
Length = 809
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/794 (41%), Positives = 471/794 (59%), Gaps = 80/794 (10%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q AS+ + +E I+ G A L L ++ P G V V++EG+ R + T
Sbjct: 57 QKNASEDQPTEEGIY--RIGTLATVLQL---LKLPDGTVK--VLIEGVKRAYIVRFLTNQ 109
Query: 90 TYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGR--TKVLL 147
Y+ A + ++ T + SR+ + L S EQ K + T++L
Sbjct: 110 DYFLADVELIQDTNVG-------------SREIEILIRSLKSQFEQYVKLNRKIPTEILA 156
Query: 148 ETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
+ I +LAD A + EE+ +L+ DL RL K +++ + ++V +KI
Sbjct: 157 SVLAIEDGSRLADTIAAHLSLKLEEKQKLLEITDLAKRLEKLVGVMESEIDLLQVEKKIR 216
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELG+ D+ ++L L +K++ +GM + + Q E
Sbjct: 217 GRVKRQMEKTQREYYLNEQMKAIQKELGELDEVPNELEGLAKKIEKSGMSAEAREKCQAE 276
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L +LK M P T SR YL+ + LPW+K S+ + + L A++ L+ +HYGL VK+R
Sbjct: 277 LNKLKMMSPMSAEATVSRNYLDWVLALPWKKRSK-LRVSLAEAEKILEVEHYGLKEVKER 335
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV K +GP+LC VGPPGVGKTSL SIA+A GRKF+R+SLGG++DEA+IRG
Sbjct: 336 ILEYLAVNKRVKKLKGPILCLVGPPGVGKTSLGQSIANATGRKFVRMSLGGIRDEAEIRG 395
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIG+MPG+++ + + VCNP LLDEIDK D RGDPASALLEVLDPEQN FN
Sbjct: 396 HRRTYIGAMPGKIVQKISKTDVCNPFFLLDEIDKMAMDFRGDPASALLEVLDPEQNHAFN 455
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+FVATAN + IPP L DRME+I +PGYT +EK+ IA+RHL+P+ L
Sbjct: 456 DHYLEVDYDLSDVMFVATANTLE-IPPALRDRMEIIRIPGYTEDEKVHIALRHLLPKQLA 514
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+GL + ++IP ++ +IQ YTREAGVRNLER ++ + R ++
Sbjct: 515 ANGLKTSEIEIPLETIRYIIQHYTREAGVRNLEREISKILRKVVKEI------------- 561
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRF 624
LL + A VE+ A LE LG R+
Sbjct: 562 --------LLKTK-AKKKRVEI--------------------------ADLEHYLGVRRY 586
Query: 625 DDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALT 684
AAE+ G GL WT GGE+ +EA + GKG+ TGQLG V++ES Q A+T
Sbjct: 587 RHDMAAEKDQI-GQVKGLAWTEVGGELLEIEAVTVPGKGKTTYTGQLGGVMQESIQAAMT 645
Query: 685 WVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRA 744
VR+RA + + + DIHIH P GA PKDGPSAG+++ TALVS+ ++ +R+
Sbjct: 646 VVRSRAPLMNI----NKHFFDKNDIHIHVPEGATPKDGPSAGISMCTALVSVLTQTPIRS 701
Query: 745 DTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIIL 804
D AMTGE+TLRG VL VGG+K+K+LAAHR GIK VI+P N+KDL E+P + L+I
Sbjct: 702 DYAMTGEITLRGEVLAVGGIKEKLLAAHRGGIKHVIIPAENVKDLKEIPENIKKDLDIKP 761
Query: 805 AKRMEDVLEQAFEG 818
+ +++VL A G
Sbjct: 762 VRWIDEVLSYALNG 775
>gi|423138928|ref|ZP_17126566.1| ATP-dependent protease La [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379051482|gb|EHY69373.1| ATP-dependent protease La [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 784
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L + ++ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLKN-------IVINGDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|210621784|ref|ZP_03292813.1| hypothetical protein CLOHIR_00758 [Clostridium hiranonis DSM 13275]
gi|210154548|gb|EEA85554.1| hypothetical protein CLOHIR_00758 [Clostridium hiranonis DSM 13275]
Length = 784
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 307/752 (40%), Positives = 459/752 (61%), Gaps = 66/752 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R +++ + Y+ A + + K + + + +++ +A L++
Sbjct: 91 VLVEGVTRATIKSVDKEEGYFKAVVEEVVEVK---DDETETAENEEEAKEIQALVRSLMA 147
Query: 132 VLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
E G + ++L+ I +L D A+ + +++ +++ D+K RL
Sbjct: 148 AFEDYINIGNKMSPEILISLSEIDDYGRLVDTIAANIYLKNDKKQEIIEEFDVKKRLELM 207
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
++ ++ +++ +KI +V+ Q+SK QKE+ LR+Q+RAI++ELG+++D D +
Sbjct: 208 YSIILEEVEIMKIEKKIALRVKKQMSKIQKEYYLREQLRAIQKELGEDEDTSSDAEKYRK 267
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K+++ P + + KE+ + +M P P SR YL++I LPW K ++E LD+K
Sbjct: 268 KLKTLKAPKETKEKISKEIEKFARMSPSSPDSAVSRNYLDMIFSLPWNKETKE-KLDVKK 326
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A+E L+ +HYGL +VK+RI+EYL+VRKL +GP++C VGPPGVGKTS+ S+A ALGR
Sbjct: 327 AEEILNEEHYGLDKVKERILEYLSVRKLSKSPKGPIICLVGPPGVGKTSIVKSVAKALGR 386
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
K+ R+SLGGV+DEA+IRGHRRTY+G++PGR+I+G+K G NPV LLDEIDK SD +GD
Sbjct: 387 KYTRLSLGGVRDEAEIRGHRRTYVGAIPGRIINGMKEAGSKNPVFLLDEIDKMASDYKGD 446
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
P SA+LEVLDPEQNK F DHY+ +PFDLSKV+F+ TAN +P PLLDRMEVI + GY
Sbjct: 447 PGSAMLEVLDPEQNKGFVDHYMEIPFDLSKVLFITTANTLDTVPRPLLDRMEVIRISGYI 506
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EEKL IA ++L+P+ + ++ L F+ + E +++ +I YTREAGVR LER + + R
Sbjct: 507 EEEKLNIAQKYLLPKQIKENALAEGFVTMDEDVMRKLINSYTREAGVRTLERTIGKVCRK 566
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITS 606
A K E PS +G +V+ME
Sbjct: 567 VAKKYVED------PS----------------LEGYDVKME------------------- 585
Query: 607 PLVVDEAMLEKVLGPP--RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGE 664
L++ LG ++D + RV G+ GL WT GG VE ++GKGE
Sbjct: 586 -------DLQEFLGKEIFKYDLAKDEPRV---GLVTGLAWTEVGGVTLEVEVNVLKGKGE 635
Query: 665 LHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPS 724
+ LTGQLGDV+KESA+ ++++R+RA +L + E + DIHIH P GA PKDGPS
Sbjct: 636 IVLTGQLGDVMKESARAGISYIRSRADELGIDPE----FYKNTDIHIHLPEGATPKDGPS 691
Query: 725 AGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPER 784
AG+T+ A++S + + V D AMTGE+TLRG VLPVGGVK+K+LAAHR G+K+ +LP
Sbjct: 692 AGITMALAVISALTGRGVPGDIAMTGEITLRGRVLPVGGVKEKLLAAHRAGVKKALLPVE 751
Query: 785 NLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
DL E+P V A +E +L + M+DVL++A
Sbjct: 752 CEADLDEIPENVKADMEFVLVETMDDVLKEAL 783
>gi|414173786|ref|ZP_11428413.1| lon protease [Afipia broomeae ATCC 49717]
gi|410890420|gb|EKS38219.1| lon protease [Afipia broomeae ATCC 49717]
Length = 809
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 327/794 (41%), Positives = 466/794 (58%), Gaps = 86/794 (10%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q ASD + I+ G A L L ++ P G V V++EGL R + + R
Sbjct: 63 QKNASDDDPAPDSIY--EIGTLASVLQL---LKLPDGTVK--VLVEGLERGKAGKYADRT 115
Query: 90 TYYTARISSL---EMTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
+Y A +++L + +E E + + DF + + K + E++ V++Q
Sbjct: 116 DFYEASVTALADLDAKSVEAEALSRSVVSDFESYVKLNKKISAEVVGVVQQ--------- 166
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
KLAD + + ++ +L+++ + RL K L++ + ++V +KI
Sbjct: 167 ----ITDFAKLADTVASHLAVKISDRQTILETLSVSQRLEKVMGLMESEISVLQVEKKIR 222
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELGD D+ D+L LE K+ + + E
Sbjct: 223 SRVKRQMEKTQREYYLNEQMKAIQKELGD-DEGRDELADLEEKINKTKLSKEAREKAAHE 281
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L++L++M P T R YL+ + +PW K S+ + DL AA+E LDSDHYGL +VK R
Sbjct: 282 LKKLRQMSPMSAEATVVRNYLDWLLSIPWGKKSK-VKKDLVAAQEVLDSDHYGLEKVKDR 340
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRG
Sbjct: 341 IVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRDEAEIRG 400
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TFN
Sbjct: 401 HRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNGTFN 460
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP +
Sbjct: 461 DHYLEVDYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTENEKVEIARKHLIPNAIA 519
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+HGL S+ I + + +I+RYTREAGVRNLER ++ LAR +E + K
Sbjct: 520 KHGLNSKEWSIDDEALLFLIRRYTREAGVRNLEREISTLARKGV-------KELMISKKK 572
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP-- 622
V V A++E+ LG P
Sbjct: 573 SVK------------------------------------------VTAAVVEEFLGVPKY 590
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
R+ + ++ ++V G+ GL WT GGE+ +E+ M GKG + +TG L DV+KES A
Sbjct: 591 RYGEIDSEDQV---GVVTGLAWTEVGGELLTIESVMMPGKGRMTVTGNLRDVMKESISAA 647
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA + + L RDIH+H P GA PKDGPSAGV + T++VS+ + +
Sbjct: 648 ASYVRSRAINYGIEPP----LFDRRDIHVHVPEGATPKDGPSAGVAMTTSIVSVLTGIPI 703
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V +PE N KDL E+ A+ +EI
Sbjct: 704 RHDVAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVFIPEDNAKDLTEISDAIKGGMEI 763
Query: 803 ILAKRMEDVLEQAF 816
I RM++VL +A
Sbjct: 764 IPVARMDEVLAKAL 777
>gi|402851376|ref|ZP_10899536.1| ATP-dependent protease La Type I [Rhodovulum sp. PH10]
gi|402498351|gb|EJW10103.1| ATP-dependent protease La Type I [Rhodovulum sp. PH10]
Length = 779
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 322/758 (42%), Positives = 454/758 (59%), Gaps = 77/758 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEMEQVEQD--PDFIAL 118
P G V V++EG R V + R YY A L K+E E + + +F
Sbjct: 60 PDGTVK--VLVEGTERARVIGYTDRVDYYEAEAEVLADHIGEKVEAEALARSVVTEFEGY 117
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
+ K + E++ V++Q KLAD + + ++ +L++
Sbjct: 118 VKLNKKVSPEVVGVVQQIDDYA-------------KLADTVASHLAVKIPDKQGILETTV 164
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL K L++ + ++V ++I +V+ Q+ K+Q+E+ L +QM+AI++ELGD +D
Sbjct: 165 VTERLEKVLGLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQMKAIQKELGD-EDGR 223
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
D+L LE K++ + + Q EL++L++M P T R YL+ + +PW K ++
Sbjct: 224 DELAELEDKIKKTKLSKEAREKAQHELKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKTK 283
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ DL A+E LD+DHYGL +VK+RI+EYLAV+ GP+LC VGPPGVGKTSL
Sbjct: 284 -VKKDLTLAEETLDTDHYGLEKVKERIVEYLAVQSRANKLSGPILCLVGPPGVGKTSLGK 342
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A GR+F+R+SLGGV+DEA+IRGHRRTYIGSMPG++I +++ NP+ LLDE+DK
Sbjct: 343 SIAKATGREFVRVSLGGVRDEAEIRGHRRTYIGSMPGKIIQSMRKAKSSNPLFLLDEVDK 402
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD RGDP+SALLEVLDPEQN TFNDHYL V +DLS V+F+ TAN IP PL+DRME
Sbjct: 403 MGSDFRGDPSSALLEVLDPEQNHTFNDHYLEVDYDLSNVMFITTANTLN-IPAPLMDRME 461
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
+I + GYT EEK++IA RHLIP L +HGL ++ I + + L+I+RYTREAGVRNLER
Sbjct: 462 IIRIAGYTEEEKVQIARRHLIPNALSKHGLDTKEWSIDDDALLLLIRRYTREAGVRNLER 521
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
L+ LAR A ++ + S K
Sbjct: 522 ELSTLARKAV--------KELMISQK---------------------------------- 539
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
T +T+ + D LG P++ E E G+ GL WT+ GGE+ +E
Sbjct: 540 -ATIEVTTETIGD------YLGVPKYRHGEIEEEDQV-GVVTGLAWTDAGGELLTIEGLM 591
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
M G+G++ +TG L DV+KES A ++VR+RA + L + RDIH+H P GA
Sbjct: 592 MPGRGKMTVTGNLRDVMKESISAAASYVRSRAIAFGIEPP----LFEKRDIHVHVPEGAT 647
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV +VTA++S+ + VR D AMTGE+TLRG VLP+GG+K+K+LAAHR GIK
Sbjct: 648 PKDGPSAGVAMVTAIISVMTGIPVRRDVAMTGEITLRGRVLPIGGLKEKLLAAHRGGIKT 707
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
V++PE N KDLV++ V + LEI+ RM++VL +A
Sbjct: 708 VLIPEENAKDLVDISETVKSDLEIVPVTRMDEVLARAL 745
>gi|15888590|ref|NP_354271.1| ATP-dependent protease LA [Agrobacterium fabrum str. C58]
gi|335035104|ref|ZP_08528447.1| ATP-dependent protease LA [Agrobacterium sp. ATCC 31749]
gi|15156310|gb|AAK87056.1| ATP-dependent protease LA [Agrobacterium fabrum str. C58]
gi|333793535|gb|EGL64889.1| ATP-dependent protease LA [Agrobacterium sp. ATCC 31749]
Length = 805
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 334/795 (42%), Positives = 455/795 (57%), Gaps = 85/795 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ ASD E IH G A L L ++ P G V V++EG R + + R
Sbjct: 56 TQINASDDDPAPEAIH--KVGTVANVLQL---LKLPDGTVK--VLVEGKGRAQIDSYTGR 108
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLE 148
+Y A + L+ E E + ALSR ++S E K K+ E
Sbjct: 109 EDFYEASATPLQ------EPAEDPVEIEALSRS-------VVSEFESYVKLN--KKISPE 153
Query: 149 TV-------PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAE 201
V KLAD + I E+ ML++V +K RL KA ++ + ++V +
Sbjct: 154 VVGAAGQIDDYSKLADTVASHLSIKITEKQEMLETVSVKQRLEKALGFMEGEISVLQVEK 213
Query: 202 KITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHV 261
+I +V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D++ LE ++ + +
Sbjct: 214 RIRSRVKRQMEKTQREYYLNEQMKAIQKELGDGEDGRDEMAELEERIAKTKLSKEAKEKA 273
Query: 262 QKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRV 321
E+++L++M P T R YL+ + LPW K S+ I DL AA+ LD DH+GL +V
Sbjct: 274 DAEMKKLRQMSPMSAEATVVRNYLDWLLGLPWGKKSK-IKTDLNAAETILDQDHFGLDKV 332
Query: 322 KQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEAD 381
K+RI+EYLAV+ RGP+LC VGPPGVGKTSLA SIA A GR+++R++LGGV+DEA+
Sbjct: 333 KERIVEYLAVQARATKIRGPILCLVGPPGVGKTSLAKSIAKATGREYVRMALGGVRDEAE 392
Query: 382 IRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK 441
IRGHRRTYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN
Sbjct: 393 IRGHRRTYIGSMPGKIVQSMKKAKKANPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNS 452
Query: 442 TFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPR 501
TF DHYL V +DLS V+FV TAN IP PL+DRMEVI + GYT +EK IA RHL+P+
Sbjct: 453 TFMDHYLEVEYDLSDVMFVTTANTLN-IPGPLMDRMEVIRIAGYTEDEKREIAKRHLLPK 511
Query: 502 VLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALP 561
+ +H L E + + + + Q+YTREAGVRN ER L LAR A ++ +
Sbjct: 512 AIKEHALRPEEFSVSDDALMAISQQYTREAGVRNFERELMKLARKAVTEIIK-------- 563
Query: 562 SSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGP 621
G+ST + V A +E LG
Sbjct: 564 ------------------------------GKSTS-----------VAVTAANIEDYLGI 582
Query: 622 PRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
PRF E AER G+ GL WT GGE+ +E M GKG + +TG L +V+KES
Sbjct: 583 PRFRHGE-AEREDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLKEVMKESISA 641
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA D + DIH+H P GA PKDGPSAGV + TA+VS+ +
Sbjct: 642 AASYVRSRAVDFGIEPPR----FDKSDIHVHVPEGATPKDGPSAGVAMATAIVSIMTGIP 697
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
V D AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL E+P V +E
Sbjct: 698 VSKDVAMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLAEIPDNVKNEME 757
Query: 802 IILAKRMEDVLEQAF 816
II RM +V++ A
Sbjct: 758 IIPVSRMGEVIKHAL 772
>gi|395228094|ref|ZP_10406418.1| lon protease [Citrobacter sp. A1]
gi|421843721|ref|ZP_16276881.1| DNA-binding ATP-dependent protease La [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|424730591|ref|ZP_18159186.1| dna-binding atp-dependent protease la [Citrobacter sp. L17]
gi|394718216|gb|EJF23853.1| lon protease [Citrobacter sp. A1]
gi|411775442|gb|EKS58888.1| DNA-binding ATP-dependent protease La [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|422894784|gb|EKU34591.1| dna-binding atp-dependent protease la [Citrobacter sp. L17]
gi|455641801|gb|EMF20972.1| DNA-binding ATP-dependent protease La [Citrobacter freundii GTC
09479]
Length = 784
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLALALQN 773
>gi|410474124|ref|YP_006897405.1| ATP-dependent protease La [Bordetella parapertussis Bpp5]
gi|408444234|emb|CCJ50953.1| ATP-dependent protease La [Bordetella parapertussis Bpp5]
Length = 783
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 326/764 (42%), Positives = 452/764 (59%), Gaps = 76/764 (9%)
Query: 60 GVEKPSGRV------TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP 113
G E P R + ++++G RF V E + AR++ ++ Q E
Sbjct: 73 GTEGPVARYITGQEGAHHLLVQGQARFRVLEFLEGWPFLVARVALVDTPAASDSQTE--- 129
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
A Q K ++ I++L +E+ + LAD+ +I ++ +
Sbjct: 130 ---ARFLQLKQQTIDAIALLPNVPDELADVVRGIESPAL--LADMVTNLIDIKAGQKQDI 184
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L++ DL RL K EL+ L+ +R++++I ++ Q + Q+E +LR+Q+R I++ELG+
Sbjct: 185 LETFDLARRLDKVIELLAARLEVLRLSKEIGERTRAQFDERQRETVLREQLRQIQKELGE 244
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
DD + L+ ++ AGMP + H +KEL RL++M Y R YLE + +LPW
Sbjct: 245 TDDGAAEAAQLKETIEQAGMPEEVLNHARKELSRLQRMGDGSGEYAMLRTYLEWLTELPW 304
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
+ ++ +DL A+ LD DH+GL ++K+RI+EYLAVRKL P+ R P+LCFVGPPGVGK
Sbjct: 305 KHEPQQA-IDLAEARRVLDEDHFGLDKIKRRILEYLAVRKLNPEGRSPILCFVGPPGVGK 363
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSL SIA A GR F R++LGGV DEA+IRGHRRTY+G++PG +I ++R G N V++L
Sbjct: 364 TSLGQSIARATGRAFQRVALGGVHDEAEIRGHRRTYLGALPGNIIQAVRRAGTGNLVLML 423
Query: 414 DEIDKTGS-DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
DEIDK G+ GDP SALLEVLDPEQN F D+YL V +DLS V+F+ TAN +P P
Sbjct: 424 DEIDKLGAGGFHGDPGSALLEVLDPEQNHKFRDNYLAVDYDLSHVMFICTANVLDTVPGP 483
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DRME+I+LPGYT EEK++IA R+LI R L+ +GL E I +A + ++ YTREAG
Sbjct: 484 LRDRMEIIDLPGYTEEEKIQIARRYLIKRQLEANGLRPEQADITDAALAAIVGDYTREAG 543
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VRNLER + ++ R AA++VAE G
Sbjct: 544 VRNLEREIGSVLRHAAMQVAE--------------------------------------G 565
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
++ H + +D A L LGP RF++ E A R + PG++ GL WT GG++
Sbjct: 566 KAGH-----------VSIDAADLGATLGPRRFEN-EVALRTSLPGVATGLAWTPVGGDIL 613
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
F+EA+ + G G L LTGQLGDV+KESAQ ALT + + D L+ DIHIH
Sbjct: 614 FIEASKVPGSGRLILTGQLGDVMKESAQAALTLAKTWSGD----------ALEKVDIHIH 663
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
PAGA PKDGPSAGV + AL SL S + V A+ AMTGE++LRGLVLP+GG+K+K LAA
Sbjct: 664 VPAGATPKDGPSAGVAMFVALASLLSGRPVDANVAMTGEVSLRGLVLPIGGIKEKTLAAP 723
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
R GI V+LP RN KDL +VPA L +L R+ED L A
Sbjct: 724 RAGITTVMLPRRNEKDLDDVPAEARRKLRFVLLDRVEDALRCAL 767
>gi|284006423|emb|CBA71659.1| ATP-dependent protease La [Arsenophonus nasoniae]
Length = 786
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 327/765 (42%), Positives = 455/765 (59%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + L+ G Y+ A+ + E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLRRAKITTLTDNGEYFIAQAEYFSSPTVDEKEQEVLNRTTINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + +EQ K LAD + + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLHSIEQSDK----------------LADTIASHMPLKLADKQRVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ +
Sbjct: 186 MADVVERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEME 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ +RK++ MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYEMFKRKIEEVKMPKEARQKAEAELQKLKMMSPMSAEATVLRSYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LDSDHYGL RVK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLLKAQETLDSDHYGLERVKERILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMGKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ + ++ L L I ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKKHLLPKQIQRNALKKGELTIDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A +AL L+D L
Sbjct: 544 LEREISKLCRKAV---------KAL------------LMDKSLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
LV+++ L+ LG + D A R+ G GL WT GG++
Sbjct: 568 ------------LVINDDNLKDYLGVRKVDYGRADTENRI---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQTALTTVRARAEKLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P+ N +DL E+P V+A+L+I K +E+V A +
Sbjct: 729 GGIKIVLIPDENRRDLEEIPQNVIANLKIYPVKTIEEVFSIALQN 773
>gi|217973908|ref|YP_002358659.1| ATP-dependent protease La [Shewanella baltica OS223]
gi|217499043|gb|ACK47236.1| ATP-dependent protease La [Shewanella baltica OS223]
Length = 785
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 322/762 (42%), Positives = 466/762 (61%), Gaps = 81/762 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVE--------QDPDF 115
P G V V++EG R + + ++ A+ LE +E ++ E Q +
Sbjct: 84 PDGTVK--VLVEGGRRARITRYTQETEFFVAKAEYLESEPLEDKEEEVLVRSAIGQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + +S +++ + LAD A + E++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLSGIDEAAR----------------LADTMAAHMPLKLEDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+++ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELGD D
Sbjct: 186 MINVGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYLNEQMKAIQKELGDLD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
+ D+ AL RK++ A MP+ + EL +L+ M P T R Y++ + +PW +
Sbjct: 246 EGHDEFEALNRKIEEANMPAEAKEKALAELNKLRMMSPMSAEATVVRSYVDWMTSVPWSQ 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ I DL A+E LD+DH+GL +VK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-IKRDLAKAQEVLDTDHFGLEKVKERILEYLAVQSRVRQLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG++I + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKVIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVATSN-SMDIPGPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+ + ++++GL + +++ ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLNKQIERNGLKAAEIKVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ + R +++I + +S
Sbjct: 544 LERELSKICRKV--------------------------------------VKMILLDKSV 565
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
V+ V++ L+ LG RF D AE G GL WT GG++ +E
Sbjct: 566 KSVT----------VNQENLKSFLGVQRF-DYGKAESKNQIGQVTGLAWTQVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
AT++ GKG+L TG LGDV++ES Q A+T VRARA L + A + + RDIH+H P
Sbjct: 615 ATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQLGINA----DFYEKRDIHVHVPE 670
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAG + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR G
Sbjct: 671 GATPKDGPSAGAAMCTALVSSLTGNPVRADVAMTGEITLRGEVLPIGGLKEKLLAAHRGG 730
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
IK V++P+ N +DL E+PA V+A LEI + +++VL+ A E
Sbjct: 731 IKLVLIPKENERDLEEIPANVIADLEIRPVRWVDEVLKLALE 772
>gi|261341040|ref|ZP_05968898.1| ATP-dependent protease La [Enterobacter cancerogenus ATCC 35316]
gi|288316905|gb|EFC55843.1| ATP-dependent protease La [Enterobacter cancerogenus ATCC 35316]
Length = 784
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 465/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ ++ E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGEHFSAKAEYLDSPQLDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLTDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKANELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H LG RFD A RV G GL WT GG++
Sbjct: 576 H--------------------AYLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPDENKRDLEEIPDNVIADLQIHPVKRIEEVLTLALQN 773
>gi|389756355|ref|ZP_10191465.1| ATP-dependent serine proteinase La [Rhodanobacter sp. 115]
gi|388431603|gb|EIL88661.1| ATP-dependent serine proteinase La [Rhodanobacter sp. 115]
Length = 835
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 336/779 (43%), Positives = 472/779 (60%), Gaps = 58/779 (7%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G A L L ++ P G V V++EG R +++ +AR +E
Sbjct: 76 HAIGTLASVLQL---LKLPDGTVK--VLVEGQARVDIEDYHDESGMLSARSRVIE----- 125
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQ--KQKTGGRTKVLLETVPIH---KLADIFV 160
P + R+ + LIS+ EQ KQ +VL I ++AD
Sbjct: 126 -------PVYSGKEREVDVVSRTLISLFEQLVKQSRKLPPEVLTTLSGIEDPSRVADSIA 178
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + ++ +L++VD+ RL LVD + +V ++I +V+ Q+ KSQ+E+ L
Sbjct: 179 AHLSVRMADKQKVLETVDVGQRLELLIGLVDGEMDLQQVEKRIRGRVKSQMEKSQREYYL 238
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELG+ +D +++ L++K++SAGMP + ++E +L++M P T
Sbjct: 239 NEQMKAIQKELGEGEDGPNEIEELQKKIESAGMPKVVLAKARQEFGKLRQMSPMSAEATV 298
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW+K S+ + DL A+E LD+DH+GL +VK RI+EYLAV++ +G
Sbjct: 299 VRNYLDWLVGVPWKKRSK-VRKDLALAQEVLDADHFGLEKVKDRILEYLAVQQRVNTMKG 357
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A RKFIR+SLGGV+DEA+IRGHRRTYIGSMPGR++
Sbjct: 358 PILCLVGPPGVGKTSLGQSIAKATNRKFIRMSLGGVRDEAEIRGHRRTYIGSMPGRIVQN 417
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VG NP+ +LDEIDK D RGDP+SALLEVLDPEQN TFNDHYL V DLS+V+++
Sbjct: 418 INKVGTRNPLFVLDEIDKMSMDFRGDPSSALLEVLDPEQNHTFNDHYLEVDLDLSEVMWI 477
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
ATAN IP PLLDRMEVI +PGYT +EKL IA R+L+P+ L +GL E L + E +
Sbjct: 478 ATANSLN-IPGPLLDRMEVIRIPGYTEDEKLAIAQRYLLPKQLKANGLKPEELSVGEDAI 536
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +++ YTRE+GVRNLER ++ + R K+ +Q L +
Sbjct: 537 RDIVRYYTRESGVRNLEREISKICR----KIVKQLT---------------------LGE 571
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGI 638
+ + P S T + + VD LE+ LG RFD +E V G+
Sbjct: 572 IVPAKAKKSPAKAVKTAKSKTVKPAAAAHVDADNLERYLGVRRFDFGRKEQQNEV---GL 628
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
GL WT GGE+ +EA+ + GKG L TGQLGDV+KES Q AL+ VR R L + +
Sbjct: 629 VTGLAWTQVGGELLSIEASVVAGKGRLVNTGQLGDVMKESIQAALSVVRTRVGPLGIEPD 688
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
L D+HIH P GA PKDGPSAG+T+ TALVS ++ VR++ AMTGE+TLRG V
Sbjct: 689 FHEKL----DLHIHVPEGATPKDGPSAGITMCTALVSALTKIPVRSEVAMTGEITLRGRV 744
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LP+GG+K+K+LAAHR GI VI+P+ N KDL ++PA + SLEI + +++VL+ A E
Sbjct: 745 LPIGGLKEKLLAAHRGGITTVIIPDDNRKDLADIPANITDSLEIHPVRWIDEVLDIALE 803
>gi|339486805|ref|YP_004701333.1| ATP-dependent protease La [Pseudomonas putida S16]
gi|338837648|gb|AEJ12453.1| ATP-dependent protease La [Pseudomonas putida S16]
Length = 798
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/774 (43%), Positives = 468/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ S + A +S ++
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFSEVEGHIRAEVSLID-------- 114
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
E D A R+ + L+S EQ + G + +VL I +L D A
Sbjct: 115 -EAD----AAERESEVFVRTLLSQFEQYVQLGKKVPAEVLSSLNSIEEPGRLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQEILEIVDLPTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRS 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +PW KA ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RGPVL
Sbjct: 290 YLDWLVQVPW-KAQSKVRLDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTS 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IPP LLDRMEVI LPGYT +EK+ IA+++L+P+ + +GL + L++ + ++ +
Sbjct: 469 N-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKDELEVDVSAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR LER +A + R + Q+Q + +S+
Sbjct: 528 IRFYTREAGVRGLERQIAKVCRKVVKEHTGQKQVKVKVASE------------------- 568
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
LE +LG +F AE+ G GL
Sbjct: 569 ------------------------------QLEHLLGVRKF-RYGLAEQQDQIGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A +
Sbjct: 598 WTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|409123222|ref|ZP_11222617.1| ATP-dependent protease La [Gillisia sp. CBA3202]
Length = 816
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 313/773 (40%), Positives = 464/773 (60%), Gaps = 71/773 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ GV AR L R ++ P G T V+++G RF ++E+ + Y TA + + + +
Sbjct: 102 YKTGVVARIL---RVLKMPDGNTT--VIIQGKKRFKIKEVISEKPYMTASVDEVPEVRPD 156
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FE 164
++ E F A+ K A+++I + ++ + FV+S
Sbjct: 157 LKNAE----FGAIIESIKDLALQII---KGSPNIPSEASFAIKNIESPSFLINFVSSNMN 209
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+S EE+ +L + +LK R + ++ Q + + I KV+ +S+ Q+E+ L QQM
Sbjct: 210 LSVEEKQKLLKTNNLKNRALDTLKYMNVENQKLELKNVIQSKVQSDMSQQQREYFLHQQM 269
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+ I+EELG +ED++ + + + + KH KEL ++++M PQ Y+ R Y
Sbjct: 270 KTIQEELG-GASNEDEMEEMRVRAKDKKWDEKVEKHFTKELSKMQRMNPQVAEYSIQRNY 328
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
L+L DLPW++ S++ DLK AK+ LD DHYGL VK+RIIEYLAV KL+ D + P+LC
Sbjct: 329 LDLFLDLPWDEFSKD-KFDLKRAKKILDRDHYGLDDVKERIIEYLAVLKLRNDMKSPILC 387
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
GPPGVGKTSL SIA ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR+I LK+
Sbjct: 388 LYGPPGVGKTSLGRSIAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKA 447
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G NPV +LDEIDK + GDP+SALLEVLDPEQN F+D++L + FDLSKV+F+ATAN
Sbjct: 448 GTSNPVFVLDEIDKLSNGHNGDPSSALLEVLDPEQNSEFHDNFLEMGFDLSKVMFIATAN 507
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
+ P L DRME+I + GYT EEK+ IA +HL+P+ L +HGL E ++I +A ++ ++
Sbjct: 508 SLSTVQPALRDRMEIINVTGYTIEEKVEIAKQHLLPKQLKEHGLSKEHIKIGKAQLEKIV 567
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDV-HRLGSPLLDNRLADGAE 583
+ YTRE+GVR LE+ +A + R AA +A +E+ S++DV LGSP ++
Sbjct: 568 EGYTRESGVRGLEKQIAKMVRYAAKSIAMEEKYSIKISNEDVIEILGSPKME-------- 619
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
R+ E G+ GL
Sbjct: 620 -------------------------------------------RDKYENNEVAGVVTGLA 636
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT+ GG++ F+E+ +GKG L++TG LG V+KESA IA+ ++++ A L L E +
Sbjct: 637 WTSVGGDILFIESILSKGKGNLNITGNLGKVMKESATIAMEYIKSNAEMLNLDPE----V 692
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ ++HIH P GA PKDGPSAG+T++T+LVSLF++++++ AMTGE+TLRG VLPVGG
Sbjct: 693 FEKYNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQRKIKKSLAMTGEITLRGKVLPVGG 752
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+K+KILAA R IK +IL E N +D+ E+ A L L K M++V++ A
Sbjct: 753 IKEKILAAKRARIKEIILCEDNKRDIDEIKADYLKGLTFHYVKEMKEVIDLAL 805
>gi|310657903|ref|YP_003935624.1| DNA-binding ATP-dependent protease La [[Clostridium] sticklandii]
gi|308824681|emb|CBH20719.1| DNA-binding ATP-dependent protease La [[Clostridium] sticklandii]
Length = 791
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 319/746 (42%), Positives = 462/746 (61%), Gaps = 62/746 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
V++EG+ R ++EL Y+ A+I I E++ ++ D A R T E ++
Sbjct: 91 VLVEGISRAKIKELYQIEPYFRAKIQE----AIYSEELREEKDIDATMRLVLDTFEEYVN 146
Query: 132 VLEQKQKTGGRTKVLLETV-PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+ K G + L + + AD A+ + ++ +L+ D K+RL + ++
Sbjct: 147 I---GNKVSGEVLITLADIDEPSRFADTVAANIILKPAQKQNILEIFDPKLRLEEIYRIL 203
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
++ + + + I +V+ Q++K QKE+ LR+Q++AI+ ELG++++ D+L + K++
Sbjct: 204 LEEIEVLEIEKTINIRVKKQVNKIQKEYYLREQLKAIQRELGEDEEVSDELDEYKEKLKK 263
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
+ I + ++KE+ RL +M P R YL+ LPW+K S++ LD+K A+
Sbjct: 264 LKVSKEIKEKIEKEIARLSRMSPSSAEGGVIRSYLDNFFALPWDKESKD-KLDIKLAESI 322
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD DH+GL +VK+RIIEYLAVR+L +GP+LC VGPPGVGKTS+A S+A +L RKF+R
Sbjct: 323 LDEDHFGLEKVKERIIEYLAVRQLSKSMKGPILCLVGPPGVGKTSIAKSVARSLNRKFVR 382
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV+DEA+IRGHRRTY+G++PGR+I+ +K V V NPV L DEIDK SD RGDPASA
Sbjct: 383 VSLGGVRDEAEIRGHRRTYVGAIPGRIINAIKEVKVKNPVFLFDEIDKMASDFRGDPASA 442
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
+LEVLDPEQNK F DHY+ +PFDLSKV+F+ TAN +P PLLDRMEVIE+ GYT EEK
Sbjct: 443 MLEVLDPEQNKDFTDHYMEIPFDLSKVLFITTANSLSTVPRPLLDRMEVIEISGYTEEEK 502
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
L+IA +L+P+ L +HGL +FL+I + +KLVI +YTRE+GVRNLER + L R AA
Sbjct: 503 LKIARIYLLPKQLKEHGLSEDFLKISDENLKLVISKYTRESGVRNLERKIGQLCRKAAKS 562
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
E +P L++ + +
Sbjct: 563 KVE-----------------NPKLES-------------------------------VTI 574
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
+ +EK LG P F + +E+ G GL WT GG+ +E T M+G G+L LTGQ
Sbjct: 575 TKQNMEKYLGKPIFRYQTVSEKPEI-GSVTGLAWTPVGGDTLTIEVTTMQGSGKLELTGQ 633
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LG+V+KESA+ +++VR+ A + E + +DIH+H P GA+PKDGPSAGVT+
Sbjct: 634 LGNVMKESAKAGMSYVRSIADRYGIEPE----FYKEKDIHVHIPEGAIPKDGPSAGVTMA 689
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
TAL+S S+ V + AMTGE+TLRG VLPVGG+K+K+LAAHR GIK+V+LP N +D+
Sbjct: 690 TALLSALSKIPVSGELAMTGEVTLRGKVLPVGGIKEKVLAAHRAGIKKVLLPLDNKRDID 749
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAF 816
++P + LE +L M++VLE A
Sbjct: 750 DIPQNIRKQLEFVLVSNMDEVLEHAL 775
>gi|313891543|ref|ZP_07825153.1| endopeptidase La [Dialister microaerophilus UPII 345-E]
gi|313120002|gb|EFR43184.1| endopeptidase La [Dialister microaerophilus UPII 345-E]
Length = 777
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 316/745 (42%), Positives = 452/745 (60%), Gaps = 61/745 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
+++EG+ R +V+ + Y TA ++ E + + L+ F+ IS
Sbjct: 92 ILVEGVSRVTVKSIKRTQDYVTAEFEKVKEIYPEDNIRAEAYRRVLLTSFFEWMQQGKIS 151
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
+ E++ T L + D I + +L+++D+ RL + +D
Sbjct: 152 LSEEQ------TAQLRSMSEVGSTVDFIAQQLIIPMNRKQDLLETLDVMERLKAVQKYID 205
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+Q R+ +I +V ++ K Q+++ LRQ++++I ++LGD E + +K+ +
Sbjct: 206 DEIQIGRMEAEINGEVRTRMEKEQRDYFLRQKIKSIHDKLGDRISQEQEAEEYRKKLAKS 265
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
G+P ++KE+ L+ M P R YLE I LPW+K S++ LDL AK+ L
Sbjct: 266 GIPEESKAKIEKEISHLETMPPMMAETAIVRNYLEWIMGLPWKKESKD-KLDLHHAKKML 324
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D +H+GL ++K+ I+EYLAVR L P+A+ P++CFVGPPGVGKTSLA SIA A+GRKF RI
Sbjct: 325 DKEHFGLEKIKEHILEYLAVRILAPNAKAPIICFVGPPGVGKTSLAQSIADAMGRKFARI 384
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGG+ DEA+IRGHRRTYIG+MPGR I+ + + NP++LLDEIDK GSD RGDPASAL
Sbjct: 385 SLGGLHDEAEIRGHRRTYIGAMPGRFIEAINQAKTKNPLILLDEIDKVGSDFRGDPASAL 444
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LE LDPEQNK F+D+Y+++ FD SKV F+ATAN IP LLDRMEVI L GYT +EKL
Sbjct: 445 LEALDPEQNKAFHDNYIDISFDFSKVFFIATANTLSTIPAALLDRMEVISLSGYTEDEKL 504
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
IA R+L+PR + GL +E ++ A+++ +I+ YTREAGVR LER + L R A K+
Sbjct: 505 EIAKRYLVPRQKEMSGLKNEDVRFTPALIRKIIRSYTREAGVRELERTIGTLCRKVAKKI 564
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
+++E LP+ L S + L GAE + +PM E
Sbjct: 565 VLKDEE--LPN------LTSKTIIKYL--GAE---KFMPMSEEH---------------- 595
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
E ++G RV GL WT GGEV EA ++GKG L LTGQL
Sbjct: 596 ----ESIVG-----------RVN------GLAWTAVGGEVLDTEAVTIKGKGRLILTGQL 634
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDV+KESA+ A T++R+RA L L N + D HIH P GAVPKDGPSAG+T+ T
Sbjct: 635 GDVMKESAETAYTYIRSRAKKLGLKE----NFYESLDTHIHLPEGAVPKDGPSAGITMAT 690
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
A+ S+++ ++VR DTAMTGE+TL G VLP+GG+K+K+LAA ++GIK+V++P +N +DLV+
Sbjct: 691 AMASIYTGRKVRGDTAMTGEITLTGEVLPIGGLKEKLLAAKQFGIKQVLIPIKNKRDLVD 750
Query: 792 VPAAVLASLEIILAKRMEDVLEQAF 816
+P + ++II K +E+VL A
Sbjct: 751 MPKNIQEGIDIIFVKNVEEVLAHAL 775
>gi|392548928|ref|ZP_10296065.1| DNA-binding ATP-dependent protease La [Pseudoalteromonas rubra ATCC
29570]
Length = 787
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 329/778 (42%), Positives = 460/778 (59%), Gaps = 88/778 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R ++ Y+ A + IE +
Sbjct: 72 GTVATVLQL---LKLPDGTVK--VLVEGTQRAKIERFLVTDDYFLAEAQFIASENIEGPE 126
Query: 109 --------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
+ Q ++ L+++ + +S +++ + LAD
Sbjct: 127 QDIFIRSAISQFEGYVKLNKKIPPEVLTSVSGIDETAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A I E+ +L+ ++ RL L++ + ++V +KI +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPIKVPEKQKVLELYNVTDRLEYLMALMEGEIDLLQVEKKIRSRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELG+ DD D+ AL++++ A MP + EL +LK M P T
Sbjct: 231 NEQMKAIQKELGELDDVPDEFEALKKRISEAQMPKEAEEKATSELNKLKMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW+K S+ + DL A++ LD+DHYGL +VK+RIIEYLAV++ +G
Sbjct: 291 VRSYIDTLIGVPWKKRSK-VKKDLANAQKILDADHYGLEKVKERIIEYLAVQQRTNKLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA + GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI
Sbjct: 350 PILCLVGPPGVGKTSLGQSIARSTGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQS 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN +F DHYL V +DLS V+FV
Sbjct: 410 MTKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSSFADHYLEVEYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI L GYT +EKL I+ +HLIP+ + ++GL ++I ++ +
Sbjct: 470 ATSNSFN-IPGPLLDRMEVIRLSGYTEDEKLNISKQHLIPKQIKRNGLKEHEIEIEDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
I+ YTREAGVRNLER L+ L R A + L SKD
Sbjct: 529 IDTIRYYTREAGVRNLERELSKLCRKAVKSI-------LLSKSKD--------------- 566
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGI 638
+V++ LE LG RFD E +RV G+
Sbjct: 567 --------------------------KVVINAENLESYLGVQRFDYGKAEDGDRV---GL 597
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
GL WT GG++ +E A+ GKG+L TG LGDV++ES Q A+T VR RA L++
Sbjct: 598 VTGLAWTEVGGDLLTIECAAVPGKGKLAYTGSLGDVMQESIQAAMTVVRNRAEKLRING- 656
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ + RDIH+H P GA PKDGPSAG+ +VTALVS + VR+D AMTGE+TLRG V
Sbjct: 657 ---DFYEKRDIHVHVPEGATPKDGPSAGIAMVTALVSSLTGNPVRSDVAMTGEITLRGEV 713
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K+LAAHR GIK V++P++N +DL E+P VL LEI ++DVL A
Sbjct: 714 LPIGGLKEKLLAAHRGGIKTVVIPKKNERDLKEIPQNVLEGLEIHPVSWIDDVLSLAL 771
>gi|238751008|ref|ZP_04612504.1| ATP-dependent protease La [Yersinia rohdei ATCC 43380]
gi|238710698|gb|EEQ02920.1| ATP-dependent protease La [Yersinia rohdei ATCC 43380]
Length = 784
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 459/767 (59%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEME-----QVEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE M E E + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPVMDDREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLASLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWSS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIMSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + N L D +E+ G++
Sbjct: 544 LEREISKLCRKA--------------------------VKNLLMDKTVKHIEIT--GDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L+ LG + D A RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++PE N +DL E+P V+A LEI KR++DVL A +
Sbjct: 727 HRGGIKVVLIPEDNKRDLEEIPDNVIADLEIHPVKRIDDVLAIALQN 773
>gi|365848316|ref|ZP_09388793.1| endopeptidase La [Yokenella regensburgei ATCC 43003]
gi|364571024|gb|EHM48623.1| endopeptidase La [Yokenella regensburgei ATCC 43003]
Length = 784
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 332/768 (43%), Positives = 466/768 (60%), Gaps = 89/768 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + L+ G +++++ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITALTDDGDHFSSKAEYLESPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L++ ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKKGELKVDDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKTL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
HE LG RFD ++ RV G GL WT GG++
Sbjct: 576 HE--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
HR GIK V++P+ N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLALALQNA 774
>gi|157146944|ref|YP_001454263.1| DNA-binding ATP-dependent protease La [Citrobacter koseri ATCC
BAA-895]
gi|157084149|gb|ABV13827.1| hypothetical protein CKO_02721 [Citrobacter koseri ATCC BAA-895]
Length = 784
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 460/767 (59%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKKGELTVEDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+V+D L LG RFD A RV G GL WT GG++
Sbjct: 568 ------------IVIDGDNLHDYLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|419353423|ref|ZP_13894709.1| ATP-dependent protease La [Escherichia coli DEC13C]
gi|419358766|ref|ZP_13899997.1| ATP-dependent protease La [Escherichia coli DEC13D]
gi|419363613|ref|ZP_13904795.1| ATP-dependent protease La [Escherichia coli DEC13E]
gi|378208331|gb|EHX68715.1| ATP-dependent protease La [Escherichia coli DEC13D]
gi|378209340|gb|EHX69714.1| ATP-dependent protease La [Escherichia coli DEC13C]
gi|378219633|gb|EHX79900.1| ATP-dependent protease La [Escherichia coli DEC13E]
Length = 784
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 334/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ I +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWIVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|334704790|ref|ZP_08520656.1| ATP-dependent protease La [Aeromonas caviae Ae398]
Length = 784
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 307/664 (46%), Positives = 426/664 (64%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + E++ +L+ + R+ +++ + ++V ++I +V+ Q+ K
Sbjct: 164 RLADTMAAHMPLKLEDKQKVLEIASVSERIEFLMAMMESEIDLLQVEKRIRSRVKKQMEK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELG+ +D D+ AL RK++ AGMP + + Q EL +LK M P
Sbjct: 224 SQREYYLNEQMKAIQKELGELEDSPDEFEALNRKIEEAGMPEDAREKAQAELAKLKMMSP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + +PW KA ++ DL A+E LD+DHYGL +VK RI+EYLAV+
Sbjct: 284 MSAEATVVRSYVDWMVQVPW-KARSKVKKDLGKAQEVLDADHYGLDKVKDRILEYLAVQA 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 343 RVNKLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSM 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG+LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN +FNDHYL V +D
Sbjct: 403 PGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSSFNDHYLEVDYD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + + ++GL +
Sbjct: 463 LSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLVAKQIQRNGLKPSEI 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
I ++ + VI+ YTREAGVR+LER ++ + R A ++ L
Sbjct: 522 TIEDSALIGVIRYYTREAGVRSLEREISKICRKAVKRI---------------------L 560
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LD + + V++ L++ LG RFD +A ++
Sbjct: 561 LDKSIKH---------------------------VQVNQENLKEFLGVQRFDYGKATDQN 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG++ +E T M GKG+L TG LGDV++ES Q A+T VRARA L
Sbjct: 594 QI-GQVCGLAWTEVGGDLLTIETTNMPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEKL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
++ + + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+T
Sbjct: 653 RING----DFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVRADVAMTGEIT 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAAHR GIKRV++P+ N +DL E+PA V LEI + +++VL
Sbjct: 709 LRGEVLPIGGLKEKLLAAHRGGIKRVLIPKENERDLEEIPANVKQDLEIYPVRWIDEVLA 768
Query: 814 QAFE 817
A +
Sbjct: 769 LALQ 772
>gi|431801810|ref|YP_007228713.1| ATP-dependent protease La [Pseudomonas putida HB3267]
gi|430792575|gb|AGA72770.1| ATP-dependent protease La [Pseudomonas putida HB3267]
Length = 798
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/774 (42%), Positives = 467/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ S + A +S ++
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFSEVEGHIRAEVSLID-------- 114
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
+ A R+ + L+S EQ + G + +VL I +L D A
Sbjct: 115 -----EVDAAERESEVFVRTLLSQFEQYVQLGKKVPAEVLSSLNSIEEPGRLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQEILEIVDLPTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRS 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +PW KA ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RGPVL
Sbjct: 290 YLDWLVQVPW-KAQSKVRLDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIAAATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTS 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IPP LLDRMEVI LPGYT +EK+ IA+++L+P+ + +GL + L++ + ++ +
Sbjct: 469 N-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLVPKQVKANGLKKDELEVDVSAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR LER +A + R + Q+Q + +S+
Sbjct: 528 IRFYTREAGVRGLERQIAKVCRKVVKEHTGQKQVKVKVASE------------------- 568
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
LE +LG +F AE+ G GL
Sbjct: 569 ------------------------------QLEHLLGVRKF-RYGLAEQQDQIGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A +
Sbjct: 598 WTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|389580704|ref|ZP_10170731.1| ATP-dependent protease La [Desulfobacter postgatei 2ac9]
gi|389402339|gb|EIM64561.1| ATP-dependent protease La [Desulfobacter postgatei 2ac9]
Length = 791
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 313/774 (40%), Positives = 464/774 (59%), Gaps = 68/774 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G AR + + ++ P GR+ +V +G+ + + E + +++ R+ + +
Sbjct: 84 YDIGTIAR---VQKMIKMPDGRIKALV--QGISKARLVEFVQKRSFFKVRVEIIS----D 134
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEI 165
+E D + AL R K + +L+++ + + +G +L KLAD+ ++ +
Sbjct: 135 VEPDSLDIEIEALMRNVKENSEKLLAL--KGEFSGDVGDLLSHIDSPGKLADLVASNLNL 192
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
E+ +L++ D RL++ +L+ R L V KI V+ ++SK+Q+++ LR+Q++
Sbjct: 193 KVEDGQAILETTDTVARLTRVNDLLARELDLSTVQAKIQTHVKDEISKNQRDYYLREQVK 252
Query: 226 AIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYL 285
AI ELG++DD ++V + K++ +P K K+L RL++M + R YL
Sbjct: 253 AIHRELGESDDKLAEIVDFKEKIKKCKLPEECEKEALKQLTRLEQMHFDSSEASVIRTYL 312
Query: 286 ELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCF 345
+ I +LPW K +++ LD+K A+E L+ +HYGL + K+RI+EYL+VRKL P +G ++CF
Sbjct: 313 DCIVELPWSKTTKDF-LDIKKAEEVLEQNHYGLDKAKERILEYLSVRKLNPKKKGQIICF 371
Query: 346 VGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVG 405
VGPPGVGKTSL +IA A+ RKF R+SLGG++DEA+IRGHRRTYIG+MPGR++ GL++ G
Sbjct: 372 VGPPGVGKTSLGRAIAKAMKRKFHRLSLGGIRDEAEIRGHRRTYIGAMPGRILQGLRQCG 431
Query: 406 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 465
NPV +LDEIDK G+D RGDP+SALLEVLDPEQN F+DHYLN+PFDLS V+FV TAN
Sbjct: 432 TKNPVFMLDEIDKLGNDFRGDPSSALLEVLDPEQNFEFSDHYLNMPFDLSDVLFVLTANM 491
Query: 466 AQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQ 525
A IP LLDRME+I + GYT +EK+ IA +HL+PR L +GL +Q ++ ++
Sbjct: 492 ADTIPSALLDRMELIHISGYTRQEKVVIAKQHLLPRKLKDNGLTRRNIQFSPNAMESIVS 551
Query: 526 RYTREAGVRNLERNLAALARAAAVKVAE-QEQEQALPSSKDVHRLGSPLLDNRLADGAEV 584
YT EAG+R LER L ++ R A K+AE Q+ A+ LG P N +
Sbjct: 552 EYTLEAGLRELERKLDSVCRKIARKIAEGQKGRFAVTCQNLTQYLGPPQYINEM------ 605
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
D+E ++ G++ GL W
Sbjct: 606 -----------------------------------------DQEESQ----VGLATGLAW 620
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GGE ++E + GKGEL LTGQ+G+V++ESA+ ALT+ +A L + E
Sbjct: 621 TEVGGEHLYIETSLFPGKGELQLTGQIGEVMQESARAALTYTKANQEALGIDKE----AF 676
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
DIHIH PAGA+PKDGPSAG+ + TALVS F+ K+V MTGE++LRG VLP+GG+
Sbjct: 677 DSNDIHIHVPAGAIPKDGPSAGIAIATALVSAFTGKKVNNKVGMTGEISLRGRVLPIGGL 736
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
K+K L A R GI VI+PE+N KDL ++P +V + L I K + +VL+ A E
Sbjct: 737 KEKALGALRAGINTVIIPEKNKKDLHDIPKSVKSKLTFICVKDVREVLDFALEA 790
>gi|237730416|ref|ZP_04560897.1| DNA-binding ATP-dependent protease La [Citrobacter sp. 30_2]
gi|226905955|gb|EEH91873.1| DNA-binding ATP-dependent protease La [Citrobacter sp. 30_2]
Length = 784
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 463/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P+ N +DL E+P V+A L I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPDENKRDLEEIPDNVIAELNIHPVKRIEEVLTLALQN 773
>gi|334123165|ref|ZP_08497194.1| ATP-dependent protease La [Enterobacter hormaechei ATCC 49162]
gi|333391039|gb|EGK62162.1| ATP-dependent protease La [Enterobacter hormaechei ATCC 49162]
Length = 784
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ ++ E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDDGEHFSAKAEYLDSPELDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKANELTVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+V++ L LG RFD A RV G GL WT GG++
Sbjct: 568 ------------IVINGDNLHAYLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPYENKRDLEEIPDNVIADLQIHPVKRIEEVLTLALQN 773
>gi|416273475|ref|ZP_11643390.1| DNA-binding ATP-dependent protease La [Shigella dysenteriae CDC
74-1112]
gi|416296135|ref|ZP_11651341.1| DNA-binding ATP-dependent protease La [Shigella flexneri CDC
796-83]
gi|320173741|gb|EFW48924.1| DNA-binding ATP-dependent protease La [Shigella dysenteriae CDC
74-1112]
gi|320186069|gb|EFW60814.1| DNA-binding ATP-dependent protease La [Shigella flexneri CDC
796-83]
Length = 799
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/765 (43%), Positives = 461/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 99 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 156
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 157 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 201 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 261 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 319
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 320 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 379
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 380 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 439
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 440 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 498
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 499 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 558
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 559 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 590
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
H+ LG RF D A+ G GL WT GG++ +E
Sbjct: 591 HD--------------------YLGVQRF-DYGRADNENCVGQVTGLAWTEVGGDLLTIE 629
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHF 713
+ GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H
Sbjct: 630 TACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHVHV 683
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 684 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 743
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 744 GGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 788
>gi|163845685|ref|YP_001633729.1| ATP-dependent protease La [Chloroflexus aurantiacus J-10-fl]
gi|222523393|ref|YP_002567863.1| ATP-dependent protease La [Chloroflexus sp. Y-400-fl]
gi|163666974|gb|ABY33340.1| ATP-dependent protease La [Chloroflexus aurantiacus J-10-fl]
gi|222447272|gb|ACM51538.1| ATP-dependent protease La [Chloroflexus sp. Y-400-fl]
Length = 807
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 336/763 (44%), Positives = 461/763 (60%), Gaps = 71/763 (9%)
Query: 60 GVEKPSGRV------TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP 113
GVE RV T VVLEG R + + T + R+ + T +E +++D
Sbjct: 83 GVEATVQRVRRLPDGTLSVVLEGRQRMQIVSVVTE--HPALRVLA---TPLETPPLDEDA 137
Query: 114 DFI--ALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQL 171
+ ALSR T E I L + L P +LADI A IS E++
Sbjct: 138 ALMVEALSRTI-LTTFEKIVRLSRNLPDDAYLSALNSAEP-GELADIIAALLPISVEDRQ 195
Query: 172 VMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL 231
+L D++ RL + L+ + L + + +I +V+ ++ +SQ+E LR+Q+RAI+ EL
Sbjct: 196 RILALADIQQRLRQLEILLAKELDLLELENRIHSQVQQEVDRSQRELFLREQLRAIQREL 255
Query: 232 GDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADL 291
G D +++ L + +AG+P++ ++EL RL+ + P P + R YL+ + L
Sbjct: 256 GQEDPSRREIMLLRERAAAAGLPAHAMARFEEELARLELISPMSPEHGMLRTYLDWLISL 315
Query: 292 PWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK-PDARGPVLCFVGPPG 350
PW AS E + DL+AA L+ +HYGL +VK RI+EY+AVR+L P R P+LCFVGPPG
Sbjct: 316 PWSNASPE-NRDLRAAAAVLERNHYGLRKVKDRILEYIAVRQLAGPSRRAPILCFVGPPG 374
Query: 351 VGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPV 410
VGKTSL SIA ALGR+F+R+SLGGV DEA+IRGHRRTYIG+MPGR++ +K G NPV
Sbjct: 375 VGKTSLGQSIAEALGRRFVRLSLGGVHDEAEIRGHRRTYIGAMPGRILQRMKVAGTINPV 434
Query: 411 MLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIP 470
+LDE+DK GSD RGDPA+ALLEVLDPEQN TF+DHYL++P+DLS+ +F+ TAN A IP
Sbjct: 435 FMLDEVDKLGSDFRGDPAAALLEVLDPEQNSTFSDHYLDLPYDLSQTLFITTANVADDIP 494
Query: 471 PPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTRE 530
PLLDRME++ELPGYT +EKL IA R LIPR + GL ++ +A + +I+ YT E
Sbjct: 495 DPLLDRMELVELPGYTEDEKLHIARRFLIPRQMTDSGLPPATIRFGDATIHTIIRNYTYE 554
Query: 531 AGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIP 590
AGVRNLER + A+ R A R+A+G ++ P
Sbjct: 555 AGVRNLEREIGAICRKIA---------------------------RRIAEGRRYPRQITP 587
Query: 591 MGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGE 650
L K+LGPPRF+ + R G+++G+V+T+ GG+
Sbjct: 588 RA----------------------LPKLLGPPRFEIGKIDPRDQV-GVAIGMVYTSAGGD 624
Query: 651 VQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIH 710
+ VE M GKG L LTGQLG+V++ESAQ AL++ RA A+ L + L DIH
Sbjct: 625 IMPVEVVLMDGKGNLLLTGQLGEVMQESAQAALSFARANASRLGIEIRHFDKL----DIH 680
Query: 711 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILA 770
+H P GA PKDGPSAGVT+ TAL+S + + VR D AMTGE+TL G VLP+GGVK+K+L
Sbjct: 681 VHVPEGATPKDGPSAGVTIATALISALTGRTVRHDIAMTGEITLHGRVLPIGGVKEKVLG 740
Query: 771 AHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
A+R GI+++ILP RN DLVE+P A+ L I L +R+E LE
Sbjct: 741 AYRAGIRQIILPRRNEHDLVEIPVALRRQLTIHLIERIEQALE 783
>gi|418293283|ref|ZP_12905196.1| ATP-dependent protease La [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379064679|gb|EHY77422.1| ATP-dependent protease La [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 798
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 332/774 (42%), Positives = 465/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R ++ + A +S ++ +++
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGVIERFVEVDDHCRAEVSLIDEAEVD--- 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
+R+ + L+S EQ + G + +VL I +L D A
Sbjct: 120 ----------ARESEVFTRSLLSQFEQYVQLGKKVPAEVLSSLSSIDEPARLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQQILEITDLPARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+ + + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDIDEGHNEIDDLKKRIENAGLSKDAYTKAQAELNKLKQMSPMSAEATVVRT 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
Y++ + ++PW KA+ ++ LDL A+E LD+DHYGL VK RI+EYLAV+K +GPVL
Sbjct: 290 YIDWLVNVPW-KAASKVRLDLTKAEEVLDADHYGLEEVKDRILEYLAVQKRVKKLKGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA + RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIARSTNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ TA
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTA 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IP PLLDRMEVI LPGYT +EK+ IA R+L P+ + +GL + L E+ ++ +
Sbjct: 469 N-SMNIPAPLLDRMEVIRLPGYTEDEKINIATRYLAPKQIQANGLKKDELAFQESAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR+LER LA + R KV ++
Sbjct: 528 IRYYTREAGVRSLERQLAKVCR----KVVKE----------------------------- 554
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
H F + VD LE LG +F AE+ G GL
Sbjct: 555 ------------HASDKRFHVN----VDADSLEHFLGVRKF-RYGLAEQQDQVGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG L TG LG+V+ ES ALT VR+RAT L L A +
Sbjct: 598 WTQVGGELLTIEAAVVPGKGRLTKTGSLGEVMGESITAALTVVRSRATSLGLAA----DF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ +DIHIH P GA PKDGPSAG+ + T+LVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKQDIHIHVPEGATPKDGPSAGIGMCTSLVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N +DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENQRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|424836931|ref|ZP_18261568.1| DNA-binding ATP-dependent protease La [Shigella flexneri 5a str.
M90T]
gi|383465983|gb|EID61004.1| DNA-binding ATP-dependent protease La [Shigella flexneri 5a str.
M90T]
Length = 784
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 463/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G +GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVIGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|146644|gb|AAA24079.1| ATP-dependent proteinase (lon) [Escherichia coli]
Length = 797
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 335/775 (43%), Positives = 464/775 (59%), Gaps = 89/775 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPWRQHS 826
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A + HS
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMHHS 781
>gi|334136446|ref|ZP_08509912.1| endopeptidase La [Paenibacillus sp. HGF7]
gi|333606056|gb|EGL17404.1| endopeptidase La [Paenibacillus sp. HGF7]
Length = 779
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 316/763 (41%), Positives = 457/763 (59%), Gaps = 85/763 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP---------- 113
P+G T V++EG+ R + E +Y +++ E+ + E+ E D
Sbjct: 84 PNG--TIRVLVEGVVRAEIAEYIANDEFY--EVNAKELPEEEVNDAEIDALMRTVLNQFE 139
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
+I LS++ + +S +++ GR LAD+ + + +++ +
Sbjct: 140 HYITLSKKVTPETLAAVSDIDEP----GR------------LADVICSHLSLKIKDKQDI 183
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L++VD++ RL K +++ + + + KI+Q+V+ Q+ K+QKE+ LR+QM+AI++ELGD
Sbjct: 184 LETVDVRSRLEKLLSILNNEREVLELERKISQRVKKQMEKTQKEYYLREQMKAIQKELGD 243
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
+ ++ L ++ ++ +P N+ + ++KE+ RL+KM + R Y++ + LPW
Sbjct: 244 KEGRAGEIEELRSQLAASEVPENVQEKIEKEIDRLEKMPSTSAEGSVIRNYIDWLLALPW 303
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
K +E+ DLD+ A+E L++DHYGL + K+R++EYLAV+KL +GP+LC GPPGVGK
Sbjct: 304 TKKTED-DLDIHKAEEILNADHYGLEKPKERVLEYLAVQKLVKKLKGPILCLSGPPGVGK 362
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TS+A SIA ++ R+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I +K G NPV LL
Sbjct: 363 TSIARSIAKSMNREFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQAMKTAGSVNPVFLL 422
Query: 414 DEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPL 473
DEIDK D RGDPA+ALLEVLDPEQN TF+DH++ VPFDLS V+F+ TAN IP PL
Sbjct: 423 DEIDKMAMDFRGDPAAALLEVLDPEQNNTFSDHFIEVPFDLSNVMFITTANALHNIPRPL 482
Query: 474 LDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGV 533
LDRMEV+ LPGYT EKL IA +L+P+ HGL + + + VI+ YTREAGV
Sbjct: 483 LDRMEVLYLPGYTEIEKLEIADSYLLPKQKRDHGLEDGQMVMNRDALLQVIREYTREAGV 542
Query: 534 RNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGE 593
RNLE+ LAA+ R A K+ + P G VE+ V + E
Sbjct: 543 RNLEQQLAAICRKTAKKI-----------------VSDP--------GRTVEVTVDTVKE 577
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
LGPP+F AE G GL WT GG+
Sbjct: 578 D------------------------LGPPKF-RYNMAEEQDQIGAVTGLAWTEVGGDTLV 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E T M G G+L LTG+LGDV+KESAQ A ++ R+RA L++ + + DIHIH
Sbjct: 613 IEVTVMPGSGKLTLTGKLGDVMKESAQAAFSYTRSRAEQLKIAP----DFHEKNDIHIHI 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA+PKDGPSAG+T+ TAL+S + V + AMTGE+TLRG VLP+GG+K+K LAAHR
Sbjct: 669 PEGAIPKDGPSAGITMGTALISALTNIPVSSQVAMTGEITLRGRVLPIGGLKEKALAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GI+ ++LP+ N KD+ ++P +V L I M+ VLE A
Sbjct: 729 AGIRTILLPKDNEKDIRDIPESVRNDLTFIPVAHMDQVLEHAL 771
>gi|161504373|ref|YP_001571485.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160865720|gb|ABX22343.1| hypothetical protein SARI_02484 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 784
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L + ++ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLKN-------IVINGDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTFALQN 773
>gi|366160315|ref|ZP_09460177.1| DNA-binding ATP-dependent protease La [Escherichia sp. TW09308]
Length = 784
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/765 (43%), Positives = 462/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
H+ LG RF D A+ + G GL WT GG++ +E
Sbjct: 576 HD--------------------YLGVQRF-DYGRADNENSVGQVTGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHF 713
+ GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H
Sbjct: 615 TACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|401762534|ref|YP_006577541.1| DNA-binding ATP-dependent protease La [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|295096774|emb|CBK85864.1| ATP-dependent proteinase. Serine peptidase. MEROPS family S16
[Enterobacter cloacae subsp. cloacae NCTC 9394]
gi|400174068|gb|AFP68917.1| DNA-binding ATP-dependent protease La [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 784
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ ++ E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDDGEHFSAKAEYLDSPELDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKANELTVEDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+V++ L LG RFD A RV G GL WT GG++
Sbjct: 568 ------------IVINGDNLHAYLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPYENKRDLEEIPDNVIADLQIHPVKRIEEVLTLALQN 773
>gi|309791201|ref|ZP_07685733.1| ATP-dependent protease La [Oscillochloris trichoides DG-6]
gi|308226763|gb|EFO80459.1| ATP-dependent protease La [Oscillochloris trichoides DG6]
Length = 811
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 323/718 (44%), Positives = 443/718 (61%), Gaps = 67/718 (9%)
Query: 113 PDFIALSRQFKATAME----LISVLEQKQKTGGRTKVLLETV--PIHKLADIFVASFEIS 166
PD + S Q +A +E + +VLE + + + ++ P H LAD S + +
Sbjct: 125 PDHVVPSPQLEALILETRAVIDAVLELRPGVSQEVRNFVRSIEDPGH-LADNTGYSPDYT 183
Query: 167 FEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRA 226
F E+ +L++ DL RL+K + L + V +I +V+ +K Q++F LRQQ+RA
Sbjct: 184 FAERQDLLETFDLIARLTKVRDFYRVQLALLEVQNRIRNEVQESAAKQQRDFFLRQQIRA 243
Query: 227 IKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLE 286
I++ELGD+DD+ DL L K+ A M + K +EL RL+++ P Y R YLE
Sbjct: 244 IQKELGDDDDEVSDLDDLRAKLARAQMSDVVRKEADRELNRLQRLNESSPEYQMVRTYLE 303
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD--------A 338
+A+LPW + +D+ A++ LD DHYGL ++K+RI+EYLAV++ + +
Sbjct: 304 WLAELPWNNPTGS-PIDIGVARQVLDEDHYGLTKIKERILEYLAVKQRRAELGDDHGRAG 362
Query: 339 RGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLI 398
R P+L FVGPPGVGKTSL SIA ALGR F+R+SLGGV+DEA++RG RRTYIGS PGRLI
Sbjct: 363 REPILAFVGPPGVGKTSLGQSIARALGRNFVRMSLGGVRDEAELRGFRRTYIGSQPGRLI 422
Query: 399 DGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVI 458
L+R G +PV+LLDEIDK G+D RGDPASALLEVLDPEQN TF DHYLN+PFDLS+V+
Sbjct: 423 QELRRAGSSDPVILLDEIDKLGNDYRGDPASALLEVLDPEQNNTFTDHYLNLPFDLSQVL 482
Query: 459 FVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEA 518
F+ATAN +PP L DRMEVI+L GY +EK++IA HL+PR L +GL ++ EA
Sbjct: 483 FIATANSWDNVPPALRDRMEVIDLSGYIEDEKVQIAQTHLVPRQLRANGLRPSEAEVSEA 542
Query: 519 MVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRL 578
++ +I YTREAGVRNLER++ + R ++AEQ + PS
Sbjct: 543 ALRTIIGDYTREAGVRNLERHIGGVLRKVTRRLAEQNE----PSE--------------- 583
Query: 579 ADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGI 638
+ VVD A + LG R+ + EA ER+ PG+
Sbjct: 584 ---------------------------AAFVVDPAFVRTALGRQRYYN-EAKERIDQPGV 615
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
+ G+VWT GG++ FVEA A+ G EL +TGQLG+V+ ESA+ ALT+VR+RA +L +
Sbjct: 616 ATGMVWTPVGGDIIFVEAVAVEGNRELKITGQLGEVMCESAEAALTYVRSRARELGI--- 672
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
IHIH PAGAVPKDGPSAG+T+ TAL S + + VR D AMTGE++LRG V
Sbjct: 673 -DPAFFDHHAIHIHVPAGAVPKDGPSAGITMATALASAATGRLVRDDVAMTGEISLRGRV 731
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K L AHR GI+ +ILP RN DL ++P V +L + ++ VL+ A
Sbjct: 732 LPIGGIKEKALGAHRAGIRTIILPRRNEGDLDDLPREVFDALTFVPVDTLDQVLQTAL 789
>gi|308050306|ref|YP_003913872.1| ATP-dependent proteinase [Ferrimonas balearica DSM 9799]
gi|307632496|gb|ADN76798.1| ATP-dependent proteinase [Ferrimonas balearica DSM 9799]
Length = 785
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 308/664 (46%), Positives = 425/664 (64%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + ++ +++ VD+ RL ++ + ++V +KI +V+ Q+ K
Sbjct: 164 RLADTMAAHMPLKLADKQAVVEMVDVGERLEYLMATMESEIDILQVEKKIRTRVKKQMEK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELG+ DD D+ AL +K+ A MP+ + EL +LK M P
Sbjct: 224 SQREYYLNEQMKAIQKELGELDDAPDEFEALSKKIDEARMPTEAKEKTVAELNKLKMMSP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + +PW K S+ + DL A E LD+DH+GL +VK+RI+EYLAV+
Sbjct: 284 MSAEATVVRSYVDWMVSVPWAKRSK-VKKDLSVASEVLDADHFGLDKVKERILEYLAVQA 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 343 RVKQLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSM 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG+LI + +VGV NP+ LLDEIDK SD+RGDP+SALLEVLDPEQN FNDHYL V +D
Sbjct: 403 PGKLIQKMSKVGVKNPLFLLDEIDKMSSDMRGDPSSALLEVLDPEQNSAFNDHYLEVDYD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA++HL+P+ L ++G+ + L
Sbjct: 463 LSDVMFVATSN-SMAIPGPLLDRMEVIRLSGYTEDEKLNIALQHLLPKQLKRNGVKPDEL 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ E+ + +I+ YTREAGVR+LER ++ + R A ++ LG
Sbjct: 522 VVEESAIIGIIRYYTREAGVRSLEREISKICRKAVKQIL----------------LG--- 562
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
R P+VV+ L++ LG RFD +A E
Sbjct: 563 -----------------------------RSDKPVVVNGDNLKEFLGVQRFDYGKAEESN 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG++ +E T++ GKG+L TG LGDV++ES Q A+T VRARA L
Sbjct: 594 QI-GQVTGLAWTEVGGDLLTIETTSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEKL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
++ + + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+T
Sbjct: 653 RVAG----DFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVRADVAMTGEIT 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAAHR GIKRV++P+ N +DL E+P V A L+I + +++VL
Sbjct: 709 LRGEVLPIGGLKEKLLAAHRGGIKRVLIPKENERDLEEIPDNVKADLDIRAVRWIDEVLS 768
Query: 814 QAFE 817
A E
Sbjct: 769 LALE 772
>gi|365104951|ref|ZP_09334343.1| lon protease [Citrobacter freundii 4_7_47CFAA]
gi|420370114|ref|ZP_14870730.1| ATP-dependent protease La [Shigella flexneri 1235-66]
gi|363643892|gb|EHL83196.1| lon protease [Citrobacter freundii 4_7_47CFAA]
gi|391320543|gb|EIQ77375.1| ATP-dependent protease La [Shigella flexneri 1235-66]
Length = 784
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 463/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P+ N +DL E+P V+A L I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPDENKRDLEEIPDNVIADLNIHPVKRIEEVLTLALQN 773
>gi|381405440|ref|ZP_09930124.1| DNA-binding ATP-dependent protease La [Pantoea sp. Sc1]
gi|380738639|gb|EIB99702.1| DNA-binding ATP-dependent protease La [Pantoea sp. Sc1]
Length = 784
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 327/771 (42%), Positives = 462/771 (59%), Gaps = 90/771 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + L+ G ++ A+ L +IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRAHITTLADNGDHFVAQAEYLVSPEIEEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNNIDDAAR----------------LADTVAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYEALKRKIDAAKMPEEAREKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRKAQETLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKASEITVEDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A + S L+D
Sbjct: 544 LERELSKLCRKA---------------------VKSLLMD-------------------- 562
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
+ + +D L+ LG RFD ++ RV G GL WT GG++
Sbjct: 563 -------KTKKHITIDGENLKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
HR GIK V++P+ N +DL ++P V+A L I KR+E+VL A E P+
Sbjct: 727 HRGGIKTVLIPDDNKRDLEDIPQNVIADLAIHPVKRIEEVLNLALE-NAPY 776
>gi|449472607|ref|XP_004153645.1| PREDICTED: lon protease-like, partial [Cucumis sativus]
Length = 862
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ ++ E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDDGEHFSAKAEYLDSPELDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKANELTVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+V++ L LG RFD A RV G GL WT GG++
Sbjct: 568 ------------IVINGDNLHAYLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPYENKRDLEEIPDNVIADLQIHPVKRIEEVLTLALQN 773
>gi|237756437|ref|ZP_04584976.1| ATP-dependent protease La [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691402|gb|EEP60471.1| ATP-dependent protease La [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 770
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 318/753 (42%), Positives = 468/753 (62%), Gaps = 71/753 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
++++G+ R ++EL YY +E+ IE +VE+ + AL K + IS
Sbjct: 67 ILVQGVSRGRIKELKKVDDYY-----QVEVEIIEDPEVEETLEVQALKHSLKDLLDKAIS 121
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
+ KQ +++ +LAD+ + +I EE +L+ +D RL +
Sbjct: 122 L--GKQIVPDLVEIIKSVEESGRLADLVASILDIKAEEAQQILEILDPVERLRFVHDKFL 179
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ + + + +KI + K Q+E+ LRQQ++AI+EELG+ D+ ++++ ++K++ +
Sbjct: 180 KEVGILELQQKIRISAREAIEKDQREYFLRQQIKAIQEELGERDEKQEEIENYKKKIEES 239
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMP I + K+L+RL+KM P R YL+ + +LPW K +++ +DLK AK+ L
Sbjct: 240 GMPDEIKEEALKQLKRLEKMHPDSAEAGVIRTYLDWLVELPWNKRTKD-RIDLKIAKKIL 298
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDA------RGPVLCFVGPPGVGKTSLASSIASALG 365
D DHY L ++K+RI+EYLAV KLK ++ +GP+LCFVGPPGVGKTSL SIA AL
Sbjct: 299 DEDHYDLEKIKERILEYLAVLKLKKESSKDKSIKGPILCFVGPPGVGKTSLGRSIAKALN 358
Query: 366 RKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRG 425
RKF+RISLGGV+DEA+IRGHRRTY+G+MPG++I +K+ G NPV++LDE+DK G D RG
Sbjct: 359 RKFVRISLGGVRDEAEIRGHRRTYVGAMPGKIIQAIKQAGTKNPVIMLDEVDKIGLDFRG 418
Query: 426 DPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGY 485
DP +ALLEVLDPEQNK F DHYL VPFDLS+V+F+ TANR IP PLLDRMEVI L GY
Sbjct: 419 DPTAALLEVLDPEQNKEFVDHYLGVPFDLSEVMFICTANRLDTIPRPLLDRMEVIRLSGY 478
Query: 486 TPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALAR 545
+ EEKL IA ++LIP+ L ++GL + ++ + + +I+ YTREAGVRNLER + ++ R
Sbjct: 479 SEEEKLHIAKKYLIPKQLKENGLDEKTVEFSDKAITFLIRGYTREAGVRNLERQIGSIIR 538
Query: 546 AAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
A K+ E +++ ++IT
Sbjct: 539 KIAKKIIETGKKK------------------------------------------KYKIT 556
Query: 606 SPLVVDEAMLEKVLGPPRFD-DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGE 664
L+ +K LG P + ++E + + G+ GL WT GGE+ +E T M GKG
Sbjct: 557 PSLI------KKFLGAPIYSTEKEERDEI---GVVTGLAWTEVGGEILKIEVTKMDGKGN 607
Query: 665 LHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPS 724
L LTG LGDV+KESA+IA ++V+++A +L + E+ D+HIH PAGA+PKDGPS
Sbjct: 608 LVLTGSLGDVMKESARIAFSYVKSKAKELGIDPEE----FGKYDLHIHVPAGAIPKDGPS 663
Query: 725 AGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPER 784
AG+ + T + S+F+ + VR+D AMTGE+TLRG VLPVGG+K+KILAA R GIK VILP+
Sbjct: 664 AGIAITTGIASVFTNRPVRSDVAMTGEITLRGKVLPVGGLKEKILAAKRAGIKTVILPKD 723
Query: 785 NLKDLV-EVPAAVLASLEIILAKRMEDVLEQAF 816
N ++++ ++P V S+ +I +++V + A
Sbjct: 724 NKEEVMSDLPPYVRKSMNLIFVDHIDEVFKIAL 756
>gi|404399559|ref|ZP_10991143.1| ATP-dependent protease La [Pseudomonas fuscovaginae UPB0736]
Length = 798
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 337/776 (43%), Positives = 465/776 (59%), Gaps = 83/776 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ S + A+++ +E T
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGTVEHFSEVDGHCRAQVTLIEET------ 116
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPI---HKLADIFVASF 163
+ PD R+ + L+S EQ + G + +VL I +L D A
Sbjct: 117 --EAPD-----RESEVFVRSLLSQFEQYVQLGKKVPAEVLSSLNSIDEPSRLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ ++L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQDILEIIELPARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++ AG+P + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDGDEGHNEIEELKKRIDDAGLPKDALTKAQAELNKLKQMSPMSAEATVVRS 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +PW KA ++ LDLK A++ LD+DHYGL VK+RI+EYLAV+K RGPVL
Sbjct: 290 YLDWLVQVPW-KAQSKVRLDLKRAEDILDADHYGLDEVKERILEYLAVQKRVKKIRGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTS 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IPP LLDRMEVI LPGYT +EK+ IA ++L P+ ++ +GL L+ + ++ +
Sbjct: 469 N-SMNIPPALLDRMEVIRLPGYTEDEKINIATKYLSPKQIEANGLKKGELEFEDEAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR LER +A + R A
Sbjct: 528 IRYYTREAGVRGLERQIAKVCRKAV----------------------------------- 552
Query: 584 VEMEVIPMGESTHEVSNTF--RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVG 641
H V F +ITS L LE LG +F AE+ G G
Sbjct: 553 ----------KEHAVEKRFSVKITSDL------LEHFLGVRKF-RYGLAEQQDQVGQVTG 595
Query: 642 LVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGM 701
L WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + +
Sbjct: 596 LAWTQVGGELLTIEAAVVPGKGQLIKTGSLGDVMVESITAAQTVVRSRAKSLGI----PL 651
Query: 702 NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPV 761
+ + RD HIH P GA PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +
Sbjct: 652 DFHEKRDTHIHMPEGATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAI 711
Query: 762 GGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 712 GGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|163858167|ref|YP_001632465.1| ATP-dependent protease La [Bordetella petrii DSM 12804]
gi|163261895|emb|CAP44197.1| ATP-dependent protease La [Bordetella petrii]
Length = 782
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 324/766 (42%), Positives = 456/766 (59%), Gaps = 76/766 (9%)
Query: 60 GVEKPSGRV------TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP 113
G E P R + ++++G RF V E + AR++ + + Q E
Sbjct: 73 GTEGPIARYITGQDGAHHLLVQGQSRFRVLEFLDGWPFMVARVAEIPAAEDHDSQTE--- 129
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
A Q K A++ I++L +E+ + LAD+ +I E++ +
Sbjct: 130 ---ARFLQLKEQAIDAITLLPNVPDELIGVVRGIESAGL--LADMVTHMIDIKPEQKQDI 184
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L++ DL RL + EL+ ++ +R++++I + Q + Q+E +LR+Q+R I++ELGD
Sbjct: 185 LETFDLSRRLDQVIELLAGRVEVLRLSKEIGDRTRAQFDERQRETVLREQLRQIQKELGD 244
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
DD ++ L+ +++AGMP + H +KEL RL++M R YLE + +LPW
Sbjct: 245 VDDSAAEVARLKDAIEAAGMPDEVLSHARKELGRLQRMGETSGESAMLRTYLEWLTELPW 304
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
K + +DL A++ LD DH+GL ++K+RI+EYLAVRKL P R P+LCF GPPGVGK
Sbjct: 305 -KQQPQPPIDLAEARKVLDEDHFGLDKIKRRILEYLAVRKLNPQGRSPILCFAGPPGVGK 363
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSL SIA A GR F R++LGGV DEA+IRGHRRTY+G++PG +I ++R G N V++L
Sbjct: 364 TSLGQSIARATGRVFQRVALGGVHDEAEIRGHRRTYLGALPGNIIQAMRRAGTNNAVVML 423
Query: 414 DEIDKTGS-DVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
DEIDK G+ GDP SALLEVLDPEQN F D+YL V FDLS V+F+ TAN + IP P
Sbjct: 424 DEIDKLGAGGFHGDPGSALLEVLDPEQNHKFRDNYLGVDFDLSHVMFICTANMLETIPGP 483
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DRME+I+LPGYT EEK++IA R+L+ R L+ +GL + ++ +A + ++ YTREAG
Sbjct: 484 LRDRMEIIQLPGYTEEEKVQIARRYLVRRQLEANGLTAGQAELSDAALSSIVGDYTREAG 543
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VR LER + A+ R AA+++AE G
Sbjct: 544 VRQLEREIGAVLRHAAMQIAE--------------------------------------G 565
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
++TH + +D L +LG RF++ E A R PG++ GL WT GG++
Sbjct: 566 KATH-----------VAIDAPDLPAILGAHRFEN-EVALRTGVPGVATGLAWTPVGGDIL 613
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
F+EA+ G G L LTGQLGDV+KESAQ ALT + + D L+ D+HIH
Sbjct: 614 FIEASKTPGSGRLILTGQLGDVMKESAQAALTLAKIWSGD----------SLEKTDVHIH 663
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
PAGA PKDGPSAGV + AL SL S + VR+D AMTGE++LRGLVLP+GGVK+K LAA
Sbjct: 664 VPAGATPKDGPSAGVAMFLALASLLSGRPVRSDVAMTGEISLRGLVLPIGGVKEKTLAAL 723
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
R GI V++P RN KDL +VPA A L+ +L R+ED + A +G
Sbjct: 724 RAGITTVMIPRRNEKDLDDVPAEARAKLKFLLLDRIEDAIRYAIDG 769
>gi|378956162|ref|YP_005213649.1| Lon protease [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|357206773|gb|AET54819.1| Lon protease [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
Length = 784
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 465/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L++ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDLPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|417860285|ref|ZP_12505341.1| ATP-dependent protease LA [Agrobacterium tumefaciens F2]
gi|338823349|gb|EGP57317.1| ATP-dependent protease LA [Agrobacterium tumefaciens F2]
Length = 805
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/795 (41%), Positives = 456/795 (57%), Gaps = 85/795 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ ASD + IH G A L L ++ P G V V++EG R + E + R
Sbjct: 56 TQINASDDDPTPDAIH--KVGTVANVLQL---LKLPDGTVK--VLVEGKGRAQIDEYTGR 108
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLE 148
+Y A + L+ E E + ALSR ++S E K K+ E
Sbjct: 109 EDFYEASATPLQ------EPAEDPVEIEALSRS-------VVSEFESYVKLN--KKISPE 153
Query: 149 TV-------PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAE 201
V KLAD + I E+ ML++V +K RL KA ++ + ++V +
Sbjct: 154 VVGAAGQIDDYSKLADTVASHLSIKITEKQEMLETVSVKQRLEKALGFMEGEISVLQVEK 213
Query: 202 KITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHV 261
+I +V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D++ LE ++ +
Sbjct: 214 RIRSRVKRQMEKTQREYYLNEQMKAIQKELGDGEDGRDEMAELEERIAKTKLSKEAKDKA 273
Query: 262 QKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRV 321
+ E+++L++M P T R YL+ + LPW K S+ I DL AA+ LD DH+GL +V
Sbjct: 274 EAEMKKLRQMSPMSAEATVVRNYLDWLLGLPWGKKSK-IKTDLNAAETILDQDHFGLDKV 332
Query: 322 KQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEAD 381
K+RI+EYLAV+ RGP+LC VGPPGVGKTSLA SIA A GR+++R++LGGV+DEA+
Sbjct: 333 KERIVEYLAVQARATKIRGPILCLVGPPGVGKTSLAKSIAKATGREYVRMALGGVRDEAE 392
Query: 382 IRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK 441
IRGHRRTYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN
Sbjct: 393 IRGHRRTYIGSMPGKIVQSMKKAKKANPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNS 452
Query: 442 TFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPR 501
TF DHYL V +DLS V+FV TAN IP PL+DRMEVI + GYT +EK IA RHL+P+
Sbjct: 453 TFMDHYLEVEYDLSDVMFVTTANTLN-IPGPLMDRMEVIRIAGYTEDEKREIAKRHLLPK 511
Query: 502 VLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALP 561
+ +H L E + + + +VIQ+YTREAGVR+ ER L LAR A ++ + +
Sbjct: 512 AIKEHALRPEEFSVSDDALMIVIQQYTREAGVRSFERELMKLARKAVTEIIKGK------ 565
Query: 562 SSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGP 621
+ +T+ V D LG
Sbjct: 566 -------------------------------------VKSVEVTAANVPD------YLGV 582
Query: 622 PRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
PRF E AER G+ GL WT GGE+ +E M GKG + +TG L +V+KES
Sbjct: 583 PRFRHGE-AEREDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLKEVMKESISA 641
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA D + DIH+H P GA PKDGPSAGV + TA+VS+ +
Sbjct: 642 AASYVRSRAVDFGIEPPR----FDKSDIHVHVPEGATPKDGPSAGVAMATAIVSIMTGIP 697
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
V D AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL E+P V +E
Sbjct: 698 VSKDVAMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLAEIPDNVKNEME 757
Query: 802 IILAKRMEDVLEQAF 816
II RM +V+E A
Sbjct: 758 IIPVSRMGEVIEHAL 772
>gi|322435043|ref|YP_004217255.1| ATP-dependent protease La [Granulicella tundricola MP5ACTX9]
gi|321162770|gb|ADW68475.1| ATP-dependent protease La [Granulicella tundricola MP5ACTX9]
Length = 807
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 319/769 (41%), Positives = 468/769 (60%), Gaps = 80/769 (10%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ + V+ P G + V++EG+ R E++ ++ A + + P
Sbjct: 81 NIVQSVKMPDGNIK--VLVEGVERARAVEMNDEDGFFVATVRT-------------GPTH 125
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIH-------KLADIFVASFEISFE 168
+ ++ Q +A + ++ EQ K + + ET+ KLAD A+ ++S E
Sbjct: 126 LEMTPQVEAMMQRVHTLFEQYVKL--QQSLNYETMAASVRGDEPSKLADTIAANLQLSIE 183
Query: 169 EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIK 228
E+ +L+ D +VRLSK +++D ++ + + + +V+ Q+ K+QKE+ L ++++AI+
Sbjct: 184 EKQELLEVFDPEVRLSKIADVLDVAIEKLNIDRTVQSRVKRQMEKAQKEYYLNEKIKAIQ 243
Query: 229 EELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELI 288
+ELG + E D L++K+++AGMP ++ + +EL++L+ M P T SR YL+ +
Sbjct: 244 KELGRGEKSEFD--ELKKKIETAGMPKDVLEKSMQELKKLEAMPPMSAESTVSRNYLDWL 301
Query: 289 ADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGP 348
+PW K S+EI ++ A+E L+ DHYGL ++K+RI+E+LAVR+L + +G +LCFVGP
Sbjct: 302 LAVPWRKRSKEIR-SIQLAEEVLNKDHYGLEKIKERILEFLAVRQLVKNPKGSILCFVGP 360
Query: 349 PGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCN 408
PGVGKTSL SIA A GRKF+R+SLGGV+DEA+IRGHRRTYIG++PG++I +K+ G N
Sbjct: 361 PGVGKTSLGQSIAKATGRKFVRMSLGGVRDEAEIRGHRRTYIGALPGQVIQSMKKAGTKN 420
Query: 409 PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQP 468
PV +LDEIDK SD RGDPASALLEVLDPEQN F DHYL+V +DLS+V+FVATAN
Sbjct: 421 PVFMLDEIDKMASDFRGDPASALLEVLDPEQNNKFQDHYLDVEYDLSQVLFVATANVLDT 480
Query: 469 IPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYT 528
IP PL DRME+I L GYT EKL IA ++L+ + + +GL E +Q + +K +I+ YT
Sbjct: 481 IPGPLQDRMEIIRLSGYTEIEKLEIAKQYLVKKQREGNGLTEEQIQFEDGALKSLIRGYT 540
Query: 529 REAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEV 588
REAGVRNLER + + R A KV + DG E
Sbjct: 541 REAGVRNLEREIGNVGRKVARKVVQ--------------------------DGPE----- 569
Query: 589 IPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFG 648
LV E LE +LG +F D E ++ + G+ GL WT+ G
Sbjct: 570 ----------------HKELVTAEN-LESLLGVAKFRDSEVHKK-SEIGLVTGLAWTSVG 611
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
G + E + GKG+L TGQLGDV+KESA+ AL++ R+RA L L E + D
Sbjct: 612 GVILQTEVQVLDGKGKLTATGQLGDVMKESAEAALSYTRSRAAHLGLSKE----FYRHVD 667
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
IH+H P GA PKDGPSAG+T+ T L S ++ +VR D AMTGE+TLRG VLP+GG+K+K+
Sbjct: 668 IHVHVPEGATPKDGPSAGITIATGLASALTKIKVRRDIAMTGEITLRGKVLPIGGLKEKL 727
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LAAHR G+ ILP N KDL ++P + ++++ + M++VL+ A E
Sbjct: 728 LAAHRAGVFEAILPADNRKDLADLPDLIKNTMKLHFVEEMDEVLQIALE 776
>gi|419038184|ref|ZP_13585244.1| ATP-dependent protease La [Escherichia coli DEC2E]
gi|419230896|ref|ZP_13773688.1| ATP-dependent protease La [Escherichia coli DEC9B]
gi|377898428|gb|EHU62788.1| ATP-dependent protease La [Escherichia coli DEC2E]
gi|378082724|gb|EHW44667.1| ATP-dependent protease La [Escherichia coli DEC9B]
Length = 734
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 34 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 91
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 92 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 135
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 136 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 195
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 196 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 254
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 255 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 314
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 315 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 374
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 375 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 433
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 434 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 493
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 494 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 525
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 526 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 562
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 563 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 616
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 617 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 676
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 677 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 723
>gi|432439752|ref|ZP_19682115.1| lon protease [Escherichia coli KTE189]
gi|432444876|ref|ZP_19687185.1| lon protease [Escherichia coli KTE191]
gi|433012613|ref|ZP_20200996.1| lon protease [Escherichia coli KTE104]
gi|433022186|ref|ZP_20210212.1| lon protease [Escherichia coli KTE106]
gi|433324495|ref|ZP_20401782.1| DNA-binding ATP-dependent protease La [Escherichia coli J96]
gi|430969562|gb|ELC86666.1| lon protease [Escherichia coli KTE189]
gi|430976251|gb|ELC93126.1| lon protease [Escherichia coli KTE191]
gi|431535948|gb|ELI12283.1| lon protease [Escherichia coli KTE104]
gi|431541071|gb|ELI16521.1| lon protease [Escherichia coli KTE106]
gi|432347009|gb|ELL41473.1| DNA-binding ATP-dependent protease La [Escherichia coli J96]
Length = 784
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 334/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|126173840|ref|YP_001049989.1| ATP-dependent protease La [Shewanella baltica OS155]
gi|386340600|ref|YP_006036966.1| anti-sigma H sporulation factor LonB [Shewanella baltica OS117]
gi|125997045|gb|ABN61120.1| Lon-A peptidase. Serine peptidase. MEROPS family S16 [Shewanella
baltica OS155]
gi|334863001|gb|AEH13472.1| anti-sigma H sporulation factor, LonB [Shewanella baltica OS117]
Length = 784
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 324/776 (41%), Positives = 472/776 (60%), Gaps = 83/776 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R + + ++ A+ LE +E ++
Sbjct: 72 GTVASILQL---LKLPDGTVK--VLVEGGRRARITRYTQETEFFVAKAEYLESEPLEDKE 126
Query: 109 -------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVA 161
+ Q +I L+++ + +S +++ + LAD A
Sbjct: 127 EVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGIDEAAR----------------LADTMAA 170
Query: 162 SFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLR 221
+ E++ +L+ +++ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L
Sbjct: 171 HMPLKLEDKQSVLEMINVGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYLN 230
Query: 222 QQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS 281
+QM+AI++ELGD D+ D+ AL RK++ A MP+ + EL +L+ M P T
Sbjct: 231 EQMKAIQKELGDLDEGHDEFEALNRKIEEANMPAEAKEKALAELNKLRMMSPMSAEATVV 290
Query: 282 RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGP 341
R Y++ + +PW + S+ I DL A+E LD+DH+GL +VK+RI+EYLAV+ +GP
Sbjct: 291 RSYVDWMTSVPWSQRSK-IKRDLAKAQEVLDTDHFGLEKVKERILEYLAVQSRVRQLKGP 349
Query: 342 VLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 401
+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG++I +
Sbjct: 350 ILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKVIQKM 409
Query: 402 KRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVA 461
+VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FVA
Sbjct: 410 AKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVA 469
Query: 462 TANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVK 521
T+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + ++++GL + +++ ++ +
Sbjct: 470 TSN-SMDIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLLNKQIERNGLKAAEIKVEDSAIV 528
Query: 522 LVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADG 581
+I+ YTREAGVR+LER L+ + R
Sbjct: 529 GIIRYYTREAGVRSLERELSKICRKV---------------------------------- 554
Query: 582 AEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVG 641
+++I + +S V+ V++ L+ LG RF D AE G G
Sbjct: 555 ----VKMILLDKSVKSVT----------VNQENLKSFLGVQRF-DYGKAESKNQIGQVTG 599
Query: 642 LVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGM 701
L WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L + A
Sbjct: 600 LAWTQVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQLGINA---- 655
Query: 702 NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPV 761
+ + RDIH+H P GA PKDGPSAG + TALVS + VR+D AMTGE+TLRG VLP+
Sbjct: 656 DFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRSDVAMTGEITLRGEVLPI 715
Query: 762 GGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GG+K+K+LAAHR GIK V++P+ N +DL E+PA V+A LEI + +++VL+ A E
Sbjct: 716 GGLKEKLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWVDEVLKLALE 771
>gi|407483381|ref|YP_006780530.1| DNA-binding ATP-dependent protease La [Escherichia coli O104:H4
str. 2011C-3493]
gi|417867745|ref|ZP_12512780.1| lon [Escherichia coli O104:H4 str. C227-11]
gi|422991155|ref|ZP_16981926.1| lon protease [Escherichia coli O104:H4 str. C227-11]
gi|422993094|ref|ZP_16983858.1| lon protease [Escherichia coli O104:H4 str. C236-11]
gi|423008409|ref|ZP_16999147.1| lon protease [Escherichia coli O104:H4 str. 11-3677]
gi|423022596|ref|ZP_17013299.1| lon protease [Escherichia coli O104:H4 str. 11-4404]
gi|423027750|ref|ZP_17018443.1| lon protease [Escherichia coli O104:H4 str. 11-4522]
gi|423033587|ref|ZP_17024271.1| lon protease [Escherichia coli O104:H4 str. 11-4623]
gi|423036453|ref|ZP_17027127.1| lon protease [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423041573|ref|ZP_17032240.1| lon protease [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423048259|ref|ZP_17038916.1| lon protease [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423051843|ref|ZP_17040651.1| lon protease [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423058808|ref|ZP_17047604.1| lon protease [Escherichia coli O104:H4 str. 11-4632 C5]
gi|429774732|ref|ZP_19306735.1| lon protease [Escherichia coli O104:H4 str. 11-02030]
gi|429779995|ref|ZP_19311948.1| lon protease [Escherichia coli O104:H4 str. 11-02033-1]
gi|429784047|ref|ZP_19315960.1| lon protease [Escherichia coli O104:H4 str. 11-02092]
gi|429789385|ref|ZP_19321260.1| lon protease [Escherichia coli O104:H4 str. 11-02093]
gi|429795615|ref|ZP_19327441.1| lon protease [Escherichia coli O104:H4 str. 11-02281]
gi|429801541|ref|ZP_19333319.1| lon protease [Escherichia coli O104:H4 str. 11-02318]
gi|429805173|ref|ZP_19336920.1| lon protease [Escherichia coli O104:H4 str. 11-02913]
gi|429809984|ref|ZP_19341686.1| lon protease [Escherichia coli O104:H4 str. 11-03439]
gi|429815744|ref|ZP_19347403.1| lon protease [Escherichia coli O104:H4 str. 11-04080]
gi|429821332|ref|ZP_19352945.1| lon protease [Escherichia coli O104:H4 str. 11-03943]
gi|429917040|ref|ZP_19382980.1| lon protease [Escherichia coli O104:H4 str. Ec11-4984]
gi|429922078|ref|ZP_19387999.1| lon protease [Escherichia coli O104:H4 str. Ec11-5604]
gi|429927896|ref|ZP_19393802.1| lon protease [Escherichia coli O104:H4 str. Ec11-4986]
gi|429931828|ref|ZP_19397723.1| lon protease [Escherichia coli O104:H4 str. Ec11-4987]
gi|429933430|ref|ZP_19399320.1| lon protease [Escherichia coli O104:H4 str. Ec11-4988]
gi|429939084|ref|ZP_19404958.1| lon protease [Escherichia coli O104:H4 str. Ec11-5603]
gi|429946727|ref|ZP_19412582.1| lon protease [Escherichia coli O104:H4 str. Ec11-6006]
gi|341921034|gb|EGT70638.1| lon [Escherichia coli O104:H4 str. C227-11]
gi|354860141|gb|EHF20588.1| lon protease [Escherichia coli O104:H4 str. C227-11]
gi|354866837|gb|EHF27260.1| lon protease [Escherichia coli O104:H4 str. C236-11]
gi|354879480|gb|EHF39818.1| lon protease [Escherichia coli O104:H4 str. 11-4404]
gi|354884067|gb|EHF44381.1| lon protease [Escherichia coli O104:H4 str. 11-3677]
gi|354885868|gb|EHF46160.1| lon protease [Escherichia coli O104:H4 str. 11-4522]
gi|354888935|gb|EHF49189.1| lon protease [Escherichia coli O104:H4 str. 11-4623]
gi|354901536|gb|EHF61663.1| lon protease [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354905767|gb|EHF65850.1| lon protease [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354908274|gb|EHF68330.1| lon protease [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354918746|gb|EHF78702.1| lon protease [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354922434|gb|EHF82349.1| lon protease [Escherichia coli O104:H4 str. 11-4632 C4]
gi|407055678|gb|AFS75729.1| DNA-binding ATP-dependent protease La [Escherichia coli O104:H4
str. 2011C-3493]
gi|429351548|gb|EKY88268.1| lon protease [Escherichia coli O104:H4 str. 11-02030]
gi|429352251|gb|EKY88967.1| lon protease [Escherichia coli O104:H4 str. 11-02033-1]
gi|429353009|gb|EKY89718.1| lon protease [Escherichia coli O104:H4 str. 11-02092]
gi|429366922|gb|EKZ03523.1| lon protease [Escherichia coli O104:H4 str. 11-02093]
gi|429367833|gb|EKZ04425.1| lon protease [Escherichia coli O104:H4 str. 11-02281]
gi|429370328|gb|EKZ06894.1| lon protease [Escherichia coli O104:H4 str. 11-02318]
gi|429382715|gb|EKZ19179.1| lon protease [Escherichia coli O104:H4 str. 11-02913]
gi|429384948|gb|EKZ21402.1| lon protease [Escherichia coli O104:H4 str. 11-03943]
gi|429385471|gb|EKZ21924.1| lon protease [Escherichia coli O104:H4 str. 11-03439]
gi|429397164|gb|EKZ33511.1| lon protease [Escherichia coli O104:H4 str. 11-04080]
gi|429410454|gb|EKZ46676.1| lon protease [Escherichia coli O104:H4 str. Ec11-4984]
gi|429412354|gb|EKZ48551.1| lon protease [Escherichia coli O104:H4 str. Ec11-4986]
gi|429419339|gb|EKZ55477.1| lon protease [Escherichia coli O104:H4 str. Ec11-4987]
gi|429427898|gb|EKZ63978.1| lon protease [Escherichia coli O104:H4 str. Ec11-5603]
gi|429434742|gb|EKZ70766.1| lon protease [Escherichia coli O104:H4 str. Ec11-4988]
gi|429435566|gb|EKZ71584.1| lon protease [Escherichia coli O104:H4 str. Ec11-5604]
gi|429444707|gb|EKZ80652.1| lon protease [Escherichia coli O104:H4 str. Ec11-6006]
Length = 784
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQETLDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|408379476|ref|ZP_11177070.1| ATP-dependent protease La [Agrobacterium albertimagni AOL15]
gi|407746960|gb|EKF58482.1| ATP-dependent protease La [Agrobacterium albertimagni AOL15]
Length = 805
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 321/795 (40%), Positives = 459/795 (57%), Gaps = 87/795 (10%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q+ ASD + I+ G A L L ++ P G V V++EG R V+ + R
Sbjct: 57 QINASDDDPAPDAIY--EVGTVANVLQL---LKLPDGTVK--VLIEGRARAKVESYTGRE 109
Query: 90 TYYTARIS--------SLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGG 141
YY A+ S ++E+ + V + +++ L+++ + S +E
Sbjct: 110 DYYEAKASILAEPAEDAVEIEALSRSVVSEFENYVKLNKKISPEVVGAASQIED------ 163
Query: 142 RTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAE 201
KLAD + I E+ ML++V +K RL KA ++ + ++V +
Sbjct: 164 ----------YSKLADTVASHLSIKITEKQEMLETVSVKTRLEKALGFMEGEISVLQVEK 213
Query: 202 KITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHV 261
+I +V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D++ LE ++ + +
Sbjct: 214 RIRSRVKRQMEKTQREYYLNEQMKAIQKELGDGEDGRDEMAELEERIAKTKLSKEAKEKA 273
Query: 262 QKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRV 321
EL++L+ M P T R YL+ + LPW K S+ + +DL AA++ LD DH+GL +V
Sbjct: 274 DAELKKLRHMSPMSAEATVVRNYLDWLLGLPWGKKSK-VKIDLNAAEKVLDEDHFGLDKV 332
Query: 322 KQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEAD 381
K+RI+EYLAV+ +GP+LC VGPPGVGKTSLA SIA A GR+++R++LGGV+DEA+
Sbjct: 333 KERIVEYLAVQARATKLKGPILCLVGPPGVGKTSLAKSIAKATGREYVRMALGGVRDEAE 392
Query: 382 IRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK 441
IRGHRRTYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN
Sbjct: 393 IRGHRRTYIGSMPGKIVQSMKKAKKSNPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNS 452
Query: 442 TFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPR 501
TF DHYL V +DLS V+FV TAN IP PL+DRME+I + GYT +EKL IA RHL+P+
Sbjct: 453 TFMDHYLEVEYDLSNVMFVTTANTLN-IPGPLMDRMEIIRIAGYTEDEKLEIAKRHLLPK 511
Query: 502 VLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALP 561
+ +H L E + ++ + +IQ+YTREAGVR+ ER L LAR A ++ +
Sbjct: 512 AIKEHALRPEEFSVADSAILAIIQQYTREAGVRSFERELMKLARKAVTEIIKG------- 564
Query: 562 SSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGP 621
++TS V E + E LG
Sbjct: 565 -----------------------------------------KVTSVAVTGENINE-YLGV 582
Query: 622 PRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
PRF EA E G+ GL WT GGE+ +E M GKG + +TG L +V+KES
Sbjct: 583 PRFRHGEA-EGEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLKEVMKESISA 641
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA D + DIH+H P GA PKDGPSAG+ + TA+VS+ +
Sbjct: 642 AASYVRSRAVDFGVEPPR----FDKSDIHVHVPEGATPKDGPSAGIAMATAIVSIMTGIP 697
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
V D AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL ++P V ++E
Sbjct: 698 VSKDIAMTGEVTLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPDNVKNNME 757
Query: 802 IILAKRMEDVLEQAF 816
I+ RM +V+ A
Sbjct: 758 IVPVSRMGEVIRHAL 772
>gi|337288344|ref|YP_004627816.1| anti-sigma H sporulation factor, LonB [Thermodesulfobacterium sp.
OPB45]
gi|334902082|gb|AEH22888.1| anti-sigma H sporulation factor, LonB [Thermodesulfobacterium
geofontis OPF15]
Length = 807
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 314/753 (41%), Positives = 463/753 (61%), Gaps = 63/753 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G T +++EGL R + + Y+ + +++ E +E D + IAL + K
Sbjct: 82 PDG--TLKILVEGLNRGRIVRFLSDSEYFLVEV------ELKTEIIEADVETIALIKLCK 133
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ E K+ LL + +D A + E++ +L+++ +K RL
Sbjct: 134 ESLEEYSHY--NKKLNPEIVNNLLNIDNPSEFSDRLAAILNLKLEQKQKLLETISVKKRL 191
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
+ ++ I+ +I ++V+ Q+ K+Q+++ L +QM+AI++ELG+ +D DL
Sbjct: 192 EILLNHLRGEIEIIKTESRIRERVKKQMEKTQRDYYLHEQMKAIQKELGEREDGRSDLAE 251
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
LE++++ +P + V++E ++L M P T R Y++ + LPW + +++ ++D
Sbjct: 252 LEKRIKKKKLPKEVASIVRREFKKLSLMSPMSAEATVVRNYIDWLISLPWYEKTQD-NID 310
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
++ +E L+ +HYGL + KQRIIE+LAV+KL +GP+LCFVGPPGVGKTSLA SIA A
Sbjct: 311 IEKVEELLNKNHYGLEKPKQRIIEHLAVQKLTKSIKGPILCFVGPPGVGKTSLAKSIAEA 370
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
+GRKF+R+SLGG++DEA+IRGHRRTY+G++PG++I G+++ G NPV LDE+DK G D
Sbjct: 371 IGRKFVRVSLGGIRDEAEIRGHRRTYVGALPGKIIQGMRKAGTINPVFCLDEVDKIGMDF 430
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDPA+ALLEVLDPEQN +F DHYL V +DLSKV+F+ TAN IPP LLDRMEVIELP
Sbjct: 431 RGDPAAALLEVLDPEQNHSFQDHYLEVGYDLSKVLFITTANALYTIPPALLDRMEVIELP 490
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EEKL IA +L+PR L HGL E + + + + +I++YTREAGVRNLER +A +
Sbjct: 491 GYTEEEKLEIAKNYLLPRQLQAHGLSPEMVPLDDDALLEIIRKYTREAGVRNLEREIATI 550
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A VA+ + E IP F+
Sbjct: 551 CRKIAKDVAKNPK------------------------------EFIP-----------FK 569
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
IT + LE+ LG P++ AE GI+ GL WT GG + +EA M GKG
Sbjct: 570 ITI------SKLEEFLGVPKY-RYGVAEEQPQVGIATGLAWTETGGALLQIEAVIMPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
L +TG+LG+V++ES Q A+++VR+RA L L ++ + DIH+H P GA+PKDGP
Sbjct: 623 NLQITGKLGEVMQESVQAAMSYVRSRALQLGL----PLDFYRKIDIHVHVPEGAIPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TA+VS + V+ AMTGE+TLRG +LP+GG+K+K+LAA R GIK V++P+
Sbjct: 679 SAGITIATAIVSALLKIPVKNTVAMTGEITLRGRILPIGGLKEKLLAAVRGGIKTVLIPK 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N K+L E+ VL LE+IL + M++VL+ A
Sbjct: 739 ENEKELKEINPNVLRDLEVILVENMDEVLKIAL 771
>gi|153000124|ref|YP_001365805.1| ATP-dependent protease La [Shewanella baltica OS185]
gi|160874746|ref|YP_001554062.1| ATP-dependent protease La [Shewanella baltica OS195]
gi|378707999|ref|YP_005272893.1| ATP-dependent protease La [Shewanella baltica OS678]
gi|418023627|ref|ZP_12662612.1| anti-sigma H sporulation factor, LonB [Shewanella baltica OS625]
gi|151364742|gb|ABS07742.1| ATP-dependent protease La [Shewanella baltica OS185]
gi|160860268|gb|ABX48802.1| ATP-dependent protease La [Shewanella baltica OS195]
gi|315266988|gb|ADT93841.1| ATP-dependent protease La [Shewanella baltica OS678]
gi|353537510|gb|EHC07067.1| anti-sigma H sporulation factor, LonB [Shewanella baltica OS625]
Length = 785
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 325/777 (41%), Positives = 472/777 (60%), Gaps = 84/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R + + ++ A+ LE +E ++
Sbjct: 72 GTVASILQL---LKLPDGTVK--VLVEGGRRARITRYTQETEFFVAKAEYLESEPLEDKE 126
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q +I L+++ + +S +++ + LAD
Sbjct: 127 EEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGIDEAAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +++ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKLEDKQSVLEMINVGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ D+ AL RK++ A MP+ + EL +L+ M P T
Sbjct: 231 NEQMKAIQKELGDLDEGHDEFEALNRKIEEANMPAEAKEKALAELNKLRMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW + S+ I DL A+E LD+DH+GL +VK+RI+EYLAV+ +G
Sbjct: 291 VRSYVDWMTSVPWSQRSK-IKRDLAKAQEVLDTDHFGLEKVKERILEYLAVQSRVRQLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKVIQK 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + ++++GL + +++ ++ +
Sbjct: 470 ATSN-SMDIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLLNKQIERNGLKAAEIKVEDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR+LER L+ + R
Sbjct: 529 VGIIRYYTREAGVRSLERELSKICRKV--------------------------------- 555
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+++I + +S V+ V++ L+ LG RF D AE G
Sbjct: 556 -----VKMILLDKSVKSVT----------VNQDNLKSFLGVQRF-DYGKAESKNQIGQVT 599
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L + A
Sbjct: 600 GLAWTQVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQLGINA--- 656
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + RDIH+H P GA PKDGPSAG + TALVS + VR+D AMTGE+TLRG VLP
Sbjct: 657 -DFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRSDVAMTGEITLRGEVLP 715
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK V++P+ N +DL E+PA V+A LEI + +++VL+ A E
Sbjct: 716 IGGLKEKLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWVDEVLKLALE 772
>gi|417139420|ref|ZP_11982842.1| endopeptidase La [Escherichia coli 97.0259]
gi|386157148|gb|EIH13490.1| endopeptidase La [Escherichia coli 97.0259]
Length = 784
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/765 (43%), Positives = 461/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGI----NTDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|170025449|ref|YP_001721954.1| DNA-binding ATP-dependent protease La [Yersinia pseudotuberculosis
YPIII]
gi|169751983|gb|ACA69501.1| ATP-dependent protease La [Yersinia pseudotuberculosis YPIII]
Length = 784
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/766 (43%), Positives = 460/766 (60%), Gaps = 89/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEME-----QVEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE M E E + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPVMDDREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLASLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DTPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIMSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R AVK N L D +E+ G++
Sbjct: 544 LEREISKLCRK-AVK-------------------------NLLMDKTVKHIEI--NGDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L+ LG + D A RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
HR GIK V++P+ N +DL E+P V+A LEI KR++DVL A E
Sbjct: 727 HRGGIKVVLIPDDNKRDLEEIPGNVIADLEIHPVKRIDDVLAIALE 772
>gi|294635326|ref|ZP_06713823.1| ATP-dependent protease La [Edwardsiella tarda ATCC 23685]
gi|291091302|gb|EFE23863.1| ATP-dependent protease La [Edwardsiella tarda ATCC 23685]
Length = 801
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 324/766 (42%), Positives = 462/766 (60%), Gaps = 85/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR---ISSLEMTKIEME-----QVEQDPDF 115
P G V V++EG+ R + LS G ++ A+ +++ EM + E E + Q +
Sbjct: 101 PDGTVK--VLVEGIQRARITTLSDGGEHFAAQAEYLATPEMDEREQEVLVRTAINQFEGY 158
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 159 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLNDKQTVLE 202
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 203 MFDVAERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 262
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + EL++LK M P T R Y++ I +PW
Sbjct: 263 DTPDEFEALKRKIEAAKMPKEAREKAEAELQKLKMMSPMSAEATVVRGYIDWIVQVPWH- 321
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 322 ARSKVKKDLRKAQETLDADHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 381
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 382 LGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVRNPLFLLDE 441
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 442 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 500
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 501 RMEVIRLSGYTEDEKLNIARQHLLPKQIERNALKKGELTVDDSAIVGIIRYYTREAGVRA 560
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 561 LEREISKLCRKAVKQL---------------------LLDKSLRH--------------- 584
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG RFD ++ RV G GL WT GG++
Sbjct: 585 ------------IEINGDNLKDYLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 629
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E ++ GKG+L TG LG+V++ES Q ALT VRARA L + + + RDIH+H
Sbjct: 630 IETASVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGI----NQDFYEKRDIHVHV 685
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 686 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 745
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
GIK V++P+ N +DL E+P VL L+I KR+++VL A +
Sbjct: 746 GGIKTVLIPDDNKRDLEEMPENVLRDLDIHPVKRIDEVLTLALQNA 791
>gi|452124887|ref|ZP_21937471.1| ATP-dependent protease La [Bordetella holmesii F627]
gi|452128293|ref|ZP_21940870.1| ATP-dependent protease La [Bordetella holmesii H558]
gi|451924117|gb|EMD74258.1| ATP-dependent protease La [Bordetella holmesii F627]
gi|451925340|gb|EMD75478.1| ATP-dependent protease La [Bordetella holmesii H558]
Length = 779
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 320/748 (42%), Positives = 447/748 (59%), Gaps = 70/748 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
++++G RF V E + AR++ +E + QVE A Q K A+E I+
Sbjct: 91 LLVQGQSRFRVLEFLEGWPFMVARVALVEEATADNSQVE------ARFLQLKQQALEAIT 144
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
+L G +E+ + LAD+ ++ E+ +L++ DL RL K L+
Sbjct: 145 LLPNVPDELGGVVQGIESPTL--LADMVTNLVDVKPAEKQAVLETFDLAQRLDKVIGLLA 202
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
++ +R++++I ++ Q + Q+E LLR+Q+R I++ELGD +D +L L+ +++A
Sbjct: 203 ARIEVLRLSKEIGERTRAQFDERQRETLLREQLRQIQKELGDTEDTAAELEQLKTAIEAA 262
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMP ++ +H +KE RL++M R YLE + +LPW++ ++ +DL A++ L
Sbjct: 263 GMPQDVLRHARKEFGRLQRMGEASGENAMLRTYLEWLTELPWKQEPQQ-PIDLNDARKIL 321
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
D DH+GL ++K+RI+EYLAVRKL PD R P+LCF GPPGVGKTSL SIA A R F R+
Sbjct: 322 DDDHFGLDKIKRRILEYLAVRKLNPDGRSPILCFAGPPGVGKTSLGQSIARATDRAFQRV 381
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGS-DVRGDPASA 430
+LGGV DEA+IRGHRRTY+G++PG +I ++R G N V++LDEIDK G+ GDP SA
Sbjct: 382 ALGGVHDEAEIRGHRRTYLGALPGNIIQAMRRAGTNNVVLMLDEIDKLGAGGFHGDPGSA 441
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
LLEVLDPEQN F D+YL V FDLS V+F+ TAN IP PL DRME+I+LPGYT EEK
Sbjct: 442 LLEVLDPEQNHKFRDNYLGVDFDLSHVMFICTANALDTIPGPLRDRMEIIQLPGYTAEEK 501
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
++IA R+L+ L +GL + I +A + ++ YTREAGVRNLER + + R AA++
Sbjct: 502 VQIARRYLVEGQLQANGLQPAQVDISDAALTEIVSNYTREAGVRNLEREIGSTLRHAAMQ 561
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
+AE + E + D
Sbjct: 562 IAEGKAEHVSIGTSD--------------------------------------------- 576
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
L +LGP RF++ E A R + G++ GL WT GG++ F+EA+ + G G L LTGQ
Sbjct: 577 ----LPAILGPQRFEN-EVALRTSVAGVATGLAWTPVGGDILFIEASKVPGSGRLILTGQ 631
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KESAQ ALT + + + L DIHIH PAGA PKDGPSAGV +
Sbjct: 632 LGDVMKESAQTALTLAKTWSGE----------SLDKFDIHIHVPAGATPKDGPSAGVAMF 681
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
AL SL S K + A+ AMTGE++LRGLVLP+GGVK+K LAA R GIK V+LP RN +DL
Sbjct: 682 VALASLLSDKPISAEVAMTGEVSLRGLVLPIGGVKEKTLAALRAGIKVVMLPRRNERDLE 741
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFEG 818
+VP L +L R+ED L+ A EG
Sbjct: 742 DVPPEARRKLRFVLLDRVEDALKCAIEG 769
>gi|15837791|ref|NP_298479.1| ATP-dependent serine proteinase La [Xylella fastidiosa 9a5c]
gi|9106159|gb|AAF83999.1|AE003953_3 ATP-dependent serine proteinase La [Xylella fastidiosa 9a5c]
Length = 848
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/780 (42%), Positives = 473/780 (60%), Gaps = 67/780 (8%)
Query: 43 IHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT 102
+ H G A+ L L ++ P G T V++EGL R SV ++ +L
Sbjct: 91 VDLHTIGTYAQVLQL---LKLPDG--TIKVLVEGLTRVSVDQVVEHD-------GALRGC 138
Query: 103 KIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLAD 157
IE+ ++ R+ +A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 139 GIEIASTQE-----REEREIEAIVRSLLSLFEQYVKTNRKLPPELLQTLSGIDDPGRLAD 193
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
A + + +L+++++ RL LVD + ++ ++I +V+ Q+ KSQ+E
Sbjct: 194 TIAAHLSVRLAYKQRLLETIEIGDRLEILIGLVDGEIDVQQMEKRIRGRVKSQMEKSQRE 253
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELGD DD +L L RK+ GMP + + EL +LK+M P
Sbjct: 254 YYLNEQMKAIQKELGDFDDLPSELEELARKIAEIGMPKLVQSKAKSELNKLKQMSPMSAE 313
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + +PW+K ++ + DLK A+ LD DHYGL +VK+RI+EYLAV+
Sbjct: 314 AAVVRNYLDWLLGVPWKKCTK-VRKDLKVAQSTLDDDHYGLDKVKERILEYLAVQSRVKQ 372
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
RGP+LC VGPPGVGKTSL SIA A RKF+R+SLGGV+DEA++RGHRRTY+GSMPGR+
Sbjct: 373 MRGPILCLVGPPGVGKTSLGQSIAKATNRKFVRMSLGGVRDEAEVRGHRRTYVGSMPGRV 432
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+ L +VG NP+ +LDEIDK D RGDP++ALLEVLDPEQN FNDHYL+V DLS+V
Sbjct: 433 VQNLNKVGSKNPLFVLDEIDKMAMDFRGDPSAALLEVLDPEQNNAFNDHYLDVDLDLSEV 492
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E L I E
Sbjct: 493 MFVATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIRANGLAVEELAIGE 551
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
++ +++ YTRE+GVRNLER ++ + R K++ +G
Sbjct: 552 DAIRDIVRYYTRESGVRNLEREISKICRKIV---------------KEIALVG------- 589
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
V P+ + + + F +TS LEK LG RFD AE G
Sbjct: 590 ----------VKPVAKKSTKSKVLFAVTS------KNLEKYLGVRRFDFGR-AEEANEIG 632
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+ GL WT GG++ +E+T + GKG L LTGQLG+V+KESA ALT VR+RA +
Sbjct: 633 LVTGLAWTEVGGDLLQIESTLVPGKGNLILTGQLGNVMKESASAALTVVRSRADRFCI-- 690
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
++ L +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ VRAD AMTGE+TLRG
Sbjct: 691 --DVDFLHNQDVHLHVPDGATPKDGPSAGIAMVTSLVSMLTKVPVRADVAMTGEITLRGR 748
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
V +GG+K+K+LAA R GI+ V++PE N +DL ++PA V +L I+ K +++VL+ A E
Sbjct: 749 VSVIGGLKEKLLAALRGGIRTVLIPEGNRRDLADIPANVTRALTIVPVKWIDEVLDLALE 808
>gi|372276434|ref|ZP_09512470.1| DNA-binding ATP-dependent protease La [Pantoea sp. SL1_M5]
Length = 784
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 327/771 (42%), Positives = 462/771 (59%), Gaps = 90/771 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + L+ G ++ A+ L +IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRAHITTLADNGDHFVAQAEYLVSPEIEEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNNIDDAAR----------------LADTVAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYEALKRKIDAAKMPEEAREKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRKAQETLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+ + ++++ L + + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLTKQIERNALKANEITVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A + S L+D
Sbjct: 544 LERELSKLCRKA---------------------VKSLLMD-------------------- 562
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
+ + ++ L+ LG RFD ++ RV G GL WT GG++
Sbjct: 563 -------KTKKHITINGENLKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
HR GIK V++P+ N +DL E+P V+A LEI KR+E+VL A E P+
Sbjct: 727 HRGGIKTVLIPDDNKRDLEEIPQNVIADLEIHPVKRIEEVLNLALE-NAPY 776
>gi|345298114|ref|YP_004827472.1| anti-sigma H sporulation factor LonB [Enterobacter asburiae LF7a]
gi|345092051|gb|AEN63687.1| anti-sigma H sporulation factor, LonB [Enterobacter asburiae LF7a]
Length = 784
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ ++ E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGEHFSAKAEYLDSPQLDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+ + ++++ L + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLSKQIERNALKDSEITVDDSAIISIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKTL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
HE LG RFD ++ RV G GL WT GG++
Sbjct: 576 HE--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPHENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|325274291|ref|ZP_08140402.1| ATP-dependent protease La [Pseudomonas sp. TJI-51]
gi|324100574|gb|EGB98309.1| ATP-dependent protease La [Pseudomonas sp. TJI-51]
Length = 798
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 329/774 (42%), Positives = 466/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ + + A +S ++ T
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGAVERFTEVEGHIRAEVSLIDETD----- 117
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
+ R+ + L+S EQ + G + +VL I +L D A
Sbjct: 118 --------SAERESEVFVRTLLSQFEQYVQLGKKVPAEVLSSLNSIEEPGRLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQEILEIVDLTARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+P + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDGDEGHNEVEELKKRIEAAGLPKDALTKAQAELNKLKQMSPMSAEATVVRS 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +PW KA ++ LDL A+E LD+DHYGL VK+RI+EYLAV+K RGPVL
Sbjct: 290 YLDWLVQVPW-KAQSKVRLDLAKAEEILDADHYGLEEVKERILEYLAVQKRVKKIRGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIATATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTS 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IPP LLDRME+I LPGYT +EK+ IA+++L+P+ + +GL + L++ + ++ +
Sbjct: 469 N-SMNIPPALLDRMEIIRLPGYTEDEKINIAIKYLVPKQVKANGLKKDELEVDVSAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR LER +A + R + Q+Q + +S+
Sbjct: 528 IRFYTREAGVRGLERQIAKVCRKVVKEHTGQKQVKVKVASEQ------------------ 569
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
LE +LG +F AE+ G GL
Sbjct: 570 -------------------------------LEHLLGVRKF-RYGLAEQQDQIGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 598 WTQVGGELLTIEAVVIPGKGQLIKTGSLGDVMVESITAAQTVVRSRAHSLGIAA----GF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ D+HIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKHDVHIHMPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|423096200|ref|ZP_17083996.1| ATP-dependent protease La [Pseudomonas fluorescens Q2-87]
gi|397885201|gb|EJL01684.1| ATP-dependent protease La [Pseudomonas fluorescens Q2-87]
Length = 798
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 335/759 (44%), Positives = 461/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S +E + A +R+ +
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLIE-------------EVDAPARESE 124
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ VD
Sbjct: 125 VFVRSLLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIVD 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD D+
Sbjct: 185 LSARVEHVLALLDGEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEIEELKKRIDAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ E ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGELEFDEEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A +E A L+ R A
Sbjct: 543 QIAKVCRKAV-------KEHA--------------LEKRFA------------------- 562
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
++TS L LE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 563 ---VKVTSDL------LEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRARSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKI 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|22124936|ref|NP_668359.1| DNA-binding ATP-dependent protease La [Yersinia pestis KIM10+]
gi|45440625|ref|NP_992164.1| DNA-binding ATP-dependent protease La [Yersinia pestis biovar
Microtus str. 91001]
gi|108808641|ref|YP_652557.1| DNA-binding ATP-dependent protease La [Yersinia pestis Antiqua]
gi|108811100|ref|YP_646867.1| DNA-binding ATP-dependent protease La [Yersinia pestis Nepal516]
gi|145600050|ref|YP_001164126.1| DNA-binding ATP-dependent protease La [Yersinia pestis Pestoides F]
gi|21957775|gb|AAM84610.1|AE013706_5 DNA-binding ATP-dependent protease La; heat shock K-protein
[Yersinia pestis KIM10+]
gi|45435482|gb|AAS61041.1| ATP-dependent protease La [Yersinia pestis biovar Microtus str.
91001]
gi|108774748|gb|ABG17267.1| Lon-A peptidase. Serine peptidase. MEROPS family S16 [Yersinia
pestis Nepal516]
gi|108780554|gb|ABG14612.1| Lon-A peptidase. Serine peptidase. MEROPS family S16 [Yersinia
pestis Antiqua]
gi|145211746|gb|ABP41153.1| ATP-dependent protease La [Yersinia pestis Pestoides F]
Length = 802
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/766 (43%), Positives = 460/766 (60%), Gaps = 89/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEME-----QVEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE M E E + Q +
Sbjct: 102 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPVMDDREQEVLVRTAINQFEGY 159
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 160 IKLNKKIPPEVLASLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 203
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 204 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 263
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 264 DTPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNS 323
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 324 RSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 382
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 383 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 442
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 443 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 501
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 502 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIMSIIRYYTREAGVRS 561
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R AVK N L D +E+ G++
Sbjct: 562 LEREISKLCRK-AVK-------------------------NLLMDKTVKHIEI--NGDN- 592
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L+ LG + D A RV G GL WT GG++
Sbjct: 593 -------------------LKDFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 630
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 631 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 684
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 685 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 744
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
HR GIK V++P+ N +DL E+P V+A LEI KR++DVL A E
Sbjct: 745 HRGGIKVVLIPDDNKRDLEEIPDNVIADLEIHPVKRIDDVLAIALE 790
>gi|409098060|ref|ZP_11218084.1| ATP-dependent protease La [Pedobacter agri PB92]
Length = 823
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 317/772 (41%), Positives = 464/772 (60%), Gaps = 76/772 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A + L ++ P G T V+++G RFS+ E Y A + K E ++
Sbjct: 104 GTVANIIKL---LQMPDGNTT--VIIQGKQRFSLIEEVQNEPYIKAVVK-----KFEEQK 153
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS---FEI 165
+ D +F L + + ++I + + L+ + + F++S E+
Sbjct: 154 HKADKEFKTLIASIREMSAQIIQL---SPNIPSEASIALKNIESNSFLINFISSNMNAEM 210
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
+ +++++ +D L+ R K EL+ LQ + + +I KV L K Q+++ L QQ++
Sbjct: 211 ADKQKILEMDK--LQERAQKVMELLMVELQMLELRNQIQSKVRTDLDKQQRDYFLNQQLK 268
Query: 226 AIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYL 285
I+EELG N D + AL+ K + ++ H KEL +L +M P P Y+ YL
Sbjct: 269 TIQEELGGNSADLE-FDALQEKAKKKKWSQSVADHFDKELDKLGRMNPAAPDYSVQLNYL 327
Query: 286 ELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCF 345
EL+ DLPW + +++ + DLK A+ LD DH+GL +VKQRI+EYLAV KLK D + P+LC
Sbjct: 328 ELLLDLPWSEFTKD-NFDLKRAQRILDKDHFGLEKVKQRIVEYLAVLKLKRDMKAPILCL 386
Query: 346 VGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVG 405
VGPPGVGKTSL SIA ALGRK++R++LGG++DEA+IRGHR+TYIG+MPGR+I +K+ G
Sbjct: 387 VGPPGVGKTSLGKSIAKALGRKYVRMALGGIRDEAEIRGHRKTYIGAMPGRIISSIKKAG 446
Query: 406 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 465
NPV +LDEIDK G+D RGDP+SALLEVLDPEQN F DHY+ V +DLS ++F+ATAN
Sbjct: 447 ADNPVFVLDEIDKVGTDHRGDPSSALLEVLDPEQNNAFYDHYVEVDYDLSNILFIATANS 506
Query: 466 AQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQ 525
I P LLDRME+IE+ GYT EEK+ IA ++L+P+ + HGL ++ + + A+++ VI+
Sbjct: 507 LSTIQPALLDRMEIIEVNGYTIEEKIEIAKKYLLPKQKENHGLQNKDINLKPALIEKVIE 566
Query: 526 RYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEV 584
YTRE+GVR LE+ + +L R A K+A +E+ +++D+ R LG+P+ D L +G EV
Sbjct: 567 DYTRESGVRGLEKKIGSLVRGVATKLAMEEEYNVTLANEDIERILGAPIYDKDLYEGNEV 626
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
G+ GL W
Sbjct: 627 ---------------------------------------------------AGVVTGLAW 635
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T+ GG++ F+E++ GKG+L LTG LGDV+KESA IAL ++RA A + + L
Sbjct: 636 TSVGGDILFIESSLSPGKGKLTLTGNLGDVMKESAVIALAYLRAHAAEFGI----DYTLF 691
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
D+H+H PAGA PKDGPSAGVT++TAL S F++++V+ + AMTGE+TLRG VLPVGG+
Sbjct: 692 DNWDVHVHVPAGATPKDGPSAGVTMLTALTSAFTQRKVKQNLAMTGEITLRGKVLPVGGI 751
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K+KILAA R IK +IL + N KD++E+ + + L M +V+E A
Sbjct: 752 KEKILAAKRANIKEIILCKSNRKDILEIKESYIKDLTFHYVTEMSEVIELAL 803
>gi|417331699|ref|ZP_12115854.1| ATP-dependent protease La Type I [Salmonella enterica subsp.
enterica serovar Alachua str. R6-377]
gi|353584542|gb|EHC44623.1| ATP-dependent protease La Type I [Salmonella enterica subsp.
enterica serovar Alachua str. R6-377]
Length = 741
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 41 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 98
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 99 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 142
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 143 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 202
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 203 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 261
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 262 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 321
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 322 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 381
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 382 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 440
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 441 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 500
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 501 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 532
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 533 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 569
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 570 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 623
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 624 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 683
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 684 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 730
>gi|409202137|ref|ZP_11230340.1| DNA-binding ATP-dependent protease La [Pseudoalteromonas
flavipulchra JG1]
Length = 785
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 330/781 (42%), Positives = 461/781 (59%), Gaps = 88/781 (11%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI- 104
+ G A L L ++ P G V V++EG R + E Y+ A+ + +
Sbjct: 69 YQTGTIATVLQL---LKLPDGTVK--VLVEGTQRAKIDEFLITDEYFLAQAQYIPSHDVD 123
Query: 105 EMEQ-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
E EQ + Q ++ L+++ + +S +++ + LAD
Sbjct: 124 EQEQDILVRSAISQFEGYVKLNKKIPPEVLTSVSGIDEAAR----------------LAD 167
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
A I E+ +L+ D+ RL L++ + ++V +KI +V+ Q+ KSQ+E
Sbjct: 168 TMAAHMPIKVPEKQKVLEINDVTERLEYLMALMEGEIDLLQVEKKIRSRVKKQMEKSQRE 227
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELG+ DD D+ AL++++ A MP + EL +LK M P
Sbjct: 228 YYLNEQMKAIQKELGELDDVPDEFEALKKRISEANMPQEAEEKALSELNKLKMMSPMSAE 287
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
T R Y+E + ++PW+K S+ + DL A++ LD+DHYGL +VK RIIEYLAV++
Sbjct: 288 ATVVRSYIETMINVPWKKRSK-VKKDLAGAQKILDADHYGLEKVKDRIIEYLAVQQRTNK 346
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC VGPPGVGKTSL SIA + GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+L
Sbjct: 347 LKGPILCLVGPPGVGKTSLGQSIARSTGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKL 406
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
I + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN F DHYL V +DLS V
Sbjct: 407 IQSMSKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSNFADHYLEVDYDLSDV 466
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N IP PLLDRMEVI L GYT +EKL IA +HLIP+ + ++GL + I +
Sbjct: 467 MFVATSNSFN-IPGPLLDRMEVIRLSGYTEDEKLNIAKQHLIPKQVKRNGLKESEINIED 525
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+ + +I+ YTREAGVRNLER ++ L R A + LLD
Sbjct: 526 SAIIGIIRYYTREAGVRNLEREISKLCRKAVKNI---------------------LLDKN 564
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAA 635
+ +V+++ LE LG R D E +RV
Sbjct: 565 VKQ---------------------------VVINQENLEDFLGVQRHDYGKAEDGDRV-- 595
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
G GL WT GG++ +E A+ GKG+L TG LGDV++ES Q A+T VR RA L++
Sbjct: 596 -GQVTGLAWTEVGGDLLTIECAAVPGKGKLAYTGSLGDVMQESIQAAMTVVRNRADKLRI 654
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
+ + RDIH+H P GA PKDGPSAG+ +VT LVS + VRAD AMTGE+TLR
Sbjct: 655 ----NDDFYEKRDIHVHVPEGATPKDGPSAGIAMVTGLVSSLTGNPVRADVAMTGEITLR 710
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
G VLP+GG+K+K+LAAHR GIKRV++P++N +DL E+P VL L+I +++VL A
Sbjct: 711 GEVLPIGGLKEKLLAAHRGGIKRVLIPKKNERDLKEIPENVLEGLDIHAVSWIDEVLSLA 770
Query: 816 F 816
Sbjct: 771 L 771
>gi|417826441|ref|ZP_12473019.1| ATP-dependent protease La [Shigella flexneri J1713]
gi|335577006|gb|EGM63239.1| ATP-dependent protease La [Shigella flexneri J1713]
Length = 784
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/765 (43%), Positives = 461/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
H+ LG RF D A+ G GL WT GG++ +E
Sbjct: 576 HD--------------------YLGVQRF-DYGCADNENRVGQVTGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHF 713
+ GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H
Sbjct: 615 TACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|82542927|ref|YP_406874.1| DNA-binding ATP-dependent protease La [Shigella boydii Sb227]
gi|187730322|ref|YP_001879150.1| DNA-binding ATP-dependent protease La [Shigella boydii CDC 3083-94]
gi|417680658|ref|ZP_12330043.1| ATP-dependent protease La [Shigella boydii 3594-74]
gi|420324046|ref|ZP_14825832.1| ATP-dependent protease La [Shigella flexneri CCH060]
gi|420351208|ref|ZP_14852407.1| ATP-dependent protease La [Shigella boydii 4444-74]
gi|420378628|ref|ZP_14878127.1| ATP-dependent protease La [Shigella dysenteriae 225-75]
gi|421681142|ref|ZP_16120972.1| ATP-dependent protease La [Shigella flexneri 1485-80]
gi|81244338|gb|ABB65046.1| DNA-binding, ATP-dependent protease La [Shigella boydii Sb227]
gi|187427314|gb|ACD06588.1| ATP-dependent protease La [Shigella boydii CDC 3083-94]
gi|332098616|gb|EGJ03582.1| ATP-dependent protease La [Shigella boydii 3594-74]
gi|391256936|gb|EIQ16058.1| ATP-dependent protease La [Shigella flexneri CCH060]
gi|391289063|gb|EIQ47559.1| ATP-dependent protease La [Shigella boydii 4444-74]
gi|391306861|gb|EIQ64609.1| ATP-dependent protease La [Shigella dysenteriae 225-75]
gi|404341890|gb|EJZ68292.1| ATP-dependent protease La [Shigella flexneri 1485-80]
Length = 784
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/765 (43%), Positives = 461/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
H+ LG RF D A+ G GL WT GG++ +E
Sbjct: 576 HD--------------------YLGVQRF-DYGRADNENCVGQVTGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHF 713
+ GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H
Sbjct: 615 TACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|304395501|ref|ZP_07377384.1| ATP-dependent protease La [Pantoea sp. aB]
gi|308185910|ref|YP_003930041.1| ATP-dependent protease La [Pantoea vagans C9-1]
gi|440758260|ref|ZP_20937431.1| ATP-dependent protease La [Pantoea agglomerans 299R]
gi|304356795|gb|EFM21159.1| ATP-dependent protease La [Pantoea sp. aB]
gi|308056420|gb|ADO08592.1| ATP-dependent protease La [Pantoea vagans C9-1]
gi|436428044|gb|ELP25710.1| ATP-dependent protease La [Pantoea agglomerans 299R]
Length = 784
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 327/771 (42%), Positives = 462/771 (59%), Gaps = 90/771 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + L+ G ++ A+ L +IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRAHITTLADNGDHFVAQAEYLVSPEIEEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNNIDDAAR----------------LADTVAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYEALKRKIDAAKMPEEAREKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRKAQETLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+ + ++++ L + + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLTKQIERNALKASEITVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A + S L+D
Sbjct: 544 LERELSKLCRKA---------------------VKSLLMD-------------------- 562
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
+ + ++ L+ LG RFD ++ RV G GL WT GG++
Sbjct: 563 -------KTKKHITINGENLKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
HR GIK V++P+ N +DL E+P V+A LEI KR+E+VL A E P+
Sbjct: 727 HRGGIKTVLIPDDNKRDLEEIPQNVIADLEIHPVKRIEEVLNLALE-NAPY 776
>gi|238783607|ref|ZP_04627628.1| ATP-dependent protease La [Yersinia bercovieri ATCC 43970]
gi|238715485|gb|EEQ07476.1| ATP-dependent protease La [Yersinia bercovieri ATCC 43970]
Length = 784
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 459/767 (59%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEME-----QVEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE M E E + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPVMDDREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLASLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDVTERLEYLMAMMESEIDLLQVEKRIRNRVKRQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DTPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIMSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + N L D +E+ G++
Sbjct: 544 LEREISKLCRKA--------------------------VKNLLMDKTVKHIEIT--GDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L+ LG + D A RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++PE N +DL E+P V+A LEI KR++DVL A +
Sbjct: 727 HRGGIKVVLIPEENKRDLEEIPDNVIADLEIHPVKRIDDVLAIALQN 773
>gi|51595311|ref|YP_069502.1| DNA-binding ATP-dependent protease La [Yersinia pseudotuberculosis
IP 32953]
gi|149364999|ref|ZP_01887034.1| ATP-dependent protease La [Yersinia pestis CA88-4125]
gi|153947460|ref|YP_001402050.1| DNA-binding ATP-dependent protease La [Yersinia pseudotuberculosis
IP 31758]
gi|165926531|ref|ZP_02222363.1| ATP-dependent protease La [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165935974|ref|ZP_02224544.1| ATP-dependent protease La [Yersinia pestis biovar Orientalis str.
IP275]
gi|166010976|ref|ZP_02231874.1| ATP-dependent protease La [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213130|ref|ZP_02239165.1| ATP-dependent protease La [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399401|ref|ZP_02304925.1| ATP-dependent protease La [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421541|ref|ZP_02313294.1| ATP-dependent protease La [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423644|ref|ZP_02315397.1| ATP-dependent protease La [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186894328|ref|YP_001871440.1| DNA-binding ATP-dependent protease La [Yersinia pseudotuberculosis
PB1/+]
gi|218930185|ref|YP_002348060.1| DNA-binding ATP-dependent protease La [Yersinia pestis CO92]
gi|229838759|ref|ZP_04458918.1| DNA-binding ATP-dependent protease La [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229896087|ref|ZP_04511257.1| DNA-binding ATP-dependent protease La [Yersinia pestis Pestoides A]
gi|229899327|ref|ZP_04514470.1| DNA-binding ATP-dependent protease La [Yersinia pestis biovar
Orientalis str. India 195]
gi|229901329|ref|ZP_04516451.1| DNA-binding ATP-dependent protease La [Yersinia pestis Nepal516]
gi|270489515|ref|ZP_06206589.1| endopeptidase La [Yersinia pestis KIM D27]
gi|294504886|ref|YP_003568948.1| ATP-dependent protease La [Yersinia pestis Z176003]
gi|384127207|ref|YP_005509821.1| ATP-dependent protease La [Yersinia pestis D182038]
gi|384139001|ref|YP_005521703.1| DNA-binding ATP-dependent protease La [Yersinia pestis A1122]
gi|384415837|ref|YP_005625199.1| DNA-binding ATP-dependent protease La [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|420548219|ref|ZP_15046047.1| ATP-dependent protease La [Yersinia pestis PY-01]
gi|420553560|ref|ZP_15050816.1| ATP-dependent protease La [Yersinia pestis PY-02]
gi|420559161|ref|ZP_15055692.1| ATP-dependent protease La [Yersinia pestis PY-03]
gi|420564555|ref|ZP_15060526.1| ATP-dependent protease La [Yersinia pestis PY-04]
gi|420569605|ref|ZP_15065111.1| ATP-dependent protease La [Yersinia pestis PY-05]
gi|420575261|ref|ZP_15070231.1| ATP-dependent protease La [Yersinia pestis PY-06]
gi|420580580|ref|ZP_15075065.1| ATP-dependent protease La [Yersinia pestis PY-07]
gi|420585930|ref|ZP_15079911.1| ATP-dependent protease La [Yersinia pestis PY-08]
gi|420591041|ref|ZP_15084507.1| ATP-dependent protease La [Yersinia pestis PY-09]
gi|420596434|ref|ZP_15089359.1| ATP-dependent protease La [Yersinia pestis PY-10]
gi|420602096|ref|ZP_15094396.1| ATP-dependent protease La [Yersinia pestis PY-11]
gi|420607526|ref|ZP_15099302.1| ATP-dependent protease La [Yersinia pestis PY-12]
gi|420612909|ref|ZP_15104133.1| ATP-dependent protease La [Yersinia pestis PY-13]
gi|420618295|ref|ZP_15108828.1| ATP-dependent protease La [Yersinia pestis PY-14]
gi|420623583|ref|ZP_15113591.1| ATP-dependent protease La [Yersinia pestis PY-15]
gi|420628674|ref|ZP_15118211.1| ATP-dependent protease La [Yersinia pestis PY-16]
gi|420633803|ref|ZP_15122804.1| ATP-dependent protease La [Yersinia pestis PY-19]
gi|420638998|ref|ZP_15127487.1| ATP-dependent protease La [Yersinia pestis PY-25]
gi|420644475|ref|ZP_15132479.1| ATP-dependent protease La [Yersinia pestis PY-29]
gi|420649754|ref|ZP_15137252.1| ATP-dependent protease La [Yersinia pestis PY-32]
gi|420655392|ref|ZP_15142319.1| ATP-dependent protease La [Yersinia pestis PY-34]
gi|420660900|ref|ZP_15147252.1| ATP-dependent protease La [Yersinia pestis PY-36]
gi|420666182|ref|ZP_15152003.1| ATP-dependent protease La [Yersinia pestis PY-42]
gi|420671049|ref|ZP_15156436.1| ATP-dependent protease La [Yersinia pestis PY-45]
gi|420676404|ref|ZP_15161305.1| ATP-dependent protease La [Yersinia pestis PY-46]
gi|420682022|ref|ZP_15166382.1| ATP-dependent protease La [Yersinia pestis PY-47]
gi|420687356|ref|ZP_15171120.1| ATP-dependent protease La [Yersinia pestis PY-48]
gi|420692575|ref|ZP_15175706.1| ATP-dependent protease La [Yersinia pestis PY-52]
gi|420698335|ref|ZP_15180771.1| ATP-dependent protease La [Yersinia pestis PY-53]
gi|420704161|ref|ZP_15185408.1| ATP-dependent protease La [Yersinia pestis PY-54]
gi|420709528|ref|ZP_15190165.1| ATP-dependent protease La [Yersinia pestis PY-55]
gi|420714991|ref|ZP_15195023.1| ATP-dependent protease La [Yersinia pestis PY-56]
gi|420720503|ref|ZP_15199751.1| ATP-dependent protease La [Yersinia pestis PY-58]
gi|420725978|ref|ZP_15204567.1| ATP-dependent protease La [Yersinia pestis PY-59]
gi|420731564|ref|ZP_15209588.1| ATP-dependent protease La [Yersinia pestis PY-60]
gi|420736581|ref|ZP_15214119.1| ATP-dependent protease La [Yersinia pestis PY-61]
gi|420742058|ref|ZP_15219040.1| ATP-dependent protease La [Yersinia pestis PY-63]
gi|420747776|ref|ZP_15223877.1| ATP-dependent protease La [Yersinia pestis PY-64]
gi|420753213|ref|ZP_15228729.1| ATP-dependent protease La [Yersinia pestis PY-65]
gi|420758991|ref|ZP_15233385.1| ATP-dependent protease La [Yersinia pestis PY-66]
gi|420764267|ref|ZP_15238011.1| ATP-dependent protease La [Yersinia pestis PY-71]
gi|420769490|ref|ZP_15242696.1| ATP-dependent protease La [Yersinia pestis PY-72]
gi|420774471|ref|ZP_15247207.1| ATP-dependent protease La [Yersinia pestis PY-76]
gi|420780089|ref|ZP_15252152.1| ATP-dependent protease La [Yersinia pestis PY-88]
gi|420785685|ref|ZP_15257043.1| ATP-dependent protease La [Yersinia pestis PY-89]
gi|420790831|ref|ZP_15261664.1| ATP-dependent protease La [Yersinia pestis PY-90]
gi|420796354|ref|ZP_15266629.1| ATP-dependent protease La [Yersinia pestis PY-91]
gi|420801408|ref|ZP_15271173.1| ATP-dependent protease La [Yersinia pestis PY-92]
gi|420806765|ref|ZP_15276023.1| ATP-dependent protease La [Yersinia pestis PY-93]
gi|420812131|ref|ZP_15280843.1| ATP-dependent protease La [Yersinia pestis PY-94]
gi|420817646|ref|ZP_15285825.1| ATP-dependent protease La [Yersinia pestis PY-95]
gi|420822951|ref|ZP_15290584.1| ATP-dependent protease La [Yersinia pestis PY-96]
gi|420828032|ref|ZP_15295151.1| ATP-dependent protease La [Yersinia pestis PY-98]
gi|420833728|ref|ZP_15300298.1| ATP-dependent protease La [Yersinia pestis PY-99]
gi|420838588|ref|ZP_15304687.1| ATP-dependent protease La [Yersinia pestis PY-100]
gi|420843779|ref|ZP_15309399.1| ATP-dependent protease La [Yersinia pestis PY-101]
gi|420849436|ref|ZP_15314481.1| ATP-dependent protease La [Yersinia pestis PY-102]
gi|420855104|ref|ZP_15319282.1| ATP-dependent protease La [Yersinia pestis PY-103]
gi|420860296|ref|ZP_15323852.1| ATP-dependent protease La [Yersinia pestis PY-113]
gi|421764659|ref|ZP_16201447.1| DNA-binding ATP-dependent protease La [Yersinia pestis INS]
gi|51588593|emb|CAH20201.1| DNA-binding, ATP-dependent protease la; cleaves RcsA and SulA, heat
shock k-protein [Yersinia pseudotuberculosis IP 32953]
gi|115348796|emb|CAL21750.1| ATP-dependent protease La [Yersinia pestis CO92]
gi|149291412|gb|EDM41486.1| ATP-dependent protease La [Yersinia pestis CA88-4125]
gi|152958955|gb|ABS46416.1| ATP-dependent protease La [Yersinia pseudotuberculosis IP 31758]
gi|165916119|gb|EDR34726.1| ATP-dependent protease La [Yersinia pestis biovar Orientalis str.
IP275]
gi|165921459|gb|EDR38656.1| ATP-dependent protease La [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989976|gb|EDR42277.1| ATP-dependent protease La [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205917|gb|EDR50397.1| ATP-dependent protease La [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960460|gb|EDR56481.1| ATP-dependent protease La [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051905|gb|EDR63313.1| ATP-dependent protease La [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057814|gb|EDR67560.1| ATP-dependent protease La [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|186697354|gb|ACC87983.1| ATP-dependent protease La [Yersinia pseudotuberculosis PB1/+]
gi|229681258|gb|EEO77352.1| DNA-binding ATP-dependent protease La [Yersinia pestis Nepal516]
gi|229687729|gb|EEO79802.1| DNA-binding ATP-dependent protease La [Yersinia pestis biovar
Orientalis str. India 195]
gi|229695125|gb|EEO85172.1| DNA-binding ATP-dependent protease La [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229701010|gb|EEO89039.1| DNA-binding ATP-dependent protease La [Yersinia pestis Pestoides A]
gi|262366871|gb|ACY63428.1| ATP-dependent protease La [Yersinia pestis D182038]
gi|270338019|gb|EFA48796.1| endopeptidase La [Yersinia pestis KIM D27]
gi|294355345|gb|ADE65686.1| ATP-dependent protease La [Yersinia pestis Z176003]
gi|320016341|gb|ADV99912.1| DNA-binding ATP-dependent protease La [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342854130|gb|AEL72683.1| DNA-binding ATP-dependent protease La [Yersinia pestis A1122]
gi|391423526|gb|EIQ85999.1| ATP-dependent protease La [Yersinia pestis PY-01]
gi|391423948|gb|EIQ86383.1| ATP-dependent protease La [Yersinia pestis PY-02]
gi|391424058|gb|EIQ86480.1| ATP-dependent protease La [Yersinia pestis PY-03]
gi|391438454|gb|EIQ99197.1| ATP-dependent protease La [Yersinia pestis PY-04]
gi|391439560|gb|EIR00200.1| ATP-dependent protease La [Yersinia pestis PY-05]
gi|391443396|gb|EIR03715.1| ATP-dependent protease La [Yersinia pestis PY-06]
gi|391455355|gb|EIR14479.1| ATP-dependent protease La [Yersinia pestis PY-07]
gi|391456211|gb|EIR15258.1| ATP-dependent protease La [Yersinia pestis PY-08]
gi|391458194|gb|EIR17075.1| ATP-dependent protease La [Yersinia pestis PY-09]
gi|391471129|gb|EIR28716.1| ATP-dependent protease La [Yersinia pestis PY-10]
gi|391472595|gb|EIR30041.1| ATP-dependent protease La [Yersinia pestis PY-11]
gi|391473489|gb|EIR30863.1| ATP-dependent protease La [Yersinia pestis PY-12]
gi|391487273|gb|EIR43223.1| ATP-dependent protease La [Yersinia pestis PY-13]
gi|391488753|gb|EIR44562.1| ATP-dependent protease La [Yersinia pestis PY-15]
gi|391489122|gb|EIR44901.1| ATP-dependent protease La [Yersinia pestis PY-14]
gi|391503169|gb|EIR57385.1| ATP-dependent protease La [Yersinia pestis PY-16]
gi|391503383|gb|EIR57583.1| ATP-dependent protease La [Yersinia pestis PY-19]
gi|391508658|gb|EIR62375.1| ATP-dependent protease La [Yersinia pestis PY-25]
gi|391519186|gb|EIR71839.1| ATP-dependent protease La [Yersinia pestis PY-29]
gi|391520924|gb|EIR73440.1| ATP-dependent protease La [Yersinia pestis PY-34]
gi|391521814|gb|EIR74251.1| ATP-dependent protease La [Yersinia pestis PY-32]
gi|391533875|gb|EIR85116.1| ATP-dependent protease La [Yersinia pestis PY-36]
gi|391536799|gb|EIR87749.1| ATP-dependent protease La [Yersinia pestis PY-42]
gi|391539182|gb|EIR89925.1| ATP-dependent protease La [Yersinia pestis PY-45]
gi|391552139|gb|EIS01589.1| ATP-dependent protease La [Yersinia pestis PY-46]
gi|391552448|gb|EIS01869.1| ATP-dependent protease La [Yersinia pestis PY-47]
gi|391552915|gb|EIS02299.1| ATP-dependent protease La [Yersinia pestis PY-48]
gi|391567028|gb|EIS14943.1| ATP-dependent protease La [Yersinia pestis PY-52]
gi|391568180|gb|EIS15941.1| ATP-dependent protease La [Yersinia pestis PY-53]
gi|391572898|gb|EIS20066.1| ATP-dependent protease La [Yersinia pestis PY-54]
gi|391581432|gb|EIS27316.1| ATP-dependent protease La [Yersinia pestis PY-55]
gi|391583693|gb|EIS29323.1| ATP-dependent protease La [Yersinia pestis PY-56]
gi|391594115|gb|EIS38314.1| ATP-dependent protease La [Yersinia pestis PY-58]
gi|391597165|gb|EIS41014.1| ATP-dependent protease La [Yersinia pestis PY-60]
gi|391598288|gb|EIS42025.1| ATP-dependent protease La [Yersinia pestis PY-59]
gi|391611580|gb|EIS53744.1| ATP-dependent protease La [Yersinia pestis PY-61]
gi|391612095|gb|EIS54206.1| ATP-dependent protease La [Yersinia pestis PY-63]
gi|391615074|gb|EIS56881.1| ATP-dependent protease La [Yersinia pestis PY-64]
gi|391624692|gb|EIS65295.1| ATP-dependent protease La [Yersinia pestis PY-65]
gi|391629472|gb|EIS69403.1| ATP-dependent protease La [Yersinia pestis PY-66]
gi|391635416|gb|EIS74580.1| ATP-dependent protease La [Yersinia pestis PY-71]
gi|391637427|gb|EIS76347.1| ATP-dependent protease La [Yersinia pestis PY-72]
gi|391647377|gb|EIS85010.1| ATP-dependent protease La [Yersinia pestis PY-76]
gi|391651072|gb|EIS88295.1| ATP-dependent protease La [Yersinia pestis PY-88]
gi|391655512|gb|EIS92244.1| ATP-dependent protease La [Yersinia pestis PY-89]
gi|391660282|gb|EIS96457.1| ATP-dependent protease La [Yersinia pestis PY-90]
gi|391667868|gb|EIT03149.1| ATP-dependent protease La [Yersinia pestis PY-91]
gi|391677426|gb|EIT11734.1| ATP-dependent protease La [Yersinia pestis PY-93]
gi|391678248|gb|EIT12480.1| ATP-dependent protease La [Yersinia pestis PY-92]
gi|391678731|gb|EIT12919.1| ATP-dependent protease La [Yersinia pestis PY-94]
gi|391691366|gb|EIT24302.1| ATP-dependent protease La [Yersinia pestis PY-95]
gi|391694287|gb|EIT26960.1| ATP-dependent protease La [Yersinia pestis PY-96]
gi|391696019|gb|EIT28547.1| ATP-dependent protease La [Yersinia pestis PY-98]
gi|391708093|gb|EIT39378.1| ATP-dependent protease La [Yersinia pestis PY-99]
gi|391711591|gb|EIT42544.1| ATP-dependent protease La [Yersinia pestis PY-100]
gi|391712445|gb|EIT43323.1| ATP-dependent protease La [Yersinia pestis PY-101]
gi|391724274|gb|EIT53866.1| ATP-dependent protease La [Yersinia pestis PY-102]
gi|391725024|gb|EIT54531.1| ATP-dependent protease La [Yersinia pestis PY-103]
gi|391727617|gb|EIT56808.1| ATP-dependent protease La [Yersinia pestis PY-113]
gi|411174210|gb|EKS44243.1| DNA-binding ATP-dependent protease La [Yersinia pestis INS]
Length = 784
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/766 (43%), Positives = 460/766 (60%), Gaps = 89/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEME-----QVEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE M E E + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPVMDDREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLASLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DTPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIMSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R AVK N L D +E+ G++
Sbjct: 544 LEREISKLCRK-AVK-------------------------NLLMDKTVKHIEI--NGDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L+ LG + D A RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
HR GIK V++P+ N +DL E+P V+A LEI KR++DVL A E
Sbjct: 727 HRGGIKVVLIPDDNKRDLEEIPDNVIADLEIHPVKRIDDVLAIALE 772
>gi|359446705|ref|ZP_09236356.1| ATP-dependent Lon protease [Pseudoalteromonas sp. BSi20439]
gi|392554154|ref|ZP_10301291.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Pseudoalteromonas undina NCIMB 2128]
gi|358039511|dbj|GAA72605.1| ATP-dependent Lon protease [Pseudoalteromonas sp. BSi20439]
Length = 786
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 325/778 (41%), Positives = 465/778 (59%), Gaps = 88/778 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EME 107
G A L L ++ P G V V++EG R +++E ++ A +E + E E
Sbjct: 72 GTIATVLQL---LKLPDGTVK--VLVEGTQRANIEEFVDNEDFFVANAQFIESDSVNEQE 126
Query: 108 Q-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
Q + Q ++ L+++ M +S +++ + LAD
Sbjct: 127 QDIFIRSALSQFEGYVKLNKKIPPEVMTSVSGIDEPAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E+ +L+ + RL L++ + ++V +KI +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKVPEKQKVLEISSVTERLEYLMALMEGEIDLLQVEKKIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELG+ DD D+ AL+++++ +GMP+ + E +LK M P +
Sbjct: 231 NEQMKAIQKELGEIDDVPDEFEALKKRIEESGMPNEAKEKATAEFNKLKMMSPMSAEASV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + ++PW+K S+ + DL A++ LDSDHYGL +VK+RIIEYLAV++ +G
Sbjct: 291 VRSYIDTLINVPWKKRSK-VKKDLAGAQKILDSDHYGLDKVKERIIEYLAVQQRTNKLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA + GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI
Sbjct: 350 PILCLVGPPGVGKTSLGQSIARSTGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQN 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK +D+RGDPASALLEVLDPEQN F DHYL V +DLS V+FV
Sbjct: 410 MTKVGVKNPLFLLDEIDKMSADMRGDPASALLEVLDPEQNSHFADHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI L GYT +EKL IA HLIP+ + ++GL + ++I ++ +
Sbjct: 470 ATSNSFN-IPGPLLDRMEVIRLAGYTEDEKLNIAKEHLIPKQVKRNGLKEKEVEIADSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVRNLER ++ L R A + ++
Sbjct: 529 IGIIRYYTREAGVRNLEREVSKLCRKAVKNILMEKD------------------------ 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGI 638
T + +D LE+ LG RFD E +R+ G
Sbjct: 565 ------------------------TKTVTIDADNLEEYLGVQRFDYGKAEDGDRI---GQ 597
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
GL WT GG++ +E A+ GKG+L TG LGDV++ES Q A+T VR RA +L++
Sbjct: 598 VTGLAWTEVGGDLLTIECAAVPGKGKLTYTGSLGDVMQESIQAAMTVVRNRADELRI--- 654
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ + RDIH+H P GA PKDGPSAG+ +VT LVS + VR+D AMTGE+TLRG V
Sbjct: 655 -NSDFYEKRDIHVHVPEGATPKDGPSAGIAMVTCLVSSLTGNPVRSDVAMTGEITLRGEV 713
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K+LAAHR GIK V++P+ N +DL E+P VLA LEI +++VL+ A
Sbjct: 714 LPIGGLKEKLLAAHRGGIKTVVIPKINERDLKEIPDNVLAGLEIHPVTWIDEVLKLAL 771
>gi|416653403|ref|ZP_11811847.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214177|gb|EFZ98935.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
Length = 739
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 39 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 96
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 97 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 140
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 141 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 200
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 201 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 259
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 260 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 319
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 320 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 379
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 380 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 438
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 439 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 498
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 499 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 530
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 531 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 567
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 568 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 621
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 622 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 681
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 682 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 728
>gi|162418498|ref|YP_001607418.1| DNA-binding ATP-dependent protease La [Yersinia pestis Angola]
gi|162351313|gb|ABX85261.1| ATP-dependent protease La [Yersinia pestis Angola]
Length = 784
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 333/766 (43%), Positives = 460/766 (60%), Gaps = 89/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEME-----QVEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE M E E + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPVMDDREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLASLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DTPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 HSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIMSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R AVK N L D +E+ G++
Sbjct: 544 LEREISKLCRK-AVK-------------------------NLLMDKTVKHIEI--NGDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L+ LG + D A RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
HR GIK V++P+ N +DL E+P V+A LEI KR++DVL A E
Sbjct: 727 HRGGIKVVLIPDDNKRDLEEIPDNVIADLEIHPVKRIDDVLAIALE 772
>gi|170767749|ref|ZP_02902202.1| ATP-dependent protease La [Escherichia albertii TW07627]
gi|170123237|gb|EDS92168.1| ATP-dependent protease La [Escherichia albertii TW07627]
Length = 784
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPENVIADLDIHPVKRIEEVLTLALQN 773
>gi|421884326|ref|ZP_16315541.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|379986040|emb|CCF87814.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
Length = 784
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDINERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|397167169|ref|ZP_10490612.1| ATP-dependent protease La [Enterobacter radicincitans DSM 16656]
gi|396091315|gb|EJI88882.1| ATP-dependent protease La [Enterobacter radicincitans DSM 16656]
Length = 784
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 330/765 (43%), Positives = 460/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + L+ G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLADDGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAESELQKLKMMSPMSAEATVVRGYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRMNKLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+ + ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLTKQIERNALKDSELTVDDSAIVGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDPSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
H+ LG RFD A + G GL WT GG++ +E
Sbjct: 576 HD--------------------YLGVQRFDYGRADDENRV-GQVTGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHF 713
+ GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H
Sbjct: 615 TACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPYENKRDLEEIPDNVVADLDIHPVKRIEEVLSLALQN 773
>gi|451967073|ref|ZP_21920320.1| Lon protease [Edwardsiella tarda NBRC 105688]
gi|451314226|dbj|GAC65682.1| Lon protease [Edwardsiella tarda NBRC 105688]
Length = 784
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 325/766 (42%), Positives = 460/766 (60%), Gaps = 85/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSL---EMTKIEME-----QVEQDPDF 115
P G V V++EG+ R + LS G ++ A+ L EM + E E + Q +
Sbjct: 84 PDGTVK--VLVEGIQRARITTLSDGGEHFAAQAEYLATPEMDEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLNDKQTVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDVAERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + EL++LK M P T R Y++ I +PW
Sbjct: 246 DTPDEFEALKRKIEAAKMPKEAREKAEAELQKLKMMSPMSAEATVVRGYIDWIVQVPWH- 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRKAQETLDADHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVRNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIARQHLLPKQIERNALKKGELTVDDSAIVGIIRYYTREAGVRA 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLRH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG RFD ++ RV G GL WT GG++
Sbjct: 568 ------------IEINGDNLKDYLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E ++ GKG+L TG LG+V++ES Q ALT VRARA L + + + RDIH+H
Sbjct: 613 IETASVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGI----NQDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
GIK V++P+ N +DL E+P VL L+I KR+++VL A +
Sbjct: 729 GGIKTVLIPDDNKRDLEEMPENVLRDLDIHPVKRIDEVLTLALQNA 774
>gi|399116311|emb|CCG19116.1| ATP-dependent protease La [Taylorella asinigenitalis 14/45]
Length = 812
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 329/769 (42%), Positives = 466/769 (60%), Gaps = 62/769 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
GV A L L ++ P G T V++EG+ R + + G ++ A S +E T + +Q
Sbjct: 73 GVVANILQL---IKLPDG--TIKVLVEGVERVLIDSIEDDGNHFMATGSIVETTISDEDQ 127
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFE 168
V L R T E + + ++ + +L P+ + AD A I+
Sbjct: 128 VS------PLVRTV-GTKFEEFAKINKRLQPDVVQSILRIEDPV-RFADTICAQLHINQS 179
Query: 169 EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIK 228
++ +L+ DL RL+ ++ + I + +KI +V+ Q+ KSQ+++ L +Q++AI+
Sbjct: 180 KKQSLLEKEDLVDRLNSLLFYLEYEMDIISLEKKIQDRVKKQMEKSQRDYYLNEQIKAIQ 239
Query: 229 EELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELI 288
+ELG+ +D D L ALE+K++ AGMP + V EL++LK+M P R Y++ +
Sbjct: 240 KELGEGEDGAD-LEALEKKIKDAGMPPETEEKVLSELKKLKQMAPMSAEAAVIRSYIDAV 298
Query: 289 ADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGP 348
+PW+K S+ ++ L A+E LD+DHYGL +VK+RI+EYLAV+K + P+LC VGP
Sbjct: 299 VAVPWKKKSK-VNTKLSFAQETLDADHYGLEKVKERIVEYLAVQKRGNKLKAPILCLVGP 357
Query: 349 PGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCN 408
PGVGKTSL SIA A RK++R++LGG+ DE++IRGHRRTYIG+MPG++I + +VGV N
Sbjct: 358 PGVGKTSLGQSIARATNRKYVRMALGGMHDESEIRGHRRTYIGAMPGKIIQNMTKVGVKN 417
Query: 409 PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQP 468
P+ LLDEIDK G D RGDPA+ALLEVLDPEQN TF DHYL V +DLS V+FVAT+N
Sbjct: 418 PLFLLDEIDKIGQDYRGDPAAALLEVLDPEQNNTFQDHYLEVDYDLSDVLFVATSNTMN- 476
Query: 469 IPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYT 528
IP PLLDRMEVI L GYT +EKL IA HLIP+++ +G+ L+I ++ + +++ YT
Sbjct: 477 IPAPLLDRMEVIRLSGYTEDEKLHIAKDHLIPKLMKNNGIKKGELRIDDSAIIDIVRYYT 536
Query: 529 REAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEV 588
REAGVR+LER L + R V ++E+E +SK V
Sbjct: 537 REAGVRSLERELGKICRKVVKAVVQKEEE----TSKKVA--------------------- 571
Query: 589 IPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFG 648
T+ VVD L+K LG +F AE+ G GL WT G
Sbjct: 572 ----------------TTLTVVDSENLDKYLGVRKF-TFGLAEKENRIGQVTGLAWTEVG 614
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
G++ +E ++GKG++ TG LGDV+KES +A T +R+ A L NL + +D
Sbjct: 615 GDLLSIEVAVVQGKGQIQHTGSLGDVMKESMSVARTVIRSWAYQLGFFD----NLFEKKD 670
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
+HIH P GA PKDGPSAG+ + TALVS +S VRAD AMTGE+TLRG VL +GG+K+K+
Sbjct: 671 MHIHVPDGATPKDGPSAGIAVTTALVSAYSGIPVRADVAMTGEITLRGEVLAIGGLKEKL 730
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LAA R GIK+V++P+ N+KDL E+P V LEII K + +VLE A E
Sbjct: 731 LAALRGGIKKVLIPQENVKDLAEIPDNVKNGLEIIPVKWINEVLEHALE 779
>gi|291278627|ref|YP_003495462.1| ATP-dependent Lon protease [Deferribacter desulfuricans SSM1]
gi|290753329|dbj|BAI79706.1| ATP-dependent Lon protease [Deferribacter desulfuricans SSM1]
Length = 772
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 298/667 (44%), Positives = 420/667 (62%), Gaps = 56/667 (8%)
Query: 152 IHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQL 211
++K+ + ++ +I + +L+ + R K EL+ ++ ++ E+I +V+ Q+
Sbjct: 159 LNKITYLIASNLQIRLNDLQTVLEIDSVVERAEKLIELLQTEIEIAKIDERIKHRVKAQM 218
Query: 212 SKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKM 271
SK+Q+E+ L +Q++AI++ELG DD + D+ +E K+ MP + + +ELR+LK M
Sbjct: 219 SKAQREYYLNEQIKAIQKELGREDDLKADIEEIEAKINELEMPEEVKEKAARELRKLKIM 278
Query: 272 QPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAV 331
P T R YL+ + +LPW +E+ +D+K A+E LD DHYGL +VK+RI+E+LAV
Sbjct: 279 PPMSAETTVVRNYLDWLVNLPWGVYTED-KIDIKKAEEILDRDHYGLEKVKERILEFLAV 337
Query: 332 RKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIG 391
RK+ PD +GP++CFVGPPGVGKTSLA SIA ALGR F+RISLGGV+DEA+IRGHRRTYIG
Sbjct: 338 RKVSPDIKGPIICFVGPPGVGKTSLAKSIAEALGRNFVRISLGGVRDEAEIRGHRRTYIG 397
Query: 392 SMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP 451
++PG+LI +++ NPV LLDEIDK GSD RGDP+SALLE LDPEQN +F DHYL V
Sbjct: 398 ALPGKLIQSMRKAKSMNPVFLLDEIDKLGSDFRGDPSSALLEALDPEQNSSFMDHYLEVE 457
Query: 452 FDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSE 511
FDLSKV F+ TAN + IP LLDRMEVI + GYT +EK IA + LIP+ L++H + +E
Sbjct: 458 FDLSKVFFITTANTTETIPSALLDRMEVIYISGYTEKEKFNIAKKFLIPKQLNEHKIDAE 517
Query: 512 FLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK-VAEQEQEQALPSSKDVHRLG 570
++I ++ + +I YTREAGVRNLER +AAL R + V+E+ ++ + SSK++
Sbjct: 518 KVKITDSAINELIWYYTREAGVRNLEREIAALVRKGVKRLVSEENIKRVVISSKNI---- 573
Query: 571 SPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAA 630
EK LG ++ E
Sbjct: 574 ---------------------------------------------EKYLGIRKYRIEEVE 588
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARA 690
E G++ GL WT +GGE+ E G G++ +TGQ+G+V++ESAQ ALT V++RA
Sbjct: 589 EDYEV-GVATGLAWTPYGGEILQTEVAIFEGNGKMAITGQIGEVMQESAQAALTVVKSRA 647
Query: 691 TDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTG 750
Q+ + D+HIH P GAVPKDGPSAG+T+ TA++S + V AMTG
Sbjct: 648 GKYQIPD----YRFKEFDMHIHVPEGAVPKDGPSAGITIATAIMSALTDNPVNCRVAMTG 703
Query: 751 EMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMED 810
E+TLRG V PVGG+K+K+LAAHR +K VILP N KDL E+PA V + L K +++
Sbjct: 704 EITLRGKVFPVGGIKEKVLAAHRAKLKDVILPAENNKDLTEIPADVKRDIRFHLVKAIDE 763
Query: 811 VLEQAFE 817
V E F+
Sbjct: 764 VFEIVFK 770
>gi|315127187|ref|YP_004069190.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Pseudoalteromonas sp. SM9913]
gi|315015701|gb|ADT69039.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Pseudoalteromonas sp. SM9913]
Length = 786
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 325/778 (41%), Positives = 467/778 (60%), Gaps = 88/778 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EME 107
G A L L ++ P G V V++EG R +++E ++ A +E + E E
Sbjct: 72 GTIATVLQL---LKLPDGTVK--VLVEGTQRANIEEFVDNEDFFVANAQFIESDSVNEQE 126
Query: 108 Q-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
Q + Q ++ L+++ M +S +++ + LAD
Sbjct: 127 QDIFIRSALSQFEGYVKLNKKIPPEVMTSVSGIDEPAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E+ +L+ + RL L++ + ++V +KI +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKVPEKQKVLEISSVTERLEYLMALMEGEIDLLQVEKKIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELG+ DD D+ AL+++++ +GMPS + EL +LK M P +
Sbjct: 231 NEQMKAIQKELGEIDDVPDEFEALKKRIEESGMPSEAKEKATAELNKLKMMSPMSAEASV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + ++PW+K S+ + DL A++ LDSDH+GL +VK+RIIEYLAV++ +G
Sbjct: 291 VRSYIDTLINVPWKKRSK-VKKDLAGAQKILDSDHHGLDKVKERIIEYLAVQQRTNKLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA + GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI
Sbjct: 350 PILCLVGPPGVGKTSLGQSIARSTGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQN 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK +D+RGDPASALLEVLDPEQN F DHYL V +DLS V+FV
Sbjct: 410 MTKVGVKNPLFLLDEIDKMSADMRGDPASALLEVLDPEQNSHFADHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI L GYT +EKL IA HLIP+ + ++GL ++ ++I ++ +
Sbjct: 470 ATSNSFN-IPGPLLDRMEVIRLSGYTEDEKLNIAKEHLIPKQIKRNGLKAKEVEIADSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVRNLER ++ L R A + ++
Sbjct: 529 IGIIRYYTREAGVRNLEREVSKLCRKAVKNILIEKD------------------------ 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGI 638
T + +D LE+ LG RFD E +R+ G
Sbjct: 565 ------------------------TKTVTIDADNLEEYLGVQRFDYGKAEDGDRI---GQ 597
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
GL WT GG++ +E A+ GKG+L TG LGDV++ES Q A+T VR RA +L++
Sbjct: 598 VTGLAWTEVGGDLLTIECAAVPGKGKLTYTGSLGDVMQESIQAAMTVVRNRADELRI--- 654
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ + RDIH+H P GA PKDGPSAG+ +VT LVS + VR+D AMTGE+TLRG V
Sbjct: 655 -NSDFYEKRDIHVHVPEGATPKDGPSAGIAMVTCLVSSLTGNAVRSDVAMTGEITLRGEV 713
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K+LAAHR GIK VI+P+ N +DL E+P VLA L+I +++VL+ A
Sbjct: 714 LPIGGLKEKLLAAHRGGIKTVIIPKINERDLKEIPDNVLAGLDIHPVTWIDEVLKLAL 771
>gi|30061941|ref|NP_836112.1| DNA-binding ATP-dependent protease La [Shigella flexneri 2a str.
2457T]
gi|56479659|ref|NP_706333.2| DNA-binding ATP-dependent protease La [Shigella flexneri 2a str.
301]
gi|110804467|ref|YP_687987.1| DNA-binding ATP-dependent protease La [Shigella flexneri 5 str.
8401]
gi|384541995|ref|YP_005726056.1| ATP-dependent protease La [Shigella flexneri 2002017]
gi|415859377|ref|ZP_11533652.1| ATP-dependent protease La [Shigella flexneri 2a str. 2457T]
gi|417700514|ref|ZP_12349654.1| ATP-dependent protease La [Shigella flexneri K-218]
gi|417737260|ref|ZP_12385866.1| ATP-dependent protease La [Shigella flexneri 4343-70]
gi|418253619|ref|ZP_12878644.1| ATP-dependent protease La [Shigella flexneri 6603-63]
gi|30040185|gb|AAP15918.1| DNA-binding, ATP-dependent protease La; heat shock K-protein
[Shigella flexneri 2a str. 2457T]
gi|56383210|gb|AAN42040.2| DNA-binding, ATP-dependent protease La; heat shock K-protein
[Shigella flexneri 2a str. 301]
gi|110614015|gb|ABF02682.1| DNA-binding, ATP-dependent protease La [Shigella flexneri 5 str.
8401]
gi|281599779|gb|ADA72763.1| ATP-dependent protease La [Shigella flexneri 2002017]
gi|313646934|gb|EFS11391.1| ATP-dependent protease La [Shigella flexneri 2a str. 2457T]
gi|332760730|gb|EGJ91018.1| ATP-dependent protease La [Shigella flexneri 4343-70]
gi|333007891|gb|EGK27367.1| ATP-dependent protease La [Shigella flexneri K-218]
gi|397901493|gb|EJL17839.1| ATP-dependent protease La [Shigella flexneri 6603-63]
Length = 784
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 463/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DVPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G +GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVIGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|296101561|ref|YP_003611707.1| DNA-binding ATP-dependent protease La/heat shock K-protein
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|392977877|ref|YP_006476465.1| DNA-binding ATP-dependent protease La [Enterobacter cloacae subsp.
dissolvens SDM]
gi|295056020|gb|ADF60758.1| DNA-binding ATP-dependent protease La/heat shock K-protein
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|392323810|gb|AFM58763.1| DNA-binding ATP-dependent protease La [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 784
Score = 567 bits (1461), Expect = e-158, Method: Compositional matrix adjust.
Identities = 330/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ ++ E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDNGEHFSAKAEYLDSPQLDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKANELTVEDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L LG RFD A RV G GL WT GG++
Sbjct: 568 ------------ITINGDNLHAYLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPYENKRDLEEIPDNVIADLQIHPVKRIEEVLTLALQN 773
>gi|408356355|ref|YP_006844886.1| ATP-dependent protease La [Amphibacillus xylanus NBRC 15112]
gi|407727126|dbj|BAM47124.1| ATP-dependent protease La [Amphibacillus xylanus NBRC 15112]
Length = 773
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 302/709 (42%), Positives = 443/709 (62%), Gaps = 63/709 (8%)
Query: 112 DPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQL 171
+P IAL R + + + + K+ + L++ + +L D+ + + +
Sbjct: 123 EPKRIALVRTLMSQFKKYVGL--SKKLSTETYSSLMDIDDLSRLTDVISSHLPLKSTIKQ 180
Query: 172 VMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL 231
+L++++++VR EL+ + +R+ +KI ++V+ + ++QKE+ LR+QM+AI++EL
Sbjct: 181 QLLETIEVEVRAQDLIELISNEQEVLRLEQKIDRRVKKSIEQTQKEYYLREQMKAIQKEL 240
Query: 232 GDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELIAD 290
G D ++ L+ K++ +GMP + K KEL R +++ PQ +S R YL+ +
Sbjct: 241 GSRDGKSGEIADLQEKIEQSGMPDRVLKVAMKELDRYERI-PQTSAESSVIRNYLDWLIS 299
Query: 291 LPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPG 350
LPW + +E+ DLD+ A L+ DHYGL +VK+R++E+LAV++L RGP+LC VGPPG
Sbjct: 300 LPWTEETED-DLDINRATSILNEDHYGLEKVKERVLEHLAVQQLTNSLRGPILCLVGPPG 358
Query: 351 VGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPV 410
VGKTSLA SIA A+ R+FIRISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K+ G NPV
Sbjct: 359 VGKTSLAKSIARAINRRFIRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKKAGTINPV 418
Query: 411 MLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIP 470
+LLDEIDK +D RGDP++A+LEVLDPEQN F+DH++ +DLS V+F+ATAN Q IP
Sbjct: 419 ILLDEIDKMTNDFRGDPSAAMLEVLDPEQNHQFSDHFIEESYDLSNVMFIATANNLQTIP 478
Query: 471 PPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTRE 530
PLLDRME+I + GYT EKL IA HLIP+ + HGL LQI + + +I+RY+RE
Sbjct: 479 APLLDRMEIISIAGYTEVEKLHIAKEHLIPKQIAAHGLTKGQLQIRDEAITQLIRRYSRE 538
Query: 531 AGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIP 590
AGVR LER +A++ R A +E+++ + + K + L
Sbjct: 539 AGVRQLERQVASVCRKATKLYVSEEKKRIIVTKKQLENL--------------------- 577
Query: 591 MGESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAERVAAPGISVGLVWTNFG 648
LG P R+ E ++V G + GL +T G
Sbjct: 578 ----------------------------LGKPIYRYGMMETEDQV---GAATGLAYTAAG 606
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
G+ +E + + GKG+L LTG+LGDV+KESAQ AL++VR+R T+L + + Q D
Sbjct: 607 GDTLSIEVSIVPGKGKLALTGKLGDVMKESAQAALSYVRSRTTELSI----DPDFYQTHD 662
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
IHIH P GA PKDGPSAG+T+ TALVS + + VR + MTGE+TLRG VLP+GG+K+K
Sbjct: 663 IHIHVPEGATPKDGPSAGITIATALVSSLTNRPVRREVGMTGEITLRGRVLPIGGLKEKA 722
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
L+AHR G+ +ILP+ N KDLV++P +V SL+ I ++ VLE A +
Sbjct: 723 LSAHRAGLSTIILPKDNEKDLVDIPDSVRKSLDFIPVSHLDQVLEHALK 771
>gi|357419904|ref|YP_004932896.1| ATP-dependent proteinase [Thermovirga lienii DSM 17291]
gi|355397370|gb|AER66799.1| ATP-dependent proteinase [Thermovirga lienii DSM 17291]
Length = 799
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 335/767 (43%), Positives = 457/767 (59%), Gaps = 84/767 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
GV A L + R P G V V++EG+ R V+EL +Y ++ E+E
Sbjct: 89 GVIANVLQMVR---LPDGTVK--VLVEGVKRIYVEELIDSDDFYMCSYKQID----ELEN 139
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGR-----TKVLLETVPIH---KLADIFV 160
+ D L R SVL Q ++ ++L+ + +LAD+
Sbjct: 140 -QDDESLEPLKR----------SVLNQFERYVSLHPRIPPEILMTLSDVEDPSQLADLVA 188
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ + +E+ +L+SVD+K RL K +++ + ++ +++ I +KV+ QL KSQKE+ L
Sbjct: 189 SHLMVKIKERQDILESVDVKERLEKILKVLFQEIELLQLELSIQEKVKQQLEKSQKEYYL 248
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
R+Q+R I+ ELG + E + L + + A MP + EL R+ KM P T
Sbjct: 249 REQLRIIQNELGQEEYSE--IEQLRKSILDAKMPPEAQEKALHELERMAKMPPLSAEATV 306
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD-AR 339
R Y++ + ++PWEK + + +D++ AK+ LD DHYGL K+RI+E+LAVRK +
Sbjct: 307 VRTYIDWLINMPWEKRTRDT-VDIRLAKKVLDEDHYGLDEAKERILEFLAVRKRASGRVK 365
Query: 340 GPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLID 399
VLCFVGPPGVGKTSL SIA A GRKF +SLGG++DEA+IRGHRRTYIGS+PGR+I
Sbjct: 366 SQVLCFVGPPGVGKTSLGRSIAKATGRKFANMSLGGIRDEAEIRGHRRTYIGSLPGRIIQ 425
Query: 400 GLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIF 459
+++VG NPV+LLDEIDK G+D RGDPA+ALLEVLDPEQN F DH+L VPFDLS V+F
Sbjct: 426 KIRQVGTKNPVILLDEIDKIGADFRGDPAAALLEVLDPEQNYAFTDHFLEVPFDLSNVMF 485
Query: 460 VATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAM 519
+ TAN IP PLLDRMEVI+LPGY EEK +IA RHLIP+VL +HGL + L I
Sbjct: 486 ITTANVVHTIPKPLLDRMEVIKLPGYVMEEKYQIAKRHLIPKVLKEHGLSEKELIILPTA 545
Query: 520 VKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLA 579
+K +I YT+EAGVR LER LA +AR ++ E EQ S+ + ++G
Sbjct: 546 IKRIISDYTKEAGVRELERQLAKIARKVTKRIVESEQSNKGASATE--KIG--------- 594
Query: 580 DGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGIS 639
V N L K LG PR D R G
Sbjct: 595 ------------------VKN--------------LRKYLGVPRNYDT-GIPREPQVGAM 621
Query: 640 VGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL--VA 697
VGL WT FGG++ +EA MRGKG + LTG LG+V++ESA+ AL+++++ + +L + V
Sbjct: 622 VGLAWTQFGGDILIIEAVTMRGKGNIILTGNLGEVMQESARAALSYLKSHSDELNIKDVK 681
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
D + DIH+H P GA+PKDGPSAGV L T L S+ S KR+R D A+TGE TLRG+
Sbjct: 682 WDEI------DIHVHVPEGAIPKDGPSAGVALATVLYSVVSGKRIRNDVAITGETTLRGM 735
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIIL 804
VLPVGG+++KILAA RYGIK V+LPE N D+ E+P + L+I
Sbjct: 736 VLPVGGIREKILAAKRYGIKEVLLPEGNKVDVEEMPQWAIKGLKITF 782
>gi|120436204|ref|YP_861890.1| ATP-dependent protease La [Gramella forsetii KT0803]
gi|117578354|emb|CAL66823.1| ATP-dependent protease La [Gramella forsetii KT0803]
Length = 816
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 315/770 (40%), Positives = 454/770 (58%), Gaps = 71/770 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
GV AR L R ++ P G T V+++G RF + E+ T Y A I+ + + E +
Sbjct: 105 GVVARIL---RVLKMPDGNTT--VIIQGKKRFQITEVVTEQPYMNATITEVPDNRPEKDN 159
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FEISF 167
E F A+ K A+++I + ++ + + FV+S +S
Sbjct: 160 AE----FSAIIDSIKDLALQII---KGSPNIPSEASFAIKNIESNSFLINFVSSNMNLSV 212
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
EE+ +L+ DLK R + ++ Q + + I KV+ +S+ Q+E+ L QQM+ I
Sbjct: 213 EEKQKLLEMNDLKERALATLKHMNTENQKLELKNDIQSKVQSDMSQQQREYFLHQQMKTI 272
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
+EELG E ++V + + + ++ H +KEL ++++M PQ Y+ R YL+L
Sbjct: 273 QEELG-GVSHEGEIVEMRDRAKDKQWDEDVKNHFEKELSKMQRMNPQVAEYSIQRNYLDL 331
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
DLPW + S++ DLK AK+ LD DHYGL VK+RIIEYLAV KL+ D + P+LC G
Sbjct: 332 FLDLPWNEFSKD-KFDLKRAKKILDRDHYGLDDVKRRIIEYLAVLKLRNDMKSPILCLYG 390
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL S+A ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR+I LK+ G
Sbjct: 391 PPGVGKTSLGKSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKAGTS 450
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDEIDK GDP+SALLEVLDPEQN F+D++L + FDLSKV+F+AT N
Sbjct: 451 NPVFVLDEIDKLAVGNSGDPSSALLEVLDPEQNSEFHDNFLEMGFDLSKVMFIATCNSLS 510
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
I P L DRME+I + GYT EEK+ IA RHL+P+ L++HGL S+ L+I + ++ V++ Y
Sbjct: 511 TIQPALRDRMEIINVTGYTIEEKVEIAKRHLLPKQLEEHGLNSDHLKIGKKQLEKVVEGY 570
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKD-VHRLGSPLLDNRLADGAEVEM 586
TRE+GVR LE+ +A + R AA +A +E+ S +D + LGSP L
Sbjct: 571 TRESGVRALEKQIAKVVRYAAKNIAMEEEYNIKVSGEDIIEILGSPKL------------ 618
Query: 587 EVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTN 646
+R+ E G+ GL WT
Sbjct: 619 ---------------------------------------ERDKYENNDVAGVVTGLAWTQ 639
Query: 647 FGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQG 706
GG++ F+E+ +GKG L +TG LG V+KESA IA+ +++A A L + ++
Sbjct: 640 VGGDILFIESILSKGKGNLSITGNLGKVMKESATIAMEYIKANAERLGITP----SIFDQ 695
Query: 707 RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKD 766
++HIH P GA PKDGPSAG+T++T+LVSLF++K+++ AMTGE+TLRG VLPVGG+K+
Sbjct: 696 YNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQKKIKKSIAMTGEITLRGKVLPVGGIKE 755
Query: 767 KILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
KILAA R IK +IL E N +D+ E+ + L K M DV++ A
Sbjct: 756 KILAAKRARIKEIILCEDNKRDIEEIKEEYVKGLTFHYVKEMSDVIDIAL 805
>gi|218688303|ref|YP_002396515.1| DNA-binding ATP-dependent protease La [Escherichia coli ED1a]
gi|218425867|emb|CAR06673.1| DNA-binding ATP-dependent protease La [Escherichia coli ED1a]
Length = 784
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|16128424|ref|NP_414973.1| DNA-binding ATP-dependent protease La [Escherichia coli str. K-12
substr. MG1655]
gi|74311014|ref|YP_309433.1| DNA-binding ATP-dependent protease La [Shigella sonnei Ss046]
gi|110640700|ref|YP_668428.1| DNA-binding ATP-dependent protease La [Escherichia coli 536]
gi|157159434|ref|YP_001461626.1| DNA-binding ATP-dependent protease La [Escherichia coli E24377A]
gi|157159966|ref|YP_001457284.1| DNA-binding ATP-dependent protease La [Escherichia coli HS]
gi|170021188|ref|YP_001726142.1| DNA-binding ATP-dependent protease La [Escherichia coli ATCC 8739]
gi|170080025|ref|YP_001729345.1| DNA-binding ATP-dependent protease La [Escherichia coli str. K-12
substr. DH10B]
gi|170682239|ref|YP_001742583.1| DNA-binding ATP-dependent protease La [Escherichia coli SMS-3-5]
gi|188494694|ref|ZP_03001964.1| ATP-dependent protease La [Escherichia coli 53638]
gi|193064117|ref|ZP_03045201.1| ATP-dependent protease La [Escherichia coli E22]
gi|193067578|ref|ZP_03048545.1| ATP-dependent protease La [Escherichia coli E110019]
gi|194437366|ref|ZP_03069463.1| ATP-dependent protease La [Escherichia coli 101-1]
gi|209917656|ref|YP_002291740.1| DNA-binding ATP-dependent protease La [Escherichia coli SE11]
gi|215485520|ref|YP_002327951.1| DNA-binding ATP-dependent protease La [Escherichia coli O127:H6
str. E2348/69]
gi|218553006|ref|YP_002385919.1| DNA-binding ATP-dependent protease La [Escherichia coli IAI1]
gi|218693902|ref|YP_002401569.1| DNA-binding ATP-dependent protease La [Escherichia coli 55989]
gi|218698649|ref|YP_002406278.1| DNA-binding ATP-dependent protease La [Escherichia coli IAI39]
gi|218703723|ref|YP_002411242.1| DNA-binding ATP-dependent protease La [Escherichia coli UMN026]
gi|222155229|ref|YP_002555368.1| ATP-dependent protease La [Escherichia coli LF82]
gi|238899727|ref|YP_002925523.1| DNA-binding ATP-dependent protease La [Escherichia coli BW2952]
gi|251783948|ref|YP_002998252.1| DNA-binding, ATP-dependent protease La [Escherichia coli BL21(DE3)]
gi|253774570|ref|YP_003037401.1| DNA-binding ATP-dependent protease La [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160509|ref|YP_003043617.1| DNA-binding ATP-dependent protease La [Escherichia coli B str.
REL606]
gi|254287313|ref|YP_003053061.1| DNA-binding ATP-dependent protease La [Escherichia coli BL21(DE3)]
gi|260842640|ref|YP_003220418.1| DNA-binding ATP-dependent protease La [Escherichia coli O103:H2
str. 12009]
gi|260853662|ref|YP_003227553.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. 11368]
gi|260866600|ref|YP_003233002.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H-
str. 11128]
gi|293403560|ref|ZP_06647651.1| DNA-binding ATP-dependent protease La [Escherichia coli FVEC1412]
gi|298379172|ref|ZP_06989053.1| DNA-binding ATP-dependent protease La [Escherichia coli FVEC1302]
gi|300818229|ref|ZP_07098440.1| ATP-dependent protease La [Escherichia coli MS 107-1]
gi|300820315|ref|ZP_07100467.1| ATP-dependent protease La [Escherichia coli MS 119-7]
gi|300900510|ref|ZP_07118677.1| ATP-dependent protease La [Escherichia coli MS 198-1]
gi|300903293|ref|ZP_07121221.1| ATP-dependent protease La [Escherichia coli MS 84-1]
gi|300918178|ref|ZP_07134785.1| ATP-dependent protease La [Escherichia coli MS 115-1]
gi|300924166|ref|ZP_07140158.1| ATP-dependent protease La [Escherichia coli MS 182-1]
gi|300930258|ref|ZP_07145671.1| ATP-dependent protease La [Escherichia coli MS 187-1]
gi|300937056|ref|ZP_07151922.1| ATP-dependent protease La [Escherichia coli MS 21-1]
gi|300947908|ref|ZP_07162056.1| ATP-dependent protease La [Escherichia coli MS 116-1]
gi|300958007|ref|ZP_07170171.1| ATP-dependent protease La [Escherichia coli MS 175-1]
gi|300988006|ref|ZP_07178486.1| ATP-dependent protease La [Escherichia coli MS 45-1]
gi|300997372|ref|ZP_07181712.1| ATP-dependent protease La [Escherichia coli MS 200-1]
gi|301022567|ref|ZP_07186439.1| ATP-dependent protease La [Escherichia coli MS 69-1]
gi|301025665|ref|ZP_07189183.1| ATP-dependent protease La [Escherichia coli MS 196-1]
gi|301049646|ref|ZP_07196595.1| ATP-dependent protease La [Escherichia coli MS 185-1]
gi|301301590|ref|ZP_07207725.1| ATP-dependent protease La [Escherichia coli MS 124-1]
gi|301330694|ref|ZP_07223296.1| ATP-dependent protease La [Escherichia coli MS 78-1]
gi|301647365|ref|ZP_07247177.1| ATP-dependent protease La [Escherichia coli MS 146-1]
gi|306813093|ref|ZP_07447286.1| DNA-binding ATP-dependent protease La [Escherichia coli NC101]
gi|307312183|ref|ZP_07591819.1| ATP-dependent protease La [Escherichia coli W]
gi|309787031|ref|ZP_07681643.1| ATP-dependent protease La [Shigella dysenteriae 1617]
gi|309794828|ref|ZP_07689249.1| ATP-dependent protease La [Escherichia coli MS 145-7]
gi|312964536|ref|ZP_07778792.1| ATP-dependent protease La [Escherichia coli 2362-75]
gi|378714155|ref|YP_005279048.1| ATP-dependent protease La [Escherichia coli KO11FL]
gi|383177029|ref|YP_005455034.1| DNA-binding ATP-dependent protease La [Shigella sonnei 53G]
gi|386279464|ref|ZP_10057145.1| lon protease [Escherichia sp. 4_1_40B]
gi|386596685|ref|YP_006093085.1| ATP-dependent protease La [Escherichia coli DH1]
gi|386598156|ref|YP_006099662.1| ATP-dependent protease La [Escherichia coli IHE3034]
gi|386605607|ref|YP_006111907.1| DNA-binding ATP-dependent protease La [Escherichia coli UM146]
gi|386607802|ref|YP_006123288.1| DNA-binding ATP-dependent protease La [Escherichia coli W]
gi|386612634|ref|YP_006132300.1| DNA-binding ATP-dependent protease [Escherichia coli UMNK88]
gi|386617933|ref|YP_006137513.1| DNA-binding ATP-dependent protease La [Escherichia coli NA114]
gi|386622811|ref|YP_006142539.1| DNA-binding ATP-dependent protease La [Escherichia coli O7:K1 str.
CE10]
gi|386637854|ref|YP_006104652.1| DNA-binding ATP-dependent protease La [Escherichia coli ABU 83972]
gi|386702754|ref|YP_006166591.1| DNA-binding ATP-dependent protease La [Escherichia coli KO11FL]
gi|386703658|ref|YP_006167505.1| ATP-dependent protease La [Escherichia coli P12b]
gi|386708242|ref|YP_006171963.1| DNA-binding ATP-dependent protease La [Escherichia coli W]
gi|387505457|ref|YP_006157713.1| DNA-binding ATP-dependent protease La [Escherichia coli O55:H7 str.
RM12579]
gi|387605949|ref|YP_006094805.1| ATP-dependent protease La [Escherichia coli 042]
gi|387615756|ref|YP_006118778.1| DNA-binding ATP-dependent protease La [Escherichia coli O83:H1 str.
NRG 857C]
gi|387620198|ref|YP_006127825.1| DNA-binding ATP-dependent protease La [Escherichia coli DH1]
gi|387828453|ref|YP_003348390.1| ATP-dependent protease [Escherichia coli SE15]
gi|388476545|ref|YP_488731.1| DNA-binding ATP-dependent protease La [Escherichia coli str. K-12
substr. W3110]
gi|404373761|ref|ZP_10978996.1| lon protease [Escherichia sp. 1_1_43]
gi|407467889|ref|YP_006785669.1| DNA-binding ATP-dependent protease La [Escherichia coli O104:H4
str. 2009EL-2071]
gi|410483933|ref|YP_006771479.1| DNA-binding ATP-dependent protease La [Escherichia coli O104:H4
str. 2009EL-2050]
gi|414574652|ref|ZP_11431861.1| ATP-dependent protease La [Shigella sonnei 3233-85]
gi|415777140|ref|ZP_11488392.1| ATP-dependent protease La [Escherichia coli 3431]
gi|415790318|ref|ZP_11494960.1| ATP-dependent protease La [Escherichia coli EPECa14]
gi|415801140|ref|ZP_11499541.1| ATP-dependent protease La [Escherichia coli E128010]
gi|415821036|ref|ZP_11510050.1| ATP-dependent protease La [Escherichia coli OK1180]
gi|415828315|ref|ZP_11514912.1| ATP-dependent protease La [Escherichia coli OK1357]
gi|415836285|ref|ZP_11518697.1| ATP-dependent protease La [Escherichia coli RN587/1]
gi|415852353|ref|ZP_11528729.1| ATP-dependent protease La [Shigella sonnei 53G]
gi|415862717|ref|ZP_11536157.1| ATP-dependent protease La [Escherichia coli MS 85-1]
gi|415873840|ref|ZP_11541013.1| ATP-dependent protease La [Escherichia coli MS 79-10]
gi|416334477|ref|ZP_11671385.1| DNA-binding ATP-dependent protease La [Escherichia coli WV_060327]
gi|416341383|ref|ZP_11676006.1| DNA-binding ATP-dependent protease La [Escherichia coli EC4100B]
gi|416791660|ref|ZP_11881793.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H-
str. 493-89]
gi|416803303|ref|ZP_11886654.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H-
str. H 2687]
gi|416822835|ref|ZP_11895162.1| DNA-binding ATP-dependent protease La [Escherichia coli O55:H7 str.
USDA 5905]
gi|416835009|ref|ZP_11901257.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. LSU-61]
gi|416895869|ref|ZP_11925753.1| ATP-dependent protease La [Escherichia coli STEC_7v]
gi|417120980|ref|ZP_11970434.1| endopeptidase La [Escherichia coli 97.0246]
gi|417135548|ref|ZP_11980333.1| endopeptidase La [Escherichia coli 5.0588]
gi|417144227|ref|ZP_11986033.1| endopeptidase La [Escherichia coli 1.2264]
gi|417153120|ref|ZP_11991911.1| endopeptidase La [Escherichia coli 96.0497]
gi|417168579|ref|ZP_12001030.1| endopeptidase La [Escherichia coli 99.0741]
gi|417175709|ref|ZP_12005505.1| endopeptidase La [Escherichia coli 3.2608]
gi|417179300|ref|ZP_12007400.1| endopeptidase La [Escherichia coli 93.0624]
gi|417218222|ref|ZP_12023824.1| endopeptidase La [Escherichia coli JB1-95]
gi|417225349|ref|ZP_12028640.1| endopeptidase La [Escherichia coli 96.154]
gi|417229537|ref|ZP_12031123.1| endopeptidase La [Escherichia coli 5.0959]
gi|417246644|ref|ZP_12039745.1| endopeptidase La [Escherichia coli 9.0111]
gi|417253470|ref|ZP_12045229.1| endopeptidase La [Escherichia coli 4.0967]
gi|417260819|ref|ZP_12048317.1| endopeptidase La [Escherichia coli 2.3916]
gi|417268370|ref|ZP_12055731.1| endopeptidase La [Escherichia coli 3.3884]
gi|417270491|ref|ZP_12057844.1| endopeptidase La [Escherichia coli 2.4168]
gi|417275295|ref|ZP_12062632.1| endopeptidase La [Escherichia coli 3.2303]
gi|417284597|ref|ZP_12071892.1| endopeptidase La [Escherichia coli 3003]
gi|417293265|ref|ZP_12080545.1| endopeptidase La [Escherichia coli B41]
gi|417299237|ref|ZP_12086467.1| endopeptidase La [Escherichia coli 900105 (10e)]
gi|417306941|ref|ZP_12093821.1| Lon protease [Escherichia coli PCN033]
gi|417579663|ref|ZP_12230485.1| ATP-dependent protease La [Escherichia coli STEC_B2F1]
gi|417585234|ref|ZP_12236014.1| ATP-dependent protease La [Escherichia coli STEC_C165-02]
gi|417590122|ref|ZP_12240842.1| ATP-dependent protease La [Escherichia coli 2534-86]
gi|417595364|ref|ZP_12246034.1| ATP-dependent protease La [Escherichia coli 3030-1]
gi|417611472|ref|ZP_12261946.1| ATP-dependent protease La [Escherichia coli STEC_EH250]
gi|417616828|ref|ZP_12267262.1| ATP-dependent protease La [Escherichia coli G58-1]
gi|417621708|ref|ZP_12272037.1| ATP-dependent protease La [Escherichia coli STEC_H.1.8]
gi|417627382|ref|ZP_12277629.1| ATP-dependent protease La [Escherichia coli STEC_MHI813]
gi|417632924|ref|ZP_12283145.1| ATP-dependent protease La [Escherichia coli STEC_S1191]
gi|417637739|ref|ZP_12287914.1| ATP-dependent protease La [Escherichia coli TX1999]
gi|417661015|ref|ZP_12310596.1| ATP-dependent protease La Type 1 [Escherichia coli AA86]
gi|417665525|ref|ZP_12315092.1| ATP-dependent protease La [Escherichia coli STEC_O31]
gi|417705977|ref|ZP_12355042.1| ATP-dependent protease La [Shigella flexneri VA-6]
gi|417710996|ref|ZP_12360003.1| ATP-dependent protease La [Shigella flexneri K-272]
gi|417754235|ref|ZP_12402330.1| ATP-dependent protease La [Escherichia coli DEC2B]
gi|417831547|ref|ZP_12478069.1| DNA-binding ATP-dependent protease La [Escherichia coli O104:H4
str. 01-09591]
gi|417945741|ref|ZP_12588970.1| DNA-binding ATP-dependent protease La [Escherichia coli XH140A]
gi|417976587|ref|ZP_12617379.1| DNA-binding ATP-dependent protease La [Escherichia coli XH001]
gi|418042556|ref|ZP_12680749.1| DNA-binding ATP-dependent protease La [Escherichia coli W26]
gi|418262479|ref|ZP_12883858.1| ATP-dependent protease La [Shigella sonnei str. Moseley]
gi|418301290|ref|ZP_12913084.1| ATP-dependent protease La [Escherichia coli UMNF18]
gi|418941049|ref|ZP_13494389.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H43
str. T22]
gi|418959266|ref|ZP_13511165.1| DNA-binding ATP-dependent protease La [Escherichia coli J53]
gi|418995646|ref|ZP_13543260.1| ATP-dependent protease La [Escherichia coli DEC1A]
gi|419000596|ref|ZP_13548158.1| ATP-dependent protease La [Escherichia coli DEC1B]
gi|419006130|ref|ZP_13553586.1| ATP-dependent protease La [Escherichia coli DEC1C]
gi|419016901|ref|ZP_13564227.1| ATP-dependent protease La [Escherichia coli DEC1E]
gi|419027403|ref|ZP_13574603.1| ATP-dependent protease La [Escherichia coli DEC2C]
gi|419033507|ref|ZP_13580605.1| ATP-dependent protease La [Escherichia coli DEC2D]
gi|419073414|ref|ZP_13618987.1| ATP-dependent protease La [Escherichia coli DEC3F]
gi|419124400|ref|ZP_13669304.1| ATP-dependent protease La [Escherichia coli DEC5C]
gi|419130100|ref|ZP_13674953.1| ATP-dependent protease La [Escherichia coli DEC5D]
gi|419134858|ref|ZP_13679667.1| ATP-dependent protease La [Escherichia coli DEC5E]
gi|419140970|ref|ZP_13685727.1| ATP-dependent protease La [Escherichia coli DEC6A]
gi|419146432|ref|ZP_13691128.1| ATP-dependent protease La [Escherichia coli DEC6B]
gi|419152272|ref|ZP_13696860.1| ATP-dependent protease La [Escherichia coli DEC6C]
gi|419157780|ref|ZP_13702306.1| ATP-dependent protease La [Escherichia coli DEC6D]
gi|419162712|ref|ZP_13707192.1| ATP-dependent protease La [Escherichia coli DEC6E]
gi|419168435|ref|ZP_13712833.1| ATP-dependent protease La [Escherichia coli DEC7A]
gi|419173751|ref|ZP_13717607.1| ATP-dependent protease La [Escherichia coli DEC7B]
gi|419179428|ref|ZP_13723053.1| ATP-dependent protease La [Escherichia coli DEC7C]
gi|419184986|ref|ZP_13728508.1| ATP-dependent protease La [Escherichia coli DEC7D]
gi|419190234|ref|ZP_13733702.1| ATP-dependent protease La [Escherichia coli DEC7E]
gi|419195536|ref|ZP_13738944.1| ATP-dependent protease La [Escherichia coli DEC8A]
gi|419201553|ref|ZP_13744781.1| ATP-dependent protease La [Escherichia coli DEC8B]
gi|419207440|ref|ZP_13750568.1| ATP-dependent protease La [Escherichia coli DEC8C]
gi|419213880|ref|ZP_13756912.1| ATP-dependent protease La [Escherichia coli DEC8D]
gi|419219704|ref|ZP_13762661.1| ATP-dependent protease La [Escherichia coli DEC8E]
gi|419225168|ref|ZP_13768058.1| ATP-dependent protease La [Escherichia coli DEC9A]
gi|419236287|ref|ZP_13779038.1| ATP-dependent protease La [Escherichia coli DEC9C]
gi|419241881|ref|ZP_13784531.1| ATP-dependent protease La [Escherichia coli DEC9D]
gi|419247290|ref|ZP_13789905.1| ATP-dependent protease La [Escherichia coli DEC9E]
gi|419253066|ref|ZP_13795616.1| ATP-dependent protease La [Escherichia coli DEC10A]
gi|419259075|ref|ZP_13801535.1| ATP-dependent protease La [Escherichia coli DEC10B]
gi|419264894|ref|ZP_13807281.1| ATP-dependent protease La [Escherichia coli DEC10C]
gi|419282163|ref|ZP_13824385.1| ATP-dependent protease La [Escherichia coli DEC10F]
gi|419287904|ref|ZP_13830022.1| ATP-dependent protease La [Escherichia coli DEC11A]
gi|419293243|ref|ZP_13835304.1| ATP-dependent protease La [Escherichia coli DEC11B]
gi|419298683|ref|ZP_13840701.1| ATP-dependent protease La [Escherichia coli DEC11C]
gi|419304967|ref|ZP_13846881.1| ATP-dependent protease La [Escherichia coli DEC11D]
gi|419309992|ref|ZP_13851869.1| ATP-dependent protease La [Escherichia coli DEC11E]
gi|419315311|ref|ZP_13857139.1| ATP-dependent protease La [Escherichia coli DEC12A]
gi|419321087|ref|ZP_13862830.1| ATP-dependent protease La [Escherichia coli DEC12B]
gi|419327334|ref|ZP_13868967.1| ATP-dependent protease La [Escherichia coli DEC12C]
gi|419332744|ref|ZP_13874308.1| ATP-dependent protease La [Escherichia coli DEC12D]
gi|419339680|ref|ZP_13881157.1| ATP-dependent protease La [Escherichia coli DEC12E]
gi|419344087|ref|ZP_13885471.1| ATP-dependent protease La [Escherichia coli DEC13A]
gi|419348520|ref|ZP_13889873.1| ATP-dependent protease La [Escherichia coli DEC13B]
gi|419368723|ref|ZP_13909852.1| ATP-dependent protease La [Escherichia coli DEC14A]
gi|419373908|ref|ZP_13914964.1| ATP-dependent protease La [Escherichia coli DEC14B]
gi|419379326|ref|ZP_13920307.1| ATP-dependent protease La [Escherichia coli DEC14C]
gi|419384582|ref|ZP_13925486.1| ATP-dependent protease La [Escherichia coli DEC14D]
gi|419389856|ref|ZP_13930695.1| ATP-dependent protease La [Escherichia coli DEC15A]
gi|419395028|ref|ZP_13935813.1| ATP-dependent protease La [Escherichia coli DEC15B]
gi|419400379|ref|ZP_13941113.1| ATP-dependent protease La [Escherichia coli DEC15C]
gi|419405551|ref|ZP_13946255.1| ATP-dependent protease La [Escherichia coli DEC15D]
gi|419411045|ref|ZP_13951718.1| ATP-dependent protease La [Escherichia coli DEC15E]
gi|419699355|ref|ZP_14226971.1| DNA-binding ATP-dependent protease La [Escherichia coli SCI-07]
gi|419805363|ref|ZP_14330501.1| DNA-binding ATP-dependent protease La [Escherichia coli AI27]
gi|419811816|ref|ZP_14336688.1| DNA-binding ATP-dependent protease La [Escherichia coli O32:H37
str. P4]
gi|419862466|ref|ZP_14385071.1| DNA-binding ATP-dependent protease La [Escherichia coli O103:H25
str. CVM9340]
gi|419867896|ref|ZP_14390210.1| DNA-binding ATP-dependent protease La [Escherichia coli O103:H2
str. CVM9450]
gi|419876971|ref|ZP_14398630.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H11
str. CVM9534]
gi|419882602|ref|ZP_14403812.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H11
str. CVM9545]
gi|419888439|ref|ZP_14408946.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H8
str. CVM9570]
gi|419893034|ref|ZP_14413040.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H8
str. CVM9574]
gi|419900591|ref|ZP_14420017.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CVM9942]
gi|419906388|ref|ZP_14425300.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CVM10026]
gi|419915475|ref|ZP_14433840.1| DNA-binding ATP-dependent protease La [Escherichia coli KD1]
gi|419916842|ref|ZP_14435126.1| DNA-binding ATP-dependent protease La [Escherichia coli KD2]
gi|419923187|ref|ZP_14441149.1| DNA-binding ATP-dependent protease La [Escherichia coli 541-15]
gi|419928057|ref|ZP_14445777.1| DNA-binding ATP-dependent protease La [Escherichia coli 541-1]
gi|419937105|ref|ZP_14454021.1| DNA-binding ATP-dependent protease La [Escherichia coli 576-1]
gi|419941389|ref|ZP_14458078.1| DNA-binding ATP-dependent protease La [Escherichia coli 75]
gi|419948922|ref|ZP_14465185.1| DNA-binding ATP-dependent protease La [Escherichia coli CUMT8]
gi|420088258|ref|ZP_14600162.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H8
str. CVM9602]
gi|420092932|ref|ZP_14604622.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H8
str. CVM9634]
gi|420103062|ref|ZP_14613976.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H11
str. CVM9455]
gi|420109690|ref|ZP_14619790.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H11
str. CVM9553]
gi|420119642|ref|ZP_14628907.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CVM10030]
gi|420125721|ref|ZP_14634512.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CVM10224]
gi|420130830|ref|ZP_14639310.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CVM9952]
gi|420278567|ref|ZP_14780834.1| ATP-dependent protease La [Escherichia coli TW06591]
gi|420329593|ref|ZP_14831298.1| ATP-dependent protease La [Shigella flexneri K-1770]
gi|420357065|ref|ZP_14858081.1| ATP-dependent protease La [Shigella sonnei 3226-85]
gi|420361889|ref|ZP_14862815.1| ATP-dependent protease La [Shigella sonnei 4822-66]
gi|420389779|ref|ZP_14889052.1| ATP-dependent protease La [Escherichia coli EPEC C342-62]
gi|422355328|ref|ZP_16436044.1| ATP-dependent protease La [Escherichia coli MS 117-3]
gi|422356281|ref|ZP_16436970.1| ATP-dependent protease La [Escherichia coli MS 110-3]
gi|422363026|ref|ZP_16443574.1| ATP-dependent protease La [Escherichia coli MS 153-1]
gi|422368706|ref|ZP_16449111.1| ATP-dependent protease La [Escherichia coli MS 16-3]
gi|422378073|ref|ZP_16458296.1| ATP-dependent protease La [Escherichia coli MS 60-1]
gi|422378680|ref|ZP_16458887.1| ATP-dependent protease La [Escherichia coli MS 57-2]
gi|422753092|ref|ZP_16806919.1| ATP-dependent protease [Escherichia coli H263]
gi|422763234|ref|ZP_16816989.1| ATP-dependent protease [Escherichia coli E1167]
gi|422764970|ref|ZP_16818697.1| ATP-dependent protease La [Escherichia coli E1520]
gi|422782768|ref|ZP_16835553.1| ATP-dependent protease [Escherichia coli TW10509]
gi|422785049|ref|ZP_16837788.1| ATP-dependent protease [Escherichia coli H489]
gi|422791247|ref|ZP_16843950.1| ATP-dependent protease [Escherichia coli TA007]
gi|422816453|ref|ZP_16864668.1| lon protease [Escherichia coli M919]
gi|422830600|ref|ZP_16878756.1| lon protease [Escherichia coli B093]
gi|422835145|ref|ZP_16883202.1| lon protease [Escherichia coli E101]
gi|422838961|ref|ZP_16886933.1| lon protease [Escherichia coli H397]
gi|422960326|ref|ZP_16971774.1| lon protease [Escherichia coli H494]
gi|422974760|ref|ZP_16976461.1| lon protease [Escherichia coli TA124]
gi|422998305|ref|ZP_16989061.1| lon protease [Escherichia coli O104:H4 str. 09-7901]
gi|423006766|ref|ZP_16997509.1| lon protease [Escherichia coli O104:H4 str. 04-8351]
gi|423710210|ref|ZP_17684560.1| lon protease [Escherichia coli B799]
gi|424747925|ref|ZP_18176077.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CFSAN001629]
gi|424766680|ref|ZP_18194025.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H11
str. CFSAN001630]
gi|424768160|ref|ZP_18195452.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H8
str. CFSAN001632]
gi|425113768|ref|ZP_18515606.1| ATP-dependent protease La [Escherichia coli 8.0566]
gi|425118534|ref|ZP_18520269.1| ATP-dependent protease La [Escherichia coli 8.0569]
gi|425246965|ref|ZP_18640189.1| ATP-dependent protease La [Escherichia coli 5905]
gi|425265105|ref|ZP_18657043.1| ATP-dependent protease La [Escherichia coli 5412]
gi|425271135|ref|ZP_18662649.1| ATP-dependent protease La [Escherichia coli TW15901]
gi|425276314|ref|ZP_18667658.1| ATP-dependent protease La [Escherichia coli ARS4.2123]
gi|425281807|ref|ZP_18672928.1| ATP-dependent protease La [Escherichia coli TW00353]
gi|425286997|ref|ZP_18677932.1| ATP-dependent protease La [Escherichia coli 3006]
gi|425298638|ref|ZP_18688688.1| ATP-dependent protease La [Escherichia coli 07798]
gi|425303946|ref|ZP_18693735.1| ATP-dependent protease La [Escherichia coli N1]
gi|425377260|ref|ZP_18761662.1| ATP-dependent protease La [Escherichia coli EC1865]
gi|425421052|ref|ZP_18802283.1| ATP-dependent protease La [Escherichia coli 0.1288]
gi|427803506|ref|ZP_18970573.1| DNA-binding, ATP-dependent protease La [Escherichia coli chi7122]
gi|427808124|ref|ZP_18975189.1| DNA-binding, ATP-dependent protease La; heat shock K-protein
[Escherichia coli]
gi|429722635|ref|ZP_19257533.1| lon protease [Escherichia coli O104:H4 str. Ec11-9450]
gi|429907006|ref|ZP_19372975.1| lon protease [Escherichia coli O104:H4 str. Ec11-9990]
gi|429911204|ref|ZP_19377160.1| lon protease [Escherichia coli O104:H4 str. Ec11-9941]
gi|429949359|ref|ZP_19415207.1| lon protease [Escherichia coli O104:H4 str. Ec12-0465]
gi|429957643|ref|ZP_19423472.1| lon protease [Escherichia coli O104:H4 str. Ec12-0466]
gi|432352102|ref|ZP_19595411.1| lon protease [Escherichia coli KTE2]
gi|432371213|ref|ZP_19614277.1| lon protease [Escherichia coli KTE11]
gi|432375522|ref|ZP_19618536.1| lon protease [Escherichia coli KTE12]
gi|432380067|ref|ZP_19623031.1| lon protease [Escherichia coli KTE15]
gi|432385896|ref|ZP_19628795.1| lon protease [Escherichia coli KTE16]
gi|432390367|ref|ZP_19633231.1| lon protease [Escherichia coli KTE21]
gi|432396313|ref|ZP_19639105.1| lon protease [Escherichia coli KTE25]
gi|432400551|ref|ZP_19643311.1| lon protease [Escherichia coli KTE26]
gi|432405309|ref|ZP_19648032.1| lon protease [Escherichia coli KTE28]
gi|432410508|ref|ZP_19653191.1| lon protease [Escherichia coli KTE39]
gi|432415391|ref|ZP_19658022.1| lon protease [Escherichia coli KTE44]
gi|432420549|ref|ZP_19663107.1| lon protease [Escherichia coli KTE178]
gi|432429588|ref|ZP_19672048.1| lon protease [Escherichia coli KTE181]
gi|432430555|ref|ZP_19673000.1| lon protease [Escherichia coli KTE187]
gi|432435084|ref|ZP_19677485.1| lon protease [Escherichia coli KTE188]
gi|432453233|ref|ZP_19695473.1| lon protease [Escherichia coli KTE193]
gi|432455367|ref|ZP_19697569.1| lon protease [Escherichia coli KTE201]
gi|432459410|ref|ZP_19701574.1| lon protease [Escherichia coli KTE204]
gi|432464451|ref|ZP_19706559.1| lon protease [Escherichia coli KTE205]
gi|432469872|ref|ZP_19711925.1| lon protease [Escherichia coli KTE206]
gi|432474459|ref|ZP_19716472.1| lon protease [Escherichia coli KTE208]
gi|432479800|ref|ZP_19721765.1| lon protease [Escherichia coli KTE210]
gi|432484167|ref|ZP_19726091.1| lon protease [Escherichia coli KTE212]
gi|432492735|ref|ZP_19734574.1| lon protease [Escherichia coli KTE213]
gi|432494308|ref|ZP_19736126.1| lon protease [Escherichia coli KTE214]
gi|432498683|ref|ZP_19740463.1| lon protease [Escherichia coli KTE216]
gi|432503147|ref|ZP_19744884.1| lon protease [Escherichia coli KTE220]
gi|432521076|ref|ZP_19758241.1| lon protease [Escherichia coli KTE228]
gi|432522592|ref|ZP_19759731.1| lon protease [Escherichia coli KTE230]
gi|432529807|ref|ZP_19766851.1| lon protease [Escherichia coli KTE233]
gi|432532628|ref|ZP_19769628.1| lon protease [Escherichia coli KTE234]
gi|432541293|ref|ZP_19778168.1| lon protease [Escherichia coli KTE235]
gi|432552447|ref|ZP_19789179.1| lon protease [Escherichia coli KTE47]
gi|432557456|ref|ZP_19794149.1| lon protease [Escherichia coli KTE49]
gi|432562349|ref|ZP_19798976.1| lon protease [Escherichia coli KTE51]
gi|432567278|ref|ZP_19803805.1| lon protease [Escherichia coli KTE53]
gi|432572434|ref|ZP_19808925.1| lon protease [Escherichia coli KTE55]
gi|432579116|ref|ZP_19815550.1| lon protease [Escherichia coli KTE56]
gi|432582550|ref|ZP_19818960.1| lon protease [Escherichia coli KTE57]
gi|432586738|ref|ZP_19823110.1| lon protease [Escherichia coli KTE58]
gi|432591558|ref|ZP_19827887.1| lon protease [Escherichia coli KTE60]
gi|432600956|ref|ZP_19837211.1| lon protease [Escherichia coli KTE66]
gi|432606324|ref|ZP_19842520.1| lon protease [Escherichia coli KTE67]
gi|432610173|ref|ZP_19846346.1| lon protease [Escherichia coli KTE72]
gi|432615213|ref|ZP_19851348.1| lon protease [Escherichia coli KTE75]
gi|432620542|ref|ZP_19856588.1| lon protease [Escherichia coli KTE76]
gi|432626023|ref|ZP_19862008.1| lon protease [Escherichia coli KTE77]
gi|432630009|ref|ZP_19865959.1| lon protease [Escherichia coli KTE80]
gi|432635753|ref|ZP_19871639.1| lon protease [Escherichia coli KTE81]
gi|432639558|ref|ZP_19875403.1| lon protease [Escherichia coli KTE83]
gi|432644874|ref|ZP_19880677.1| lon protease [Escherichia coli KTE86]
gi|432649967|ref|ZP_19885729.1| lon protease [Escherichia coli KTE87]
gi|432654449|ref|ZP_19890168.1| lon protease [Escherichia coli KTE93]
gi|432659681|ref|ZP_19895342.1| lon protease [Escherichia coli KTE111]
gi|432664627|ref|ZP_19900223.1| lon protease [Escherichia coli KTE116]
gi|432669371|ref|ZP_19904920.1| lon protease [Escherichia coli KTE119]
gi|432678034|ref|ZP_19913460.1| lon protease [Escherichia coli KTE142]
gi|432678861|ref|ZP_19914264.1| lon protease [Escherichia coli KTE143]
gi|432684272|ref|ZP_19919591.1| lon protease [Escherichia coli KTE156]
gi|432690329|ref|ZP_19925575.1| lon protease [Escherichia coli KTE161]
gi|432693223|ref|ZP_19928438.1| lon protease [Escherichia coli KTE162]
gi|432703011|ref|ZP_19938137.1| lon protease [Escherichia coli KTE171]
gi|432709270|ref|ZP_19944339.1| lon protease [Escherichia coli KTE6]
gi|432712160|ref|ZP_19947212.1| lon protease [Escherichia coli KTE8]
gi|432717451|ref|ZP_19952453.1| lon protease [Escherichia coli KTE9]
gi|432722002|ref|ZP_19956929.1| lon protease [Escherichia coli KTE17]
gi|432726548|ref|ZP_19961431.1| lon protease [Escherichia coli KTE18]
gi|432731164|ref|ZP_19966003.1| lon protease [Escherichia coli KTE45]
gi|432735965|ref|ZP_19970741.1| lon protease [Escherichia coli KTE42]
gi|432740235|ref|ZP_19974957.1| lon protease [Escherichia coli KTE23]
gi|432744376|ref|ZP_19979081.1| lon protease [Escherichia coli KTE43]
gi|432748895|ref|ZP_19983518.1| lon protease [Escherichia coli KTE29]
gi|432753236|ref|ZP_19987804.1| lon protease [Escherichia coli KTE22]
gi|432758224|ref|ZP_19992747.1| lon protease [Escherichia coli KTE46]
gi|432763730|ref|ZP_19998182.1| lon protease [Escherichia coli KTE48]
gi|432769240|ref|ZP_20003613.1| lon protease [Escherichia coli KTE50]
gi|432773619|ref|ZP_20007909.1| lon protease [Escherichia coli KTE54]
gi|432777291|ref|ZP_20011545.1| lon protease [Escherichia coli KTE59]
gi|432782347|ref|ZP_20016533.1| lon protease [Escherichia coli KTE63]
gi|432786087|ref|ZP_20020255.1| lon protease [Escherichia coli KTE65]
gi|432791688|ref|ZP_20025782.1| lon protease [Escherichia coli KTE78]
gi|432797655|ref|ZP_20031683.1| lon protease [Escherichia coli KTE79]
gi|432800722|ref|ZP_20034712.1| lon protease [Escherichia coli KTE84]
gi|432804520|ref|ZP_20038466.1| lon protease [Escherichia coli KTE91]
gi|432812551|ref|ZP_20046400.1| lon protease [Escherichia coli KTE101]
gi|432813935|ref|ZP_20047746.1| lon protease [Escherichia coli KTE115]
gi|432819758|ref|ZP_20053472.1| lon protease [Escherichia coli KTE118]
gi|432825887|ref|ZP_20059544.1| lon protease [Escherichia coli KTE123]
gi|432830427|ref|ZP_20064036.1| lon protease [Escherichia coli KTE135]
gi|432833495|ref|ZP_20067043.1| lon protease [Escherichia coli KTE136]
gi|432837988|ref|ZP_20071481.1| lon protease [Escherichia coli KTE140]
gi|432842726|ref|ZP_20076147.1| lon protease [Escherichia coli KTE141]
gi|432848217|ref|ZP_20080089.1| lon protease [Escherichia coli KTE144]
gi|432859095|ref|ZP_20085269.1| lon protease [Escherichia coli KTE146]
gi|432873101|ref|ZP_20092799.1| lon protease [Escherichia coli KTE147]
gi|432879931|ref|ZP_20096751.1| lon protease [Escherichia coli KTE154]
gi|432884405|ref|ZP_20099361.1| lon protease [Escherichia coli KTE158]
gi|432893055|ref|ZP_20105160.1| lon protease [Escherichia coli KTE165]
gi|432897226|ref|ZP_20108222.1| lon protease [Escherichia coli KTE192]
gi|432902772|ref|ZP_20112452.1| lon protease [Escherichia coli KTE194]
gi|432910125|ref|ZP_20117252.1| lon protease [Escherichia coli KTE190]
gi|432917571|ref|ZP_20122102.1| lon protease [Escherichia coli KTE173]
gi|432924876|ref|ZP_20127015.1| lon protease [Escherichia coli KTE175]
gi|432932776|ref|ZP_20132630.1| lon protease [Escherichia coli KTE184]
gi|432942312|ref|ZP_20139654.1| lon protease [Escherichia coli KTE183]
gi|432945105|ref|ZP_20141400.1| lon protease [Escherichia coli KTE196]
gi|432953572|ref|ZP_20145871.1| lon protease [Escherichia coli KTE197]
gi|432959823|ref|ZP_20150109.1| lon protease [Escherichia coli KTE202]
gi|432966550|ref|ZP_20155470.1| lon protease [Escherichia coli KTE203]
gi|432970616|ref|ZP_20159494.1| lon protease [Escherichia coli KTE207]
gi|432977161|ref|ZP_20165986.1| lon protease [Escherichia coli KTE209]
gi|432979943|ref|ZP_20168724.1| lon protease [Escherichia coli KTE211]
gi|432984131|ref|ZP_20172870.1| lon protease [Escherichia coli KTE215]
gi|432989544|ref|ZP_20178214.1| lon protease [Escherichia coli KTE217]
gi|432994234|ref|ZP_20182851.1| lon protease [Escherichia coli KTE218]
gi|432998653|ref|ZP_20187193.1| lon protease [Escherichia coli KTE223]
gi|433003965|ref|ZP_20192403.1| lon protease [Escherichia coli KTE227]
gi|433017395|ref|ZP_20205666.1| lon protease [Escherichia coli KTE105]
gi|433027481|ref|ZP_20215357.1| lon protease [Escherichia coli KTE109]
gi|433031875|ref|ZP_20219690.1| lon protease [Escherichia coli KTE112]
gi|433037375|ref|ZP_20224996.1| lon protease [Escherichia coli KTE113]
gi|433041919|ref|ZP_20229454.1| lon protease [Escherichia coli KTE117]
gi|433046510|ref|ZP_20233942.1| lon protease [Escherichia coli KTE120]
gi|433051738|ref|ZP_20238976.1| lon protease [Escherichia coli KTE122]
gi|433056777|ref|ZP_20243864.1| lon protease [Escherichia coli KTE124]
gi|433061656|ref|ZP_20248622.1| lon protease [Escherichia coli KTE125]
gi|433066647|ref|ZP_20253491.1| lon protease [Escherichia coli KTE128]
gi|433071488|ref|ZP_20258190.1| lon protease [Escherichia coli KTE129]
gi|433076637|ref|ZP_20263203.1| lon protease [Escherichia coli KTE131]
gi|433081386|ref|ZP_20267861.1| lon protease [Escherichia coli KTE133]
gi|433086043|ref|ZP_20272447.1| lon protease [Escherichia coli KTE137]
gi|433090763|ref|ZP_20277071.1| lon protease [Escherichia coli KTE138]
gi|433095306|ref|ZP_20281522.1| lon protease [Escherichia coli KTE139]
gi|433099987|ref|ZP_20286099.1| lon protease [Escherichia coli KTE145]
gi|433104574|ref|ZP_20290597.1| lon protease [Escherichia coli KTE148]
gi|433109691|ref|ZP_20295571.1| lon protease [Escherichia coli KTE150]
gi|433114390|ref|ZP_20300206.1| lon protease [Escherichia coli KTE153]
gi|433118988|ref|ZP_20304702.1| lon protease [Escherichia coli KTE157]
gi|433124007|ref|ZP_20309598.1| lon protease [Escherichia coli KTE160]
gi|433128767|ref|ZP_20314247.1| lon protease [Escherichia coli KTE163]
gi|433133587|ref|ZP_20318970.1| lon protease [Escherichia coli KTE166]
gi|433138068|ref|ZP_20323355.1| lon protease [Escherichia coli KTE167]
gi|433147896|ref|ZP_20332962.1| lon protease [Escherichia coli KTE174]
gi|433152583|ref|ZP_20337553.1| lon protease [Escherichia coli KTE176]
gi|433157382|ref|ZP_20342258.1| lon protease [Escherichia coli KTE177]
gi|433167228|ref|ZP_20351904.1| lon protease [Escherichia coli KTE180]
gi|433172309|ref|ZP_20356869.1| lon protease [Escherichia coli KTE232]
gi|433176885|ref|ZP_20361352.1| lon protease [Escherichia coli KTE82]
gi|433181972|ref|ZP_20366275.1| lon protease [Escherichia coli KTE85]
gi|433187244|ref|ZP_20371373.1| lon protease [Escherichia coli KTE88]
gi|433192369|ref|ZP_20376391.1| lon protease [Escherichia coli KTE90]
gi|433197026|ref|ZP_20380955.1| lon protease [Escherichia coli KTE94]
gi|433201860|ref|ZP_20385672.1| lon protease [Escherichia coli KTE95]
gi|433206589|ref|ZP_20390290.1| lon protease [Escherichia coli KTE97]
gi|433211369|ref|ZP_20394984.1| lon protease [Escherichia coli KTE99]
gi|442590118|ref|ZP_21008902.1| ATP-dependent protease La [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442596444|ref|ZP_21014255.1| ATP-dependent protease La [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|442606708|ref|ZP_21021503.1| ATP-dependent protease La [Escherichia coli Nissle 1917]
gi|443616467|ref|YP_007380323.1| DNA-binding ATP-dependent protease La [Escherichia coli APEC O78]
gi|450185745|ref|ZP_21889215.1| DNA-binding ATP-dependent protease La [Escherichia coli SEPT362]
gi|450211063|ref|ZP_21894202.1| DNA-binding ATP-dependent protease La [Escherichia coli O08]
gi|450239656|ref|ZP_21899083.1| DNA-binding ATP-dependent protease La [Escherichia coli S17]
gi|71159411|sp|P0A9M1.1|LON_ECOL6 RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|71159412|sp|P0A9M0.1|LON_ECOLI RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|290454|gb|AAC36871.1| lon protease [Escherichia coli]
gi|1786643|gb|AAC73542.1| DNA-binding ATP-dependent protease La [Escherichia coli str. K-12
substr. MG1655]
gi|73854491|gb|AAZ87198.1| DNA-binding, ATP-dependent protease La [Shigella sonnei Ss046]
gi|85674579|dbj|BAE76219.1| DNA-binding ATP-dependent protease La [Escherichia coli str. K12
substr. W3110]
gi|110342292|gb|ABG68529.1| ATP-dependent protease La [Escherichia coli 536]
gi|157065646|gb|ABV04901.1| ATP-dependent protease La [Escherichia coli HS]
gi|157081464|gb|ABV21172.1| ATP-dependent protease La [Escherichia coli E24377A]
gi|169756116|gb|ACA78815.1| ATP-dependent protease La [Escherichia coli ATCC 8739]
gi|169887860|gb|ACB01567.1| DNA-binding ATP-dependent protease La [Escherichia coli str. K-12
substr. DH10B]
gi|170519957|gb|ACB18135.1| ATP-dependent protease La [Escherichia coli SMS-3-5]
gi|188489893|gb|EDU64996.1| ATP-dependent protease La [Escherichia coli 53638]
gi|192929146|gb|EDV82756.1| ATP-dependent protease La [Escherichia coli E22]
gi|192958990|gb|EDV89426.1| ATP-dependent protease La [Escherichia coli E110019]
gi|194423535|gb|EDX39525.1| ATP-dependent protease La [Escherichia coli 101-1]
gi|209910915|dbj|BAG75989.1| ATP-dependent protease [Escherichia coli SE11]
gi|215263592|emb|CAS07922.1| DNA-binding ATP-dependent protease La [Escherichia coli O127:H6
str. E2348/69]
gi|218350634|emb|CAU96326.1| DNA-binding ATP-dependent protease La [Escherichia coli 55989]
gi|218359774|emb|CAQ97315.1| DNA-binding ATP-dependent protease La [Escherichia coli IAI1]
gi|218368635|emb|CAR16374.1| DNA-binding ATP-dependent protease La [Escherichia coli IAI39]
gi|218430820|emb|CAR11694.1| DNA-binding ATP-dependent protease La [Escherichia coli UMN026]
gi|222032234|emb|CAP74973.1| ATP-dependent protease La [Escherichia coli LF82]
gi|238860849|gb|ACR62847.1| DNA-binding ATP-dependent protease La [Escherichia coli BW2952]
gi|242376221|emb|CAQ30912.1| DNA-binding, ATP-dependent protease La [Escherichia coli BL21(DE3)]
gi|253325614|gb|ACT30216.1| ATP-dependent protease La [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253972410|gb|ACT38081.1| DNA-binding ATP-dependent protease La [Escherichia coli B str.
REL606]
gi|253976620|gb|ACT42290.1| DNA-binding ATP-dependent protease La [Escherichia coli BL21(DE3)]
gi|257752311|dbj|BAI23813.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. 11368]
gi|257757787|dbj|BAI29284.1| DNA-binding ATP-dependent protease La [Escherichia coli O103:H2
str. 12009]
gi|257762956|dbj|BAI34451.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H-
str. 11128]
gi|260450374|gb|ACX40796.1| ATP-dependent protease La [Escherichia coli DH1]
gi|281177610|dbj|BAI53940.1| ATP-dependent protease [Escherichia coli SE15]
gi|284920249|emb|CBG33308.1| ATP-dependent protease La [Escherichia coli 042]
gi|291429413|gb|EFF02433.1| DNA-binding ATP-dependent protease La [Escherichia coli FVEC1412]
gi|291464931|gb|ADE05993.1| ATP-dependent protease [Escherichia coli]
gi|294493830|gb|ADE92586.1| ATP-dependent protease La [Escherichia coli IHE3034]
gi|298280285|gb|EFI21789.1| DNA-binding ATP-dependent protease La [Escherichia coli FVEC1302]
gi|299880019|gb|EFI88230.1| ATP-dependent protease La [Escherichia coli MS 196-1]
gi|300298583|gb|EFJ54968.1| ATP-dependent protease La [Escherichia coli MS 185-1]
gi|300304191|gb|EFJ58711.1| ATP-dependent protease La [Escherichia coli MS 200-1]
gi|300315274|gb|EFJ65058.1| ATP-dependent protease La [Escherichia coli MS 175-1]
gi|300355991|gb|EFJ71861.1| ATP-dependent protease La [Escherichia coli MS 198-1]
gi|300397448|gb|EFJ80986.1| ATP-dependent protease La [Escherichia coli MS 69-1]
gi|300404588|gb|EFJ88126.1| ATP-dependent protease La [Escherichia coli MS 84-1]
gi|300407558|gb|EFJ91096.1| ATP-dependent protease La [Escherichia coli MS 45-1]
gi|300414629|gb|EFJ97939.1| ATP-dependent protease La [Escherichia coli MS 115-1]
gi|300419619|gb|EFK02930.1| ATP-dependent protease La [Escherichia coli MS 182-1]
gi|300452508|gb|EFK16128.1| ATP-dependent protease La [Escherichia coli MS 116-1]
gi|300457887|gb|EFK21380.1| ATP-dependent protease La [Escherichia coli MS 21-1]
gi|300461830|gb|EFK25323.1| ATP-dependent protease La [Escherichia coli MS 187-1]
gi|300527100|gb|EFK48169.1| ATP-dependent protease La [Escherichia coli MS 119-7]
gi|300529120|gb|EFK50182.1| ATP-dependent protease La [Escherichia coli MS 107-1]
gi|300843087|gb|EFK70847.1| ATP-dependent protease La [Escherichia coli MS 124-1]
gi|300843355|gb|EFK71115.1| ATP-dependent protease La [Escherichia coli MS 78-1]
gi|301074510|gb|EFK89316.1| ATP-dependent protease La [Escherichia coli MS 146-1]
gi|305853856|gb|EFM54295.1| DNA-binding ATP-dependent protease La [Escherichia coli NC101]
gi|306907685|gb|EFN38187.1| ATP-dependent protease La [Escherichia coli W]
gi|307552346|gb|ADN45121.1| DNA-binding ATP-dependent protease La [Escherichia coli ABU 83972]
gi|307628091|gb|ADN72395.1| DNA-binding ATP-dependent protease La [Escherichia coli UM146]
gi|308121481|gb|EFO58743.1| ATP-dependent protease La [Escherichia coli MS 145-7]
gi|308924609|gb|EFP70104.1| ATP-dependent protease La [Shigella dysenteriae 1617]
gi|312290770|gb|EFR18647.1| ATP-dependent protease La [Escherichia coli 2362-75]
gi|312945017|gb|ADR25844.1| DNA-binding ATP-dependent protease La [Escherichia coli O83:H1 str.
NRG 857C]
gi|315059719|gb|ADT74046.1| DNA-binding ATP-dependent protease La [Escherichia coli W]
gi|315135121|dbj|BAJ42280.1| DNA-binding ATP-dependent protease La [Escherichia coli DH1]
gi|315256267|gb|EFU36235.1| ATP-dependent protease La [Escherichia coli MS 85-1]
gi|315289843|gb|EFU49233.1| ATP-dependent protease La [Escherichia coli MS 110-3]
gi|315294227|gb|EFU53578.1| ATP-dependent protease La [Escherichia coli MS 153-1]
gi|315299563|gb|EFU58811.1| ATP-dependent protease La [Escherichia coli MS 16-3]
gi|315616620|gb|EFU97237.1| ATP-dependent protease La [Escherichia coli 3431]
gi|320197087|gb|EFW71706.1| DNA-binding ATP-dependent protease La [Escherichia coli WV_060327]
gi|320201683|gb|EFW76259.1| DNA-binding ATP-dependent protease La [Escherichia coli EC4100B]
gi|320643815|gb|EFX12938.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H-
str. 493-89]
gi|320649166|gb|EFX17744.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H-
str. H 2687]
gi|320661209|gb|EFX28640.1| DNA-binding ATP-dependent protease La [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665185|gb|EFX32278.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. LSU-61]
gi|323153476|gb|EFZ39730.1| ATP-dependent protease La [Escherichia coli EPECa14]
gi|323160450|gb|EFZ46398.1| ATP-dependent protease La [Escherichia coli E128010]
gi|323164240|gb|EFZ50047.1| ATP-dependent protease La [Shigella sonnei 53G]
gi|323178292|gb|EFZ63870.1| ATP-dependent protease La [Escherichia coli OK1180]
gi|323184730|gb|EFZ70101.1| ATP-dependent protease La [Escherichia coli OK1357]
gi|323191359|gb|EFZ76622.1| ATP-dependent protease La [Escherichia coli RN587/1]
gi|323379716|gb|ADX51984.1| ATP-dependent protease La [Escherichia coli KO11FL]
gi|323938625|gb|EGB34874.1| ATP-dependent protease La [Escherichia coli E1520]
gi|323958632|gb|EGB54335.1| ATP-dependent protease [Escherichia coli H263]
gi|323963429|gb|EGB58991.1| ATP-dependent protease [Escherichia coli H489]
gi|323972293|gb|EGB67503.1| ATP-dependent protease [Escherichia coli TA007]
gi|323976076|gb|EGB71169.1| ATP-dependent protease [Escherichia coli TW10509]
gi|324010070|gb|EGB79289.1| ATP-dependent protease La [Escherichia coli MS 57-2]
gi|324010653|gb|EGB79872.1| ATP-dependent protease La [Escherichia coli MS 60-1]
gi|324016700|gb|EGB85919.1| ATP-dependent protease La [Escherichia coli MS 117-3]
gi|324116927|gb|EGC10840.1| ATP-dependent protease [Escherichia coli E1167]
gi|327254767|gb|EGE66383.1| ATP-dependent protease La [Escherichia coli STEC_7v]
gi|330910233|gb|EGH38743.1| ATP-dependent protease La Type 1 [Escherichia coli AA86]
gi|332341803|gb|AEE55137.1| DNA-binding ATP-dependent protease [Escherichia coli UMNK88]
gi|333008125|gb|EGK27600.1| ATP-dependent protease La [Shigella flexneri VA-6]
gi|333010900|gb|EGK30326.1| ATP-dependent protease La [Shigella flexneri K-272]
gi|333968434|gb|AEG35239.1| DNA-binding ATP-dependent protease La [Escherichia coli NA114]
gi|338771517|gb|EGP26257.1| Lon protease [Escherichia coli PCN033]
gi|339413388|gb|AEJ55060.1| ATP-dependent protease La [Escherichia coli UMNF18]
gi|340735699|gb|EGR64755.1| DNA-binding ATP-dependent protease La [Escherichia coli O104:H4
str. 01-09591]
gi|342362473|gb|EGU26591.1| DNA-binding ATP-dependent protease La [Escherichia coli XH140A]
gi|342930644|gb|EGU99366.1| ATP-dependent protease La [Escherichia coli MS 79-10]
gi|344193754|gb|EGV47832.1| DNA-binding ATP-dependent protease La [Escherichia coli XH001]
gi|345341459|gb|EGW73864.1| ATP-dependent protease La [Escherichia coli STEC_C165-02]
gi|345344083|gb|EGW76459.1| ATP-dependent protease La [Escherichia coli STEC_B2F1]
gi|345345295|gb|EGW77641.1| ATP-dependent protease La [Escherichia coli 2534-86]
gi|345361732|gb|EGW93890.1| ATP-dependent protease La [Escherichia coli 3030-1]
gi|345365957|gb|EGW98055.1| ATP-dependent protease La [Escherichia coli STEC_EH250]
gi|345377686|gb|EGX09617.1| ATP-dependent protease La [Escherichia coli STEC_MHI813]
gi|345381200|gb|EGX13085.1| ATP-dependent protease La [Escherichia coli G58-1]
gi|345386283|gb|EGX16118.1| ATP-dependent protease La [Escherichia coli STEC_H.1.8]
gi|345391234|gb|EGX21028.1| ATP-dependent protease La [Escherichia coli STEC_S1191]
gi|345395483|gb|EGX25227.1| ATP-dependent protease La [Escherichia coli TX1999]
gi|349736549|gb|AEQ11255.1| DNA-binding ATP-dependent protease La [Escherichia coli O7:K1 str.
CE10]
gi|354858265|gb|EHF18716.1| lon protease [Escherichia coli O104:H4 str. 04-8351]
gi|354877173|gb|EHF37533.1| lon protease [Escherichia coli O104:H4 str. 09-7901]
gi|359331199|dbj|BAL37646.1| DNA-binding ATP-dependent protease La [Escherichia coli str. K-12
substr. MDS42]
gi|371594124|gb|EHN82996.1| lon protease [Escherichia coli H494]
gi|371595520|gb|EHN84369.1| lon protease [Escherichia coli TA124]
gi|371604296|gb|EHN92925.1| lon protease [Escherichia coli B093]
gi|371611432|gb|EHN99954.1| lon protease [Escherichia coli H397]
gi|371612950|gb|EHO01453.1| lon protease [Escherichia coli E101]
gi|374357451|gb|AEZ39158.1| DNA-binding ATP-dependent protease La [Escherichia coli O55:H7 str.
RM12579]
gi|375323618|gb|EHS69323.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H43
str. T22]
gi|377849036|gb|EHU14012.1| ATP-dependent protease La [Escherichia coli DEC1A]
gi|377850931|gb|EHU15886.1| ATP-dependent protease La [Escherichia coli DEC1C]
gi|377854086|gb|EHU18976.1| ATP-dependent protease La [Escherichia coli DEC1B]
gi|377866875|gb|EHU31639.1| ATP-dependent protease La [Escherichia coli DEC1E]
gi|377879181|gb|EHU43754.1| ATP-dependent protease La [Escherichia coli DEC2B]
gi|377883926|gb|EHU48444.1| ATP-dependent protease La [Escherichia coli DEC2D]
gi|377885905|gb|EHU50396.1| ATP-dependent protease La [Escherichia coli DEC2C]
gi|377932280|gb|EHU96134.1| ATP-dependent protease La [Escherichia coli DEC3F]
gi|377981474|gb|EHV44733.1| ATP-dependent protease La [Escherichia coli DEC5D]
gi|377981638|gb|EHV44896.1| ATP-dependent protease La [Escherichia coli DEC5C]
gi|377988581|gb|EHV51759.1| ATP-dependent protease La [Escherichia coli DEC5E]
gi|378000303|gb|EHV63377.1| ATP-dependent protease La [Escherichia coli DEC6A]
gi|378001360|gb|EHV64419.1| ATP-dependent protease La [Escherichia coli DEC6B]
gi|378003856|gb|EHV66896.1| ATP-dependent protease La [Escherichia coli DEC6C]
gi|378014254|gb|EHV77160.1| ATP-dependent protease La [Escherichia coli DEC6D]
gi|378017178|gb|EHV80053.1| ATP-dependent protease La [Escherichia coli DEC6E]
gi|378018841|gb|EHV81687.1| ATP-dependent protease La [Escherichia coli DEC7A]
gi|378027889|gb|EHV90514.1| ATP-dependent protease La [Escherichia coli DEC7C]
gi|378032404|gb|EHV94985.1| ATP-dependent protease La [Escherichia coli DEC7D]
gi|378037704|gb|EHW00227.1| ATP-dependent protease La [Escherichia coli DEC7B]
gi|378042337|gb|EHW04786.1| ATP-dependent protease La [Escherichia coli DEC7E]
gi|378052757|gb|EHW15059.1| ATP-dependent protease La [Escherichia coli DEC8A]
gi|378057147|gb|EHW19382.1| ATP-dependent protease La [Escherichia coli DEC8B]
gi|378063096|gb|EHW25266.1| ATP-dependent protease La [Escherichia coli DEC8C]
gi|378069191|gb|EHW31286.1| ATP-dependent protease La [Escherichia coli DEC8D]
gi|378072758|gb|EHW34815.1| ATP-dependent protease La [Escherichia coli DEC8E]
gi|378081870|gb|EHW43818.1| ATP-dependent protease La [Escherichia coli DEC9A]
gi|378090509|gb|EHW52346.1| ATP-dependent protease La [Escherichia coli DEC9C]
gi|378095204|gb|EHW56994.1| ATP-dependent protease La [Escherichia coli DEC9D]
gi|378102388|gb|EHW64065.1| ATP-dependent protease La [Escherichia coli DEC9E]
gi|378107902|gb|EHW69520.1| ATP-dependent protease La [Escherichia coli DEC10A]
gi|378116924|gb|EHW78442.1| ATP-dependent protease La [Escherichia coli DEC10B]
gi|378119129|gb|EHW80624.1| ATP-dependent protease La [Escherichia coli DEC10C]
gi|378136538|gb|EHW97832.1| ATP-dependent protease La [Escherichia coli DEC11A]
gi|378139986|gb|EHX01216.1| ATP-dependent protease La [Escherichia coli DEC10F]
gi|378147354|gb|EHX08502.1| ATP-dependent protease La [Escherichia coli DEC11B]
gi|378153096|gb|EHX14182.1| ATP-dependent protease La [Escherichia coli DEC11D]
gi|378157259|gb|EHX18301.1| ATP-dependent protease La [Escherichia coli DEC11C]
gi|378161715|gb|EHX22691.1| ATP-dependent protease La [Escherichia coli DEC11E]
gi|378175104|gb|EHX35923.1| ATP-dependent protease La [Escherichia coli DEC12A]
gi|378175610|gb|EHX36426.1| ATP-dependent protease La [Escherichia coli DEC12B]
gi|378177104|gb|EHX37905.1| ATP-dependent protease La [Escherichia coli DEC12C]
gi|378190586|gb|EHX51170.1| ATP-dependent protease La [Escherichia coli DEC13A]
gi|378191146|gb|EHX51722.1| ATP-dependent protease La [Escherichia coli DEC12E]
gi|378191959|gb|EHX52533.1| ATP-dependent protease La [Escherichia coli DEC12D]
gi|378204182|gb|EHX64598.1| ATP-dependent protease La [Escherichia coli DEC13B]
gi|378221929|gb|EHX82171.1| ATP-dependent protease La [Escherichia coli DEC14A]
gi|378226322|gb|EHX86509.1| ATP-dependent protease La [Escherichia coli DEC14B]
gi|378234471|gb|EHX94549.1| ATP-dependent protease La [Escherichia coli DEC14C]
gi|378237160|gb|EHX97187.1| ATP-dependent protease La [Escherichia coli DEC14D]
gi|378244658|gb|EHY04600.1| ATP-dependent protease La [Escherichia coli DEC15A]
gi|378251880|gb|EHY11776.1| ATP-dependent protease La [Escherichia coli DEC15B]
gi|378252210|gb|EHY12104.1| ATP-dependent protease La [Escherichia coli DEC15C]
gi|378257940|gb|EHY17776.1| ATP-dependent protease La [Escherichia coli DEC15D]
gi|378261236|gb|EHY21031.1| ATP-dependent protease La [Escherichia coli DEC15E]
gi|380349370|gb|EIA37642.1| DNA-binding ATP-dependent protease La [Escherichia coli SCI-07]
gi|383101826|gb|AFG39335.1| ATP-dependent protease La [Escherichia coli P12b]
gi|383394281|gb|AFH19239.1| DNA-binding ATP-dependent protease La [Escherichia coli KO11FL]
gi|383403934|gb|AFH10177.1| DNA-binding ATP-dependent protease La [Escherichia coli W]
gi|383474515|gb|EID66501.1| DNA-binding ATP-dependent protease La [Escherichia coli W26]
gi|384377968|gb|EIE35860.1| DNA-binding ATP-dependent protease La [Escherichia coli J53]
gi|384471622|gb|EIE55695.1| DNA-binding ATP-dependent protease La [Escherichia coli AI27]
gi|385155299|gb|EIF17303.1| DNA-binding ATP-dependent protease La [Escherichia coli O32:H37
str. P4]
gi|385539926|gb|EIF86753.1| lon protease [Escherichia coli M919]
gi|385704858|gb|EIG41930.1| lon protease [Escherichia coli B799]
gi|386123463|gb|EIG72059.1| lon protease [Escherichia sp. 4_1_40B]
gi|386148710|gb|EIG95145.1| endopeptidase La [Escherichia coli 97.0246]
gi|386153402|gb|EIH04691.1| endopeptidase La [Escherichia coli 5.0588]
gi|386164110|gb|EIH25896.1| endopeptidase La [Escherichia coli 1.2264]
gi|386169844|gb|EIH36352.1| endopeptidase La [Escherichia coli 96.0497]
gi|386170627|gb|EIH42680.1| endopeptidase La [Escherichia coli 99.0741]
gi|386178401|gb|EIH55880.1| endopeptidase La [Escherichia coli 3.2608]
gi|386186552|gb|EIH69268.1| endopeptidase La [Escherichia coli 93.0624]
gi|386193105|gb|EIH87404.1| endopeptidase La [Escherichia coli JB1-95]
gi|386200397|gb|EIH99388.1| endopeptidase La [Escherichia coli 96.154]
gi|386206027|gb|EII10533.1| endopeptidase La [Escherichia coli 5.0959]
gi|386209272|gb|EII19759.1| endopeptidase La [Escherichia coli 9.0111]
gi|386217401|gb|EII33890.1| endopeptidase La [Escherichia coli 4.0967]
gi|386225977|gb|EII48302.1| endopeptidase La [Escherichia coli 2.3916]
gi|386230728|gb|EII58083.1| endopeptidase La [Escherichia coli 3.3884]
gi|386236834|gb|EII68806.1| endopeptidase La [Escherichia coli 2.4168]
gi|386241948|gb|EII78861.1| endopeptidase La [Escherichia coli 3.2303]
gi|386242806|gb|EII84541.1| endopeptidase La [Escherichia coli 3003]
gi|386252837|gb|EIJ02528.1| endopeptidase La [Escherichia coli B41]
gi|386257029|gb|EIJ12520.1| endopeptidase La [Escherichia coli 900105 (10e)]
gi|388341954|gb|EIL08031.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H11
str. CVM9534]
gi|388345223|gb|EIL11009.1| DNA-binding ATP-dependent protease La [Escherichia coli O103:H25
str. CVM9340]
gi|388346436|gb|EIL12153.1| DNA-binding ATP-dependent protease La [Escherichia coli O103:H2
str. CVM9450]
gi|388360309|gb|EIL24530.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H8
str. CVM9570]
gi|388361232|gb|EIL25366.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H11
str. CVM9545]
gi|388368618|gb|EIL32243.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H8
str. CVM9574]
gi|388377632|gb|EIL40427.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CVM9942]
gi|388379313|gb|EIL41983.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CVM10026]
gi|388383819|gb|EIL45567.1| DNA-binding ATP-dependent protease La [Escherichia coli KD1]
gi|388394239|gb|EIL55542.1| DNA-binding ATP-dependent protease La [Escherichia coli 541-15]
gi|388395243|gb|EIL56467.1| DNA-binding ATP-dependent protease La [Escherichia coli KD2]
gi|388398324|gb|EIL59244.1| DNA-binding ATP-dependent protease La [Escherichia coli 576-1]
gi|388400948|gb|EIL61633.1| DNA-binding ATP-dependent protease La [Escherichia coli 75]
gi|388406308|gb|EIL66714.1| DNA-binding ATP-dependent protease La [Escherichia coli 541-1]
gi|388420454|gb|EIL80146.1| DNA-binding ATP-dependent protease La [Escherichia coli CUMT8]
gi|390785541|gb|EIO53083.1| ATP-dependent protease La [Escherichia coli TW06591]
gi|391259123|gb|EIQ18198.1| ATP-dependent protease La [Shigella flexneri K-1770]
gi|391288801|gb|EIQ47300.1| ATP-dependent protease La [Shigella sonnei 3226-85]
gi|391289280|gb|EIQ47775.1| ATP-dependent protease La [Shigella sonnei 3233-85]
gi|391296816|gb|EIQ54892.1| ATP-dependent protease La [Shigella sonnei 4822-66]
gi|391315324|gb|EIQ72857.1| ATP-dependent protease La [Escherichia coli EPEC C342-62]
gi|394390769|gb|EJE67729.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H8
str. CVM9602]
gi|394394618|gb|EJE71181.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CVM10224]
gi|394399937|gb|EJE75898.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H8
str. CVM9634]
gi|394405880|gb|EJE80977.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H11
str. CVM9553]
gi|394409052|gb|EJE83639.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H11
str. CVM9455]
gi|394431104|gb|EJF03347.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CVM10030]
gi|394433367|gb|EJF05399.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CVM9952]
gi|397786922|gb|EJK97753.1| ATP-dependent protease La [Escherichia coli STEC_O31]
gi|397903016|gb|EJL19323.1| ATP-dependent protease La [Shigella sonnei str. Moseley]
gi|404292800|gb|EJZ49591.1| lon protease [Escherichia sp. 1_1_43]
gi|406779095|gb|AFS58519.1| DNA-binding ATP-dependent protease La [Escherichia coli O104:H4
str. 2009EL-2050]
gi|407063924|gb|AFS84971.1| DNA-binding ATP-dependent protease La [Escherichia coli O104:H4
str. 2009EL-2071]
gi|408174742|gb|EKI01706.1| ATP-dependent protease La [Escherichia coli 5905]
gi|408192340|gb|EKI17916.1| ATP-dependent protease La [Escherichia coli 5412]
gi|408198911|gb|EKI24122.1| ATP-dependent protease La [Escherichia coli TW15901]
gi|408206227|gb|EKI31039.1| ATP-dependent protease La [Escherichia coli TW00353]
gi|408207205|gb|EKI31959.1| ATP-dependent protease La [Escherichia coli ARS4.2123]
gi|408218931|gb|EKI43113.1| ATP-dependent protease La [Escherichia coli 3006]
gi|408221641|gb|EKI45574.1| ATP-dependent protease La [Escherichia coli 07798]
gi|408232198|gb|EKI55449.1| ATP-dependent protease La [Escherichia coli N1]
gi|408310094|gb|EKJ27178.1| ATP-dependent protease La [Escherichia coli EC1865]
gi|408347914|gb|EKJ62057.1| ATP-dependent protease La [Escherichia coli 0.1288]
gi|408573159|gb|EKK49018.1| ATP-dependent protease La [Escherichia coli 8.0566]
gi|408573672|gb|EKK49502.1| ATP-dependent protease La [Escherichia coli 8.0569]
gi|412961688|emb|CCK45595.1| DNA-binding, ATP-dependent protease La [Escherichia coli chi7122]
gi|412968303|emb|CCJ42920.1| DNA-binding, ATP-dependent protease La; heat shock K-protein
[Escherichia coli]
gi|421934146|gb|EKT91923.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H11
str. CFSAN001630]
gi|421945314|gb|EKU02531.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CFSAN001629]
gi|421946798|gb|EKU03912.1| DNA-binding ATP-dependent protease La [Escherichia coli O111:H8
str. CFSAN001632]
gi|429399392|gb|EKZ35713.1| lon protease [Escherichia coli O104:H4 str. Ec11-9450]
gi|429399700|gb|EKZ36020.1| lon protease [Escherichia coli O104:H4 str. Ec11-9990]
gi|429440107|gb|EKZ76086.1| lon protease [Escherichia coli O104:H4 str. Ec12-0465]
gi|429451012|gb|EKZ86904.1| lon protease [Escherichia coli O104:H4 str. Ec12-0466]
gi|429456504|gb|EKZ92349.1| lon protease [Escherichia coli O104:H4 str. Ec11-9941]
gi|430880735|gb|ELC04010.1| lon protease [Escherichia coli KTE2]
gi|430900426|gb|ELC22445.1| lon protease [Escherichia coli KTE11]
gi|430901426|gb|ELC23394.1| lon protease [Escherichia coli KTE12]
gi|430909945|gb|ELC31303.1| lon protease [Escherichia coli KTE16]
gi|430912046|gb|ELC33297.1| lon protease [Escherichia coli KTE15]
gi|430918695|gb|ELC39696.1| lon protease [Escherichia coli KTE25]
gi|430922724|gb|ELC43471.1| lon protease [Escherichia coli KTE21]
gi|430929271|gb|ELC49782.1| lon protease [Escherichia coli KTE26]
gi|430932805|gb|ELC53224.1| lon protease [Escherichia coli KTE28]
gi|430938444|gb|ELC58685.1| lon protease [Escherichia coli KTE39]
gi|430943767|gb|ELC63873.1| lon protease [Escherichia coli KTE44]
gi|430947423|gb|ELC67121.1| lon protease [Escherichia coli KTE181]
gi|430947714|gb|ELC67411.1| lon protease [Escherichia coli KTE178]
gi|430956177|gb|ELC74853.1| lon protease [Escherichia coli KTE187]
gi|430966663|gb|ELC84026.1| lon protease [Escherichia coli KTE188]
gi|430974575|gb|ELC91498.1| lon protease [Escherichia coli KTE193]
gi|430985239|gb|ELD01845.1| lon protease [Escherichia coli KTE201]
gi|430992494|gb|ELD08865.1| lon protease [Escherichia coli KTE204]
gi|430997202|gb|ELD13469.1| lon protease [Escherichia coli KTE205]
gi|430999939|gb|ELD16013.1| lon protease [Escherichia coli KTE206]
gi|431010399|gb|ELD24747.1| lon protease [Escherichia coli KTE208]
gi|431010817|gb|ELD25161.1| lon protease [Escherichia coli KTE210]
gi|431013141|gb|ELD26875.1| lon protease [Escherichia coli KTE213]
gi|431018569|gb|ELD32000.1| lon protease [Escherichia coli KTE212]
gi|431027824|gb|ELD40869.1| lon protease [Escherichia coli KTE214]
gi|431032277|gb|ELD44988.1| lon protease [Escherichia coli KTE216]
gi|431042149|gb|ELD52641.1| lon protease [Escherichia coli KTE220]
gi|431045630|gb|ELD55860.1| lon protease [Escherichia coli KTE228]
gi|431054712|gb|ELD64281.1| lon protease [Escherichia coli KTE230]
gi|431057198|gb|ELD66668.1| lon protease [Escherichia coli KTE233]
gi|431063820|gb|ELD73034.1| lon protease [Escherichia coli KTE234]
gi|431064547|gb|ELD73414.1| lon protease [Escherichia coli KTE235]
gi|431087079|gb|ELD93084.1| lon protease [Escherichia coli KTE47]
gi|431094509|gb|ELE00141.1| lon protease [Escherichia coli KTE49]
gi|431099582|gb|ELE04602.1| lon protease [Escherichia coli KTE51]
gi|431103111|gb|ELE07781.1| lon protease [Escherichia coli KTE53]
gi|431108818|gb|ELE12789.1| lon protease [Escherichia coli KTE56]
gi|431110772|gb|ELE14689.1| lon protease [Escherichia coli KTE55]
gi|431119566|gb|ELE22565.1| lon protease [Escherichia coli KTE57]
gi|431124018|gb|ELE26672.1| lon protease [Escherichia coli KTE58]
gi|431133002|gb|ELE35000.1| lon protease [Escherichia coli KTE60]
gi|431140546|gb|ELE42312.1| lon protease [Escherichia coli KTE67]
gi|431144003|gb|ELE45711.1| lon protease [Escherichia coli KTE66]
gi|431151486|gb|ELE52501.1| lon protease [Escherichia coli KTE72]
gi|431158153|gb|ELE58774.1| lon protease [Escherichia coli KTE75]
gi|431162901|gb|ELE63341.1| lon protease [Escherichia coli KTE76]
gi|431165158|gb|ELE65516.1| lon protease [Escherichia coli KTE77]
gi|431174035|gb|ELE74096.1| lon protease [Escherichia coli KTE81]
gi|431174528|gb|ELE74573.1| lon protease [Escherichia coli KTE80]
gi|431184355|gb|ELE84113.1| lon protease [Escherichia coli KTE86]
gi|431185133|gb|ELE84863.1| lon protease [Escherichia coli KTE83]
gi|431193338|gb|ELE92674.1| lon protease [Escherichia coli KTE87]
gi|431195634|gb|ELE94603.1| lon protease [Escherichia coli KTE93]
gi|431203798|gb|ELF02388.1| lon protease [Escherichia coli KTE111]
gi|431204695|gb|ELF03253.1| lon protease [Escherichia coli KTE116]
gi|431207363|gb|ELF05620.1| lon protease [Escherichia coli KTE142]
gi|431213761|gb|ELF11617.1| lon protease [Escherichia coli KTE119]
gi|431225054|gb|ELF22263.1| lon protease [Escherichia coli KTE143]
gi|431225243|gb|ELF22448.1| lon protease [Escherichia coli KTE156]
gi|431230817|gb|ELF26587.1| lon protease [Escherichia coli KTE161]
gi|431237365|gb|ELF32365.1| lon protease [Escherichia coli KTE162]
gi|431247142|gb|ELF41384.1| lon protease [Escherichia coli KTE171]
gi|431252991|gb|ELF46505.1| lon protease [Escherichia coli KTE6]
gi|431259675|gb|ELF52038.1| lon protease [Escherichia coli KTE8]
gi|431267055|gb|ELF58588.1| lon protease [Escherichia coli KTE9]
gi|431268364|gb|ELF59838.1| lon protease [Escherichia coli KTE17]
gi|431276656|gb|ELF67676.1| lon protease [Escherichia coli KTE18]
gi|431278568|gb|ELF69558.1| lon protease [Escherichia coli KTE45]
gi|431286364|gb|ELF77190.1| lon protease [Escherichia coli KTE23]
gi|431286853|gb|ELF77673.1| lon protease [Escherichia coli KTE42]
gi|431295830|gb|ELF85562.1| lon protease [Escherichia coli KTE43]
gi|431300633|gb|ELF90184.1| lon protease [Escherichia coli KTE29]
gi|431305617|gb|ELF93938.1| lon protease [Escherichia coli KTE22]
gi|431312010|gb|ELG00158.1| lon protease [Escherichia coli KTE46]
gi|431313382|gb|ELG01355.1| lon protease [Escherichia coli KTE48]
gi|431319280|gb|ELG06964.1| lon protease [Escherichia coli KTE50]
gi|431320740|gb|ELG08370.1| lon protease [Escherichia coli KTE54]
gi|431330865|gb|ELG18129.1| lon protease [Escherichia coli KTE59]
gi|431332059|gb|ELG19302.1| lon protease [Escherichia coli KTE63]
gi|431342018|gb|ELG29014.1| lon protease [Escherichia coli KTE65]
gi|431342484|gb|ELG29463.1| lon protease [Escherichia coli KTE78]
gi|431345875|gb|ELG32789.1| lon protease [Escherichia coli KTE79]
gi|431351311|gb|ELG38101.1| lon protease [Escherichia coli KTE84]
gi|431357443|gb|ELG44110.1| lon protease [Escherichia coli KTE101]
gi|431357853|gb|ELG44519.1| lon protease [Escherichia coli KTE91]
gi|431368954|gb|ELG55185.1| lon protease [Escherichia coli KTE115]
gi|431370760|gb|ELG56553.1| lon protease [Escherichia coli KTE118]
gi|431375271|gb|ELG60615.1| lon protease [Escherichia coli KTE123]
gi|431380189|gb|ELG65089.1| lon protease [Escherichia coli KTE135]
gi|431388657|gb|ELG72380.1| lon protease [Escherichia coli KTE136]
gi|431391891|gb|ELG75495.1| lon protease [Escherichia coli KTE140]
gi|431397254|gb|ELG80710.1| lon protease [Escherichia coli KTE141]
gi|431402566|gb|ELG85878.1| lon protease [Escherichia coli KTE144]
gi|431405202|gb|ELG88445.1| lon protease [Escherichia coli KTE147]
gi|431408150|gb|ELG91342.1| lon protease [Escherichia coli KTE146]
gi|431413555|gb|ELG96320.1| lon protease [Escherichia coli KTE154]
gi|431419993|gb|ELH02327.1| lon protease [Escherichia coli KTE158]
gi|431425507|gb|ELH07577.1| lon protease [Escherichia coli KTE165]
gi|431430036|gb|ELH11870.1| lon protease [Escherichia coli KTE192]
gi|431437417|gb|ELH18927.1| lon protease [Escherichia coli KTE194]
gi|431447200|gb|ELH27942.1| lon protease [Escherichia coli KTE190]
gi|431447444|gb|ELH28176.1| lon protease [Escherichia coli KTE173]
gi|431449535|gb|ELH30108.1| lon protease [Escherichia coli KTE175]
gi|431454780|gb|ELH35138.1| lon protease [Escherichia coli KTE183]
gi|431456809|gb|ELH37152.1| lon protease [Escherichia coli KTE184]
gi|431463013|gb|ELH43207.1| lon protease [Escherichia coli KTE196]
gi|431470702|gb|ELH50599.1| lon protease [Escherichia coli KTE197]
gi|431475911|gb|ELH55715.1| lon protease [Escherichia coli KTE203]
gi|431478718|gb|ELH58463.1| lon protease [Escherichia coli KTE202]
gi|431482265|gb|ELH61968.1| lon protease [Escherichia coli KTE209]
gi|431485753|gb|ELH65410.1| lon protease [Escherichia coli KTE207]
gi|431496564|gb|ELH76147.1| lon protease [Escherichia coli KTE211]
gi|431498789|gb|ELH77974.1| lon protease [Escherichia coli KTE217]
gi|431506268|gb|ELH84866.1| lon protease [Escherichia coli KTE215]
gi|431509568|gb|ELH87817.1| lon protease [Escherichia coli KTE218]
gi|431514222|gb|ELH92064.1| lon protease [Escherichia coli KTE223]
gi|431517286|gb|ELH94808.1| lon protease [Escherichia coli KTE227]
gi|431537565|gb|ELI13682.1| lon protease [Escherichia coli KTE105]
gi|431545991|gb|ELI20634.1| lon protease [Escherichia coli KTE109]
gi|431555551|gb|ELI29391.1| lon protease [Escherichia coli KTE113]
gi|431560182|gb|ELI33703.1| lon protease [Escherichia coli KTE112]
gi|431560392|gb|ELI33906.1| lon protease [Escherichia coli KTE117]
gi|431572899|gb|ELI45723.1| lon protease [Escherichia coli KTE120]
gi|431574220|gb|ELI47002.1| lon protease [Escherichia coli KTE124]
gi|431575873|gb|ELI48596.1| lon protease [Escherichia coli KTE122]
gi|431588360|gb|ELI59645.1| lon protease [Escherichia coli KTE125]
gi|431591182|gb|ELI62182.1| lon protease [Escherichia coli KTE128]
gi|431593675|gb|ELI63967.1| lon protease [Escherichia coli KTE129]
gi|431601214|gb|ELI70731.1| lon protease [Escherichia coli KTE131]
gi|431606031|gb|ELI75415.1| lon protease [Escherichia coli KTE133]
gi|431610205|gb|ELI79506.1| lon protease [Escherichia coli KTE137]
gi|431615215|gb|ELI84345.1| lon protease [Escherichia coli KTE138]
gi|431619876|gb|ELI88773.1| lon protease [Escherichia coli KTE139]
gi|431622853|gb|ELI91538.1| lon protease [Escherichia coli KTE145]
gi|431631768|gb|ELJ00074.1| lon protease [Escherichia coli KTE150]
gi|431634598|gb|ELJ02839.1| lon protease [Escherichia coli KTE148]
gi|431636890|gb|ELJ05009.1| lon protease [Escherichia coli KTE153]
gi|431649337|gb|ELJ16695.1| lon protease [Escherichia coli KTE157]
gi|431650110|gb|ELJ17447.1| lon protease [Escherichia coli KTE160]
gi|431651637|gb|ELJ18876.1| lon protease [Escherichia coli KTE163]
gi|431663402|gb|ELJ30164.1| lon protease [Escherichia coli KTE166]
gi|431665037|gb|ELJ31764.1| lon protease [Escherichia coli KTE167]
gi|431676789|gb|ELJ42872.1| lon protease [Escherichia coli KTE174]
gi|431678639|gb|ELJ44635.1| lon protease [Escherichia coli KTE176]
gi|431682068|gb|ELJ47837.1| lon protease [Escherichia coli KTE177]
gi|431694183|gb|ELJ59568.1| lon protease [Escherichia coli KTE180]
gi|431696254|gb|ELJ61441.1| lon protease [Escherichia coli KTE232]
gi|431709790|gb|ELJ74238.1| lon protease [Escherichia coli KTE88]
gi|431710590|gb|ELJ74964.1| lon protease [Escherichia coli KTE82]
gi|431711868|gb|ELJ76175.1| lon protease [Escherichia coli KTE85]
gi|431721845|gb|ELJ85837.1| lon protease [Escherichia coli KTE90]
gi|431725795|gb|ELJ89634.1| lon protease [Escherichia coli KTE94]
gi|431726376|gb|ELJ90186.1| lon protease [Escherichia coli KTE95]
gi|431733145|gb|ELJ96586.1| lon protease [Escherichia coli KTE97]
gi|431736024|gb|ELJ99366.1| lon protease [Escherichia coli KTE99]
gi|441609776|emb|CCP94815.1| ATP-dependent protease La [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441655105|emb|CCQ00168.1| ATP-dependent protease La [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|441712015|emb|CCQ07480.1| ATP-dependent protease La [Escherichia coli Nissle 1917]
gi|443420975|gb|AGC85879.1| DNA-binding ATP-dependent protease La [Escherichia coli APEC O78]
gi|449322678|gb|EMD12661.1| DNA-binding ATP-dependent protease La [Escherichia coli O08]
gi|449324926|gb|EMD14846.1| DNA-binding ATP-dependent protease La [Escherichia coli SEPT362]
gi|449324969|gb|EMD14888.1| DNA-binding ATP-dependent protease La [Escherichia coli S17]
gi|739999|prf||2004285A lon protease
Length = 784
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|401678820|ref|ZP_10810774.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Enterobacter sp. SST3]
gi|400213916|gb|EJO44848.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Enterobacter sp. SST3]
Length = 784
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 330/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ ++ E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDDGEHFSAKAEYLDSPELDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L + L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKANELTVEDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L LG RFD A RV G GL WT GG++
Sbjct: 568 ------------ITINGDNLHAYLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPYENKRDLEEIPDNVIADLQIHPVKRIEEVLSLALQN 773
>gi|383754371|ref|YP_005433274.1| ATP-dependent protease La [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381366423|dbj|BAL83251.1| putative ATP-dependent protease La [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 767
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 310/756 (41%), Positives = 459/756 (60%), Gaps = 81/756 (10%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTY-------YTARI-SSLEMTKIEMEQVEQDPDFIALSR 120
T V++EG R + E + + +T +I +S+ M + V Q +++ LS+
Sbjct: 83 TVRVLVEGKRRALIHEFHEQENFDAVDVEEFTDKIDTSMNMEALNRAVVHQFEEWVRLSK 142
Query: 121 QFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLK 180
+ + +++++ GR LAD+ + + E + +L ++D+K
Sbjct: 143 KIPPETLVSVAIIDD----AGR------------LADLIASHLNLKVETRQELLAAIDVK 186
Query: 181 VRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 240
RL K ++ R ++ +++ KI ++V Q+ K QK++ LR+Q++AI++ELGD++ E D
Sbjct: 187 ERLEKLYGVLTREMEILQMEHKIGKQVRKQMDKIQKDYYLREQIKAIRQELGDSNKSEID 246
Query: 241 LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI 300
+K+Q P + K V+KEL RL R Y++ + +LPW + SE+
Sbjct: 247 --EARKKLQEGNYPEFVQKAVEKELNRLDTFSNMHAEAGVIRNYIDCLLELPWNEESEDT 304
Query: 301 DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 360
+D+ AK+ LD DHYGL +VK RI++YLAV KL D P+LC VGPPGVGKTSLA+S+
Sbjct: 305 -VDIAVAKKILDEDHYGLTKVKDRILDYLAVHKLAKDKSAPILCLVGPPGVGKTSLATSV 363
Query: 361 ASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTG 420
A A GR+F+R SLGGV+DEA+IRGHRRTY+G+MPGR+IDGL++VG NPV LLDEIDK
Sbjct: 364 ARATGREFVRASLGGVRDEAEIRGHRRTYVGAMPGRIIDGLRKVGKKNPVFLLDEIDKLS 423
Query: 421 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVI 480
D GDP++ALLEVLDP QN TF+DH++++PFDLSKV ++ TAN IP PL DRME+I
Sbjct: 424 GDYHGDPSAALLEVLDPAQNSTFSDHFVDLPFDLSKVFWIVTANNLGNIPRPLRDRMEII 483
Query: 481 ELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNL 540
+L YT EKL IA R+L+ R Q+GL ++ + +++ +I YTRE+GVR LER +
Sbjct: 484 QLSSYTEVEKLEIAKRYLVARQRTQNGLKAKDISFGVGVLQKIISDYTRESGVRELEREI 543
Query: 541 AALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSN 600
++ R AA K+ E E+
Sbjct: 544 GSVCRKAARKIVEGEE-------------------------------------------- 559
Query: 601 TFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
+P+ V + L LG +F D +A ++ G+ G+ WT GG + E T ++
Sbjct: 560 -----APIKVTKKNLTDFLGKVKFQDTKANKKPQV-GVVTGMAWTEVGGTILPTEVTVLK 613
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPK 720
GKG+L LTGQ+GDV++ESAQ LT+VR+R+ L+L AED + DIHIH P GA+PK
Sbjct: 614 GKGKLILTGQIGDVMQESAQAGLTYVRSRSDKLKL-AED---FYEKEDIHIHLPEGAIPK 669
Query: 721 DGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVI 780
DGPSAG+T+ TA++S + K+VR+D AMTGE+TLRG VLP+GG+K+K+LAA+R G+K ++
Sbjct: 670 DGPSAGITMATAMISALTGKKVRSDVAMTGEITLRGHVLPIGGLKEKVLAAYREGMKTIV 729
Query: 781 LPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+ N KD+ ++P V LE + M++VL+ A
Sbjct: 730 LPKDNEKDIDDIPEVVREKLEFKPVESMDEVLKIAL 765
>gi|421781990|ref|ZP_16218450.1| ATP-dependent protease La [Serratia plymuthica A30]
gi|407755864|gb|EKF65987.1| ATP-dependent protease La [Serratia plymuthica A30]
Length = 784
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 326/765 (42%), Positives = 460/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPAIDEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLSDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLIKAQEVLDIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ L+++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQLERNALKKGELTVDDSAITGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + + L+D ++
Sbjct: 544 LEREISKLCRKA---------------------VKTLLMDKKIKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG R D A RV G GL WT GG++
Sbjct: 568 ------------IEINGDNLKDYLGVQRVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A L+I +R+++VL A +
Sbjct: 729 GGIKTVLIPYENKRDLEEIPDNVIADLDIHPVQRIDEVLNLALQN 773
>gi|26246450|ref|NP_752489.1| DNA-binding ATP-dependent protease La [Escherichia coli CFT073]
gi|91209513|ref|YP_539499.1| DNA-binding ATP-dependent protease La [Escherichia coli UTI89]
gi|227884550|ref|ZP_04002355.1| DNA-binding ATP-dependent protease La [Escherichia coli 83972]
gi|237707566|ref|ZP_04538047.1| DNA-binding ATP-dependent protease La [Escherichia sp. 3_2_53FAA]
gi|291281346|ref|YP_003498164.1| DNA-binding ATP-dependent protease La [Escherichia coli O55:H7 str.
CB9615]
gi|293408589|ref|ZP_06652428.1| ATP-dependent protease La [Escherichia coli B354]
gi|293418510|ref|ZP_06660945.1| ATP-dependent protease La [Escherichia coli B088]
gi|331640959|ref|ZP_08342094.1| ATP-dependent protease La [Escherichia coli H736]
gi|331645615|ref|ZP_08346719.1| ATP-dependent protease La [Escherichia coli M605]
gi|331656496|ref|ZP_08357458.1| ATP-dependent protease La [Escherichia coli TA206]
gi|331661820|ref|ZP_08362743.1| ATP-dependent protease La [Escherichia coli TA143]
gi|331671986|ref|ZP_08372782.1| ATP-dependent protease La [Escherichia coli TA280]
gi|331676111|ref|ZP_08376823.1| ATP-dependent protease La [Escherichia coli H591]
gi|331681834|ref|ZP_08382467.1| ATP-dependent protease La [Escherichia coli H299]
gi|332281590|ref|ZP_08394003.1| DNA-binding ATP-dependent protease La [Shigella sp. D9]
gi|417114569|ref|ZP_11965840.1| endopeptidase La [Escherichia coli 1.2741]
gi|417190896|ref|ZP_12013492.1| endopeptidase La [Escherichia coli 4.0522]
gi|417288317|ref|ZP_12075602.1| endopeptidase La [Escherichia coli TW07793]
gi|422769668|ref|ZP_16823359.1| ATP-dependent protease [Escherichia coli E482]
gi|422802320|ref|ZP_16850814.1| ATP-dependent protease [Escherichia coli M863]
gi|26106848|gb|AAN79033.1|AE016756_216 ATP-dependent protease La [Escherichia coli CFT073]
gi|1773123|gb|AAB40195.1| ATP-dependent protease LA [Escherichia coli]
gi|91071087|gb|ABE05968.1| DNA-binding, ATP-dependent protease La; heat shock K-protein
[Escherichia coli UTI89]
gi|209743834|gb|ACI70224.1| endopeptidase La [Escherichia coli]
gi|209743840|gb|ACI70227.1| endopeptidase La [Escherichia coli]
gi|226898776|gb|EEH85035.1| DNA-binding ATP-dependent protease La [Escherichia sp. 3_2_53FAA]
gi|227838636|gb|EEJ49102.1| DNA-binding ATP-dependent protease La [Escherichia coli 83972]
gi|290761219|gb|ADD55180.1| DNA-binding ATP-dependent protease La [Escherichia coli O55:H7 str.
CB9615]
gi|291325038|gb|EFE64453.1| ATP-dependent protease La [Escherichia coli B088]
gi|291471767|gb|EFF14250.1| ATP-dependent protease La [Escherichia coli B354]
gi|323943246|gb|EGB39402.1| ATP-dependent protease [Escherichia coli E482]
gi|323965126|gb|EGB60585.1| ATP-dependent protease [Escherichia coli M863]
gi|331037757|gb|EGI09977.1| ATP-dependent protease La [Escherichia coli H736]
gi|331045777|gb|EGI17903.1| ATP-dependent protease La [Escherichia coli M605]
gi|331054744|gb|EGI26753.1| ATP-dependent protease La [Escherichia coli TA206]
gi|331060242|gb|EGI32206.1| ATP-dependent protease La [Escherichia coli TA143]
gi|331070975|gb|EGI42334.1| ATP-dependent protease La [Escherichia coli TA280]
gi|331076169|gb|EGI47451.1| ATP-dependent protease La [Escherichia coli H591]
gi|331081036|gb|EGI52201.1| ATP-dependent protease La [Escherichia coli H299]
gi|332103942|gb|EGJ07288.1| DNA-binding ATP-dependent protease La [Shigella sp. D9]
gi|386141644|gb|EIG82794.1| endopeptidase La [Escherichia coli 1.2741]
gi|386191868|gb|EIH80609.1| endopeptidase La [Escherichia coli 4.0522]
gi|386247109|gb|EII93282.1| endopeptidase La [Escherichia coli TW07793]
Length = 799
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 99 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 156
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 157 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 201 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 261 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 319
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 320 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 379
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 380 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 439
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 440 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 498
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 499 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 558
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 559 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 590
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 591 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 627
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 628 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 681
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 682 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 741
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 742 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 788
>gi|421777837|ref|ZP_16214427.1| DNA-binding ATP-dependent protease La [Escherichia coli AD30]
gi|408457119|gb|EKJ80920.1| DNA-binding ATP-dependent protease La [Escherichia coli AD30]
Length = 784
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIAELDIHPVKRIEEVLTLALQN 773
>gi|331651377|ref|ZP_08352402.1| ATP-dependent protease La [Escherichia coli M718]
gi|331051118|gb|EGI23170.1| ATP-dependent protease La [Escherichia coli M718]
Length = 799
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 99 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 156
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 157 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 201 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 261 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 319
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 320 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 379
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 380 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 439
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 440 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 498
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 499 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 558
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 559 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 590
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 591 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 627
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 628 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 681
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 682 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 741
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 742 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 788
>gi|238795540|ref|ZP_04639055.1| ATP-dependent protease La [Yersinia mollaretii ATCC 43969]
gi|238720659|gb|EEQ12460.1| ATP-dependent protease La [Yersinia mollaretii ATCC 43969]
Length = 784
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 459/767 (59%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEME-----QVEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE M E E + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPVMDDREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLASLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDVTERLEYLMAMMESEIDLLQVEKRIRNRVKRQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DTPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIMSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + N L D +E+ G++
Sbjct: 544 LEREISKLCRKA--------------------------VKNLLMDKTVKHIEIT--GDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L+ LG + D A RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++PE N +DL E+P V+A LEI KR++DVL A +
Sbjct: 727 HRGGIKVVLIPEDNKRDLEEIPDNVIADLEIHPVKRIDDVLAIALQN 773
>gi|419011997|ref|ZP_13559362.1| ATP-dependent protease La [Escherichia coli DEC1D]
gi|377862762|gb|EHU27569.1| ATP-dependent protease La [Escherichia coli DEC1D]
Length = 784
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 ISDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|114048053|ref|YP_738603.1| Lon-A peptidase [Shewanella sp. MR-7]
gi|113889495|gb|ABI43546.1| Lon-A peptidase. Serine peptidase. MEROPS family S16 [Shewanella
sp. MR-7]
Length = 785
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 329/779 (42%), Positives = 466/779 (59%), Gaps = 88/779 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R + + ++ A+ LE +E ++
Sbjct: 72 GTVASILQL---LKLPDGTVK--VLVEGGRRARITRYTQEADFFVAKAEYLESEPLEDKE 126
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q +I L+++ + +S +++ + LAD
Sbjct: 127 EEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGIDEAAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ ++ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKLEDKQSVLEMTNIGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ D+ L RK++ A MPS+ + EL +L+ M P T
Sbjct: 231 NEQMKAIQKELGDLDEGHDEFEVLNRKIEEANMPSDAKEKAVAELNKLRMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW + S+ I DL A+E LD+DHYGL +VK RI+EYLAV+ +G
Sbjct: 291 VRSYVDWMTSVPWSQRSK-IKRDLAKAQEVLDTDHYGLEKVKDRILEYLAVQSRVRQLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKVIQK 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + ++++GL + + I ++ +
Sbjct: 470 ATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLLTKQIERNGLKANEIHIEDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR LER L+ + R
Sbjct: 529 VGIIRYYTREAGVRALERELSKICRKV--------------------------------- 555
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+++I + +S V+ V L+ LG RF D AE G
Sbjct: 556 -----VKMILLDKSVKSVT----------VTADNLKSFLGVQRF-DYGKAESNNQIGQVT 599
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L G
Sbjct: 600 GLAWTEVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQL------G 653
Query: 701 MN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+N + RDIH+H P GA PKDGPSAG + TALVS + VRAD AMTGE+TLRG V
Sbjct: 654 INGDFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRADVAMTGEITLRGEV 713
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LP+GG+K+K+LAAHR GIK V++P+ N +DL E+PA V+A LEI + +++VL+ A E
Sbjct: 714 LPIGGLKEKLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWIDEVLKLALE 772
>gi|16763831|ref|NP_459446.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|62179062|ref|YP_215479.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161615355|ref|YP_001589320.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167551734|ref|ZP_02345487.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167990434|ref|ZP_02571534.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231439|ref|ZP_02656497.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168237565|ref|ZP_02662623.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168240279|ref|ZP_02665211.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168261113|ref|ZP_02683086.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168465544|ref|ZP_02699426.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168818938|ref|ZP_02830938.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194450573|ref|YP_002044485.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194470202|ref|ZP_03076186.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194735362|ref|YP_002113481.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197248560|ref|YP_002145431.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264938|ref|ZP_03165012.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198244399|ref|YP_002214404.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200389422|ref|ZP_03216033.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204930547|ref|ZP_03221477.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205351761|ref|YP_002225562.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|207855930|ref|YP_002242581.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224582288|ref|YP_002636086.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238911419|ref|ZP_04655256.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|375000179|ref|ZP_09724519.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|375113377|ref|ZP_09758547.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|375117886|ref|ZP_09763053.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|375122546|ref|ZP_09767710.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|378443954|ref|YP_005231586.1| Lon protease [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378448788|ref|YP_005236147.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378698413|ref|YP_005180370.1| Lon protease [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378983055|ref|YP_005246210.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378987852|ref|YP_005251016.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379699671|ref|YP_005241399.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383495258|ref|YP_005395947.1| Lon protease [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386590383|ref|YP_006086783.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|409248896|ref|YP_006884734.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|416424706|ref|ZP_11691887.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416432831|ref|ZP_11696436.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416440101|ref|ZP_11700682.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416444540|ref|ZP_11703773.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416453746|ref|ZP_11709820.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416458588|ref|ZP_11713107.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416465624|ref|ZP_11716946.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416473282|ref|ZP_11719749.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416484370|ref|ZP_11724166.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416501555|ref|ZP_11732145.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416510473|ref|ZP_11737071.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416520602|ref|ZP_11740314.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416526653|ref|ZP_11742558.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416536137|ref|ZP_11748204.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416542341|ref|ZP_11751511.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416552361|ref|ZP_11757077.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416557284|ref|ZP_11759413.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416573528|ref|ZP_11767874.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416576689|ref|ZP_11769271.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416583719|ref|ZP_11773475.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416595067|ref|ZP_11780881.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416596608|ref|ZP_11781500.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416605757|ref|ZP_11787189.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416614718|ref|ZP_11792970.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416623399|ref|ZP_11797374.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416634043|ref|ZP_11802324.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416639005|ref|ZP_11804304.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416648503|ref|ZP_11809148.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416670921|ref|ZP_11820410.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416691332|ref|ZP_11826154.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416706820|ref|ZP_11832009.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416713234|ref|ZP_11836876.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416719435|ref|ZP_11841291.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416723571|ref|ZP_11844237.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416734153|ref|ZP_11850808.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416740073|ref|ZP_11854161.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416757173|ref|ZP_11863003.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416764385|ref|ZP_11867989.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416766794|ref|ZP_11869410.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|417339756|ref|ZP_12121242.1| ATP-dependent protease La Type I [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|417371363|ref|ZP_12141964.1| ATP-dependent protease La Type I [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|418485274|ref|ZP_13054258.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418490800|ref|ZP_13057336.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418493155|ref|ZP_13059623.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418498101|ref|ZP_13064516.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418504395|ref|ZP_13070753.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418507974|ref|ZP_13074282.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418511866|ref|ZP_13078114.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|418525616|ref|ZP_13091596.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|418763192|ref|ZP_13319316.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418766726|ref|ZP_13322798.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418771897|ref|ZP_13327903.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418781195|ref|ZP_13337080.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418784657|ref|ZP_13340494.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418791371|ref|ZP_13347134.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418793871|ref|ZP_13349597.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418799551|ref|ZP_13355217.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418844392|ref|ZP_13399184.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418860808|ref|ZP_13415383.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418864291|ref|ZP_13418826.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418866314|ref|ZP_13420777.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419727610|ref|ZP_14254578.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419733913|ref|ZP_14260808.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419738877|ref|ZP_14265633.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419743020|ref|ZP_14269688.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419749566|ref|ZP_14276045.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|419788919|ref|ZP_14314602.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419793961|ref|ZP_14319577.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|421357760|ref|ZP_15808068.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421365245|ref|ZP_15815467.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421368979|ref|ZP_15819163.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421372427|ref|ZP_15822576.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421376038|ref|ZP_15826147.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421380608|ref|ZP_15830670.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421383972|ref|ZP_15834001.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421392473|ref|ZP_15842430.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421396010|ref|ZP_15845942.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421398669|ref|ZP_15848574.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421405149|ref|ZP_15854984.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421407749|ref|ZP_15857556.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421412091|ref|ZP_15861854.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421419438|ref|ZP_15869130.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421423885|ref|ZP_15873536.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421425639|ref|ZP_15875274.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421429987|ref|ZP_15879581.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421436814|ref|ZP_15886340.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421439187|ref|ZP_15888678.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421445862|ref|ZP_15895283.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|421451186|ref|ZP_15900552.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|421572544|ref|ZP_16018190.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421577453|ref|ZP_16023041.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421582042|ref|ZP_16027583.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421584559|ref|ZP_16030067.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|422024585|ref|ZP_16371062.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422029608|ref|ZP_16375864.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427545787|ref|ZP_18926373.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427562135|ref|ZP_18931138.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427580638|ref|ZP_18935960.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427602846|ref|ZP_18940736.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427627514|ref|ZP_18945646.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427650795|ref|ZP_18950402.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427659815|ref|ZP_18955356.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427664928|ref|ZP_18960102.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427698523|ref|ZP_18965036.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|436615595|ref|ZP_20514264.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|436797182|ref|ZP_20523128.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|436810603|ref|ZP_20529641.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436813649|ref|ZP_20531837.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436831373|ref|ZP_20536041.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436849787|ref|ZP_20540924.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436856200|ref|ZP_20545305.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436863185|ref|ZP_20549728.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436871661|ref|ZP_20554835.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436878812|ref|ZP_20559231.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436886927|ref|ZP_20563333.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436894406|ref|ZP_20567884.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436904532|ref|ZP_20574549.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436909991|ref|ZP_20576576.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436918244|ref|ZP_20581415.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436925535|ref|ZP_20585967.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436934284|ref|ZP_20590288.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436941288|ref|ZP_20594848.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436949278|ref|ZP_20599292.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436959670|ref|ZP_20603867.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436975113|ref|ZP_20611389.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436987196|ref|ZP_20615840.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436999733|ref|ZP_20620306.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437010051|ref|ZP_20624031.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437018152|ref|ZP_20626644.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437035563|ref|ZP_20633489.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437046587|ref|ZP_20638403.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437049338|ref|ZP_20639958.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437056848|ref|ZP_20644216.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437065300|ref|ZP_20648985.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437078920|ref|ZP_20656414.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437081944|ref|ZP_20658019.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437089968|ref|ZP_20662540.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437117166|ref|ZP_20669786.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437122539|ref|ZP_20672381.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437132640|ref|ZP_20678090.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437137747|ref|ZP_20680542.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437149060|ref|ZP_20687933.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437151981|ref|ZP_20689652.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437160929|ref|ZP_20695002.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437172786|ref|ZP_20701309.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437176841|ref|ZP_20703645.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437188250|ref|ZP_20710254.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437238184|ref|ZP_20714101.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|437259711|ref|ZP_20717231.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437272722|ref|ZP_20724472.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437274740|ref|ZP_20725432.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437288360|ref|ZP_20730694.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437307005|ref|ZP_20734647.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437323568|ref|ZP_20739302.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437338516|ref|ZP_20743721.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437456277|ref|ZP_20760396.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437470000|ref|ZP_20765015.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437485281|ref|ZP_20769393.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437499042|ref|ZP_20773851.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437513521|ref|ZP_20777499.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437531375|ref|ZP_20780745.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437554753|ref|ZP_20784525.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437571699|ref|ZP_20788808.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437595756|ref|ZP_20796009.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437602360|ref|ZP_20798367.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437625362|ref|ZP_20805447.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437632902|ref|ZP_20806595.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437658472|ref|ZP_20811679.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437672064|ref|ZP_20816063.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437694786|ref|ZP_20821861.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437710353|ref|ZP_20826458.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437726122|ref|ZP_20829927.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437795759|ref|ZP_20837518.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437811614|ref|ZP_20841206.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437833275|ref|ZP_20844623.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|437848999|ref|ZP_20847209.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|438068066|ref|ZP_20857029.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438105778|ref|ZP_20866396.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438114453|ref|ZP_20870069.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|440761976|ref|ZP_20941042.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440768723|ref|ZP_20947688.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440772485|ref|ZP_20951389.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|445132411|ref|ZP_21382198.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|445144199|ref|ZP_21386948.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445150704|ref|ZP_21389850.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|445172334|ref|ZP_21396425.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445232597|ref|ZP_21406110.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445337411|ref|ZP_21415968.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|445343520|ref|ZP_21416989.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445354598|ref|ZP_21421497.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|452121289|ref|YP_007471537.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|16418957|gb|AAL19405.1| DNA-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|62126695|gb|AAX64398.1| DNA-binding, ATP-dependent protease la; cleaves RcsA and SulA, heat
shock k-protein (DNA binding activity) [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161364719|gb|ABX68487.1| hypothetical protein SPAB_03126 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194408877|gb|ACF69096.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194456566|gb|EDX45405.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194710864|gb|ACF90085.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195631706|gb|EDX50226.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197212263|gb|ACH49660.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243193|gb|EDY25813.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197289469|gb|EDY28832.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197938915|gb|ACH76248.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199601867|gb|EDZ00413.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204320481|gb|EDZ05684.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205271542|emb|CAR36360.1| Lon protease [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205323385|gb|EDZ11224.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205330861|gb|EDZ17625.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205334095|gb|EDZ20859.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205340013|gb|EDZ26777.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205343953|gb|EDZ30717.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205349766|gb|EDZ36397.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707733|emb|CAR32018.1| Lon protease [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224466815|gb|ACN44645.1| Lon protease [Salmonella enterica subsp. enterica serovar Paratyphi
C strain RKS4594]
gi|261245733|emb|CBG23530.1| Lon protease [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992166|gb|ACY87051.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157061|emb|CBW16545.1| Lon protease [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312911483|dbj|BAJ35457.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320084724|emb|CBY94515.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|322614728|gb|EFY11657.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618834|gb|EFY15722.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623541|gb|EFY20380.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629160|gb|EFY25939.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322631881|gb|EFY28635.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637382|gb|EFY34084.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642067|gb|EFY38677.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647886|gb|EFY44361.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322652564|gb|EFY48918.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653274|gb|EFY49607.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660577|gb|EFY56813.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664729|gb|EFY60922.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669218|gb|EFY65368.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670763|gb|EFY66896.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678998|gb|EFY75053.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322682027|gb|EFY78052.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322685144|gb|EFY81141.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322713523|gb|EFZ05094.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|323128770|gb|ADX16200.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|323192962|gb|EFZ78185.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196956|gb|EFZ82098.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203941|gb|EFZ88958.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323214499|gb|EFZ99250.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323227005|gb|EGA11186.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323230177|gb|EGA14297.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233915|gb|EGA18004.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238391|gb|EGA22449.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244078|gb|EGA28087.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246239|gb|EGA30222.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323251865|gb|EGA35728.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323261125|gb|EGA44717.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264945|gb|EGA48444.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272508|gb|EGA55915.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326622153|gb|EGE28498.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|326626796|gb|EGE33139.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|332987399|gb|AEF06382.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|353074867|gb|EHB40627.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353608253|gb|EHC61884.1| ATP-dependent protease La Type I [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|357959983|gb|EHJ84001.1| ATP-dependent protease La Type I [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|363549142|gb|EHL33499.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363554591|gb|EHL38826.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363557705|gb|EHL41910.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363564587|gb|EHL48634.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363565243|gb|EHL49279.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363571795|gb|EHL55699.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|363578798|gb|EHL62600.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|366056252|gb|EHN20578.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366065087|gb|EHN29282.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366065330|gb|EHN29520.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366071237|gb|EHN35337.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366073878|gb|EHN37942.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366080280|gb|EHN44252.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366084183|gb|EHN48094.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366829497|gb|EHN56373.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372206385|gb|EHP19889.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|380462079|gb|AFD57482.1| Lon protease [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|381299100|gb|EIC40174.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381300717|gb|EIC41775.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381301192|gb|EIC42248.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381310722|gb|EIC51548.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|381312572|gb|EIC53369.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|383797427|gb|AFH44509.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|392616051|gb|EIW98486.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392616385|gb|EIW98818.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392733472|gb|EIZ90674.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392734436|gb|EIZ91618.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392736737|gb|EIZ93899.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392747922|gb|EJA04913.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392754188|gb|EJA11107.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392755460|gb|EJA12370.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392763551|gb|EJA20358.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392763869|gb|EJA20675.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392815212|gb|EJA71156.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392826192|gb|EJA81925.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392831552|gb|EJA87185.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392840224|gb|EJA95760.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|395980756|gb|EJH89979.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395983274|gb|EJH92467.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395989997|gb|EJH99129.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|396000077|gb|EJI09092.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396003265|gb|EJI12253.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|396003657|gb|EJI12644.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396008034|gb|EJI16969.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396011054|gb|EJI19965.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396020534|gb|EJI29375.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396024460|gb|EJI33246.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396029681|gb|EJI38417.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396030459|gb|EJI39193.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396035578|gb|EJI44250.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396035933|gb|EJI44604.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396044339|gb|EJI52936.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396052134|gb|EJI60642.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396056910|gb|EJI65383.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396057304|gb|EJI65776.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396063941|gb|EJI72329.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|396064297|gb|EJI72684.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|396071393|gb|EJI79718.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|402515479|gb|EJW22893.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402516041|gb|EJW23454.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402516370|gb|EJW23781.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402531077|gb|EJW38290.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|414023309|gb|EKT06743.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414023850|gb|EKT07264.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414025326|gb|EKT08656.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414037190|gb|EKT19974.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414038660|gb|EKT21367.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414042389|gb|EKT24927.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414051736|gb|EKT33820.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414053185|gb|EKT35197.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414057651|gb|EKT39404.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414061849|gb|EKT43226.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414067323|gb|EKT47701.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|434961254|gb|ELL54572.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|434965095|gb|ELL58058.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434967684|gb|ELL60485.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434975157|gb|ELL67467.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434982330|gb|ELL74153.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434988364|gb|ELL79963.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434991633|gb|ELL83121.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434997712|gb|ELL88951.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435000876|gb|ELL91998.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435007488|gb|ELL98341.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435011459|gb|ELM02179.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435017054|gb|ELM07562.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435018220|gb|ELM08695.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435028364|gb|ELM18443.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435030976|gb|ELM20965.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435039928|gb|ELM29697.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435041424|gb|ELM31166.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435045119|gb|ELM34764.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435050064|gb|ELM39569.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435053976|gb|ELM43412.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435054335|gb|ELM43770.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435059777|gb|ELM49052.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435060274|gb|ELM49544.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435066951|gb|ELM56022.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435074930|gb|ELM63753.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435078057|gb|ELM66801.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435081744|gb|ELM70385.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435096366|gb|ELM84638.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435096876|gb|ELM85138.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435099948|gb|ELM88139.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435101276|gb|ELM89430.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435111112|gb|ELM99017.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435113538|gb|ELN01384.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435114986|gb|ELN02776.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435122187|gb|ELN09709.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435123365|gb|ELN10858.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435130869|gb|ELN18097.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435134381|gb|ELN21509.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435143454|gb|ELN30320.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435143863|gb|ELN30717.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435146442|gb|ELN33235.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435155566|gb|ELN42110.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435156170|gb|ELN42672.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435165099|gb|ELN51159.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435168054|gb|ELN53907.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435175818|gb|ELN61221.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435183760|gb|ELN68721.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435185207|gb|ELN70090.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435186993|gb|ELN71806.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435194619|gb|ELN79047.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435195907|gb|ELN80263.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435206984|gb|ELN90476.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435214885|gb|ELN97633.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435216456|gb|ELN98931.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435223965|gb|ELO05949.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435230158|gb|ELO11492.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435243441|gb|ELO23699.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435243629|gb|ELO23886.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435248152|gb|ELO28073.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435250915|gb|ELO30625.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435253181|gb|ELO32669.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435260048|gb|ELO39261.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435270471|gb|ELO48967.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435278366|gb|ELO56237.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435279706|gb|ELO57450.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435282536|gb|ELO60151.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435289126|gb|ELO66116.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435291190|gb|ELO68064.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435292072|gb|ELO68861.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435297968|gb|ELO74225.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435302261|gb|ELO78236.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|435311972|gb|ELO85991.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|435321467|gb|ELO93882.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435328852|gb|ELP00310.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|435338624|gb|ELP07835.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|436416442|gb|ELP14348.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|436418434|gb|ELP16318.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436424268|gb|ELP22051.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|444847339|gb|ELX72489.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444849099|gb|ELX74216.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|444856541|gb|ELX81568.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|444860441|gb|ELX85356.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444862185|gb|ELX87045.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444873411|gb|ELX97708.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444881324|gb|ELY05368.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444887688|gb|ELY11381.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|451910293|gb|AGF82099.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 784
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|340616518|ref|YP_004734971.1| endopeptidase La [Zobellia galactanivorans]
gi|339731315|emb|CAZ94580.1| Endopeptidase La, family S16 [Zobellia galactanivorans]
Length = 822
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 316/771 (40%), Positives = 459/771 (59%), Gaps = 69/771 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G AR L R ++ P G T V+L+G RF V E+ T Y TA + E
Sbjct: 111 GTVARIL---RVLKMPDGNTT--VILQGKKRFEVAEVLTEKPYITATVRETS----EERP 161
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FEISF 167
DP+F+A+ K A+ +I ++ + + FV+S ++
Sbjct: 162 DHNDPEFLAIIESIKDLALRII---RDNPNIPSEASFAIKNIQSNSFLINFVSSNLNLNV 218
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
+++ +L+ +L+ R + ++ LQ + + I KV + + Q+E+ L QQM+ I
Sbjct: 219 DDKQELLEINNLQERALATLKHMNLELQKLELKNDIQSKVRNDMDQQQREYFLHQQMKTI 278
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
+EELG D D++ + +K + + +H KEL ++++M PQ Y+ R YL+L
Sbjct: 279 QEELGGVSHD-DEIFEMRKKAKKKKWDDKVKEHFDKELSKMQRMNPQVAEYSIQRNYLDL 337
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
DLPW + S++ DLK A+ LD DHYGL VKQRIIEYLAV KL+ D + P+LC G
Sbjct: 338 FLDLPWNEFSKD-KFDLKRAQRILDRDHYGLEDVKQRIIEYLAVLKLRNDMKSPILCLYG 396
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL S+A ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR++ LK+ G
Sbjct: 397 PPGVGKTSLGKSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIVQSLKKAGTS 456
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDEIDK S +GDP+SA+LEVLDPEQN F D++L + +DLSKV+F+ATAN
Sbjct: 457 NPVFILDEIDKLSSSHQGDPSSAMLEVLDPEQNNEFYDNFLEMGYDLSKVMFIATANNLS 516
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
I P L DRME+I + GYT EEK+ IA RHL+P+ L +HGL S+ L I + ++ +++ Y
Sbjct: 517 TIQPALRDRMEIINVTGYTIEEKVEIAKRHLLPKQLKEHGLTSKDLTIGKPQLEKIVEGY 576
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TRE+GVR+LE+ +A + R AA +A +E+
Sbjct: 577 TRESGVRSLEKQIAKMVRYAAKNIAIEEE------------------------------- 605
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
+EV V A++EKVLGP R +R+ E G+ GL WT+
Sbjct: 606 --------YEVK----------VTNAIVEKVLGPARL-ERDKYENNDIAGVVTGLAWTSV 646
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGR 707
GG++ F+E+ +GKG L++TG LG V+KESA IA+ ++++ A + +E +
Sbjct: 647 GGDILFIESILSKGKGALNITGNLGKVMKESATIAMEYIKSNAERFGIDSE----VFDKY 702
Query: 708 DIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDK 767
++HIH P GA PKDGPSAGVT++T+LVSLF++K+V+ AMTGE+TLRG VLPVGG+K+K
Sbjct: 703 NVHIHVPEGATPKDGPSAGVTMLTSLVSLFTQKKVKKSLAMTGEITLRGKVLPVGGIKEK 762
Query: 768 ILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
ILAA R IK +IL + N KD++E+ L L+ M +V++ A G
Sbjct: 763 ILAAKRARIKEIILCKDNEKDILEIKKEYLKGLKFHYVTDMHEVIDIAITG 813
>gi|188582981|ref|YP_001926426.1| ATP-dependent protease La [Methylobacterium populi BJ001]
gi|179346479|gb|ACB81891.1| ATP-dependent protease La [Methylobacterium populi BJ001]
Length = 803
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 318/762 (41%), Positives = 466/762 (61%), Gaps = 65/762 (8%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
++ R + P G T+ + +G RF V + + AR+ L++++ E+ Q P+
Sbjct: 97 NIVRYMTAPDG--THHAIFQGTQRFRVLDYLPGTPFPIARV--LQISEPEI----QTPEV 148
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
A R ++ A+E + +L Q + L T L D+ A +I E++ +L+
Sbjct: 149 EARFRHLQSQAVEALQLLPQAPQE--LITALQATTSPAALTDLAAAYMDIGPEQKQEILE 206
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+VDL R+ K L+ L+ +R+ ++I + + + + Q+E +LR+QM AI+ +LG+ND
Sbjct: 207 TVDLIQRMDKVLRLLAERLEVLRLTKEIGLQTKAAIDERQREVILREQMAAIQRQLGEND 266
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
++ L + A MP + +KELRR ++M R YL+ + +LPW
Sbjct: 267 GRAQEVAELSDAITRAQMPEEVETQARKELRRYERMPEAAAEAGMIRTYLDWLIELPWAL 326
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
E+ +++ A++ LD+DH+GL ++K RIIEYLAVRKL + + P+LCFVGPPGVGKTS
Sbjct: 327 PKEK-PINIAEARQILDADHFGLEKIKARIIEYLAVRKLALNGKAPILCFVGPPGVGKTS 385
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A+GR F+R+SLGGV DEA+IRGHRRTY+G+MPG +I +++ G + V++LDE
Sbjct: 386 LGQSIARAMGRSFVRVSLGGVHDEAEIRGHRRTYVGAMPGNIIQAVRKAGSRDCVVMLDE 445
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK G ++GDP++A+LEVLDPEQN TF D+YL VPFDLS++ F+ATAN IP PL D
Sbjct: 446 IDKMGRGIQGDPSAAMLEVLDPEQNGTFRDNYLGVPFDLSRIAFIATANMLDTIPSPLRD 505
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EK IA R+L+ R L+ +GL E +++ + + +I+ YTREAGVRN
Sbjct: 506 RMEVISLAGYTEDEKHEIARRYLVRRQLEANGLTPEQVEVEDQALTEMIRAYTREAGVRN 565
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER + L R AAV++AE S D R G +GE
Sbjct: 566 LEREIGRLFRHAAVRIAE--------GSADRVRFG--------------------VGE-- 595
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
L VLGPPRF++ E A R + PG++ GL WT GG++ F+E
Sbjct: 596 -------------------LASVLGPPRFEN-EVAMRTSVPGVATGLAWTPVGGDILFIE 635
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
AT G+G L LTGQLGDV++ESAQ AL+ V++RA L + + + DIH+H PA
Sbjct: 636 ATRAPGQGNLILTGQLGDVMRESAQAALSLVKSRAGALGI----DQAVFEKSDIHVHVPA 691
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAGV + +AL SL + + VR+DTAMTGE++LRG+VLPVGG+K+K++AA G
Sbjct: 692 GATPKDGPSAGVAMFSALTSLLTDRCVRSDTAMTGEISLRGMVLPVGGIKEKVVAAAAAG 751
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+ RV+LP RN +D E+P + A++E + + +E + +
Sbjct: 752 LSRVMLPARNRRDYEEIPRSARAAVEFVWLENVEQAISAVLD 793
>gi|419113294|ref|ZP_13658329.1| ATP-dependent protease La [Escherichia coli DEC5A]
gi|377966085|gb|EHV29498.1| ATP-dependent protease La [Escherichia coli DEC5A]
Length = 784
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRAAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|416811874|ref|ZP_11890147.1| DNA-binding ATP-dependent protease La [Escherichia coli O55:H7 str.
3256-97]
gi|419118880|ref|ZP_13663865.1| ATP-dependent protease La [Escherichia coli DEC5B]
gi|320656059|gb|EFX23975.1| DNA-binding ATP-dependent protease La [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|377973511|gb|EHV36851.1| ATP-dependent protease La [Escherichia coli DEC5B]
Length = 784
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG +LP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQILPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|452975369|gb|EME75188.1| class 3 heat-shock ATP-dependent protease LonA [Bacillus sonorensis
L12]
Length = 774
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 317/757 (41%), Positives = 461/757 (60%), Gaps = 69/757 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EG+ R + E + Y + I ++ E E+D + AL R
Sbjct: 82 PNG--TIRVLVEGIQRARIIEYNDMDDYTSVTIERID------EDTEKDVEDEALMRTLL 133
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I + K+ + + + ++ADI + + +++ +L+++D+K RL
Sbjct: 134 DHFDQYIKI--SKKISAETFAAVTDIEEPGRMADIVASHLPLKLKDKQEVLETIDVKARL 191
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
+K +L+ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELGD + ++
Sbjct: 192 NKVIDLIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELGDKEGKTGEVQK 251
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ AGMP ++ + +EL R +K+ + R Y+E + LPW A+E+ LD
Sbjct: 252 LTDKIEEAGMPDHVKETAFRELNRYEKIPSSSAESSVIRNYIEWLISLPWNDATED-RLD 310
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
+ A + LD +H+GL +VK+R++EYLAV+KL +GP+LC GPPGVGKTSLA SIA +
Sbjct: 311 INLASKILDEEHHGLEKVKERVLEYLAVQKLTHSLKGPILCLAGPPGVGKTSLAKSIAKS 370
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
LGRKF+RISLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV LLDEIDK SD
Sbjct: 371 LGRKFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKINPVFLLDEIDKMASDF 430
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDPASA+LEVLDPEQN TF+DHY+ FDLSKV+F+ATAN IP PL DRME+I +
Sbjct: 431 RGDPASAMLEVLDPEQNHTFSDHYIEETFDLSKVLFIATANNLATIPGPLRDRMEIITIA 490
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ I HL+P+ L +HGL LQI + V VI+ YTREAGVR+LER +AA+
Sbjct: 491 GYTEVEKVEIVKDHLLPKQLKEHGLKKSNLQIRDQAVLDVIRYYTREAGVRSLERQIAAI 550
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E++ R
Sbjct: 551 CRKAAKLIVSGERK---------------------------------------------R 565
Query: 604 ITSPLVVDEAMLEKVLGPP--RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRG 661
IT V E LE LG R+ E +++ G+ GL +T GG+ +E + G
Sbjct: 566 IT----VTEKNLEDYLGKRIFRYGQAELDDQI---GVVTGLAYTAAGGDTLSIEVSLSPG 618
Query: 662 KGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKD 721
KG+L LTG+LGDV++ESAQ A ++VR++A +L++ + + DIHIH P GAVPKD
Sbjct: 619 KGKLILTGKLGDVMRESAQAAFSYVRSKAEELKISP----DFHEKHDIHIHVPEGAVPKD 674
Query: 722 GPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVIL 781
GPSAG+T+ TALVS + + V D MTGE+TLRG VLP+GG+K+K LAAHR G+K VI+
Sbjct: 675 GPSAGITMATALVSALTGRPVSRDVGMTGEITLRGRVLPIGGLKEKTLAAHRAGLKTVIM 734
Query: 782 PERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
P+ N KD+ ++P +V L + +++VL+ A G
Sbjct: 735 PKDNEKDIEDIPKSVREGLTFVPVVHLDEVLQHALVG 771
>gi|390435718|ref|ZP_10224256.1| DNA-binding ATP-dependent protease La [Pantoea agglomerans IG1]
Length = 784
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 327/771 (42%), Positives = 462/771 (59%), Gaps = 90/771 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + L+ G ++ A+ L +IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRAHITTLADNGDHFVAQAEYLVSPEIEEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNNIDDAAR----------------LADTVAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYEALKRKIDAAKMPEEAREKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRKAQETLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+ + ++++ L + + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLTKQIERNALKANEITVEDSAIVGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A + S L+D
Sbjct: 544 LERELSKLCRKA---------------------VKSLLMD-------------------- 562
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
+ + ++ L+ LG RFD ++ RV G GL WT GG++
Sbjct: 563 -------KTKKHININGENLKDFLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
HR GIK V++P+ N +DL E+P V+A LEI KR+E+VL A E P+
Sbjct: 727 HRGGIKTVLIPDDNKRDLEEIPQNVIADLEIHPVKRIEEVLNLALE-NAPY 776
>gi|387610964|ref|YP_006114080.1| ATP-dependent protease La [Escherichia coli ETEC H10407]
gi|309700700|emb|CBI99996.1| ATP-dependent protease La [Escherichia coli ETEC H10407]
Length = 784
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KYIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|117921100|ref|YP_870292.1| Lon-A peptidase [Shewanella sp. ANA-3]
gi|117613432|gb|ABK48886.1| Lon-A peptidase. Serine peptidase. MEROPS family S16 [Shewanella
sp. ANA-3]
Length = 785
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 329/779 (42%), Positives = 463/779 (59%), Gaps = 88/779 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R + + ++ A+ LE +E ++
Sbjct: 72 GTVASILQL---LKLPDGTVK--VLVEGGRRTRITRYTQEADFFVAKAEYLESEPLEDKE 126
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q +I L+++ + +S +++ + LAD
Sbjct: 127 EEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGIDEAAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ ++ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKLEDKQSVLEMTNVGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ D+ L RK++ A MPS+ + EL +L+ M P T
Sbjct: 231 NEQMKAIQKELGDLDEGHDEFEVLNRKIEEANMPSDAKEKAVAELNKLRMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW + S+ I DL A+E LD+DHYGL +VK RI+EYLAV+ +G
Sbjct: 291 VRSYVDWMTSVPWSQRSK-IKRDLAKAQEVLDTDHYGLEKVKDRILEYLAVQSRVRQLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKVIQK 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + ++++GL + + I ++ +
Sbjct: 470 ATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLLTKQIERNGLKANEIHIEDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR LER L+ + R + LLD +
Sbjct: 529 VGIIRYYTREAGVRALERELSKICRKVVKMI---------------------LLDKSI-- 565
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ V L+ LG RF D AE G
Sbjct: 566 -------------------------KSVTVTADNLKSFLGVQRF-DYGKAESNNQIGQVT 599
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L G
Sbjct: 600 GLAWTEVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQL------G 653
Query: 701 MN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+N + RDIH+H P GA PKDGPSAG + TALVS + VRAD AMTGE+TLRG V
Sbjct: 654 INGDFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRADVAMTGEITLRGEV 713
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LP+GG+K+K+LAAHR GIK V++P+ N +DL E+PA V+A LEI + +++VL+ A E
Sbjct: 714 LPIGGLKEKLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWVDEVLKLALE 772
>gi|50556774|ref|XP_505795.1| YALI0F23595p [Yarrowia lipolytica]
gi|74632314|sp|Q6C0L7.1|LONP2_YARLI RecName: Full=Lon protease homolog 2, peroxisomal
gi|49651665|emb|CAG78606.1| YALI0F23595p [Yarrowia lipolytica CLIB122]
Length = 952
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 352/867 (40%), Positives = 492/867 (56%), Gaps = 127/867 (14%)
Query: 36 GKNQQEV-IHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR-GTYYT 93
G N EV ++ G R + R SG + +V+EGL R + +L + G T
Sbjct: 117 GTNSTEVNTSVYSFGTVCRIVRFER-----SGTEDFQIVVEGLSRLELGQLVDKSGLVPT 171
Query: 94 ARIS------------------SLEMTKIEMEQVE----QDPDFIALSRQFKATAMELI- 130
ARI +K E+ Q+E + I L+ + AT +
Sbjct: 172 ARIKVRVDEDGESASSDESSDKEPTWSKTELSQLEVLHASAKEIIDLAAKSNATQFSKLM 231
Query: 131 --------SVLEQKQKTG---GRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDL 179
SV++Q K G G + +T + L D+ +A FE+++ +L + +
Sbjct: 232 ASQTTVAASVMKQLTKLGPNPGSARDTRKTAGM--LVDLLMAILPTDFEDKIAVLAAFSI 289
Query: 180 KVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD--D 237
R++K +E++ L +++ EKI V+ +++K Q+E+LLRQ+MRAI+EELG+ DD +
Sbjct: 290 PERIAKGSEILKTKLDMMKITEKIDSTVDSKMNKQQREYLLRQKMRAIQEELGETDDRGE 349
Query: 238 EDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKAS 297
+DDL L +K+QS + K V +EL+R+K+M P Q Y R YLE IA+LPW+K +
Sbjct: 350 DDDLKELTQKLQSLKLSPEADKVVSRELKRIKRMPPTQAEYQVCRTYLETIAELPWDKCT 409
Query: 298 EEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK---------------------P 336
E+ + + A+ LD+DHYGL +K+R++EYLAV +LK P
Sbjct: 410 EDTVVTVDQARTILDNDHYGLSHIKKRLLEYLAVLRLKSLRSESEVAQEETAAAASSEGP 469
Query: 337 DA-------------RGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
+ R P+L VGPPGVGKTSLA S+A ALGRKF R+SLGGV+DE++IR
Sbjct: 470 NGQLDDSAKPIDYSNRAPILLLVGPPGVGKTSLAKSVARALGRKFQRLSLGGVRDESEIR 529
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTG-SDVRGDPASALLEVLDPEQNKT 442
GHRRTY+G+MPG I GL++VGV NPV+LLDEIDK G ++ GDPA+A+LEVLDPEQN T
Sbjct: 530 GHRRTYVGAMPGLFIQGLRQVGVNNPVVLLDEIDKIGGANFHGDPAAAMLEVLDPEQNAT 589
Query: 443 FNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRV 502
F DHY+N P DLSK IF+ATAN IP PLLDRME + L GYT EKL IA ++L+P+
Sbjct: 590 FRDHYINFPVDLSKCIFIATANNLDTIPAPLLDRMETVHLEGYTYMEKLHIAKKYLVPKQ 649
Query: 503 LDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPS 562
+GL + + IP+ ++ + +YTREAGVRNLER + A+ RA AV A+
Sbjct: 650 TKANGLEVDQVVIPDDVLLHICTKYTREAGVRNLERKIGAVCRAKAVDYAKSLS------ 703
Query: 563 SKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP 622
AD E+ V + H + P+V E + + +LG
Sbjct: 704 ----------------ADDGELITVVDEAKKGAHSSYD------PVVTIENLTD-ILGME 740
Query: 623 RFDDREAAERVAAP-----GISVGLVW--TNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
+ D +A + P G+ GL + T GG ++F EAT M GKG+L LTG+LGDVI
Sbjct: 741 VYTDEDAQDAKEEPNSSHIGVVNGLAYMGTGNGGLLKF-EATQMPGKGQLKLTGKLGDVI 799
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
+ESAQIAL+WV++ A L + + DIH+H PAGA+PKDGPSAGV + A VS
Sbjct: 800 QESAQIALSWVKSNAAALHIDTD-----FDKVDIHLHAPAGAIPKDGPSAGVAMTLAFVS 854
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEV--- 792
LF K + AMTGEMTLRG VLPVGG+++K+L AH G+ R++LP N +D+ E
Sbjct: 855 LFMGKPIPPSIAMTGEMTLRGRVLPVGGIREKLLGAHLAGVNRIMLPLANKRDVDEEQRK 914
Query: 793 --PAAVLASLEIILAKRMEDVLEQAFE 817
VL +EI K M DVLE ++
Sbjct: 915 GGDGGVLDKMEISYVKYMWDVLELVWD 941
>gi|421618978|ref|ZP_16059944.1| ATP-dependent protease La [Pseudomonas stutzeri KOS6]
gi|409779070|gb|EKN58746.1| ATP-dependent protease La [Pseudomonas stutzeri KOS6]
Length = 798
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/774 (42%), Positives = 464/774 (59%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R ++ + A ++ +E +++
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGVIERFIEDDGHCRAEVALIEEAEVD--- 119
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
SR+ + L+S EQ + G + +VL I +L D A
Sbjct: 120 ----------SRESEVFTRSLLSQFEQYVQLGKKVPAEVLSSLSSIDEPARLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ +L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQEILEITELPARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++++AG+ + + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDIDEGHNEIDDLKKRIENAGLSKDAYAKAQAELNKLKQMSPMSAEATVVRT 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
Y++ + ++PW KA+ ++ LDL A+E LD+DHYGL VK RI+EYLAV+K +GPVL
Sbjct: 290 YIDWLVNVPW-KAASKVRLDLAKAEEVLDADHYGLEEVKDRILEYLAVQKRVKKLKGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA + RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIARSTNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ TA
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTA 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IP PLLDRMEVI LPGYT +EK+ IA R+L P+ + +GL + L EA ++ +
Sbjct: 469 N-SMNIPAPLLDRMEVIRLPGYTEDEKVNIATRYLAPKQIQANGLKTAELDFHEAAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR+LER LA + R KV ++
Sbjct: 528 IRYYTREAGVRSLERQLAKVCR----KVVKE----------------------------- 554
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
H F +T VD LE LG +F AE G GL
Sbjct: 555 ------------HAAEKRFHVT----VDAESLEHFLGVRKF-RYGLAELQDQIGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG L TG LG+V+ ES ALT VR+RA L + ++
Sbjct: 598 WTQVGGELLTIEAAVVPGKGRLTKTGSLGEVMGESITAALTVVRSRAASLGI----AVDF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ +DIHIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKQDIHIHVPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N +DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENQRDLKEIPENIKRDLQIKPVKWIDEVLQIALQ 767
>gi|313206544|ref|YP_004045721.1| ATP-dependent protease la [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|383485847|ref|YP_005394759.1| ATP-dependent protease la [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|416109721|ref|ZP_11591601.1| ATP-dependent protease La [Riemerella anatipestifer RA-YM]
gi|442314255|ref|YP_007355558.1| ATP-dependent Lon protease, bacterial type [Riemerella
anatipestifer RA-CH-2]
gi|312445860|gb|ADQ82215.1| ATP-dependent protease La [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|315023515|gb|EFT36519.1| ATP-dependent protease La [Riemerella anatipestifer RA-YM]
gi|380460532|gb|AFD56216.1| ATP-dependent protease la [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|441483178|gb|AGC39864.1| ATP-dependent Lon protease, bacterial type [Riemerella
anatipestifer RA-CH-2]
Length = 796
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/769 (40%), Positives = 458/769 (59%), Gaps = 70/769 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L + ++ P G +T ++ G+ RF + +L + + A I L T + ++
Sbjct: 97 GTTAKILKI---IKLPDGNIT--AIMRGVRRFKLNKLVEKEPFLKAEIEKLNETSTKSKE 151
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFE 168
++ AL K A+++I + Q + +E+ +L + A+ + + E
Sbjct: 152 -----EYEALIENIKDLALKIIELDPQIPNSARFAITNIESQ--EELLNYICANAKFTAE 204
Query: 169 EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIK 228
E+ +L++ VR K EL+ + + I QK ++ K+Q+E+ L QQ++AI+
Sbjct: 205 EKQKLLETKSFLVRAKKCYELMHDEFNKLELRNIIHQKTTREMDKNQREYFLNQQIKAIQ 264
Query: 229 EELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELI 288
EELG E+D L+ K + I +H QKE+ RL + P P Y R YL+
Sbjct: 265 EELGGGP--ENDAAELQEKAKKIKWNEEIEQHFQKEIHRLNRQNPHSPDYNVQRNYLDFF 322
Query: 289 ADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGP 348
DLPWE S++I DL A+ L+S+H+G+ VK+RI+EY+AV KLK + + P+LC VGP
Sbjct: 323 TDLPWEHYSKDI-FDLNRAENVLNSEHFGMEDVKKRILEYIAVLKLKNNMKSPILCLVGP 381
Query: 349 PGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCN 408
PGVGKTSL S+A ALGRK+IRISLGG+ DE++IRGHR+TYIG+M GR++ +K+ G N
Sbjct: 382 PGVGKTSLGKSVADALGRKYIRISLGGLHDESEIRGHRKTYIGAMAGRILQSIKKAGTSN 441
Query: 409 PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQP 468
PV++LDEIDK G + GDP+SALLEVLDPEQNKTF D++L + +DLSKV+F+ATAN
Sbjct: 442 PVIVLDEIDKIGQGIHGDPSSALLEVLDPEQNKTFYDNFLEIGYDLSKVMFIATANSLNT 501
Query: 469 IPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYT 528
I PLLDRME I+L GYT EEK++IA +HLI + + ++GL + L++ + +I+ +T
Sbjct: 502 IQRPLLDRMEAIQLSGYTVEEKVQIAKKHLIKKQIAENGLKNTQLKLGVKEITHIIESHT 561
Query: 529 REAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEV 588
RE+GVRNLE+ +A +AR A+++ +E E
Sbjct: 562 RESGVRNLEKKIAKIARWVALQIT-------------------------------MEKEY 590
Query: 589 IPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFG 648
P ++ A ++++LG P + +E + PG+ GL WT+ G
Sbjct: 591 NPK------------------INIATIDEILGVPI--KKNLSEMLDVPGVVTGLAWTSVG 630
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
G++ F+E+ GKG L +TG LG+V+KESA IAL +++A+ L + E L +
Sbjct: 631 GDILFIESILSEGKGNLTMTGNLGNVMKESATIALEYIKAKHQSLGIEQET----LSKNN 686
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
IH+H P GA PKDGPSAG+ ++T++VS F K+VR AMTGE+TLRG VLPVGG+K+K+
Sbjct: 687 IHLHIPEGATPKDGPSAGIAMLTSMVSSFRNKKVRPHIAMTGEITLRGKVLPVGGIKEKL 746
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LAA R GIK VIL E N KD E+ L SL+I A ME+V+ A E
Sbjct: 747 LAASRSGIKEVILCEDNKKDYEEIKDKSLNSLKIHYANTMEEVINLALE 795
>gi|113970828|ref|YP_734621.1| Lon-A peptidase [Shewanella sp. MR-4]
gi|113885512|gb|ABI39564.1| Lon-A peptidase. Serine peptidase. MEROPS family S16 [Shewanella
sp. MR-4]
Length = 785
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 329/779 (42%), Positives = 463/779 (59%), Gaps = 88/779 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R + + ++ A+ LE +E ++
Sbjct: 72 GTVASILQL---LKLPDGTVK--VLVEGGRRARITRYTQEADFFVAKAEYLESEPLEDKE 126
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q +I L+++ + +S +++ + LAD
Sbjct: 127 EEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGIDEAAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ ++ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKLEDKQSVLEMTNIGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ D+ L RK++ A MPS+ + EL +L+ M P T
Sbjct: 231 NEQMKAIQKELGDLDEGHDEFEVLNRKIEEANMPSDAKEKAVAELNKLRMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW + S+ I DL A+E LD+DHYGL +VK RI+EYLAV+ +G
Sbjct: 291 VRSYVDWMTSVPWSQRSK-IKRDLAKAQEVLDTDHYGLEKVKDRILEYLAVQSRVRQLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKVIQK 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + ++++GL + + I ++ +
Sbjct: 470 ATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLLTKQIERNGLKANEIHIEDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR LER L+ + R + LLD +
Sbjct: 529 VGIIRYYTREAGVRALERELSKICRKVVKMI---------------------LLDKSI-- 565
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ V L+ LG RF D AE G
Sbjct: 566 -------------------------KSVTVTADNLKSFLGVQRF-DYGKAESNNQIGQVT 599
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L G
Sbjct: 600 GLAWTEVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQL------G 653
Query: 701 MN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+N + RDIH+H P GA PKDGPSAG + TALVS + VRAD AMTGE+TLRG V
Sbjct: 654 INGDFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRADVAMTGEITLRGEV 713
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LP+GG+K+K+LAAHR GIK V++P+ N +DL E+PA V+A LEI + +++VL+ A E
Sbjct: 714 LPIGGLKEKLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWIDEVLKLALE 772
>gi|194446124|ref|YP_002039693.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|418807603|ref|ZP_13363161.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418812141|ref|ZP_13367665.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418815500|ref|ZP_13371001.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418821319|ref|ZP_13376744.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418831778|ref|ZP_13386728.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418835780|ref|ZP_13390671.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418838764|ref|ZP_13393606.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418853326|ref|ZP_13408019.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|194404787|gb|ACF65009.1| ATP-dependent protease La [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|392776881|gb|EJA33567.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392778866|gb|EJA35537.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392790914|gb|EJA47407.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392791952|gb|EJA48420.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392798675|gb|EJA54946.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392803055|gb|EJA59256.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392814590|gb|EJA70541.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392827374|gb|EJA83083.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
Length = 784
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ V ++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEINV----DNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|425900379|ref|ZP_18876970.1| endopeptidase La [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397890839|gb|EJL07321.1| endopeptidase La [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 798
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/759 (43%), Positives = 462/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S ++ E++ E++ + S
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID----EVDAPERESEVFVRS---- 129
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPI---HKLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 130 -----LLSQFEQYVQLGKKVPAEVLSSLNSIDEPSRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEVEELKKRIDAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ E ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGELEFDEEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A +E AL E
Sbjct: 543 QIAKVCRKAV-------KEHAL------------------------------------EK 559
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
+ ++TS L LE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 560 RFSVKVTSDL------LEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKT 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|432368418|ref|ZP_19611523.1| lon protease [Escherichia coli KTE10]
gi|430888884|gb|ELC11555.1| lon protease [Escherichia coli KTE10]
Length = 784
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPWNT 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|392541298|ref|ZP_10288435.1| DNA-binding ATP-dependent protease La [Pseudoalteromonas piscicida
JCM 20779]
Length = 785
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 329/781 (42%), Positives = 460/781 (58%), Gaps = 88/781 (11%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI- 104
+ G A L L ++ P G V V++EG R + E Y+ + + +
Sbjct: 69 YQTGTIATVLQL---LKLPDGTVK--VLVEGTQRAKIDEFLITDEYFLTQAQYIPSQDVD 123
Query: 105 EMEQ-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
E EQ + Q ++ L+++ + +S +++ + LAD
Sbjct: 124 EQEQDILVRSAISQFEGYVKLNKKIPPEVLTSVSGIDEAAR----------------LAD 167
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
A I E+ +L+ D+ RL L++ + ++V +KI +V+ Q+ KSQ+E
Sbjct: 168 TMAAHMPIKVPEKQKVLEINDVTERLEYLMALMEGEIDLLQVEKKIRSRVKKQMEKSQRE 227
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELG+ DD D+ AL++++ A MP + EL +LK M P
Sbjct: 228 YYLNEQMKAIQKELGELDDVPDEFEALKKRISEANMPQEAEEKALSELNKLKMMSPMSAE 287
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
T R Y+E + ++PW+K S+ + DL A++ LD+DHYGL +VK RIIEYLAV++
Sbjct: 288 ATVVRSYIETMINVPWKKRSK-VKKDLAGAQKILDADHYGLEKVKDRIIEYLAVQQRTNK 346
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC VGPPGVGKTSL SIA + GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+L
Sbjct: 347 LKGPILCLVGPPGVGKTSLGQSIARSTGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKL 406
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
I + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN F DHYL V +DLS V
Sbjct: 407 IQSMSKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSNFADHYLEVDYDLSDV 466
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N IP PLLDRMEVI L GYT +EKL IA +HLIP+ + ++GL + I +
Sbjct: 467 MFVATSNSFN-IPGPLLDRMEVIRLSGYTEDEKLNIAKQHLIPKQVKRNGLKESEINIED 525
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+ + +I+ YTREAGVRNLER ++ L R A + LLD
Sbjct: 526 SAIIGIIRYYTREAGVRNLEREVSKLCRKAVKNI---------------------LLDKN 564
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAA 635
+ +V+++ LE LG R D E +RV
Sbjct: 565 VKQ---------------------------VVINQENLEDFLGVQRHDYGKAEDGDRV-- 595
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
G GL WT GG++ +E A+ GKG+L TG LGDV++ES Q A+T VR RA L++
Sbjct: 596 -GQVTGLAWTEVGGDLLTIECAAVPGKGKLAYTGSLGDVMQESIQAAMTVVRNRADKLRI 654
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
+ + RDIH+H P GA PKDGPSAG+ +VT LVS + VRAD AMTGE+TLR
Sbjct: 655 ----NDDFYEKRDIHVHVPEGATPKDGPSAGIAMVTGLVSSLTGNPVRADVAMTGEITLR 710
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
G VLP+GG+K+K+LAAHR GIKRV++P++N +DL E+P VL L+I +++VL A
Sbjct: 711 GEVLPIGGLKEKLLAAHRGGIKRVLIPKKNERDLKEIPENVLEGLDIHAVSWIDEVLSLA 770
Query: 816 F 816
Sbjct: 771 L 771
>gi|340758791|ref|ZP_08695373.1| lon protease [Fusobacterium varium ATCC 27725]
gi|251836568|gb|EES65103.1| lon protease [Fusobacterium varium ATCC 27725]
Length = 769
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 310/775 (40%), Positives = 469/775 (60%), Gaps = 75/775 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N GV L + V+ P+ + V++E R +++++ T Y L+ T +
Sbjct: 63 YNIGVIVNILQI---VKMPNNNIK--VLVEAEDRVTIEDIEVGETEYKVAYKILKCTNGK 117
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVP----IHKLADIFVA 161
++ E A+ R+ + + + + TG + LL + I+ DI +
Sbjct: 118 TKETE------AVYRKVLSYFEKYVGL------TGKISSELLVNLKGIKDINNAFDIISS 165
Query: 162 SFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLR 221
+ + E + +L+ D+K R K EL+ ++ + +KI KV+ +++++QK + ++
Sbjct: 166 NLPVKSELRQELLEIFDIKERGYKLLELLTNEMEIASLEKKIDDKVKTKMNEAQKAYYIK 225
Query: 222 QQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS 281
+++ A+KEELGD D DD++ L K++ A +P + + + E+++L KM P T S
Sbjct: 226 EKITAMKEELGDYSQD-DDMLDLVEKLKKAKLPKEVKQKLDVEMKKLSKMPPFSAEATVS 284
Query: 282 RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGP 341
R Y+E + DLPWEK++++I LDLK A + L+ DHYGL K R+++YLAV+KL P+ +G
Sbjct: 285 RNYIETVLDLPWEKSTKDI-LDLKKANDILERDHYGLKDAKNRVLDYLAVKKLNPNMKGG 343
Query: 342 VLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 401
+LC GPPG+GKTSL SIA A+GRKF+R+SLGG++DEA+IRGHRRTYIGSMPG+LI +
Sbjct: 344 ILCLAGPPGIGKTSLVKSIADAMGRKFVRVSLGGMRDEAEIRGHRRTYIGSMPGKLIKAM 403
Query: 402 KRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVA 461
K G NPV+LLDEIDK +D +GDPASA+LEVLDPEQN F DHY+++PFDLSKV FVA
Sbjct: 404 KDAGTKNPVILLDEIDKMSNDYKGDPASAMLEVLDPEQNSHFEDHYIDMPFDLSKVFFVA 463
Query: 462 TANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVK 521
TAN + + PPL DRME+I + YT EKL IA +LI + +++GL + IP+ ++
Sbjct: 464 TANDLRTVSPPLRDRMEIINISSYTEFEKLHIAKNYLIKQAKEENGLKDYDIHIPDNVIL 523
Query: 522 LVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADG 581
+I YTREAGVR+L+R + L R A +V EQ++++
Sbjct: 524 KIIDEYTREAGVRSLKREIITLCRKIAREVVEQKKKK----------------------- 560
Query: 582 AEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVG 641
F I S + LEK+LG P+F + E+ G+ G
Sbjct: 561 --------------------FTIKS------SSLEKLLGKPKFRPEKMKEKQPKQGVVNG 594
Query: 642 LVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGM 701
L WT+ GG V+ ++ GKGE+ LTG LG+V+KESAQ+A T+V+A +L +
Sbjct: 595 LAWTSVGGVTLEVQGVSIPGKGEISLTGTLGNVMKESAQVAFTYVKANLDKYKL---ENP 651
Query: 702 NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPV 761
+ ++IH+HFP GA PKDGPSAG+T+VTA++S+ + ++VR D AMTGE+T+ G VL +
Sbjct: 652 EFFEKKNIHLHFPEGATPKDGPSAGITIVTAILSVLTGRQVRQDIAMTGEVTITGDVLAI 711
Query: 762 GGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GGVK+K++ AHR GI+ VILP+ N D ++P+ V ++ I AK +DV + F
Sbjct: 712 GGVKEKVIGAHRAGIREVILPDDNRMDESDIPSEVAKNMTIHFAKTYDDVEKLVF 766
>gi|389690971|ref|ZP_10179864.1| ATP-dependent protease La [Microvirga sp. WSM3557]
gi|388589214|gb|EIM29503.1| ATP-dependent protease La [Microvirga sp. WSM3557]
Length = 808
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/793 (41%), Positives = 463/793 (58%), Gaps = 82/793 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ A+D E I+ G A L L ++ P G V V++EG R V+ +
Sbjct: 61 TQIDATDDDPSTEAIY--KVGTLANVLQL---LKLPDGTVK--VLVEGASRAQVKAYTRT 113
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVL 146
YY A +L PD + + +A A ++S E K + +V+
Sbjct: 114 DEYYEAEAEAL-------------PDSLGDQVEAEALARSVVSEFENYVKLNKKVSPEVV 160
Query: 147 LETVPIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
I KLAD + I ++ +L++ + RL K +++ + ++V ++I
Sbjct: 161 TAVTQIDEPAKLADTIASHLAIKIADKQAILETPTVAQRLEKVLGMMESEISVLQVEKRI 220
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
+V+ Q+ K+Q+E+ L +QM+AI++ELGD D+ D+L LE K++ +
Sbjct: 221 RTRVKRQMEKTQREYYLNEQMKAIQKELGD-DEGRDELAELEEKIEKTKFTKEAREKAMG 279
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL++L++M P T R YL+ + +PW + S+ + DLKAA++ LD+DHYGL +VK+
Sbjct: 280 ELKKLRQMSPMSAEATVVRNYLDWLLGIPWNRRSK-MKKDLKAAQDLLDADHYGLDKVKE 338
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
RI+EYLAV++ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DE++IR
Sbjct: 339 RIVEYLAVQQRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDESEIR 398
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIGSMPG++I +++ NP++LLDEIDK G D RGDP++ALLEVLDPEQN TF
Sbjct: 399 GHRRTYIGSMPGKIIQSMRKAKTSNPLILLDEIDKMGMDFRGDPSAALLEVLDPEQNSTF 458
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
NDHYL V +DLS V+FV TAN IP PLLDRMEVI + GYT EEK IA HLIP +
Sbjct: 459 NDHYLEVDYDLSNVMFVTTANTLN-IPAPLLDRMEVIRIAGYTEEEKAEIARTHLIPSAM 517
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+HGL + +I + + ++I+RYTREAGVRNLER +A L R A +E +
Sbjct: 518 QKHGLAEKEWKIGDEALLMLIRRYTREAGVRNLEREIANLVRKAV-------KEILISKV 570
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPR 623
K V EV + +P + LGPPR
Sbjct: 571 KTV----------------EVTTDNLP--------------------------EFLGPPR 588
Query: 624 FDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIAL 683
+ E AE G GL WT GGE+ +E M GKG++ +TG L DV+KES A
Sbjct: 589 YRYGE-AETEDMVGAVTGLAWTEVGGELLTIEGIMMPGKGKMTVTGNLRDVMKESISAAA 647
Query: 684 TWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVR 743
++VR+RA D + L RDIH+H P GA PKDGPSAG+ + TA+VS+ + VR
Sbjct: 648 SYVRSRALDFGVEPP----LFDRRDIHVHVPEGATPKDGPSAGIAMATAIVSVITAIPVR 703
Query: 744 ADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEII 803
D AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL ++PA+V LEI+
Sbjct: 704 RDIAMTGEVTLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPASVKNGLEIV 763
Query: 804 LAKRMEDVLEQAF 816
M+ VL+ A
Sbjct: 764 PVSMMDQVLQHAL 776
>gi|420334606|ref|ZP_14836228.1| ATP-dependent protease La [Shigella flexneri K-315]
gi|391268297|gb|EIQ27225.1| ATP-dependent protease La [Shigella flexneri K-315]
Length = 784
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPIIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|163784255|ref|ZP_02179175.1| Lon protease [Hydrogenivirga sp. 128-5-R1-1]
gi|159880478|gb|EDP74062.1| Lon protease [Hydrogenivirga sp. 128-5-R1-1]
Length = 727
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 304/635 (47%), Positives = 424/635 (66%), Gaps = 59/635 (9%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ + +I +E +L+++D RL K +L+ + + + + +KI Q+ K
Sbjct: 145 RLADLVASILDIPSKEAQEILETIDPVERLRKVHDLLLKEVGLLEIQQKIRNSAREQMEK 204
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
Q+E+ LRQQ++AI+EELG+ D+ ++++ +K++ AGMP ++ K QK+L+RL+KM P
Sbjct: 205 DQREYFLRQQIKAIQEELGEKDERQEEVEEYTKKIEEAGMPEDVKKEAQKQLKRLEKMHP 264
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
+ R YL+ + +LPW K +++ L+LK A++ L+ DHY L +VK+RIIEYLAV+K
Sbjct: 265 DSAEASVIRTYLDWLVELPWNKRTKD-KLNLKRAEKILNEDHYDLEKVKERIIEYLAVQK 323
Query: 334 LKPDARG--PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIG 391
LK P+LCFVGPPGVGKTSL SIA ALGRKF RI+LGGV+DEA+IRGHRRTY+G
Sbjct: 324 LKKGKGIKGPILCFVGPPGVGKTSLGKSIARALGRKFTRIALGGVRDEAEIRGHRRTYVG 383
Query: 392 SMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVP 451
+MPGR+I LK+VG NPV++LDE+DK SD RGDPASALLEVLDPEQNK F D YL VP
Sbjct: 384 AMPGRIIQALKQVGTKNPVIMLDEVDKLASDFRGDPASALLEVLDPEQNKEFVDLYLGVP 443
Query: 452 FDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSE 511
F+LS+V+F+ TANR IP PLLDRMEVI +PGY+ EEKL IA ++LIP+ L + GL +
Sbjct: 444 FNLSEVMFICTANRIDTIPRPLLDRMEVIRIPGYSEEEKLHIAKKYLIPKQLKETGLKPK 503
Query: 512 FLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGS 571
+++ ++ ++ +I+ YTREAGVR+LER + + R A ++A
Sbjct: 504 YVEFTDSGLQFLIRGYTREAGVRSLERKINEVLRKIAKEIA------------------- 544
Query: 572 PLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD-DREAA 630
L R ++IT LV +K LG P + ++E
Sbjct: 545 -LTGKR----------------------KKYKITKTLV------KKFLGAPLYTPEKEKK 575
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARA 690
+ + G+ GL WT GGEV +EAT M GKG+L LTG LGDV+KESA AL++V++++
Sbjct: 576 DEI---GVVQGLAWTEVGGEVLKIEATRMPGKGQLILTGSLGDVMKESAMTALSFVKSKS 632
Query: 691 TDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTG 750
+ + +ED + D+H+H PAGA+PKDGPSAG+ + TAL SLF++K V +D AMTG
Sbjct: 633 KNYCIDSED----FKKYDVHVHVPAGAIPKDGPSAGIAITTALFSLFTQKPVSSDVAMTG 688
Query: 751 EMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERN 785
E+TLRG VLPVGG+K+KILAA R GIK VILP+ N
Sbjct: 689 EITLRGHVLPVGGLKEKILAAKRAGIKTVILPKGN 723
>gi|404493312|ref|YP_006717418.1| ATP-dependent Lon protease (La) [Pelobacter carbinolicus DSM 2380]
gi|77545368|gb|ABA88930.1| ATP-dependent Lon protease (La) [Pelobacter carbinolicus DSM 2380]
Length = 801
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 310/756 (41%), Positives = 460/756 (60%), Gaps = 74/756 (9%)
Query: 66 GRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKAT 125
GR+ + + R ELS A + +L + E+ + +++LS++ A
Sbjct: 100 GRIDHWASADECIRVEFTELSDAEVVENAELEALLRSVCELFET-----YVSLSKKIPA- 153
Query: 126 AMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSK 185
E+ + + Q G +L+D A + +E+ +L VD RL +
Sbjct: 154 --EVAASVSATQAPG-------------RLSDTVAAHLSLRVDEKQELLALVDPIERLER 198
Query: 186 ATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALE 245
L+ R ++ + + +KI +V+GQ+ +SQKE+ L +QMRAI++ELG++D+ + +L LE
Sbjct: 199 LITLLAREVEILEIEKKIRSRVKGQMERSQKEYYLNEQMRAIQKELGESDEFKIELKELE 258
Query: 246 RKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLK 305
++Q A M + + ELR+L+ M P T R Y++ +A +PW+K + + D+
Sbjct: 259 DRIQQASMTKDAQERAMAELRKLRMMSPTSAEATVVRNYVDWLASVPWKKKTRD-RRDMV 317
Query: 306 AAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALG 365
A++ L++DHYGL +VK+RI+EYLAV+ L +GP+LC VGPPGVGKTSL SIA ALG
Sbjct: 318 YAEKILEADHYGLEKVKERILEYLAVQALVKKIKGPILCLVGPPGVGKTSLGKSIARALG 377
Query: 366 RKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRG 425
RKF RISLGG++DEA+IRGHRRTYIG+MPG+++ +++V V NPV LLDEIDK SD RG
Sbjct: 378 RKFARISLGGLRDEAEIRGHRRTYIGAMPGKIVQNMRKVAVKNPVFLLDEIDKVSSDFRG 437
Query: 426 DPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGY 485
DP+SALLEVLDPEQN TF DHY+ V +DLS V+F+ATAN I PLLDRMEVI + GY
Sbjct: 438 DPSSALLEVLDPEQNGTFGDHYMEVEYDLSDVMFIATANSMHSIARPLLDRMEVIRIEGY 497
Query: 486 TPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALAR 545
T +EK+ IA ++L+ + + HGL ++ L ++ + +I+ YTREAGVRNLER +A + R
Sbjct: 498 TEDEKVNIAQKYLVEKQIKAHGLNAKGLNFQDSAIYAIIRSYTREAGVRNLEREIANICR 557
Query: 546 AAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
A +V L+ G +VE
Sbjct: 558 KVARQVV-------------------------LSKGKKVEFN------------------ 574
Query: 606 SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGEL 665
+D +++ LG PR+ + E + G++ GL WT GGE+ +E + + G G+L
Sbjct: 575 ----LDADAVKEFLGVPRY-EHGIKEEDSCVGMATGLAWTEVGGELLTIETSILPGHGKL 629
Query: 666 HLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSA 725
+TG+LG+V++ESA+ AL+++R+R +LQL + DIHIH P GA+PKDGPSA
Sbjct: 630 TVTGKLGEVMQESAKAALSYIRSRWEELQLEK----DFYHKIDIHIHVPEGAIPKDGPSA 685
Query: 726 GVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERN 785
G+T+ TAL S + + V + AMTGE+TLRG VLP+GG+K+K+LAA R GI RV++P N
Sbjct: 686 GITMATALASALTGREVDRNLAMTGEITLRGRVLPIGGLKEKLLAAKRAGITRVLIPAEN 745
Query: 786 LKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCP 821
K+L +VP +L++LE++ M++VLEQ + P
Sbjct: 746 KKNLEDVPETILSALEVLPVSHMDEVLEQGLKMSSP 781
>gi|332160751|ref|YP_004297328.1| DNA-binding ATP-dependent protease La [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|386309495|ref|YP_006005551.1| ATP-dependent protease La [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418242375|ref|ZP_12868887.1| DNA-binding ATP-dependent protease La [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
gi|433550571|ref|ZP_20506615.1| ATP-dependent protease La [Yersinia enterocolitica IP 10393]
gi|318604631|emb|CBY26129.1| ATP-dependent protease La Type I [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664981|gb|ADZ41625.1| DNA-binding ATP-dependent protease La [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|351778209|gb|EHB20376.1| DNA-binding ATP-dependent protease La [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
gi|431789706|emb|CCO69655.1| ATP-dependent protease La [Yersinia enterocolitica IP 10393]
Length = 784
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 330/767 (43%), Positives = 459/767 (59%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEME-----QVEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE M E E + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPVMDDREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLASLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDVTERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIMSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + N L D +E+ G++
Sbjct: 544 LEREISKLCRKA--------------------------VKNLLMDKTVKHIEIT--GDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L+ LG + D A RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P+ N +DL E+P V+A LEI KR++DVL A +
Sbjct: 727 HRGGIKVVLIPDDNKRDLEEIPDNVIADLEIHPVKRIDDVLAIALQN 773
>gi|270263572|ref|ZP_06191841.1| ATP-dependent protease La [Serratia odorifera 4Rx13]
gi|333925891|ref|YP_004499470.1| anti-sigma H sporulation factor LonB [Serratia sp. AS12]
gi|333930844|ref|YP_004504422.1| anti-sigma H sporulation factor LonB [Serratia plymuthica AS9]
gi|386327715|ref|YP_006023885.1| anti-sigma H sporulation factor LonB [Serratia sp. AS13]
gi|270042456|gb|EFA15551.1| ATP-dependent protease La [Serratia odorifera 4Rx13]
gi|333472451|gb|AEF44161.1| anti-sigma H sporulation factor, LonB [Serratia plymuthica AS9]
gi|333489951|gb|AEF49113.1| anti-sigma H sporulation factor, LonB [Serratia sp. AS12]
gi|333960048|gb|AEG26821.1| anti-sigma H sporulation factor, LonB [Serratia sp. AS13]
Length = 808
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 326/765 (42%), Positives = 460/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE I E EQ + Q +
Sbjct: 108 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPAIDEREQEVLVRTAINQFEGY 165
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 166 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLSDKQSVLE 209
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 210 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 269
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 270 DAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPW-N 328
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 329 ARSKVKKDLIKAQEVLDIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 388
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 389 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 448
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 449 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 507
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ L+++ L L + ++ + +I+ YTREAGVR+
Sbjct: 508 RMEVIRLSGYTEDEKLNIAKQHLLPKQLERNALKKGELTVDDSAITGIIRYYTREAGVRS 567
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + + L+D ++
Sbjct: 568 LEREISKLCRKA---------------------VKTLLMDKKIKH--------------- 591
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG R D A RV G GL WT GG++
Sbjct: 592 ------------IEINGDNLKDYLGVQRVDYGRADTENRV---GQVTGLAWTEVGGDLLT 636
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H
Sbjct: 637 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKLGINA----DFYEKRDIHVHV 692
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 693 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 752
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A L+I +R+++VL A +
Sbjct: 753 GGIKTVLIPYENKRDLEEIPDNVIADLDIHPVQRIDEVLNLALQN 797
>gi|71729633|gb|EAO31737.1| Peptidase S16, ATP-dependent protease La [Xylella fastidiosa Ann-1]
Length = 823
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/780 (42%), Positives = 471/780 (60%), Gaps = 67/780 (8%)
Query: 43 IHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMT 102
+ H G A+ L L ++ P G T V++EGL R SV ++ +L
Sbjct: 66 VDLHAIGTYAQVLQL---LKLPDG--TIKVLVEGLTRVSVDQVVEHD-------GALRGC 113
Query: 103 KIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKV-LLETVP----IHKLAD 157
IE+ ++ R+ +A L+S+ EQ KT + LL+T+ +LAD
Sbjct: 114 GIEIASTQE-----REEREIEAIVRSLLSLFEQYVKTNRKLPPELLQTLSGIDDPGRLAD 168
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
A + + +L+++++ RL LVD + ++ ++I +V+ Q+ KSQ+E
Sbjct: 169 TIAAHLSVRLAHKQRLLETIEIGDRLEILIGLVDGEIDVQQMEKRIRGRVKSQMEKSQRE 228
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELGD DD +L L RK+ GMP ++ + EL +LK+M P
Sbjct: 229 YYLNEQMKAIQKELGDFDDLPSELEELARKIAEIGMPKSVQSKAKSELNKLKQMSPMSAE 288
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
R YL+ + +PW K ++ + DLK A+ LD DHYGL +VK+RI+EYLAV+
Sbjct: 289 AAVVRNYLDWLLGVPWRKCTK-VRKDLKVAQSTLDDDHYGLDKVKERILEYLAVQSRVKQ 347
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
RGP+LC VGPPGVGKTSLA SIA A RKF+R+SLGGV+DEA++RGHRRTY+GSMPGR+
Sbjct: 348 MRGPILCLVGPPGVGKTSLAQSIAKATNRKFVRMSLGGVRDEAEVRGHRRTYVGSMPGRV 407
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+ L +VG NP+ +LDEIDK D RGDP++ALLEVLDPEQN FNDHYL+V DLS+V
Sbjct: 408 VQNLNKVGSKNPLFVLDEIDKMAMDFRGDPSAALLEVLDPEQNNAFNDHYLDVDLDLSEV 467
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N IP PLLDRMEVI +PGYT +EKL IA R+L+P+ + +GL E L I E
Sbjct: 468 MFVATSNSLN-IPGPLLDRMEVIRIPGYTEDEKLNIATRYLVPKQIRANGLAVEELAIGE 526
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
++ +++ YTRE+GVRNLER ++ + R K++ +G
Sbjct: 527 DAIRDIVRYYTRESGVRNLEREISKICRKIV---------------KEIALVG------- 564
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
V P + + + F +TS LEK LG FD AE G
Sbjct: 565 ----------VKPFAKKSTKSKVLFAVTS------KNLEKYLGVRCFDFGR-AEEANEIG 607
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+ GL WT GG++ +E+T + GKG L LTGQLG V+KESA ALT VR+RA +
Sbjct: 608 LVTGLAWTEVGGDLLQIESTLVPGKGNLILTGQLGSVMKESASAALTVVRSRADRFCI-- 665
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
++ L +D+H+H P GA PKDGPSAG+ +VT+LVS+ ++ VRAD AMTGE+TLRG
Sbjct: 666 --DVDFLHNQDVHLHVPDGATPKDGPSAGIAMVTSLVSMLTKVPVRADVAMTGEITLRGR 723
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
V +GG+K+K+LAA R GI+ V++PE N +DL ++PA V +L I+ K +++VL+ A E
Sbjct: 724 VSVIGGLKEKLLAALRGGIRTVLIPEGNRRDLADIPANVTRALTIVPVKWIDEVLDLALE 783
>gi|421495379|ref|ZP_15942665.1| ATP-dependent protease La [Aeromonas media WS]
gi|407185604|gb|EKE59375.1| ATP-dependent protease La [Aeromonas media WS]
Length = 784
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/664 (46%), Positives = 425/664 (64%), Gaps = 55/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + E++ +L+ + R+ +++ + ++V ++I +V+ Q+ K
Sbjct: 164 RLADTMAAHMPLKLEDKQKVLEIASVSERIEFLMAMMESEIDLLQVEKRIRSRVKKQMEK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELG+ +D D+ AL RK+ AGMP + + EL +LK M P
Sbjct: 224 SQREYYLNEQMKAIQKELGELEDSPDEFEALNRKIDEAGMPDDAREKALAELAKLKMMSP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + +PW KA ++ DL A+E LDSDHYGL +VK RI+EYLAV+
Sbjct: 284 MSAEATVVRSYVDWMVQVPW-KARSKVKKDLAKAQEVLDSDHYGLDKVKDRILEYLAVQA 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 343 RVNKLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSM 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG+LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN +FNDHYL V +D
Sbjct: 403 PGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSSFNDHYLEVDYD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + + ++GL +
Sbjct: 463 LSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLLAKQIQRNGLKESEI 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
I ++ + VI+ YTREAGVR+LER ++ + R A ++ L
Sbjct: 522 TIEDSALIGVIRYYTREAGVRSLEREISKICRKAVKRI---------------------L 560
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LD + ++V++ L++ LG RFD +A ++
Sbjct: 561 LDKSIKH---------------------------VLVNQENLKEFLGVQRFDYGKATDQN 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG++ +E T M GKG+L TG LGDV++ES Q A+T VRARA L
Sbjct: 594 QV-GQVCGLAWTEVGGDLLTIETTNMPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEKL 652
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
++ A + + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+T
Sbjct: 653 RINA----DFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVRADVAMTGEIT 708
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAAHR GIKRV++P+ N +DL E+P V LEI + +++VL
Sbjct: 709 LRGEVLPIGGLKEKLLAAHRGGIKRVLIPKENERDLEEIPDNVKQDLEIYPVRWIDEVLA 768
Query: 814 QAFE 817
A +
Sbjct: 769 LALQ 772
>gi|92117750|ref|YP_577479.1| ATP-dependent protease La [Nitrobacter hamburgensis X14]
gi|91800644|gb|ABE63019.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Nitrobacter hamburgensis X14]
Length = 807
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 330/795 (41%), Positives = 466/795 (58%), Gaps = 86/795 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + + I+ G A L L ++ P G V V++EGL R V + S R
Sbjct: 61 TQKNASDDDPEPDSIY--KIGTLASVLQL---LKLPDGTVK--VLVEGLDRARVTKYSDR 113
Query: 89 GTYYTARISSL---EMTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRT 143
YY A +L + + +E E + + DF + + K + E++ V++
Sbjct: 114 TDYYEAEAVALADTDTSSVEAEALARSVVSDFESYVKLNKKISPEVVGVVQA-------- 165
Query: 144 KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
KL D + ++ +L+++ RL K L++ + ++V ++I
Sbjct: 166 -----ITDFAKLGDTVASHLAAKIADRQGILETLSATARLEKVLGLMESEISVLQVEKRI 220
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
+V+ Q+ K+Q+E+ L +QM+AI++ELGD D+ D+L LE K+ + + Q
Sbjct: 221 RSRVKRQMEKTQREYYLNEQMKAIQKELGD-DEGRDELADLEEKIAKTKLSKEAREKAQH 279
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL++L++M P T R YL+ + +PW K S+ + DL AA+E LD+DHYGL +VK
Sbjct: 280 ELKKLRQMSPMSAEATVVRNYLDWLISIPWGKKSK-VKKDLNAAQEVLDADHYGLEKVKD 338
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
RI+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IR
Sbjct: 339 RIVEYLAVQSRANKLTGPILCLVGPPGVGKTSLGKSIARATGREFVRVSLGGVRDEAEIR 398
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP+SALLEVLDPEQN TF
Sbjct: 399 GHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDKMGADFRGDPSSALLEVLDPEQNSTF 458
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
NDHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EK+ IA +HLIP L
Sbjct: 459 NDHYLEVDYDLSNVMFLTTANTLN-IPGPLMDRMEIIRIAGYTENEKVEIARKHLIPNSL 517
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+HGL S+ I + + L+I+RYTREAGVRNL+R L+ LAR A +E L
Sbjct: 518 TKHGLDSKEWSIDDDSLLLIIRRYTREAGVRNLQRELSTLARKAV-------KELMLSKR 570
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP- 622
K V V E +E+ LG P
Sbjct: 571 KSVK------------------------------------------VTEKAVEEFLGVPK 588
Query: 623 -RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
R+ + E+ ++V G+ GL WT+ GGE+ +E+ M GKG + +TG L DV+KES
Sbjct: 589 YRYGEIESDDQV---GVVTGLAWTDVGGELLTIESVMMPGKGRMTVTGNLRDVMKESISA 645
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA + L + RDIH+H P GA PKDGPSAGV + T +VS+ +
Sbjct: 646 AASYVRSRAITFGIEPP----LFERRDIHVHVPEGATPKDGPSAGVAMATTIVSVLTGIP 701
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
+R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++P+ N KDL E+ A+ L+
Sbjct: 702 IRHDIAMTGEITLRGRVLPIGGLKEKLLAAARGGIKTVLIPDENAKDLTEISDAIKGGLD 761
Query: 802 IILAKRMEDVLEQAF 816
II RM++V+ +A
Sbjct: 762 IIPVARMDEVISRAL 776
>gi|85058651|ref|YP_454353.1| DNA-binding ATP-dependent protease La [Sodalis glossinidius str.
'morsitans']
gi|84779171|dbj|BAE73948.1| ATP-dependent protease Lon [Sodalis glossinidius str. 'morsitans']
Length = 784
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 323/761 (42%), Positives = 461/761 (60%), Gaps = 75/761 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EGL R ++ELS G +++A + + E+++ EQ+ QF+
Sbjct: 84 PDGTVK--VLVEGLTRARIKELSDSGDHFSAEVDYFDAP--ELDEREQEVLVRTAINQFE 139
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
S ++ +K L ++ +LAD A + ++ +L+ D+ R
Sbjct: 140 -------SYIKLNKKIPPEVLTSLNSIDDAARLADTIAAHMPLKLSDKQSVLEMADVTER 192
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ DD D+
Sbjct: 193 LEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMDDAPDENE 252
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
AL+RK+++A MP + + EL++L+ M P T R Y++ + +PW A ++
Sbjct: 253 ALKRKIEAAKMPQEAREKTEAELQKLRMMSPMSAEATVVRGYIDWMLSVPWH-ARSKVKK 311
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
DL A+E LD DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTSL SIA
Sbjct: 312 DLVKAQETLDKDHYGLERVKDRILEYLAVQSRISKIKGPILCLVGPPGVGKTSLGQSIAK 371
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDEIDK SD
Sbjct: 372 ATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMSKVGVKNPLFLLDEIDKMSSD 431
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLDRMEVI L
Sbjct: 432 MRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLDRMEVIRL 490
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GYT +EKL IA +HL+P+ L+++ L L + ++ + +I+ YTREAGVR+LER ++
Sbjct: 491 SGYTEDEKLNIARQHLLPKQLERNALKKGELTVEDSALVGIIRYYTREAGVRSLEREISK 550
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
L R A ++ + M +ST +
Sbjct: 551 LCRKA--------------------------------------VKTLLMDKSTKHI---- 568
Query: 603 RITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
++ L+ LG RFD E R+ G GL WT GG++ +E +
Sbjct: 569 ------IISADNLKDFLGVQRFDYGRAEGENRI---GQVTGLAWTEVGGDLLTIETACVT 619
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHFPAGAV 718
GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H P GA
Sbjct: 620 GKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHVHVPEGAT 673
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+ + TALVS + V+A+ AMTGE+TLRG VLP+GG+K+K+LAAHR GIK
Sbjct: 674 PKDGPSAGIAMCTALVSCLTGNPVKANVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKT 733
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
V++P N +DL ++PA V+ L+I +R++ VL A +
Sbjct: 734 VLIPFENKRDLEDMPANVINDLDIHPVQRIDKVLNLALQNA 774
>gi|291288693|ref|YP_003505509.1| ATP-dependent protease La [Denitrovibrio acetiphilus DSM 12809]
gi|290885853|gb|ADD69553.1| ATP-dependent protease La [Denitrovibrio acetiphilus DSM 12809]
Length = 768
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 323/819 (39%), Positives = 487/819 (59%), Gaps = 75/819 (9%)
Query: 1 MLLLIRQWAPLFL----KVSGVG-GDSSERASKVQVGASDGKNQQEVIHWHNRGVAARAL 55
M++ +P+F+ V+ V +SS + + D ++ E+ ++ GV A+ L
Sbjct: 15 MVIFPYMISPVFVGRDKSVNAVDIAESSTKHIFFALQKDDELDEPEMDDLYSTGVVAKLL 74
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDF 115
+ ++ P G V +V EG+ R + ++ G A +S LE +++ +
Sbjct: 75 QV---LKLPDGTVKLLV--EGVDRARLLSVADEGDCLFANVSILEDEEVDAAEEP----- 124
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRT-KVLLETVPIHKLADIFVASFEISFEEQLVML 174
AL +K A + E +K + + E +LA A+ + EE +L
Sbjct: 125 -AL---YKMLAESFNTYAEVSKKINDNILQSIAEIDETDRLAYSIAANMPMRNEEHQAVL 180
Query: 175 DSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDN 234
+ D R+ K ELV +++ ++ +I QKV+ Q+SK+QKE+ L +Q++AI EELG +
Sbjct: 181 EMDDSTARVEKIIELVQTYIELTKMDSRIRQKVKNQMSKAQKEYYLGEQVKAINEELGKD 240
Query: 235 DDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWE 294
DD + D+ +E K+ S+ + + + ++E ++LK M P T R YL+ + +PW
Sbjct: 241 DDFKADMDEIEEKINSSNLSDTVKERAEREYKKLKLMSPMSAEATVVRNYLDWLLSMPWG 300
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKT 354
+++ DL+L+ A++ L+ DH+GL + K+RI+E+LAV+K+ + +GP++CF GPPGVGKT
Sbjct: 301 VFTDD-DLELENAEKILNRDHFGLEKPKERILEFLAVKKIAENIKGPIICFTGPPGVGKT 359
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
SLA SIA A+ RKF+R+SLGG++DEA+IRGHR+TYIGSMPG+++ LK+ G NPV LLD
Sbjct: 360 SLAKSIAEAMNRKFVRMSLGGMRDEAEIRGHRKTYIGSMPGKILQSLKKAGSSNPVFLLD 419
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
EIDK G+D RGDP+SALLEVLDPEQN TF DHYL + +DLSKV F+ TAN IP PLL
Sbjct: 420 EIDKLGADFRGDPSSALLEVLDPEQNNTFMDHYLELEYDLSKVFFITTANNVHNIPQPLL 479
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRMEVI + GYT EKL IA L+P+++ +H + E + I + + +I+ YT+EAGVR
Sbjct: 480 DRMEVIHVSGYTEREKLEIAKMFLVPKMIKEHNV-QERVNIADTAILDIIRGYTKEAGVR 538
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGES 594
NLER +A++ R K+ ++ P K V
Sbjct: 539 NLEREIASVVRKCVKKLVQK------PDQKSVR--------------------------- 565
Query: 595 THEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFV 654
V++A +EK LG P+F +E V G++ GL WT +GG++ +
Sbjct: 566 ---------------VNKATIEKFLGIPKF-RQEDIPNVVEIGVATGLAWTPYGGDILQI 609
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFP 714
E +GKG + +TG+LGDV++ES + A T V++ A+ ++ A DIH+H P
Sbjct: 610 EVAVSKGKGSMQITGKLGDVMQESVKTAFTVVKSHASKFKIPAAR----FSETDIHVHVP 665
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
GAVPKDGPSAG+TL TA++S S ++V+ D AMTGE+TLRG VL +GG+K+K+LAAHR
Sbjct: 666 EGAVPKDGPSAGITLATAIMSALSGRQVKCDIAMTGEITLRGRVLAIGGIKEKVLAAHRA 725
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
G+K VILP+ N KDL E+PA V + L + +E+V E
Sbjct: 726 GVKEVILPKANDKDLTEIPADVRNIVRFHLVENIEEVFE 764
>gi|16759430|ref|NP_455047.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29142798|ref|NP_806140.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56414394|ref|YP_151469.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197363314|ref|YP_002142951.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|213160792|ref|ZP_03346502.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213852301|ref|ZP_03381833.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|378960580|ref|YP_005218066.1| Lon protease [Salmonella enterica subsp. enterica serovar Typhi
str. P-stx-12]
gi|25289976|pir||AE0558 Lon protease [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16501721|emb|CAD08909.1| Lon protease [Salmonella enterica subsp. enterica serovar Typhi]
gi|29138430|gb|AAO70000.1| Lon protease [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|56128651|gb|AAV78157.1| Lon protease [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|197094791|emb|CAR60324.1| Lon protease [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|374354452|gb|AEZ46213.1| Lon protease [Salmonella enterica subsp. enterica serovar Typhi
str. P-stx-12]
Length = 784
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|383454040|ref|YP_005368029.1| ATP-dependent protease La [Corallococcus coralloides DSM 2259]
gi|380733240|gb|AFE09242.1| ATP-dependent protease La [Corallococcus coralloides DSM 2259]
Length = 817
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/781 (42%), Positives = 469/781 (60%), Gaps = 80/781 (10%)
Query: 41 EVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE 100
++ H+ G HL + + P G T V++EG+ R V++ ++ + +E
Sbjct: 79 DIFHFGTIG------HLIQLLPLPDG--TMKVLVEGVRRAKVKKFHPNDAFFMVEVDEVE 130
Query: 101 MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KL 155
EQ+E+ + AL R SV E K R ++L++ I +L
Sbjct: 131 ------EQLEKSVELEALVRSVH-------SVFEAFVKLNKRIPPEMLMQVASIDDPARL 177
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
AD VA + ++ +L++ RL K EL+ ++ ++V +KI +V+ Q+ K+Q
Sbjct: 178 ADTIVAHLSLKLNDKQALLETESPAKRLEKLYELMQGEIEILQVEKKIRTRVKKQMEKTQ 237
Query: 216 KEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQ 275
KE+ L +QM+AI++ELG+ D+ ++++ +E K+++ M V+KEL++L+ M P
Sbjct: 238 KEYYLNEQMQAIQKELGERDEFKNEIQEIEEKLKNKRMSKEATLKVKKELKKLRMMSPMS 297
Query: 276 PGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK 335
T R Y++ I LPW +++ LD+ A+ L+ DHYGL + K+RI+EYLAV++L
Sbjct: 298 AEATVVRNYIDWIISLPWYDETQD-RLDVTEAERVLNEDHYGLKKPKERILEYLAVQQLV 356
Query: 336 PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPG 395
+GPVLCFVGPPGVGKTSLA SIA A GRKF+R+SLGGV+DEA+IRGHRRTYIG+MPG
Sbjct: 357 KKLKGPVLCFVGPPGVGKTSLARSIARATGRKFVRLSLGGVRDEAEIRGHRRTYIGAMPG 416
Query: 396 RLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 455
+LI LK+ G NPV LLDEIDK +D RGDP++ALLEVLDPEQN FNDHYL++ +DLS
Sbjct: 417 KLIQSLKKAGSNNPVFLLDEIDKMSTDFRGDPSAALLEVLDPEQNHNFNDHYLDLDYDLS 476
Query: 456 KVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI 515
KV+F+ TAN IP PL DRMEVI + GYT EKL IA R+LIP+ + +GL + I
Sbjct: 477 KVMFICTANTMHNIPGPLQDRMEVIRIAGYTEPEKLSIARRYLIPKEQEANGLSDLKIDI 536
Query: 516 PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLD 575
+K ++ RYTRE+GVR+LER + + R A +DV + G L
Sbjct: 537 TNDALKTIVHRYTRESGVRSLEREIGGVFRKIA---------------RDVLKNGKRDL- 580
Query: 576 NRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAA 635
+ VD K LG PRF AER
Sbjct: 581 --------------------------------IEVDRKQAMKFLGTPRF-RYGVAEREDQ 607
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
GI GL WT GGE+ EAT+M GKG+L +TG+LG+V++ESAQ A+++VR+RA +
Sbjct: 608 VGIVTGLAWTELGGEILTTEATSMPGKGKLIITGKLGEVMQESAQAAMSYVRSRAERFGI 667
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
+ + DIH+H P GA+PKDGPSAGVT+ TALVS +R VR D AMTGE+TLR
Sbjct: 668 ----DRKVFENYDIHVHLPEGAIPKDGPSAGVTMATALVSALTRVPVRKDVAMTGEITLR 723
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
G VLP+GG+K+K LAAHR GIK V++P+ N KDL ++P + +L I+ + ++DVL +A
Sbjct: 724 GRVLPIGGLKEKTLAAHRAGIKTVLIPKANKKDLKDIPLKIRKALRIVPVEFVDDVLREA 783
Query: 816 F 816
Sbjct: 784 L 784
>gi|359437261|ref|ZP_09227331.1| ATP-dependent Lon protease [Pseudoalteromonas sp. BSi20311]
gi|358028085|dbj|GAA63580.1| ATP-dependent Lon protease [Pseudoalteromonas sp. BSi20311]
Length = 786
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 324/778 (41%), Positives = 464/778 (59%), Gaps = 88/778 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EME 107
G A L L ++ P G V V++EG R +++E ++ A +E + E E
Sbjct: 72 GTIATVLQL---LKLPDGTVK--VLVEGTQRANIEEFVDNEDFFVANAQFIESDSVNEQE 126
Query: 108 Q-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
Q + Q ++ L+++ M +S +++ + LAD
Sbjct: 127 QDIFIRSALSQFEGYVKLNKKIPPEVMTSVSGIDEPAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E+ +L+ + RL L++ + ++V +KI +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKVPEKQKVLEISSVTERLEYLMALMEGEIDLLQVEKKIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELG+ DD D+ AL+++++ +GMP+ + E +LK M P +
Sbjct: 231 NEQMKAIQKELGEIDDVPDEFEALKKRIEESGMPNEAKEKATAEFNKLKMMSPMSAEASV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + ++PW+K S+ + DL A++ LDSDHYGL +VK+RIIEYLAV++ +G
Sbjct: 291 VRSYIDTLINVPWKKRSK-VKKDLAGAQKILDSDHYGLDKVKERIIEYLAVQQRTNKLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA + GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI
Sbjct: 350 PILCLVGPPGVGKTSLGQSIARSTGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQN 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK +D+RGDPASALLEVLDPEQN F DHYL V +DLS V+FV
Sbjct: 410 MTKVGVKNPLFLLDEIDKMSADMRGDPASALLEVLDPEQNSHFADHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI L GYT +EKL IA HLIP+ + ++GL + ++I ++ +
Sbjct: 470 ATSNSFN-IPGPLLDRMEVIRLAGYTEDEKLNIAKEHLIPKQVKRNGLKEKEVEIADSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVRNLER ++ L R A + ++
Sbjct: 529 IGIIRYYTREAGVRNLEREVSKLCRKAVKNILMEKD------------------------ 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGI 638
T + +D LE+ G RFD E +R+ G
Sbjct: 565 ------------------------TKTVTIDADNLEEYFGVQRFDYGKAEDGDRI---GQ 597
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
GL WT GG++ +E A+ GKG+L TG LGDV++ES Q A+T VR RA +L++
Sbjct: 598 VTGLAWTEVGGDLLTIECAAVPGKGKLTYTGSLGDVMQESIQAAMTVVRNRADELRI--- 654
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ + RDIH+H P GA PKDGPSAG+ +VT LVS + VR+D AMTGE+TLRG V
Sbjct: 655 -NSDFYEKRDIHVHVPEGATPKDGPSAGIAMVTCLVSSLTGNPVRSDVAMTGEITLRGEV 713
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K+LAAHR GIK V++P+ N +DL E+P VLA LEI +++VL+ A
Sbjct: 714 LPIGGLKEKLLAAHRGGIKTVVIPKINERDLKEIPDNVLAGLEIHPVTWIDEVLKLAL 771
>gi|357384548|ref|YP_004899272.1| ATP-dependent protease La type I [Pelagibacterium halotolerans B2]
gi|351593185|gb|AEQ51522.1| ATP-dependent protease La type I [Pelagibacterium halotolerans B2]
Length = 808
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 324/778 (41%), Positives = 457/778 (58%), Gaps = 89/778 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI--------SSLE 100
G A L L ++ P G V V++EGL R ++ Y+ A+ +LE
Sbjct: 78 GTIASVLQL---LKLPDGTVK--VLVEGLHRAKIENYVQTENYFEAQAEALPVEGHDALE 132
Query: 101 MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
+ V + +++ L+++ + + ++ +E+ K LAD
Sbjct: 133 AEALARSAVTEFENYVKLNKKISSEVVAAVTQIEEHSK----------------LADTIA 176
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ + +++ +L + + RL + L++ + ++V +I +V+ Q+ K+Q+E+ L
Sbjct: 177 SHLAVKIQDKQDILATPSVTERLERVLGLMEGEIGVLQVERRIRSRVKRQMEKTQREYYL 236
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI+ ELGD +D ++L LE ++ + + E+++LK+M P T
Sbjct: 237 NEQMKAIQRELGDGEDGTNELQELEDRIAKTKLSKEARQKADGEMKKLKQMSPMSAEATV 296
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +LPW K S+ + DLK A++ L+SDHYGL +VK+RIIEYLAV+ +G
Sbjct: 297 VRNYLDWMLNLPWGKKSK-VKRDLKFAEDVLESDHYGLEKVKERIIEYLAVQSRTGKLKG 355
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSLA SIA A GR+++R+SLGGV+DEA+IRGHRRTYIGSMPG+++
Sbjct: 356 PILCLVGPPGVGKTSLARSIAKATGREYVRMSLGGVRDEAEIRGHRRTYIGSMPGKIVQS 415
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
LK+ G NP+ LLDEIDK G D RGDP+SALLEVLDPEQN TFNDHYL V FDLS V+FV
Sbjct: 416 LKKAGKANPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNSTFNDHYLEVDFDLSDVMFV 475
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
TAN IP PLLDRME+I L GYT EEK I+ RHL+P L +HGL +E ++ + +
Sbjct: 476 TTANTLN-IPGPLLDRMEIIRLSGYTDEEKWEISRRHLMPETLKEHGLKAEEFELLDESL 534
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+L+ +RYTREAGVRNL+R +A L R S KD+ G
Sbjct: 535 QLLTRRYTREAGVRNLKREIANLMRK---------------SVKDILLTGK--------- 570
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAP--GI 638
+VV ++E+ LG PRF E A P G+
Sbjct: 571 -------------------------KKIVVTPELVEEYLGAPRF---RYGEIDAEPQVGV 602
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
GL WT GGE+ +E GKG++ +TG L DV+KES A T+VRARA + +
Sbjct: 603 VTGLAWTAVGGELLTIEGIMSPGKGKMTVTGNLKDVMKESISAAATYVRARALEYGIKPP 662
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
L RDIH+H P GA PKDGPSAG+ + TA+VS+ + VR D AMTGE+TLRG V
Sbjct: 663 ----LFDKRDIHVHVPEGATPKDGPSAGIGMATAIVSVMTGIAVRHDVAMTGEITLRGRV 718
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K+LAA R GIK+V++PE N++DL ++P V LEI+ RM +VLE A
Sbjct: 719 LPIGGLKEKLLAALRGGIKKVLIPEENVRDLKDIPDNVKEGLEIVPVSRMGEVLEHAL 776
>gi|212557509|gb|ACJ29963.1| ATP-dependent protease La [Shewanella piezotolerans WP3]
Length = 766
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 310/666 (46%), Positives = 430/666 (64%), Gaps = 59/666 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + E++ +L+ VD+ R+ +++ + ++V ++I +V+ Q+ K
Sbjct: 145 RLADTMAAHMPLKLEDKQSVLEMVDVGERIEYLMAMMESEIDLLQVEKRIRGRVKKQMEK 204
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELGD D+ D+ +L +K++ A MP + + EL +LK M P
Sbjct: 205 SQREYYLNEQMKAIQKELGDIDESHDEFESLAKKIEEAKMPEEAQEKAKAELNKLKMMSP 264
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y+E + +PW K S+ I DL A++ LD+DH+GL +VK+RI+EYLAV+
Sbjct: 265 MSAEATVVRSYVEWMVSVPWHKRSK-IKRDLAKAQDVLDTDHFGLEKVKERILEYLAVQS 323
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 324 RVKQLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSM 383
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG++I + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TF+DHY+ V +D
Sbjct: 384 PGKVIQKMSKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFSDHYMEVDYD 443
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA +HL+P+ ++++GL ++ +
Sbjct: 444 LSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLLPKQIERNGLKAKEV 502
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ ++ + +I+ YTREAGVR LER L+ + R KV +Q L
Sbjct: 503 TVDDSAIIGIIRYYTREAGVRALERELSKICR----KVVKQ-----------------IL 541
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LD + VE V++ L+ LG R D AE
Sbjct: 542 LDKSI---KHVE------------------------VNQDNLKSFLGVQRC-DYGKAESN 573
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA +
Sbjct: 574 NQIGQVTGLAWTEVGGDLLTIEATSVPGKGKLSYTGSLGDVMQESIQAAMTVVRARAEQM 633
Query: 694 QLVAEDGMN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
G+N + RDIH+H P GA PKDGPSAG + TALVS + VRAD AMTGE
Sbjct: 634 ------GINPDFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRADVAMTGE 687
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+K+K+LAAHR G K V++P+ N +DL E+PA V+A L+I K +E+V
Sbjct: 688 ITLRGEVLPIGGLKEKLLAAHRGGTKVVLIPKENERDLEEIPANVIADLKIYPVKWVEEV 747
Query: 812 LEQAFE 817
L+ A E
Sbjct: 748 LKHALE 753
>gi|24373362|ref|NP_717405.1| ATP-dependent protease La Lon [Shewanella oneidensis MR-1]
gi|24347625|gb|AAN54849.1| ATP-dependent protease La Lon [Shewanella oneidensis MR-1]
Length = 785
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 327/779 (41%), Positives = 468/779 (60%), Gaps = 88/779 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R + + ++ A+ LE +E ++
Sbjct: 72 GTVASILQL---LKLPDGTVK--VLVEGGRRARITRYTQEADFFVAKAEYLESEPLEDKE 126
Query: 109 VE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E Q +I L+++ + +S +++ + LAD
Sbjct: 127 EEVLVRSAIGQFEGYIKLNKKIPPEVLTSLSGIDEAAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ ++ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKLEDKQSVLEMTNIGERLEYLMAMMESEIDLLQVEKRIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ D+ L RK++ A MPS+ + EL +L+ M P T
Sbjct: 231 NEQMKAIQKELGDLDEGHDEFEVLNRKIEEANMPSDAKEKAVAELNKLRMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW + S+ I DL A+E LD+DHYGL +VK RI+EYLAV+ +G
Sbjct: 291 VRSYVDWMTSVPWSQRSK-IKRDLAKAQEVLDTDHYGLEKVKDRILEYLAVQSRVRQLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKVIQK 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + ++++GL + +++ ++ +
Sbjct: 470 ATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLLTKQIERNGLKASEIKVDDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR+LER L+ + R
Sbjct: 529 VGIIRYYTREAGVRSLERELSKICRKV--------------------------------- 555
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+++I + +S V+ V L+ LG RF D AE G
Sbjct: 556 -----VKMILLDKSVKSVT----------VTAENLKSFLGVQRF-DYGKAESNNQIGQVT 599
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L G
Sbjct: 600 GLAWTEVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQL------G 653
Query: 701 MN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+N + RDIH+H P GA PKDGPSAG + TALVS + VR+D AMTGE+TLRG V
Sbjct: 654 INGDFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRSDVAMTGEITLRGEV 713
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LP+GG+K+K+LAAHR GIK V++P+ N +DL E+PA V+A LEI + +++VL+ A E
Sbjct: 714 LPIGGLKEKLLAAHRGGIKLVLIPKENERDLEEIPANVIADLEIRPVRWVDEVLKLALE 772
>gi|123443340|ref|YP_001007314.1| DNA-binding ATP-dependent protease La [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|238788010|ref|ZP_04631806.1| ATP-dependent protease La [Yersinia frederiksenii ATCC 33641]
gi|420257507|ref|ZP_14760264.1| DNA-binding ATP-dependent protease La [Yersinia enterocolitica
subsp. enterocolitica WA-314]
gi|122090301|emb|CAL13167.1| ATP-dependent protease La [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238723958|gb|EEQ15602.1| ATP-dependent protease La [Yersinia frederiksenii ATCC 33641]
gi|404515021|gb|EKA28799.1| DNA-binding ATP-dependent protease La [Yersinia enterocolitica
subsp. enterocolitica WA-314]
Length = 784
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 330/767 (43%), Positives = 459/767 (59%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEME-----QVEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE M E E + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPVMDDREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLASLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDVTERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIMSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + N L D +E+ G++
Sbjct: 544 LEREISKLCRKA--------------------------VKNLLMDKTVKHIEIT--GDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L+ LG + D A RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P+ N +DL E+P V+A LEI KR++DVL A +
Sbjct: 727 HRGGIKVVLIPDDNKRDLEEIPDNVIADLEIHPVKRIDDVLAIALQN 773
>gi|386821516|ref|ZP_10108732.1| ATP-dependent protease La [Joostella marina DSM 19592]
gi|386426622|gb|EIJ40452.1| ATP-dependent protease La [Joostella marina DSM 19592]
Length = 816
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 306/773 (39%), Positives = 460/773 (59%), Gaps = 69/773 (8%)
Query: 41 EVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE 100
E+ + G AR L R ++ P G T V+++G RF ++E++T Y+ A+I L
Sbjct: 97 EIADLNTTGTVARIL---RVLKMPDGNTT--VIIQGKKRFEIEEITTTEPYFNAKIKDLP 151
Query: 101 MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E + +D +F + K A+++I ++ ++ + + F+
Sbjct: 152 ----EEKPANEDEEFTTIIDSIKDLALQII---KESPNIPSEASFAIKNIESNSFLINFI 204
Query: 161 AS-FEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFL 219
+S + +++ +L++ +L+ R + ++ Q + + I KV+ L++ Q+E+
Sbjct: 205 SSNMNLEVKDKQKLLETKNLQERALATLKFMNVEFQKLNLRNDIQSKVQSDLNQQQREYF 264
Query: 220 LRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYT 279
L QQM+ I+EELG E+++ + K + I +H +KEL +L++M PQ Y+
Sbjct: 265 LHQQMKTIQEELG-GVSSEEEIEQMRIKGNKKKWDAKIKEHFEKELAKLQRMNPQVAEYS 323
Query: 280 SSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDAR 339
R YL+L DLPW K S++ DLK A++ LD DHYGL VK+RIIEYLAV KL+ D +
Sbjct: 324 IQRNYLDLFLDLPWNKFSKD-KFDLKRAQKILDRDHYGLEDVKKRIIEYLAVLKLRNDMK 382
Query: 340 GPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLID 399
P+LC GPPGVGKTSL S+A ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR+I
Sbjct: 383 SPILCLYGPPGVGKTSLGKSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQ 442
Query: 400 GLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIF 459
LK+ G NPV +LDEIDK S GDP+SA+LEVLDPEQNK F D++L + +DLSKV+F
Sbjct: 443 SLKKAGTSNPVFILDEIDKLSSSHNGDPSSAMLEVLDPEQNKEFYDNFLEMGYDLSKVMF 502
Query: 460 VATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAM 519
+ATAN PI P L DRME+I + GYT EEK+ I RHL+P+ L +HGL L++ +
Sbjct: 503 IATANNLGPIQPALRDRMEIINVTGYTIEEKVEIGKRHLLPKQLKEHGLKPADLKVGKKE 562
Query: 520 VKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLA 579
++ +++ YTRE+GVR L++ +A + R AA +A +E+ +++DV
Sbjct: 563 LEKIVEGYTRESGVRGLDKQIAKMVRYAAKSIAMEEEYDVKVTTQDV------------- 609
Query: 580 DGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGIS 639
EKVLG R +R+ E G+
Sbjct: 610 ------------------------------------EKVLGVARL-ERDKYENNEVAGVV 632
Query: 640 VGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAED 699
GL WT+ GG++ F+E+ +GKG L +TG LG V+KESA IA+ ++++ A L + E
Sbjct: 633 TGLAWTSVGGDILFIESILSKGKGTLSITGNLGKVMKESATIAMEYIKSNAESLGINPE- 691
Query: 700 GMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVL 759
+ + ++HIH P GA PKDGPSAG+T++T+LVSLF++++V+ AMTGE+TLRG VL
Sbjct: 692 ---VFEKYNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQRKVKKSIAMTGEITLRGKVL 748
Query: 760 PVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
PVGG+K+KILAA R IK +IL N +D++E+ L L M +V+
Sbjct: 749 PVGGIKEKILAAKRARIKELILCNENKRDILEIKEEYLKGLTFHYVNEMSEVI 801
>gi|218549893|ref|YP_002383684.1| DNA-binding ATP-dependent protease La [Escherichia fergusonii ATCC
35469]
gi|422804518|ref|ZP_16852950.1| ATP-dependent protease [Escherichia fergusonii B253]
gi|424817250|ref|ZP_18242401.1| DNA-binding ATP-dependent protease La [Escherichia fergusonii
ECD227]
gi|218357434|emb|CAQ90073.1| DNA-binding ATP-dependent protease La [Escherichia fergusonii ATCC
35469]
gi|324114666|gb|EGC08634.1| ATP-dependent protease [Escherichia fergusonii B253]
gi|325498270|gb|EGC96129.1| DNA-binding ATP-dependent protease La [Escherichia fergusonii
ECD227]
Length = 784
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPYENKRDLEEIPDNVIADLDIHPVKRIEEVLSLALQN 773
>gi|402815461|ref|ZP_10865053.1| Lon protease Lon [Paenibacillus alvei DSM 29]
gi|402506501|gb|EJW17024.1| Lon protease Lon [Paenibacillus alvei DSM 29]
Length = 777
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 313/756 (41%), Positives = 448/756 (59%), Gaps = 79/756 (10%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVE--------QDPDFIALSR 120
T V++EG+ R + E +Y ++ L + + E Q +++ +S+
Sbjct: 87 TIRVLVEGVERAEIVEYVPNDEFYEVQVRVLHEEANQSSETEALMRMALTQFENYVQMSK 146
Query: 121 QFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLK 180
+ + ++ +E+ GR +AD+ + I +++ +L++VD K
Sbjct: 147 KVSPETLASVTDIEEP----GR------------MADVIASHLSIKLKDKQALLETVDSK 190
Query: 181 VRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 240
RL K EL++ + + + +KI Q+V+ Q+ K+QKE+ LR+QM+AI++ELGD + +
Sbjct: 191 ARLHKLLELLNNESEVLEMEKKIGQRVKKQMEKTQKEYYLREQMKAIQKELGDKEGRAGE 250
Query: 241 LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI 300
L +++ P + + + KE+ RL+KM + R Y++ + +PW +E+
Sbjct: 251 AEELRAQLKELDAPDKVREKIGKEIDRLEKMPASSAEGSVIRNYIDWLLQIPWSTMTED- 309
Query: 301 DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSI 360
DLDL A+ L++DHYGL + K+R++EYLAV++L + +GP+LC VGPPGVGKTSLA SI
Sbjct: 310 DLDLGKAESILEADHYGLEKPKERVLEYLAVQQLVKEMKGPILCLVGPPGVGKTSLARSI 369
Query: 361 ASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTG 420
A +LGRKF+RISLGGV+DEA+IRGHRRTY+G+MPGR++ LK G NPVMLLDEIDK
Sbjct: 370 AKSLGRKFVRISLGGVRDEAEIRGHRRTYVGAMPGRIVQALKNAGTMNPVMLLDEIDKMA 429
Query: 421 SDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVI 480
SD RGDPA+ALLEVLDPEQN F+DH++ +P DLS+V+FV TAN IP PLLDRME++
Sbjct: 430 SDFRGDPAAALLEVLDPEQNNAFSDHFVELPVDLSRVLFVTTANAVHNIPRPLLDRMEML 489
Query: 481 ELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNL 540
L GYT EKL IA RHL+P+ + HGL L + E + VI+ YTREAGVR LE+ L
Sbjct: 490 NLSGYTELEKLEIANRHLLPKQKEAHGLKEGQLTVTEEGILQVIREYTREAGVRQLEQQL 549
Query: 541 AALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSN 600
AAL R AA +V + E +E+
Sbjct: 550 AALCRKAAKRV---------------------------------------VSEQVNEIQ- 569
Query: 601 TFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
+D L + LG R+ AE+ G GL WT GG+ +E T +
Sbjct: 570 ---------IDAQQLSEYLGVARY-RYGLAEQDDQIGTVTGLAWTEAGGDTLNIEVTVVP 619
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPK 720
G G+L LTG+LGDV+KESAQ A +++R+++ +L + L DIH+H P GA+PK
Sbjct: 620 GSGKLQLTGKLGDVMKESAQAAFSYIRSKSAQWELEPDFHEKL----DIHVHVPEGAIPK 675
Query: 721 DGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVI 780
DGPSAG+T+ TALVS F+ + V D AMTGE+TLRG VLP+GG+K+K LAA R GIK V+
Sbjct: 676 DGPSAGITIATALVSAFTNRYVSKDVAMTGEITLRGRVLPIGGLKEKSLAALRAGIKTVL 735
Query: 781 LPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
P N +DL ++P V L I M++VL A
Sbjct: 736 FPHDNERDLADIPDTVRQELTFIPVSHMDEVLRHAL 771
>gi|189423560|ref|YP_001950737.1| ATP-dependent protease La [Geobacter lovleyi SZ]
gi|189419819|gb|ACD94217.1| ATP-dependent protease La [Geobacter lovleyi SZ]
Length = 772
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 312/654 (47%), Positives = 422/654 (64%), Gaps = 65/654 (9%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+L+D+ + + +L++VD RL K + +Q ++V ++ ++ ++ K
Sbjct: 165 RLSDLVALYVNLPQSDLQELLETVDPLERLKKVYVHLTNEVQKLQVHGEMKTELNKRVGK 224
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QK++LLR+QM+ I+EELG+ D D+ L +++ A MP + K KEL+RL+K+
Sbjct: 225 NQKDYLLREQMKQIQEELGEEDPRNADVADLRKRIDEAEMPEEVRKIALKELKRLEKINQ 284
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
P Y SR YL+ +A +PW ++E+ LD+ A+ LD DHY L +VK+RI+E+LAVR
Sbjct: 285 ASPEYNVSRTYLDYLAGMPWSISTED-SLDISKAEAVLDEDHYNLKKVKERILEFLAVRS 343
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
LK +GPVLCFVGPPGVGKTSL SIA +LGRKF+R+SLGGV+DEA+IRGHRRTYIG++
Sbjct: 344 LKDTMKGPVLCFVGPPGVGKTSLGRSIARSLGRKFVRVSLGGVRDEAEIRGHRRTYIGAL 403
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I + R G NPV++LDEIDK D RGDP+SALLEVLDPEQN +F DHYL+VPFD
Sbjct: 404 PGRIIKEIYRCGSNNPVLMLDEIDKLSHDFRGDPSSALLEVLDPEQNFSFQDHYLDVPFD 463
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSE-- 511
LSKV+F+ TAN+ PIP PL DRME+I L GY+ EEK IA R +IPR ++++GL
Sbjct: 464 LSKVMFITTANQMDPIPGPLKDRMEIIRLAGYSSEEKQHIANRFIIPREIEENGLAKTPP 523
Query: 512 -FLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
F + E ++KL I+ YTREAGVRNL+R +A + R A +V + G
Sbjct: 524 GFTR--EGLIKL-IREYTREAGVRNLQRTIAQVLRKLAKEVTQ----------------G 564
Query: 571 SPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAA 630
PL + +P VV E +LGP +F D AA
Sbjct: 565 KPLREQ----------------------------ITPEVVAE-----LLGPRKFHDEVAA 591
Query: 631 E--RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRA 688
E RV G+ GL WT GG++ F+EAT+M GK EL LTG LGDV+KESA+ AL++V+A
Sbjct: 592 ESDRV---GVVTGLAWTETGGDILFIEATSMPGKPELILTGSLGDVMKESARAALSYVQA 648
Query: 689 RATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAM 748
A + + DG + + R IHIH P+GA+PKDGPSAGVT+VTALVSL + K R AM
Sbjct: 649 HAAEFGI--PDG--VFENRTIHIHVPSGAIPKDGPSAGVTMVTALVSLLTGKPARRTVAM 704
Query: 749 TGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
TGE+TL G VL +GG+K+K+LAAHR G+K V+ P RN DL ++P V LE
Sbjct: 705 TGEITLTGRVLAIGGLKEKVLAAHRAGVKTVLAPSRNRDDLEDIPENVRQELEF 758
>gi|157273516|gb|ABV27415.1| ATP-dependent protease La [Candidatus Chloracidobacterium
thermophilum]
Length = 819
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/663 (46%), Positives = 426/663 (64%), Gaps = 51/663 (7%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+ AD + +IS EE+ +L++V L RL + ++ D L+ ++V I +V+ Q+ +
Sbjct: 167 RFADSVASHLKISVEEKQKLLETVFLADRLMRLVDIFDIELEKLQVDRIIQGRVKKQMER 226
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
S +E+ L ++++AI +ELG D+ + L+R++++A +P++ + ELRRL++M
Sbjct: 227 SHREYYLSEKIKAIHKELG-RKDERSEFEELKRRVEAANLPADAHEKAMSELRRLEQMPL 285
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
SR Y+E + +PW + SEE + DL+AA++ LD+DHYGL +VK+RI+E+LAVR+
Sbjct: 286 MSAEAVVSRNYVEWLLSVPWHERSEE-NRDLQAAQQILDADHYGLEKVKERILEFLAVRQ 344
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L G +LCFVGPPGVGKTSL SIA A GRKF+R+SLGGV+D+A+IRGHRRTYIG+
Sbjct: 345 LVSRPPGSILCFVGPPGVGKTSLGKSIAKATGRKFVRLSLGGVRDDAEIRGHRRTYIGAF 404
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG++I +K+ G NP++LLDE+DK SD RGDPA+ALLEVLDPEQN F DHYL+V +D
Sbjct: 405 PGQIIQMMKKAGTVNPLILLDEVDKLTSDYRGDPAAALLEVLDPEQNNAFRDHYLDVEYD 464
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS+V+F+ATAN IPP L DR+EVI L GYT EKL IA RHLIP+ ++HGL L
Sbjct: 465 LSQVMFIATANVLHTIPPALRDRLEVIRLSGYTEREKLEIARRHLIPKQREKHGLLETQL 524
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
E + +IQ YTREAG+RN+ER++AA+ R A KV L +P
Sbjct: 525 TFAEDALVSIIQHYTREAGMRNMERDIAAICRKVARKV-----------------LLTPE 567
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
D R + A L + LGPPR+ ER
Sbjct: 568 QD---------------------------RAAYQATITAADLPEYLGPPRYQPARLKERC 600
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
GI+ GL WT GGEV FVE + G+G++ LTG+LGDV++ESA+ A+T+VRARA +L
Sbjct: 601 EV-GIATGLAWTEAGGEVLFVETALLPGRGQIILTGKLGDVMQESARAAMTYVRARADEL 659
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ + + +D+HIH P GA+PKDGPSAG+T+ TALVS + VR D AMTGE+T
Sbjct: 660 GIAP----DFYRRQDVHIHVPEGAIPKDGPSAGITIATALVSALTGIAVRQDVAMTGEIT 715
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K+LAA R GI V++P N KDL E+P V +L+I ++ME VL
Sbjct: 716 LRGKVLPIGGLKEKLLAALRLGIHTVLVPRDNEKDLAEIPEDVREALDIHFVEQMEQVLA 775
Query: 814 QAF 816
A
Sbjct: 776 LAL 778
>gi|432356783|ref|ZP_19600030.1| lon protease [Escherichia coli KTE4]
gi|430879593|gb|ELC02924.1| lon protease [Escherichia coli KTE4]
Length = 784
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H LG RFD A RV G GL WT GG++
Sbjct: 576 H--------------------YYLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|418848966|ref|ZP_13403701.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392822313|gb|EJA78125.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
Length = 784
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNGRLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ V ++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEINV----DNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|421862179|ref|ZP_16293994.1| Lon protease [Paenibacillus popilliae ATCC 14706]
gi|410828310|dbj|GAC44431.1| Lon protease [Paenibacillus popilliae ATCC 14706]
Length = 754
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 319/751 (42%), Positives = 450/751 (59%), Gaps = 68/751 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP--DFIALSRQFKATA 126
T V++EG+ R + E YY E+ I + + DP + AL R
Sbjct: 63 TIRVLVEGVERAEIAEYVPNDEYY-------EVNAIPLHDEDHDPSSETEALMRMVLTQF 115
Query: 127 MELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
+ + + K+ T + + +LAD+ + + +++ +L++V RL+K
Sbjct: 116 EDYVHM--SKKVTPETLSAVTDIAEPGRLADVIASHLPLKMKDKQELLETVSAAERLNKL 173
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
+++ + + + +KI Q+V+ Q+ K+QKE+ LR+QM+AI++ELGD + ++ L
Sbjct: 174 LHMLNNESEVLELEKKINQRVKKQMEKTQKEYYLREQMKAIQKELGDKEGRAGEIEELRS 233
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
++ P + +QKE+ RL+KM + R Y++ + +PW K +E+ DLDL
Sbjct: 234 QLAELEAPDKVKDKIQKEIDRLEKMPSTSAEGSVIRNYIDWLFLIPWSKRTED-DLDLHK 292
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A+ LD DHYGL + K+R++EYLAV+K+ +GP+LC VGPPGVGKTSLA SIA +LGR
Sbjct: 293 AESILDEDHYGLDKPKERVLEYLAVQKMVKRMKGPILCLVGPPGVGKTSLARSIAKSLGR 352
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
+FIRISLGGV+DEA+IRGHRRTY+G+MPGR++ +K G NPV+LLDEIDK SD RGD
Sbjct: 353 QFIRISLGGVRDEAEIRGHRRTYVGAMPGRIVQAMKNAGTMNPVLLLDEIDKMASDFRGD 412
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
PASALLEVLDPEQN F+DH++ +P DLS V+FV TAN IP PLLDRME+I L GYT
Sbjct: 413 PASALLEVLDPEQNNAFSDHFVELPVDLSHVMFVTTANAVHNIPRPLLDRMEMISLSGYT 472
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EKL IA RHL+P+ +HGL L + E V+ VI+ YTREAGVR LE+ LAAL R
Sbjct: 473 ELEKLEIASRHLLPKQKREHGLEDGQLHVEEGGVRQVIREYTREAGVRQLEQQLAALCRK 532
Query: 547 AAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADG-AEVEMEVIPMGESTHEVSNTFRIT 605
AA + ++DG EV ++ HE+++
Sbjct: 533 AARMI--------------------------VSDGITEVTIQ-------AHELTD----- 554
Query: 606 SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGEL 665
LG P++ AE+ G GL WT GG+ VE + + G G+L
Sbjct: 555 ------------YLGVPKY-RYGLAEQYNQVGTVTGLAWTEVGGDTLHVEVSVVPGTGKL 601
Query: 666 HLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSA 725
LTG+LGDV+KESAQ A +++R+RA + L + + + DIHIH P GA+PKDGPSA
Sbjct: 602 LLTGKLGDVMKESAQAAFSYIRSRAAEFHLES----DFHEKADIHIHVPEGAIPKDGPSA 657
Query: 726 GVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERN 785
G+T+ TALVS + + V D AMTGE+TLRG VLP+GG+K+K LAA R GIK VI P N
Sbjct: 658 GITMATALVSALTNRYVSKDVAMTGEITLRGRVLPIGGLKEKSLAALRAGIKTVIYPAEN 717
Query: 786 LKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+DL ++P +V + I A M++VL+ A
Sbjct: 718 KRDLNDIPESVRQEMTFIPAAHMDEVLQHAL 748
>gi|348590453|ref|YP_004874915.1| ATP-dependent protease La type I [Taylorella asinigenitalis MCE3]
gi|347974357|gb|AEP36892.1| ATP-dependent protease La Type I [Taylorella asinigenitalis MCE3]
Length = 812
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 328/769 (42%), Positives = 467/769 (60%), Gaps = 62/769 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
GV A L L ++ P G T V++EG+ R + + G ++ A S +E T + +Q
Sbjct: 73 GVVANILQL---IKLPDG--TIKVLVEGVERVLIDSIEDDGNHFMATGSIVETTISDEDQ 127
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFE 168
V L R T E + + ++ + +L P+ + AD A I+
Sbjct: 128 VS------PLVRTV-GTKFEEFAKINKRLQPDVVQSILRIEDPV-RFADTICAQLHINQS 179
Query: 169 EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIK 228
++ +L+ DL RL+ ++ + I + +KI +V+ Q+ KSQ+++ L +Q++AI+
Sbjct: 180 KKQSLLEKEDLVDRLNSLLFYLEYEMDIISLEKKIQDRVKKQMEKSQRDYYLNEQIKAIQ 239
Query: 229 EELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELI 288
+ELG+ +D D L ALE+K++ AGMP + V EL++LK+M P R Y++ +
Sbjct: 240 KELGEGEDGAD-LEALEKKIKDAGMPPETEEKVLSELKKLKQMAPMSAEAAVIRSYIDAV 298
Query: 289 ADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGP 348
+PW+K S+ ++ L A+E LD+D+YGL +VK+RI+EYLAV+K + P+LC VGP
Sbjct: 299 VAVPWKKKSK-VNTKLSFAQETLDADYYGLEKVKERIVEYLAVQKRGNKLKAPILCLVGP 357
Query: 349 PGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCN 408
PGVGKTSL SIA A RK++R++LGG+ DE++IRGHRRTYIG+MPG++I + +VGV N
Sbjct: 358 PGVGKTSLGQSIARATNRKYVRMALGGMHDESEIRGHRRTYIGAMPGKIIQNMTKVGVKN 417
Query: 409 PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQP 468
P+ LLDEIDK G D RGDPA+ALLEVLDPEQN TF DHYL V +DLS V+FVAT+N
Sbjct: 418 PLFLLDEIDKIGQDYRGDPAAALLEVLDPEQNNTFQDHYLEVDYDLSDVLFVATSNTMN- 476
Query: 469 IPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYT 528
IP PLLDRMEVI L GYT +EKL IA HLIP+++ +G+ L+I ++ + +++ YT
Sbjct: 477 IPAPLLDRMEVIRLSGYTEDEKLHIAKDHLIPKLMKNNGIKKGELRIDDSAIIDIVRYYT 536
Query: 529 REAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEV 588
REAGVR+LER L ++R V ++E+E +SK V
Sbjct: 537 REAGVRSLERELGKISRKVVKAVVQKEEE----TSKKVA--------------------- 571
Query: 589 IPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFG 648
T+ VVD L+K LG +F AE+ G GL WT G
Sbjct: 572 ----------------TTLTVVDSENLDKYLGVRKF-TFGLAEKENRIGQVTGLAWTEVG 614
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
G++ +E ++GKG++ TG LGDV+KES +A T +R+ A L NL + +D
Sbjct: 615 GDLLSIEVAVVQGKGQIQHTGSLGDVMKESMSVARTVIRSWAYQLGFFD----NLFEKKD 670
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
+HIH P GA PKDGPSAG+ + TALVS +S VRAD AMTGE+TLRG VL +GG+K+K+
Sbjct: 671 MHIHVPDGATPKDGPSAGIAVTTALVSAYSGIPVRADVAMTGEITLRGEVLAIGGLKEKL 730
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LAA R GIK+V++P+ N+KDL E+P V LEII K + +VLE A E
Sbjct: 731 LAALRGGIKKVLIPQENVKDLAEIPDNVKNGLEIIPVKWINEVLEHALE 779
>gi|218557349|ref|YP_002390262.1| DNA-binding ATP-dependent protease La [Escherichia coli S88]
gi|419945556|ref|ZP_14461995.1| DNA-binding ATP-dependent protease La [Escherichia coli HM605]
gi|422748494|ref|ZP_16802407.1| ATP-dependent protease [Escherichia coli H252]
gi|432361190|ref|ZP_19604387.1| lon protease [Escherichia coli KTE5]
gi|432596324|ref|ZP_19832613.1| lon protease [Escherichia coli KTE62]
gi|433011173|ref|ZP_20199578.1| lon protease [Escherichia coli KTE229]
gi|433162253|ref|ZP_20347018.1| lon protease [Escherichia coli KTE179]
gi|218364118|emb|CAR01783.1| DNA-binding ATP-dependent protease La [Escherichia coli S88]
gi|323952949|gb|EGB48817.1| ATP-dependent protease [Escherichia coli H252]
gi|388415404|gb|EIL75334.1| DNA-binding ATP-dependent protease La [Escherichia coli HM605]
gi|430891425|gb|ELC13961.1| lon protease [Escherichia coli KTE5]
gi|431133991|gb|ELE35957.1| lon protease [Escherichia coli KTE62]
gi|431519385|gb|ELH96837.1| lon protease [Escherichia coli KTE229]
gi|431692291|gb|ELJ57729.1| lon protease [Escherichia coli KTE179]
Length = 784
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EG+ R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGVQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|442806073|ref|YP_007374222.1| ATP-dependent protease LonA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741923|gb|AGC69612.1| ATP-dependent protease LonA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 809
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/755 (41%), Positives = 450/755 (59%), Gaps = 74/755 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T V++EGL R + E ++ YY ++ +P + + +A +
Sbjct: 85 TIRVLVEGLERAKIVEYTSNEPYYEVKVRE-----------HPNPKHLVKDSETEALIRQ 133
Query: 129 LISVLEQKQKTGGR-----TKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
++S E+ K R T L +L+D+ A+ I E++ +L+ K R+
Sbjct: 134 VVSYFEKYAKLSNRVSPDITFTLTTIDDYARLSDVIAANLVIKLEDRQSILNEFSPKKRM 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
K +++ ++ + V + I +KV Q+ KSQ+E+ LR+Q++AI+ ELG+ + +D+
Sbjct: 194 EKLLKILVNEIEILEVEKNINKKVRQQIDKSQREYYLREQLKAIQNELGEGNQQQDEEAE 253
Query: 244 LER-KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
R K++ G+P +I V KE+ RL KM P R YL+ I +LPW +EE +L
Sbjct: 254 EYREKIKQLGLPQDIESKVLKEVDRLSKMHPSSAESAVVRTYLDWIVELPWNTKTEE-NL 312
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
+L A+ LD DHYGL +VK+RIIEYLA+RKL+ +GP++C GPPGVGKTS+ SIA
Sbjct: 313 NLSDAERILDEDHYGLTKVKERIIEYLAIRKLRNSLQGPIICLAGPPGVGKTSIVRSIAK 372
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
AL RK++R+SLGGV+DEA+IRGHRRTY+G+MPGR+I +++ G NP++LLDEIDK D
Sbjct: 373 ALNRKYVRVSLGGVRDEAEIRGHRRTYVGAMPGRIIKAIRQAGSKNPLILLDEIDKMSGD 432
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
RGDPA+ALLEVLD EQNK F DHY+++PFDLS V+F+ TAN IP PLLDRMEVI++
Sbjct: 433 FRGDPAAALLEVLDAEQNKEFLDHYIDLPFDLSDVMFITTANYKDAIPRPLLDRMEVIDI 492
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GY EEK+ IA RHLIP+ +++HGL ++ E+ ++ +I YTREAGVRNLER +A
Sbjct: 493 SGYVEEEKVEIAKRHLIPKQIEKHGLKPSEIKFDESAIRDIINYYTREAGVRNLERQIAT 552
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNT 601
+ R A + +++ +SK++ + LG L L D A + EV
Sbjct: 553 VCRKVARLIVSGQKKSVRVTSKNLDKFLGRRLY---LFDKANDKDEV------------- 596
Query: 602 FRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRG 661
GI+ GL WT GG+ +E M G
Sbjct: 597 -----------------------------------GIARGLAWTPVGGDTLSIEVNLMPG 621
Query: 662 KGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKD 721
G L LTGQLGDV+KESA+IA ++VR+ A + + + + D+HIH P GAVPKD
Sbjct: 622 DGALELTGQLGDVMKESARIARSYVRSIAEMIGI----EKDFHKKYDMHIHVPEGAVPKD 677
Query: 722 GPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVIL 781
GPSAG+TL TA++S + V+ + AMTGE+TLRG VL +GG+K+K+LAAHR GI V+
Sbjct: 678 GPSAGITLATAMISALTNIPVKRNVAMTGEITLRGKVLAIGGLKEKVLAAHRAGIDTVLF 737
Query: 782 PERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
P+ N KD+ E+P V+ L +I M++V++ A
Sbjct: 738 PKDNEKDVEEIPENVVKKLNLIPVSSMDEVMKNAL 772
>gi|339998422|ref|YP_004729305.1| Lon protease [Salmonella bongori NCTC 12419]
gi|339511783|emb|CCC29492.1| Lon protease [Salmonella bongori NCTC 12419]
Length = 784
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L + G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSLK-------HIQINGDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|89890783|ref|ZP_01202292.1| class III heat shock DNA-binding ATP dependent Lon protease
[Flavobacteria bacterium BBFL7]
gi|89516928|gb|EAS19586.1| class III heat shock DNA-binding ATP dependent Lon protease
[Flavobacteria bacterium BBFL7]
Length = 818
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/772 (40%), Positives = 454/772 (58%), Gaps = 68/772 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H GV AR L R ++ P G T V+++G RF + E+ T Y TA+ + + E
Sbjct: 102 HKTGVVARIL---RILKMPDGNTT--VIIQGKKRFQMGEILTEQPYITAKTTDIP----E 152
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FE 164
+ + +F A+ K ++E+I +Q ++ + + FV+S
Sbjct: 153 ARPLPDNTEFNAIIDSIKELSLEII---KQSPNIPSEASFAIKNIESNSFLVNFVSSNMN 209
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+ E+ +L+ DLK R + ++ Q + + I KV ++K Q+E+ L QQM
Sbjct: 210 LKVSEKQQLLEMNDLKDRALETLRYMNIEQQKLELKNDIQSKVHSDINKQQREYFLHQQM 269
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+ I++ELG +L + ++ +S + +H +KEL ++++M PQ Y+ R Y
Sbjct: 270 KTIQDELGGGVSSHQELDEMRKRAKSKKWDDKVKEHFEKELAKMQRMNPQVAEYSIQRNY 329
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
L+L DLPW S++ + DLK AK+ LD DHYGL VK+RIIEYLAV KL+ D + P+LC
Sbjct: 330 LDLFLDLPWNVFSKD-NFDLKRAKKILDRDHYGLDEVKKRIIEYLAVLKLRNDMKSPILC 388
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
GPPGVGKTSL S+A ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR+I +K+
Sbjct: 389 LYGPPGVGKTSLGKSMAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSIKKA 448
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
NPV +LDEIDK S GDP+SA+LEVLDPEQN F D++L + FDLSKV+FVAT N
Sbjct: 449 KTSNPVFVLDEIDKLSSSHNGDPSSAMLEVLDPEQNNAFYDNFLEMGFDLSKVMFVATCN 508
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
I P L DRME+I + GYT EEK+ I +HL+P+ L +HGL E L+I + ++ ++
Sbjct: 509 SLNTIQPALRDRMEIINVTGYTIEEKVEIGKQHLLPKQLKEHGLTKEHLKIAKPQIEKIV 568
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEV 584
+ YTRE+GVR+L++ +A + R AA +A +E
Sbjct: 569 EGYTRESGVRSLDKQMAKMVRYAAKSIAMEE----------------------------- 599
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
++T+ VV+ VLG PR +R+ E G+ GL W
Sbjct: 600 --------------PYDLKVTNETVVE------VLGAPRM-ERDKYENNDVAGVVTGLAW 638
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GG++ F+E+ +GKG L +TG LG V+KESA IA+ +++A A +L + E +
Sbjct: 639 TRVGGDILFIESILSKGKGSLTITGNLGKVMKESATIAMEYIKANAEELGIPTE----VF 694
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
++HIH P GA PKDGPSAG+T++T+LVSLF++++V+ AMTGE+TLRG VLPVGG+
Sbjct: 695 SKYNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQRKVKKSIAMTGEITLRGKVLPVGGI 754
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K+KILAA R IK ++L E+N +D+ E+ L L M DVLE A
Sbjct: 755 KEKILAAKRARIKEILLCEQNRRDIEEIKPEYLKGLTFHYVSDMSDVLELAL 806
>gi|374978476|ref|ZP_09719818.1| ATP-dependent protease La Type I [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|321226028|gb|EFX51079.1| ATP-dependent protease La Type I [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
Length = 784
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 464/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EG+ R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGVQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD ++ RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|410641922|ref|ZP_11352441.1| ATP-dependent Lon protease [Glaciecola chathamensis S18K6]
gi|410138824|dbj|GAC10628.1| ATP-dependent Lon protease [Glaciecola chathamensis S18K6]
Length = 788
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 326/764 (42%), Positives = 459/764 (60%), Gaps = 85/764 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQD----------P 113
P G V V++EG R + + + ++ A IS+ E +E+E+ EQ+
Sbjct: 84 PDGTVK--VLVEGNQRAQIADFVSTEDFFVANISNKE--DLEVEENEQEVIIRSAISQFE 139
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
++ L+++ + +S +EQ + LAD A + E+ +
Sbjct: 140 GYVKLNKKIPPEVLTSLSGIEQAAR----------------LADTMAAHMPLKLAEKQKV 183
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L+ + RL L++ + ++V +KI +V+ Q+ KSQ+E+ L +QM+AI++ELG+
Sbjct: 184 LEMDQVNDRLEYLMALMESEIDLLQVEKKIRTRVKKQMEKSQREYYLNEQMKAIQKELGE 243
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
D+ D+ AL +K+ A MP K EL +LK M P T R Y++ + ++PW
Sbjct: 244 LDEAPDEFEALSKKIDDAKMPEEAKKKATTELSKLKMMSPMSAEATVVRSYIDWLTNVPW 303
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
K S + DL AA + LD++HYGL +VK+RIIEYLAV++ +GP+LC VGPPGVGK
Sbjct: 304 TKRSA-VKKDLAAADKLLDTEHYGLEKVKERIIEYLAVQQRVRKLKGPILCLVGPPGVGK 362
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LL
Sbjct: 363 TSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLL 422
Query: 414 DEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPL 473
DEIDK SD+RGDP+SALLEVLDPEQN TF+DHYL V +DLS V+FVAT+N + IP PL
Sbjct: 423 DEIDKMSSDMRGDPSSALLEVLDPEQNSTFSDHYLEVDYDLSDVMFVATSN-SMDIPGPL 481
Query: 474 LDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGV 533
LDRMEVI L GYT +EKL IA RHL+ + + ++GL S+ L I E+ + +I+ YTREAGV
Sbjct: 482 LDRMEVIRLSGYTEDEKLNIATRHLLEKQISRNGLKSKELVIEESAIIGMIRHYTREAGV 541
Query: 534 RNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGE 593
R+LER ++ + R A + LL+
Sbjct: 542 RSLEREISKVCRKAVKNI---------------------LLN------------------ 562
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
+ T + V E L + LG RF D AE G GL WT GGE+
Sbjct: 563 ---------KDTKTVTVTEKNLSEYLGVQRF-DYGKAEDNNQIGQVTGLAWTQVGGELLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+EAT++ GKG++ TG LGDV++ES Q A+T VR+R+ L++ + + + RDIH+H
Sbjct: 613 IEATSVVGKGKMTSTGSLGDVMQESIQTAMTVVRSRSEKLRINS----DFHEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TAL+S + VR D AMTGE+TLRG VL +GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIGMCTALISALTGNPVRCDVAMTGEITLRGEVLAIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GIK VI+P+ N +DL E+P V L I + ++DVLE A +
Sbjct: 729 GGIKTVIIPKENERDLQEIPDNVKQDLSIHPVRWIDDVLELALQ 772
>gi|386824463|ref|ZP_10111598.1| DNA-binding ATP-dependent protease La [Serratia plymuthica PRI-2C]
gi|386378674|gb|EIJ19476.1| DNA-binding ATP-dependent protease La [Serratia plymuthica PRI-2C]
Length = 784
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 328/765 (42%), Positives = 460/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPAIDEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLSDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLVKAQEVLDIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ L+++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQLERNALKKGELTVDDSAITGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A +AL L+D ++
Sbjct: 544 LEREISKLCRKAV---------KAL------------LMDKKIKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG R D A RV G GL WT GG++
Sbjct: 568 ------------IEINGDNLKDYLGVQRVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A LEI +R+++VL A +
Sbjct: 729 GGIKTVLIPYENKRDLEEIPDNVIADLEIHPVQRIDEVLNLALQN 773
>gi|421492901|ref|ZP_15940260.1| hypothetical protein MU9_1430 [Morganella morganii subsp. morganii
KT]
gi|455740391|ref|YP_007506657.1| ATP-dependent protease [Morganella morganii subsp. morganii KT]
gi|400193006|gb|EJO26143.1| hypothetical protein MU9_1430 [Morganella morganii subsp. morganii
KT]
gi|455421954|gb|AGG32284.1| ATP-dependent protease [Morganella morganii subsp. morganii KT]
Length = 785
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 328/763 (42%), Positives = 460/763 (60%), Gaps = 85/763 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R ++ LS G +++A+ +E + E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRAHIKTLSDNGDFFSAQAELMESPVVDEREQEVLLRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + KLAD + + +++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLHSIDD----------------VAKLADTIASHMTLKLQDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDMVERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK++ A MP + + EL++LK M P T R Y++ + +PW K
Sbjct: 246 DAPDEAEALKRKIEEAQMPKEAKEKAEAELQKLKMMSPMSAEATVVRSYIDWMIQVPWVK 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LDSDHYGL RVK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLLKAQEILDSDHYGLERVKERILEYLAVQSRISKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L I ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKTELHIDDSAILGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ L+D L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LMDKTLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ +++ L+ LG + D A RV G GL WT GG++
Sbjct: 568 ------------IEINQDNLKDYLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E A+ GKG+L TG LG+V++ES Q ALT VRARA L + + + RDIH+H
Sbjct: 613 IETAAVPGKGKLSYTGSLGEVMQESIQAALTVVRARADKLGI----NNDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGTAMCTALVSALTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GIK V++P+ N +DL E+P V A L+I K +++VL A
Sbjct: 729 GGIKTVLIPDENRRDLEEIPDNVKADLDIHPVKTIDEVLSLAL 771
>gi|319789214|ref|YP_004150847.1| ATP-dependent protease La [Thermovibrio ammonificans HB-1]
gi|317113716|gb|ADU96206.1| ATP-dependent protease La [Thermovibrio ammonificans HB-1]
Length = 811
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 323/773 (41%), Positives = 470/773 (60%), Gaps = 100/773 (12%)
Query: 66 GRVTYIVVLEGLCRFSVQELSTRGTYYTA----------RISSLE---MTKIEMEQVEQD 112
GRV +V +GL R ++EL G Y A R S+E + K+ +Q+E+
Sbjct: 95 GRVKILV--QGLGRAKIKELKREGELYKAVLEHIPEGEYRPKSIEEEALVKLVKDQLER- 151
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+AL +Q +++++L + G +LAD+ ++S EE +
Sbjct: 152 --VVALGKQIPP---DMVAILRSVEDPG-------------RLADLIAGQLDLSTEEAVE 193
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L +VD RL K +E ++ ++ + V E I K + K Q+E+ LRQQ++AI++ELG
Sbjct: 194 ILSTVDPIERLKKVSEKLEHEIKVLEVQELIRAKARESMEKEQREYFLRQQLKAIRKELG 253
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
+ ++ ++ K++ A MP + + V KEL RL+KM P+ R +LE + +LP
Sbjct: 254 EEEERSKEIEEYREKIKRAKMPKEVEEAVLKELARLEKMHPESAEAAVLRTWLEWMIELP 313
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKP-------DARGPVLCF 345
W K + + LD++ A+ LD DHY L +VK RI+EYLAV+ L + + P +CF
Sbjct: 314 WSKRTRD-RLDIERARRILDEDHYDLEKVKDRILEYLAVKALIKKRKKRIKEVKQPTICF 372
Query: 346 VGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVG 405
VGPPGVGKTSLA SIA ALGRKF+RISLGGV+DEA+IRGHRRTY+G+MPG++I +K+ G
Sbjct: 373 VGPPGVGKTSLARSIAKALGRKFVRISLGGVRDEAEIRGHRRTYVGAMPGKIIQAIKKAG 432
Query: 406 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 465
NPV+LLDEIDK SD RGDPA+ALLEVLDPEQN+ F D+Y+N PFDLS+V+F+ATAN
Sbjct: 433 TKNPVILLDEIDKMASDFRGDPAAALLEVLDPEQNREFVDNYINHPFDLSEVLFIATANT 492
Query: 466 AQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQ 525
IP PL DR+EV+ +PGYT EKL+IA ++++P+ L HGL E ++ ++ + +I+
Sbjct: 493 PHTIPEPLYDRLEVLNIPGYTEYEKLQIAKKYIVPKQLKNHGLTPEDVEFTDSGLLHIIR 552
Query: 526 RYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVE 585
YTREAGVRNL+R +AA+ R A+ + E ++++
Sbjct: 553 HYTREAGVRNLDRKIAAICRKVALWITEGKEKK--------------------------- 585
Query: 586 MEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRF-DDREAAERVAAPGISVGLVW 644
+R+T LV EK+LG P+F + E E G++ GL W
Sbjct: 586 ----------------YRVTKKLV------EKILGAPKFVPELELGEDEV--GVATGLAW 621
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GG+V F+EA G G L LTG+LG+V+KESAQ AL +++A A + +
Sbjct: 622 TPVGGDVLFIEAIVTGGSGRLILTGRLGEVMKESAQAALGFIKANAEKYNIDKD-----F 676
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
DIH+H PAGA+PKDGPSAG+T+ TA++S + ++VR D AMTGE+TL G VLPVGG+
Sbjct: 677 SKIDIHVHVPAGAIPKDGPSAGITIATAMLSALTGRKVRKDVAMTGEITLGGKVLPVGGL 736
Query: 765 KDKILAAHRYGIKRVILPERNLKDLV-EVPAAVLASLEIILAKRMEDVLEQAF 816
K+K+LAA RYG+K VILPE+N ++++ E+P ++++ R+E V E A
Sbjct: 737 KEKVLAALRYGVKTVILPEKNKQEVLEELPEEAKRKIKLVFVDRVEPVFELAL 789
>gi|357420766|ref|YP_004928212.1| ATP-dependent protease [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
gi|354803273|gb|AER40387.1| ATP-dependent protease [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
Length = 800
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 314/765 (41%), Positives = 456/765 (59%), Gaps = 70/765 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V+L+G RF V + Y+ A I +LE K
Sbjct: 100 GTVAKILKL---LKMPDGNTT--VILQGKRRFKVNRFIQKNPYFKAEILALEEKKPSC-- 152
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVA-SFEISF 167
+D +++AL K A I +++ + + + FVA + ++
Sbjct: 153 --KDKEYLALVESIKEIA---IKIIQDNPNIPSEASIAIRNIESPSFLINFVAANMNLAT 207
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
++ +L+ DLK R + ++ Q I++ I +V + + Q+E+ L QQ++AI
Sbjct: 208 RDKQKLLEYDDLKKRAMETLRFLNVEHQQIKLKNDIQSRVRSDMDQQQREYFLHQQIKAI 267
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
+EELGD E ++ + K P K +EL ++++ PQ P YT R YLEL
Sbjct: 268 QEELGD-ISYEKEIDEMRAKASRKKWPKEAKKQFDRELLKMQRTNPQMPEYTVQRNYLEL 326
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
+ DLPWE+ S++ + DL+ A++ LD DHYGL +VK+RIIEYLAV KL+ D R P+LCF G
Sbjct: 327 MIDLPWERYSKD-NFDLEFAQKILDRDHYGLEKVKERIIEYLAVLKLRGDMRSPILCFYG 385
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL SIA+AL RK++R+SLGG+ DE++IRGHRRTYIG+MPGRL+ +++VG
Sbjct: 386 PPGVGKTSLGRSIATALKRKYVRVSLGGLHDESEIRGHRRTYIGAMPGRLLQSIRKVGTS 445
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV ++DEIDK G GDP+SA+LEVLDPEQN +F D++L + +DLSKV+F+ATAN
Sbjct: 446 NPVFVIDEIDKIGLGTNGDPSSAMLEVLDPEQNTSFYDNFLEMGYDLSKVLFIATANSLS 505
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
I P L+DRMEVIE+ GYT EEK I +H++P+ L ++GL L + ++ VI+ Y
Sbjct: 506 NIQPALIDRMEVIEMNGYTVEEKTPIVKKHILPKQLKENGLKKSDLILGTKQIEKVIESY 565
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TRE+G+R LE+N+A LAR AA +A + K V RL +E
Sbjct: 566 TRESGLRTLEKNIAKLARYAAKNIAM--------NRKYVKRLS---------------IE 602
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
I E++LG P DR V PG+ GL WTNF
Sbjct: 603 KI--------------------------EEILGIPNDPDRYEVNNV--PGVVTGLAWTNF 634
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGR 707
GG++ ++E++ +GKG L +TG LG V+KESA IAL +++A +L + + + + +
Sbjct: 635 GGDILYIESSLSKGKGNLSITGNLGTVMKESATIALQYIKAHYEELNIDPK----MFEEQ 690
Query: 708 DIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDK 767
++H+H P GAVPKDGPSAG+ ++T+LVS ++++++R AMTGE+TLRG VLPVGG+K+K
Sbjct: 691 NVHVHVPEGAVPKDGPSAGIAMLTSLVSSYTKRKLRPHLAMTGEITLRGKVLPVGGIKEK 750
Query: 768 ILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
ILAA R IK VIL + N KD+ E+ L L + M DV+
Sbjct: 751 ILAARRANIKDVILSQDNKKDVEEIKQDHLKGLTFDYVRDMNDVI 795
>gi|432512647|ref|ZP_19749890.1| lon protease [Escherichia coli KTE224]
gi|432697756|ref|ZP_19932928.1| lon protease [Escherichia coli KTE169]
gi|433143001|ref|ZP_20328180.1| lon protease [Escherichia coli KTE168]
gi|431044967|gb|ELD55222.1| lon protease [Escherichia coli KTE224]
gi|431246950|gb|ELF41193.1| lon protease [Escherichia coli KTE169]
gi|431666689|gb|ELJ33316.1| lon protease [Escherichia coli KTE168]
Length = 784
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDVAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|418774852|ref|ZP_13330813.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418804743|ref|ZP_13360347.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|392750052|gb|EJA07028.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392769772|gb|EJA26501.1| DNA-binding ATP-dependent protease La [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
Length = 784
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 463/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLDSPAIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQF 653
H LG RFD ++ RV G GL WT GG++
Sbjct: 576 H--------------------GYLGVQRFDYGRADSENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|399007985|ref|ZP_10710479.1| ATP-dependent protease La [Pseudomonas sp. GM17]
gi|398119025|gb|EJM08741.1| ATP-dependent protease La [Pseudomonas sp. GM17]
Length = 798
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/759 (43%), Positives = 462/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S ++ E++ E++ + S
Sbjct: 80 PDGTVK--VLVEGEQRGAVECFSEVDGHCRAEVSLID----EVDAPERESEVFVRS---- 129
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPI---HKLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 130 -----LLSQFEQYVQLGKKVPAEVLSSLNSIDEPSRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEVEELKKRIDAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ E ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGELEFDEEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A +E AL E
Sbjct: 543 QIAKVCRKAV-------KEHAL------------------------------------EK 559
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
+ ++TS L LE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 560 RFSVKVTSDL------LEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKT 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|378951822|ref|YP_005209310.1| hypothetical protein PSF113_3915 [Pseudomonas fluorescens F113]
gi|359761836|gb|AEV63915.1| Lon [Pseudomonas fluorescens F113]
Length = 798
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 334/759 (44%), Positives = 463/759 (61%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S +E E++ E++ + S
Sbjct: 80 PDGTVK--VLVEGEQRGTVERFSEVDGHCRAEVSLIE----EVDAPERESEVFVRS---- 129
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 130 -----LLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD D+
Sbjct: 185 LSARVEHVLALLDGEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEIEELKKRIDAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ E ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGELEFDEEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A +E A L+ R A
Sbjct: 543 QIAKVCRKAV-------KEHA--------------LEKRFA------------------- 562
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
++T+ L LE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 563 ---VKVTADL------LEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRARSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKI 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|373857605|ref|ZP_09600346.1| ATP-dependent protease La [Bacillus sp. 1NLA3E]
gi|372452737|gb|EHP26207.1| ATP-dependent protease La [Bacillus sp. 1NLA3E]
Length = 777
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/767 (40%), Positives = 463/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-----------MTKIEMEQVEQD 112
P+G T V++EGL R + + +Y A + + E + + +E EQ
Sbjct: 82 PNG--TIRVLVEGLKRAEIVLMHDDDNHYVASLKTFEDDPSKDIEDQALMRTMLEHFEQ- 138
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I +S++ A ++ +++ GR +ADI ++ + +++
Sbjct: 139 --YIKMSKKISAETYSSVADIDEP----GR------------MADIIASNLPLKLKDKQE 180
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L++VD+K R++ +++ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELG
Sbjct: 181 ILETVDVKERMNHVIDIIQNEKEVLNLEKKIGQRVKRSMERTQKEYYLREQMKAIQKELG 240
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D + ++ L K++ AGM ++ + KEL R +K+ R Y+E + LP
Sbjct: 241 DKEGKTGEIAELTEKIEDAGMTDHVKEVALKELDRYEKVPTSSAESAVIRNYIEWLISLP 300
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W KA+++ DLD+ A+ L DHYGL +VK+R++EYLAV+KL +GP+LC GPPGVG
Sbjct: 301 WTKATDD-DLDIHKAERILHKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLSGPPGVG 359
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSLA SIA+++ R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV L
Sbjct: 360 KTSLARSIATSMNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGTINPVFL 419
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK SD RGDP++A+LEVLDPEQN F+DHY+ +DLSKV+F+ATAN IP P
Sbjct: 420 LDEIDKMSSDFRGDPSAAMLEVLDPEQNNNFSDHYIEETYDLSKVMFIATANNLSTIPGP 479
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DRME+I + GYT EKL IA HL+ + + HGL LQ+ + + VI+ YTREAG
Sbjct: 480 LRDRMEIITIAGYTELEKLHIAKDHLLQKQIKDHGLTKAQLQVRDEAITKVIRYYTREAG 539
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAEVEMEVIPM 591
VR+LER LA + R A + E+++ + + K + LG P+ AE+E ++
Sbjct: 540 VRSLERQLATICRKTARVIVSGEKKRVIVTDKTIEEFLGKPIFQ---YGQAELEDQI--- 593
Query: 592 GESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEV 651
G++ GL +T GG++
Sbjct: 594 ---------------------------------------------GVATGLAYTTVGGDI 608
Query: 652 QFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHI 711
+E + GKG+L LTG+LGDV+KESAQ A ++VR++AT+L + ED + DIHI
Sbjct: 609 LQIEVSLSPGKGKLILTGKLGDVMKESAQAAFSYVRSKATELG-IDED---FHEKHDIHI 664
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GAVPKDGPSAG+T+ TALVS + K +R + MTGE+TLRG VLP+GG+K+K L+A
Sbjct: 665 HVPEGAVPKDGPSAGITIATALVSALTGKPIRREVGMTGEITLRGRVLPIGGLKEKTLSA 724
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR G+ ++ILP+ N KD+ ++P +V LE +L ++ VL+ A G
Sbjct: 725 HRAGLTKIILPKDNEKDIEDIPESVREQLEFVLVSSIDQVLKHALIG 771
>gi|117622699|ref|YP_851612.1| DNA-binding ATP-dependent protease La [Escherichia coli APEC O1]
gi|115511823|gb|ABI99897.1| DNA-binding ATP-dependent protease La [Escherichia coli APEC O1]
Length = 799
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EG+ R + LS G +++A+ LE I E EQ + Q +
Sbjct: 99 PDGTVK--VLVEGVQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 156
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 157 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 201 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 261 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 319
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 320 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 379
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 380 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 439
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 440 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 498
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 499 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 558
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 559 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 590
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 591 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 627
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 628 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 681
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 682 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 741
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 742 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 788
>gi|217979046|ref|YP_002363193.1| ATP-dependent protease La [Methylocella silvestris BL2]
gi|217504422|gb|ACK51831.1| ATP-dependent protease La [Methylocella silvestris BL2]
Length = 805
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 326/788 (41%), Positives = 466/788 (59%), Gaps = 74/788 (9%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q+ ASD + I G A L L ++ P G V V++EG R VQ +
Sbjct: 60 QMNASDDDPAPKAIFAT--GTLASVLQL---LKLPDGTVK--VLVEGQVRAKVQGYTRTD 112
Query: 90 TYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLET 149
+Y A ++ ++ +VE AL+R + E ++ +K +
Sbjct: 113 DFYEADAEVIDDEPVDKVEVE------ALAR---SVVSEFEGYVKLNKKISPEVAAAVTQ 163
Query: 150 VPIH-KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVE 208
+ + KLAD + + ++ +L++ + RL K L++ + ++V ++I +V+
Sbjct: 164 IEDYAKLADTIASHLAVKIADKQTVLETTSITKRLEKCLALMESEISVLQVEKRIRTRVK 223
Query: 209 GQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRL 268
Q+ K+Q+E+ L +QM+AI++ELGD +D +DDL L+ ++++ + EL++L
Sbjct: 224 RQMEKTQREYYLNEQMKAIQKELGD-EDGKDDLAELDERIKTTKLSKEARDKAVAELKKL 282
Query: 269 KKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEY 328
++M P T R YL+ I +PW K S+ + DL A+E LD++H+GL +VK+RI+EY
Sbjct: 283 RQMSPMSAEATVVRNYLDWILSIPWNKRSK-VKKDLTIAEEVLDAEHFGLEKVKERILEY 341
Query: 329 LAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRT 388
LAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRGHRRT
Sbjct: 342 LAVQTRANKLSGPILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRGHRRT 401
Query: 389 YIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL 448
YIGSMPG++I +++ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN+ FNDHYL
Sbjct: 402 YIGSMPGKIIQSMRKAKSSNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNQAFNDHYL 461
Query: 449 NVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGL 508
V +DLS V+FV TAN IP PL+DRME+I + GYT +EK+ IA RHLIP L +HGL
Sbjct: 462 EVDYDLSNVMFVTTANTLN-IPAPLMDRMEIIRIAGYTEDEKVEIARRHLIPAALKKHGL 520
Query: 509 GSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR 568
+ L I ++ + L+I+RYTREAGVRNLER ++ L+R A ++ E
Sbjct: 521 AEKELAIDDSALILLIRRYTREAGVRNLEREVSKLSRKAVKQILTTE------------- 567
Query: 569 LGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDRE 628
+ + +IT+ V D LG PRF E
Sbjct: 568 ------------------------------AKSVQITADNVPD------YLGVPRFRYGE 591
Query: 629 AAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRA 688
AE G+ GL WT GGE+ +E M GKG + +TG L DV+KES A ++VR+
Sbjct: 592 -AETEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESISAAASYVRS 650
Query: 689 RATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAM 748
RA D + L RDIH+H P GA PKDGPSAGV + TA+VS+ + +R D AM
Sbjct: 651 RAVDFGIEPP----LFDRRDIHVHVPEGATPKDGPSAGVAMATAIVSIITGIPIRRDIAM 706
Query: 749 TGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRM 808
TGE+TLRG +LP+GG+K+K+LAA R G+K+V++PE N KDLV++P +V +LEI+ RM
Sbjct: 707 TGEITLRGRILPIGGLKEKLLAALRGGLKKVLIPEENAKDLVDIPNSVKNALEIVPVARM 766
Query: 809 EDVLEQAF 816
++VL A
Sbjct: 767 DEVLAHAL 774
>gi|77360984|ref|YP_340559.1| DNA-binding ATP-dependent protease La [Pseudoalteromonas
haloplanktis TAC125]
gi|76875895|emb|CAI87116.1| DNA-binding ATP-dependent protease La; heat shock K-protein
[Pseudoalteromonas haloplanktis TAC125]
Length = 786
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 325/778 (41%), Positives = 463/778 (59%), Gaps = 88/778 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EME 107
G A L L ++ P G V V++EG R ++E ++ A +E I E E
Sbjct: 72 GTIATVLQL---LKLPDGTVK--VLVEGTQRAKIEEFIDSEEFFVANAQFIESESIDEHE 126
Query: 108 Q-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
Q + Q ++ L+++ + +S ++ + LAD
Sbjct: 127 QDVFIRSAISQFEGYVKLNKKIPPEVLTSVSGIDDPAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E+ +L++ + RL L++ + ++V +KI +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKVPEKQKVLETSSVTERLEYLMALMEGEIDLLQVEKKIRSRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELG+ DD D+ AL+++++ +GMP+ + EL +LK M P +
Sbjct: 231 NEQMKAIQKELGELDDVPDEFEALKKRIEESGMPTEAKEKATAELSKLKMMSPMSAEASV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW+K S+ + DL A++ LDSDHYGL +VK+RI+EYLAV++ +G
Sbjct: 291 VRSYIDTLISVPWKKRSK-VKKDLAGAQKILDSDHYGLEKVKERILEYLAVQQRTNKLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA + GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 350 PILCLVGPPGVGKTSLGQSIARSTGRKYIRMALGGVRDEAEIRGHRRTYIGSMPGKMIQN 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN F DHYL V +DLS V+FV
Sbjct: 410 MTKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSHFADHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI L GYT +EKL IA +HLI + + ++GL ++I ++ +
Sbjct: 470 ATSNSFN-IPGPLLDRMEVIRLSGYTEDEKLNIAKQHLITKQVKRNGLKEHEIEIADSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVRNLER ++ L R A + ++
Sbjct: 529 TGIIRYYTREAGVRNLEREISKLCRKAVKNILIEKD------------------------ 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGI 638
T+ + +DE LE LG RFD E +R+ G
Sbjct: 565 ------------------------TTTVTIDEHNLEDFLGVQRFDYGKAEDGDRI---GQ 597
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
GL WT GG++ +E A+ GKG+L TG LGDV++ES Q A+T VR RA + ++ +
Sbjct: 598 VTGLAWTEVGGDLLTIECAAVPGKGKLSYTGSLGDVMQESIQAAMTVVRNRAEEFRINS- 656
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ + RDIH+H P GA PKDGPSAG +VT LVS + VRAD AMTGE+TLRG V
Sbjct: 657 ---DFYEKRDIHVHVPEGATPKDGPSAGAAMVTGLVSSLTGNPVRADVAMTGEITLRGEV 713
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K+LAAHR GIK VI+P+ N +DL E+P VLA L+I +++VL+ A
Sbjct: 714 LPIGGLKEKLLAAHRGGIKTVIIPKINERDLKEIPDNVLAGLDIHPVTWIDEVLKLAL 771
>gi|293413694|ref|ZP_06656343.1| ATP-dependent protease La [Escherichia coli B185]
gi|291433752|gb|EFF06725.1| ATP-dependent protease La [Escherichia coli B185]
Length = 799
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 99 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 156
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 157 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 201 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 261 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 319
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 320 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 379
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 380 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 439
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 440 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 498
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 499 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 558
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 559 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 590
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 591 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 627
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 628 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 681
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 682 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 741
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L I KR+E+VL A +
Sbjct: 742 HRGGIKTVLIPFENKRDLEEIPDNVIADLVIHPVKRIEEVLTLALQN 788
>gi|304311292|ref|YP_003810890.1| Lon protease (S16) [gamma proteobacterium HdN1]
gi|301797025|emb|CBL45238.1| Lon protease (S16) [gamma proteobacterium HdN1]
Length = 808
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 325/782 (41%), Positives = 474/782 (60%), Gaps = 82/782 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G A L L ++ P G V V++EG R V+ + + + +A I + +I
Sbjct: 61 HRIGTVATILQL---LKLPDGTVK--VLVEGNSRSRVKRIKSSPGFLSADIEEIPPGQIS 115
Query: 106 MEQVE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
E Q ++ LS++ + +S +E+ + LAD
Sbjct: 116 ERDAEGLVRSLLSQFEQYVKLSKKVPPEILTSVSGIEEPSR----------------LAD 159
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
A + E+ +L+ +L+ R+ L++ + ++V ++I +V+ Q+ KSQ+E
Sbjct: 160 TISAHLALKLPEKQRILEIFELRARIEHLMTLMEGEIDLLQVEKRIRGRVKKQMEKSQRE 219
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++ELGD D+ ++ + E+K++++GM + EL +LK M P
Sbjct: 220 YYLNEQMKAIQKELGDLDNGVNETESFEKKIEASGMHKEAADKARSELNKLKMMSPMSAE 279
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
T R YL+ + +LPW+K S+ ++ DLK A+ L+SDHYGL VK+RI+EYLAV+
Sbjct: 280 ATVVRSYLDWMVNLPWKKKSK-VNHDLKHAETILNSDHYGLDEVKERILEYLAVQSRVKK 338
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
RGPVLC VGPPGVGKTSL SIA A RKF+R++LGGV+DEA+IRGHRRTYIGS+PG+L
Sbjct: 339 LRGPVLCLVGPPGVGKTSLGQSIAKATNRKFVRMALGGVRDEAEIRGHRRTYIGSLPGKL 398
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
+ + + GV NP+ LLDEIDK G D+RGDPASALLEVLDPEQN TFNDHYL V +DLS V
Sbjct: 399 VQKISKAGVKNPLFLLDEIDKMGVDMRGDPASALLEVLDPEQNSTFNDHYLEVDYDLSDV 458
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+F+ T+N + IP PLLDRMEVI +PGYT +EK+ IA ++L+P+ L+ +GLG + L++ +
Sbjct: 459 MFICTSN-SMNIPAPLLDRMEVIRIPGYTEDEKVNIARQYLLPKQLEFNGLGKKELEVSD 517
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
++ +++ YT+EAGVRNLER ++ + R V EQ +L N
Sbjct: 518 EAIRHIVRYYTKEAGVRNLEREISKICRKY---VKEQ------------------MLGNA 556
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAA 635
DG + P+ + V ++EK LG +F +E +R+
Sbjct: 557 KKDGKK------PVATT---------------VSAELIEKYLGVRKFSFGQKEDQDRI-- 593
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
G GL WT+ GGE+ +EA + GKG TGQLG+V++ES Q A T VR+RA ++ +
Sbjct: 594 -GQVTGLAWTSVGGELLTIEAAMVPGKGRQIRTGQLGEVMQESIQAAFTVVRSRARNMGI 652
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
++LL DIHIH P GA PKDGPSAG+ + TALVS+ + V++D AMTGE+TLR
Sbjct: 653 ----EVDLLDKNDIHIHVPEGATPKDGPSAGIGMCTALVSVLTNIPVKSDVAMTGEITLR 708
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
G VLP+GG+K+K+LAAHR GI VI+PE N +DL E+P + +SL+I K +++VL A
Sbjct: 709 GQVLPIGGLKEKLLAAHRGGITNVIIPEENRRDLKEIPENIKSSLKIHCVKWIDEVLALA 768
Query: 816 FE 817
+
Sbjct: 769 LQ 770
>gi|374605367|ref|ZP_09678298.1| ATP-dependent protease La [Paenibacillus dendritiformis C454]
gi|374389042|gb|EHQ60433.1| ATP-dependent protease La [Paenibacillus dendritiformis C454]
Length = 775
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 298/663 (44%), Positives = 417/663 (62%), Gaps = 55/663 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ + + +++ +L++V RL+K ++++ + + + +KI Q+V+ Q+ K
Sbjct: 165 RLADVIASHLPLKMKDKQELLETVSAAGRLNKLLQMLNNESEVLELEKKINQRVKKQMEK 224
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+ LR+QM+AI++ELGD + ++ L ++ P + +QKE+ RL+KM
Sbjct: 225 TQKEYYLREQMKAIQKELGDKEGRAGEIEELRSQLAELEAPDKVKDKIQKEIDRLEKMPS 284
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
+ R Y++ + +PW K +E+ DLDL A+ LD DHYGL + K+R++EYLAV++
Sbjct: 285 TSAEGSVIRNYIDWLFLIPWSKRTED-DLDLHKAESILDEDHYGLDKPKERVLEYLAVQQ 343
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+ +GP+LC VGPPGVGKTSLA SIA +LGR+FIRISLGGV+DEA+IRGHRRTY+G+M
Sbjct: 344 MVKRMKGPILCLVGPPGVGKTSLARSIAKSLGRQFIRISLGGVRDEAEIRGHRRTYVGAM 403
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR++ +K G NPV+LLDEIDK SD RGDPASALLEVLDPEQN F+DH++ +P D
Sbjct: 404 PGRIVQAMKNAGTMNPVLLLDEIDKMASDFRGDPASALLEVLDPEQNNAFSDHFVELPVD 463
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FV TAN IP PLLDRME+I L GYT EKL IA RHL+P+ +HG E L
Sbjct: 464 LSHVMFVTTANAVHNIPRPLLDRMELISLSGYTELEKLEIASRHLLPKQKREHGFEDEQL 523
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ E +V+ VI+ YTREAGVR LE+ LAAL R AA +
Sbjct: 524 HVEEGVVRRVIREYTREAGVRQLEQQLAALCRKAARMI---------------------- 561
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
++DG + + + L LG P++ AE+
Sbjct: 562 ----VSDG-----------------------VTEVTIQADELTDYLGVPKY-RYGLAEQH 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG+ VE + + G G+L LTG+LGDV+KESAQ A +++R+RA +
Sbjct: 594 NQVGTVTGLAWTEVGGDTLNVEVSVVPGTGKLLLTGKLGDVMKESAQAAFSYIRSRAAEF 653
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
L + + + DIHIH P GA+PKDGPSAG+T+ TALVS + + V D AMTGE+T
Sbjct: 654 HLES----DFHEKADIHIHVPEGAIPKDGPSAGITMATALVSALTNRYVSKDVAMTGEIT 709
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K LAA R GIK VI P N++DL ++P +V + I A M++VL+
Sbjct: 710 LRGRVLPIGGLKEKSLAALRAGIKTVIYPAENMRDLNDIPESVRQEMTFIPAAHMDEVLQ 769
Query: 814 QAF 816
A
Sbjct: 770 HAL 772
>gi|91793845|ref|YP_563496.1| ATP-dependent protease La [Shewanella denitrificans OS217]
gi|91715847|gb|ABE55773.1| Lon-A peptidase. Serine peptidase. MEROPS family S16 [Shewanella
denitrificans OS217]
Length = 783
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 327/777 (42%), Positives = 471/777 (60%), Gaps = 84/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTK-IEME 107
G A L L ++ P G V V++EG R V + + +++ A LE IE E
Sbjct: 72 GTVASILQL---LKLPDGTVK--VLVEGGQRAKVLKYTQEDSFFVATAQYLESEDLIEKE 126
Query: 108 Q-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
+ + Q +I L+++ + +S +++ + LAD
Sbjct: 127 EEVLVRSAISQFEGYIKLNKKIPPEVLTSLSGIDEAAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +++ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKLEDKQAVLEMINVGERLEYLMAMMEAEIDLLQVEKRIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ D+ L +K++ AGMP++ EL +LK M P T
Sbjct: 231 NEQMKAIQKELGDIDESHDEFDVLGKKIEEAGMPADAKDKANAELNKLKMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW+K S+ I DL A+ LD+DH+GL +VK RI+EYLAV+ +G
Sbjct: 291 VRSYVDWMTSVPWKKRSK-IKRDLAKAQVVLDTDHHGLEKVKDRILEYLAVQSRVRKLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGREYVRVALGGVRDEAEIRGHRRTYIGSMPGKIIQK 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FV
Sbjct: 410 MAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNGTFNDHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + ++++GL ++ + I ++ +
Sbjct: 470 ATSN-SMDIPGPLLDRMEVIRLSGYTEDEKLNIAKKHLLEKQIERNGLKAKEVHIDDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR+LER L+ + R KV +Q LLD +
Sbjct: 529 LGIIRYYTREAGVRSLERELSKICR----KVVKQ-----------------ILLDKSV-- 565
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+V+++ L+ LG RF D AE G
Sbjct: 566 -------------------------KSVVINQDNLKTFLGVQRF-DYGKAESKNQIGQVT 599
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
L WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L +
Sbjct: 600 ALAWTQVGGDLLTIEATSVAGKGKLAYTGSLGDVMQESIQAAMTVVRARAEQLGI----N 655
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + RDIH+H P GA PKDGPSAG + TALVS + VR+D AMTGE+TLRG VLP
Sbjct: 656 NDFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRSDVAMTGEITLRGEVLP 715
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK V++P+ N +DL E+PA V+A L+I + +++VL+ A E
Sbjct: 716 IGGLKEKLLAAHRGGIKHVLIPKENERDLEEIPANVIADLQIHPVRWIDEVLKLALE 772
>gi|410087014|ref|ZP_11283719.1| ATP-dependent protease [Morganella morganii SC01]
gi|409766243|gb|EKN50337.1| ATP-dependent protease [Morganella morganii SC01]
Length = 785
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 328/763 (42%), Positives = 460/763 (60%), Gaps = 85/763 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R ++ LS G +++A+ +E + E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRAHIKTLSDNGDFFSAQAELMESPVVDEREQEVLLRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + KLAD + + +++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLHSIDD----------------VAKLADTIASHMTLKLQDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVVERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK++ A MP + + EL++LK M P T R Y++ + +PW K
Sbjct: 246 DAPDEAEALKRKIEEAQMPKEAKEKAEAELQKLKMMSPMSAEATVVRSYIDWMIQVPWVK 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LDSDHYGL RVK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLLKAQEILDSDHYGLERVKERILEYLAVQSRISKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L I ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKTELHIDDSAILGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ L+D L
Sbjct: 544 LEREISKLCRKAVKQL---------------------LMDKSLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ +++ L+ LG + D A RV G GL WT GG++
Sbjct: 568 ------------IEINQDNLKDYLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E A+ GKG+L TG LG+V++ES Q ALT VRARA L + + + RDIH+H
Sbjct: 613 IETAAVPGKGKLSYTGSLGEVMQESIQAALTVVRARADKLGI----NNDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGTAMCTALVSALTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GIK V++P+ N +DL E+P V A L+I K +++VL A
Sbjct: 729 GGIKTVLIPDENRRDLEEIPDNVKADLDIHPVKTIDEVLSLAL 771
>gi|189010029|ref|ZP_02803939.2| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4076]
gi|189404810|ref|ZP_02811297.2| ATP-dependent protease La [Escherichia coli O157:H7 str. EC869]
gi|208816306|ref|ZP_03257485.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4045]
gi|208822831|ref|ZP_03263149.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4042]
gi|209399962|ref|YP_002269086.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. EC4115]
gi|217325661|ref|ZP_03441745.1| ATP-dependent protease La [Escherichia coli O157:H7 str. TW14588]
gi|387881035|ref|YP_006311337.1| DNA-binding ATP-dependent protease La [Escherichia coli Xuzhou21]
gi|416316810|ref|ZP_11659942.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. EC1212]
gi|189002906|gb|EDU71892.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4076]
gi|189373520|gb|EDU91936.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC869]
gi|208732954|gb|EDZ81642.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4045]
gi|208737024|gb|EDZ84708.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4042]
gi|209161362|gb|ACI38795.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4115]
gi|209743836|gb|ACI70225.1| endopeptidase La [Escherichia coli]
gi|209743838|gb|ACI70226.1| endopeptidase La [Escherichia coli]
gi|209743842|gb|ACI70228.1| endopeptidase La [Escherichia coli]
gi|217321882|gb|EEC30306.1| ATP-dependent protease La [Escherichia coli O157:H7 str. TW14588]
gi|320192855|gb|EFW67495.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. EC1212]
gi|386794493|gb|AFJ27527.1| DNA-binding ATP-dependent protease La [Escherichia coli Xuzhou21]
Length = 799
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 99 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 156
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 157 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 201 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 261 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 319
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E L++DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 320 ARSKVKKDLRQAQEILNTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 379
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 380 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 439
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 440 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 498
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 499 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 558
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 559 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 590
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 591 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 627
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 628 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 681
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 682 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 741
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 742 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 788
>gi|422595336|ref|ZP_16669624.1| ATP-dependent protease La [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330985641|gb|EGH83744.1| ATP-dependent protease La [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 798
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 461/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YNVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P ++ EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDVLTKATAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL +Q E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEIQFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKAV-------------------------------- 552
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
H + F + V MLE LG +F AE+ G
Sbjct: 553 -------------KEHAMEKRFSVQ----VTAEMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|399002986|ref|ZP_10705660.1| ATP-dependent protease La [Pseudomonas sp. GM18]
gi|398123672|gb|EJM13213.1| ATP-dependent protease La [Pseudomonas sp. GM18]
Length = 798
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 328/759 (43%), Positives = 455/759 (59%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S ++ T+ A R+ +
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLIDETE-------------APERESE 124
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L++ EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 125 VFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEIEELKKRIDAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQIAANGLKKGELEFDAEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A H +
Sbjct: 543 QIAKVCRKAV---------------------------------------------KEHAL 557
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
F + V MLE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 558 EKRFSVK----VTAEMLEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKT 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|15829747|ref|NP_308520.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. Sakai]
gi|168754544|ref|ZP_02779551.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4401]
gi|168760406|ref|ZP_02785413.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4501]
gi|168768394|ref|ZP_02793401.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4486]
gi|195940566|ref|ZP_03085948.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. EC4024]
gi|254791623|ref|YP_003076460.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. TW14359]
gi|261223922|ref|ZP_05938203.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. FRIK2000]
gi|261256364|ref|ZP_05948897.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. FRIK966]
gi|416312994|ref|ZP_11657929.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. 1044]
gi|416325622|ref|ZP_11666030.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. 1125]
gi|419043312|ref|ZP_13590286.1| ATP-dependent protease La [Escherichia coli DEC3A]
gi|419049041|ref|ZP_13595960.1| ATP-dependent protease La [Escherichia coli DEC3B]
gi|419060690|ref|ZP_13607475.1| ATP-dependent protease La [Escherichia coli DEC3D]
gi|419078753|ref|ZP_13624238.1| ATP-dependent protease La [Escherichia coli DEC4A]
gi|419090241|ref|ZP_13635561.1| ATP-dependent protease La [Escherichia coli DEC4C]
gi|419096343|ref|ZP_13641587.1| ATP-dependent protease La [Escherichia coli DEC4D]
gi|419102074|ref|ZP_13647241.1| ATP-dependent protease La [Escherichia coli DEC4E]
gi|420267843|ref|ZP_14770250.1| ATP-dependent protease La [Escherichia coli PA22]
gi|420273505|ref|ZP_14775838.1| ATP-dependent protease La [Escherichia coli PA40]
gi|420284956|ref|ZP_14787174.1| ATP-dependent protease La [Escherichia coli TW10246]
gi|420290575|ref|ZP_14792740.1| ATP-dependent protease La [Escherichia coli TW11039]
gi|420296236|ref|ZP_14798333.1| ATP-dependent protease La [Escherichia coli TW09109]
gi|420302155|ref|ZP_14804187.1| ATP-dependent protease La [Escherichia coli TW10119]
gi|420307997|ref|ZP_14809971.1| ATP-dependent protease La [Escherichia coli EC1738]
gi|420313427|ref|ZP_14815335.1| ATP-dependent protease La [Escherichia coli EC1734]
gi|421810662|ref|ZP_16246473.1| ATP-dependent protease La [Escherichia coli 8.0416]
gi|421816755|ref|ZP_16252318.1| ATP-dependent protease La [Escherichia coli 10.0821]
gi|421822140|ref|ZP_16257578.1| ATP-dependent protease La [Escherichia coli FRIK920]
gi|421828873|ref|ZP_16264203.1| ATP-dependent protease La [Escherichia coli PA7]
gi|423652934|ref|ZP_17628237.1| ATP-dependent protease La [Escherichia coli PA31]
gi|424075301|ref|ZP_17812665.1| ATP-dependent protease La [Escherichia coli FDA505]
gi|424081629|ref|ZP_17818505.1| ATP-dependent protease La [Escherichia coli FDA517]
gi|424088250|ref|ZP_17824525.1| ATP-dependent protease La [Escherichia coli FRIK1996]
gi|424094469|ref|ZP_17830244.1| ATP-dependent protease La [Escherichia coli FRIK1985]
gi|424100871|ref|ZP_17836050.1| ATP-dependent protease La [Escherichia coli FRIK1990]
gi|424107684|ref|ZP_17842278.1| ATP-dependent protease La [Escherichia coli 93-001]
gi|424113673|ref|ZP_17847841.1| ATP-dependent protease La [Escherichia coli PA3]
gi|424119735|ref|ZP_17853465.1| ATP-dependent protease La [Escherichia coli PA5]
gi|424125995|ref|ZP_17859213.1| ATP-dependent protease La [Escherichia coli PA9]
gi|424132078|ref|ZP_17864897.1| ATP-dependent protease La [Escherichia coli PA10]
gi|424138624|ref|ZP_17870936.1| ATP-dependent protease La [Escherichia coli PA14]
gi|424145064|ref|ZP_17876851.1| ATP-dependent protease La [Escherichia coli PA15]
gi|424151210|ref|ZP_17882481.1| ATP-dependent protease La [Escherichia coli PA24]
gi|424184948|ref|ZP_17887914.1| ATP-dependent protease La [Escherichia coli PA25]
gi|424266453|ref|ZP_17893816.1| ATP-dependent protease La [Escherichia coli PA28]
gi|424421802|ref|ZP_17899545.1| ATP-dependent protease La [Escherichia coli PA32]
gi|424453618|ref|ZP_17905173.1| ATP-dependent protease La [Escherichia coli PA33]
gi|424459916|ref|ZP_17910874.1| ATP-dependent protease La [Escherichia coli PA39]
gi|424466385|ref|ZP_17916593.1| ATP-dependent protease La [Escherichia coli PA41]
gi|424472946|ref|ZP_17922639.1| ATP-dependent protease La [Escherichia coli PA42]
gi|424478894|ref|ZP_17928157.1| ATP-dependent protease La [Escherichia coli TW07945]
gi|424484964|ref|ZP_17933848.1| ATP-dependent protease La [Escherichia coli TW09098]
gi|424491086|ref|ZP_17939500.1| ATP-dependent protease La [Escherichia coli TW09195]
gi|424498175|ref|ZP_17945465.1| ATP-dependent protease La [Escherichia coli EC4203]
gi|424504404|ref|ZP_17951200.1| ATP-dependent protease La [Escherichia coli EC4196]
gi|424510662|ref|ZP_17956916.1| ATP-dependent protease La [Escherichia coli TW14313]
gi|424518230|ref|ZP_17962676.1| ATP-dependent protease La [Escherichia coli TW14301]
gi|424524059|ref|ZP_17968100.1| ATP-dependent protease La [Escherichia coli EC4421]
gi|424530267|ref|ZP_17973913.1| ATP-dependent protease La [Escherichia coli EC4422]
gi|424536241|ref|ZP_17979520.1| ATP-dependent protease La [Escherichia coli EC4013]
gi|424542149|ref|ZP_17984986.1| ATP-dependent protease La [Escherichia coli EC4402]
gi|424548473|ref|ZP_17990697.1| ATP-dependent protease La [Escherichia coli EC4439]
gi|424554737|ref|ZP_17996475.1| ATP-dependent protease La [Escherichia coli EC4436]
gi|424561084|ref|ZP_18002385.1| ATP-dependent protease La [Escherichia coli EC4437]
gi|424567112|ref|ZP_18008044.1| ATP-dependent protease La [Escherichia coli EC4448]
gi|424573300|ref|ZP_18013739.1| ATP-dependent protease La [Escherichia coli EC1845]
gi|424579255|ref|ZP_18019204.1| ATP-dependent protease La [Escherichia coli EC1863]
gi|425095926|ref|ZP_18498967.1| ATP-dependent protease La [Escherichia coli 3.4870]
gi|425102065|ref|ZP_18504730.1| ATP-dependent protease La [Escherichia coli 5.2239]
gi|425107866|ref|ZP_18510134.1| ATP-dependent protease La [Escherichia coli 6.0172]
gi|425123688|ref|ZP_18525282.1| ATP-dependent protease La [Escherichia coli 8.0586]
gi|425129728|ref|ZP_18530844.1| ATP-dependent protease La [Escherichia coli 8.2524]
gi|425136068|ref|ZP_18536807.1| ATP-dependent protease La [Escherichia coli 10.0833]
gi|425148286|ref|ZP_18548197.1| ATP-dependent protease La [Escherichia coli 88.0221]
gi|425153904|ref|ZP_18553467.1| ATP-dependent protease La [Escherichia coli PA34]
gi|425160353|ref|ZP_18559542.1| ATP-dependent protease La [Escherichia coli FDA506]
gi|425165863|ref|ZP_18564687.1| ATP-dependent protease La [Escherichia coli FDA507]
gi|425172156|ref|ZP_18570570.1| ATP-dependent protease La [Escherichia coli FDA504]
gi|425178036|ref|ZP_18576105.1| ATP-dependent protease La [Escherichia coli FRIK1999]
gi|425184185|ref|ZP_18581824.1| ATP-dependent protease La [Escherichia coli FRIK1997]
gi|425190936|ref|ZP_18588077.1| ATP-dependent protease La [Escherichia coli NE1487]
gi|425197265|ref|ZP_18593930.1| ATP-dependent protease La [Escherichia coli NE037]
gi|425203926|ref|ZP_18600070.1| ATP-dependent protease La [Escherichia coli FRIK2001]
gi|425209681|ref|ZP_18605432.1| ATP-dependent protease La [Escherichia coli PA4]
gi|425215721|ref|ZP_18611054.1| ATP-dependent protease La [Escherichia coli PA23]
gi|425222291|ref|ZP_18617165.1| ATP-dependent protease La [Escherichia coli PA49]
gi|425228536|ref|ZP_18622947.1| ATP-dependent protease La [Escherichia coli PA45]
gi|425234836|ref|ZP_18628810.1| ATP-dependent protease La [Escherichia coli TT12B]
gi|425240841|ref|ZP_18634491.1| ATP-dependent protease La [Escherichia coli MA6]
gi|425252696|ref|ZP_18645588.1| ATP-dependent protease La [Escherichia coli CB7326]
gi|425292565|ref|ZP_18683164.1| ATP-dependent protease La [Escherichia coli PA38]
gi|425309308|ref|ZP_18698788.1| ATP-dependent protease La [Escherichia coli EC1735]
gi|425315221|ref|ZP_18704311.1| ATP-dependent protease La [Escherichia coli EC1736]
gi|425321274|ref|ZP_18709961.1| ATP-dependent protease La [Escherichia coli EC1737]
gi|425327466|ref|ZP_18715702.1| ATP-dependent protease La [Escherichia coli EC1846]
gi|425333651|ref|ZP_18721384.1| ATP-dependent protease La [Escherichia coli EC1847]
gi|425340072|ref|ZP_18727327.1| ATP-dependent protease La [Escherichia coli EC1848]
gi|425345950|ref|ZP_18732766.1| ATP-dependent protease La [Escherichia coli EC1849]
gi|425352163|ref|ZP_18738557.1| ATP-dependent protease La [Escherichia coli EC1850]
gi|425358153|ref|ZP_18744139.1| ATP-dependent protease La [Escherichia coli EC1856]
gi|425364263|ref|ZP_18749826.1| ATP-dependent protease La [Escherichia coli EC1862]
gi|425370708|ref|ZP_18755684.1| ATP-dependent protease La [Escherichia coli EC1864]
gi|425383502|ref|ZP_18767393.1| ATP-dependent protease La [Escherichia coli EC1866]
gi|425390202|ref|ZP_18773672.1| ATP-dependent protease La [Escherichia coli EC1868]
gi|425396320|ref|ZP_18779378.1| ATP-dependent protease La [Escherichia coli EC1869]
gi|425402305|ref|ZP_18784921.1| ATP-dependent protease La [Escherichia coli EC1870]
gi|425408846|ref|ZP_18791013.1| ATP-dependent protease La [Escherichia coli NE098]
gi|425415116|ref|ZP_18796766.1| ATP-dependent protease La [Escherichia coli FRIK523]
gi|425426272|ref|ZP_18807333.1| ATP-dependent protease La [Escherichia coli 0.1304]
gi|428944921|ref|ZP_19017580.1| ATP-dependent protease La [Escherichia coli 88.1467]
gi|428951075|ref|ZP_19023221.1| ATP-dependent protease La [Escherichia coli 88.1042]
gi|428956931|ref|ZP_19028641.1| ATP-dependent protease La [Escherichia coli 89.0511]
gi|428963263|ref|ZP_19034459.1| ATP-dependent protease La [Escherichia coli 90.0091]
gi|428969329|ref|ZP_19039971.1| ATP-dependent protease La [Escherichia coli 90.0039]
gi|428975879|ref|ZP_19046060.1| ATP-dependent protease La [Escherichia coli 90.2281]
gi|428981576|ref|ZP_19051322.1| ATP-dependent protease La [Escherichia coli 93.0055]
gi|428987881|ref|ZP_19057181.1| ATP-dependent protease La [Escherichia coli 93.0056]
gi|428993693|ref|ZP_19062608.1| ATP-dependent protease La [Escherichia coli 94.0618]
gi|428999792|ref|ZP_19068310.1| ATP-dependent protease La [Escherichia coli 95.0183]
gi|429006034|ref|ZP_19073958.1| ATP-dependent protease La [Escherichia coli 95.1288]
gi|429012379|ref|ZP_19079640.1| ATP-dependent protease La [Escherichia coli 95.0943]
gi|429018495|ref|ZP_19085288.1| ATP-dependent protease La [Escherichia coli 96.0428]
gi|429024269|ref|ZP_19090689.1| ATP-dependent protease La [Escherichia coli 96.0427]
gi|429030583|ref|ZP_19096469.1| ATP-dependent protease La [Escherichia coli 96.0939]
gi|429036769|ref|ZP_19102218.1| ATP-dependent protease La [Escherichia coli 96.0932]
gi|429042633|ref|ZP_19107647.1| ATP-dependent protease La [Escherichia coli 96.0107]
gi|429048497|ref|ZP_19113157.1| ATP-dependent protease La [Escherichia coli 97.0003]
gi|429053860|ref|ZP_19118356.1| ATP-dependent protease La [Escherichia coli 97.1742]
gi|429059553|ref|ZP_19123705.1| ATP-dependent protease La [Escherichia coli 97.0007]
gi|429064998|ref|ZP_19128867.1| ATP-dependent protease La [Escherichia coli 99.0672]
gi|429071565|ref|ZP_19134922.1| ATP-dependent protease La [Escherichia coli 99.0678]
gi|429076830|ref|ZP_19140050.1| ATP-dependent protease La [Escherichia coli 99.0713]
gi|429824046|ref|ZP_19355563.1| ATP-dependent protease La [Escherichia coli 96.0109]
gi|429830414|ref|ZP_19361281.1| ATP-dependent protease La [Escherichia coli 97.0010]
gi|444922757|ref|ZP_21242480.1| ATP-dependent protease La [Escherichia coli 09BKT078844]
gi|444929079|ref|ZP_21248233.1| ATP-dependent protease La [Escherichia coli 99.0814]
gi|444934429|ref|ZP_21253373.1| ATP-dependent protease La [Escherichia coli 99.0815]
gi|444940008|ref|ZP_21258657.1| ATP-dependent protease La [Escherichia coli 99.0816]
gi|444945663|ref|ZP_21264085.1| ATP-dependent protease La [Escherichia coli 99.0839]
gi|444951155|ref|ZP_21269381.1| ATP-dependent protease La [Escherichia coli 99.0848]
gi|444956609|ref|ZP_21274611.1| ATP-dependent protease La [Escherichia coli 99.1753]
gi|444961953|ref|ZP_21279707.1| ATP-dependent protease La [Escherichia coli 99.1775]
gi|444967644|ref|ZP_21285121.1| ATP-dependent protease La [Escherichia coli 99.1793]
gi|444973146|ref|ZP_21290429.1| ATP-dependent protease La [Escherichia coli 99.1805]
gi|444978686|ref|ZP_21295684.1| ATP-dependent protease La [Escherichia coli ATCC 700728]
gi|444983980|ref|ZP_21300850.1| ATP-dependent protease La [Escherichia coli PA11]
gi|444989223|ref|ZP_21305965.1| ATP-dependent protease La [Escherichia coli PA19]
gi|444994577|ref|ZP_21311174.1| ATP-dependent protease La [Escherichia coli PA13]
gi|445000073|ref|ZP_21316537.1| ATP-dependent protease La [Escherichia coli PA2]
gi|445005529|ref|ZP_21321870.1| ATP-dependent protease La [Escherichia coli PA47]
gi|445016484|ref|ZP_21332535.1| ATP-dependent protease La [Escherichia coli PA8]
gi|445021931|ref|ZP_21337854.1| ATP-dependent protease La [Escherichia coli 7.1982]
gi|445027173|ref|ZP_21342953.1| ATP-dependent protease La [Escherichia coli 99.1781]
gi|445032668|ref|ZP_21348294.1| ATP-dependent protease La [Escherichia coli 99.1762]
gi|445038361|ref|ZP_21353832.1| ATP-dependent protease La [Escherichia coli PA35]
gi|445043576|ref|ZP_21358916.1| ATP-dependent protease La [Escherichia coli 3.4880]
gi|445049148|ref|ZP_21364319.1| ATP-dependent protease La [Escherichia coli 95.0083]
gi|445054798|ref|ZP_21369751.1| ATP-dependent protease La [Escherichia coli 99.0670]
gi|452969100|ref|ZP_21967327.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. EC4009]
gi|13359950|dbj|BAB33916.1| endopeptidase La [Escherichia coli O157:H7 str. Sakai]
gi|189357958|gb|EDU76377.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4401]
gi|189362422|gb|EDU80841.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4486]
gi|189369044|gb|EDU87460.1| ATP-dependent protease La [Escherichia coli O157:H7 str. EC4501]
gi|254591023|gb|ACT70384.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. TW14359]
gi|326341203|gb|EGD64995.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. 1044]
gi|326346022|gb|EGD69761.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. 1125]
gi|377900385|gb|EHU64717.1| ATP-dependent protease La [Escherichia coli DEC3A]
gi|377902537|gb|EHU66841.1| ATP-dependent protease La [Escherichia coli DEC3B]
gi|377918755|gb|EHU82802.1| ATP-dependent protease La [Escherichia coli DEC3D]
gi|377934478|gb|EHU98309.1| ATP-dependent protease La [Escherichia coli DEC4A]
gi|377950432|gb|EHV14059.1| ATP-dependent protease La [Escherichia coli DEC4C]
gi|377951243|gb|EHV14862.1| ATP-dependent protease La [Escherichia coli DEC4D]
gi|377955449|gb|EHV19005.1| ATP-dependent protease La [Escherichia coli DEC4E]
gi|390650821|gb|EIN29194.1| ATP-dependent protease La [Escherichia coli FRIK1996]
gi|390652873|gb|EIN31045.1| ATP-dependent protease La [Escherichia coli FDA517]
gi|390653354|gb|EIN31501.1| ATP-dependent protease La [Escherichia coli FDA505]
gi|390669798|gb|EIN46391.1| ATP-dependent protease La [Escherichia coli 93-001]
gi|390673009|gb|EIN49262.1| ATP-dependent protease La [Escherichia coli FRIK1990]
gi|390674121|gb|EIN50328.1| ATP-dependent protease La [Escherichia coli FRIK1985]
gi|390688662|gb|EIN63694.1| ATP-dependent protease La [Escherichia coli PA3]
gi|390692172|gb|EIN66870.1| ATP-dependent protease La [Escherichia coli PA9]
gi|390693118|gb|EIN67758.1| ATP-dependent protease La [Escherichia coli PA5]
gi|390708497|gb|EIN81717.1| ATP-dependent protease La [Escherichia coli PA10]
gi|390710385|gb|EIN83407.1| ATP-dependent protease La [Escherichia coli PA15]
gi|390713049|gb|EIN85992.1| ATP-dependent protease La [Escherichia coli PA14]
gi|390720323|gb|EIN93035.1| ATP-dependent protease La [Escherichia coli PA22]
gi|390733694|gb|EIO05255.1| ATP-dependent protease La [Escherichia coli PA25]
gi|390733922|gb|EIO05481.1| ATP-dependent protease La [Escherichia coli PA24]
gi|390736963|gb|EIO08278.1| ATP-dependent protease La [Escherichia coli PA28]
gi|390752250|gb|EIO22096.1| ATP-dependent protease La [Escherichia coli PA31]
gi|390752772|gb|EIO22578.1| ATP-dependent protease La [Escherichia coli PA32]
gi|390755181|gb|EIO24729.1| ATP-dependent protease La [Escherichia coli PA33]
gi|390762423|gb|EIO31681.1| ATP-dependent protease La [Escherichia coli PA40]
gi|390776245|gb|EIO44196.1| ATP-dependent protease La [Escherichia coli PA41]
gi|390778746|gb|EIO46503.1| ATP-dependent protease La [Escherichia coli PA42]
gi|390784224|gb|EIO51797.1| ATP-dependent protease La [Escherichia coli PA39]
gi|390795075|gb|EIO62360.1| ATP-dependent protease La [Escherichia coli TW10246]
gi|390801806|gb|EIO68857.1| ATP-dependent protease La [Escherichia coli TW11039]
gi|390810370|gb|EIO77131.1| ATP-dependent protease La [Escherichia coli TW07945]
gi|390812008|gb|EIO78693.1| ATP-dependent protease La [Escherichia coli TW09109]
gi|390819496|gb|EIO85829.1| ATP-dependent protease La [Escherichia coli TW10119]
gi|390823103|gb|EIO89175.1| ATP-dependent protease La [Escherichia coli TW09098]
gi|390837208|gb|EIP01639.1| ATP-dependent protease La [Escherichia coli EC4203]
gi|390840106|gb|EIP04165.1| ATP-dependent protease La [Escherichia coli EC4196]
gi|390842296|gb|EIP06150.1| ATP-dependent protease La [Escherichia coli TW09195]
gi|390855664|gb|EIP18346.1| ATP-dependent protease La [Escherichia coli TW14301]
gi|390860053|gb|EIP22380.1| ATP-dependent protease La [Escherichia coli EC4421]
gi|390860505|gb|EIP22819.1| ATP-dependent protease La [Escherichia coli TW14313]
gi|390871775|gb|EIP33155.1| ATP-dependent protease La [Escherichia coli EC4422]
gi|390876377|gb|EIP37363.1| ATP-dependent protease La [Escherichia coli EC4013]
gi|390886143|gb|EIP46281.1| ATP-dependent protease La [Escherichia coli EC4402]
gi|390888191|gb|EIP48087.1| ATP-dependent protease La [Escherichia coli EC4439]
gi|390894973|gb|EIP54463.1| ATP-dependent protease La [Escherichia coli EC4436]
gi|390904223|gb|EIP63239.1| ATP-dependent protease La [Escherichia coli EC1738]
gi|390910630|gb|EIP69361.1| ATP-dependent protease La [Escherichia coli EC4437]
gi|390911992|gb|EIP70673.1| ATP-dependent protease La [Escherichia coli EC1734]
gi|390915107|gb|EIP73625.1| ATP-dependent protease La [Escherichia coli EC4448]
gi|390925022|gb|EIP82758.1| ATP-dependent protease La [Escherichia coli EC1863]
gi|390926192|gb|EIP83786.1| ATP-dependent protease La [Escherichia coli EC1845]
gi|408072551|gb|EKH06872.1| ATP-dependent protease La [Escherichia coli PA7]
gi|408076060|gb|EKH10289.1| ATP-dependent protease La [Escherichia coli FRIK920]
gi|408086073|gb|EKH19615.1| ATP-dependent protease La [Escherichia coli PA34]
gi|408090669|gb|EKH23940.1| ATP-dependent protease La [Escherichia coli FDA506]
gi|408095714|gb|EKH28679.1| ATP-dependent protease La [Escherichia coli FDA507]
gi|408102857|gb|EKH35246.1| ATP-dependent protease La [Escherichia coli FDA504]
gi|408110230|gb|EKH42057.1| ATP-dependent protease La [Escherichia coli FRIK1999]
gi|408116884|gb|EKH48151.1| ATP-dependent protease La [Escherichia coli FRIK1997]
gi|408122385|gb|EKH53247.1| ATP-dependent protease La [Escherichia coli NE1487]
gi|408130329|gb|EKH60477.1| ATP-dependent protease La [Escherichia coli NE037]
gi|408132504|gb|EKH62480.1| ATP-dependent protease La [Escherichia coli FRIK2001]
gi|408141725|gb|EKH71180.1| ATP-dependent protease La [Escherichia coli PA4]
gi|408150526|gb|EKH79108.1| ATP-dependent protease La [Escherichia coli PA23]
gi|408153311|gb|EKH81706.1| ATP-dependent protease La [Escherichia coli PA49]
gi|408158628|gb|EKH86745.1| ATP-dependent protease La [Escherichia coli PA45]
gi|408167184|gb|EKH94711.1| ATP-dependent protease La [Escherichia coli TT12B]
gi|408172670|gb|EKH99733.1| ATP-dependent protease La [Escherichia coli MA6]
gi|408187058|gb|EKI13039.1| ATP-dependent protease La [Escherichia coli CB7326]
gi|408233177|gb|EKI56312.1| ATP-dependent protease La [Escherichia coli PA38]
gi|408239325|gb|EKI62078.1| ATP-dependent protease La [Escherichia coli EC1735]
gi|408249188|gb|EKI71140.1| ATP-dependent protease La [Escherichia coli EC1736]
gi|408253461|gb|EKI75055.1| ATP-dependent protease La [Escherichia coli EC1737]
gi|408259575|gb|EKI80734.1| ATP-dependent protease La [Escherichia coli EC1846]
gi|408268458|gb|EKI88814.1| ATP-dependent protease La [Escherichia coli EC1847]
gi|408270233|gb|EKI90442.1| ATP-dependent protease La [Escherichia coli EC1848]
gi|408278944|gb|EKI98611.1| ATP-dependent protease La [Escherichia coli EC1849]
gi|408285363|gb|EKJ04393.1| ATP-dependent protease La [Escherichia coli EC1850]
gi|408288148|gb|EKJ06986.1| ATP-dependent protease La [Escherichia coli EC1856]
gi|408300619|gb|EKJ18304.1| ATP-dependent protease La [Escherichia coli EC1862]
gi|408301171|gb|EKJ18825.1| ATP-dependent protease La [Escherichia coli EC1864]
gi|408318338|gb|EKJ34553.1| ATP-dependent protease La [Escherichia coli EC1868]
gi|408318839|gb|EKJ35041.1| ATP-dependent protease La [Escherichia coli EC1866]
gi|408331657|gb|EKJ46801.1| ATP-dependent protease La [Escherichia coli EC1869]
gi|408337305|gb|EKJ52041.1| ATP-dependent protease La [Escherichia coli NE098]
gi|408338662|gb|EKJ53308.1| ATP-dependent protease La [Escherichia coli EC1870]
gi|408350647|gb|EKJ64495.1| ATP-dependent protease La [Escherichia coli FRIK523]
gi|408353296|gb|EKJ66818.1| ATP-dependent protease La [Escherichia coli 0.1304]
gi|408559152|gb|EKK35495.1| ATP-dependent protease La [Escherichia coli 5.2239]
gi|408559380|gb|EKK35703.1| ATP-dependent protease La [Escherichia coli 3.4870]
gi|408560351|gb|EKK36615.1| ATP-dependent protease La [Escherichia coli 6.0172]
gi|408585480|gb|EKK60347.1| ATP-dependent protease La [Escherichia coli 8.0586]
gi|408590506|gb|EKK64981.1| ATP-dependent protease La [Escherichia coli 8.2524]
gi|408592321|gb|EKK66713.1| ATP-dependent protease La [Escherichia coli 10.0833]
gi|408605964|gb|EKK79444.1| ATP-dependent protease La [Escherichia coli 8.0416]
gi|408611155|gb|EKK84517.1| ATP-dependent protease La [Escherichia coli 88.0221]
gi|408617330|gb|EKK90452.1| ATP-dependent protease La [Escherichia coli 10.0821]
gi|427214753|gb|EKV84025.1| ATP-dependent protease La [Escherichia coli 88.1042]
gi|427217283|gb|EKV86352.1| ATP-dependent protease La [Escherichia coli 89.0511]
gi|427217769|gb|EKV86821.1| ATP-dependent protease La [Escherichia coli 88.1467]
gi|427233989|gb|EKW01698.1| ATP-dependent protease La [Escherichia coli 90.2281]
gi|427234230|gb|EKW01929.1| ATP-dependent protease La [Escherichia coli 90.0039]
gi|427236320|gb|EKW03901.1| ATP-dependent protease La [Escherichia coli 90.0091]
gi|427251583|gb|EKW18146.1| ATP-dependent protease La [Escherichia coli 93.0056]
gi|427253124|gb|EKW19567.1| ATP-dependent protease La [Escherichia coli 93.0055]
gi|427254459|gb|EKW20820.1| ATP-dependent protease La [Escherichia coli 94.0618]
gi|427270577|gb|EKW35455.1| ATP-dependent protease La [Escherichia coli 95.0943]
gi|427271065|gb|EKW35914.1| ATP-dependent protease La [Escherichia coli 95.0183]
gi|427276298|gb|EKW40872.1| ATP-dependent protease La [Escherichia coli 95.1288]
gi|427286535|gb|EKW50373.1| ATP-dependent protease La [Escherichia coli 96.0428]
gi|427292272|gb|EKW55626.1| ATP-dependent protease La [Escherichia coli 96.0427]
gi|427293897|gb|EKW57117.1| ATP-dependent protease La [Escherichia coli 96.0939]
gi|427304915|gb|EKW67535.1| ATP-dependent protease La [Escherichia coli 97.0003]
gi|427306555|gb|EKW69074.1| ATP-dependent protease La [Escherichia coli 96.0932]
gi|427310955|gb|EKW73175.1| ATP-dependent protease La [Escherichia coli 96.0107]
gi|427321631|gb|EKW83310.1| ATP-dependent protease La [Escherichia coli 97.1742]
gi|427322538|gb|EKW84169.1| ATP-dependent protease La [Escherichia coli 97.0007]
gi|427334472|gb|EKW95541.1| ATP-dependent protease La [Escherichia coli 99.0713]
gi|427334775|gb|EKW95843.1| ATP-dependent protease La [Escherichia coli 99.0678]
gi|427336799|gb|EKW97748.1| ATP-dependent protease La [Escherichia coli 99.0672]
gi|429260206|gb|EKY43799.1| ATP-dependent protease La [Escherichia coli 96.0109]
gi|429261866|gb|EKY45258.1| ATP-dependent protease La [Escherichia coli 97.0010]
gi|444542455|gb|ELV21813.1| ATP-dependent protease La [Escherichia coli 99.0814]
gi|444550933|gb|ELV28951.1| ATP-dependent protease La [Escherichia coli 09BKT078844]
gi|444551800|gb|ELV29676.1| ATP-dependent protease La [Escherichia coli 99.0815]
gi|444565104|gb|ELV42005.1| ATP-dependent protease La [Escherichia coli 99.0839]
gi|444567162|gb|ELV43932.1| ATP-dependent protease La [Escherichia coli 99.0816]
gi|444571481|gb|ELV47963.1| ATP-dependent protease La [Escherichia coli 99.0848]
gi|444582366|gb|ELV58160.1| ATP-dependent protease La [Escherichia coli 99.1753]
gi|444585164|gb|ELV60744.1| ATP-dependent protease La [Escherichia coli 99.1775]
gi|444586125|gb|ELV61646.1| ATP-dependent protease La [Escherichia coli 99.1793]
gi|444600005|gb|ELV74861.1| ATP-dependent protease La [Escherichia coli ATCC 700728]
gi|444600471|gb|ELV75307.1| ATP-dependent protease La [Escherichia coli PA11]
gi|444608388|gb|ELV82921.1| ATP-dependent protease La [Escherichia coli 99.1805]
gi|444614925|gb|ELV89150.1| ATP-dependent protease La [Escherichia coli PA13]
gi|444615591|gb|ELV89795.1| ATP-dependent protease La [Escherichia coli PA19]
gi|444623580|gb|ELV97500.1| ATP-dependent protease La [Escherichia coli PA2]
gi|444632893|gb|ELW06442.1| ATP-dependent protease La [Escherichia coli PA47]
gi|444637806|gb|ELW11171.1| ATP-dependent protease La [Escherichia coli PA8]
gi|444647986|gb|ELW20942.1| ATP-dependent protease La [Escherichia coli 7.1982]
gi|444650092|gb|ELW22944.1| ATP-dependent protease La [Escherichia coli 99.1781]
gi|444654182|gb|ELW26876.1| ATP-dependent protease La [Escherichia coli 99.1762]
gi|444663163|gb|ELW35408.1| ATP-dependent protease La [Escherichia coli PA35]
gi|444667436|gb|ELW39474.1| ATP-dependent protease La [Escherichia coli 3.4880]
gi|444672859|gb|ELW44545.1| ATP-dependent protease La [Escherichia coli 95.0083]
gi|444674582|gb|ELW46112.1| ATP-dependent protease La [Escherichia coli 99.0670]
Length = 784
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E L++DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILNTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|432541815|ref|ZP_19778676.1| lon protease [Escherichia coli KTE236]
gi|432547159|ref|ZP_19783956.1| lon protease [Escherichia coli KTE237]
gi|431078332|gb|ELD85390.1| lon protease [Escherichia coli KTE236]
gi|431085332|gb|ELD91445.1| lon protease [Escherichia coli KTE237]
Length = 784
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RG+PASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGEPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|332305576|ref|YP_004433427.1| ATP-dependent protease La [Glaciecola sp. 4H-3-7+YE-5]
gi|410646703|ref|ZP_11357153.1| ATP-dependent Lon protease [Glaciecola agarilytica NO2]
gi|332172905|gb|AEE22159.1| ATP-dependent protease La [Glaciecola sp. 4H-3-7+YE-5]
gi|410133875|dbj|GAC05552.1| ATP-dependent Lon protease [Glaciecola agarilytica NO2]
Length = 788
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 326/764 (42%), Positives = 459/764 (60%), Gaps = 85/764 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQD----------P 113
P G V V++EG R + + + ++ A IS+ E +E+E+ EQ+
Sbjct: 84 PDGTVK--VLVEGNQRAQIADFVSTEDFFVANISNKE--DLEVEENEQEVIIRSAISQFE 139
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
++ L+++ + +S +EQ + LAD A + E+ +
Sbjct: 140 GYVKLNKKIPPEVLTSLSGIEQAAR----------------LADTMAAHMPLKLAEKQKV 183
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L+ + RL L++ + ++V +KI +V+ Q+ KSQ+E+ L +QM+AI++ELG+
Sbjct: 184 LEMDQVNDRLEYLMALMESEIDLLQVEKKIRTRVKKQMEKSQREYYLNEQMKAIQKELGE 243
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
D+ D+ AL +K+ A MP K EL +LK M P T R Y++ + ++PW
Sbjct: 244 LDEAPDEFEALSKKIDDAKMPEEAKKKATTELSKLKMMSPMSAEATVVRSYIDWLTNVPW 303
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
K S + DL AA + LD++HYGL +VK+RIIEYLAV++ +GP+LC VGPPGVGK
Sbjct: 304 TKRSA-VKKDLAAADKLLDTEHYGLEKVKERIIEYLAVQQRVRKLKGPILCLVGPPGVGK 362
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LL
Sbjct: 363 TSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLL 422
Query: 414 DEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPL 473
DEIDK SD+RGDP+SALLEVLDPEQN TF+DHYL V +DLS V+FVAT+N + IP PL
Sbjct: 423 DEIDKMSSDMRGDPSSALLEVLDPEQNSTFSDHYLEVDYDLSDVMFVATSN-SMDIPGPL 481
Query: 474 LDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGV 533
LDRMEVI L GYT +EKL IA RHL+ + + ++GL S+ L I E+ + +I+ YTREAGV
Sbjct: 482 LDRMEVIRLSGYTEDEKLNIATRHLLEKQISRNGLKSKELIIEESAIIGMIRHYTREAGV 541
Query: 534 RNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGE 593
R+LER ++ + R A + LL+
Sbjct: 542 RSLEREISKVCRKAVKNI---------------------LLN------------------ 562
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
+ T + V E L + LG RF D AE G GL WT GGE+
Sbjct: 563 ---------KDTKTVTVTEKNLSEYLGVQRF-DYGKAEDNNQIGQVTGLAWTQVGGELLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+EAT++ GKG++ TG LGDV++ES Q A+T VR+R+ L++ + + + RDIH+H
Sbjct: 613 IEATSVVGKGKMTSTGSLGDVMQESIQTAMTVVRSRSEKLRINS----DFHEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TAL+S + VR D AMTGE+TLRG VL +GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIGMCTALISALTGNPVRCDVAMTGEITLRGEVLAIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GIK VI+P+ N +DL E+P V L I + ++DVLE A +
Sbjct: 729 GGIKTVIIPKENERDLQEIPDNVKQDLSIHPVRWIDDVLELALQ 772
>gi|389681006|ref|ZP_10172351.1| endopeptidase La [Pseudomonas chlororaphis O6]
gi|388554542|gb|EIM17790.1| endopeptidase La [Pseudomonas chlororaphis O6]
Length = 798
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/664 (46%), Positives = 423/664 (63%), Gaps = 56/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+L D A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +
Sbjct: 160 RLVDTMAAHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMER 219
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELGD D+ +++ L++++ +AG+P + Q EL +LK+M P
Sbjct: 220 SQREYYLNEQMKAIQKELGDGDEGHNEVEELKKRIDAAGLPKDALAKAQAELNKLKQMSP 279
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + +PW KA ++ LDL A++ LD+DHYGL VK+RI+EYLAV+K
Sbjct: 280 MSAEATVVRSYIDWLVQVPW-KAQSKVRLDLARAEDILDADHYGLEEVKERILEYLAVQK 338
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
RGPVLC VGPPGVGKTSLA SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 339 RVKKIRGPVLCLVGPPGVGKTSLAESIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSM 398
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGRLI + +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +D
Sbjct: 399 PGRLIQKMTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYD 458
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+F+ T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL L
Sbjct: 459 LSDVMFLCTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEL 517
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ E ++ +I+ YTREAGVR LER +A + R A +E AL
Sbjct: 518 EFDEEAIRDIIRYYTREAGVRGLERQIAKVCRKAV-------KEHAL------------- 557
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
E + ++TS L LE LG +F AE+
Sbjct: 558 -----------------------EKRFSVKVTSDL------LEHFLGVRKF-RYGLAEQQ 587
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GGE+ +EA + GKG+L TG LGDV+ ES ALT VR+RA L
Sbjct: 588 DQIGQVTGLAWTQVGGELLTIEAAVVPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSL 647
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ ++ + RD HIH P GA PKDGPSAGV + TALVS + VRAD AMTGE+T
Sbjct: 648 GI----PLDFHEKRDTHIHMPEGATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEIT 703
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VL +GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+
Sbjct: 704 LRGQVLAIGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQ 763
Query: 814 QAFE 817
A +
Sbjct: 764 IALQ 767
>gi|114707246|ref|ZP_01440144.1| probable atp-dependent protease la protein [Fulvimarina pelagi
HTCC2506]
gi|114537442|gb|EAU40568.1| probable atp-dependent protease la protein [Fulvimarina pelagi
HTCC2506]
Length = 807
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 329/795 (41%), Positives = 458/795 (57%), Gaps = 85/795 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + I+ + G A L L ++ P G V V++EG+ R ++ S R
Sbjct: 59 TQKNASDEDPTADAIY--DIGTVANVLQL---LKLPDGTVK--VLVEGMSRAKIEGFSDR 111
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLE 148
+Y A S ++ + E DP + +A A ++S E K K+ E
Sbjct: 112 TDWYEASASIIDDS-------EDDP------VELEALARSVVSEFENYVKLN--KKISPE 156
Query: 149 TV-------PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAE 201
V KLAD + I E+ ML + +K RL KA ++ + ++V +
Sbjct: 157 VVGAANQIDDYSKLADTIASHLAIKLPEKQEMLTLISVKDRLEKALGFMESEISVLQVEK 216
Query: 202 KITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHV 261
+I +V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D++ LE +++ +
Sbjct: 217 RIRSRVKRQMEKTQREYYLNEQMKAIQKELGDGEDGRDEMAELEERIKKTKLSKEARDKA 276
Query: 262 QKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRV 321
E+++LK+M P T R YL+ + LPW S +DLK A++ LD DHYGL +V
Sbjct: 277 NAEMKKLKQMSPMSAESTVVRNYLDWLLGLPWGTRSR-AKIDLKKAEDILDGDHYGLEKV 335
Query: 322 KQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEAD 381
K+RI+EYLAV+ + +GP+LC VGPPGVGKTSLA SIA A GR+++R++LGGV+DEA+
Sbjct: 336 KERIVEYLAVQSRQSKLKGPILCLVGPPGVGKTSLAKSIAKATGREYVRMALGGVRDEAE 395
Query: 382 IRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK 441
IRGHRRTYIGSMPG++I +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN
Sbjct: 396 IRGHRRTYIGSMPGKVIQSMKKAKKSNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNS 455
Query: 442 TFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPR 501
TF DHYL V +DLS V+FV TAN IP PL+DRMEVI + GYT +EK+ IA RHL+ +
Sbjct: 456 TFMDHYLEVEYDLSPVMFVTTANTLN-IPGPLMDRMEVIRIAGYTEDEKVEIAKRHLLQK 514
Query: 502 VLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALP 561
+ H L I + + + +RYTREAGVRN ER L LAR A + + E E
Sbjct: 515 AIRDHALKESEFSIDDGALYEIARRYTREAGVRNFERELMTLARKAVTTILKGETE---- 570
Query: 562 SSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGP 621
T IT+ + D ++K
Sbjct: 571 ---------------------------------------TVHITAENISDYLGVQKF--- 588
Query: 622 PRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
RF + E ++V G+ GL WT GGE+ +E M GKG++ +TG L +V+KES
Sbjct: 589 -RFGEAETEDQV---GVVTGLAWTEVGGELLTIEGMMMPGKGKMTVTGNLKEVMKESISA 644
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VRARA D + L + RDIH+H P GA PKDGPSAG + TA++S+ +
Sbjct: 645 AASYVRARALDYGVKPP----LFEKRDIHVHVPEGATPKDGPSAGTAMATAIISVLTGIP 700
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR D AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL E+P V +LE
Sbjct: 701 VRRDIAMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLAEIPDNVKNNLE 760
Query: 802 IILAKRMEDVLEQAF 816
I+ RM +VL+ A
Sbjct: 761 IVPVSRMGEVLKHAL 775
>gi|28870879|ref|NP_793498.1| ATP-dependent protease La [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213968836|ref|ZP_03396977.1| ATP-dependent protease La [Pseudomonas syringae pv. tomato T1]
gi|302059519|ref|ZP_07251060.1| ATP-dependent protease La [Pseudomonas syringae pv. tomato K40]
gi|302135030|ref|ZP_07261020.1| ATP-dependent protease La [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|422660630|ref|ZP_16723038.1| ATP-dependent protease La [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28854128|gb|AAO57193.1| ATP-dependent protease La [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213926439|gb|EEB59993.1| ATP-dependent protease La [Pseudomonas syringae pv. tomato T1]
gi|331019231|gb|EGH99287.1| ATP-dependent protease La [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 798
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/777 (42%), Positives = 465/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRTYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL +Q EA +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEVQFDEAAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKA--------------------------------- 551
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ E T E + ++T+ MLE LG +F AE+ G
Sbjct: 552 ----------VKEHTMEKRFSVQVTA------EMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|416780508|ref|ZP_11876894.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. G5101]
gi|425141968|ref|ZP_18542275.1| ATP-dependent protease La [Escherichia coli 10.0869]
gi|425259007|ref|ZP_18651385.1| ATP-dependent protease La [Escherichia coli EC96038]
gi|445010702|ref|ZP_21326896.1| ATP-dependent protease La [Escherichia coli PA48]
gi|320638434|gb|EFX08148.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. G5101]
gi|408192243|gb|EKI17820.1| ATP-dependent protease La [Escherichia coli EC96038]
gi|408604558|gb|EKK78132.1| ATP-dependent protease La [Escherichia coli 10.0869]
gi|444632672|gb|ELW06227.1| ATP-dependent protease La [Escherichia coli PA48]
Length = 784
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 462/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E L++DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILNTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGTPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|330808574|ref|YP_004353036.1| endopeptidase La [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423696406|ref|ZP_17670896.1| endopeptidase La [Pseudomonas fluorescens Q8r1-96]
gi|327376682|gb|AEA68032.1| endopeptidase La (ATP-dependent protease La) [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|388004025|gb|EIK65352.1| endopeptidase La [Pseudomonas fluorescens Q8r1-96]
Length = 798
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/759 (43%), Positives = 460/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +++ S + A +S +E + A R+ +
Sbjct: 80 PDGTVK--VLVEGEQRGAIERFSEVDGHCRAEVSLIE-------------EVDAPERESE 124
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 125 VFVRSLLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD D+
Sbjct: 185 LSARVEHVLALLDGEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEIEELKKRIDAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ E ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGELEFDEEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A +E A L+ R A
Sbjct: 543 QIAKVCRKAV-------KEHA--------------LEKRFA------------------- 562
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
++T+ L LE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 563 ---VKVTADL------LEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRARSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKI 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|261749391|ref|YP_003257076.1| ATP-dependent protease [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
gi|261497483|gb|ACX83933.1| ATP-dependent protease [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
Length = 800
Score = 565 bits (1455), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/769 (40%), Positives = 455/769 (59%), Gaps = 70/769 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V+L+G RF V + Y+ A I +LE K
Sbjct: 100 GTVAKILKL---LKMPDGNTT--VILQGKRRFKVSRFIQKDPYFKAEILALEEKKPSC-- 152
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVA-SFEISF 167
+D +++AL K A I +++ + + + FVA + ++
Sbjct: 153 --KDKEYLALVESIKEIA---IKIIQDNPNIPSEASIAIRNIESPSFLINFVAANMNLAT 207
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
++ +L+ DLK R + ++ Q I++ I +V + + Q+E+ L QQ++AI
Sbjct: 208 RDKQKLLEYDDLKKRAMETLRFLNVEHQQIKLKNDIQSRVRSDMDQQQREYFLHQQIKAI 267
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
+EELGD E ++ + K K +EL ++++ PQ P YT R YLEL
Sbjct: 268 QEELGDISY-EKEIDEMRAKSSRKKWSKEAKKQFDRELLKMQRTNPQMPEYTVQRNYLEL 326
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
+ DLPW K S++ DL+ A++ LD DHYGL +VK+RIIEYLAV KL+ D R P+LCF G
Sbjct: 327 MIDLPWGKYSKD-SFDLEFAQKILDRDHYGLEKVKERIIEYLAVLKLRGDMRSPILCFYG 385
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL SIA+AL RK++RISLGG+ DE++IRGHRRTYIG+MPGRL+ +++VG
Sbjct: 386 PPGVGKTSLGRSIATALKRKYVRISLGGLHDESEIRGHRRTYIGAMPGRLLQSIRKVGTS 445
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDEIDK G GDP+SA+LEVLDPEQN +F D++L + +DLSKV+F+ATAN
Sbjct: 446 NPVFVLDEIDKMGLGANGDPSSAMLEVLDPEQNTSFYDNFLEMGYDLSKVLFIATANSLS 505
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
I P L+DRMEVIE+ GYT EEK +I +H++P+ L ++GL L + ++ VI+ Y
Sbjct: 506 NIQPALIDRMEVIEMNGYTVEEKTKIVKKHILPKQLKENGLKKSDLILGTQQIEKVIESY 565
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TRE+G+R LE+++A LAR AA +A +D + +E
Sbjct: 566 TRESGLRTLEKHMAKLARYAAKHIA---------------------MDRKYVKRLSIE-- 602
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
+E++LG P DR +V PG+ GL WTNF
Sbjct: 603 --------------------------KIEEILGIPNDPDRYEENKV--PGVVTGLAWTNF 634
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGR 707
GG++ ++E++ +GKG L +TG LG+V+KESA IAL +++A D + + + + +
Sbjct: 635 GGDILYIESSLSKGKGNLSITGNLGEVMKESATIALQYIKAHYKDFNIDPK----MFEEQ 690
Query: 708 DIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDK 767
++H+H P GAVPKDGPSAG+T++T+LVS ++++++R AMTGE+TLRG VLPVGG+K+K
Sbjct: 691 NVHVHVPEGAVPKDGPSAGITMLTSLVSSYTKRKLRPHLAMTGEITLRGKVLPVGGIKEK 750
Query: 768 ILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
ILAA R IK +IL + N KD+ E+ L L + M DV+ A
Sbjct: 751 ILAAKRANIKEIILSQDNKKDVEEIKQDHLKGLTFDYVRDMNDVIHLAL 799
>gi|15615612|ref|NP_243916.1| ATP-dependent proteinase La 1 [Bacillus halodurans C-125]
gi|10175672|dbj|BAB06769.1| ATP-dependent proteinase La 1 (lon) (class III heat-shock protein)
[Bacillus halodurans C-125]
Length = 774
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 313/760 (41%), Positives = 461/760 (60%), Gaps = 78/760 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R +++ Y A + +E+ + + ++D + + K
Sbjct: 82 PNG--TIRVLVEGLQRAKIEK-------YVANDAFIEVEMCTLPEDDEDN-----ATENK 127
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPI-------HKLADIFVASFEISFEEQLVMLDS 176
A ++ + EQ K KV ET+ +LAD+ + + E+ +L++
Sbjct: 128 ALMRNVLQLFEQYIKLS--KKVSAETLASVSDIAEPGRLADVIASHLPLKIVEKQQLLET 185
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+K RL + ++++ + I + +KI Q+V+ + ++QKE+ LR+QM+AI++ELGD +
Sbjct: 186 TSVKERLLQVIDVLNNEKEVIGLEKKIGQRVKKSMERTQKEYYLREQMKAIQKELGDKEG 245
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
++ +L ++ A MP N+ + KEL R +KM + R YL+ + LPW K
Sbjct: 246 KTGEVASLREQIDEANMPENVEEKALKELERYEKMPASSAESSVLRNYLDWLIQLPWVKE 305
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
+E+I LD+ A+ LD DHYGL +VK+R+IEYLAV++L + +GP+LC GPPGVGKTSL
Sbjct: 306 TEDI-LDVNRAERILDEDHYGLEKVKERVIEYLAVQQLTKELKGPILCLAGPPGVGKTSL 364
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
A S+A AL R+F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K+ G NPV LLDEI
Sbjct: 365 ARSVARALNREFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKKAGSVNPVFLLDEI 424
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK +D RGDPA+ALLEVLDPEQN TF+DHY+ P+DLSKV+F+ TAN IP PLLDR
Sbjct: 425 DKMANDFRGDPAAALLEVLDPEQNHTFSDHYIEEPYDLSKVMFITTANNIMTIPGPLLDR 484
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
ME+I++ GYT EK RIA+ +L+P+ + +HGL Q+ E + VI+ YTREAGVR+L
Sbjct: 485 MEIIQIAGYTEVEKQRIALDYLLPKQMKEHGLTKGTFQVKEEAILKVIRYYTREAGVRSL 544
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER +A L R A + L S K
Sbjct: 545 ERQMATLCRKGA---------KMLVSGK-------------------------------- 563
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
+VV + +E +LG RF A E+ G + GL +T GG+ +E
Sbjct: 564 --------KKRVVVTQNTIETMLGKKRFRYGLAEEQDQV-GAATGLAYTTAGGDTLSIEV 614
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ + GKG+L LTG+LGDV+KESAQ A +++R+R+ +L + + + DIHIH P G
Sbjct: 615 SVVPGKGKLILTGKLGDVMKESAQAAFSYIRSRSKELDI----DPSFHEKNDIHIHVPEG 670
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAG+T+ TAL+S + + V+ + MTGE+TLRG VLP+GG+K+K ++AHR G+
Sbjct: 671 ATPKDGPSAGITMATALISALTGRVVKKEVGMTGEITLRGRVLPIGGLKEKSMSAHRAGL 730
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+I+P+ N KDL ++P +V L IL ++ VL+ A
Sbjct: 731 TTIIIPKENEKDLEDIPKSVREDLNYILVDHLDQVLKHAL 770
>gi|148657914|ref|YP_001278119.1| ATP-dependent protease La [Roseiflexus sp. RS-1]
gi|148570024|gb|ABQ92169.1| ATP-dependent protease La [Roseiflexus sp. RS-1]
Length = 783
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 342/778 (43%), Positives = 464/778 (59%), Gaps = 82/778 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR---ISSLEMTKIE 105
GV AR L V P G T ++LEG+ R VQ L +Y R IS E IE
Sbjct: 76 GVIAR---LEEFVRLPDG--TARIILEGISRALVQTLLQSEPFYRVRCHAISDPEPKGIE 130
Query: 106 MEQV-----EQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
+E + +Q +F+ + A+ + +++ P H LADI
Sbjct: 131 IEALMDSVKQQIDEFVDHLGEVPQDAVAFVHRIDR---------------PGH-LADIVT 174
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ FEE+L +L+ +D RL +A L+ R L+ +++ +KI Q + L +SQ+E+ L
Sbjct: 175 WAPAFEFEERLDILNELDPVERLRRAHRLLARQLELLKLRQKIQQDTKEVLDQSQREYFL 234
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
R+QMR I+ ELG++DD +D + L+RK+ P + + EL+RL + P
Sbjct: 235 REQMRVIRRELGEDDDIDDPIDELKRKIAQLDAPDYVKEQAMHELKRLAQQGMNSPEAGV 294
Query: 281 SRVYLELIADLPWEKASEEI-DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD-A 338
R YL+ I +LPW A EE+ ++ L A++ LD DHYGL +VK+RI+EYLAVRKL +
Sbjct: 295 IRTYLDWILNLPW--AEEELPEISLHEAQKVLDEDHYGLEKVKERILEYLAVRKLAGNRM 352
Query: 339 RGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLI 398
R P+LCFVGPPGVGKTSL SIA ALGRKF+R SLGG++DEA+IRGHRRTYIG++PGR+I
Sbjct: 353 RSPILCFVGPPGVGKTSLGRSIARALGRKFVRTSLGGIRDEAEIRGHRRTYIGALPGRII 412
Query: 399 DGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVI 458
G+K PV +LDEIDK G D RGDP SALLEVLDPEQN F+DHYL +PFDLS+V+
Sbjct: 413 QGMKTAKSRYPVYVLDEIDKVGQDFRGDPTSALLEVLDPEQNNAFSDHYLEIPFDLSQVV 472
Query: 459 FVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEA 518
F+ATAN+ IP PL DRME+IE+ GYT +EKL IA L+ + + HGL + L I +
Sbjct: 473 FIATANQLDTIPSPLRDRMEIIEIGGYTEDEKLGIAQGFLVRKQREFHGLTPDQLIITDD 532
Query: 519 MVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRL 578
+ +++ YTREAGVRNLER +A+L R A KVA
Sbjct: 533 AIIKLVREYTREAGVRNLEREIASLCRKTARKVAAA------------------------ 568
Query: 579 ADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGI 638
+DG +E P+V+D + LGP R+ A E+ G+
Sbjct: 569 SDGEPIEF--------------------PIVIDAPDIPNYLGPERYTFGLAEEKDEV-GV 607
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
+ G+ W+ GG+V +E +RGKG L LTGQLG+V+KESAQ A+++ R RA +
Sbjct: 608 ATGVTWSPTGGDVLSIEVLPVRGKGGLQLTGQLGEVMKESAQAAMSYARFRAEQFGI--- 664
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ +IHIH P GAVPKDGPSAG+TL TAL+S + K VR D AMTGE+TLRG V
Sbjct: 665 -DPSYFDEHNIHIHVPEGAVPKDGPSAGITLTTALISAMTGKPVRRDVAMTGEITLRGKV 723
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K LAAHR GI+ ILP+ N KD+ E+P V L++I M++VL+ A
Sbjct: 724 LPIGGLKEKTLAAHRAGIRTFILPKDNAKDIAELPKKVREELQLIPVSSMDEVLKIAL 781
>gi|149910318|ref|ZP_01898962.1| ATP-dependent protease La [Moritella sp. PE36]
gi|149806678|gb|EDM66645.1| ATP-dependent protease La [Moritella sp. PE36]
Length = 741
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 326/788 (41%), Positives = 468/788 (59%), Gaps = 88/788 (11%)
Query: 41 EVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE 100
+V H+ G A L + ++ P G V V++EG R + LS Y+ A I +
Sbjct: 22 QVDDLHSVGTVANILQM---LKLPDGTVK--VLVEGTQRAKLNSLSDTNDYFQAEIEYII 76
Query: 101 MTKIEMEQ--------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPI 152
+ E+ + Q +I L+++ A + ++ +++ +
Sbjct: 77 SESVSDEEEDVIIRSAIGQFEGYIKLNKKIPAEVLTSVAAIDEAAR-------------- 122
Query: 153 HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLS 212
LAD A + E++ V+L+ ++ RL ++ + + V +KI +V+ Q+
Sbjct: 123 --LADTMAAHMPLKLEDKQVVLELSNVTERLEFLMAQMESEIDLLHVEKKIRTRVKKQME 180
Query: 213 KSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQ 272
KSQ+E+ L +QM+AI++ELG+++D D+ L K++ A MP+ EL +LK M
Sbjct: 181 KSQREYYLNEQMKAIQKELGESEDGVDEFEQLAEKIEQAHMPAEPKNKTIAELNKLKMMS 240
Query: 273 PQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVR 332
P T R Y++ + +PW+K S+ + D+ A E LD+DHYGL +VK+RI+EYLAV+
Sbjct: 241 PMSAEATVVRSYIDWMISVPWKKRSK-VKKDIAKALEVLDADHYGLDKVKERILEYLAVQ 299
Query: 333 KLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGS 392
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGS
Sbjct: 300 SRVNKLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGS 359
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
MPG++I + +V V NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TFNDHYL V +
Sbjct: 360 MPGKIIQKMAKVEVRNPLFLLDEIDKMASDMRGDPASALLEVLDPEQNTTFNDHYLEVDY 419
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA RHL+ + ++++GL +
Sbjct: 420 DLSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKRHLLDKQIERNGLKQKE 478
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSP 572
+ I + + +I+ YTREAGVR+LER ++ L R A ++
Sbjct: 479 ISIDHSAIMGIIRYYTREAGVRSLEREISKLCRKAVKQI--------------------- 517
Query: 573 LLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAA 630
LL+ L + +++ L + LG FD E
Sbjct: 518 LLNKSL---------------------------KSVTINQDNLSEYLGVQVFDFGKAEGE 550
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARA 690
RV G GL WT GGE+ +E T++ GKG+L+ TG LG+V++ES Q A+T VR+RA
Sbjct: 551 SRV---GQVTGLAWTEVGGELLTIETTSVPGKGKLNYTGSLGEVMQESIQAAMTVVRSRA 607
Query: 691 TDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTG 750
L++ + + RDIH+H P GA PKDGPSAG+ + TALVS + VRA+ AMTG
Sbjct: 608 DKLRING----DFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVRANVAMTG 663
Query: 751 EMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMED 810
E+TLRG VLP+GG+K+K+LAAHR GIK V++P+ N +DL E+PA V+ LEI + +E+
Sbjct: 664 EITLRGEVLPIGGLKEKLLAAHRGGIKCVLIPKDNERDLEEIPANVIGDLEIHPVRWIEE 723
Query: 811 VLEQAFEG 818
VLE A E
Sbjct: 724 VLELALEN 731
>gi|70731344|ref|YP_261085.1| endopeptidase La [Pseudomonas protegens Pf-5]
gi|7644385|gb|AAF65564.1|AF250140_1 protease Lon [Pseudomonas fluorescens]
gi|68345643|gb|AAY93249.1| endopeptidase La [Pseudomonas protegens Pf-5]
Length = 798
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 333/774 (43%), Positives = 463/774 (59%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +V+ S + A +S ++
Sbjct: 68 GTIATVLQL---LKLPDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID-------- 114
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPI---HKLADIFVASF 163
+ A R+ + L+S EQ + G + +VL I +L D A
Sbjct: 115 -----EVDAPDRESEVFVRSLLSQFEQYVQLGKKVPAEVLSSLNSIDEPSRLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L++++ +AG+P + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDAMTKAQAELNKLKQMSPMSAEATVVRS 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
Y++ + +PW KA ++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVL
Sbjct: 290 YIDWLVQVPW-KAQSKVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+
Sbjct: 409 VGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTS 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +
Sbjct: 469 N-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGELEFEPDAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR LER +A + R A
Sbjct: 528 IRYYTREAGVRGLERQIAKVCRKA------------------------------------ 551
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
+ E E + ++TS L LE LG +F AE+ G GL
Sbjct: 552 -------VKEHAMEKRFSVKVTSDL------LEHFLGVRKF-RYGLAEQQDQIGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG+L TG LGDV+ ES ALT VR+RA L + ++
Sbjct: 598 WTQVGGELLTIEAAVVPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ RD HIH P GA PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKRDTHIHMPEGATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|420345498|ref|ZP_14846930.1| ATP-dependent protease La [Shigella boydii 965-58]
gi|391276382|gb|EIQ35154.1| ATP-dependent protease La [Shigella boydii 965-58]
Length = 784
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEAAVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|359783254|ref|ZP_09286470.1| ATP-dependent protease La [Pseudomonas psychrotolerans L19]
gi|359368905|gb|EHK69480.1| ATP-dependent protease La [Pseudomonas psychrotolerans L19]
Length = 798
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 336/774 (43%), Positives = 467/774 (60%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R ++ Y A ++ +E
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGRIESFVENQAYARALVTLIE-------- 114
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASF 163
D A R+ + + L+S EQ + G + +VL I +L D A
Sbjct: 115 -----DSEAPDRESEVFSRSLMSQFEQYVQLGKKVPAEVLSSLNSIEDPSRLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ +L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 ALKIEQKQEILEITELGARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD D+ +++ L+R++++AG+P + EL +LK+M P T R
Sbjct: 230 MKAIQKELGDIDEGHNEVDDLKRRIEAAGLPKDALAKANAELNKLKQMSPMSAEATVVRS 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
Y++ + ++PW+ A ++ LDL A+E LD DHYGL VK+RI+EYLAV+K RGPVL
Sbjct: 290 YIDWLVNVPWQ-AESKVRLDLGRAEEVLDKDHYGLEEVKERILEYLAVQKRVKKVRGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIA + GRKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIARSTGRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK G+D+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FV TA
Sbjct: 409 VGVRNPLFLLDEIDKMGNDMRGDPASALLEVLDPEQNHTFNDHYLEVDYDLSDVMFVCTA 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IP PLLDRMEVI LPGYT +EK+ IA R+LIP+ + +GL ++ EA ++ +
Sbjct: 469 N-SMNIPAPLLDRMEVIRLPGYTEDEKVNIATRYLIPKQVKANGLKKGEVEFDEAALRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR+LER +A + R KV +Q AL +
Sbjct: 528 IRYYTREAGVRSLERQVAKVCR----KVVKQ---HALSKER------------------- 561
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
T+ + VD LE LG +F AE+ G GL
Sbjct: 562 ---------------------TASVTVD--TLEHWLGVRKF-RYGLAEQQDQIGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +E+ + GKG++ TG LGDV+ ES ALT VR+R L + +
Sbjct: 598 WTQVGGELLTIESAVVPGKGQMIKTGSLGDVMAESITAALTVVRSRGRSLGI----PRDF 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ DIHIH P GA PKDGPSAG+ + TALVS +R VRAD AMTGE+TLRG VL +GG
Sbjct: 654 HEKHDIHIHVPEGATPKDGPSAGIGMCTALVSAATRIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GI+ VI+PE N++DL ++P + A L+I K +++VLE A +
Sbjct: 714 LKEKLLAAHRGGIRTVIIPEENVRDLRDIPDNIKADLQIKPVKWIDEVLEVALQ 767
>gi|238764858|ref|ZP_04625799.1| ATP-dependent protease La [Yersinia kristensenii ATCC 33638]
gi|238696965|gb|EEP89741.1| ATP-dependent protease La [Yersinia kristensenii ATCC 33638]
Length = 784
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 460/767 (59%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEME-----QVEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE M E E + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPVMDDREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLASLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDVTERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIMSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R AVK N L D +E+ G++
Sbjct: 544 LEREISKLCRK-AVK-------------------------NLLMDKTVKHIEI--NGDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L+ LG + D A RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P+ N +DL E+P V+A LEI KR++DVL A +
Sbjct: 727 HRGGIKVVLIPDDNKRDLEEIPDNVIADLEIHPVKRIDDVLAIALQN 773
>gi|410627458|ref|ZP_11338197.1| ATP-dependent Lon protease [Glaciecola mesophila KMM 241]
gi|410152950|dbj|GAC24966.1| ATP-dependent Lon protease [Glaciecola mesophila KMM 241]
Length = 788
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 325/764 (42%), Positives = 457/764 (59%), Gaps = 85/764 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQD----------P 113
P G V V++EG R + E + ++ A IS+ E +E+E+ EQ+
Sbjct: 84 PDGTVK--VLVEGNQRAEIAEFVSTDDFFIANISNKE--DLEVEENEQEVIIRSAISQFE 139
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
++ L+++ + +S +EQ + LAD A + E+ +
Sbjct: 140 GYVKLNKKIPPEVLTSLSGIEQAAR----------------LADTMAAHMPLKLAEKQKV 183
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L+ + RL L++ + ++V +KI +V+ Q+ KSQ+E+ L +QM+AI++ELG+
Sbjct: 184 LEMDQVNDRLEYLMALMESEIDLLQVEKKIRTRVKKQMEKSQREYYLNEQMKAIQKELGE 243
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
D+ D+ AL +K+ A MP K EL +LK M P T R Y++ + ++PW
Sbjct: 244 LDEAPDEFEALSKKIDDAKMPEEAKKKATTELSKLKMMSPMSAEATVVRSYIDWLTNVPW 303
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
K S + DL AA + LD++HYGL +VK+RIIEYLAV++ +GP+LC VGPPGVGK
Sbjct: 304 TKRSA-VKKDLAAADKLLDTEHYGLEKVKERIIEYLAVQQRVRKLKGPILCLVGPPGVGK 362
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LL
Sbjct: 363 TSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLL 422
Query: 414 DEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPL 473
DEIDK SD+RGDP+SALLEVLDPEQN TF+DHYL V +DLS V+FVAT+N + IP PL
Sbjct: 423 DEIDKMSSDMRGDPSSALLEVLDPEQNSTFSDHYLEVDYDLSDVMFVATSN-SMDIPGPL 481
Query: 474 LDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGV 533
LDRMEVI L GYT +EKL IA RHL+ + + ++GL S+ L I E+ + +I+ YTREAGV
Sbjct: 482 LDRMEVIRLSGYTEDEKLNIATRHLLDKQISRNGLKSKELVIEESAIIGMIRHYTREAGV 541
Query: 534 RNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGE 593
R+LER ++ + R A + + +++ S+D
Sbjct: 542 RSLEREISKVCRKAVKNILLNKDIKSVTVSQD---------------------------- 573
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
L LG RF D AE G GL WT GGE+
Sbjct: 574 --------------------NLSDYLGVQRF-DYGKAENNNQIGQVTGLAWTQVGGELLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+EAT++ GKG++ TG LGDV++ES Q A+T VR+RA L++ + + + RDIH+H
Sbjct: 613 IEATSVVGKGKMTSTGSLGDVMQESIQTAMTVVRSRAEKLRINS----DFHEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TAL+S + VR D AMTGE+TLRG VL +GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIGMCTALISALTGNPVRCDVAMTGEITLRGEVLAIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GIK VI+P+ N +DL E+P V L I + ++DVLE A +
Sbjct: 729 GGIKTVIIPKENERDLQEIPDNVKQDLSIHPVRWIDDVLELALQ 772
>gi|325292628|ref|YP_004278492.1| ATP-dependent protease La [Agrobacterium sp. H13-3]
gi|418406780|ref|ZP_12980099.1| ATP-dependent protease La [Agrobacterium tumefaciens 5A]
gi|325060481|gb|ADY64172.1| ATP-dependent protease La [Agrobacterium sp. H13-3]
gi|358007273|gb|EHJ99596.1| ATP-dependent protease La [Agrobacterium tumefaciens 5A]
Length = 805
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 329/794 (41%), Positives = 457/794 (57%), Gaps = 85/794 (10%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q+ ASD E IH G A L L ++ P G V V++EG R ++ + R
Sbjct: 57 QINASDDDPSPEAIH--KVGTVANVLQL---LKLPDGTVK--VLVEGKGRAQIEAYTDRE 109
Query: 90 TYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLET 149
+Y A + L+ E E + ALSR ++S E K K+ E
Sbjct: 110 DFYEASATPLQ------EPAEDPVEIEALSRS-------VVSEFESYVKLN--KKISPEV 154
Query: 150 V-------PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEK 202
V KLAD + I E+ ML++V +K RL KA ++ + ++V ++
Sbjct: 155 VGAAGQIDDYSKLADTVASHLSIKITEKQEMLETVSVKQRLEKALGFMEGEISVLQVEKR 214
Query: 203 ITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQ 262
I +V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D++ LE ++ + +
Sbjct: 215 IRSRVKRQMEKTQREYYLNEQMKAIQKELGDGEDGRDEMAELEERIAKTKLSKEAKDKAE 274
Query: 263 KELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVK 322
E+++L++M P T R YL+ + LPW K S+ + +DL +A+ LD DH+GL +VK
Sbjct: 275 AEMKKLRQMSPMSAEATVVRNYLDWLLSLPWGKKSK-VKVDLNSAEAVLDQDHFGLDKVK 333
Query: 323 QRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADI 382
+RI+EYLAV+ RGP+LC VGPPGVGKTSLA SIA A GR+++R++LGGV+DEA+I
Sbjct: 334 ERIVEYLAVQARASKIRGPILCLVGPPGVGKTSLAKSIAKATGREYVRMALGGVRDEAEI 393
Query: 383 RGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKT 442
RGHRRTYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN T
Sbjct: 394 RGHRRTYIGSMPGKIVQSMKKAKKSNPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNST 453
Query: 443 FNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRV 502
F DHYL V +DLS V+FV TAN IP PL+DRMEVI + GYT +EK IA RHL+P+
Sbjct: 454 FMDHYLEVEYDLSDVMFVTTANTLN-IPGPLMDRMEVIRIAGYTEDEKREIAKRHLLPKA 512
Query: 503 LDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPS 562
+ +H L E + + + +VIQ+YTREAGVR+ ER L LAR A ++ + +
Sbjct: 513 IKEHALRPEEFSVSDDALMIVIQQYTREAGVRSFERELMKLARKAVTEIIKGK------- 565
Query: 563 SKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP 622
+ +T+ V D LG P
Sbjct: 566 ------------------------------------VKSVEVTAANVPD------YLGVP 583
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
RF E AER G+ GL WT GGE+ +E M GKG + +TG L +V+KES A
Sbjct: 584 RFRHGE-AEREDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLKEVMKESISAA 642
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA D + DIH+H P GA PKDGPSAGV + TA+VS+ + V
Sbjct: 643 ASYVRSRAVDFGIEPPR----FDKSDIHVHVPEGATPKDGPSAGVAMATAIVSIMTGIPV 698
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
D AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL ++P V +EI
Sbjct: 699 SKDVAMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPDNVKNEMEI 758
Query: 803 ILAKRMEDVLEQAF 816
I RM +V++ A
Sbjct: 759 IPVSRMGEVIKHAL 772
>gi|294141766|ref|YP_003557744.1| ATP-dependent protease La [Shewanella violacea DSS12]
gi|293328235|dbj|BAJ02966.1| ATP-dependent protease La [Shewanella violacea DSS12]
Length = 785
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 334/779 (42%), Positives = 469/779 (60%), Gaps = 88/779 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIE 105
G A L L ++ P G V V++EG R +++ S +++ A LE M + E
Sbjct: 72 GTVASILQL---LKLPDGTVK--VLVEGGKRARIEKYSDEESFFVATALYLESESMAEKE 126
Query: 106 ME-----QVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E V Q +I L+++ + +S +++ + LAD
Sbjct: 127 EEVLVRSAVGQFEGYIKLNKKIPPEVLTSLSGIDEAAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ VD+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKLEDKQSVLEMVDVAERLEYLMAMMESEIDLLQVEKRIRSRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ D+ L +K++ A MP + EL +LK M P T
Sbjct: 231 NEQMKAIQKELGDIDESHDEFETLAKKIEEAKMPEEAKEKATAELNKLKMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW + S+ I DL A+E LD DH+GL +VK+RI+EYLAV+ +G
Sbjct: 291 VRSYVDWMISVPWRQRSK-IKRDLAKAQEVLDEDHFGLEKVKERILEYLAVQSRVKQLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 350 PILCLVGPPGVGKTSLGQSIARATGRKYIRVALGGVRDEAEIRGHRRTYIGSMPGKVIQK 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TF+DHYL V +DLS V+FV
Sbjct: 410 MSKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSTFSDHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI L GYT +EKL IA +HL+P+ ++++GL + + + ++ +
Sbjct: 470 ATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKKHLLPKQIERNGLKLKEVTVHDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR+LER L+ + R K V R+ LLD L
Sbjct: 529 IGIIRYYTREAGVRSLERELSKICR------------------KVVKRI---LLDKTLKH 567
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ VD+ L+ LG R D AE G
Sbjct: 568 ---------------------------VDVDQDNLKSFLGVQRC-DYGKAESNNQIGQVT 599
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L G
Sbjct: 600 GLAWTEVGGDLLTIEATSVPGKGKLSYTGSLGDVMQESIQAAMTVVRARAEQL------G 653
Query: 701 MN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+N + RDIH+H P GA PKDGPSAG + TALVS + VRAD AMTGE+TLRG V
Sbjct: 654 INPDFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRADVAMTGEITLRGEV 713
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LP+GG+K+K+LAAHR G K V++P+ N +DL E+PA V+A L+I + +++VL+ A E
Sbjct: 714 LPIGGLKEKLLAAHRGGTKVVLIPKENERDLEEIPANVVADLKIYPVRWIDEVLKLALE 772
>gi|109899439|ref|YP_662694.1| ATP-dependent protease La [Pseudoalteromonas atlantica T6c]
gi|109701720|gb|ABG41640.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Pseudoalteromonas atlantica T6c]
Length = 788
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 325/762 (42%), Positives = 457/762 (59%), Gaps = 81/762 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISS---LEMTKIEME-----QVEQDPDF 115
P G V V++EG R + E + ++ A IS+ LE+ + E E + Q +
Sbjct: 84 PDGTVK--VLVEGNQRAQIAEFVSTDDFFIANISNKDDLEVEENEQEVIIRSAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ L+++ + +S +EQ + LAD A + E+ +L+
Sbjct: 142 VKLNKKIPPEVLTSLSGIEQAAR----------------LADTMAAHMPLKLAEKQKVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+ RL L++ + ++V +KI +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MDQVNDRLEYLMALMESEIDLLQVEKKIRTRVKKQMEKSQREYYLNEQMKAIQKELGELD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
+ D+ AL +K+ A MP K EL +LK M P T R Y++ + ++PW K
Sbjct: 246 EAPDEFEALSKKIDDAKMPEEAKKKATTELSKLKMMSPMSAEATVVRSYIDWLTNVPWTK 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S + DL AA + LD++HYGL +VK+RIIEYLAV++ +GP+LC VGPPGVGKTS
Sbjct: 306 RSA-VKKDLAAADKLLDTEHYGLEKVKERIIEYLAVQQRVRKLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDP+SALLEVLDPEQN TF+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPSSALLEVLDPEQNSTFSDHYLEVDYDLSDVMFVATSN-SMDIPGPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+ + + ++GL S+ L I E+ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIATRHLLEKQISRNGLKSKELVIEESAIIGMIRHYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ + R A + + +++ S+D
Sbjct: 544 LEREISKVCRKAVKNILLNKDIKSVTVSQD------------------------------ 573
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
L + LG RF D AE G GL WT GGE+ +E
Sbjct: 574 ------------------NLSEYLGVQRF-DYGKAENNNQIGQVTGLAWTQVGGELLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
AT++ GKG++ TG LGDV++ES Q A+T VR+RA L++ + + + RDIH+H P
Sbjct: 615 ATSVVGKGKMTSTGSLGDVMQESIQTAMTVVRSRAEKLRINS----DFHEKRDIHVHVPE 670
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAG+ + TAL+S + VR D AMTGE+TLRG VL +GG+K+K+LAAHR G
Sbjct: 671 GATPKDGPSAGIGMCTALISALTGNPVRCDVAMTGEITLRGEVLAIGGLKEKLLAAHRGG 730
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
IK VI+P+ N +DL E+P V L I + ++DVLE A +
Sbjct: 731 IKTVIIPKENERDLQEIPDNVKQDLSIHPVRWIDDVLELALQ 772
>gi|188581625|ref|YP_001925070.1| ATP-dependent protease La [Methylobacterium populi BJ001]
gi|179345123|gb|ACB80535.1| ATP-dependent protease La [Methylobacterium populi BJ001]
Length = 807
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 326/797 (40%), Positives = 468/797 (58%), Gaps = 89/797 (11%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ ASD + I+ G A L L ++ P G V V++EG R ++
Sbjct: 61 TQINASDDDPATDAIY--TIGTLASVLQL---LKLPDGTVK--VLVEGAGRAQIESFVRS 113
Query: 89 GTYYTARISSLE---MTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRT 143
YY AR +L+ ++E E + + +F + K + E++S + Q +
Sbjct: 114 DEYYEARALTLDDDLGDRVEAEALARSVISEFENYVKLNKKISPEVVSAVTQIDEPS--- 170
Query: 144 KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
KLAD + + ++ +L+ + RL + L++ + ++V ++I
Sbjct: 171 ----------KLADTVGSHLAVKIADKQAILEIPTVAQRLERVLSLMESEISVLQVEKRI 220
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
+V+ Q+ K+Q+E+ L +QM+AI++ELGD++D D+L LE K++ + +
Sbjct: 221 RTRVKRQMEKTQREYYLNEQMKAIQKELGDSEDGRDELAELEEKIEKTKLTKEAREKATA 280
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL++L++M P T R YL+ + +PW K S+ I DL A++ LDSDH+GL +VK
Sbjct: 281 ELKKLRQMSPMSAEATVVRNYLDWMLGIPWGKRSK-IKKDLLGAQQILDSDHFGLDKVKD 339
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
RI+EYLAV++ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IR
Sbjct: 340 RIVEYLAVQQRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIR 399
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIGSMPG+++ +++ NP++LLDEIDK G D RGDP++ALLEVLDPEQN TF
Sbjct: 400 GHRRTYIGSMPGKIVQSMRKAKTSNPLILLDEIDKMGMDFRGDPSAALLEVLDPEQNATF 459
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
NDHYL V +DLS V+FV TAN IP PL+DRMEVI + GYT EEKL IA RHLIP +
Sbjct: 460 NDHYLEVDYDLSNVMFVTTANTLN-IPGPLMDRMEVIRIAGYTEEEKLEIARRHLIPEAV 518
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA--VKVAEQEQEQALP 561
+HGL ++ I + + ++I+RYTREAGVRNLER ++ L R A + + + +Q +A P
Sbjct: 519 KKHGLSADEWSITDDGLMMLIRRYTREAGVRNLEREISNLIRKAVKEILITKVKQVEANP 578
Query: 562 SSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGP 621
+ L + LGP
Sbjct: 579 ET---------------------------------------------------LPEFLGP 587
Query: 622 P--RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESA 679
P R+ + +A ++V G+ GL WT GGE+ +E M GKG++ +TG L DV+KES
Sbjct: 588 PKFRYGEIDADDQV---GVVTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESI 644
Query: 680 QIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSR 739
A ++VR+RA D + L + RDIH+H P GA PKDGPSAG+ + TA++S +
Sbjct: 645 SAAASYVRSRAIDFGIEPP----LFERRDIHVHVPEGATPKDGPSAGIAMATAIISTLTG 700
Query: 740 KRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLAS 799
VR D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KD+ EVP +V
Sbjct: 701 IPVRRDVAMTGEVTLRGRVLPIGGLKEKLLAALRGGIKTVLIPEENAKDIAEVPDSVKNG 760
Query: 800 LEIILAKRMEDVLEQAF 816
LEI+ RM+ VL+ A
Sbjct: 761 LEIVPVSRMDQVLQHAL 777
>gi|300715593|ref|YP_003740396.1| ATP-dependent protease La [Erwinia billingiae Eb661]
gi|299061429|emb|CAX58541.1| ATP-dependent protease La [Erwinia billingiae Eb661]
Length = 784
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 325/765 (42%), Positives = 458/765 (59%), Gaps = 89/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + L+ G ++TA+ L +I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRAHITTLADNGDHFTAQAEYLASPEIDEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ +E + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIEDAAR----------------LADTVAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEARDKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD+DH+GL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLVKAQETLDTDHFGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+ + ++++ L + + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLSKQIERNALKDSEITVDDSAIVSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A + + L+D
Sbjct: 544 LERELSKLCRKA---------------------VKTLLMD-------------------- 562
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++++ L+ LG R+D A RV G GL WT GG++
Sbjct: 563 -------KTIKHILINADNLKDYLGVQRYDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRA+ AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRANVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
HR GIK V++P+ N +DL E+P V+A L+I KR+E+VL A
Sbjct: 727 HRGGIKTVLIPDENKRDLEEIPDNVIADLDIHPVKRIEEVLTLAL 771
>gi|307719319|ref|YP_003874851.1| hypothetical protein STHERM_c16380 [Spirochaeta thermophila DSM
6192]
gi|306533044|gb|ADN02578.1| hypothetical protein STHERM_c16380 [Spirochaeta thermophila DSM
6192]
Length = 790
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 334/776 (43%), Positives = 461/776 (59%), Gaps = 71/776 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+ G AR L R + P G + V L RF V++ A + E T
Sbjct: 74 YTVGTVARIL---RKINLPDGGLNIFV--STLKRFVVRKFLQEAPPIIAAVEYPEETG-- 126
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIH---KLADIFVAS 162
EQ + AL+R A E+ VLE ++ L V I ++AD A
Sbjct: 127 ----EQTDEVKALTR---ALLGEMKQVLENNPLIS--EEIRLNMVNIDQPGRIADFITAV 177
Query: 163 FEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQ 222
I EEQ +L+ D++ R+ K V R + +++ +KI +++ ++ KSQ+EF LR+
Sbjct: 178 LNIKREEQQEILEIFDIRARMEKVLIYVKREQELLKIQQKIQKQINEKIEKSQREFFLRE 237
Query: 223 QMRAIKEELG-DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS 281
Q++AIK+ELG D + + KM+ +P + + V++EL + M+PQ P +T S
Sbjct: 238 QLKAIKKELGMPVDAKSAEYQKFKEKMEKLPLPDEVREVVEQELEKFSLMEPQSPEFTVS 297
Query: 282 RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGP 341
R YLE I LPWE E+ +D+K AK LD DHYGL VK+RI+E+LAVRKLK + +G
Sbjct: 298 RNYLETILSLPWEDPPPEV-VDIKKAKRILDQDHYGLEDVKERILEFLAVRKLKQETKGS 356
Query: 342 VLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGL 401
++C VGPPGVGKTS+ SIA ALGRKF R S+GG++DEA+I+GHRRTYIG+MPG++I GL
Sbjct: 357 IICLVGPPGVGKTSIGKSIARALGRKFFRFSVGGMRDEAEIKGHRRTYIGAMPGKIIQGL 416
Query: 402 KRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVA 461
K V NPV ++DEIDK G +GDPASALLEVLDPEQN F DHYL+VPFD+SKV+F+A
Sbjct: 417 KIVKTKNPVFMIDEIDKLGVSFQGDPASALLEVLDPEQNVAFRDHYLDVPFDISKVLFIA 476
Query: 462 TANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVK 521
TAN IP PLLDRMEVI L GY EEK+ IA R+LIPR L++HGL + ++ ++
Sbjct: 477 TANTLDTIPRPLLDRMEVIRLSGYIEEEKIAIARRYLIPRSLEEHGLAKDAVKYTTPGLR 536
Query: 522 LVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADG 581
+I+ Y REAGVRNLE+ + + R A K+ +E Q
Sbjct: 537 AIIRGYAREAGVRNLEKAIDKIHRRVAKKLVMEELSQ----------------------- 573
Query: 582 AEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVG 641
E +P+ + V E L+K L P E +R+ PG+++G
Sbjct: 574 -----EELPVTITPENV-------------ETYLDKPLYP-----EEETKRIKKPGMALG 610
Query: 642 LVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGM 701
L WT FGGEV +EA A G+ L LTGQLGDV+KESA IA T+VR+ A L E
Sbjct: 611 LAWTPFGGEVLIIEAVATPGREGLSLTGQLGDVMKESATIAYTYVRSIAPRYGLPLE--- 667
Query: 702 NLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPV 761
+ IH+H PAGA PKDGPSAG+T+ +AL+SL + ++VR AMTGE++L G VLP+
Sbjct: 668 -FFERHHIHLHVPAGATPKDGPSAGITMASALLSLVAERKVRPQLAMTGELSLTGSVLPI 726
Query: 762 GGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GG+K+K++AA R +K +I+P+ N KDL E+P V + + + ME+V++ FE
Sbjct: 727 GGLKEKVIAAKRARVKEIIIPKSNEKDLEEIPEYVRKGITFHMVESMEEVIDLLFE 782
>gi|163756086|ref|ZP_02163202.1| ATP-dependent protease La [Kordia algicida OT-1]
gi|161323960|gb|EDP95293.1| ATP-dependent protease La [Kordia algicida OT-1]
Length = 820
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 311/769 (40%), Positives = 456/769 (59%), Gaps = 68/769 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G AR L R ++ P G T ++++G RF V L Y A + + T+ ++
Sbjct: 105 GTVARIL---RVLQMPDGNTT--IIIQGKKRFEVDTLLRDTPYMEATVKEVPETRPDI-- 157
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FEISF 167
+D +F A+ K A+++I ++ ++ + F++S +
Sbjct: 158 --RDDEFQAILESIKDLALQII---KESPNIPSEASFAIKNIESSSFLINFISSNMNLPV 212
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
+E+ +L DLK R + ++ +Q + + I KV L + Q+E+ L+QQM+ I
Sbjct: 213 KEKQELLAITDLKQRALATLKFMNLEMQQLELKNDIQSKVRHDLDQQQREYFLQQQMKTI 272
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
+EELG E D+ A+ + + + KH KEL ++++M PQ Y+ R YLEL
Sbjct: 273 QEELGGGVSYEQDIEAMRTRAKDKKWDEKVKKHFDKELSKMQRMNPQVAEYSIQRNYLEL 332
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
DLPW + S++ +LK A+ LD DH GL VK+RIIEYLAV KL+ D + P+LC G
Sbjct: 333 FLDLPWNEFSKD-KFNLKKAQTILDRDHSGLEDVKKRIIEYLAVLKLRNDMKSPILCLYG 391
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL SIA ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR+I LK+ G
Sbjct: 392 PPGVGKTSLGKSIAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKAGTS 451
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDEIDK S GDP+SA+LEVLDPEQN F D++L + +DLSKV+F+ATAN
Sbjct: 452 NPVFVLDEIDKLSSSHNGDPSSAMLEVLDPEQNTEFYDNFLEMGYDLSKVMFIATANSLS 511
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
I P L DRME+I + GYT EEK+ IA +HL+ + L++HGL + L+I + ++ +++ Y
Sbjct: 512 TIQPALRDRMEIINVTGYTTEEKVEIAGKHLLGKQLEEHGLTDKDLKIGKKQLEKIVEGY 571
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TRE+GVR LE+ +A + R AA +A +E+ +
Sbjct: 572 TRESGVRGLEKQIAKMVRYAAKSIAMEEKYE----------------------------- 602
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
+V+N A++E VLGP R +R E G+ GL WT+
Sbjct: 603 --------KKVTN------------AIIEDVLGPARM-ERNKYENNDVAGVVTGLAWTSV 641
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGR 707
GG++ F+E+T +GKG L +TG LG V+KESA IA+ ++++ A L + E +
Sbjct: 642 GGDILFIESTLSKGKGNLSITGNLGKVMKESATIAMEYMKSNADFLGVEPE----IFSKY 697
Query: 708 DIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDK 767
++HIH P GA PKDGPSAG+T++T+LVSLF++KRV+ D AMTGE+TLRG VLPVGG+K+K
Sbjct: 698 NVHIHVPEGATPKDGPSAGITMLTSLVSLFTQKRVKKDIAMTGEITLRGKVLPVGGIKEK 757
Query: 768 ILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
ILAA R GIK +IL +N +D++E+ + L L M +V++ A
Sbjct: 758 ILAAKRAGIKEIILCAQNKRDILEIKQSYLKGLTFHYVTEMSEVIKHAI 806
>gi|238759260|ref|ZP_04620427.1| ATP-dependent protease La [Yersinia aldovae ATCC 35236]
gi|238702547|gb|EEP95097.1| ATP-dependent protease La [Yersinia aldovae ATCC 35236]
Length = 784
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 459/767 (59%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEME-----QVEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE M E E + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLEAPVMDDREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLASLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DTPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQEVLDIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIMSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R AVK N L D +E+ G++
Sbjct: 544 LEREISKLCRK-AVK-------------------------NLLMDKTVKHIEI--NGDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L+ LG + D A RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P+ N +DL E+P V+A LEI KR++DVL A +
Sbjct: 727 HRGGIKVVLIPDDNKRDLEEIPDNVIADLEIHPVKRIDDVLAIALQN 773
>gi|1170812|sp|P46067.1|LON_ERWAM RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|535161|emb|CAA54779.1| Lon protease [Erwinia amylovora]
Length = 784
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 324/759 (42%), Positives = 460/759 (60%), Gaps = 74/759 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T V++EGL R + LS G ++TA+ L T E+E+ EQ+ QF+
Sbjct: 87 TVKVLVEGLQRARISALSDNGDHFTAKAEYL--TSPEIEEREQEVLVRTAINQFEG---- 140
Query: 129 LISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKAT 187
++ +K L ++ +LAD A + ++ +L+ D+ RL
Sbjct: 141 ---YIKLNKKIPPEVLTSLNSIDDAARLADTVAAHMPLKLSDKQSVLEMSDVDERLEYLM 197
Query: 188 ELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERK 247
+++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ DD D+ AL+RK
Sbjct: 198 AMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRK 257
Query: 248 MQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAA 307
+ +A MP + + EL++LK M P T R Y++ + +PW A +++ DL+
Sbjct: 258 IDAARMPKEAREKTEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-NARSKVEKDLQKR 316
Query: 308 KERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRK 367
++ LD+DH+GL RVK RI+EYLAV+ +GP+LC VGPPGVGKTSL SIA A GRK
Sbjct: 317 RQTLDTDHFGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTSLGQSIAKATGRK 376
Query: 368 FIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDP 427
++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDEIDK SD+RGDP
Sbjct: 377 YVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDP 436
Query: 428 ASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTP 487
ASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLDRMEVI L GYT
Sbjct: 437 ASALLEVLDPEQNIAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLDRMEVIRLSGYTE 495
Query: 488 EEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAA 547
+EKL IA +HL+ + ++++ L L + ++ + +I+ YTRE GVR+LER L+ L R A
Sbjct: 496 DEKLNIAKKHLLSKQIERNALKEHELIVDDSAIVGIIRYYTRERGVRSLERELSKLCRKA 555
Query: 548 AVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSP 607
++ + M +S +
Sbjct: 556 --------------------------------------VKTLLMDKSVKHIE-------- 569
Query: 608 LVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGEL 665
++ L+ LG R+D ++ RV G GL WT GG++ +E + GKG+L
Sbjct: 570 --INADNLKDYLGVQRYDYGRADSENRV---GQVTGLAWTEVGGDLLTIETACVPGKGKL 624
Query: 666 HLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHFPAGAVPKDGP 723
TG LG+V++ES Q ALT VRARA L G+N + RDIH+H P GA PKDGP
Sbjct: 625 TYTGSLGEVMQESIQAALTVVRARAEKL------GINGDFYEKRDIHVHVPEGATPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR GIK V++P+
Sbjct: 679 SAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPD 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
N +DL E+P V+A L+I KR+E+VL A + P+
Sbjct: 739 ENKRDLEEIPENVIADLDIHPVKRIEEVLALALQ-NAPY 776
>gi|393769363|ref|ZP_10357887.1| ATP-dependent protease La [Methylobacterium sp. GXF4]
gi|392725262|gb|EIZ82603.1| ATP-dependent protease La [Methylobacterium sp. GXF4]
Length = 808
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 329/794 (41%), Positives = 467/794 (58%), Gaps = 85/794 (10%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q+ A D + I+ G A L L ++ P G V V++EG+ R V +
Sbjct: 62 QINAGDDDPATDAIY--KIGTLASVLQL---LKLPDGTVK--VLVEGIGRAKVTGFTRSD 114
Query: 90 TYYTARISSLE---MTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
YY A +L ++E E + + +F + K + E++S + Q +
Sbjct: 115 EYYEATAEALHDELGDRVEAEALARSVLSEFENYVKLNKKISPEVVSAVTQIDEPS---- 170
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
KLAD + + ++ +L++ + RL + L++ + ++V ++I
Sbjct: 171 ---------KLADTIGSHLLVKISDKQGILETPTVAQRLERVLSLMESEISVLQVEKRIR 221
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELGD++D D+L LE K++ E
Sbjct: 222 TRVKRQMEKTQREYYLNEQMKAIQKELGDSEDGRDELAELEEKIEKTKFTKEARDKATAE 281
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L++L++M P T R YL+ + +PW K S+ I DL A+ LD+DH+GL +VK+R
Sbjct: 282 LKKLRQMSPMSAEATVVRNYLDWMLGIPWGKRSK-IKKDLLGAQVLLDNDHFGLDKVKER 340
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV++ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRG
Sbjct: 341 IVEYLAVQQRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRG 400
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG+++ +++ NP++LLDEIDK G D RGDP++ALLEVLDPEQN TFN
Sbjct: 401 HRRTYIGSMPGKIVQSMRKAKTSNPLILLDEIDKMGMDFRGDPSAALLEVLDPEQNSTFN 460
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+FV TAN IP PL+DRMEVI + GYT EEK+ IA +HLIP L
Sbjct: 461 DHYLEVDYDLSNVMFVTTANTLN-IPGPLMDRMEVIRIAGYTEEEKVEIARKHLIPNALK 519
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+HGLG+ I + + ++++RYTREAGVRNLER L+ L R A +E + +K
Sbjct: 520 KHGLGTHEWSIDDDGLMMLVRRYTREAGVRNLERELSNLIRKAV-------KEILITKTK 572
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP-- 622
V V +E +P+ LGPP
Sbjct: 573 SVA----------------VNVETLPV--------------------------FLGPPKF 590
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
R+ + +A ++V G+ GL WT GGE+ +E M GKG++ +TG L DV+KES A
Sbjct: 591 RYGEIDADDQV---GVVTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLKDVMKESISAA 647
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA D + L + RDIH+H P GA PKDGPSAG+ + TA+VS + V
Sbjct: 648 ASYVRSRAIDFGIEPP----LFERRDIHVHVPEGATPKDGPSAGIAMATAIVSTLTGIAV 703
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KD+ EVP +V LEI
Sbjct: 704 RRDIAMTGEVTLRGRVLPIGGLKEKLLAALRGGIKIVLIPEENAKDIAEVPDSVKNGLEI 763
Query: 803 ILAKRMEDVLEQAF 816
I RM+ VLE+A
Sbjct: 764 IPVSRMDQVLEKAL 777
>gi|436840278|ref|YP_007324656.1| class III heat-shock ATP-dependent LonA protease [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432169184|emb|CCO22550.1| class III heat-shock ATP-dependent LonA protease [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 841
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 324/775 (41%), Positives = 468/775 (60%), Gaps = 73/775 (9%)
Query: 39 QQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISS 98
Q E+ H + R L + P GR+ V+++G+ R V+ ++ A I +
Sbjct: 131 QDELYHTGTVCMIMRMLKM------PDGRLK--VLVQGVSRAKVKRFIGSEPFHIAEIET 182
Query: 99 LEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADI 158
+ E E + DP AL R + + +++S+ + + VL +LAD+
Sbjct: 183 IS----ETEATKMDPTQEALIRSSREQSEKILSL--RGISSADIMSVLNNVEEPGRLADL 236
Query: 159 FVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEF 218
++ + +L+ + RL+ + + ++ + KI + + K+QK+F
Sbjct: 237 IASNLRMKVPVAQSILECENPIERLTLVNTQLTQEVEVASMQNKIQSMAKEGMDKAQKDF 296
Query: 219 LLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGY 278
LR+Q++AIK+ELG++ D+ ++ + + ++ A MP + K +K+LRRL+ M P+
Sbjct: 297 YLREQLKAIKKELGESTDEAEEAEEIRKAIKKAKMPKEVLKEAEKQLRRLEAMHPEASEA 356
Query: 279 TSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDA 338
T R YL+ + ++PW+K S + LD+ AK+ LD DHY L +VK+RI+EYL+VRKL P
Sbjct: 357 TVIRTYLDWMVEIPWKKQSRD-RLDIIEAKKILDEDHYDLEKVKERILEYLSVRKLNPSM 415
Query: 339 RGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLI 398
+GP+LCFVGPPGVGKTSL SIA +L RKF R+SLGG++DEA+IRGHRRTYIGSMPGR+I
Sbjct: 416 KGPILCFVGPPGVGKTSLGRSIARSLQRKFHRMSLGGMRDEAEIRGHRRTYIGSMPGRII 475
Query: 399 DGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVI 458
+K+ G NPV++LDEIDK GSD RGDP+SALLEVLDPEQN +F DHYLNVP+DLSKV+
Sbjct: 476 QAIKQCGTRNPVIMLDEIDKLGSDFRGDPSSALLEVLDPEQNNSFTDHYLNVPYDLSKVM 535
Query: 459 FVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEA 518
F+ TAN IP PLLDRME+I +PGYT +K+ IA R+++ R ++GL + + +
Sbjct: 536 FICTANVLDSIPRPLLDRMELIRIPGYTEYDKVNIARRYIVSRQAKENGLKEGDMIMGDD 595
Query: 519 MVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRL 578
++ +I+ YTREAG+RNLER + ++ R A K AE E+
Sbjct: 596 ILSKIIKEYTREAGLRNLEREIGSVCRKLARKKAEGEK---------------------- 633
Query: 579 ADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGI 638
F +T VD L K LG P++ + E + A G+
Sbjct: 634 ---------------------GPFEVT----VDN--LHKYLGIPKYLEEEKENELPA-GV 665
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
++GL WT GG V VE +AM GKG+ LTGQLGDV+KESAQ A+++ R A E
Sbjct: 666 ALGLAWTPVGGTVLHVEISAMPGKGKQLLTGQLGDVMKESAQAAVSFARLHAK------E 719
Query: 699 DGMN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRG 756
G+N + +D+HIH P GA PKDGPSAGVTLVTALVS + V + AMTGE++LRG
Sbjct: 720 YGINPKFHEEQDLHIHVPDGATPKDGPSAGVTLVTALVSALTNIPVDPELAMTGEISLRG 779
Query: 757 LVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
VLPVGG+K+KILAA G+KRV++P +N KDL ++P + +EI +R+++V
Sbjct: 780 RVLPVGGIKEKILAAVSLGMKRVLIPSQNQKDLEDIPDELRKKIEITPIERIDEV 834
>gi|317129825|ref|YP_004096107.1| ATP-dependent protease La [Bacillus cellulosilyticus DSM 2522]
gi|315474773|gb|ADU31376.1| ATP-dependent protease La [Bacillus cellulosilyticus DSM 2522]
Length = 772
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 304/766 (39%), Positives = 459/766 (59%), Gaps = 87/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYT-----------ARISSLEMTKIEMEQVEQD 112
P+G T V++EGL R +V + Y+ A + + + +EQ EQ
Sbjct: 82 PNG--TIRVLVEGLQRGNVLTFEDKEEYFEVEVELLEERQEATVEEQALMRNVLEQFEQ- 138
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I +S++ + +S + + +LADI + + ++
Sbjct: 139 --YIQISKKISQETLATVS----------------DIIEPGRLADIISSHLPLKIVQKQE 180
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L++ LK RL+ +++ + + + +KI Q+V+ + K+QKE+ LR+QM+AI++ELG
Sbjct: 181 VLETFSLKERLTLILQILSNEKEVLGLEKKIGQRVKKSMEKTQKEYYLREQMKAIQKELG 240
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D D E ++ +K+ +A MP ++ + KEL R +KM + R Y+E + +P
Sbjct: 241 DKDGKESEIEEFRKKIAAADMPESVQEKAIKELARYEKMPASSAESSVIRNYVEWLTQVP 300
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W K +E++ LD+ +++ LD DHYGL +VK+R++EYLAV++L + +GP+LC GPPGVG
Sbjct: 301 WSKETEDL-LDIHHSEKILDEDHYGLEKVKERVLEYLAVQQLTRELKGPILCLAGPPGVG 359
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSLA SIA +LGR F+RISLGGV+DEA+IRGHRRTY+G+MPGR+I G+K+ NPV L
Sbjct: 360 KTSLARSIARSLGRNFVRISLGGVRDEAEIRGHRRTYVGAMPGRIIQGMKKAETINPVFL 419
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK SD RGDP++A+LEVLDPEQN +F+DHY+ P+DLSKV+F+ TAN IP P
Sbjct: 420 LDEIDKMASDFRGDPSAAMLEVLDPEQNNSFSDHYIEEPYDLSKVMFIMTANNIGAIPAP 479
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L+DRME+I + GYT EKL IA +L+P+ + +HGL LQ+ E + V++ YTREAG
Sbjct: 480 LMDRMEIINIAGYTEVEKLNIAQEYLLPKQVKEHGLTKGKLQVKEEAILKVVRYYTREAG 539
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VR LER +A + R AA + E+++ + + K +
Sbjct: 540 VRGLERQMATICRKAAKIIVSGEKKKVIVTDKTI-------------------------- 573
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
E +LG P+F AE G + GL +T GG+
Sbjct: 574 -----------------------EDLLGKPKF-RYGKAELEDQIGAATGLAYTTAGGDTL 609
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
+E + GKG+L LTG+LGDV+KESAQ A +++R+++ +L + + + + DIHIH
Sbjct: 610 QIEVSLAPGKGKLTLTGKLGDVMKESAQAAFSYIRSKSEELSIDS----DFHETNDIHIH 665
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
P GAVPKDGPSAG+T+ TAL+S + + VR + MTGE+TLRG VLP+GG+K+K ++AH
Sbjct: 666 VPEGAVPKDGPSAGITIATALISALTGRAVRKEVGMTGEITLRGRVLPIGGLKEKSMSAH 725
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
R GI +I+P+ N KDL ++P +V L I +++VL++A G
Sbjct: 726 RAGITHIIMPKDNEKDLEDIPESVRKDLTFIPVSHLDEVLKEALVG 771
>gi|416287648|ref|ZP_11648934.1| DNA-binding ATP-dependent protease La [Shigella boydii ATCC 9905]
gi|320178279|gb|EFW53253.1| DNA-binding ATP-dependent protease La [Shigella boydii ATCC 9905]
Length = 799
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 99 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 156
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 157 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 201 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 261 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 319
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 320 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 379
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 380 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 439
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 440 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 498
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 499 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 558
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 559 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 590
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 591 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 627
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 628 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 681
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 682 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 741
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I K +E+VL A +
Sbjct: 742 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKCIEEVLTLALQN 788
>gi|298208545|ref|YP_003716724.1| ATP-dependent protease [Croceibacter atlanticus HTCC2559]
gi|83848468|gb|EAP86337.1| ATP-dependent protease [Croceibacter atlanticus HTCC2559]
Length = 816
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 310/770 (40%), Positives = 454/770 (58%), Gaps = 71/770 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
GV AR L R ++ P G T V+++G RF + E+ T Y A I + + E E
Sbjct: 105 GVVARIL---RVLKMPDGNTT--VIIQGKKRFEIDEVITEDPYLQATIKEVPEARPEKEN 159
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FEISF 167
E F A+ K A+++I +Q + + FV+S +S
Sbjct: 160 EE----FSAIVDSIKELALKII---KQSPNIPSEASFAISNIESPSFLINFVSSNMNLSV 212
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
++ +L + DLK R + ++ Q + + I KV+ +S+ Q+E+ L QQM+ I
Sbjct: 213 ADKQKLLATNDLKERALATLKFMNVEQQKLELKNDIQSKVQSDMSQQQREYFLHQQMKTI 272
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
+EELG ED++ ++++ + ++ KH +KE+ +L++M PQ Y+ R YL+L
Sbjct: 273 QEELG-GVSHEDEVEEMKQRAKKKSWGEDVAKHFKKEISKLQRMNPQVSEYSIQRNYLDL 331
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
DLPW + S++ DLK A + LD DHYGL VK+RIIEYLAV KL+ D + P+LC G
Sbjct: 332 FLDLPWNEFSKD-KFDLKRAMKILDRDHYGLEDVKKRIIEYLAVLKLRNDMKSPILCLYG 390
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL S+A ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR+I LK+ G
Sbjct: 391 PPGVGKTSLGKSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKAGTS 450
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDEIDK G+ +GDP+SALLEVLDPEQN F+D++L + FDLSKV+F+AT N
Sbjct: 451 NPVFVLDEIDKIGTGNQGDPSSALLEVLDPEQNNEFHDNFLEMGFDLSKVMFIATCNSLN 510
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
I P L DRME+I + GYT EEK+ I +HL+P+ L++HGL + L+I + ++ +++ Y
Sbjct: 511 TIQPALRDRMEIINVTGYTIEEKVEIGKKHLLPKQLEEHGLTKDHLKIAKPQLEKIVEGY 570
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKD-VHRLGSPLLDNRLADGAEVEM 586
TRE+GVR+LE+ +A + R AA +A +E ++ D V LGSP L
Sbjct: 571 TRESGVRSLEKQIAKMVRYAAKNIAMEEDYSVKITNDDVVEVLGSPKL------------ 618
Query: 587 EVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTN 646
+R+ E G+ GL WT
Sbjct: 619 ---------------------------------------ERDKYENNDVAGVVTGLAWTR 639
Query: 647 FGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQG 706
GG++ F+E+ +GKG L++TG LG V+KESA IA+ +++A A + ++ + +
Sbjct: 640 VGGDILFIESILSKGKGNLNITGNLGKVMKESATIAMEYIKAHAEEFGIIP----TIFEK 695
Query: 707 RDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKD 766
++HIH P GA PKDGPSAG+T++T+LVSLF++++V+ AMTGE+TLRG VLPVGG+K+
Sbjct: 696 YNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQRKVKKSVAMTGEITLRGKVLPVGGIKE 755
Query: 767 KILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
KILAA R IK ++L E N +D+ E+ L L M VL+ A
Sbjct: 756 KILAAKRARIKEIVLCEDNRRDIKEIKEEYLKGLTFHYVTDMSQVLDVAL 805
>gi|423701220|ref|ZP_17675679.1| lon protease [Escherichia coli H730]
gi|385712910|gb|EIG49849.1| lon protease [Escherichia coli H730]
Length = 784
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RM VI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMGVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|347753003|ref|YP_004860568.1| anti-sigma H sporulation factor LonB [Bacillus coagulans 36D1]
gi|347585521|gb|AEP01788.1| anti-sigma H sporulation factor, LonB [Bacillus coagulans 36D1]
Length = 774
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 306/753 (40%), Positives = 459/753 (60%), Gaps = 69/753 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T V++EG+ R + GT+Y+ + + + EQ D + AL R T +E
Sbjct: 85 TIRVLVEGVRRAKIVSFEDEGTFYSVEVETFD------EQFRPDAETEALMR----TMLE 134
Query: 129 LIS-VLEQKQKTGGRT-KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
+ Q +K G T + + + K ADI + + ++ +L+++D+K R+ K
Sbjct: 135 FFDQYISQSKKISGETFQAVSDMEDGGKAADIIASHLPLRLPQKQDILETIDIKERIRKL 194
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
L+ + +++ ++I+Q+V+ + ++QKE+ LR+QM+AI++ELGD + ++ L
Sbjct: 195 IGLIKNEQEILQLEKEISQQVKKSMERTQKEYYLREQMKAIQKELGDKEGKTAEVHELRE 254
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K+ +AGMP ++ KEL R +K+ R YL+ + LPW A+E+ DL++
Sbjct: 255 KILNAGMPEHVANTAFKELDRYEKIPAASSESAVIRNYLDWLITLPWSNATED-DLNVAK 313
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A++ L+ DHYGL +VK+R++EYLAV++L +GP+LC GPPGVGKTSLA SIA +LGR
Sbjct: 314 AEKILNEDHYGLEKVKERVLEYLAVQQLTRSIKGPILCLAGPPGVGKTSLARSIAKSLGR 373
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
KF+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV LLDEIDK SD RGD
Sbjct: 374 KFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGTINPVFLLDEIDKMASDFRGD 433
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
P++A+LEVLDPEQN F+DH++ P+DLSKV+F+ATAN +P PL DRME+I + GYT
Sbjct: 434 PSAAMLEVLDPEQNHAFSDHFIEEPYDLSKVMFIATANDLSGVPGPLRDRMEIISISGYT 493
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EK+ IA HL+P+ + ++GL L++ ++L+++RYTREAGVR LER LA + R
Sbjct: 494 ELEKIEIAKTHLLPKQIKENGLARNQLRMDAEALRLIVRRYTREAGVRGLERRLAEICRK 553
Query: 547 AAVKVAEQEQEQALPSSKD-VHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
A + ++++ S+K+ V LG PL + EME
Sbjct: 554 TAKIIVSGKRKRVTVSAKNIVDFLGKPLFHY-----GQAEME------------------ 590
Query: 606 SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGEL 665
D+ G++ GL +T GG+ +E + GKG+L
Sbjct: 591 -----DQI-----------------------GVATGLAYTTVGGDTLQIEVSLSPGKGKL 622
Query: 666 HLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSA 725
LTG+LGDV+KESAQ A ++VR++A L L + + DIHIH P GAVPKDGPSA
Sbjct: 623 VLTGKLGDVMKESAQTAFSFVRSKAEALGLAP----DFHEKYDIHIHVPEGAVPKDGPSA 678
Query: 726 GVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERN 785
G+T+ TAL+S ++ V + MTGE+TLRG VLP+GG+K+K L AHR G+K++I+P+ N
Sbjct: 679 GITIATALISALTKHAVHKEVGMTGEITLRGRVLPIGGLKEKSLGAHRAGLKKIIIPKEN 738
Query: 786 LKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
+DL ++P +V L M++V+E A G
Sbjct: 739 ERDLDDIPESVRGDLHFYPVTHMDEVIEIAIAG 771
>gi|335041124|ref|ZP_08534240.1| anti-sigma H sporulation factor, LonB [Caldalkalibacillus thermarum
TA2.A1]
gi|334178922|gb|EGL81571.1| anti-sigma H sporulation factor, LonB [Caldalkalibacillus thermarum
TA2.A1]
Length = 739
Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust.
Identities = 305/733 (41%), Positives = 455/733 (62%), Gaps = 85/733 (11%)
Query: 56 HLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSL---EMTKIEMEQ---- 108
H+ + ++ P+G T V++EGL R ++E + + L + ++E E
Sbjct: 78 HVKQMLKLPNG--TIRVLVEGLYRAKIKEFIADEEAFIVKAEQLADWDDNELETEAFMRA 135
Query: 109 -VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISF 167
++Q +I+LS++ + + +++ GR LAD+ + +
Sbjct: 136 VLKQFEQYISLSKKITPETLATVRDIDEP----GR------------LADVIASHLSLKI 179
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
+++ +L++++++ RL K +++ + + + +I Q+V+ + K+QKE+ LR+QM+AI
Sbjct: 180 KDKQDILETINVRDRLEKILTILNNEKEVLELERRIGQRVKKSMEKTQKEYYLREQMKAI 239
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
++ELG+ + ++ L ++++ +P I + V+KEL R +KM P + R Y+E
Sbjct: 240 QKELGEKEGRAGEVEELRKRLEEKNVPDRIKEKVEKELERYEKMPPTSAESSVIRNYIEW 299
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
+ +LPW + +E+ +D+ A++ LD+DHYGL + K+R++EYLAV+KL +GP+LC VG
Sbjct: 300 LLNLPWTEQTED-RIDISEAEKILDADHYGLEKPKERVLEYLAVQKLVNKIKGPILCLVG 358
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSLA SIA ++GRKF+RISLGGV+DEA+IRGHRRTY+G++PGR+I G+K G
Sbjct: 359 PPGVGKTSLARSIAKSMGRKFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGMKTAGTV 418
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV LLDEIDK D RGDPASALLEVLDPEQN TF+DH++ P+DLSKV+F+ TAN
Sbjct: 419 NPVFLLDEIDKMAHDFRGDPASALLEVLDPEQNSTFSDHFIEEPYDLSKVMFITTANTTH 478
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
IP PLLDRME+I +PGYT EK IA+ +L+P+ ++QHGL LQ+ E V VI+RY
Sbjct: 479 TIPRPLLDRMELIYIPGYTEVEKKEIALNYLLPKQMEQHGLKKNQLQVKEEAVYKVIRRY 538
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TREAGVRNLER LAA+ R AA + E+++
Sbjct: 539 TREAGVRNLERQLAAICRKAAKTIVSGEKKR----------------------------- 569
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAERVAAPGISVGLVWT 645
+VV E LE++LG P R+ E ++V G++ GL WT
Sbjct: 570 --------------------VVVTENTLEELLGKPKYRYGLAEVDDQV---GVATGLAWT 606
Query: 646 NFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQ 705
+ GG+ +E T + GKG+L LTG+LGDV+KESAQ A +++R++A L + + +
Sbjct: 607 SVGGDTLSIEVTVVPGKGKLTLTGKLGDVMKESAQAAFSYIRSKAEALGI----DPDFYE 662
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
+DIHIH P GA+PKDGPSAG+T+ TALVS S K V + MTGE+TLRG VLP+GG+K
Sbjct: 663 TKDIHIHVPEGAIPKDGPSAGITMATALVSALSGKPVSKEVGMTGEITLRGRVLPIGGLK 722
Query: 766 DKILAAHRYGIKR 778
+K LAAHR G ++
Sbjct: 723 EKALAAHRAGFEK 735
>gi|289627506|ref|ZP_06460460.1| ATP-dependent protease La [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289649943|ref|ZP_06481286.1| ATP-dependent protease La [Pseudomonas syringae pv. aesculi str.
2250]
gi|422583543|ref|ZP_16658666.1| ATP-dependent protease La [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330868373|gb|EGH03082.1| ATP-dependent protease La [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 798
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 460/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YNVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSTRVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALTKATAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL +Q E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEIQFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKAV-------------------------------- 552
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
H + F + V MLE LG +F AE+ G
Sbjct: 553 -------------KEHAMEKRFSVQ----VTAEMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|71734411|ref|YP_273937.1| ATP-dependent protease La [Pseudomonas syringae pv. phaseolicola
1448A]
gi|416015385|ref|ZP_11562998.1| ATP-dependent protease La [Pseudomonas syringae pv. glycinea str.
B076]
gi|416028210|ref|ZP_11571266.1| ATP-dependent protease La [Pseudomonas syringae pv. glycinea str.
race 4]
gi|422606343|ref|ZP_16678353.1| ATP-dependent protease La [Pseudomonas syringae pv. mori str.
301020]
gi|71554964|gb|AAZ34175.1| ATP-dependent protease La [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298159272|gb|EFI00330.1| ATP-dependent protease La Type I [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320325363|gb|EFW81430.1| ATP-dependent protease La [Pseudomonas syringae pv. glycinea str.
B076]
gi|320327652|gb|EFW83660.1| ATP-dependent protease La [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330889995|gb|EGH22656.1| ATP-dependent protease La [Pseudomonas syringae pv. mori str.
301020]
Length = 798
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 460/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YNVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALTKATAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL +Q E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEIQFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKAV-------------------------------- 552
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
H + F + V MLE LG +F AE+ G
Sbjct: 553 -------------KEHAMEKRFSVQ----VTAEMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|422010031|ref|ZP_16357013.1| DNA-binding ATP-dependent protease La [Providencia rettgeri Dmel1]
gi|414092204|gb|EKT53883.1| DNA-binding ATP-dependent protease La [Providencia rettgeri Dmel1]
Length = 812
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 330/784 (42%), Positives = 459/784 (58%), Gaps = 104/784 (13%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI------------------------SSL 99
P G V V++EGL R + L+ G Y+ A+ SS
Sbjct: 84 PDGTVK--VLVEGLRRARITSLTDNGEYFLAQAEYLATEQNSESEHAPYDETAAGSQSSD 141
Query: 100 EMTKIEMEQ-----VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHK 154
+ + E E V Q +I L+++ + + +EQ Q + K
Sbjct: 142 ALDEKENEVLYRTIVSQFESYIKLNKKIPPEVLTALHAIEQDQ--------------LDK 187
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LAD + + ++ +L+ ++ R+ +++ + ++V ++I +V+ Q+ KS
Sbjct: 188 LADTIASHMPLKLADKQRVLEMANIAERVEFLMAMMESETELLQVEKRIRNRVKKQMEKS 247
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
Q+E+ L +QM+AI++ELG+ DD D+ +L+RK++ A MP + + EL++LK M P
Sbjct: 248 QREYYLNEQMKAIQKELGEMDDAPDEYESLKRKIEEAKMPKEAQEKAEAELQKLKMMSPM 307
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
T R Y++ + +PW K S ++ DL A+E LD+DHYGL RVK RI+EYLAV+
Sbjct: 308 SAEATVVRSYIDWMVQVPWHKRS-KVKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSR 366
Query: 335 KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
+GP+LC VGPPGVGKTSL SIA A GR++ R++LGGV+DEA+IRGHRRTYIGSMP
Sbjct: 367 VSKIKGPILCLVGPPGVGKTSLGQSIAKATGRQYTRMALGGVRDEAEIRGHRRTYIGSMP 426
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
G+LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN FNDHYL V +DL
Sbjct: 427 GKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDL 486
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
S V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA RHL+ + ++++ L L
Sbjct: 487 SDVMFVATSN-SMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLSKQIERNALKKNELT 545
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLL 574
I ++ + +I+ YTREAGVR LER ++ L R A +AL L+
Sbjct: 546 IDDSALMSIIRYYTREAGVRGLEREISKLCRKAV---------KAL------------LM 584
Query: 575 DNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AER 632
D +L + ++ L+ LG RFD +A R
Sbjct: 585 DKKLKH---------------------------IEINADNLKDYLGVRRFDYGQADTENR 617
Query: 633 VAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATD 692
V G GL WT GG++ +E + GKG+L TG LG+V++ES Q ALT VRARA
Sbjct: 618 V---GQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQTALTVVRARAEK 674
Query: 693 LQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEM 752
L + + + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+
Sbjct: 675 LGI----NSDFYEKRDIHVHVPEGATPKDGPSAGIAMSTALVSCLTGNPVRADVAMTGEI 730
Query: 753 TLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
TLRGLV P+GG+K+K+LAAHR GIK V++P+ N +DL E+P V+A LEI K +E+VL
Sbjct: 731 TLRGLVFPIGGLKEKLLAAHRGGIKTVLIPKENERDLEEIPQNVIADLEIHPVKTIEEVL 790
Query: 813 EQAF 816
A
Sbjct: 791 SLAL 794
>gi|422645840|ref|ZP_16708975.1| ATP-dependent protease La [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959389|gb|EGH59649.1| ATP-dependent protease La [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 798
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/777 (42%), Positives = 463/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALTKATAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRTYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIASA RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIASATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL +Q E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEIQFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKA--------------------------------- 551
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ E T E + +T+ MLE LG +F AE+ G
Sbjct: 552 ----------VKEHTMEKRFSVHVTA------EMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|319778291|ref|YP_004129204.1| ATP-dependent protease La :Type I [Taylorella equigenitalis MCE9]
gi|317108315|gb|ADU91061.1| ATP-dependent protease La :Type I [Taylorella equigenitalis MCE9]
gi|399114730|emb|CCG17525.1| ATP-dependent protease La [Taylorella equigenitalis 14/56]
Length = 812
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 325/768 (42%), Positives = 468/768 (60%), Gaps = 62/768 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
GV A L L ++ P G T V++EG+ R + + G+ Y +E T + Q
Sbjct: 73 GVVANILQL---IKLPDG--TIKVLVEGVERIKIDYIEDDGSLYMGEGHIVETTISDESQ 127
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFE 168
V P ++ +F+ E + + ++ Q ++ + +E P+ + +D A ++
Sbjct: 128 V--SPLIRSVGTKFE----EFVKINKRLQPDVVQSILRIED-PV-RFSDTVCAQLHVNQS 179
Query: 169 EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIK 228
++ +L+ +DL RL+ ++ + I + +KI +V+ Q+ KSQ+++ L +Q++AI+
Sbjct: 180 KKQSLLEKIDLIDRLNSLLFFLEYEMDIISLEKKIQDRVKKQMEKSQRDYYLNEQIKAIQ 239
Query: 229 EELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELI 288
+ELG+ ++ D L LE+K++ AGMP + V EL++LK+M P R Y++ +
Sbjct: 240 KELGEGEEGAD-LELLEKKIKEAGMPDETEEKVLGELKKLKQMAPMSAEAAVIRSYIDAV 298
Query: 289 ADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGP 348
+PW+K S+ + L A+E LD+DHYGL +VK+RI+EYLAV+K + P+LC VGP
Sbjct: 299 VSVPWKKKSKA-NTKLSVAQETLDADHYGLEKVKERIVEYLAVQKRGNKLKAPILCLVGP 357
Query: 349 PGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCN 408
PGVGKTSL SIA A RK++R++LGGV DE++IRGHRRTYIG+MPG++I + +VGV N
Sbjct: 358 PGVGKTSLGQSIAKATNRKYVRMALGGVHDESEIRGHRRTYIGAMPGKIIQNMTKVGVKN 417
Query: 409 PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQP 468
P+ LLDEIDK G D RGDP++ALLEVLDPEQN TF DHYL V +DLS V+FVAT+N
Sbjct: 418 PLFLLDEIDKMGQDYRGDPSAALLEVLDPEQNNTFQDHYLEVDYDLSDVLFVATSNTMN- 476
Query: 469 IPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYT 528
IP PLLDRMEVI L GYT +EKL IA HLIP+++ +G+ + L+I + V V++ YT
Sbjct: 477 IPAPLLDRMEVIRLSGYTEDEKLHIAKDHLIPKLMKNNGIKTGELEIDDTAVIDVVRYYT 536
Query: 529 REAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEV 588
REAGVR+LER L + R + E+E+E SSK
Sbjct: 537 REAGVRSLERELGKICRKVVKAIVEKEEE----SSKKT---------------------- 570
Query: 589 IPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFG 648
++ T VVD + L+K LG +F AE+ G GL WT G
Sbjct: 571 --------KIKTT-------VVDSSNLDKYLGVRKF-TFGLAEKENRIGQVTGLAWTEVG 614
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
G++ +E ++GKG++ TG LGDV+KES +A T +R+ A L NL + +D
Sbjct: 615 GDLLSIEVAVVQGKGQIQHTGSLGDVMKESMSVARTVIRSWAYQLGFFD----NLFEKKD 670
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
+HIH P GA PKDGPSAG+ + TALVS +S VRAD AMTGE+TLRG VL +GG+K+K+
Sbjct: 671 MHIHVPDGATPKDGPSAGIAVTTALVSAYSGIPVRADVAMTGEITLRGEVLAIGGLKEKL 730
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LAA R GIK+V++P+ N+KDL E+P V LEII K + +VLE A
Sbjct: 731 LAALRGGIKKVLIPQENVKDLAEIPENVKNGLEIIPVKWINEVLEHAL 778
>gi|301384118|ref|ZP_07232536.1| ATP-dependent protease La [Pseudomonas syringae pv. tomato Max13]
Length = 798
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/777 (42%), Positives = 465/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALAKETAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRTYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL +Q EA +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEVQFDEAAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKA--------------------------------- 551
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ E T E + ++T+ MLE LG +F AE+ G
Sbjct: 552 ----------VKEHTMEKRFSVQVTA------EMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|148655742|ref|YP_001275947.1| ATP-dependent protease La [Roseiflexus sp. RS-1]
gi|148567852|gb|ABQ89997.1| ATP-dependent protease La [Roseiflexus sp. RS-1]
Length = 835
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/687 (44%), Positives = 421/687 (61%), Gaps = 80/687 (11%)
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LAD+ ++ + + +L+++D++ RL + + ++ + L + + +I +V+ ++ +S
Sbjct: 183 LADLIASTLPLDVPRRQEILETLDVEERLRRLSIMLSQELDVLELESRIHTQVQKEVDRS 242
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
Q+EF LR+QM+AI+ ELG D + ++ L ++ +A MP +EL R++ M P
Sbjct: 243 QREFFLREQMKAIQRELGQTDPIQREMDELRERILAAAMPERAQAKALEELERMEMMPPA 302
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
P Y+ R YL+ + +PW + +E+ D DL A L+ +HYGL RVK+RI+E++A R L
Sbjct: 303 SPEYSVLRTYLDWLIHVPWSQQTED-DTDLVRAAATLERNHYGLPRVKERILEFMAARML 361
Query: 335 K-PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
P + P++CFVGPPGVGKTSL SIA ALGR+F+RISLGGV DEA+IRGHRRTYIG++
Sbjct: 362 AGPRLKSPIICFVGPPGVGKTSLGRSIAEALGRRFVRISLGGVHDEAEIRGHRRTYIGAL 421
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I +K G NPV +LDEIDK GSD RGDPASALLEVLDPEQN F DHYL++P+D
Sbjct: 422 PGRIIKAMKDAGTINPVFMLDEIDKLGSDFRGDPASALLEVLDPEQNVAFTDHYLDLPYD 481
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS-EF 512
LS+V+F+ TAN PIPP L DRMEVI LPGYT EEKL IA R L+PR L+ +GL S E+
Sbjct: 482 LSRVLFITTANLLDPIPPALRDRMEVIHLPGYTEEEKLEIARRFLVPRQLEANGLASPEY 541
Query: 513 -----------------------LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAV 549
L+ ++ ++ +I+ YT EAGVRNLER + A+ R A
Sbjct: 542 AAQSAVAAVHNRDASLENLPGAALRFSDSALRQIIRGYTYEAGVRNLEREIGAICRKVAR 601
Query: 550 KVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLV 609
+VAE G S +
Sbjct: 602 RVAE--------------------------------------GRSYAH-----------I 612
Query: 610 VDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTG 669
V + L + LGPPR+ AE+ G++ G+ WT GG+V VE + M+G+G L LTG
Sbjct: 613 VHPSALMRYLGPPRY-LYGLAEQQDEIGVATGMSWTANGGDVMAVEVSLMKGRGVLSLTG 671
Query: 670 QLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTL 729
QLG+V++ESAQ AL++ R+ A L + + + DIHIH P GAVPKDGPSAG+T+
Sbjct: 672 QLGEVMRESAQAALSFARSNAETLGIKPKR----FETTDIHIHVPVGAVPKDGPSAGITM 727
Query: 730 VTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDL 789
TAL+S F+ + VR D AMTGE+TLRG VLPVGGVK+K+L AHR GI +ILP RN DL
Sbjct: 728 ATALISAFTGRPVRRDVAMTGEITLRGRVLPVGGVKEKVLGAHRAGIHTIILPRRNAVDL 787
Query: 790 VEVPAAVLASLEIILAKRMEDVLEQAF 816
EVPA V L + M DV+ A
Sbjct: 788 EEVPAHVKRRLNFVYVDHMMDVIRCAL 814
>gi|188996065|ref|YP_001930316.1| ATP-dependent protease La [Sulfurihydrogenibium sp. YO3AOP1]
gi|302425073|sp|B2V6N0.1|LON_SULSY RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|188931132|gb|ACD65762.1| ATP-dependent protease La [Sulfurihydrogenibium sp. YO3AOP1]
Length = 800
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 318/753 (42%), Positives = 465/753 (61%), Gaps = 71/753 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
++++G+ R ++EL YY + IE +VE+ + AL K + IS
Sbjct: 97 ILVQGVSRGRIKELKKVDDYYQVGVEI-----IEDPEVEETLEVQALKHSLKDLLDKAIS 151
Query: 132 VLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVD 191
+ KQ +++ +LAD+ + +I EE +L+ +D RL +
Sbjct: 152 L--GKQIVPDLVEIIKSVEEPGRLADLVASILDIKAEEAQQILEILDPVERLRVVHDKFL 209
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
+ + + + +KI + K Q+E+ LRQQ++AI+EELG+ D+ ++++ ++K++ +
Sbjct: 210 KEVGILELQQKIRISAREAIEKDQREYFLRQQIKAIQEELGERDEKQEEIENYKKKIEES 269
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMP I + K+L+RL+KM P R YL+ + +LPW K +++ LDLK AK+ L
Sbjct: 270 GMPDEIKEEALKQLKRLEKMHPDSAEAGVIRTYLDWLVELPWNKRTKD-RLDLKIAKKIL 328
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDA------RGPVLCFVGPPGVGKTSLASSIASALG 365
D DHY L ++K+RI+EYLAV KLK ++ +GP+LCFVGPPGVGKTSL SIA AL
Sbjct: 329 DEDHYDLEKIKERILEYLAVLKLKKESSKDKSIKGPILCFVGPPGVGKTSLGRSIAKALN 388
Query: 366 RKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRG 425
RKF+RISLGGV+DEA+IRGHRRTY+G+MPG++I +K+ NPV++LDE+DK G D RG
Sbjct: 389 RKFVRISLGGVRDEAEIRGHRRTYVGAMPGKIIQAIKQARTKNPVIMLDEVDKIGLDFRG 448
Query: 426 DPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGY 485
DP +ALLEVLDPEQNK F DHYL VPFDLS+V+F+ TANR IP PLLDRMEVI L GY
Sbjct: 449 DPTAALLEVLDPEQNKEFIDHYLGVPFDLSEVMFICTANRLDTIPRPLLDRMEVIRLSGY 508
Query: 486 TPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALAR 545
+ EEKL IA ++LIP+ L ++GL + ++ + + +I+ YTREAGVRNLER + ++ R
Sbjct: 509 SEEEKLHIAKKYLIPKQLKENGLDEKTVEFSDKAITFLIRGYTREAGVRNLERQIGSIIR 568
Query: 546 AAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
A K+ E +++ ++IT
Sbjct: 569 KIAKKIIETGKKR------------------------------------------KYKIT 586
Query: 606 SPLVVDEAMLEKVLGPPRFD-DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGE 664
L+ +K LG P + ++E + V G+ GL WT GGE+ +E T M GKG
Sbjct: 587 PSLI------KKFLGAPIYSTEKEEKDEV---GVVTGLAWTEVGGEILKIEVTKMDGKGN 637
Query: 665 LHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPS 724
L LTG LGDV+KESA+IA ++V+++A +L + E+ D+HIH PAGA+PKDGPS
Sbjct: 638 LVLTGSLGDVMKESARIAFSYVKSKAKELGIDPEE----FGKYDLHIHVPAGAIPKDGPS 693
Query: 725 AGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPER 784
AG+ + T + S+F+ + VR+D AMTGE+TLRG VLPVGG+K+KILAA R GIK VILP+
Sbjct: 694 AGIAITTGIASVFTNRPVRSDVAMTGEITLRGKVLPVGGLKEKILAAKRAGIKTVILPKD 753
Query: 785 NLKDLV-EVPAAVLASLEIILAKRMEDVLEQAF 816
N ++++ ++P V S+ +I +++V + A
Sbjct: 754 NKEEVMSDLPPYVRKSMNLIFVDHIDEVFKIAL 786
>gi|262341098|ref|YP_003283953.1| ATP-dependent protease La [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272435|gb|ACY40343.1| ATP-dependent protease La [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 800
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/769 (40%), Positives = 456/769 (59%), Gaps = 70/769 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V+L+G RF V Y+ A I +LE K
Sbjct: 100 GTVAKILKL---LKMPDGNTT--VILQGKRRFKVNRFIQNDPYFKAEIIALEENKPSC-- 152
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVA-SFEISF 167
+D +++AL K A I +++ + + + FVA + ++
Sbjct: 153 --KDKEYLALVESIKEIA---IKIIQDNPNIPSEASIAIRNIESPSFLINFVAANMNLAT 207
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
++ +L+ DLK R + ++ Q I++ I +V + + Q+E+ L QQ++AI
Sbjct: 208 RDKQKLLEYDDLKKRAMETLRFLNVEHQQIKLKNDIQSRVRSDMDQQQREYFLHQQIKAI 267
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
+EELGD E ++ + K P K ++EL +++++ PQ P YT R YLEL
Sbjct: 268 QEELGD-ISYEKEIDEMRAKASRKKWPKEAKKQFERELLKMQRINPQMPEYTVQRNYLEL 326
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
+ DLPW + S++ DL+ A++ LD DHYGL +VK+RIIEYLAV KL+ D R P+LCF G
Sbjct: 327 MIDLPWGRYSKD-SFDLEYAQKILDRDHYGLEKVKERIIEYLAVLKLRGDMRSPILCFYG 385
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL SIA+AL RK++RISLGG+ DE++IRGHRRTYIG+MPGRL+ +++VG
Sbjct: 386 PPGVGKTSLGRSIATALKRKYVRISLGGLHDESEIRGHRRTYIGAMPGRLLQSIRKVGTS 445
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV ++DEIDK G GDP+SA+LEVLDPEQN +F D++L + +DLSKV+F+ATAN
Sbjct: 446 NPVFVIDEIDKMGLGTNGDPSSAMLEVLDPEQNTSFYDNFLEMGYDLSKVLFIATANSLT 505
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
I P L+DRMEVIE+ GYT EEK +I +H++P+ L +GL L + ++ VI+ Y
Sbjct: 506 HIQPALIDRMEVIEMNGYTVEEKTQIVKKHILPKQLKDNGLKKSDLILGTKQIEKVIESY 565
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TRE+G+R LE+++A LAR A +A ++ + +E
Sbjct: 566 TRESGLRTLEKHIAKLARYVAKHIA---------------------MNKKYVKHFNIE-- 602
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
+E +LG P DR V PG+ GL WTNF
Sbjct: 603 --------------------------KIENILGIPNDPDRYEENNV--PGVVTGLAWTNF 634
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGR 707
GG++ ++E++ +GKG L +TG LG+++KESA IAL +++A + + D + +L+ +
Sbjct: 635 GGDILYIESSLSKGKGNLSITGNLGEIMKESATIALQYIKANYKEFNI---DPI-MLEEK 690
Query: 708 DIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDK 767
++H+H P GAVPKDGPSAG+T++T+LVS F++++++ AMTGE+TLRG VLPVGG+K+K
Sbjct: 691 NVHVHVPEGAVPKDGPSAGITMLTSLVSSFTKRKLKPHLAMTGEITLRGKVLPVGGIKEK 750
Query: 768 ILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
ILAA R IK +IL + N KD+ E+ + L L + M DV+ A
Sbjct: 751 ILAAKRANIKEIILSQDNKKDVEEIKSEHLKGLTFDYVRNMNDVIHLAL 799
>gi|444335600|ref|YP_007391969.1| ATP-dependent Lon protease [Blattabacterium sp. (Blatta orientalis)
str. Tarazona]
gi|444299979|gb|AGD98216.1| ATP-dependent Lon protease [Blattabacterium sp. (Blatta orientalis)
str. Tarazona]
Length = 800
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 311/769 (40%), Positives = 454/769 (59%), Gaps = 70/769 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V+L+G RF V Y+ A I +LE K
Sbjct: 100 GTVAKILKL---LKMPDGNTT--VILQGKRRFKVSRFIQNDPYFKAEIIALEENKPSC-- 152
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVA-SFEISF 167
+D +++AL K A I +++ + + + FVA + ++
Sbjct: 153 --KDKEYLALVESIKEIA---IKIIQDNPNIPSEASIAIRNIESPSFLINFVAANMNLAT 207
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
++ +L+ DLK R + ++ Q I++ I +V + + Q+E+ L QQ++AI
Sbjct: 208 RDKQKLLEYDDLKKRAMETLRFLNVEHQQIKLKNDIQSRVRSDMDQQQREYFLHQQIKAI 267
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
+EELGD E ++ + K K +EL ++++ PQ P YT R YLEL
Sbjct: 268 QEELGD-ISYEKEIDEMRAKASRKKWSKEAKKQFDRELIKMQRTNPQMPEYTVQRNYLEL 326
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
+ DLPW K S++ DL+ A++ LD DHYGL +VK+RIIEYLAV KL+ D R P+LCF G
Sbjct: 327 MIDLPWGKYSKD-SFDLEFAQKILDRDHYGLEKVKERIIEYLAVLKLRGDMRSPILCFYG 385
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL SIA+AL RK++RISLGG+ DE++IRGHRRTYIG+MPGRL+ +++VG
Sbjct: 386 PPGVGKTSLGRSIATALKRKYVRISLGGLHDESEIRGHRRTYIGAMPGRLLQSIRKVGTS 445
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDEIDK G GDP+SA+LEVLDPEQN +F D++L + +DLSKV+F+ATAN
Sbjct: 446 NPVFVLDEIDKIGLGANGDPSSAMLEVLDPEQNTSFYDNFLEMGYDLSKVLFIATANSLS 505
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
I P L+DRMEVIE+ GYT EEK +I +H++P+ L ++GL L + ++ VI+ Y
Sbjct: 506 NIQPALIDRMEVIEMNGYTVEEKTQIVKKHILPKQLKENGLKKSDLILGTQQIEKVIESY 565
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TRE+G+R LE+++A LAR AA +A +D + +E
Sbjct: 566 TRESGLRTLEKHMAKLARYAAKHIA---------------------MDRKYVKRLSIE-- 602
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
+E++LG P DR +V PG+ GL WTNF
Sbjct: 603 --------------------------KIEEILGIPNDPDRYEENKV--PGVVTGLAWTNF 634
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGR 707
GG++ ++E++ +GKG L +TG LG+V+KESA IAL +++A D + + + + +
Sbjct: 635 GGDILYIESSLSKGKGNLSITGNLGEVMKESATIALQYIKAHYKDFNIDPK----MFEEQ 690
Query: 708 DIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDK 767
++H+H P GAVPKDGPSAG+T++T+LVS ++++++R AMTGE+TLRG VLPVGG+K+K
Sbjct: 691 NVHVHVPEGAVPKDGPSAGITMLTSLVSSYTKRKLRPHLAMTGEITLRGKVLPVGGIKEK 750
Query: 768 ILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
ILAA R IK +IL + N KD+ E+ L L + M DV+ A
Sbjct: 751 ILAAKRANIKEIILSQDNKKDVEEIKQDHLKGLTFDYVRDMNDVIHLAL 799
>gi|77459917|ref|YP_349424.1| Lon-A peptidase [Pseudomonas fluorescens Pf0-1]
gi|398974165|ref|ZP_10684902.1| ATP-dependent protease La [Pseudomonas sp. GM25]
gi|77383920|gb|ABA75433.1| ATP-dependent proteinase. Serine peptidase. MEROPS family S16
[Pseudomonas fluorescens Pf0-1]
gi|398142049|gb|EJM30954.1| ATP-dependent protease La [Pseudomonas sp. GM25]
Length = 798
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/759 (43%), Positives = 462/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S ++ E++ E++ + S
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID----EVDAAERESEVFVRS---- 129
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 130 -----LLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEIEDLKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ E ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQIAANGLKKGELEFDEEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A +E AL E
Sbjct: 543 QIAKVCRKAV-------KEHAL------------------------------------EK 559
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
+ ++T+ L LE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 560 RFSVKVTADL------LEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKT 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|90419401|ref|ZP_01227311.1| ATP-dependent protease La [Aurantimonas manganoxydans SI85-9A1]
gi|90336338|gb|EAS50079.1| ATP-dependent protease La [Aurantimonas manganoxydans SI85-9A1]
Length = 819
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 329/795 (41%), Positives = 461/795 (57%), Gaps = 85/795 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q ASD + I+ G A L L ++ P G V V++EG+ R ++ S R
Sbjct: 72 TQKNASDEDPTADAIY--EIGTVANVLQL---LKLPDGTVK--VLVEGMGRAKIESFSPR 124
Query: 89 GTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLE 148
++ A S +E T E+DP + +A A ++S E K K+ E
Sbjct: 125 TEWHEASASLIEET-------EEDP------VEIEALARSVVSEFENYVKLN--KKISPE 169
Query: 149 TV-------PIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAE 201
V KLAD + I E+ ML + ++ RL KA ++ + ++V +
Sbjct: 170 VVGAAGQIEDYSKLADTVASHLAIKIPEKQDMLAMISVRERLEKALGFMESEISVLQVEK 229
Query: 202 KITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHV 261
+I +V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D++ LE +++ + + V
Sbjct: 230 RIRSRVKRQMEKTQREYYLNEQMKAIQKELGDGEDGRDEMAELEDRIKKTKLSKEAREKV 289
Query: 262 QKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRV 321
E+++LK+M P T R YL+ I LPW S + +DLK A++ L++DH+GL +V
Sbjct: 290 AAEMKKLKQMSPMSAESTVVRNYLDWILGLPWGVKSR-VKVDLKKAEDVLEADHFGLEKV 348
Query: 322 KQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEAD 381
K+RI+EYLAV+ + +GP+LC VGPPGVGKTSLA SIA A GR+++R++LGGV+DEA+
Sbjct: 349 KERIVEYLAVQSRQSKLKGPILCLVGPPGVGKTSLAKSIAKATGREYVRMALGGVRDEAE 408
Query: 382 IRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNK 441
IRGHRRTYIGSMPG++I +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN
Sbjct: 409 IRGHRRTYIGSMPGKVIQSMKKAKKTNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQNA 468
Query: 442 TFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPR 501
+F DHYL V +DLS +FV TAN IP PL+DRME+I + GYT +EK+ IA RHL+P+
Sbjct: 469 SFVDHYLEVEYDLSSTMFVTTANTLN-IPAPLMDRMEIIRIAGYTEDEKVEIASRHLLPK 527
Query: 502 VLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALP 561
+ H L E + ++ + +RYTREAGVRN ER L LAR A K+ +
Sbjct: 528 AIRDHALKPEEFSVSADALQEIARRYTREAGVRNFERELMTLARKAVTKILK-------- 579
Query: 562 SSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGP 621
G E ++EV A L LG
Sbjct: 580 -------------------GEETKIEVTA----------------------ANLADYLGV 598
Query: 622 PRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
PR+ E AE G+ GL WT GGE+ +E M GKG++ +TG L +V+KES
Sbjct: 599 PRYRYGE-AETEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLKEVMKESISA 657
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA D + L + RDIH+H P GA PKDGPSAGV + TA+VS+ +
Sbjct: 658 AASYVRSRALDYGIKP----PLFEKRDIHVHVPEGATPKDGPSAGVGMATAIVSVLTGIP 713
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR D AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++P+ N KDL ++P V LE
Sbjct: 714 VRRDIAMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPQENAKDLADIPDNVKNGLE 773
Query: 802 IILAKRMEDVLEQAF 816
I+ RM +VL A
Sbjct: 774 IVPVSRMGEVLRHAL 788
>gi|420113372|ref|ZP_14623115.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CVM10021]
gi|394411991|gb|EJE86171.1| DNA-binding ATP-dependent protease La [Escherichia coli O26:H11
str. CVM10021]
Length = 784
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
ER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 PEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|374335523|ref|YP_005092210.1| ATP-dependent protease La [Oceanimonas sp. GK1]
gi|372985210|gb|AEY01460.1| ATP-dependent protease La [Oceanimonas sp. GK1]
Length = 783
Score = 563 bits (1452), Expect = e-157, Method: Compositional matrix adjust.
Identities = 329/777 (42%), Positives = 462/777 (59%), Gaps = 84/777 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EME 107
G A L + ++ P G V V++EG R ++ L Y+ A L + E E
Sbjct: 72 GTVANVLQM---LKLPDGTVK--VLVEGAQRAHLEALREEDGYFVAEAQYLATEPLDERE 126
Query: 108 Q-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
Q + Q +I L+++ + +S +E + LAD
Sbjct: 127 QEVLVRSAITQFEGYIKLNKKIPPEVLTSLSAIEDAAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ V + RL +++ + ++V +I +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKLEDKQKVLEIVGVGERLEYLMAMMEAEMDLLQVERRIRARVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELG+ D+ D+ AL++K++ AGM + + EL +LK M P T
Sbjct: 231 NEQMKAIQKELGELDEVPDEFEALQQKIEDAGMTDEARQKTEAELAKLKMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW+K S+ + DL A+E LD+DHYGL +VK+RIIEYLAV+ +G
Sbjct: 291 VRGYVDWMISVPWKKRSK-VKKDLAKAEEILDADHYGLEKVKERIIEYLAVQTRTNKLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI
Sbjct: 350 PILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQK 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN +FNDHYL V +DLS V+FV
Sbjct: 410 MAKVGVRNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNHSFNDHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI L GYT +EKL IA RHL+ + + ++GL L + ++ +
Sbjct: 470 ATSNSMH-IPGPLLDRMEVIRLSGYTEDEKLNIAKRHLLSKQISRNGLKESELVVEDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR+LER ++ L R A ++ +KD+ +
Sbjct: 529 IGIIRYYTREAGVRSLEREISKLCRKAVKEIL---------LNKDIKQ------------ 567
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+V++ L+ LG RFD +A E G
Sbjct: 568 ---------------------------VVINGGNLKNYLGVHRFDYGKAEESNQV-GQVT 599
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +E + GKG+L TG LGDV++ES Q ALT VR+RA ++ A
Sbjct: 600 GLAWTEVGGDLLTIEVANVPGKGKLSYTGSLGDVMQESIQAALTVVRSRAEKWRINA--- 656
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP
Sbjct: 657 -DFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVRADVAMTGEITLRGEVLP 715
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIKRV++P N +DL E+P V LEI + +++VLE A E
Sbjct: 716 IGGLKEKLLAAHRGGIKRVVIPAENERDLEEIPDNVKGDLEIHPVRWIDEVLELALE 772
>gi|402819272|ref|ZP_10868841.1| putative atp-dependent protease la protein [alpha proteobacterium
IMCC14465]
gi|402511976|gb|EJW22236.1| putative atp-dependent protease la protein [alpha proteobacterium
IMCC14465]
Length = 808
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 317/754 (42%), Positives = 450/754 (59%), Gaps = 68/754 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EGL R + + +++ A + +E E+ +PD +LS K
Sbjct: 90 PDGTVK--VLVEGLRRARLVDFVPNESFFQASVIGIE------EEDLDNPDLTSLS---K 138
Query: 124 ATAMELISVLEQKQKTGGRTK-VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
+ + ++ +K + V+ E KLAD I E+ +L++V + R
Sbjct: 139 TVVGQFDNYVKMNRKIPQEVQNVIREIDDAQKLADTVAGHLNIQISEKQALLENVSVSER 198
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L ++ + ++V +KI +V+ Q+ K+Q+E+ L +Q++AI++ELG+ +D DDL
Sbjct: 199 LENVLGHMENEVGLLQVEKKIRGRVKRQMEKTQREYYLNEQLKAIQKELGEGEDGMDDLA 258
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
LE +++ + Q E ++LK M P T R YL+ + +PW+K S +
Sbjct: 259 ELEAQIEKTKFSKEAREKAQAEFKKLKNMSPMSAEATVVRNYLDWLLAVPWKKKSR-VKR 317
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
DL A++ L++DHYGL +VK+RI+EYLAV+ +GP+LC VGPPGVGKTSL S+A
Sbjct: 318 DLDNAEQVLETDHYGLEKVKERILEYLAVQNRTNKLKGPILCLVGPPGVGKTSLGKSLAK 377
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
A GR+F+R+SLGGV+DE++IRGHRRTYIGSMPG++I +K+V NP++LLDEIDK G D
Sbjct: 378 ATGREFVRMSLGGVRDESEIRGHRRTYIGSMPGKIIQSMKKVKTSNPLILLDEIDKLGMD 437
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FV TAN IP PLLDRMEVI +
Sbjct: 438 YRGDPASALLEVLDPEQNSTFNDHYLEVDYDLSNVMFVTTANTLN-IPGPLLDRMEVIRI 496
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
PGYT +EK+ IA RHL+P+ + HGL ++ + ++ +I+ YTREAGVRNLER+LA
Sbjct: 497 PGYTEDEKVEIAKRHLLPKSVSNHGLKKGEFELSDDALRQIIRTYTREAGVRNLERDLAN 556
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
+ R K+ + +++D + VIP
Sbjct: 557 VCRKTVTKIVRE----------------------KISD-----VSVIPDN---------- 579
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
LE LG R+ AE+ G+ GL WT GGE+ +E + GK
Sbjct: 580 ------------LEDFLGVSRY-RFGLAEQEDQVGVVTGLAWTQVGGELLTIEGVMLPGK 626
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
G++ TG+LGDV+KES A ++VR+++ DL + L +DIH+H P GA PKDG
Sbjct: 627 GKMTTTGKLGDVMKESIGAASSYVRSKSADLGIEPP----LFDKKDIHVHVPEGATPKDG 682
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAG+ + T +VSL + VR + AMTGE+TLRG VLP+GG+K+K+LAA R GI+RVI+P
Sbjct: 683 PSAGIAMATTIVSLMTGIEVRKEVAMTGEVTLRGQVLPIGGLKEKLLAARRGGIERVIIP 742
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
N KDL EVP + L+II K M +VLE A
Sbjct: 743 HENAKDLSEVPDNIKDGLDIIPVKSMNEVLEIAL 776
>gi|398893209|ref|ZP_10646003.1| ATP-dependent protease La [Pseudomonas sp. GM55]
gi|398184567|gb|EJM72013.1| ATP-dependent protease La [Pseudomonas sp. GM55]
Length = 798
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 329/759 (43%), Positives = 457/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S ++ E++ E++ + S
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID----EVDAPERESEVFVRS---- 129
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 130 -----LLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEVEELKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ E ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQIAANGLKKGELEFDEEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A H +
Sbjct: 543 QIAKVCRKAV---------------------------------------------KEHAL 557
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
F + V MLE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 558 EKRFSVK----VSAEMLEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKT 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|397662071|ref|YP_006502771.1| ATP-dependent protease La [Taylorella equigenitalis ATCC 35865]
gi|394350250|gb|AFN36164.1| ATP-dependent protease La [Taylorella equigenitalis ATCC 35865]
Length = 812
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 324/768 (42%), Positives = 467/768 (60%), Gaps = 62/768 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
GV A L L ++ P G + +V EG+ R + + G+ Y +E T + Q
Sbjct: 73 GVVANILQL---IKLPDGTIKLLV--EGVERIKIDYIEDDGSLYMGEGHIVETTISDESQ 127
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFE 168
V P ++ +F+ E + + ++ Q ++ + +E P+ + +D A ++
Sbjct: 128 V--SPLIRSVGTKFE----EFVKINKRLQPDVVQSILRIED-PV-RFSDTVCAQLHVNQS 179
Query: 169 EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIK 228
++ +L+ +DL RL+ ++ + I + +KI +V+ Q+ KSQ+++ L +Q++AI+
Sbjct: 180 KKQSLLEKIDLIDRLNSLLFFLEYEMDIISLEKKIQDRVKKQMEKSQRDYYLNEQIKAIQ 239
Query: 229 EELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELI 288
+ELG+ ++ D L LE+K++ AGMP + V EL++LK+M P R Y++ +
Sbjct: 240 KELGEGEEGAD-LELLEKKIKEAGMPDETEEKVLGELKKLKQMAPMSAEAAVIRSYIDAV 298
Query: 289 ADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGP 348
+PW+K S+ + L A+E LD+DHYGL +VK+RI+EYLAV+K + P+LC VGP
Sbjct: 299 VSVPWKKKSKA-NTKLSVAQETLDADHYGLEKVKERIVEYLAVQKRGNKLKAPILCLVGP 357
Query: 349 PGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCN 408
PGVGKTSL SIA A RK++R++LGGV DE++IRGHRRTYIG+MPG++I + +VGV N
Sbjct: 358 PGVGKTSLGQSIAKATNRKYVRMALGGVHDESEIRGHRRTYIGAMPGKIIQNMTKVGVKN 417
Query: 409 PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQP 468
P+ LLDEIDK G D RGDP++ALLEVLDPEQN TF DHYL V +DLS V+FVAT+N
Sbjct: 418 PLFLLDEIDKMGQDYRGDPSAALLEVLDPEQNNTFQDHYLEVDYDLSDVLFVATSNTMN- 476
Query: 469 IPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYT 528
IP PLLDRMEVI L GYT +EKL IA HLIP+++ +G+ + L+I + V V++ YT
Sbjct: 477 IPAPLLDRMEVIRLSGYTEDEKLHIAKDHLIPKLMKNNGIKTGELEIDDTAVIDVVRYYT 536
Query: 529 REAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEV 588
REAGVR+LER L + R + E+E+E SSK
Sbjct: 537 REAGVRSLERELGKICRKVVKAIVEKEEE----SSKKT---------------------- 570
Query: 589 IPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFG 648
++ T VVD + L+K LG +F AE+ G GL WT G
Sbjct: 571 --------KIKTT-------VVDSSNLDKYLGVRKF-TFGLAEKENRIGQVTGLAWTEVG 614
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
G++ +E ++GKG++ TG LGDV+KES +A T +R+ A L NL + +D
Sbjct: 615 GDLLSIEVAVVQGKGQIQHTGSLGDVMKESMSVARTVIRSWAYQLGFFD----NLFEKKD 670
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
+HIH P GA PKDGPSAG+ + TALVS +S VRAD AMTGE+TLRG VL +GG+K+K+
Sbjct: 671 MHIHVPDGATPKDGPSAGIAVTTALVSAYSGIPVRADVAMTGEITLRGEVLAIGGLKEKL 730
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LAA R GIK+V++P+ N+KDL E+P V LEII K + +VLE A
Sbjct: 731 LAALRGGIKKVLIPQENVKDLAEIPENVKNGLEIIPVKWINEVLEHAL 778
>gi|295133730|ref|YP_003584406.1| ATP-dependent protease [Zunongwangia profunda SM-A87]
gi|294981745|gb|ADF52210.1| ATP-dependent protease [Zunongwangia profunda SM-A87]
Length = 816
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 310/773 (40%), Positives = 461/773 (59%), Gaps = 71/773 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N GV AR L R ++ P G T V+++G RF++ E++ + A + + TK +
Sbjct: 102 NNIGVVARIL---RVLKMPDGNTT--VIIQGKKRFNISEITQEEPFLRANVEEIPETKPD 156
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FE 164
+ Q+ +F A+ K A+++I + ++ + + FV+S
Sbjct: 157 V----QNEEFGAIIDAIKDLALQII---KSSPNIPSEASFAIKNIESNSFLINFVSSNMN 209
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+S EE+ +L + DLK R + ++ Q + + I KV+ +S+ Q+E+ L QQM
Sbjct: 210 LSVEEKQNLLATNDLKERALATLKFMNIENQKLALKNDIQSKVQSDMSQQQREYFLHQQM 269
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+ I+EELG ED++ + + + ++ KH +KEL ++++M PQ Y+ R Y
Sbjct: 270 KTIQEELG-GVSHEDEIEEMRVRAKDKKWSEDVQKHFEKELSKMQRMNPQVAEYSIQRNY 328
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
L+L DLPW++ S++ DLK AK+ LD DHYGL VK+RIIEYLAV KL+ D + P+LC
Sbjct: 329 LDLFLDLPWDEFSKD-KFDLKRAKKILDRDHYGLDDVKRRIIEYLAVLKLRNDMKSPILC 387
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
GPPGVGKTSL S+A ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR+I LK+
Sbjct: 388 LYGPPGVGKTSLGKSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKA 447
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G NPV +LDEIDK GDP+SALLEVLDPEQN F+D++L + FDLSKV+F+AT N
Sbjct: 448 GTSNPVFVLDEIDKLSIGNAGDPSSALLEVLDPEQNSEFHDNFLELGFDLSKVMFIATCN 507
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
I P L DRME+I + GYT EEK+ IA RHL+P+ L +HGL + L+I +A ++ ++
Sbjct: 508 SLNTIQPALRDRMEIINVTGYTIEEKIEIAKRHLLPKQLKEHGLTKDDLKIGKAQLEKIV 567
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKD-VHRLGSPLLDNRLADGAE 583
+ YTRE+GVR LE+ +A + R A +A +E +++D + LGSP L+
Sbjct: 568 EGYTRESGVRALEKQIAKVVRYGAKSIAMEEDYNKKITNEDIIEILGSPRLE-------- 619
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
R+ E G+ GL
Sbjct: 620 -------------------------------------------RDKYENNEVAGVVTGLA 636
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GG++ F+E+ +GKG L++TG LG V+KESA IA+ ++++ A +L + A +
Sbjct: 637 WTQVGGDILFIESILSKGKGNLNITGNLGKVMKESATIAMEYIKSNAEELGIEA----GI 692
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ ++HIH P GA PKDGPSAG+T++T+LVSLF++++V+ AMTGE+TLRG VLPVGG
Sbjct: 693 FEKYNVHIHVPEGATPKDGPSAGITMLTSLVSLFTQRKVKKSIAMTGEITLRGKVLPVGG 752
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+K+KILAA R IK +IL + N +D+ E+ L L M +V++ A
Sbjct: 753 IKEKILAAKRARIKELILCKENERDIKEIKDEYLKGLTFHYVNEMSEVIDIAI 805
>gi|170744620|ref|YP_001773275.1| ATP-dependent protease La [Methylobacterium sp. 4-46]
gi|168198894|gb|ACA20841.1| ATP-dependent protease La [Methylobacterium sp. 4-46]
Length = 806
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 333/794 (41%), Positives = 464/794 (58%), Gaps = 86/794 (10%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
QV A+D + I+ G A L L ++ P G V V++EG R ++
Sbjct: 62 QVNATDDDPATDAIY--TIGTLASVLQL---LKLPDGTVK--VLVEGAGRAKIRSFVRSD 114
Query: 90 TYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLL 147
YY A +L P+ + + +A A +IS E K + +V+
Sbjct: 115 EYYAAEAEAL-------------PNDLGDRIEAEALARSVISEFENYVKLNKKISPEVVS 161
Query: 148 ETVPI---HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
+ I KLAD + + ++ +L+ + RL + L++ + ++V ++I
Sbjct: 162 AVIQIDEPSKLADTVASHLAVKISDKQAILEIPTVAERLERVLSLMESEISVLQVEKRIR 221
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D+L LE K++ + E
Sbjct: 222 TRVKRQMEKTQREYYLNEQMKAIQKELGD-EDGRDELAELEDKIEKTKLSKEARDKAMAE 280
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L++L++M P T R YL+ + +PW K S+ I DL A+ LDSDH+GL +VK+R
Sbjct: 281 LKKLRQMSPMSAEATVVRNYLDWMLGIPWGKRSK-IKKDLVGAQNLLDSDHFGLDKVKER 339
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV++ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRG
Sbjct: 340 IVEYLAVQQRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRG 399
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG+++ +++ NP++LLDEIDK G D RGDP++ALLEVLDPEQN +FN
Sbjct: 400 HRRTYIGSMPGKIVQSMRKAKTSNPLILLDEIDKMGMDFRGDPSAALLEVLDPEQNASFN 459
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+FV TAN IPP LLDRMEVI + GYT EEKL IA RHLIP L
Sbjct: 460 DHYLEVDYDLSNVMFVTTANTLN-IPPALLDRMEVIRIAGYTEEEKLEIARRHLIPNALK 518
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+HGL + I + + L+I+RYTREAGVRNLER L+ L R A ++
Sbjct: 519 KHGLAEKEWSIDDDGLLLLIRRYTREAGVRNLERELSNLIRKAVKEIL------------ 566
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRF 624
+S R+ V DE L+ LGP RF
Sbjct: 567 ---------------------------------ISKVVRVA---VTDEN-LDTFLGPARF 589
Query: 625 --DDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
+ E ++V G+ GL WT GGE+ +E M GKG++ +TG L DV+KES A
Sbjct: 590 RYGEVETDDQV---GVVTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISAA 646
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA D + L + RDIH+H P GA PKDGPSAG+ + TA+VS+ + V
Sbjct: 647 ASYVRSRAVDFGVEPP----LFERRDIHVHVPEGATPKDGPSAGIAMATAIVSVITGIPV 702
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL ++PA+V LEI
Sbjct: 703 RRDIAMTGEVTLRGRVLPIGGLKEKLLAALRGGIKTVLIPEENAKDLADIPASVKNGLEI 762
Query: 803 ILAKRMEDVLEQAF 816
+ RM+ VL++A
Sbjct: 763 VPVSRMDQVLQKAL 776
>gi|194435313|ref|ZP_03067525.1| ATP-dependent protease La [Shigella dysenteriae 1012]
gi|417674542|ref|ZP_12323975.1| ATP-dependent protease La [Shigella dysenteriae 155-74]
gi|194416445|gb|EDX32602.1| ATP-dependent protease La [Shigella dysenteriae 1012]
gi|332085826|gb|EGI90990.1| ATP-dependent protease La [Shigella dysenteriae 155-74]
Length = 784
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A RK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATRRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|238791433|ref|ZP_04635071.1| ATP-dependent protease La [Yersinia intermedia ATCC 29909]
gi|238729049|gb|EEQ20565.1| ATP-dependent protease La [Yersinia intermedia ATCC 29909]
Length = 784
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 459/767 (59%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIEME-----QVEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE M E E + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPVMDDREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLASLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDVTERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DTPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIMSIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R AVK N L D +E+ G++
Sbjct: 544 LEREISKLCRK-AVK-------------------------NLLMDKTVKHIEI--NGDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L+ LG + D A RV G GL WT GG++
Sbjct: 575 -------------------LKDFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++PE N +DL E+P V+A LEI K ++DVL A +
Sbjct: 727 HRGGIKIVLIPEDNKRDLEEIPDNVIADLEIHPVKLIDDVLAIALQN 773
>gi|336322458|ref|YP_004602425.1| anti-sigma H sporulation factor LonB [Flexistipes sinusarabici DSM
4947]
gi|336106039|gb|AEI13857.1| anti-sigma H sporulation factor, LonB [Flexistipes sinusarabici DSM
4947]
Length = 777
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 319/798 (39%), Positives = 469/798 (58%), Gaps = 72/798 (9%)
Query: 18 VGGDSSERASKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGL 77
V GD+ ++ V + G N + +N G+ A L + ++ P G + V++EG
Sbjct: 39 VAGDTDKKIFLV-LQKDSGVNDPGIEDLYNVGLVADILQV---LKLPDGSIK--VLVEGA 92
Query: 78 CRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQ 137
R +++L E T + ++ E + + + + M+ Q +
Sbjct: 93 YRAEIKDLFVEE----------ECTYVNVKPFEDKNEDETFYKYLRESLMQHFKEFAQTE 142
Query: 138 KTGGR--TKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQ 195
+ +++ ++ L+ + ++ I EQ +L+ L R+ K E ++ +
Sbjct: 143 NKIPKEIYDSIVKMDDLNNLSYMIASNLSIRVSEQQEILEIASLSERIEKIIEFIEMETE 202
Query: 196 SIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPS 255
++ +KI Q+V+ Q++K+Q+E+ L +Q++AI +ELG ++D + D+ L+ + MP
Sbjct: 203 IKKIDKKIKQRVKSQMTKTQREYYLNEQIKAINKELGRDEDIKADIEELQTAINEKKMPK 262
Query: 256 NIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDH 315
+ + +KEL++L+ M P T R YL+ I LPW + +E+I LDL+ A+ L+ DH
Sbjct: 263 IVREKAEKELKKLRIMPPMSAETTVVRNYLDWIVSLPWGEYTEDI-LDLEKAENILNRDH 321
Query: 316 YGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGG 375
YGL + K+RI+E+LAV+K +GP+LCFVGPPGVGKTSLA SIA ++ R F+R+SLGG
Sbjct: 322 YGLEKPKERILEFLAVKKFSERIKGPILCFVGPPGVGKTSLAKSIAESMNRNFVRLSLGG 381
Query: 376 VKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVL 435
V+DEA+IRGHRRTYIGSMPG++I ++R NPV LLDEIDK G D RGDP+SALLE L
Sbjct: 382 VRDEAEIRGHRRTYIGSMPGKIIQSVRRAESMNPVFLLDEIDKLGMDFRGDPSSALLEAL 441
Query: 436 DPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAM 495
DPEQN +F+DHYL V FDLSKV F+ TAN + IP LLDRMEVI +PGYT EKL IA
Sbjct: 442 DPEQNNSFSDHYLEVDFDLSKVFFITTANTVESIPHALLDRMEVIRIPGYTEREKLNIAE 501
Query: 496 RHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQE 555
++L P+ L +H + +E + I E + VI+ YT+EAGVRNLER LA++ R AA K+ +
Sbjct: 502 KYLFPKQLSEHNIPAEKVDIAENAILDVIRYYTKEAGVRNLERELASVIRKAAKKLVTEN 561
Query: 556 QEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAML 615
+TS + V L
Sbjct: 562 N-----------------------------------------------VTS-VKVTRKNL 573
Query: 616 EKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVI 675
E +LG RF E E G++ GL WT +GG++ E A G G+L +TG +GDV+
Sbjct: 574 ENLLGVKRF-RLEHVEESEDVGVATGLAWTPYGGDILQTEVAAYEGNGQLQITGHIGDVM 632
Query: 676 KESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVS 735
+ESA+ AL+ V++RA Q+ A + DIH+H P GAVPKDGPSAG+T+ TA++S
Sbjct: 633 QESARTALSVVKSRARRFQVPAYK----FKDFDIHLHVPEGAVPKDGPSAGITMATAILS 688
Query: 736 LFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAA 795
S V + AM+GE+ LRG VLPVGG+K+K+LAAHR G+K+VILPE N KDL EVP+
Sbjct: 689 ALSGIYVDCNIAMSGEINLRGKVLPVGGIKEKVLAAHRAGVKKVILPEDNRKDLTEVPSD 748
Query: 796 VLASLEIILAKRMEDVLE 813
V + ++ AK ++DV +
Sbjct: 749 VKKQISVVFAKTIDDVFD 766
>gi|415938747|ref|ZP_11555481.1| ATP-dependent protease [Herbaspirillum frisingense GSF30]
gi|407759381|gb|EKF69076.1| ATP-dependent protease [Herbaspirillum frisingense GSF30]
Length = 788
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 328/762 (43%), Positives = 465/762 (61%), Gaps = 82/762 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVE--------QDPDF 115
P G V V++EG R + +S T++ A ++ +E + + +VE Q +
Sbjct: 71 PDGTVK--VLVEGAQRARIHHISELETHFVADLTPVESEQGDEAEVEAMRRTIVQQFDQY 128
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ L+++ + +S ++ GR LAD A + E++ V+L+
Sbjct: 129 VKLNKKIPPEILTSLSGIDD----AGR------------LADTIAAHLPLKLEQKQVILE 172
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
++ R ++ L ++V ++I +V+ Q+ KSQ+E+ L +Q++AI++ELG+ +
Sbjct: 173 IFNVAKRYEHLLGQLEGELDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQKELGEGE 232
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D L LE+K+ +A MP + Q EL++LK M P T R Y++ + LPW+K
Sbjct: 233 DGAD-LEELEKKILAAKMPKEALEKAQSELKKLKLMSPMSAEATVVRNYIDTLVALPWKK 291
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ ++ DL A++ L+ DHYGL +VK+RI+EYLAV++ + P+LCFVGPPGVGKTS
Sbjct: 292 KSK-VNNDLTNAEKVLEGDHYGLEKVKERILEYLAVQQRVDKLKAPILCFVGPPGVGKTS 350
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPG+++ L +VGV NP+ LLDE
Sbjct: 351 LGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLSKVGVRNPLFLLDE 410
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK G D RGDP+SALLEVLDPEQN TF+DHY+ V FDLS V+FVAT+N IPP LLD
Sbjct: 411 IDKLGMDFRGDPSSALLEVLDPEQNHTFSDHYIEVDFDLSDVMFVATSNSFN-IPPALLD 469
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EK IA R+L+P+ + +GL + + E+ ++ +I+ YTREAGVR+
Sbjct: 470 RMEVIRLSGYTEDEKTSIAQRYLLPKQIKNNGLKEGEISVAESAIRDIIRYYTREAGVRS 529
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ + R + ++QE+
Sbjct: 530 LEREVSKICRKVVKMLLLKKQEK------------------------------------- 552
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
+V+ T R L+K LG RF D AE+ G VGL WT GG++ +E
Sbjct: 553 -KVTVTSR----------NLDKFLGVRRF-DFGIAEKENQIGQVVGLAWTEVGGDLLTIE 600
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
A M GKG++ TG LGDV+KES + A T VR+RA L + +E + + DIHIH P
Sbjct: 601 AVNMPGKGQIIRTGTLGDVMKESIEAARTVVRSRARKLGIKSE----VFEKSDIHIHVPE 656
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAG+ + TALVS+FS VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR G
Sbjct: 657 GATPKDGPSAGIAMTTALVSIFSGIPVRADVAMTGEITLRGEVLPIGGLKEKLLAAHRGG 716
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
IK V++PE+N+KDL E+P V LEII + ++ VLE A E
Sbjct: 717 IKTVLIPEQNVKDLAEIPDNVKNKLEIIPVRWIDKVLEVALE 758
>gi|392957359|ref|ZP_10322883.1| ATP-dependent proteinase La 1 [Bacillus macauensis ZFHKF-1]
gi|391876766|gb|EIT85362.1| ATP-dependent proteinase La 1 [Bacillus macauensis ZFHKF-1]
Length = 772
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 289/665 (43%), Positives = 419/665 (63%), Gaps = 55/665 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ + + +E+ +L+ +D+K RL L++ + + + +KI Q+V+ + +
Sbjct: 162 RLADVIASHLSLKIKEKQKVLEIIDVKDRLHHLISLLNNEKEVLGLEKKIGQRVKKAMEQ 221
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+ LR+QM+AI++ELGD + ++ L+ K++ + MP ++ + KEL R +KM
Sbjct: 222 TQKEYYLREQMKAIQKELGDKEGKSGEVATLKEKIEGSDMPEHVREIAFKELDRYEKMPG 281
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
+ R Y+E + +LPW +E+ LDL + L+ DHYGL +VK+R++EY+AV++
Sbjct: 282 SSAESSVIRNYIEWLINLPWTTETED-RLDLNHTETILNEDHYGLEKVKERVLEYIAVQQ 340
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LC GPPGVGKTSLA S+A A+GR F+RISLGGV+DEA+IRGHRRTY+G+M
Sbjct: 341 LTKSLKGPILCLAGPPGVGKTSLARSVARAIGRNFVRISLGGVRDEAEIRGHRRTYVGAM 400
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGRLI G+K+ G NPV LLDEIDK +D RGDP+SALLEVLDPEQN TF+DH++ P+D
Sbjct: 401 PGRLIQGMKKAGSINPVFLLDEIDKMANDFRGDPSSALLEVLDPEQNNTFSDHFIEEPYD 460
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+F+ TAN IP PLLDRME+I + GYT EK+ IA HL+P+ L HGL
Sbjct: 461 LSKVMFITTANNLATIPGPLLDRMEIISIAGYTEVEKVHIAKNHLLPKQLKAHGLKKSQF 520
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
Q+ + + + ++YTREAGVR++ER LA+L R A ++ E+++ ++K++
Sbjct: 521 QVKDEAIVTLARQYTREAGVRSMERQLASLCRKGAKQLVAGEKKRVTITAKNI------- 573
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
E LG PRF + AE
Sbjct: 574 ------------------------------------------EDYLGKPRFRYGQ-AEME 590
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G + GL +T GG+ +E + GKG+L LTG+LGDV+KESA AL++VR+RA +
Sbjct: 591 DQVGAATGLAYTTAGGDTLSIEVSTTPGKGKLSLTGKLGDVMKESAHAALSYVRSRAKEF 650
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ + + DIHIH P GA PKDGPSAG+T+ TALVS S + VR D MTGE+T
Sbjct: 651 GIDPQ----FYEKTDIHIHVPEGATPKDGPSAGITMATALVSALSGRAVRKDVGMTGEIT 706
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K L+AHR G++ +ILP+ N KD+ ++P +V L I +++VL+
Sbjct: 707 LRGRVLPIGGLKEKSLSAHRAGLQTIILPKENEKDIEDIPESVRNDLTFIPVNHLDEVLK 766
Query: 814 QAFEG 818
A G
Sbjct: 767 HALVG 771
>gi|261346362|ref|ZP_05974006.1| ATP-dependent protease La [Providencia rustigianii DSM 4541]
gi|282565676|gb|EFB71211.1| ATP-dependent protease La [Providencia rustigianii DSM 4541]
Length = 809
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 333/784 (42%), Positives = 460/784 (58%), Gaps = 107/784 (13%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYY--------------------TARISSLEMTK 103
P G V V++EGL R + L+ G Y+ T + + E+
Sbjct: 84 PDGTVK--VLVEGLRRARITSLTDNGEYFLAQAEYLLNDDAKSAAAYDETGTVPTAELVD 141
Query: 104 IEMEQ-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLA 156
E EQ V Q +I L+++ + + +EQ Q + KLA
Sbjct: 142 -EKEQEVLYRTIVSQFESYIKLNKKIPPEVLTSLHAIEQDQ--------------LDKLA 186
Query: 157 DIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQK 216
D + + ++ +L+ ++ R+ +++ + ++V ++I +V+ Q+ KSQ+
Sbjct: 187 DTIASHMPLKLADKQRVLEMANIAERVEFLMAMMESETELLQVEKRIRNRVKKQMEKSQR 246
Query: 217 EFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQP 276
E+ L +QM+AI++ELG+ DD D+ +L+RK++ A MP + + EL++LK M P
Sbjct: 247 EYYLNEQMKAIQKELGEMDDAPDEYESLKRKIEEAKMPKEAQEKAEAELQKLKMMSPMSA 306
Query: 277 GYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKP 336
T R Y++ + +PW K S+ + DL A+E LD+DHYGL RVK RI+EYLAV+
Sbjct: 307 EATVVRSYIDWMVQVPWHKRSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVS 365
Query: 337 DARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGR 396
+GP+LC VGPPGVGKTSL SIA A GR++ R++LGGV+DEA+IRGHRRTYIGSMPG+
Sbjct: 366 KIKGPILCLVGPPGVGKTSLGQSIAKATGREYTRMALGGVRDEAEIRGHRRTYIGSMPGK 425
Query: 397 LIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 456
LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS
Sbjct: 426 LIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSD 485
Query: 457 VIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIP 516
V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA RHL+ + ++++ L L I
Sbjct: 486 VMFVATSN-SMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLSKQIERNALKKGELSID 544
Query: 517 EAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDN 576
++ + +I+ YTREAGVR LER ++ L R A +AL L+D
Sbjct: 545 DSALMSIIRYYTREAGVRGLEREISKLCRKAV---------KAL------------LMDK 583
Query: 577 RLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVA 634
+L IT+ L+ LG RFD + RV
Sbjct: 584 KL---------------------KHISITAD------NLKDYLGVRRFDYGHADTENRV- 615
Query: 635 APGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQ 694
G GL WT GG++ +E + GKG+L TG LG+V++ES Q ALT VRARA L
Sbjct: 616 --GQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQTALTVVRARAEKL- 672
Query: 695 LVAEDGMN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEM 752
G+N + RDIH+H P GA PKDGPSAG+ + TALVS + V+AD AMTGE+
Sbjct: 673 -----GINGDFYEKRDIHVHVPEGATPKDGPSAGIAMSTALVSCLTGNPVKADVAMTGEI 727
Query: 753 TLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
TLRGLVLP+GG+K+K+LAAHR GIK V++PE N +DL E+P V+A L+I K +E+VL
Sbjct: 728 TLRGLVLPIGGLKEKLLAAHRGGIKTVLIPEENKRDLEEIPQNVIADLKIHPVKTIEEVL 787
Query: 813 EQAF 816
A
Sbjct: 788 SLAL 791
>gi|417606431|ref|ZP_12256960.1| ATP-dependent protease La [Escherichia coli STEC_DG131-3]
gi|345365645|gb|EGW97752.1| ATP-dependent protease La [Escherichia coli STEC_DG131-3]
Length = 784
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + V AD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVCADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|157369340|ref|YP_001477329.1| DNA-binding ATP-dependent protease La [Serratia proteamaculans 568]
gi|157321104|gb|ABV40201.1| ATP-dependent protease La [Serratia proteamaculans 568]
Length = 784
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 328/765 (42%), Positives = 459/765 (60%), Gaps = 89/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPAIDEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLSDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLLKAQEVLDIDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ L+++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQLERNALKKGELTVDDSAITGIIRFYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + + L+D +L
Sbjct: 544 LEREISKLCRKA---------------------VKTLLMDKKLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG R D A RV G GL WT GG++
Sbjct: 568 ------------IEINGDNLKDYLGVQRVDYGRADTENRV---GEVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
HR GIK V++P N +DL E+PA V+A L I +R+++VL+ A
Sbjct: 727 HRGGIKTVLIPYENKRDLEEIPANVIADLVIHPVQRIDEVLDLAL 771
>gi|297516634|ref|ZP_06935020.1| DNA-binding ATP-dependent protease La [Escherichia coli OP50]
Length = 784
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DH L V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHCLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|384228450|ref|YP_005620185.1| ATP-dependent protease LA [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|345539383|gb|AEO08250.1| ATP-dependent protease LA [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 782
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/763 (41%), Positives = 456/763 (59%), Gaps = 81/763 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R S++ L+ G Y+ A + ++ KI E EQ + Q +
Sbjct: 84 PDGTVK--VLIEGLQRASIKNLTNNGQYFIAEVELIQPPKILEKEQKVLIRTTINQFESY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ +E+++ L + KLAD A + ++ +L+
Sbjct: 142 IKLNKKI---PLEILNTLNNITNS-------------EKLADTIAAHMPLKLNDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
++ RL +++ + + V +KI +V+ Q+ KSQ+E+ L +Q++AI++ELGD D
Sbjct: 186 ICNINERLEFLMAIMESEIDLLLVEKKIRNRVKKQMEKSQREYYLNEQIKAIQKELGDMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
+ D+ L+RK+ ++ MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 EIPDENQILKRKITASKMPKEAKEKTESELQKLKMMSPMSAEATVVRSYIDWMIQVPWH- 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A +I D++ AK+ LD DH+GL +VK+RI+EYLAV+ K +GP+LC +GPPGVGKTS
Sbjct: 305 ARTKIKKDIQQAKKILDIDHFGLEKVKERILEYLAVQSRKNKIKGPILCLIGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA + GRK++R++LGG++DEA+IRGHRRTYIGSMPG+LI + + V NP+ LLDE
Sbjct: 365 LGKSIARSTGRKYVRMALGGIRDEAEIRGHRRTYIGSMPGKLIQKIAKSKVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK D+R DPASALLEVLDPEQN TFNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSCDIRVDPASALLEVLDPEQNTTFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+I L GYT EKL IA ++L P+ ++++GL + L+I + + +IQ YTREAGVRN
Sbjct: 484 RMEIIRLSGYTENEKLNIAKKYLYPKQIERNGLKKDELKITDCAIISIIQNYTREAGVRN 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ + R ++ N L D + ++E
Sbjct: 544 LEREISKICRK--------------------------VVKNLLLDKSLTKIE-------- 569
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
V L+K LG RF+ ++ + G +GL WT GGE+ +E
Sbjct: 570 --------------VKNQNLKKFLGIKRFNYGKSNCKNQI-GQVIGLAWTEVGGELLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ GKG+L TG LG V++ES Q ALT VR+ + L + N + DIH+H P
Sbjct: 615 TACIPGKGKLTYTGSLGKVMQESIQAALTVVRSESCQLGIQK----NFYEKYDIHVHVPE 670
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAG+ + TA+VS + V++D AMTGE+TLRG VLP+GG+K+K+LAAHR G
Sbjct: 671 GATPKDGPSAGIAMCTAIVSSLKKNPVKSDIAMTGEITLRGQVLPIGGLKEKLLAAHRGG 730
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
IK V++P N +DL E+P ++ L+I K + +VL AFE
Sbjct: 731 IKTVLIPYENKRDLEEIPKNIIKGLKIHPIKNIIEVLNLAFEN 773
>gi|163751871|ref|ZP_02159085.1| ATP-dependent protease La [Shewanella benthica KT99]
gi|161328221|gb|EDP99385.1| ATP-dependent protease La [Shewanella benthica KT99]
Length = 785
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 333/779 (42%), Positives = 468/779 (60%), Gaps = 88/779 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE---MTKIE 105
G A L L ++ P G V V++EG R +++ S +++ A LE M + E
Sbjct: 72 GTVASILQL---LKLPDGTVK--VLVEGGKRAHIEKYSDEESFFVATARYLESEPMAEKE 126
Query: 106 MEQ-----VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
E V Q +I L+++ + +S +E+ + LAD
Sbjct: 127 EEALVRSAVSQFEGYIKLNKKIPPEVLTSLSGIEEAAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ VD+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKLEDKQSVLEMVDVAERLEYLMAMMESEIDLLQVEKRIRSRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ D+ L +K++ A MP + EL +LK M P T
Sbjct: 231 NEQMKAIQKELGDIDESHDEFETLAKKIEEAKMPQEAKEKATSELNKLKMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW K S+ I DL A++ LD+DH+GL +VK+RI+EYLAV+ +G
Sbjct: 291 VRSYVDWMISVPWHKRSK-IKRDLAKAQDVLDADHFGLEKVKERILEYLAVQSRVKQLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GRK+IR++LGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 350 PILCLVGPPGVGKTSLGQSIARATGRKYIRVALGGVRDEAEIRGHRRTYIGSMPGKVIQK 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ + GV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FV
Sbjct: 410 MAKAGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSAFSDHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N + IP PLLDRMEVI L GYT +EKL IA +HL+P+ ++++GL + + + ++ +
Sbjct: 470 ATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKKHLLPKQIERNGLKLKEVTVHDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVR+LER L+ + R K V R+ LLD L
Sbjct: 529 IGIIRYYTREAGVRSLERELSKICR------------------KVVKRI---LLDKTLKH 567
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ VD+ L+ LG R D AE G
Sbjct: 568 ---------------------------VDVDQDNLKSFLGVQRC-DYGRAESNNQIGQVT 599
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L G
Sbjct: 600 GLAWTEVGGDLLTIEATSVPGKGKLSYTGSLGDVMQESIQAAMTVVRARAEQL------G 653
Query: 701 MN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+N + RDIH+H P GA PKDGPSAG + TALVS + VRAD AMTGE+TLRG V
Sbjct: 654 INPDFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRADVAMTGEITLRGEV 713
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LP+GG+K+K+LAAHR G K V++P+ N +DL E+PA V+A L+I + +++VL+ A E
Sbjct: 714 LPIGGLKEKLLAAHRGGTKIVLIPKDNERDLEEIPANVIADLKIYPVRWIDEVLKLALE 772
>gi|229163426|ref|ZP_04291377.1| ATP-dependent protease La 1 [Bacillus cereus R309803]
gi|228619995|gb|EEK76870.1| ATP-dependent protease La 1 [Bacillus cereus R309803]
Length = 773
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 456/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E + I ++ E+VE D + AL R
Sbjct: 81 PNG--TLRVLVEGLHRAEVVEFIEEENFVQVSIQTV------TEKVEDDLEEKALMRTLL 132
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 133 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLISSHLPIKTKQKQEILEIVSVKERL 190
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 191 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 250
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 251 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYMDWLLALPWTEATEDM-ID 309
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 310 LAHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 369
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 370 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 429
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 430 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 489
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 490 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 549
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + + K+
Sbjct: 550 CRKAAKIIVTAERKRIVVTEKN-------------------------------------- 571
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+VD +LG F +A E+ G++ GL +T GG+ +E + GKG
Sbjct: 572 -----IVD------LLGKHIFRYGQA-EKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 619
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 620 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 675
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 676 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 735
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 736 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 770
>gi|187920402|ref|YP_001889433.1| ATP-dependent protease La [Burkholderia phytofirmans PsJN]
gi|302425038|sp|B2TFQ5.1|LON_BURPP RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|187718840|gb|ACD20063.1| ATP-dependent protease La [Burkholderia phytofirmans PsJN]
Length = 804
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/747 (41%), Positives = 454/747 (60%), Gaps = 65/747 (8%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
++ +G+ RF + + AR+ L E ++P A + + A E+I
Sbjct: 110 LICQGVERFRLIAPVEGLGFRAARVEFLP------ETTARNPAVDARALVLRQRAGEMIG 163
Query: 132 VLEQKQKTGGRTKVLLETVPIHKL-ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELV 190
+L GG L+ + + L AD +I E + +L+++D+ RL K + V
Sbjct: 164 LL---PNAGGELVRALDAIELPGLLADTIAGLLDIPPERKQEILETLDVCKRLDKVLDAV 220
Query: 191 DRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQS 250
++ +R++++I ++ G++ + Q+E +LR+Q+R I+ ELG+N + +++ L +++
Sbjct: 221 AGRIEVLRLSQEIGEQTRGRIDQRQREMMLREQLRTIQNELGENIESREEVRKLTEAIEA 280
Query: 251 AGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKER 310
A MP + H +KEL RL++M Y+ S YLE + +LPW +E +D+ A++
Sbjct: 281 AHMPPEVESHARKELGRLERMPEASSEYSISVSYLEWLTELPWPLPAEA-PIDIARARQI 339
Query: 311 LDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIR 370
LD H+GL +VK+RI+EYL VRKL P + P+LCF+GPPGVGKTSL SIA AL R F+R
Sbjct: 340 LDEAHFGLDKVKRRILEYLGVRKLNPHGKAPILCFLGPPGVGKTSLGQSIARALERPFVR 399
Query: 371 ISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASA 430
+SLGGV DEA+IRGHRRTYIG+MPG +I +++ G N VMLLDE+DK G V GDPA+A
Sbjct: 400 VSLGGVHDEAEIRGHRRTYIGAMPGNIIQAIRKAGARNCVMLLDELDKLGQGVHGDPAAA 459
Query: 431 LLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEK 490
+LEVLDPEQN +F D+YL VPFDLS ++FVATAN+ + I PL DRME+++LPGYT EK
Sbjct: 460 MLEVLDPEQNASFRDNYLGVPFDLSAIVFVATANQIEGIAGPLRDRMEILDLPGYTEAEK 519
Query: 491 LRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVK 550
+IA R L+PR L+ GL + ++P+ ++ +I+ YTREAGVR+LER + A+ R A++
Sbjct: 520 FQIAQRFLVPRQLEACGLTAAQCELPDETLRAIIRDYTREAGVRSLERQIGAVFRYVALR 579
Query: 551 VAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVV 610
VAE STHE R++S
Sbjct: 580 VAED--------------------------------------PSTHERIEPDRLSS---- 597
Query: 611 DEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQ 670
+LG RF+ E A R + PG+ GL WT GG++ F+EA++ G G L LTGQ
Sbjct: 598 -------ILGHRRFES-EVAMRTSLPGVVTGLAWTPVGGDLLFIEASSTPGGGRLVLTGQ 649
Query: 671 LGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLV 730
LGDV+KES Q ALT V++R L + D N RDIH+H PAGAVPKDGPSAGV +
Sbjct: 650 LGDVMKESVQAALTLVKSRCESLHI---DCSN-FDKRDIHVHVPAGAVPKDGPSAGVAMF 705
Query: 731 TALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLV 790
A+ SL + VR+D A+TGE++LRG+VLPVGG+K+K+LAA R GIK V+LP RN DL
Sbjct: 706 IAIASLLMGRAVRSDCAVTGEISLRGIVLPVGGIKEKVLAALRGGIKTVLLPARNAPDLE 765
Query: 791 EVPAAVLASLEIILAKRMEDVLEQAFE 817
++P + +L + ++D + + E
Sbjct: 766 DIPVDARNQMRFVLLETVDDAVREIIE 792
>gi|317153550|ref|YP_004121598.1| ATP-dependent protease La [Desulfovibrio aespoeensis Aspo-2]
gi|316943801|gb|ADU62852.1| ATP-dependent protease La [Desulfovibrio aespoeensis Aspo-2]
Length = 821
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 333/846 (39%), Positives = 488/846 (57%), Gaps = 96/846 (11%)
Query: 1 MLLLIRQWAPLFLKVSGVGGDSSERASKVQVG-----------ASDGKNQQEVIHWHNRG 49
+++ R PLF VG ++S +A + V S K E + G
Sbjct: 25 VVMFPRSIVPLF-----VGREASIKAIETAVADFGKQIFLVTQKSPEKEHPEPDDLYAIG 79
Query: 50 VAARALHLSRGVEKPSGRVTYIVVLEGLCRF--------SVQELSTRGTYYTARISSLEM 101
++ L + R P G T V+ EG+ R S E+ G Y +AR+S ++
Sbjct: 80 TVSKILQMLR---LPDG--TIKVLFEGVSRATWEPASKRSAHEVDQEGGYPSARVSIIQ- 133
Query: 102 TKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFV 160
E + AL R + E V +K + + T+ LAD +
Sbjct: 134 -----EPAAVTAEASALVRAVHESLDEFGKV---NKKVAPEAILAMSTLKDPGPLADQVM 185
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+I F + +L+ +D RL + EL+ ++ + + +++ +V+ Q+ K+Q+E+ L
Sbjct: 186 PHLKIDFARKQQILEELDPSRRLERVFELLLGEIEIVSIEKRVKGRVKEQMEKNQREYYL 245
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+Q++AI +E+G DD + + L+ ++++ M + V+KE+++L+ MQP YT
Sbjct: 246 NEQVKAINKEMGREDDPQAEAQELDSQLEAKIMSDENRERVRKEIKKLRTMQPSSAEYTV 305
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + DLPW ++ +++K A++ LD DH+GL + K+RI+EYLAV+ L +G
Sbjct: 306 VRNYVDWVLDLPWGNIKDDTGVNIKEARKILDEDHFGLEKPKERILEYLAVQSLVESMKG 365
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LCFVGPPGVGKTS+A SIA ++ R+F+R+SLGGV+DEA+IRGHRRTY+G+MPG++I
Sbjct: 366 PILCFVGPPGVGKTSIAKSIARSMDREFLRLSLGGVRDEAEIRGHRRTYVGAMPGKIIQS 425
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
LKRV NPV+ LDE+DK +D RGDP++ALLEVLDPEQN FNDHYL++ +DLSKV F+
Sbjct: 426 LKRVKHNNPVICLDEVDKMSADFRGDPSAALLEVLDPEQNYAFNDHYLDLDYDLSKVFFI 485
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
TAN IP PL DRME+I LPGY EK+ IA L+P+ L+QHGL +E ++ + +
Sbjct: 486 TTANNLDGIPLPLQDRMEIIRLPGYLENEKVEIAKGFLVPKQLEQHGLKTENIKFSDNAI 545
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+++ YTRE+GVRN+ER +A++ R A+KV E+ K VH
Sbjct: 546 LDIVRYYTRESGVRNMEREIASICRKTAMKVVEENDR-----DKVVH------------- 587
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
V + LEK LG +F E E A G+
Sbjct: 588 -----------------------------VTKQGLEKFLGVTKFSYGE-CESEAQVGVCN 617
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ VE M GKG++ +TG+LGDV++ESA+ AL+++RAR+ L L
Sbjct: 618 GLAWTQLGGEMLLVEVALMPGKGKVEITGKLGDVMQESARAALSYIRARSDLLGLKP--- 674
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + DIHIH P GA PKDGPSAG+TL TAL+S VR D AMTGE+TLRG VLP
Sbjct: 675 -DFYKRVDIHIHVPDGATPKDGPSAGITLTTALISALLNIPVRHDLAMTGEITLRGRVLP 733
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG- 819
+GG+++K+LAAHR IK VI+P N K+L +VP +L LEII K M++V+++A E G
Sbjct: 734 IGGLREKLLAAHRGLIKTVIIPSENEKNLKDVPKDILKDLEIIPVKTMDEVIDRALESGV 793
Query: 820 ----CP 821
CP
Sbjct: 794 ETILCP 799
>gi|257483813|ref|ZP_05637854.1| ATP-dependent protease La [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|422683346|ref|ZP_16741607.1| ATP-dependent protease La [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|331012681|gb|EGH92737.1| ATP-dependent protease La [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
Length = 798
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 330/777 (42%), Positives = 460/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YNVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALTKATAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL +Q + +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEIQFDDEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKAV-------------------------------- 552
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
H + F + V MLE LG +F AE+ G
Sbjct: 553 -------------KEHAMEKRFSVQ----VTAEMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|398938377|ref|ZP_10667780.1| ATP-dependent protease La [Pseudomonas sp. GM41(2012)]
gi|398165925|gb|EJM54035.1| ATP-dependent protease La [Pseudomonas sp. GM41(2012)]
Length = 798
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 327/761 (42%), Positives = 454/761 (59%), Gaps = 80/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQF- 122
P G V V++EG R +V+ S + A +S ++ +++ + E + +L QF
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID--EVDAPERESEVFVRSLLAQFE 135
Query: 123 ------KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
K E++S L + G +L D A + E++ +L+
Sbjct: 136 QYVQLGKKVPAEVLSSLNSIDEPG-------------RLVDTMAAHMALKIEQKQEILEI 182
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 183 IDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDE 242
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+++ L++++ +AG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 243 GHNEIEELKKRIDAAGLPKDALAKAQGELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KA 301
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSL
Sbjct: 302 QSKVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSL 361
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
A SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEI
Sbjct: 362 AESIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEI 421
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDR
Sbjct: 422 DKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDR 480
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR L
Sbjct: 481 MEVIRLPGYTEDEKINIAVKYLSPKQITANGLKKGELEFDAEAIRDIIRYYTREAGVRGL 540
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER +A + R A H
Sbjct: 541 ERQIAKVCRKAV---------------------------------------------KEH 555
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
+ F + V MLE LG +F AE G GL WT GGE+ +EA
Sbjct: 556 AMEKRFSVK----VTAEMLEHFLGVRKF-RYGLAESQDQIGQVTGLAWTQVGGELLTIEA 610
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P G
Sbjct: 611 AVVPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEG 666
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GI
Sbjct: 667 ATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGI 726
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
K VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 727 KTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|336114568|ref|YP_004569335.1| ATP-dependent protease La [Bacillus coagulans 2-6]
gi|335367998|gb|AEH53949.1| ATP-dependent protease La [Bacillus coagulans 2-6]
Length = 733
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 305/753 (40%), Positives = 459/753 (60%), Gaps = 69/753 (9%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T V++EG+ R + GT+Y+ + + + E+ D + AL R T +E
Sbjct: 44 TIRVLVEGVRRAKIVSFEDEGTFYSVEVETFD------ERFLPDAETEALMR----TMLE 93
Query: 129 LIS-VLEQKQKTGGRT-KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKA 186
+ + Q +K G T + + + K ADI + + ++ +L+++D+K R+ K
Sbjct: 94 FFNQYISQSKKISGETFQAVSDMEDGGKAADIIASHLPLRLPQKQDILETIDIKERIRKL 153
Query: 187 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALER 246
L+ +++ ++I+Q+V+ + ++QKE+ LR+QM+AI++ELGD + ++ L
Sbjct: 154 IGLIKNEQDILQLEKEISQQVKKSMERTQKEYYLREQMKAIQKELGDKEGKTAEVHELRE 213
Query: 247 KMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKA 306
K+ +AGMP ++ KEL R +K+ R YL+ + LPW A+E+ DL++
Sbjct: 214 KILNAGMPEHVANTAFKELDRYEKIPAASSESAVIRNYLDWLITLPWSNATED-DLNVAK 272
Query: 307 AKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGR 366
A++ L+ DHYGL +VK+R++EYLAV++L +GP+LC GPPGVGKTSLA SIA +LGR
Sbjct: 273 AEKILNEDHYGLEKVKERVLEYLAVQQLTRSIKGPILCLAGPPGVGKTSLARSIAKSLGR 332
Query: 367 KFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGD 426
KF+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV LLDEIDK SD RGD
Sbjct: 333 KFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGTINPVFLLDEIDKMASDFRGD 392
Query: 427 PASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYT 486
P++A+LEVLDPEQN F+DH++ P+DLSKV+F+ATAN +P PL DRME+I + GYT
Sbjct: 393 PSAAMLEVLDPEQNHAFSDHFIEEPYDLSKVMFIATANDLSAVPGPLRDRMEIISISGYT 452
Query: 487 PEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARA 546
EK+ IA HL+P+ + ++GL L++ ++L+++RYTREAGVR LER LA + R
Sbjct: 453 ELEKIEIAKSHLLPKQIKENGLARNQLRVDAEALRLIVRRYTREAGVRGLERRLAEVCRK 512
Query: 547 AAVKVAEQEQEQALPSSKD-VHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRIT 605
A + ++++ S+K+ V LG PL AE+E +V
Sbjct: 513 TAKVIVSGKRKRVTVSAKNIVDFLGKPLFH---YGQAEMEDQV----------------- 552
Query: 606 SPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGEL 665
G++ GL +T GG+ +E + GKG+L
Sbjct: 553 -------------------------------GVATGLAYTTVGGDTLQIEVSLSPGKGKL 581
Query: 666 HLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSA 725
LTG+LGDV+KESAQ A ++VR++A L L + + DIHIH P GAVPKDGPSA
Sbjct: 582 VLTGKLGDVMKESAQTAFSFVRSKAETLGLAP----DFHEKYDIHIHVPEGAVPKDGPSA 637
Query: 726 GVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERN 785
G+T+ TAL+S ++ V + MTGE+TLRG VLP+GG+K+K L AHR G+K++I+P+ N
Sbjct: 638 GITIATALISALTKHAVHKEVGMTGEITLRGRVLPIGGLKEKSLGAHRAGLKKIIIPKEN 697
Query: 786 LKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
+DL ++P +V L M++V+E A G
Sbjct: 698 ERDLDDIPESVRGDLHFYPVTHMDEVIEIAIAG 730
>gi|268592034|ref|ZP_06126255.1| ATP-dependent protease La [Providencia rettgeri DSM 1131]
gi|291312426|gb|EFE52879.1| ATP-dependent protease La [Providencia rettgeri DSM 1131]
Length = 812
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 329/784 (41%), Positives = 459/784 (58%), Gaps = 104/784 (13%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI------------------------SSL 99
P G V V++EGL R + L+ G Y+ A+ SS
Sbjct: 84 PDGTVK--VLVEGLRRARITSLTDNGEYFLAQAEYLAAEQNNESEHAAYDEATAGSQSSD 141
Query: 100 EMTKIEMEQ-----VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHK 154
+ + E E V Q +I L+++ + + +EQ Q + K
Sbjct: 142 ALDEKENEVLYRTIVSQFESYIKLNKKIPPEVLTALHAIEQDQ--------------LDK 187
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LAD + + ++ +L+ ++ R+ +++ + ++V ++I +V+ Q+ KS
Sbjct: 188 LADTIASHMPLKLADKQRVLEMANIAERVEFLMAMMESETELLQVEKRIRNRVKKQMEKS 247
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
Q+E+ L +QM+AI++ELG+ DD D+ +L+RK++ A MP + + EL++LK M P
Sbjct: 248 QREYYLNEQMKAIQKELGEMDDAPDEYESLKRKIEEAKMPKEAQEKAEAELQKLKMMSPM 307
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
T R Y++ + +PW K S ++ DL A+E LD+DHYGL RVK RI+EYLAV+
Sbjct: 308 SAEATVVRSYIDWMVQVPWHKRS-KVKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSR 366
Query: 335 KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
+GP+LC VGPPGVGKTSL SIA A GR++ R++LGGV+DEA+IRGHRRTYIGSMP
Sbjct: 367 VSKIKGPILCLVGPPGVGKTSLGQSIAKATGRQYTRMALGGVRDEAEIRGHRRTYIGSMP 426
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
G+LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN FNDHYL V +DL
Sbjct: 427 GKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNIAFNDHYLEVDYDL 486
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
S V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA +HL+ + ++++ L L
Sbjct: 487 SDVMFVATSN-SMNIPAPLLDRMEVIRLSGYTEDEKLNIAKKHLLSKQIERNALKKNELT 545
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLL 574
I ++ + +I+ YTREAGVR LER ++ L R A +AL L+
Sbjct: 546 IDDSALMSIIRYYTREAGVRGLEREISKLCRKAV---------KAL------------LM 584
Query: 575 DNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AER 632
D +L + ++ L+ LG RFD +A R
Sbjct: 585 DKKLKH---------------------------IEINADNLKDYLGVRRFDYGQADTENR 617
Query: 633 VAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATD 692
V G GL WT GG++ +E + GKG+L TG LG+V++ES Q ALT VRARA
Sbjct: 618 V---GQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQTALTVVRARAEK 674
Query: 693 LQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEM 752
L + + + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+
Sbjct: 675 LGI----NSDFYEKRDIHVHVPEGATPKDGPSAGIAMSTALVSCLTGNPVRADVAMTGEI 730
Query: 753 TLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
TLRGLV P+GG+K+K+LAAHR GIK V++P+ N +DL E+P V+A LEI K +E+VL
Sbjct: 731 TLRGLVFPIGGLKEKLLAAHRGGIKTVLIPKENERDLEEIPQNVIADLEIHPVKTIEEVL 790
Query: 813 EQAF 816
A
Sbjct: 791 SLAL 794
>gi|114321435|ref|YP_743118.1| Lon-A peptidase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227829|gb|ABI57628.1| ATP-dependent proteinase [Alkalilimnicola ehrlichii MLHE-1]
Length = 816
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/762 (43%), Positives = 461/762 (60%), Gaps = 76/762 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI---------SSLEMTKIEMEQVEQDPD 114
P G V V++EG+ R + +L R Y+ A++ + EM + +
Sbjct: 91 PDGTVK--VLVEGVERARLVDLVERDQYFAAQVVVVAEEEAPTDREMEVLMRSAMNHFDQ 148
Query: 115 FIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVML 174
++ L+++ E++S L+ ++ G +LAD A + EE+ +L
Sbjct: 149 YVKLNKKVPP---EILSSLQNIEEPG-------------RLADTIAAHMALKVEEKQHVL 192
Query: 175 DSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDN 234
+ D++ RL L++ L +++ ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+
Sbjct: 193 EIEDVRERLEHLMSLIEAELDILQIEKRIRGRVKQQMEKSQREYYLNEQMKAIQKELGEL 252
Query: 235 DDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWE 294
+D ++ LERK++ +GMP + + EL +LK M P T R YL+ + D+PW+
Sbjct: 253 EDVPNETEDLERKIEESGMPKEAAEKAKAELNKLKMMSPMSAEATVVRNYLDWLVDVPWK 312
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKT 354
K S + DLK A+E LD+DHYGL +VK+RI+EYLAV++ +GP+LC VGPPGVGKT
Sbjct: 313 KRSR-VRKDLKHAEEVLDADHYGLEKVKERILEYLAVQQRVRKVKGPILCLVGPPGVGKT 371
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
SL SIA A RKF R+SLGGV+DEA+IRGHRRTYIGS+PG+++ L +VG NP+ LLD
Sbjct: 372 SLGQSIARATNRKFTRMSLGGVRDEAEIRGHRRTYIGSLPGKIVQNLAKVGTRNPLFLLD 431
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
EIDK D RGDPASALLEVLDPEQN TF DHYL V FDLS V+FVATAN IP PLL
Sbjct: 432 EIDKMAMDFRGDPASALLEVLDPEQNSTFADHYLEVEFDLSDVMFVATANTMN-IPAPLL 490
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRMEVI LPGYT +EK+ IA R+L+ + + +G+ L++ + ++ +I+ YTREAGVR
Sbjct: 491 DRMEVIRLPGYTEDEKINIAERYLLAKQMKANGIRKSELEVKQTAIRDIIRYYTREAGVR 550
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGES 594
NLER LA + R ++ P SK +R ADG
Sbjct: 551 NLERELAKICRKVV-------KDLVSPDSK----------TSRDADGK------------ 581
Query: 595 THEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFV 654
+VV L+K LG RF AE G GL WT GGE+ +
Sbjct: 582 -------------VVVSARNLDKYLGVRRF-RYGVAEENDQVGQVTGLAWTEVGGELLTI 627
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFP 714
E+ + GKG++ TGQLGDV+KES Q A T VR+RA L L E Q +DIHIH P
Sbjct: 628 ESAVVPGKGKVTHTGQLGDVMKESIQAATTVVRSRADRLGLDPE----FHQNKDIHIHVP 683
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
GA+PKDGPSAG+ + TALVS + V+A AMTGE+TLRG VLP+GG+K+K+LAA R
Sbjct: 684 EGAIPKDGPSAGIGMCTALVSALTGIPVKASVAMTGEITLRGEVLPIGGLKEKLLAALRG 743
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
GIK V++PE N KDL E+P + + L+II + +++VL+ A
Sbjct: 744 GIKTVLIPEENRKDLQEIPKNIKSRLKIIPVRWIDEVLDVAL 785
>gi|119774363|ref|YP_927103.1| endopeptidase La [Shewanella amazonensis SB2B]
gi|119766863|gb|ABL99433.1| Lon-A peptidase. Serine peptidase. MEROPS family S16 [Shewanella
amazonensis SB2B]
Length = 785
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 325/764 (42%), Positives = 461/764 (60%), Gaps = 85/764 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVE--------QDPDF 115
P G V V++EG R V + ++ RI L +E ++ E Q +
Sbjct: 84 PDGTVK--VLVEGGRRARVARYTQEEPFFIGRIEELPSAPLEDKEEEVLVRSAIAQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + +S +++ + LAD A + E++ +L+
Sbjct: 142 IKLNKKIPPEVLTSMSGIDEAAR----------------LADTMAAHMPLKLEDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
V++ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELGD D
Sbjct: 186 MVNVGERLEYLMAMMEGEIDLLQVEKRIRSRVKKQMEKSQREYYLNEQMKAIQKELGDLD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
+ D+ L RK++ A MP++ Q EL +L+ M P T R Y++ + +PW +
Sbjct: 246 EGHDEFETLNRKIEEAKMPADAKDKAQAELNKLRMMSPMSAEATVVRSYVDWMTSVPWFE 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ I DL A++ L++DHYGL +VK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-IKRDLSKAEQVLNADHYGLEKVKERILEYLAVQTRVKQLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG++I + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKIIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNATFNDHYLEVDYDLSDVMFVATSN-SMDIPGPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++GL + + + + + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQVERNGLKPQEISVDDGAILGIIRYYTREAGVRA 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ + R ++ L D A ++V GE+
Sbjct: 544 LERELSKICRKVVKQI--------------------------LLDKAVKHVDVT--GEN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
L+ LG R D AE G GL WT GG++ +E
Sbjct: 575 -------------------LKSFLGVQRH-DYGKAESNNQVGQVTGLAWTQVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHF 713
AT++ GKG+L TG LGDV++ES Q A+T VRARA L G+N + RDIH+H
Sbjct: 615 ATSVAGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQL------GINPDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGAAMCTALVSTLTGNPVRADVAMTGEITLRGEVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
GIK V++P+ N +DL E+PA V+A L+I + +++VL+ A E
Sbjct: 729 GGIKHVLIPKENERDLEEIPANVVADLQIHPVRWVDEVLKLALE 772
>gi|398840799|ref|ZP_10598031.1| ATP-dependent protease La [Pseudomonas sp. GM102]
gi|398904001|ref|ZP_10652023.1| ATP-dependent protease La [Pseudomonas sp. GM50]
gi|398109811|gb|EJL99727.1| ATP-dependent protease La [Pseudomonas sp. GM102]
gi|398176430|gb|EJM64149.1| ATP-dependent protease La [Pseudomonas sp. GM50]
Length = 798
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 327/761 (42%), Positives = 454/761 (59%), Gaps = 80/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQF- 122
P G V V++EG R +V+ S + A +S ++ +++ + E + +L QF
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID--EVDAPERESEVFVRSLLAQFE 135
Query: 123 ------KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
K E++S L + G +L D A + E++ +L+
Sbjct: 136 QYVQLGKKVPAEVLSSLNSIDEPG-------------RLVDTMAAHMALKIEQKQEILEI 182
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 183 IDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDE 242
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+++ L++++ +AG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 243 GHNEIEELKKRIDAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KA 301
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSL
Sbjct: 302 QSKVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSL 361
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
A SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEI
Sbjct: 362 AESIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEI 421
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDR
Sbjct: 422 DKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDR 480
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR L
Sbjct: 481 MEVIRLPGYTEDEKINIAVKYLSPKQITANGLKKGELEFDAEAIRDIIRYYTREAGVRGL 540
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER +A + R A H
Sbjct: 541 ERQIAKVCRKAV---------------------------------------------KEH 555
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
+ F + V MLE LG +F AE G GL WT GGE+ +EA
Sbjct: 556 AMEKRFSVK----VTADMLEHFLGVRKF-RYGLAESQDQIGQVTGLAWTQVGGELLTIEA 610
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P G
Sbjct: 611 AVVPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEG 666
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GI
Sbjct: 667 ATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGI 726
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
K VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 727 KTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|398860150|ref|ZP_10615808.1| ATP-dependent protease La [Pseudomonas sp. GM79]
gi|398235355|gb|EJN21186.1| ATP-dependent protease La [Pseudomonas sp. GM79]
Length = 798
Score = 563 bits (1450), Expect = e-157, Method: Compositional matrix adjust.
Identities = 327/761 (42%), Positives = 454/761 (59%), Gaps = 80/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQF- 122
P G V V++EG R +V+ S + A +S ++ +++ + E + +L QF
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID--EVDAPERESEVFVRSLLAQFE 135
Query: 123 ------KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
K E++S L + G +L D A + E++ +L+
Sbjct: 136 QYVQLGKKVPAEVLSSLNSIDEPG-------------RLVDTMAAHMALKIEQKQEILEI 182
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 183 IDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDE 242
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+++ L++++ +AG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 243 GHNEIEELKKRIDAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KA 301
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSL
Sbjct: 302 QSKVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSL 361
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
A SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEI
Sbjct: 362 AESIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEI 421
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDR
Sbjct: 422 DKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDR 480
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR L
Sbjct: 481 MEVIRLPGYTEDEKINIAVKYLSPKQITANGLKKGELEFDAEAIRDIIRYYTREAGVRGL 540
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER +A + R A H
Sbjct: 541 ERQIAKVCRKAV---------------------------------------------KEH 555
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
+ F + V MLE LG +F AE G GL WT GGE+ +EA
Sbjct: 556 AMEKRFSVK----VTADMLEHFLGVRKF-RYGLAESQDQIGQVTGLAWTQVGGELLTIEA 610
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P G
Sbjct: 611 AVVPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEG 666
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GI
Sbjct: 667 ATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGI 726
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
K VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 727 KTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|256370696|ref|YP_003108521.1| ATP-dependent protease La [Candidatus Sulcia muelleri SMDSEM]
gi|256009488|gb|ACU52848.1| ATP-dependent protease La [Candidatus Sulcia muelleri SMDSEM]
Length = 808
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 311/771 (40%), Positives = 463/771 (60%), Gaps = 74/771 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L L ++ P G T V+L+G RF V ++ Y+ A I L+ K + E
Sbjct: 109 GTVAKILKL---LKMPDGTTT--VILQGQSRFKVTKMIQIEPYFKAEIIYLKDEKPDKE- 162
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FEISF 167
D +++AL K +++L+ + Q + + + FVAS +
Sbjct: 163 ---DKEYLALIDSIKEISIKLV---HENQNLPSESSFAISNIESQSFLINFVASNLNLEI 216
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
+E+ ++L+ +K R + + Q + + +I +V+ ++ + QKE+ L QQ++AI
Sbjct: 217 KEKQIILEYDFVKQRAIETFRFLTLEHQQMILKNEIKSRVKKEMDQQQKEYFLNQQIKAI 276
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
KEELG E ++ ++ K K +KEL + K+ PQ P YT R YLE
Sbjct: 277 KEELG-YLSYEKEIEEMKVKSYKKNWSKETQKQFEKELSKFKRTNPQMPEYTVLRNYLEF 335
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
+ DLPW+ S++ DLK A + L+ DH+GL +VK+RIIEYL+V KLK D R P+LCF G
Sbjct: 336 MLDLPWQTYSKD-SFDLKRAHQILEKDHFGLEKVKERIIEYLSVIKLKGDLRSPILCFYG 394
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL SIASAL RK++RISLGG+ DEA+IRGHR+TYIG+MPGR++ +K+ G
Sbjct: 395 PPGVGKTSLGKSIASALNRKYVRISLGGLNDEAEIRGHRKTYIGAMPGRILQSIKKAGTS 454
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDEIDK G +G+PASA+LEVLDPEQNK F D++L + +DLSKVIF+ATAN
Sbjct: 455 NPVFVLDEIDKLGMGNQGNPASAMLEVLDPEQNKEFYDNFLEMGYDLSKVIFIATANSLY 514
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
PI LLDRMEVI++ GYT EEK+ I+ +HLIP+ L ++GL S+ L + ++ +I+ Y
Sbjct: 515 PIHMALLDRMEVIDMTGYTVEEKIEISKKHLIPKQLKENGLTSKDLILGVKQIEKIIENY 574
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TRE+GVR+LE+ ++ + R AA +A ++ K + R
Sbjct: 575 TRESGVRSLEKKISKIVRYAAKNIAMKK--------KYLKR------------------- 607
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
++ A +E+VLGPP+ + E E PGI GL WT
Sbjct: 608 ----------------------INLAKIEEVLGPPQ--EPEKYEVYKIPGIVTGLAWTMG 643
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQ 705
GGE+ ++E+T ++GKG +TG +G+V+KESA IAL +++A + G+N + +
Sbjct: 644 GGEIIYIESTLLKGKGNFSITGNVGNVMKESATIALKYIKAHHQEF------GINEKMFE 697
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
++HIH P GAVPKDGPSAG+T++T+++S F +K +R AMTGE+TLRG +LPVGG+K
Sbjct: 698 MYNLHIHVPEGAVPKDGPSAGITILTSIISSFFKKAIRPYLAMTGEITLRGKILPVGGIK 757
Query: 766 DKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+KILAA R IK +IL + N KD+ +P A + ++ +++ +V+ +F
Sbjct: 758 EKILAAKRANIKEIILSKDNQKDVFAIPKAYIKGIKFHFIRKIIEVINYSF 808
>gi|440229734|ref|YP_007343527.1| ATP-dependent protease La [Serratia marcescens FGI94]
gi|440051439|gb|AGB81342.1| ATP-dependent protease La [Serratia marcescens FGI94]
Length = 784
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 326/765 (42%), Positives = 459/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ L+ I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLDSPAIDEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVSERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ ++ MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEYEALKRKIDASKMPKEAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPW-T 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKKNELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A +AL L+D +L
Sbjct: 544 LEREISKLCRKAV---------KAL------------LMDKKLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG R D A RV G GL WT GG++
Sbjct: 568 ------------IEINGDNLKDYLGVQRVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGTAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A LEI +++++VLE A +
Sbjct: 729 GGIKTVLIPYENKRDLEEIPDNVIADLEIHPVQKIDEVLEIALQN 773
>gi|417082906|ref|ZP_11951075.1| DNA-binding ATP-dependent protease La [Escherichia coli cloneA_i1]
gi|355353090|gb|EHG02262.1| DNA-binding ATP-dependent protease La [Escherichia coli cloneA_i1]
Length = 784
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EG+ R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGVQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EK IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKRNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 576 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 727 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|333900437|ref|YP_004474310.1| anti-sigma H sporulation factor LonB [Pseudomonas fulva 12-X]
gi|333115702|gb|AEF22216.1| anti-sigma H sporulation factor, LonB [Pseudomonas fulva 12-X]
Length = 798
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 339/774 (43%), Positives = 464/774 (59%), Gaps = 79/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A L L ++ P G V V++EG R +++ Y A + L+ E+E
Sbjct: 68 GTVATVLQL---LKLPDGTVK--VLVEGEQRGEIEQFIEADGYSAAEVQLLD----EVEA 118
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPI---HKLADIFVASF 163
E++ + S L+S EQ + G + +VL I +L D A
Sbjct: 119 PERESEVFTRS---------LLSQFEQYVQLGKKVPAEVLSSLNSIDEPSRLVDTMAAHM 169
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ E++ +L+ VDL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +Q
Sbjct: 170 VLKIEQKQEILEIVDLPARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQ 229
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD+++ ++L L+R++++AG+ + Q EL +LK+M P T R
Sbjct: 230 MKAIQKELGDSEEGHNELDELKRRIENAGLTKEAYGKAQAELNKLKQMSPMSAEATVVRS 289
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
Y++ + ++PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K +GPVL
Sbjct: 290 YIDWLVNVPW-KAQSKVRLDLARAENILDADHYGLEEVKERILEYLAVQKRVKKLKGPVL 348
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSLA SIASA RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +
Sbjct: 349 CLVGPPGVGKTSLAESIASATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTK 408
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
VGV NP+ LLDEIDK G D+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ TA
Sbjct: 409 VGVRNPLFLLDEIDKMGQDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTA 468
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N + IP LLDRMEVI LPGYT +EK+ IA ++L P+ + +GL L+ EA ++ +
Sbjct: 469 N-SMNIPAALLDRMEVIRLPGYTEDEKVNIATKYLAPKQIQANGLKKTELEFEEAAIRDI 527
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTREAGVR+LER +A + R A K A++ K H
Sbjct: 528 IRYYTREAGVRSLERQIAKVCRRAVKKHAKE---------KRFH---------------- 562
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
+VV LE LG R AE+ G GL
Sbjct: 563 ------------------------VVVTADSLEDFLG-VRKHRYGLAEQQDQIGQVTGLA 597
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +EA + GKG L TG LGDV+ ES A T VR+RA L VA D
Sbjct: 598 WTQVGGELLTIEAAVVPGKGNLIKTGSLGDVMVESITAAQTVVRSRAQSLG-VAPD---F 653
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
+ RDIHIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL +GG
Sbjct: 654 YEKRDIHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGG 713
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K+K+LAAHR GIK VI+P+ N++DL E+P + L+I K +++VL+ A +
Sbjct: 714 LKEKLLAAHRGGIKTVIIPQENVRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|320540339|ref|ZP_08039991.1| DNA-binding ATP-dependent protease La [Serratia symbiotica str.
Tucson]
gi|320029659|gb|EFW11686.1| DNA-binding ATP-dependent protease La [Serratia symbiotica str.
Tucson]
Length = 792
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 324/759 (42%), Positives = 454/759 (59%), Gaps = 85/759 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +TA+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRMHITTLSDSGECFTAQAEYLESPAIDEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLASLNSIDDAAR----------------LADTIAAHMPLKLNDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DVPDEHEALKRKLAAAKMPKEAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLLKAQEVLDTDHYGLARVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMSIPGPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EK IA +HL+P+ L+++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKFNIAKQHLLPKQLERNALQQSELVVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + + L+D ++
Sbjct: 544 LEREISKLCRKA---------------------VKTLLMDKKVKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG R D A RV G GL WT GG++
Sbjct: 568 ------------IKINGDNLKDYLGVQRVDYGRADIENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRA A L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRASAEKLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
GIK V++P N +DL E+P V+A LEI +R+++VL
Sbjct: 729 GGIKTVLIPHENKRDLEEIPDNVIADLEIHPVQRIDEVL 767
>gi|398311680|ref|ZP_10515154.1| ATP-dependent protease La [Bacillus mojavensis RO-H-1]
Length = 774
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 289/665 (43%), Positives = 422/665 (63%), Gaps = 55/665 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
++ADI + + +++ +L++ D+K RL+K + ++ + + + +KI Q+V+ + +
Sbjct: 162 RMADIVASHLPLKLKDKQDILETADVKDRLNKVIDFINNEKEVLEIEKKIGQRVKRSMER 221
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+ LR+QM+AI++ELGD + ++ +L K++ AGMP ++ + KEL R +K+
Sbjct: 222 TQKEYYLREQMKAIQKELGDKEGKTGEVQSLTEKIEEAGMPDHVKETALKELNRYEKIPS 281
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
+ R Y++ + LPW +E+ LDLK A+ LD +H+GL +VK+RI+EYLAV+K
Sbjct: 282 SSAESSVIRNYIDWLVALPWTDETED-KLDLKEAEHLLDKEHHGLEKVKERILEYLAVQK 340
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LC GPPGVGKTSLA SIA ++ RKF+RISLGGV+DE++IRGHRRTY+G+M
Sbjct: 341 LTKSLKGPILCLAGPPGVGKTSLAKSIAKSMDRKFVRISLGGVRDESEIRGHRRTYVGAM 400
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I G+K+ G NPV LLDEIDK SD RGDP+SA+LEVLDPEQN TF+DHY+ FD
Sbjct: 401 PGRIIQGMKKAGKLNPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSTFSDHYIEETFD 460
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+F+ATAN IP PL DRME+I + GYT EKL I HL+P+ + +HGL L
Sbjct: 461 LSKVLFIATANNLATIPGPLRDRMEIINIAGYTEVEKLEIVKDHLLPKQIKEHGLKKSNL 520
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
Q+ + + +I+ YTREAGVRNLER LAA+ R AA + +++++ + K++H
Sbjct: 521 QLRDQAILDIIRYYTREAGVRNLERQLAAICRKAAKAIVSEDRKRITVTEKNLHDF---- 576
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
+ + M R+ E ++V
Sbjct: 577 ------------------------------------IGKRMF-------RYGQAETEDQV 593
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G+ GL +T GG+ +E + GKG+L LTG+LGDV++ESAQ A ++VR++ +L
Sbjct: 594 ---GVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEEL 650
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ + + DIHIH P GAVPKDGPSAG+T+ TALVS + + V MTGE+T
Sbjct: 651 GIEP----DFHEKYDIHIHVPEGAVPKDGPSAGITMATALVSALTGREVSRKVGMTGEIT 706
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VLP+GG+K+K L AHR G+ +I P+ N KD+ ++P +V L ILA +++VLE
Sbjct: 707 LRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLE 766
Query: 814 QAFEG 818
A G
Sbjct: 767 HALVG 771
>gi|350566318|ref|ZP_08935003.1| ATP-dependent protease LonB [Peptoniphilus indolicus ATCC 29427]
gi|348662944|gb|EGY79572.1| ATP-dependent protease LonB [Peptoniphilus indolicus ATCC 29427]
Length = 774
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 304/758 (40%), Positives = 455/758 (60%), Gaps = 68/758 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG+ R ++E +Y A + +I+ E E D + + +
Sbjct: 80 PGGVVR--VLVEGVKRAKIEEFFIGDFFYEAAVE-----EIKYESNEDDNQEVLAAMRLI 132
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+E + L+ + G V+ + P L D A + E+ +L+++D RL
Sbjct: 133 EEDLENYTELDSRLIPGLLQSVVDSSSP-ESLVDTSAAYINLDLEKSQDLLETLDPFERL 191
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
+K ++ R ++ + + KI ++V+ ++K Q+E+ L++Q++ I +ELGDN + ED L+
Sbjct: 192 TKFHGILKREIELLSIERKIDKQVKSNMNKVQREYYLKEQLKVIHKELGDNAE-EDTLLE 250
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
E K++ +P + + KE+ RL K+ P P Y+ YL+ I +LPW ++S + ++
Sbjct: 251 YEEKIEDTDLPDYVREKALKEVSRLSKLNPSSPEYSVILTYLDWILELPWNESSADT-VE 309
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L +E LDS+HYGL VK+RI+E++AVR L ++GP+LC VGPPGVGKTS+ASSIA++
Sbjct: 310 LSKVREILDSEHYGLKDVKERILEFMAVRNLTESSKGPILCLVGPPGVGKTSIASSIANS 369
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L ++F+R+SLGG+ DEA+IRGHRRTYIG++PGR+I +K+ NPV LLDEIDK GSD
Sbjct: 370 LSKEFVRMSLGGITDEAEIRGHRRTYIGALPGRVISLMKKAEENNPVFLLDEIDKVGSDF 429
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
+GDPAS LLEVLDPEQN TF D YL +PFDLSKV F+ATAN IP PLLDRMEVI L
Sbjct: 430 KGDPASGLLEVLDPEQNNTFTDRYLELPFDLSKVFFIATANSTSTIPRPLLDRMEVIRLS 489
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYTP+EK +IA R+L+P+ + ++GL ++ + ++ +I YTREAGVR LE+ +A
Sbjct: 490 GYTPQEKFQIAKRYLLPKQIKENGLKKSQIKFTDKAIEDIINYYTREAGVRGLEKEIAKC 549
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A +++ E+ ++
Sbjct: 550 IRKAVLRIVEENKKS--------------------------------------------- 564
Query: 604 ITSPLVVDEAMLEKVLGPPR--FDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRG 661
L V E L + LG + FD + RV G+ GL WT GGE +E+T M G
Sbjct: 565 ----LSVTENNLNQYLGEKKFLFDLVQEKNRV---GVVNGLAWTEVGGETLEIESTVMDG 617
Query: 662 KGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKD 721
G+L LTG+LGDV+KESA A++++ + A L + +E + DIHIH P GAVPKD
Sbjct: 618 SGKLMLTGKLGDVMKESANAAISYIASNAETLNVDSE----FRKKSDIHIHVPEGAVPKD 673
Query: 722 GPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVIL 781
GPSAGV + ++++S + +++++D AMTGE+TL G VLP+GG+K+K+LAA R GIK+V++
Sbjct: 674 GPSAGVAMFSSVLSSLTGRKIKSDVAMTGEITLTGRVLPIGGLKEKLLAAERMGIKKVLI 733
Query: 782 PERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
P N +DL E+ ++ LEI+ + +E F G
Sbjct: 734 PRENERDLKEIDENIVNKLEIVTLNEANEAIEHIFGGN 771
>gi|422299467|ref|ZP_16387034.1| ATP-dependent protease La [Pseudomonas avellanae BPIC 631]
gi|407988621|gb|EKG31113.1| ATP-dependent protease La [Pseudomonas avellanae BPIC 631]
Length = 798
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 464/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRTYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL +Q E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEVQFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKA--------------------------------- 551
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ E T E + ++T+ MLE LG +F AE+ G
Sbjct: 552 ----------VKEHTMEKRFSVQVTA------EMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|345875645|ref|ZP_08827436.1| ATP-dependent protease La [Neisseria weaveri LMG 5135]
gi|417958294|ref|ZP_12601209.1| ATP-dependent protease La [Neisseria weaveri ATCC 51223]
gi|343966952|gb|EGV35203.1| ATP-dependent protease La [Neisseria weaveri ATCC 51223]
gi|343968720|gb|EGV36944.1| ATP-dependent protease La [Neisseria weaveri LMG 5135]
Length = 815
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 335/798 (41%), Positives = 477/798 (59%), Gaps = 73/798 (9%)
Query: 36 GKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTAR 95
G + E+ H G AR L + ++ P G V V++EG+ R + G + A
Sbjct: 61 GIEEPEITDLHTMGTVARVLQV---LKLPDGTVK--VLVEGIRRARAVSVEDTGELFVAD 115
Query: 96 ISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETV-PIH- 153
++ Q+ DF +A L+S EQ K K+ E V IH
Sbjct: 116 TETV-----------QEGDFDGAD--MEALRRTLLSQFEQFAKLN--KKIPTEVVNTIHG 160
Query: 154 -----KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVE 208
+LAD A ++ E++ +L++ D+ R+ ++ L ++V ++I +V+
Sbjct: 161 ITENGRLADTVAAHLQLKLEQRQEILETTDIAERIECLLARLEAELDIMQVEKRIRGRVK 220
Query: 209 GQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRL 268
Q+ KSQ+E+ L +Q++AI++ELG+ +D+ +L ALE++++ AGM + EL++L
Sbjct: 221 RQMEKSQREYYLNEQVKAIQKELGE-EDERGELEALEKQIKEAGMSKEAEEKCLSELKKL 279
Query: 269 KKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEY 328
K M P T R Y++ + +LPW+K S + DL A LD+DHYGL +VK+RI+EY
Sbjct: 280 KMMPPMSAESTVVRNYIDTLLELPWKKKSR-VSKDLAKADLVLDADHYGLEKVKERILEY 338
Query: 329 LAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRT 388
LAV+K +GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DE++IRGHRRT
Sbjct: 339 LAVQKRMDKIKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDESEIRGHRRT 398
Query: 389 YIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYL 448
YIGSMPG+++ + + GV NP+ LLDEIDK GSD RGDPASALLEVLDPEQN +F+DHY
Sbjct: 399 YIGSMPGKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPEQNNSFSDHYA 458
Query: 449 NVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGL 508
V +DLS V+F+AT+N IPP LLDRME+I L GYT +EK+ IAM++L+P+ + ++G+
Sbjct: 459 EVDYDLSDVMFIATSNSLN-IPPALLDRMEIIRLSGYTEDEKINIAMQYLVPKQMKRNGV 517
Query: 509 GSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVA-EQEQEQALPSSKDVH 567
L I E+ V+ +I+ YTREAGVR+L+R +A + R +K+ EQ+++ A P+
Sbjct: 518 KEGELVIDESAVRGIIRYYTREAGVRSLDREIAKICRKVVMKITLEQDKKAAAPAR---- 573
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDR 627
RL + TH + VD L LG RF D
Sbjct: 574 --------GRL--------------KKTHVIK----------VDADNLHDYLGVRRF-DY 600
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
AE G GL WT GGE+ VEA A++GKG + TGQLGDV+KES A + VR
Sbjct: 601 GVAEDENRIGQVTGLAWTEVGGELLTVEAVALQGKGTIQCTGQLGDVMKESVSAAWSVVR 660
Query: 688 ARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTA 747
+RA + L + + RDIH+H P GA PKDGPSAG+ + A+VS F++ VRAD A
Sbjct: 661 SRAQAVGLAP----DFYEKRDIHVHVPEGATPKDGPSAGIAMTLAMVSAFTKIPVRADVA 716
Query: 748 MTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKR 807
MTGE+TLRG VL +GG+K+K+LAA R GIK V++P N+KDL E+P V L I K
Sbjct: 717 MTGEITLRGEVLAIGGLKEKLLAALRGGIKHVLIPNDNVKDLEEIPDNVKEGLTIHPVKW 776
Query: 808 MEDVLEQAFEGGC-PWRQ 824
+++VL E PW++
Sbjct: 777 IDEVLSLGLEYQPEPWQE 794
>gi|422650229|ref|ZP_16713035.1| ATP-dependent protease La [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330963318|gb|EGH63578.1| ATP-dependent protease La [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 798
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 464/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRTYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL +Q E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEVQFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKA--------------------------------- 551
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ E T E + ++T+ MLE LG +F AE+ G
Sbjct: 552 ----------VKEHTMEKRFSVQVTA------EMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|270156949|ref|ZP_06185606.1| ATP-dependent protease La [Legionella longbeachae D-4968]
gi|289164627|ref|YP_003454765.1| ATP-dependent protease La [Legionella longbeachae NSW150]
gi|269988974|gb|EEZ95228.1| ATP-dependent protease La [Legionella longbeachae D-4968]
gi|288857800|emb|CBJ11644.1| putative ATP-dependent protease La [Legionella longbeachae NSW150]
Length = 813
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 325/764 (42%), Positives = 465/764 (60%), Gaps = 74/764 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +E Y A +LE+ + E + Q+PD L R
Sbjct: 91 PDGTVK--VLVEGEKRAKAKEYHQTEGYLEA---ALEVMEDENAAI-QEPDIGILMRS-- 142
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ K + +VL I +LAD A + +++ +L+++D
Sbjct: 143 -----LMSQFEQYIKLNKKIPPEVLSPLAGIEEPGRLADTIAAHLTLKIDDKQDLLETLD 197
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL + ++ + + V +++ +V+ Q+ KSQ+E+ L +QM+AI++ELG+ ++
Sbjct: 198 VGTRLERLMSAIENEIDLLHVEKRVRGRVKRQMEKSQREYYLNEQMKAIQKELGELGEEG 257
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ LE+ + AGMP + EL +LK M P T R YL+ + ++PW+K ++
Sbjct: 258 NEIEQLEKSINKAGMPKEAKEKSLAELHKLKMMSPMSAEATVIRNYLDWMLEVPWKKRTK 317
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
I DL A++ LD +HYGL +VK+RIIEYLAV++ +GP+LC VGPPGVGKTSL
Sbjct: 318 -IQFDLLKAEKLLDKEHYGLEQVKKRIIEYLAVQQRVKRLKGPILCLVGPPGVGKTSLGQ 376
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA+A GR FIRI+LGGV+DEA+IRGHRRTYIGSMPG++I L + GV NP+++LDE+DK
Sbjct: 377 SIANATGRTFIRIALGGVRDEAEIRGHRRTYIGSMPGKIIQKLCKAGVKNPLIMLDEVDK 436
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
D RGDPA+ALLEVLDPEQN TFNDHYL V +DLS V+F+ATAN + IP PLLDRME
Sbjct: 437 MAMDFRGDPAAALLEVLDPEQNHTFNDHYLEVDYDLSDVMFIATANSLE-IPAPLLDRME 495
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI L GYT +EK+ IA R+L+P+ + +GL ++ + I E ++ +I+ YTREAGVRNLER
Sbjct: 496 VIRLAGYTEDEKVSIAERYLVPKQIVLNGLNNDEIHISEGAIREIIRHYTREAGVRNLER 555
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
++A++ R ++ S+K + ++ L +
Sbjct: 556 DIASVCRKVVKEIL---------SNKKIKKMAVSLNN----------------------- 583
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
+EK LG ++ AE+ G GL WT+ GGE+ +EA+
Sbjct: 584 ----------------IEKYLGVKKY-RYGLAEQFDQVGQVTGLAWTSVGGELLTIEASM 626
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
M GKG++ TGQLG+V++ES A+T VR+RA L L+ + D H+H P GA
Sbjct: 627 MPGKGKVTHTGQLGEVMQESIHAAMTVVRSRAKKLGLLD----DFYDKNDFHVHVPEGAT 682
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+ + T LVS+ ++ V+AD AMTGE+TLRG VLP+GG+K+K+LAAHR GIK
Sbjct: 683 PKDGPSAGIGMCTVLVSVVTQIPVKADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKH 742
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
VI+PE N+KDL E+P VL L I + +E VLE A + PW
Sbjct: 743 VIIPEENVKDLEEIPDNVLRKLTIHPVQTIEQVLELALQ-RSPW 785
>gi|296504961|ref|YP_003666661.1| ATP-dependent protease La [Bacillus thuringiensis BMB171]
gi|296326013|gb|ADH08941.1| ATP-dependent protease La [Bacillus thuringiensis BMB171]
Length = 732
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 453/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 40 PNG--TLRVLVEGLHRAEVIEFIEEENVVQVSIKTV------TEEVEDDLEEKALMRTLL 91
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 92 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 149
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 150 QTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 209
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E+I +D
Sbjct: 210 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDI-ID 268
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L++DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 269 LAHSEEILNNDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 328
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 329 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 388
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 389 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 448
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 449 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 508
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A + E+++
Sbjct: 509 CRKVAKIIVTAERKR--------------------------------------------- 523
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+VV E + +LG F + AE+ G++ GL +T GG+ +E + GKG
Sbjct: 524 ----IVVTEKKIVDLLGKHIFRYGQ-AEKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 578
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 579 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 634
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 635 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 694
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 695 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 729
>gi|384099147|ref|ZP_10000247.1| Lon protease [Imtechella halotolerans K1]
gi|383833571|gb|EID73022.1| Lon protease [Imtechella halotolerans K1]
Length = 816
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 319/768 (41%), Positives = 456/768 (59%), Gaps = 69/768 (8%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G AR L R ++ P G VT ++++G RF + E+ T Y TA I + TK +
Sbjct: 105 GTVARIL---RVLKMPDGNVT--IIIQGKKRFEINEIITEKPYLTATIKEVPETKPD--- 156
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FEISF 167
+ +F A+ K A+++I ++ ++ + + FV+S ++
Sbjct: 157 -QGSEEFSAIVESIKDLALQII---KESPNIPSEATFAIKNIESNSFLINFVSSNMNLTV 212
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
E+ +L+ DLK R ++ LQ + + I KV L + Q+E+ L QQM+ I
Sbjct: 213 AEKQQLLEINDLKERALSTLRFMNLELQKLTLKNDIQSKVRYDLDQQQREYFLHQQMKTI 272
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
+EELG E+++ + + + + +H +KEL ++++M PQ Y+ R YL+L
Sbjct: 273 QEELG-GVSYEEEIEEMRERAKKKKWNDKVKEHFEKELAKMQRMNPQVAEYSIQRNYLDL 331
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
DLPW K S++ + DLK A+ LD DHYGL VK+RIIEYLAV KL+ D + P+LC G
Sbjct: 332 YLDLPWNKFSKD-NFDLKRAQRILDRDHYGLEDVKRRIIEYLAVLKLRNDMKSPILCLYG 390
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL SIA ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR+I LK+ G
Sbjct: 391 PPGVGKTSLGKSIAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKAGTS 450
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDEIDK S GDP+SA+LEVLDPEQN F D++L + +DLSKV+FVAT+N
Sbjct: 451 NPVFVLDEIDKLSSSHNGDPSSAMLEVLDPEQNNEFYDNFLEMGYDLSKVMFVATSNSLS 510
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
I P L DRME+I + GYT EEK+ IA RHL+P+ L +HGL SE L I + ++ +++ Y
Sbjct: 511 TIQPALRDRMEIINVTGYTIEEKVEIAKRHLLPKQLKEHGLSSEDLLIGKREMEKIVEGY 570
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEME 587
TRE+GVR LE+ +A + R AA +A +E +S+DV +
Sbjct: 571 TRESGVRGLEKQIAKMVRFAAKSIAMEETYNVKVTSEDVEK------------------- 611
Query: 588 VIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNF 647
VLGP R +R+ E G+ GL WT+
Sbjct: 612 ------------------------------VLGPARL-ERDKYENNEVAGVVTGLAWTSV 640
Query: 648 GGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGR 707
GG++ F+E+ +GKG + +TG LG V+KESA IA+ ++++ A L + E + +
Sbjct: 641 GGDILFIESILSKGKGAMTITGNLGQVMKESATIAMEYIKSNAELLGINPE----IFEKY 696
Query: 708 DIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDK 767
++HIH P GA PKDGPSAG+T++T+LVSLF++KRV+ AMTGE+TLRG VLPVGG+K+K
Sbjct: 697 NVHIHVPEGATPKDGPSAGITMLTSLVSLFTQKRVKKSLAMTGEITLRGKVLPVGGIKEK 756
Query: 768 ILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
ILAA R IK +IL E N KD+ E+ A L L K M +V+E A
Sbjct: 757 ILAAKRARIKEIILSEENRKDVEEIKAEYLKGLTFHYVKEMGEVIELA 804
>gi|62549363|gb|AAX87000.1| ATP-dependent protease [Pseudomonas syringae pv. tabaci]
Length = 798
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 330/777 (42%), Positives = 460/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
+N G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YNVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALTKATAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL +Q + +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEIQFDDEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKAV-------------------------------- 552
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
H + F + V MLE LG +F AE+ G
Sbjct: 553 -------------KEHAMEKRFSVQ----VTAEMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWVDEVLQIALQ 767
>gi|398996368|ref|ZP_10699225.1| ATP-dependent protease La [Pseudomonas sp. GM21]
gi|398126899|gb|EJM16320.1| ATP-dependent protease La [Pseudomonas sp. GM21]
Length = 798
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 327/761 (42%), Positives = 454/761 (59%), Gaps = 80/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQF- 122
P G V V++EG R +V+ S + A +S ++ +++ + E + +L QF
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID--EVDAPERESEVFVRSLLAQFE 135
Query: 123 ------KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
K E++S L + G +L D A + E++ +L+
Sbjct: 136 QYVQLGKKVPAEVLSSLNSIDEPG-------------RLVDTMAAHMALKIEQKQEILEI 182
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 183 IDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDE 242
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+++ L++++ +AG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 243 GHNEIEELKKRIDAAGLPKDALAKAQGELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KA 301
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSL
Sbjct: 302 QSKVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSL 361
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
A SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEI
Sbjct: 362 AESIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEI 421
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDR
Sbjct: 422 DKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDR 480
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR L
Sbjct: 481 MEVIRLPGYTEDEKINIAVKYLSPKQITANGLKKGELEFDAEAIRDIIRYYTREAGVRGL 540
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER +A + R A H
Sbjct: 541 ERQIAKVCRKAV---------------------------------------------KEH 555
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
+ F + V MLE LG +F AE G GL WT GGE+ +EA
Sbjct: 556 AMEKRFSVK----VTAEMLEHFLGVRKF-RYGLAESQDQIGQVTGLAWTQVGGELLTIEA 610
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P G
Sbjct: 611 AVVPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEG 666
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GI
Sbjct: 667 ATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGI 726
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
K VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 727 KTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|398879704|ref|ZP_10634792.1| ATP-dependent protease La [Pseudomonas sp. GM67]
gi|398886632|ref|ZP_10641499.1| ATP-dependent protease La [Pseudomonas sp. GM60]
gi|398188903|gb|EJM76192.1| ATP-dependent protease La [Pseudomonas sp. GM60]
gi|398195848|gb|EJM82875.1| ATP-dependent protease La [Pseudomonas sp. GM67]
Length = 798
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 327/761 (42%), Positives = 454/761 (59%), Gaps = 80/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQF- 122
P G V V++EG R +V+ S + A +S ++ +++ + E + +L QF
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID--EVDAPERESEVFVRSLLAQFE 135
Query: 123 ------KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
K E++S L + G +L D A + E++ +L+
Sbjct: 136 QYVQLGKKVPAEVLSSLNSIDEPG-------------RLVDTMAAHMALKIEQKQEILEI 182
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 183 IDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDE 242
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+++ L++++ +AG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 243 GHNEIEELKKRIDAAGLPKDALAKAQAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KA 301
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSL
Sbjct: 302 QSKVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSL 361
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
A SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEI
Sbjct: 362 AESIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEI 421
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDR
Sbjct: 422 DKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDR 480
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR L
Sbjct: 481 MEVIRLPGYTEDEKINIAVKYLSPKQITANGLKKGELEFDAEAIRDIIRYYTREAGVRGL 540
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER +A + R A H
Sbjct: 541 ERQIAKVCRKAV---------------------------------------------KEH 555
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
+ F + V MLE LG +F AE G GL WT GGE+ +EA
Sbjct: 556 ALEKRFSVK----VTADMLEHFLGVRKF-RYGLAESQDQIGQVTGLAWTQVGGELLTIEA 610
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P G
Sbjct: 611 AVVPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEG 666
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GI
Sbjct: 667 ATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGI 726
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
K VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 727 KTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|373486121|ref|ZP_09576798.1| ATP-dependent protease La [Holophaga foetida DSM 6591]
gi|372012310|gb|EHP12884.1| ATP-dependent protease La [Holophaga foetida DSM 6591]
Length = 807
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/772 (40%), Positives = 470/772 (60%), Gaps = 73/772 (9%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
R ++ P GR+ +V +GL R V+ + + AR+ L ++ VE D AL
Sbjct: 89 RVLKLPDGRIRALV--QGLQRVRVEYFTETDAIFKARVEPLVEPEVSGSGVELD----AL 142
Query: 119 SRQFKATAMELISVLEQKQKTGGRTKVLLETVPIH---KLADIFVASFEISFEEQLVMLD 175
R K T + +++ + + +VL+ + +LAD+ ++ ++ + +L+
Sbjct: 143 MRSVKQTLEKAVALGKNLNQ-----EVLVIAANLDSPGRLADLVASNLDLKSPQLQEVLE 197
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+D RL + EL+ R + + V +KIT + G++ KSQ+++ LRQQ++AI++ELG+ +
Sbjct: 198 IIDPIQRLKRIHELIMREIDLLEVQQKITMEARGEMDKSQRDYYLRQQLKAIQQELGETN 257
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
+ +++ A K+ +P +I + + L++L++M P +R YLE + ++PW
Sbjct: 258 ELAEEIQAFRDKLAKLTVPEDILVEIDRNLKKLERMHPDSSETAVTRTYLEWMTEMPWGI 317
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
SE+ + DLK AK+ LD +H GL ++K R++E+LAVRKL+PD +G +LCFVGPPG GKTS
Sbjct: 318 QSED-NKDLKLAKDTLDEEHDGLEKIKDRLMEFLAVRKLRPDLKGTILCFVGPPGTGKTS 376
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L S+A ALGRKF R+SLGGV DE++IRGHRRTY+G+MPGR++ L +V NPV++LDE
Sbjct: 377 LGKSVAKALGRKFARVSLGGVHDESEIRGHRRTYVGAMPGRIVQALHQVQTMNPVIVLDE 436
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
+DK G D+RGDP++ALLEVLDPEQN TF D+Y+NVP DLS+V+F+ TAN PI P D
Sbjct: 437 VDKIGRDMRGDPSAALLEVLDPEQNHTFRDNYMNVPIDLSQVLFLTTANELDPIQPAFRD 496
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+I L YT EEK+ I+ +HLIPR L+++G+ E + ++ +K +IQ YTRE+G+R
Sbjct: 497 RMEIISLSSYTLEEKISISEKHLIPRQLEKNGVTKEQVAFSKSGLKALIQGYTRESGLRQ 556
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER + ++ R A +VAE+ Q+
Sbjct: 557 LEREIGSVCRKIARRVAEERQK-------------------------------------- 578
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRF--DDREAAERVAAPGISVGLVWTNFGGEVQF 653
+ EA +++++GP + D+R A RV G+ GL WT+ GG+V F
Sbjct: 579 ----------GKFTLAEANIQELMGPLKLLKDERLKAPRV---GVVTGLAWTSTGGDVLF 625
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
VEA M GKG L LTGQLGDV+KESAQ AL+++R+R+ ++ E + Q D+HIHF
Sbjct: 626 VEALKMPGKGGLILTGQLGDVMKESAQAALSYIRSRSDAFEIDPE----VFQKHDLHIHF 681
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA+PKDGPSAG+ + T L+S+ V+ AMTGE+ LRG L +GG+K+K LAA R
Sbjct: 682 PEGAIPKDGPSAGLAIATVLLSVLKGVPVKNTLAMTGEIDLRGEALAIGGLKEKSLAALR 741
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF-EGGCPWRQ 824
GIK +I+P N KDL E+ V A L K +E+V E A + CP ++
Sbjct: 742 VGIKDIIIPFANQKDLEEIAPEVRAKLSFHPVKHVEEVFEMALTKWTCPEKK 793
>gi|422591341|ref|ZP_16665986.1| ATP-dependent protease La [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330878774|gb|EGH12923.1| ATP-dependent protease La [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 798
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/777 (42%), Positives = 464/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRTYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL +Q E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEVQFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKA--------------------------------- 551
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ E T E + ++T+ MLE LG +F AE+ G
Sbjct: 552 ----------VKEHTMEKRFSVQVTA------EMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|398871358|ref|ZP_10626673.1| ATP-dependent protease La [Pseudomonas sp. GM74]
gi|398206299|gb|EJM93066.1| ATP-dependent protease La [Pseudomonas sp. GM74]
Length = 798
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 329/759 (43%), Positives = 456/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S ++ E+E E++ + S
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID----EVEAPERESEVFVRS---- 129
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 130 -----LLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEVEELKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQITANGLKKGELEFDAEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A H +
Sbjct: 543 QIAKVCRKAV---------------------------------------------KEHAL 557
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
F + V MLE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 558 EKRFSVK----VTADMLEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKT 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|399018230|ref|ZP_10720414.1| ATP-dependent protease La [Herbaspirillum sp. CF444]
gi|398101866|gb|EJL92066.1| ATP-dependent protease La [Herbaspirillum sp. CF444]
Length = 802
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 329/762 (43%), Positives = 466/762 (61%), Gaps = 82/762 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEM---TKIEMEQ-----VEQDPDF 115
P G V V++EG R + +S T++ A ++ +E + E+E V+Q +
Sbjct: 85 PDGTVK--VLVEGAQRARIHHISELDTHFVADLTPVESELGDEAEVEAMRRTIVQQFDQY 142
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ L+++ E++S L G +LAD A + E++ V+L+
Sbjct: 143 VKLNKKIPP---EILSSLAGIDDAG-------------RLADTIAAHLPLKLEQKQVILE 186
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
++ R ++ L ++V ++I +V+ Q+ KSQ+E+ L +Q++AI++ELG+ +
Sbjct: 187 IFNVAKRHEHLLGQLEGELDILQVEKRIRGRVKRQMEKSQREYYLNEQVKAIQKELGEGE 246
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D L LE+K+ SA MP + Q ELR+LK M P T R Y++ + LPW+K
Sbjct: 247 DGAD-LEELEKKILSAKMPKEALEKAQSELRKLKLMSPMSAEATVVRNYIDTLVGLPWKK 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ ++ DL A++ L+ DHYGL +VK+RI+EYLAV++ + P+LCFVGPPGVGKTS
Sbjct: 306 KSK-VNNDLPNAEKVLEGDHYGLDKVKERILEYLAVQQRVDKLKAPILCFVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPG+++ L +VGV NP+ LLDE
Sbjct: 365 LGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQSLAKVGVRNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK G D RGDP+SALLEVLDPEQN TF+DHY+ V FDLS V+FVAT+N IPP LLD
Sbjct: 425 IDKLGMDFRGDPSSALLEVLDPEQNHTFSDHYIEVDFDLSDVMFVATSNSFN-IPPALLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EK IA R+L+P+ + +GL + + E+ ++ +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKTSIAQRYLMPKQIKNNGLKEGEISVAESAIRDIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ + R + ++QE+
Sbjct: 544 LEREVSKICRKVVKMLLLKKQEK------------------------------------- 566
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
+V+ T R L+K LG RF D AE+ G VGL WT GG++ +E
Sbjct: 567 -KVTVTSR----------NLDKFLGVRRF-DFGIAEKENQVGQVVGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
A M GKG + TG LGDV+KES + A T VR+RA L + + ++ + RDIHIH P
Sbjct: 615 AVTMPGKGGVIRTGTLGDVMKESIEAARTVVRSRAQKLGIRS----DVFEKRDIHIHVPE 670
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAG+ + TA+VS+F+ VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR G
Sbjct: 671 GATPKDGPSAGIAMTTAMVSVFTGIPVRADVAMTGEITLRGEVLPIGGLKEKLLAAHRGG 730
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
IK V++PE+N+KDL E+P V LEI+ + ++ VLE A E
Sbjct: 731 IKTVLIPEQNVKDLTEIPDNVKNKLEIVPVRWIDKVLEIALE 772
>gi|410092112|ref|ZP_11288652.1| ATP-dependent protease La [Pseudomonas viridiflava UASWS0038]
gi|409760540|gb|EKN45673.1| ATP-dependent protease La [Pseudomonas viridiflava UASWS0038]
Length = 798
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 335/790 (42%), Positives = 468/790 (59%), Gaps = 82/790 (10%)
Query: 33 ASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYY 92
A D ++Q + ++ G A L L ++ P G V V++EG R SV+ +Y
Sbjct: 55 ADDDPDEQAL---YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHY 106
Query: 93 TARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETV 150
A ++ ++ + A R+ + L++ EQ + G + +VL
Sbjct: 107 RAEVALID-------------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLN 153
Query: 151 PIH---KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKV 207
I +L D A + E++ +L+ +DL R+ L+D + ++V ++I +V
Sbjct: 154 SIDEPGRLVDTMAAHMALKIEQKQDILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRV 213
Query: 208 EGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRR 267
+ Q+ +SQ+E+ L +QM+AI++ELGD D+ +++ L++++ +AG+P + EL +
Sbjct: 214 KKQMERSQREYYLNEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALAKATAELNK 273
Query: 268 LKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIE 327
LK+M P T R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+E
Sbjct: 274 LKQMSPMSAEATVVRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILE 332
Query: 328 YLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRR 387
YLAV+K RGPVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRR
Sbjct: 333 YLAVQKRVKKIRGPVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRR 392
Query: 388 TYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHY 447
TYIGSMPGRLI + +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHY
Sbjct: 393 TYIGSMPGRLIQKMTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHY 452
Query: 448 LNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHG 507
L V +DLS V+F+ T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +G
Sbjct: 453 LEVDYDLSDVMFLCTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANG 511
Query: 508 LGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVH 567
L ++ E ++ +I+ YTREAGVR LER +A + R A +E AL VH
Sbjct: 512 LKKGEIEFDEEAIRDIIRYYTREAGVRGLERQIAKVCRKAV-------KEHALEKRFAVH 564
Query: 568 RLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDR 627
V MLE LG +F
Sbjct: 565 ------------------------------------------VTADMLEHFLGVRKF-RY 581
Query: 628 EAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVR 687
AE+ G GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR
Sbjct: 582 GLAEQQDQIGQVTGLAWTQVGGELLTIEAAVVPGKGQLIKTGSLGDVMVESITAAQTVVR 641
Query: 688 ARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTA 747
+RA L + A + + D HIH P GA PKDGPSAGV + TALVS ++ VRAD A
Sbjct: 642 SRARSLGISA----DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVA 697
Query: 748 MTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKR 807
MTGE+TLRG VL +GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K
Sbjct: 698 MTGEITLRGQVLAIGGLKEKLLAAHRGGIKTVIIPEENIRDLKEIPDNIKQDLQIKPVKW 757
Query: 808 MEDVLEQAFE 817
+++VL+ A +
Sbjct: 758 IDEVLQIALQ 767
>gi|30022558|ref|NP_834189.1| ATP-dependent protease La [Bacillus cereus ATCC 14579]
gi|218234766|ref|YP_002369277.1| ATP-dependent protease La 1 [Bacillus cereus B4264]
gi|229048187|ref|ZP_04193756.1| ATP-dependent protease La 1 [Bacillus cereus AH676]
gi|229129762|ref|ZP_04258729.1| ATP-dependent protease La 1 [Bacillus cereus BDRD-Cer4]
gi|229147040|ref|ZP_04275400.1| ATP-dependent protease La 1 [Bacillus cereus BDRD-ST24]
gi|229152672|ref|ZP_04280860.1| ATP-dependent protease La 1 [Bacillus cereus m1550]
gi|423585053|ref|ZP_17561140.1| lon protease [Bacillus cereus VD045]
gi|423640451|ref|ZP_17616069.1| lon protease [Bacillus cereus VD166]
gi|423657422|ref|ZP_17632721.1| lon protease [Bacillus cereus VD200]
gi|29898116|gb|AAP11390.1| ATP-dependent protease La [Bacillus cereus ATCC 14579]
gi|218162723|gb|ACK62715.1| ATP-dependent protease La 1 [Bacillus cereus B4264]
gi|228630818|gb|EEK87459.1| ATP-dependent protease La 1 [Bacillus cereus m1550]
gi|228636428|gb|EEK92898.1| ATP-dependent protease La 1 [Bacillus cereus BDRD-ST24]
gi|228653678|gb|EEL09549.1| ATP-dependent protease La 1 [Bacillus cereus BDRD-Cer4]
gi|228723174|gb|EEL74550.1| ATP-dependent protease La 1 [Bacillus cereus AH676]
gi|401234365|gb|EJR40846.1| lon protease [Bacillus cereus VD045]
gi|401280946|gb|EJR86862.1| lon protease [Bacillus cereus VD166]
gi|401289317|gb|EJR95034.1| lon protease [Bacillus cereus VD200]
Length = 776
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 453/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVIEFIEEENVVQVSIKTV------TEEVEDDLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 QTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E+I +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDI-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L++DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNNDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A + E+++
Sbjct: 553 CRKVAKIIVTAERKR--------------------------------------------- 567
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+VV E + +LG F + AE+ G++ GL +T GG+ +E + GKG
Sbjct: 568 ----IVVTEKKIVDLLGKHIFRYGQ-AEKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|15800169|ref|NP_286181.1| DNA-binding ATP-dependent protease La [Escherichia coli O157:H7
str. EDL933]
gi|12513301|gb|AAG54789.1|AE005223_4 DNA-binding, ATP-dependent protease La; heat shock K-protein
[Escherichia coli O157:H7 str. EDL933]
Length = 799
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 99 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 156
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 157 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 200
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 201 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 260
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 261 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 319
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E L++DHYGL RVK RI+EYLAV+ +GP+LC V PPGVGKTS
Sbjct: 320 ARSKVKKDLRQAQEILNTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVXPPGVGKTS 379
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 380 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 439
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 440 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 498
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 499 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 558
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 559 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 590
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
H+ LG RFD A RV G GL WT GG++
Sbjct: 591 HD--------------------YLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 627
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 628 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHV 681
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAA
Sbjct: 682 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAA 741
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 742 HRGGIKTVLIPFENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 788
>gi|418939668|ref|ZP_13493058.1| anti-sigma H sporulation factor, LonB [Rhizobium sp. PDO1-076]
gi|375053609|gb|EHS49998.1| anti-sigma H sporulation factor, LonB [Rhizobium sp. PDO1-076]
Length = 805
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 319/796 (40%), Positives = 457/796 (57%), Gaps = 87/796 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ ASD I+ G A L L ++ P G V V++EG R ++ + R
Sbjct: 56 TQINASDDDPAPSAIY--EVGTVANVLQL---LKLPDGTVK--VLIEGRARAKIETYTGR 108
Query: 89 GTYY--TARI------SSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTG 140
YY TA I ++E+ + V + +++ L+++ + S +E
Sbjct: 109 EDYYEATAHILAEPEEDAVEIEALSRSVVSEFENYVKLNKKISPEVVGAASQIED----- 163
Query: 141 GRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVA 200
KLAD + I E+ ML++V +K RL KA ++ + ++V
Sbjct: 164 -----------YSKLADTVASHLSIKITEKQEMLETVSVKTRLEKALGFMEGEISVLQVE 212
Query: 201 EKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKH 260
++I +V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D++ LE ++ + +
Sbjct: 213 KRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDGEDGRDEMAELEERIAKTKLSKEAKEK 272
Query: 261 VQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVR 320
EL++L+ M P T R YL+ + LPW K S+ + +DL A++ LD DH+GL +
Sbjct: 273 ADAELKKLRHMSPMSAEATVVRNYLDWLLGLPWNKKSK-VKVDLNLAEKVLDEDHFGLDK 331
Query: 321 VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEA 380
VK+RI+EYLAV+ +GP+LC VGPPGVGKTSLA SIA A GR+++R++LGGV+DEA
Sbjct: 332 VKERIVEYLAVQARATKLKGPILCLVGPPGVGKTSLAKSIAKATGREYVRMALGGVRDEA 391
Query: 381 DIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQN 440
+IRGHRRTYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN
Sbjct: 392 EIRGHRRTYIGSMPGKIVQSMKKAKKSNPLFLLDEIDKLGQDYRGDPSSALLEVLDPEQN 451
Query: 441 KTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIP 500
TF DHYL V +DLS V+FV TAN IP PL+DRME+I + GYT +EKL IA RHL+P
Sbjct: 452 STFMDHYLEVEYDLSNVMFVTTANTLN-IPGPLMDRMEIIRIAGYTEDEKLEIAKRHLLP 510
Query: 501 RVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQAL 560
+ + +H L E + ++ + +IQ+YTREAGVR+ ER L LAR A ++ +
Sbjct: 511 KAIKEHALRPEEFSVADSAIMAIIQQYTREAGVRSFERELMKLARKAVTEIIKG------ 564
Query: 561 PSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLG 620
++TS + V+ + LG
Sbjct: 565 ------------------------------------------KVTS-VAVNGDNINDYLG 581
Query: 621 PPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQ 680
PR+ E AE G+ GL WT GGE+ +E M GKG + +TG L +V+KES
Sbjct: 582 VPRYRHGE-AEGEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLKEVMKESIS 640
Query: 681 IALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRK 740
A ++VR+RA D + DIH+H P GA PKDGPSAGV + TA+VS+ +
Sbjct: 641 AAASYVRSRAVDFGIEPPR----FDKSDIHVHVPEGATPKDGPSAGVAMATAIVSIMTGI 696
Query: 741 RVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASL 800
V D AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL ++P V +L
Sbjct: 697 PVNKDVAMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPDNVKNNL 756
Query: 801 EIILAKRMEDVLEQAF 816
EI+ RM +V+ A
Sbjct: 757 EIVPVSRMGEVIRHAL 772
>gi|347753756|ref|YP_004861320.1| ATP-dependent proteinase, serine peptidase, MEROPS family S16
[Candidatus Chloracidobacterium thermophilum B]
gi|347586274|gb|AEP10804.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Candidatus Chloracidobacterium thermophilum B]
Length = 820
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 308/664 (46%), Positives = 436/664 (65%), Gaps = 52/664 (7%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD + +IS EE+ +L++V L RL + ++ D L+ ++V I +V+ Q+ +
Sbjct: 167 RLADSVASHLKISVEEKQKLLETVALSDRLLRLVDIFDIELEKLQVDRIIQGRVKKQMER 226
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
S +EF L ++++AI +ELG D+ + L+R++++A +P++ + ELRRL++M
Sbjct: 227 SHREFYLSEKIKAIHKELG-RKDERSEFEELKRRVEAANLPADAHEKAMSELRRLEQMPL 285
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
SR Y+E + +PW + SEE + DL+AA++ LD+DHYGL ++K RI+E+LAVR+
Sbjct: 286 MSAEAAVSRNYVEWLISVPWHERSEE-NRDLQAAQQILDADHYGLEKIKDRILEFLAVRQ 344
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L G +LCFVGPPGVGKTSL SIA A GRKF+R+SLGGV+DEA+IRGHRRTYIGS+
Sbjct: 345 LVNRPPGSILCFVGPPGVGKTSLGKSIARATGRKFVRLSLGGVRDEAEIRGHRRTYIGSL 404
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSD-VRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
PG++I +K+ G NP+MLLDE+DK +D RGDPA+ALLEVLDPEQN TF DHYL+V +
Sbjct: 405 PGQIIQMMKKAGTINPLMLLDEVDKLTADHYRGDPAAALLEVLDPEQNDTFRDHYLDVEY 464
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLS+V+F+ATAN IPP L DR+E+I L GYT EKL IA RHLIP+ ++HGL
Sbjct: 465 DLSQVMFIATANVLHTIPPALRDRLEIIRLSGYTEREKLEIARRHLIPKQREKHGLRETQ 524
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSP 572
+ E + +IQ YTREAG+RN+ER++A + R A K+ L +P
Sbjct: 525 IDFTEDALVSIIQNYTREAGMRNMERDVATICRKVARKL-----------------LLTP 567
Query: 573 LLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAER 632
++ AD +R T + A L + LGP R+ ER
Sbjct: 568 --ESERAD---------------------YRAT----IRAADLPEYLGPIRYQPARLKER 600
Query: 633 VAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATD 692
+ G++ GL WT GGEV FVE T + G+G++ LTG+LGDV++ESA+ A+T+VRARAT+
Sbjct: 601 -SEVGMATGLAWTEVGGEVLFVETTLLPGRGQIILTGKLGDVMQESARAAMTYVRARATE 659
Query: 693 LQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEM 752
L + + + +DIHIH P GA+PKDGPSAG+T+ TALVS + VR D AMTGE+
Sbjct: 660 LGIAP----DFYRRQDIHIHVPEGAIPKDGPSAGITMATALVSALTGIPVRQDVAMTGEI 715
Query: 753 TLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
TLRG VLP+GG+K+K+LAA R G++ V++P+ N KD+ E+P V +L+I ++ME VL
Sbjct: 716 TLRGKVLPIGGLKEKLLAALRLGVRTVLVPKDNEKDMAEIPDEVREALDIHFVEQMEQVL 775
Query: 813 EQAF 816
A
Sbjct: 776 SVAL 779
>gi|255528415|ref|ZP_05395214.1| ATP-dependent protease La [Clostridium carboxidivorans P7]
gi|296184880|ref|ZP_06853291.1| ATP-dependent protease La [Clostridium carboxidivorans P7]
gi|255507896|gb|EET84337.1| ATP-dependent protease La [Clostridium carboxidivorans P7]
gi|296050662|gb|EFG90085.1| ATP-dependent protease La [Clostridium carboxidivorans P7]
Length = 773
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 291/667 (43%), Positives = 427/667 (64%), Gaps = 63/667 (9%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ + + E++ +L++ +++ RL K +++ + +++ KI KV+ ++ K
Sbjct: 162 RLADVISSYLTLKQEKKQELLNTYEVEERLQKLLDILINEVDILKIERKIGVKVKNKIDK 221
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
QKE+ L++Q++AI+EELG+ D+D+ +L + K+ A +P N+ + EL RLK
Sbjct: 222 VQKEYYLKEQLKAIQEELGEEDEDKKELAKYKNKISKAKLPKNVKEKALYELERLK---- 277
Query: 274 QQPGYTSS----RVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYL 329
GY++ R YL+ I DLPW K +E+ +LD+K+A+E L+ +HYGL VK RIIEYL
Sbjct: 278 SNGGYSAESGVIRTYLDWILDLPWNKQTED-NLDIKSAREVLEKEHYGLEDVKDRIIEYL 336
Query: 330 AVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTY 389
AV+K+ +GP+LC VGPPGVGKTS+ SIA AL R F+R+SLGGV+DEA+IRGHR+TY
Sbjct: 337 AVKKMSNSLKGPILCLVGPPGVGKTSIGKSIAHALNRNFVRMSLGGVRDEAEIRGHRKTY 396
Query: 390 IGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLN 449
+G++PGR+I G+K+ NP+ LLDEIDK +D +GDPA ALLEVLD EQN TF DHYL
Sbjct: 397 VGAIPGRIIYGMKQAKSKNPLFLLDEIDKMSNDFKGDPADALLEVLDSEQNSTFRDHYLE 456
Query: 450 VPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLG 509
+ FDLS V+F+ TAN + IP PLLDRME+IE+ GYT EEK IA HL+ + L H +
Sbjct: 457 LEFDLSNVLFITTANSLENIPRPLLDRMEIIEVSGYTSEEKFHIAKEHLVAKELKAHEID 516
Query: 510 SEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRL 569
+ ++I ++ ++L+I YTRE+GVR+LER ++++ R A ++ E+++++ + +S V
Sbjct: 517 DDKVKISDSAIQLIIDSYTRESGVRSLERKISSVIRKAIAEIMEKDKKRIILNSTKV--- 573
Query: 570 GSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA 629
+ LGP F +A
Sbjct: 574 ----------------------------------------------KTYLGPEIFTYDKA 587
Query: 630 AERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRAR 689
E G+ +G+ WT +GG+ VE T M G G+L LTGQLGDV+KESA+ ++VRA
Sbjct: 588 DEEDKV-GVVMGMAWTGYGGDTLPVEVTVMPGTGKLELTGQLGDVMKESAKAGYSYVRAN 646
Query: 690 ATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMT 749
A + ED N + +D+HIH P GAVPKDGPSAGVT++TA++S S +V+ + AMT
Sbjct: 647 AHKYGI--ED--NFYKEKDLHIHAPEGAVPKDGPSAGVTMITAIISALSGIKVKHNVAMT 702
Query: 750 GEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRME 809
GE+TL G VLP+GG+K+K LAA+R GI VI+P+ N KDL+++P V + ILA +++
Sbjct: 703 GEITLTGRVLPIGGLKEKSLAAYRAGITTVIIPKDNEKDLIKIPKTVRGKINYILADKID 762
Query: 810 DVLEQAF 816
VLE A
Sbjct: 763 IVLENAL 769
>gi|149372804|ref|ZP_01891825.1| ATP-dependent protease La [unidentified eubacterium SCB49]
gi|149354501|gb|EDM43066.1| ATP-dependent protease La [unidentified eubacterium SCB49]
Length = 805
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/771 (40%), Positives = 461/771 (59%), Gaps = 73/771 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G AR L R ++ P G T V+++G RF V E+ T Y TA + + + E
Sbjct: 94 GTVARIL---RVLKMPDGNTT--VIIQGKKRFEVSEIVTTEPYMTATVKEVAEARPE--- 145
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FEISF 167
+++ +F A+ K A+++I + ++ + FV+S IS
Sbjct: 146 -KKNKEFDAIIESIKELALKII---KSSPNLPSEASFAIKNIESDSFLINFVSSNLNISV 201
Query: 168 EEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAI 227
E + +L+ +LK R +A + ++ Q + + I KV+ +++ Q+E+ L QQM+ I
Sbjct: 202 ENKQHILEINNLKDRALQALKYMNIEFQKLSLKNDIQSKVQEGMNQQQREYFLHQQMKTI 261
Query: 228 KEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLEL 287
+EELG N ++ ++ + ++ + KH KE+ +L++M PQ ++ R YL+L
Sbjct: 262 QEELGGNGS-HAEVEEMKARAKAKNWSEEVQKHFDKEIAKLQRMNPQVAEFSIQRNYLDL 320
Query: 288 IADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVG 347
I DLPWEK S++ DLK AK+ LD DHYGL VK+RIIEYLAV KL+ D + P+LC G
Sbjct: 321 ILDLPWEKFSKD-KFDLKRAKKILDRDHYGLDDVKKRIIEYLAVLKLRNDMKSPILCLYG 379
Query: 348 PPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVC 407
PPGVGKTSL S+A ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR+I LK+ G
Sbjct: 380 PPGVGKTSLGKSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKAGTS 439
Query: 408 NPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQ 467
NPV +LDEIDK + +GDP+SA+LEVLDPEQN F D++L + +DLSKV+F+AT+NR
Sbjct: 440 NPVFVLDEIDKLSTGNQGDPSSAMLEVLDPEQNGAFYDNFLELGYDLSKVMFIATSNRLD 499
Query: 468 PIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRY 527
I P L DRME+I + GYT EEK+ IA +HL+P+ L++HGL + L I + ++ +++ Y
Sbjct: 500 TIQPALRDRMEIINVSGYTIEEKVEIAKQHLLPKQLEEHGLTKKHLTIAKPQLEKIVEGY 559
Query: 528 TREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKD--VHRLGSPLLDNRLADGAEVE 585
TRE+GVR LE+ +A + R AA+ +A E++ + S D V LGSP L+
Sbjct: 560 TRESGVRGLEKQIAKMVRYAAMNIA-MEEKYDIKVSNDVIVEVLGSPKLERN-------- 610
Query: 586 MEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWT 645
++++ + A G+ GL WT
Sbjct: 611 -------------------------------------KYENNDTA------GVVTGLAWT 627
Query: 646 NFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQ 705
GG++ F+E+ +GKG L +TG LG V+KESA IAL +++A A L + E +
Sbjct: 628 RVGGDILFIESILSKGKGTLTMTGNLGKVMKESATIALEYIKANAEKLGVNPE----VFS 683
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
++H+H PAGA PKDGPSAG+T++T+LVSLF++++V+ AMTGE+TLRG VLPVGG+K
Sbjct: 684 KYNVHLHVPAGATPKDGPSAGITMLTSLVSLFTQRKVKKSIAMTGEITLRGKVLPVGGIK 743
Query: 766 DKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+KILAA R IK ++L E N D+ E+ L L K M DVL A
Sbjct: 744 EKILAAKRARIKEILLCEENRSDIEEINPDYLKGLTFHYVKDMSDVLTLAL 794
>gi|71280534|ref|YP_270450.1| ATP-dependent protease La [Colwellia psychrerythraea 34H]
gi|71146274|gb|AAZ26747.1| ATP-dependent protease La [Colwellia psychrerythraea 34H]
Length = 782
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 320/780 (41%), Positives = 470/780 (60%), Gaps = 84/780 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L + ++ P G V V++EG R ++ + Y++A I + T
Sbjct: 69 YSTGTVATILQM---LKLPDGTVK--VLVEGAQRATINKFVETEEYFSAEIEYVGPTAEV 123
Query: 106 MEQVE--------QDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLAD 157
+ +E Q ++ L+++ + +S ++ ++ LAD
Sbjct: 124 NDDIEVLIRSAISQFEGYVKLNKKIPPEVLTSVSGIDDAEQ----------------LAD 167
Query: 158 IFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKE 217
A + ++ +L+ +D+ VRL L++ + +++ +KI +V+ Q+ KSQ++
Sbjct: 168 TMAAHMPLKLADKQKILEIIDVNVRLEHLMALMEGEIDLLQIEKKIRTRVKKQMEKSQRD 227
Query: 218 FLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPG 277
+ L +QM+AI++EL + +D D+L + ++++ A MP E ++LK M P
Sbjct: 228 YYLNEQMKAIQKELNEGEDTPDELEQMAKRIEEAQMPEEAKDKTLAEFQKLKMMSPMSAE 287
Query: 278 YTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPD 337
T R Y++ + ++PW+K S+ + +L A+E LD DHYGL +VK+RI+EYLAV++
Sbjct: 288 ATVVRSYIDCMINVPWKKRSK-LKRNLALAQEVLDKDHYGLDKVKERILEYLAVQQRVSQ 346
Query: 338 ARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRL 397
+GP+LC VGPPGVGKTSL SIA + GRK++R++LGGV+DEA+IRGHRRTYIGS+PG+L
Sbjct: 347 LKGPILCLVGPPGVGKTSLGQSIAKSTGRKYVRMALGGVRDEAEIRGHRRTYIGSLPGKL 406
Query: 398 IDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKV 457
I + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN TFNDHYL V +DLS V
Sbjct: 407 IQKISKVGVKNPLFLLDEIDKMASDMRGDPASALLEVLDPEQNTTFNDHYLEVDYDLSDV 466
Query: 458 IFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE 517
+FVAT+N + IP PLLDRMEVI L GYT +EKL IA HL+ + ++++GL ++ +QI +
Sbjct: 467 MFVATSN-SMDIPGPLLDRMEVIRLSGYTEDEKLNIAKSHLLDKQIERNGLKAKEIQIED 525
Query: 518 AMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNR 577
+ + +I+ YTREAGVR+LER ++ L R A + S LLD +
Sbjct: 526 SAIVGIIRYYTREAGVRSLEREISKLCRKA---------------------VKSILLDKK 564
Query: 578 LADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPG 637
L S + +++ L + LG RFD +A ++ G
Sbjct: 565 L---------------------------SKVTINQENLNEFLGVQRFDYGKADDKNRV-G 596
Query: 638 ISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVA 697
+ GL WT GGE+ +E ++ GKG+L TG LGDV++ES Q A+T VR+R L+ +
Sbjct: 597 LVTGLAWTQVGGELLTIETASVPGKGKLTYTGSLGDVMQESIQAAMTVVRSRTEKLR-IN 655
Query: 698 EDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGL 757
ED + RDIH+H P GA PKDGPSAGV + TALVS + V+AD AMTGE+TLRG
Sbjct: 656 ED---FYEKRDIHVHVPEGATPKDGPSAGVGMCTALVSSLTGNPVKADVAMTGEITLRGE 712
Query: 758 VLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VL +GG+K+K+LAAHR GIK VI+P N +DL E+P V A L I K +++VL A E
Sbjct: 713 VLAIGGLKEKLLAAHRGGIKTVIIPHENERDLQEIPENVKAELSIHPVKWIDEVLALALE 772
>gi|402564000|ref|YP_006606724.1| ATP-dependent protease La 1 [Bacillus thuringiensis HD-771]
gi|434377636|ref|YP_006612280.1| ATP-dependent protease La 1 [Bacillus thuringiensis HD-789]
gi|401792652|gb|AFQ18691.1| ATP-dependent protease La 1 [Bacillus thuringiensis HD-771]
gi|401876193|gb|AFQ28360.1| ATP-dependent protease La 1 [Bacillus thuringiensis HD-789]
Length = 773
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/755 (41%), Positives = 453/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 81 PNG--TLRVLVEGLHRAEVIEFIEEENIVQVSIKTV------TEEVEDDLEEKALMRTLL 132
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 133 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 190
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 191 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 250
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E+I +D
Sbjct: 251 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDI-ID 309
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L++DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 310 LAHSEEILNNDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 369
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L RKF+R SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 370 LNRKFVRASLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 429
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 430 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 489
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 490 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 549
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A + E+++
Sbjct: 550 CRKVAKIIVTAERKR--------------------------------------------- 564
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+VV E + +LG F + AE+ G++ GL +T GG+ +E + GKG
Sbjct: 565 ----IVVTEKKIVDLLGKHIFRYGQ-AEKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 619
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 620 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 675
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 676 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 735
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 736 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 770
>gi|398966269|ref|ZP_10681428.1| ATP-dependent protease La [Pseudomonas sp. GM30]
gi|424922480|ref|ZP_18345841.1| ATP-dependent protease [Pseudomonas fluorescens R124]
gi|398146237|gb|EJM34993.1| ATP-dependent protease La [Pseudomonas sp. GM30]
gi|404303640|gb|EJZ57602.1| ATP-dependent protease [Pseudomonas fluorescens R124]
Length = 798
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/759 (43%), Positives = 461/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S ++ E++ E++ + S
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID----EVDAAERESEVFVRS---- 129
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 130 -----LLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDGDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEIEELKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ E ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQIAANGLKKGELEFDEEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A +E AL E
Sbjct: 543 QIAKVCRKAV-------KEHAL------------------------------------EK 559
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
+ ++T+ L LE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 560 RFSVKVTADL------LEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKI 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|417688202|ref|ZP_12337448.1| ATP-dependent protease La [Shigella boydii 5216-82]
gi|332094595|gb|EGI99641.1| ATP-dependent protease La [Shigella boydii 5216-82]
Length = 784
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 329/765 (43%), Positives = 459/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G +++A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARISALSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKAEAELQKLKMMSPMSAEATVVRGYIDWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLERVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN F+DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFSDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L L + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A ++ LLD L +E+ G++
Sbjct: 544 LEREISKLCRKAVKQL---------------------LLDKSL---KHIEIN----GDNL 575
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
H+ LG RF D A+ G GL WT GG++ +E
Sbjct: 576 HD--------------------YLGVQRF-DYGRADNENRVGQVTGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHF 713
+ GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H
Sbjct: 615 TACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKL------GINPDFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLSIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+ L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPFENKRDLEEIPDNVIVDLDIHPVKRIEEVLTLALQN 773
>gi|323136623|ref|ZP_08071704.1| ATP-dependent protease La [Methylocystis sp. ATCC 49242]
gi|322397940|gb|EFY00461.1| ATP-dependent protease La [Methylocystis sp. ATCC 49242]
Length = 808
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 323/778 (41%), Positives = 461/778 (59%), Gaps = 84/778 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSL--EM-T 102
++ G A L L ++ P G V V++EG+ R SV+ S YY A ++ +M +
Sbjct: 75 YSVGTLASVLQL---LKLPDGTVK--VLVEGVARASVRNYSRTDDYYEADAEAIADDMGS 129
Query: 103 KIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
+E+E + + +F + + K + E++ + Q KLAD
Sbjct: 130 PVEVEALGRSVVAEFESYVKLNKRVSSEVVGAVTQIDD-------------FSKLADTIA 176
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
+ + ++ +L+++++ RL K L++ + ++V ++I +V+ Q+ K+Q+E+ L
Sbjct: 177 SHLSVKIADKQDVLETINVARRLEKCLSLMESEISVLQVEKRIRTRVKRQMEKTQREYYL 236
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD +D +DDL LE ++++ + E ++L++M P T
Sbjct: 237 NEQMKAIQKELGD-EDGKDDLAELEERIKNTKLSKEARDKAVAEFKKLRQMSPMSAEATV 295
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ I +PW K S+ + DL A+E LD++H+GL +VK+RI+EYLAV+ G
Sbjct: 296 VRNYLDWILSIPWGKRSK-VKRDLGQAEEVLDAEHFGLEKVKERILEYLAVQSRANKLTG 354
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 355 PILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRGHRRTYIGSMPGKIIQS 414
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+++ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN +FNDHYL V +DLS V+FV
Sbjct: 415 MRKAKTSNPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNASFNDHYLEVDYDLSNVMFV 474
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
TAN IP PL+DRME+I + GYT EK IA +HLIP + +HGL E I E +
Sbjct: 475 TTANTLN-IPAPLMDRMEIIRIAGYTEAEKAEIARKHLIPNAVHKHGLAPEEWMIAEDGL 533
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+RYTREAGVRNLER ++ LAR A ++
Sbjct: 534 LELIRRYTREAGVRNLEREISNLARKAVKEI----------------------------- 564
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAERVAAPGI 638
+ T+ +VV + LG P R+ E ++V G+
Sbjct: 565 --------------------LLKKTARIVVTADNIADYLGVPKYRYGQAELEDQV---GV 601
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
GL WT GGE+ +E M GKG++ +TG L DV+KES A ++VR+RA D +
Sbjct: 602 VTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISAAASYVRSRAVDFGVEPP 661
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
L RDIH+H P GA PKDGPSAGV + TA+VS+ + VRAD AMTGE+TLRG V
Sbjct: 662 ----LFDRRDIHVHVPEGATPKDGPSAGVAMATAIVSIITGIPVRADIAMTGEITLRGRV 717
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K+LAA R GIK+V++PE N KDL ++P AV LEI+ RME+VL+ A
Sbjct: 718 LPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPDAVKNGLEIVPVARMEEVLQHAL 775
>gi|229032124|ref|ZP_04188101.1| ATP-dependent protease La 1 [Bacillus cereus AH1271]
gi|228729180|gb|EEL80179.1| ATP-dependent protease La 1 [Bacillus cereus AH1271]
Length = 776
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/756 (41%), Positives = 454/756 (60%), Gaps = 67/756 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTV------TEEVEDDLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYMDWLLALPWTEATEDM-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKD-VHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
R AA + E+++ + + K+ V LG +
Sbjct: 553 CRKAAKIIVTAERKRIVVTEKNIVDLLGKHIF---------------------------- 584
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
R+ E ++V G++ GL +T GG+ +E + GK
Sbjct: 585 --------------------RYGQAEKTDQV---GMATGLAYTAAGGDTLAIEVSVAPGK 621
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
G+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDG
Sbjct: 622 GKLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDG 677
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 678 PSAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILP 737
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 738 AENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|228902999|ref|ZP_04067139.1| ATP-dependent protease La 1 [Bacillus thuringiensis IBL 4222]
gi|228967573|ref|ZP_04128599.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|423358432|ref|ZP_17335935.1| lon protease [Bacillus cereus VD022]
gi|423561009|ref|ZP_17537285.1| lon protease [Bacillus cereus MSX-A1]
gi|228792152|gb|EEM39728.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228856675|gb|EEN01195.1| ATP-dependent protease La 1 [Bacillus thuringiensis IBL 4222]
gi|401085685|gb|EJP93922.1| lon protease [Bacillus cereus VD022]
gi|401202854|gb|EJR09704.1| lon protease [Bacillus cereus MSX-A1]
Length = 776
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/755 (41%), Positives = 453/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVIEFIEEENIVQVSIKTV------TEEVEDDLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E+I +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDI-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L++DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNNDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L RKF+R SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRKFVRASLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A + E+++
Sbjct: 553 CRKVAKIIVTAERKR--------------------------------------------- 567
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+VV E + +LG F + AE+ G++ GL +T GG+ +E + GKG
Sbjct: 568 ----IVVTEKKIVDLLGKHIFRYGQ-AEKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|159897212|ref|YP_001543459.1| ATP-dependent protease La [Herpetosiphon aurantiacus DSM 785]
gi|159890251|gb|ABX03331.1| ATP-dependent protease La [Herpetosiphon aurantiacus DSM 785]
Length = 810
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 345/792 (43%), Positives = 464/792 (58%), Gaps = 55/792 (6%)
Query: 27 SKVQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELS 86
S+ ++ A G Q++ GV AR S + P G V +VLEG+ R + +
Sbjct: 61 SEAEIEAYKGHEPQQL---PKVGVVARLEDFS---QLPDGTVK--IVLEGITRAEIVDCV 112
Query: 87 TRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVL-EQKQKTGGRTKV 145
+Y R++ + E + +E D AL K E + L E Q+
Sbjct: 113 QSDPFY--RVACRYLPDQEPKGIEVD----ALMDTVKQQITEFVDYLGEIPQEAVAFVHR 166
Query: 146 LLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQ 205
+ T P H LAD+ SF+++L +L+ ++ RL++ ++ R L+ +R+ KI
Sbjct: 167 I--TTPGH-LADLVTYGPAFSFQDRLELLNEMEPLARLNRVQVILARQLELLRLRAKIQS 223
Query: 206 KVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKEL 265
+ L + QKE+ LR+QMR I+ ELG++DD +D + L RK+ P + E+
Sbjct: 224 DTKEVLDQGQKEYFLREQMRVIRRELGEDDDGDDPIDELRRKVNELNAPQYVKDQALHEI 283
Query: 266 RRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRI 325
+RL + P R YL+ I LPW A + + L +++ LD DHYGL +VK+RI
Sbjct: 284 KRLAQQGMNSPEAGVIRTYLDWIIALPW-NADQVAAISLVQSRQVLDEDHYGLEKVKERI 342
Query: 326 IEYLAVRKLK-PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
+EYLAVRKL R P+LCFVGPPGVGKTSL SIA AL R F+R SLGGV DEA+IRG
Sbjct: 343 LEYLAVRKLAGSKMRSPILCFVGPPGVGKTSLGRSIARALDRPFVRQSLGGVHDEAEIRG 402
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIG+MPGR+I G+K V +LDEIDK G+D RGDP SALLEVLDPEQN TF+
Sbjct: 403 HRRTYIGAMPGRIIQGMKTAKSRQAVFMLDEIDKIGNDFRGDPTSALLEVLDPEQNNTFS 462
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL +PFDLS+V+FVATAN+ +PIP PL DRME+IE+ GYT +EKL IA L+P+ +
Sbjct: 463 DHYLEIPFDLSQVVFVATANQLEPIPAPLRDRMEIIEIGGYTEDEKLAIAQGFLLPKQRE 522
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
HGL S L++ +A + +I+ YTREAGVRNLER +AAL R A KVAE + E+A
Sbjct: 523 FHGLESSQLELTDAAILKLIREYTREAGVRNLEREVAALCRKIARKVAESQDEEA----- 577
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRF 624
P + ++D A + LGP F
Sbjct: 578 -------------------------PQEGKKRRKKAKKAEPTKFLIDAADVPIYLGPEHF 612
Query: 625 DDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALT 684
AE G++ G+ WT GG++ E + GKGEL LTGQLGDV+KESAQ A++
Sbjct: 613 -SFGMAEVSDQIGVATGVAWTPTGGDILSFEVLPLTGKGELRLTGQLGDVMKESAQAAMS 671
Query: 685 WVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRA 744
+VR RA +L + N IHIH P GAVPKDGPSAG+TL AL+S + + VR
Sbjct: 672 YVRYRAKELGIEP----NYFDEHSIHIHVPEGAVPKDGPSAGITLTIALISAMTGRAVRR 727
Query: 745 DTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIIL 804
D AMTGE+TLRG VLP+GG+K+K LAAHR GIK ILP+ N KD+V++P V L++I
Sbjct: 728 DVAMTGEVTLRGRVLPIGGLKEKTLAAHRAGIKTFILPKENAKDIVDLPEKVRQDLQLIP 787
Query: 805 AKRMEDVLEQAF 816
+ M++VL A
Sbjct: 788 VETMDEVLTIAL 799
>gi|117926914|ref|YP_867531.1| Lon-A peptidase [Magnetococcus marinus MC-1]
gi|117610670|gb|ABK46125.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Magnetococcus marinus MC-1]
Length = 812
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 298/625 (47%), Positives = 399/625 (63%), Gaps = 55/625 (8%)
Query: 192 RHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSA 251
R ++ I+V ++I +V+ Q+ KS +++ L +QM+AI++ELGD ++D++ L K+++A
Sbjct: 209 REIEVIQVEKRIRGRVKKQMEKSHRDYYLNEQMKAIQKELGDEGSEKDEITELTEKIEAA 268
Query: 252 GMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERL 311
GMP+ + K EL++LK+M P T R Y++ + LPW K SE + DL A+ L
Sbjct: 269 GMPAEVKKKADGELKKLKQMSPMSAEATVVRTYIDWLVSLPWNKESE-LKHDLTEAETIL 327
Query: 312 DSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRI 371
+ DH GL +VK+RI+EYLAV+K +GP+LC VGPPGVGKTSLA SIA A GR+++RI
Sbjct: 328 EEDHDGLKKVKERILEYLAVQKKVGKMKGPILCLVGPPGVGKTSLAKSIARATGREYVRI 387
Query: 372 SLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASAL 431
SLGGV+DEA+IRGHRRTYIGSMPG++I +KR G NP+ LLDEIDK GSD RGDP+SAL
Sbjct: 388 SLGGVRDEAEIRGHRRTYIGSMPGKIIQSMKRAGTRNPLFLLDEIDKVGSDYRGDPSSAL 447
Query: 432 LEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKL 491
LEVLDPEQN F+DHY+ V ++LS V+F+ TAN I PLLDRMEVI L GYT +EKL
Sbjct: 448 LEVLDPEQNVAFSDHYMEVDYNLSNVMFITTANSLN-IARPLLDRMEVIRLAGYTEDEKL 506
Query: 492 RIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKV 551
RIA R+LIPR +++HGL + L I + +I+ YTRE+GVRNLER + AL R AA +
Sbjct: 507 RIATRYLIPRQMEEHGLTEQELSISSGTITDIIRYYTRESGVRNLEREVGALCRKAARIL 566
Query: 552 AEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVD 611
+E N ++T +
Sbjct: 567 LTEE--------------------------------------------NRKKVT----IT 578
Query: 612 EAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQL 671
LEK LG RF AE G++ GL WT GGE+ +EAT + GKG +TG+L
Sbjct: 579 AQSLEKYLGTRRF-RFGIAEEADIVGVTTGLAWTEVGGEILTIEATHLEGKGSFTITGKL 637
Query: 672 GDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVT 731
GDV++ES Q A+T R+ A + E Q RD HIH P GA PKDGPSAG+ L T
Sbjct: 638 GDVMQESVQAAMTCARSMAEGWGIKGE----FFQKRDFHIHVPEGATPKDGPSAGIALCT 693
Query: 732 ALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVE 791
LVS + V D AMTGE+TLRG VL +GG+K+K+LAAHR GI+RV++PE N+KDL E
Sbjct: 694 TLVSCMTGIAVCKDVAMTGEITLRGRVLIIGGLKEKLLAAHRAGIRRVLIPEDNVKDLKE 753
Query: 792 VPAAVLASLEIILAKRMEDVLEQAF 816
+P ++L LEI + + +VL+ A
Sbjct: 754 IPQSILKDLEIHPVRHVSEVLKLAL 778
>gi|336173802|ref|YP_004580940.1| anti-sigma H sporulation factor LonB [Lacinutrix sp. 5H-3-7-4]
gi|334728374|gb|AEH02512.1| anti-sigma H sporulation factor, LonB [Lacinutrix sp. 5H-3-7-4]
Length = 815
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 304/772 (39%), Positives = 464/772 (60%), Gaps = 70/772 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G AR L + ++ P G T V+++G RFSV E+ T Y A + + E
Sbjct: 102 HEIGTVARILKV---LKMPDGNTT--VIIQGKKRFSVAEVITEEPYINATVREVP----E 152
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FE 164
+ +++ +F A+ K A+++I + ++ + FV+S
Sbjct: 153 AKPAKKNKEFQAIIDSIKELALQII---KDSPNIPSEASFAIQNIESDSFLINFVSSNMN 209
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+ +++ +L+ DLK R + + ++ LQ + + I KV+ +++ Q+E+ L QQM
Sbjct: 210 LPVKDKQALLEKNDLKDRALETLKFMNIELQKLELKNDIQSKVQSDMNQQQREYFLNQQM 269
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+ I+EELG + +E + ++++ ++ + +H +KEL ++++M PQ Y+ R Y
Sbjct: 270 KTIQEELGGGNAEE--MEDMKKRAKAKKWDDKVAEHFEKELSKMQRMNPQVAEYSIQRNY 327
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
L+L DLPW + S++ DLK AK+ LD DHYGL VK+RIIEYLAV KL+ D + P+LC
Sbjct: 328 LDLFLDLPWNEFSKD-KFDLKRAKKILDRDHYGLDDVKKRIIEYLAVLKLRNDMKSPILC 386
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
GPPGVGKTSL SIA ALGR+++R+SLGG++DEA+IRGHR+TYIG+MPGR+I LK+
Sbjct: 387 LYGPPGVGKTSLGKSIAEALGREYVRMSLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKA 446
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G NPV +LDEIDK + +GDP+SALLEVLDPEQN F+D++L + +DLSKV+F+AT+N
Sbjct: 447 GTSNPVFVLDEIDKLSNSHQGDPSSALLEVLDPEQNSEFHDNFLEMGYDLSKVMFIATSN 506
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
+ P L DRME+I + GYT EEK+ I RHL+P+ L +HGL + L++ + ++ ++
Sbjct: 507 SLANLQPALRDRMEIINVTGYTIEEKVEIGKRHLLPKQLKEHGLEDKHLKLGKPQLEKIV 566
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEV 584
+ YTRE+GVR L++ +A + R AA+ +A +E+
Sbjct: 567 EGYTRESGVRTLDKKIAKMVRYAAMNIAMEEEYDV------------------------- 601
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
++T+ VVD VLG P+ +R+ E G+ GL W
Sbjct: 602 ------------------KVTNDTVVD------VLGGPKL-ERDKYENNDVAGVVTGLAW 636
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GG++ F+E+ +GKG L +TG +G V+KESA IA+ +++A A + + E +
Sbjct: 637 TRVGGDILFIESILSKGKGSLSITGNIGKVMKESATIAMEYIKANADEFGINPE----VF 692
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
++HIH P GA PKDGPSAGVT++T+LVSLF++K+V+ AMTGE+TLRG VLPVGG+
Sbjct: 693 DKYNVHIHVPEGATPKDGPSAGVTMLTSLVSLFTQKKVKKSIAMTGEITLRGKVLPVGGI 752
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K+KILAA R IK ++L E N +D+ E+ + L+ M+DVL+ A
Sbjct: 753 KEKILAAKRAKIKEILLCEENKRDIEEIKPEYVKGLKFHFVTDMKDVLKLAL 804
>gi|228910305|ref|ZP_04074122.1| ATP-dependent protease La 1 [Bacillus thuringiensis IBL 200]
gi|228849365|gb|EEM94202.1| ATP-dependent protease La 1 [Bacillus thuringiensis IBL 200]
Length = 776
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 454/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVIEFIEEENIVQVSIKTV------TEEVEDDLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E+I +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPVSSAESGVIRNYIDWLLALPWTEATEDI-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L++DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNNDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN+ F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNQNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A + E+++
Sbjct: 553 CRKVAKIIVTAERKR--------------------------------------------- 567
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+VV E + +LG F + AE+ G++ GL +T GG+ +E + GKG
Sbjct: 568 ----IVVTEKKIVDLLGKHIFRYGQ-AEKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|158423234|ref|YP_001524526.1| ATP-dependent protease La [Azorhizobium caulinodans ORS 571]
gi|302425035|sp|A8HYF7.1|LON_AZOC5 RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|158330123|dbj|BAF87608.1| ATP-dependent protease La [Azorhizobium caulinodans ORS 571]
Length = 856
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 333/794 (41%), Positives = 461/794 (58%), Gaps = 86/794 (10%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
Q ASD + I+ G A L L ++ P G V V++EG+ R V + + R
Sbjct: 112 QENASDDDPATDAIY--RVGTLATVLQL---LKLPDGTVK--VLVEGVTRAQVVQYTDRA 164
Query: 90 TYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLET 149
Y A SL PD + + +A A +++ E K KV E
Sbjct: 165 DLYEAEAISL-------------PDEVGDVVEAEALARSVVNEFENYVKLN--KKVSPEV 209
Query: 150 VPI-------HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEK 202
V + KLAD + + E+ +L++V + RL K L++ + ++V ++
Sbjct: 210 VGVVGQIEDHAKLADTIASHLAVKIPEKQAVLETVKVADRLEKVLGLMESEISVLQVEKR 269
Query: 203 ITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQ 262
I +V+ Q+ K+Q+E+ L +QM+AI++ELGD +D DDL LE +++ + +
Sbjct: 270 IRTRVKRQMEKTQREYYLNEQMKAIQKELGD-EDGRDDLQELEDRIKRTKLTKEAREKAT 328
Query: 263 KELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVK 322
EL++L++M P T R YL+ + +PW S+ + DL A+ LDSDHYGL +VK
Sbjct: 329 HELKKLRQMSPMSAEATVVRNYLDWLLSIPWGIKSK-VKKDLPFAQSVLDSDHYGLDKVK 387
Query: 323 QRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADI 382
+RI+EYLAV+ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+I
Sbjct: 388 ERIVEYLAVQSRANKLAGPILCLVGPPGVGKTSLGRSIAKATGREFVRVSLGGVRDEAEI 447
Query: 383 RGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKT 442
RGHRRTYIGSMPG++I +++ NP+ LLDEIDK G+D RGDP++ALLEVLDPEQN T
Sbjct: 448 RGHRRTYIGSMPGKIIQSMRKAKKSNPLFLLDEIDKMGADFRGDPSAALLEVLDPEQNPT 507
Query: 443 FNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRV 502
FNDHYL V +DLS V+FV TAN IPP LLDRMEVI + GYT +EK I+ +HLIP
Sbjct: 508 FNDHYLEVDYDLSNVMFVTTANTLN-IPPALLDRMEVIRIAGYTEDEKAEISRKHLIPNA 566
Query: 503 LDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPS 562
L +HGL ++ I +A + VI+RYTREAGVRNLER ++ LAR A ++ +++ +
Sbjct: 567 LQKHGLSAKEWSIDDAALLQVIRRYTREAGVRNLEREISTLARKAVKELVISKKKSVKVT 626
Query: 563 SKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP 622
+K+ LE LG P
Sbjct: 627 AKN-------------------------------------------------LETFLGVP 637
Query: 623 RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
RF E ER G+ GL WT GGE+ +E M GKG + +TG L +V+KES A
Sbjct: 638 RFRYGE-IEREDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLKEVMKESISAA 696
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+R+ D + L + RDIH+H P GA PKDGPSAGV + T +VS+ + V
Sbjct: 697 ASYVRSRSVDFGIEPP----LFERRDIHVHVPEGATPKDGPSAGVAMATTIVSVLTGIPV 752
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL ++P V +LEI
Sbjct: 753 RRDVAMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPDNVKNALEI 812
Query: 803 ILAKRMEDVLEQAF 816
I RM++VL A
Sbjct: 813 IPVSRMDEVLHHAL 826
>gi|407364030|ref|ZP_11110562.1| ATP-dependent protease La [Pseudomonas mandelii JR-1]
Length = 798
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 327/761 (42%), Positives = 454/761 (59%), Gaps = 80/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQF- 122
P G V V++EG R +V+ S + A +S ++ +++ + E + +L QF
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID--EVDAPERESEVFVRSLLAQFE 135
Query: 123 ------KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDS 176
K E++S L + G +L D A + E++ +L+
Sbjct: 136 QYVQLGKKVPAEVLSSLNSIDEPG-------------RLVDTMAAHMALKIEQKQEILEI 182
Query: 177 VDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDD 236
+DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 183 IDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDE 242
Query: 237 DEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKA 296
+++ L++++ +AG+P + Q EL +LK+M P T R Y++ + +PW KA
Sbjct: 243 GHNEIEELKKRIDAAGLPKDALAKAQGELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KA 301
Query: 297 SEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSL 356
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSL
Sbjct: 302 QSKVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSL 361
Query: 357 ASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEI 416
A SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEI
Sbjct: 362 AESIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEI 421
Query: 417 DKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDR 476
DK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDR
Sbjct: 422 DKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDR 480
Query: 477 MEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNL 536
MEVI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR L
Sbjct: 481 MEVIRLPGYTEDEKINIAVKYLSPKQITANGLKKGELEFDAEAIRDIIRYYTREAGVRGL 540
Query: 537 ERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTH 596
ER +A + R A H
Sbjct: 541 ERQIAKVCRKAV---------------------------------------------KEH 555
Query: 597 EVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEA 656
+ F + V MLE LG +F AE G GL WT GGE+ +EA
Sbjct: 556 ALEKRFSVK----VTAEMLEHFLGVRKF-RYGLAESQDQIGQVTGLAWTQVGGELLTIEA 610
Query: 657 TAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAG 716
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P G
Sbjct: 611 AVVPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEG 666
Query: 717 AVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGI 776
A PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GI
Sbjct: 667 ATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGI 726
Query: 777 KRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
K VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 727 KTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|430003194|emb|CCF18979.1| ATP-dependent protease La [Rhizobium sp.]
Length = 806
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 318/796 (39%), Positives = 455/796 (57%), Gaps = 87/796 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ A D + I+ G A L L ++ P G V V++EG R + + R
Sbjct: 57 TQINAGDDDPEPSAIY--KIGTVANVLQL---LKLPDGTVK--VLVEGRARAKIDSYTDR 109
Query: 89 GTYYTARISSL---EMTKIEMEQ-----VEQDPDFIALSRQFKATAMELISVLEQKQKTG 140
+Y A+ + L E +E+E V + +++ L+++ + S +E
Sbjct: 110 DEFYEAKANILAEPEEDAVEVEALSRSVVSEFENYVKLNKKISPEVVGAASQIED----- 164
Query: 141 GRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVA 200
KLAD + I E+ ML++V +K RL KA ++ + ++V
Sbjct: 165 -----------YSKLADTVASHLSIKITEKQEMLETVSVKGRLEKALGFMEGEISVLQVE 213
Query: 201 EKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKH 260
++I +V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D++ LE ++ + +
Sbjct: 214 KRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDGEDGRDEMAELEERIAKTKLSKEAREK 273
Query: 261 VQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVR 320
E+++L++M P T R YL+ + +PW K S+ I DL A++ L+ DH+GL +
Sbjct: 274 ADAEMKKLRQMSPMSAEATVVRNYLDWLLSIPWSKKSK-IKTDLNNAEKILEQDHFGLEK 332
Query: 321 VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEA 380
VK+RI+EYLAV+ +GP+LC VGPPGVGKTSLA SIA A GR+++R++LGGV+DEA
Sbjct: 333 VKERIVEYLAVQARATKIKGPILCLVGPPGVGKTSLAQSIAKATGREYVRMALGGVRDEA 392
Query: 381 DIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQN 440
+IRGHRRTYIGSMPG++I +K+ NP+ LLDEIDK G D RGDP+SALLEVLDP QN
Sbjct: 393 EIRGHRRTYIGSMPGKVIQSMKKAKKSNPLFLLDEIDKLGQDYRGDPSSALLEVLDPAQN 452
Query: 441 KTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIP 500
TF DHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT EEKL IA RHL+P
Sbjct: 453 STFMDHYLEVEYDLSDVMFITTANTLN-IPAPLMDRMEIIRIAGYTEEEKLEIAKRHLLP 511
Query: 501 RVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQAL 560
+ + +H L + + + VIQ+YTREAGVRN ER L LAR A ++ + + +
Sbjct: 512 KAIKEHALQPNEFSVSDDALMAVIQQYTREAGVRNFERELMKLARKAVTEIIKGKTKTVD 571
Query: 561 PSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLG 620
++ ++H LG
Sbjct: 572 VTAANIHDF-------------------------------------------------LG 582
Query: 621 PPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQ 680
PRF E AER G+ GL WT GGE+ +E M GKG + +TG L DV+KES
Sbjct: 583 VPRFRHGE-AEREDQVGVVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLRDVMKESIS 641
Query: 681 IALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRK 740
A ++VR+RA D + DIH+H P GA PKDGPSAGV + TA+VS+ +
Sbjct: 642 AAASYVRSRAVDFGIEPPR----FDKSDIHVHVPEGATPKDGPSAGVAMATAIVSIMTGI 697
Query: 741 RVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASL 800
V + AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL ++P V ++
Sbjct: 698 PVDKNVAMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPDNVKNNM 757
Query: 801 EIILAKRMEDVLEQAF 816
EII RM +V+E A
Sbjct: 758 EIIPVSRMGEVIEHAL 773
>gi|399033935|ref|ZP_10732416.1| ATP-dependent protease La [Flavobacterium sp. CF136]
gi|398067767|gb|EJL59246.1| ATP-dependent protease La [Flavobacterium sp. CF136]
Length = 817
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 318/772 (41%), Positives = 453/772 (58%), Gaps = 69/772 (8%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G AR L R ++ P G VT V+L+G RF + E+ + Y TA I + E
Sbjct: 102 HKIGTVARIL---RVLKMPDGNVT--VILQGKKRFEIDEVVSEEPYITATIKEVS----E 152
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FE 164
E D +F A+ K A+++I ++ ++ + FV+S
Sbjct: 153 ERPDENDTEFTAILDSVKELAIQII---KESPNIPSEATFAIKNIESQSFLINFVSSNMN 209
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+S +E+ +L LK R + ++ LQ + + I KV L + Q+E+ L QQM
Sbjct: 210 LSVKEKQGLLSINGLKDRALETLRYMNVELQKLELKNDIQSKVRFDLDQQQREYFLHQQM 269
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+ I+EELG E+++ + +K ++ KH +KEL ++++M PQ P + R Y
Sbjct: 270 KTIQEELG-GVSQEEEMDEMGQKAKTKKWDEKTQKHFEKELSKMRRMNPQSPDFGIQRNY 328
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
LEL +LPW + S++ DLK A++ LD DH+GL VK+R+IE+LAV KL+ D + P++C
Sbjct: 329 LELFLELPWGEYSKD-KFDLKFAQKILDKDHFGLEEVKKRMIEHLAVLKLRNDMKSPIIC 387
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
GPPGVGKTS+ S+A ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR+I LK+
Sbjct: 388 LTGPPGVGKTSIGRSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKA 447
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G NPV +LDEIDK + GDP+SALLEVLDPEQN +F D++L + +DLSKV+F+AT+N
Sbjct: 448 GTSNPVFILDEIDKLSNGNSGDPSSALLEVLDPEQNSSFYDNFLEMGYDLSKVMFIATSN 507
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
I P L DRMEVI++ GYT EEK+ IA RHL P+ L+ HGL ++ L I + ++ ++
Sbjct: 508 NMSAIQPALRDRMEVIKMSGYTIEEKVEIAKRHLFPKQLEAHGLTAKDLTIGKKQLEKIV 567
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEV 584
+ YTRE+GVRNLE +A + R AA VA +E+ + +D+
Sbjct: 568 EGYTRESGVRNLETKIAQVIRNAAKAVAMEEEYNKKVTDEDI------------------ 609
Query: 585 EMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVW 644
IT VLG PR +R+ E G+ GL W
Sbjct: 610 -------------------IT------------VLGVPRL-ERDKYENNDVAGVVTGLAW 637
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T+ GG++ F+E+ GKG L +TG LG+V+KESA IAL +++A A L L E L
Sbjct: 638 TSVGGDILFIESLISEGKGALTITGNLGNVMKESATIALEYIKANAKKLGLSVE----LF 693
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
Q +IH+H P GA PKDGPSAG+ ++T+LVSL ++K+V+ AMTGE+TLRG VLPVGG+
Sbjct: 694 QKYNIHLHVPEGATPKDGPSAGIAMLTSLVSLLTQKKVKKSLAMTGEITLRGKVLPVGGI 753
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
K+KILAA R IK +IL N D+ E+ A L L K M +VL A
Sbjct: 754 KEKILAAKRANIKEIILCYENKSDIDEIKAEYLEGLTFHYVKEMSEVLALAL 805
>gi|219848081|ref|YP_002462514.1| ATP-dependent protease La [Chloroflexus aggregans DSM 9485]
gi|219542340|gb|ACL24078.1| ATP-dependent protease La [Chloroflexus aggregans DSM 9485]
Length = 809
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 300/663 (45%), Positives = 421/663 (63%), Gaps = 60/663 (9%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD+ A IS EE+ +L+ VD++ RL L+ + L + + +I +V+ ++ +
Sbjct: 179 ELADVIAALLPISVEERQKILELVDIEQRLRHLEVLLAKELDLLELENRIHSQVQQEVDR 238
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E LR+Q+RAI+ ELG D ++ L + +AG+P ++EL RL + P
Sbjct: 239 SQREMFLREQLRAIQRELGQEDPSRREIALLRERAAAAGLPPYAMARFEEELARLDLISP 298
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
P + R YL+ + LPW AS E + DL+AA E L+ +HYGL +VK RI+EY+AVR+
Sbjct: 299 MSPEHGMLRTYLDWLISLPWSNASPE-NRDLRAAAEVLERNHYGLRKVKDRILEYIAVRQ 357
Query: 334 LK-PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGS 392
L P R P+LCFVGPPGVGKTSL SIA ALGR+F+R+SLGGV DEA+IRGHRRTYIG+
Sbjct: 358 LAGPARRAPILCFVGPPGVGKTSLGQSIAEALGRRFVRLSLGGVHDEAEIRGHRRTYIGA 417
Query: 393 MPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPF 452
+PGR++ +K G NPV +LDE+DK GSD RGDPA+ALLEVLDPEQN TF+DHYL++P+
Sbjct: 418 LPGRILQRMKVAGTINPVFMLDEVDKLGSDFRGDPAAALLEVLDPEQNSTFSDHYLDLPY 477
Query: 453 DLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEF 512
DLS+ +F+ TAN A IP LLDRME++ELPGYT +EKL IA R LIPR + GL +
Sbjct: 478 DLSQTLFITTANVADAIPEALLDRMELVELPGYTEDEKLYIARRFLIPRQMADSGLPPKT 537
Query: 513 LQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSP 572
+++ + +I+ YT EAGVRNLER + A+ R A ++AE +
Sbjct: 538 IRLSNETIHTIIRHYTYEAGVRNLEREIGAICRKIARRIAEGKHH--------------- 582
Query: 573 LLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAA 630
P + L K+LGPPRF+ E
Sbjct: 583 ----------------------------------PRRITPRALPKLLGPPRFEIGKIEPH 608
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARA 690
++V G+++G+V+T+ GG++ VE M GKG L LTGQLG++++ESAQ AL++ RA A
Sbjct: 609 DQV---GVAIGMVYTSAGGDIMPVEVVLMDGKGNLILTGQLGEIMQESAQAALSFARANA 665
Query: 691 TDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTG 750
T L + + D+H+H P GA PKDGPSAG+T+ AL+S + ++VR D AMTG
Sbjct: 666 TRLGI----EIRHFDKIDVHVHVPEGATPKDGPSAGITIAIALISALTGRKVRHDVAMTG 721
Query: 751 EMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMED 810
E+TL G +LP+GGVK+K+L A+R GI+++ILP+RN DLVE+P + L I L +R+E
Sbjct: 722 EITLHGRILPIGGVKEKVLGAYRAGIRQIILPKRNEHDLVEIPPTLRRQLTIHLIERIEQ 781
Query: 811 VLE 813
++
Sbjct: 782 AID 784
>gi|293392543|ref|ZP_06636863.1| ATP-dependent protease La [Serratia odorifera DSM 4582]
gi|291424945|gb|EFE98154.1| ATP-dependent protease La [Serratia odorifera DSM 4582]
Length = 784
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 325/765 (42%), Positives = 459/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE I E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITTLSDSGEHFAAQAEYLESPAIDEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDAAR----------------LADTIAAHMPLKLSDKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIDAAKMPKEAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVRNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQIERNALKKNELTVDDSAIIGIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R AVK + L+D ++
Sbjct: 544 LEREISKLCRK-AVK--------------------TLLMDKKIKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG R D A R+ G GL WT GG++
Sbjct: 568 ------------IEINGDNLKDYLGVQRVDYGRADTENRI---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + A + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKLGINA----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A LEI +++++VL A +
Sbjct: 729 GGIKTVLIPYENKRDLEEIPDNVIADLEIHPVQKIDEVLNIALQN 773
>gi|386759378|ref|YP_006232594.1| protein LonA [Bacillus sp. JS]
gi|384932660|gb|AFI29338.1| LonA [Bacillus sp. JS]
Length = 774
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 294/667 (44%), Positives = 423/667 (63%), Gaps = 59/667 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
++ADI + + +++ +L++ D+K RL+K + ++ + + + +KI Q+V+ + +
Sbjct: 162 RMADIVASHLPLKLKDKQDILETADVKDRLNKVIDFINNEKEVLEIEKKIGQRVKRSMER 221
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+ LR+QM+AI++ELGD + ++ L K++ AGMP ++ + KEL R +K+
Sbjct: 222 TQKEYYLREQMKAIQKELGDKEGKTGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPS 281
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
+ R Y++ + LPW +++ LDLK A LD +H+GL +VK+RI+EYLAV+K
Sbjct: 282 SSAESSVIRSYIDWLIALPWTDETDD-KLDLKEAGRLLDEEHHGLEKVKERILEYLAVQK 340
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LC GPPGVGKTSLA SIA +LGRKF+RISLGGV+DE++IRGHRRTY+G+M
Sbjct: 341 LTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGGVRDESEIRGHRRTYVGAM 400
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I G+K+ G NPV LLDEIDK SD RGDP+SA+LEVLDPEQN +F+DHY+ FD
Sbjct: 401 PGRIIQGMKKAGKLNPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSSFSDHYIEETFD 460
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+F+ATAN IP PL DRME+I + GYT EKL I HL+P+ + +HGL L
Sbjct: 461 LSKVLFIATANNLATIPGPLRDRMEIINIAGYTEIEKLEIVKDHLLPKQIKEHGLKKSNL 520
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
Q+ + + +I+ YTREAGVR+LER LAA+ R AA + +E++
Sbjct: 521 QLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERK---------------- 564
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAE 631
RIT V E L+ +G R+ E +
Sbjct: 565 -----------------------------RIT----VTEKNLQDFIGKRIFRYGQAETED 591
Query: 632 RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
+V G+ GL +T GG+ +E + GKG+L LTG+LGDV++ESAQ A ++VR++
Sbjct: 592 QV---GVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTE 648
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
+L + + + DIHIH P GAVPKDGPSAG+T+ TALVS + + V + MTGE
Sbjct: 649 ELGIEP----DFHEKYDIHIHVPEGAVPKDGPSAGITMATALVSALTGRAVSREVGMTGE 704
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+K+K L AHR G+K +I P+ N KD+ ++P +V L ILA +++V
Sbjct: 705 ITLRGRVLPIGGLKEKALGAHRAGLKTIIAPKENEKDIEDIPESVREGLTFILASHLDEV 764
Query: 812 LEQAFEG 818
LE A G
Sbjct: 765 LEHALVG 771
>gi|407789643|ref|ZP_11136743.1| ATP-dependent protease La [Gallaecimonas xiamenensis 3-C-1]
gi|407206303|gb|EKE76261.1| ATP-dependent protease La [Gallaecimonas xiamenensis 3-C-1]
Length = 784
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 325/761 (42%), Positives = 454/761 (59%), Gaps = 81/761 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EG R + L T Y ++ LE T IE ++ + Q +
Sbjct: 84 PDGTVK--VLVEGNQRARIDSLQTDDDYLHGEVTFLESTPIEEQEQEVLLRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + +S +++ + LAD A I +E+ +L+
Sbjct: 142 IKLNKKIPPEVLTSLSGIDEPAR----------------LADTMAAHMPIKLDEKQKVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+ + R+ L++ + +++ ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ +
Sbjct: 186 IIPVGERIEYLLGLMESEIDLLQIEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGELE 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ L+RK+ AGMP + EL +LK M P T R Y++ + +PW K
Sbjct: 246 DTPDEFEGLQRKIDEAGMPEEVRTKASSELSKLKMMSPMSAEATVVRSYIDWLVSVPWSK 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
++ + D+ A+E L++DH+GL +VK+RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 KTK-VKKDIAKAEEILNADHFGLEKVKERILEYLAVQARSSKLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSMPGKLIQKMSKVGVRNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN TF DHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNATFADHYLEVDYDLSDVMFVATSN-SMNIPGPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA HL+P+ + ++GL L + ++ + +I+ YTREAGVRN
Sbjct: 484 RMEVIRLSGYTEDEKLNIARNHLLPKQIGRNGLKKGELVVEDSAIIGIIRYYTREAGVRN 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER L+ L R A K L KD+
Sbjct: 544 LERELSTLCRKAVKK---------LLLEKDI----------------------------- 565
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
NT + +D L LG RFD A + G GL WT GG++ +E
Sbjct: 566 ----NT------VTIDGDNLHDFLGVMRFDYGRADDENRI-GQVTGLAWTEVGGDLLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
A ++ GKG+L TG LGDV+KES Q A+T VR+RA L++ + + + RDIHIH P
Sbjct: 615 AASVPGKGKLTYTGSLGDVMKESIQAAMTVVRSRAEKLRINS----DFHEKRDIHIHVPE 670
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR G
Sbjct: 671 GATPKDGPSAGIAMCTALVSSLTGNPVRADVAMTGEITLRGEVLRIGGLKEKLLAAHRGG 730
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
IK+V++P N +DL E+P V L I K ++DVL+ A
Sbjct: 731 IKQVLIPYENERDLEEIPENVKQDLVIHPVKWIDDVLKLAL 771
>gi|228935789|ref|ZP_04098601.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228823846|gb|EEM69666.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 776
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 455/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTV------TEEVEADLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ + +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIISVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW A+E++ +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYMDWLLALPWTDATEDM-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKSVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLQEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + + K+
Sbjct: 553 CRKAAKIIVTAERKRIVVTEKN-------------------------------------- 574
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
VVD +LG F +A E+ G++ GL +T GG+ +E + GKG
Sbjct: 575 -----VVD------LLGKHIFRYGQA-EKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ + N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQIDS----NFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|422016476|ref|ZP_16363059.1| DNA-binding ATP-dependent protease La [Providencia burhodogranariea
DSM 19968]
gi|414092675|gb|EKT54348.1| DNA-binding ATP-dependent protease La [Providencia burhodogranariea
DSM 19968]
Length = 808
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 325/774 (41%), Positives = 463/774 (59%), Gaps = 78/774 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE------MTKIEM---EQVEQDPD 114
P G V V++EGL R + L+ G Y+ A+ LE + EM E+ + P
Sbjct: 84 PDGTVK--VLVEGLKRARISSLTDNGEYFLAQAEYLEPESAKHTPETEMFYDEEGTKTPS 141
Query: 115 FIALSRQ-----FKATAMELISVLEQKQKTGGRTKVLLETVP---IHKLADIFVASFEIS 166
L + ++ + S ++ +K L ++ + KLAD + +
Sbjct: 142 SDVLDEKEQEVLYRTIVSQFESYIKLNKKIPPEVLTSLHSIEQDQLDKLADTIASHMPLK 201
Query: 167 FEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRA 226
++ +L+ ++ R+ +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+A
Sbjct: 202 LADKQRVLEMANISERVEFLMAMMESETELLQVEKRIRNRVKKQMEKSQREYYLNEQMKA 261
Query: 227 IKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLE 286
I++ELG+ DD D+ +L+RK++ A MP + + EL++LK M P T R Y++
Sbjct: 262 IQKELGEMDDAPDEYESLKRKIEDAKMPKEAHEKAEAELQKLKMMSPMSAEATVVRSYID 321
Query: 287 LIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFV 346
+ +PW K S+ + DL A+E LD+DHYGL RVK+RI+EYLAV+ +GP+LC V
Sbjct: 322 WMVQVPWNKRSK-VKKDLVKAQEILDTDHYGLDRVKERILEYLAVQSRVSKIKGPILCLV 380
Query: 347 GPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGV 406
GPPGVGKTSL SIA A GR++ R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV
Sbjct: 381 GPPGVGKTSLGQSIAKATGREYTRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGV 440
Query: 407 CNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRA 466
NP+ LLDEIDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N +
Sbjct: 441 KNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-S 499
Query: 467 QPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQR 526
IP PLLDRMEVI L GYT +EKL IA +HL+ + + ++ L + I ++ + +I+
Sbjct: 500 MNIPAPLLDRMEVIRLSGYTEDEKLNIAKQHLLSKQIQRNALKKGEITIEDSALVSIIRY 559
Query: 527 YTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEM 586
YTREAGVR+LER ++ L R A + S L+D +L
Sbjct: 560 YTREAGVRSLEREISKLCRKA---------------------VKSLLMDKKLKH------ 592
Query: 587 EVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVW 644
+ ++ L+ LG +FD +A RV G GL W
Sbjct: 593 ---------------------IEINAENLKDFLGVRKFDYGQADTENRV---GQVTGLAW 628
Query: 645 TNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLL 704
T GG++ +E + GKG+L TG LG+V++ES Q ALT VRARA L + + +
Sbjct: 629 TEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINS----DFY 684
Query: 705 QGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGV 764
+ RDIH+H P GA PKDGPSAG+ + TALVS + V+AD AMTGE+TLRGLVLP+GG+
Sbjct: 685 EKRDIHVHVPEGATPKDGPSAGIAMSTALVSCLTGNPVKADVAMTGEITLRGLVLPIGGL 744
Query: 765 KDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
K+K+LAAHR GIK V++P N +DL E+P V+A LEI K +E+VL A +
Sbjct: 745 KEKLLAAHRGGIKTVLIPFENKRDLEEIPENVIADLEIHPVKTIEEVLSLALQN 798
>gi|423406112|ref|ZP_17383261.1| lon protease [Bacillus cereus BAG2X1-3]
gi|401660463|gb|EJS77944.1| lon protease [Bacillus cereus BAG2X1-3]
Length = 776
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/756 (41%), Positives = 454/756 (60%), Gaps = 67/756 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVVEFIEEENVAQVSIKTI------TEEVEDDLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYMDWLLALPWTEATEDM-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LVHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKD-VHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
R AA + E+++ + + K+ V LG +
Sbjct: 553 CRKAAKIIVTAERKRIVVTEKNIVDLLGKHIF---------------------------- 584
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
R+ E ++V G++ GL +T GG+ +E + GK
Sbjct: 585 --------------------RYGQAEKTDQV---GMATGLAYTAAGGDTLAIEVSVAPGK 621
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
G+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDG
Sbjct: 622 GKLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDG 677
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 678 PSAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILP 737
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 738 AENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|423395237|ref|ZP_17372438.1| lon protease [Bacillus cereus BAG2X1-1]
gi|401655052|gb|EJS72588.1| lon protease [Bacillus cereus BAG2X1-1]
Length = 776
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/756 (41%), Positives = 454/756 (60%), Gaps = 67/756 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVVEFIEEENVAQVSIKTI------TEEVEDDLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYMDWLLGLPWTEATEDM-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LVHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKD-VHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
R AA + E+++ + + K+ V LG +
Sbjct: 553 CRKAAKIIVTAERKRIVVTEKNIVDLLGKHIF---------------------------- 584
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
R+ E ++V G++ GL +T GG+ +E + GK
Sbjct: 585 --------------------RYGQAEKTDQV---GMATGLAYTAAGGDTLAIEVSVAPGK 621
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
G+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDG
Sbjct: 622 GKLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDG 677
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 678 PSAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILP 737
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 738 AENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|423400682|ref|ZP_17377855.1| lon protease [Bacillus cereus BAG2X1-2]
gi|423457284|ref|ZP_17434081.1| lon protease [Bacillus cereus BAG5X2-1]
gi|423478610|ref|ZP_17455325.1| lon protease [Bacillus cereus BAG6X1-1]
gi|401148646|gb|EJQ56136.1| lon protease [Bacillus cereus BAG5X2-1]
gi|401654520|gb|EJS72061.1| lon protease [Bacillus cereus BAG2X1-2]
gi|402427410|gb|EJV59518.1| lon protease [Bacillus cereus BAG6X1-1]
Length = 776
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 312/756 (41%), Positives = 454/756 (60%), Gaps = 67/756 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTV------TEEVEDDLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYMDWLLALPWTEATEDM-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN +P PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSVPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKD-VHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
R AA + E+++ + + K+ V LG +
Sbjct: 553 CRKAAKIIVTAERKRIVVTEKNIVDLLGKHIF---------------------------- 584
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
R+ E ++V G++ GL +T GG+ +E + GK
Sbjct: 585 --------------------RYGQAEKTDQV---GMATGLAYTAAGGDTLAIEVSVAPGK 621
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
G+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDG
Sbjct: 622 GKLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDG 677
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 678 PSAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILP 737
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 738 AENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|452752506|ref|ZP_21952248.1| ATP-dependent protease La [alpha proteobacterium JLT2015]
gi|451960233|gb|EMD82647.1| ATP-dependent protease La [alpha proteobacterium JLT2015]
Length = 799
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 323/776 (41%), Positives = 459/776 (59%), Gaps = 85/776 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-------- 100
G A L L ++ P G V V++EG R V+EL T G Y+ A LE
Sbjct: 67 GAVATVLQL---LKLPDGTVK--VLVEGQDRARVRELDTSGDYFEASFEVLEDKNSDETE 121
Query: 101 MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
+ ++ +Q +++ L+++ A E++ ++Q + ++AD
Sbjct: 122 LAALQKSATDQFENYVRLNKKI---APEVVVQVQQMEDA-------------ARVADAIA 165
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A+ + E+ +L RL +++ + ++V +KI +V+ Q+ K+Q+E+ L
Sbjct: 166 ANLSVKIAERQALLSEPSPAKRLEMVLGMMEGEMGVLQVEKKIKGRVKRQMEKTQREYYL 225
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI+ ELGD +D D++ LE K+Q + + + EL++LK M PQ T
Sbjct: 226 NEQMKAIQRELGDGGEDGDEIAELEEKIQKTRLSAEALEKATSELKKLKAMAPQSAEATV 285
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + LPW K S + DLKAA++ LDSDHYGL +VK+RI+EYLAV+ +G
Sbjct: 286 VRNYLDTLLGLPWSKKSR-VAKDLKAAQDVLDSDHYGLEKVKERIVEYLAVQSRAKKIKG 344
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA A GRKFIR SLGGV+DEA+IRGHRRTYIGSMPG+++
Sbjct: 345 PILCLVGPPGVGKTSLGRSIAKATGRKFIRQSLGGVRDEAEIRGHRRTYIGSMPGKVLQN 404
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+K+ G NP+ LLDEIDK G D RGDP+SALLEVLDPEQN FNDHYL V +DLS V+FV
Sbjct: 405 MKKAGTSNPLFLLDEIDKLGQDFRGDPSSALLEVLDPEQNSKFNDHYLEVDYDLSNVMFV 464
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
TAN +P PLLDRME+I L GYT +EK+ IA HL+P+ +++HGL +E + E +
Sbjct: 465 TTANSLN-MPQPLLDRMEIIRLSGYTEDEKVEIAKSHLLPKQVEEHGLKAEEFSLSEDAI 523
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A LAR + K+ EQ
Sbjct: 524 RDLIRYYTREAGVRTLEREIARLARKSLRKIIEQ-------------------------- 557
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
AE + + P ++ HE + + R+ E +++ G +
Sbjct: 558 -AETSVSITP--DNLHEFAGVRKF------------------RYGVSEEEDQI---GAAT 593
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG + TG+LGDV+KES Q AL++++AR+ + +
Sbjct: 594 GLAWTEVGGELLTLEAVTVPGKGNIRTTGKLGDVMKESIQAALSFIKARSPEYGIKP--- 650
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
++ RDIH+H P GA PKDGPSAG+ +VTA++S + VR D AMTGE+TLRG VLP
Sbjct: 651 -DIFARRDIHVHVPEGATPKDGPSAGIGMVTAIISTLTDVPVRKDVAMTGEVTLRGRVLP 709
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+GG+K+K+LAA R GIK V++P N KDL E+P + LEI +++VL A
Sbjct: 710 IGGLKEKLLAALRGGIKTVLIPAENEKDLAEIPDNITGGLEIHPVSHVDEVLRLAL 765
>gi|398985561|ref|ZP_10691096.1| ATP-dependent protease La [Pseudomonas sp. GM24]
gi|399015404|ref|ZP_10717677.1| ATP-dependent protease La [Pseudomonas sp. GM16]
gi|398108655|gb|EJL98608.1| ATP-dependent protease La [Pseudomonas sp. GM16]
gi|398153940|gb|EJM42431.1| ATP-dependent protease La [Pseudomonas sp. GM24]
Length = 798
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 330/759 (43%), Positives = 458/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S +E + A R+ +
Sbjct: 80 PDGTVK--VLVEGEQRGTVERFSEVDGHCRAEVSLIE-------------EVDAAERESE 124
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 125 VFVRTLLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEIEDLKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQIAANGLKKGELEFDAEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A +E AL E
Sbjct: 543 QIAKVCRKAV-------KEHAL------------------------------------EK 559
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
+ ++T+ L LE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 560 RFSVKVTADL------LEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKI 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|451822959|ref|YP_007459233.1| ATP-dependent Lon protease [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
gi|451775759|gb|AGF46800.1| ATP-dependent Lon protease [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
Length = 806
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 329/793 (41%), Positives = 463/793 (58%), Gaps = 81/793 (10%)
Query: 34 SDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYT 93
S GK+ ++ G A L + ++ P G V V++EG+ R + + T++
Sbjct: 60 SAGKDDPNSSDLYDVGCVANVLQM---LKLPDGTVK--VLVEGVRRVIINSVEETDTHFM 114
Query: 94 ARISSLE----MTKIEMEQV-----EQDPDFIALSRQFKATAMELISVLEQKQKTGGRTK 144
I+ +E + IE+E + +Q +I L+++ A + IS
Sbjct: 115 CNINYIENACSASNIEIEALRRALMDQFDQYIKLNKKIPAEIITSIS------------- 161
Query: 145 VLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
E I++ D + I E + +L+ L R+ +D ++ ++V +KI
Sbjct: 162 ---EISDIYRFVDTLSSHLPIKLEYKQRILEMSSLIERIEFLLSQIDNEIEILQVEKKIK 218
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+++ Q+ KSQK++ L +Q +AI++ELG+ DD L LE+K+ S+ + K V+ E
Sbjct: 219 TRIKKQMEKSQKDYYLNEQFKAIQKELGEGDDISG-LEELEKKIISSHISKEARKKVEAE 277
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
+LK M P R Y+E + +LPW+K S+ I+LD++ A+ LD DHYGL +VK+R
Sbjct: 278 FSKLKMMSPMSAEANVVRNYIETVVNLPWKKKSK-INLDIRHAENSLDCDHYGLDKVKER 336
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV+K + P+LC VGPPGVGKTSL SIA A RKF+R++LGGV+DEA+IRG
Sbjct: 337 ILEYLAVQKRVHKIKAPILCLVGPPGVGKTSLGQSIAKATNRKFVRMALGGVRDEAEIRG 396
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG+++ L + GV NP+ LLDEIDK G D RGDPASALLEVLDPEQN TF
Sbjct: 397 HRRTYIGSMPGKILQSLSKSGVRNPLFLLDEIDKIGMDFRGDPASALLEVLDPEQNNTFQ 456
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHY+ + FDLS V+FVAT+N IPP LLDRMEVI L GYT EKL IA HLIP++
Sbjct: 457 DHYIEIDFDLSDVMFVATSNTMN-IPPALLDRMEVINLSGYTEYEKLYIAKNHLIPKLFK 515
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+GL E L+I ++ + +I+ YTREAGVR+LER ++ + R VK+ Q++E S
Sbjct: 516 SNGLSLEELEIKDSALTDIIRYYTREAGVRSLEREISKICR-KIVKLFLQQEESGSYSK- 573
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRF 624
S LVV+ L+K LG R+
Sbjct: 574 -----------------------------------------SILVVNSENLDKYLGVRRY 592
Query: 625 DDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALT 684
D ++ G GL WT GG++ +E + GKG + TG LGDV+KES A T
Sbjct: 593 -DFGLTQKENRIGQVTGLAWTQVGGDLLTIEVVDLYGKGGILRTGSLGDVMKESVDTART 651
Query: 685 WVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRA 744
V+AR L L +ED RDIH+HFP GA PKDGPSAG+ +VTA+ S S VR+
Sbjct: 652 VVKARLGSLGL-SED---FFDKRDIHVHFPEGATPKDGPSAGIAIVTAMASSLSNIPVRS 707
Query: 745 DTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIIL 804
D AMTGE+TLRG VL +GG+K+K+LAAH G+K VI+PE N++DL ++P V +LEI+
Sbjct: 708 DVAMTGEITLRGEVLAIGGLKEKLLAAHSGGVKVVIIPEDNVRDLTDIPDIVKENLEIVP 767
Query: 805 AKRMEDVLEQAFE 817
+ ++ VL+ A E
Sbjct: 768 VRWIDKVLDIALE 780
>gi|311069313|ref|YP_003974236.1| class III heat-shock ATP-dependent LonA protease [Bacillus
atrophaeus 1942]
gi|419820030|ref|ZP_14343647.1| class III heat-shock ATP-dependent LonA protease [Bacillus
atrophaeus C89]
gi|310869830|gb|ADP33305.1| class III heat-shock ATP-dependent LonA protease [Bacillus
atrophaeus 1942]
gi|388475883|gb|EIM12589.1| class III heat-shock ATP-dependent LonA protease [Bacillus
atrophaeus C89]
Length = 774
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/766 (40%), Positives = 461/766 (60%), Gaps = 87/766 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-----------MTKIEMEQVEQD 112
P+G T V++EG+ R + E + Y T I + + + ++ +Q
Sbjct: 82 PNG--TIRVLVEGIQRAQITEYTELEEYTTVDIQLIHEDDSKDVEDEALMRTLLDHFDQ- 138
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I +S++ A ++ +E+ GR +ADI + + +++
Sbjct: 139 --YIKISKKISAETYAAVTDIEEP----GR------------MADIVASHLPLKLKDKQD 180
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L++ +K RL+K +L++ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELG
Sbjct: 181 ILETAAVKDRLNKVIDLINNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELG 240
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D + ++ L K++ AGMP ++ + KEL R +K+ + R Y++ + LP
Sbjct: 241 DKEGKTGEVQTLTEKIEEAGMPDHVKETALKELSRYEKVPSSSAESSVIRNYIDWLIALP 300
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W A+E+ LD+KAA + LD +H+GL +VK+RI+EYLAV++L +GP+LC GPPGVG
Sbjct: 301 WTDATED-KLDIKAAGDLLDEEHHGLEKVKERILEYLAVQQLTKSLKGPILCLAGPPGVG 359
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSLA SIA ++GR F+RISLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV L
Sbjct: 360 KTSLAKSIAKSMGRSFVRISLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGKLNPVFL 419
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK SD RGDP+SA+LEVLDPEQN TF+DHY+ FDLSKV+F+ATAN IP P
Sbjct: 420 LDEIDKMSSDFRGDPSSAMLEVLDPEQNSTFSDHYIEENFDLSKVLFIATANNLATIPGP 479
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
L DRME+I + GYT EKL I HL+P+ L +HGL LQI + + +I+ YTREAG
Sbjct: 480 LRDRMEIINISGYTEIEKLEIVKDHLLPKQLKEHGLKKGNLQIRDQAILDIIRYYTREAG 539
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VR+LER LAA+ R AA + +E++
Sbjct: 540 VRSLERQLAAICRKAAKSIVAKERK----------------------------------- 564
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQ 652
RIT V E L+ +G F + AE+ G+ GL +T GG+
Sbjct: 565 ----------RIT----VTEKNLQDFIGKRIFRYGQ-AEKEDQVGVVTGLAYTTVGGDTL 609
Query: 653 FVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIH 712
+E + GKG+L LTG+LGDV++ESAQ A ++VR++A +L + + + DIHIH
Sbjct: 610 SIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKAEELGIKP----DFHEKYDIHIH 665
Query: 713 FPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAH 772
P GAVPKDGPSAG+T+ TALVS + + V + MTGE+TLRG VLP+GG+K+K L AH
Sbjct: 666 VPEGAVPKDGPSAGITMATALVSALTGRPVSREVGMTGEITLRGRVLPIGGLKEKALGAH 725
Query: 773 RYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
R G+ +I P+ N KD+ ++P +V L +LA +++VLE A G
Sbjct: 726 RAGLTTIIAPKDNEKDIEDIPESVREGLTFVLASHLDEVLEYALVG 771
>gi|189485258|ref|YP_001956199.1| ATP-dependent protease La [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|302425076|sp|B1GZQ6.1|LON_UNCTG RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|170287217|dbj|BAG13738.1| ATP-dependent protease La [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 802
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 320/779 (41%), Positives = 447/779 (57%), Gaps = 81/779 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCR--FSVQELSTRGTYYTARISSLEMTK 103
+N G L + ++ P G + +V EG+ R ++ +LS +G Y + +
Sbjct: 79 YNIGTICEVLQM---LKMPDGTLKALV--EGISRAQWTDFKLSDKG-YIEVGLKVFDENT 132
Query: 104 IEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIH-----KLADI 158
++M +VE A+ RQ I++ EQ K R + + + +LAD
Sbjct: 133 LKMPEVE------AIMRQ-------TIALFEQYVKLNPRIPIDISVSVSNIADPARLADT 179
Query: 159 FVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEF 218
+ I ++ +L+ VD RL K ++++ ++ + + +I +V Q+ K+QKE+
Sbjct: 180 IASHLVIKNNDKQTILELVDPVKRLEKIIQILNAEIEILNIERRIQNRVRNQIEKTQKEY 239
Query: 219 LLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGY 278
L +QM+AI++EL D+ + DL L+ K++ MP KE+ RL+KM P P
Sbjct: 240 YLTEQMKAIQKELKQKDEAQKDLDDLKGKLKKTKMPQAAKSAADKEMSRLEKMMPMSPEA 299
Query: 279 TSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDA 338
T R YLE I DLPWEK++ + +LDL AKE LD DHYGL +VK R++EYLAV
Sbjct: 300 TVIRTYLEWILDLPWEKSTID-NLDLNRAKEVLDQDHYGLEKVKDRVLEYLAVLSRVQKI 358
Query: 339 RGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLI 398
+GP+LCF+GPPGVGKTS+A S+A +LGR F+RIS+GGVKDEA+IRGHRRTYIGSMPG++I
Sbjct: 359 KGPILCFIGPPGVGKTSIAKSVARSLGRNFVRISMGGVKDEAEIRGHRRTYIGSMPGKII 418
Query: 399 DGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVI 458
+K+ G NPV +LDEIDK GSD RGDP+SALLEVLDPEQN TFNDHYL+V FDLS V+
Sbjct: 419 QSIKKAGSNNPVFILDEIDKIGSDWRGDPSSALLEVLDPEQNYTFNDHYLDVDFDLSNVM 478
Query: 459 FVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEA 518
F+ TAN IP L DR+E+I YT EK IA ++P+ L +HGL E +
Sbjct: 479 FITTANTLNNIPVTLFDRLELIRFSSYTDVEKRHIAEDFIVPKQLKEHGLKPEEFIFDDG 538
Query: 519 MVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRL 578
+ +VI+ YT EAGVRNL R +A L R ++
Sbjct: 539 ALDIVIKNYTHEAGVRNLTREIANLCR-------------------------------KV 567
Query: 579 ADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGI 638
G E E+ + + L K LG ++ AE G+
Sbjct: 568 VKGLEFNKEL-----------------KSITIKPENLNKYLGIAYYERERIAENDV--GV 608
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
+ GL WT GGE +E M GK L LTG+LGDV+KESAQ ALT+VR+ + L++
Sbjct: 609 ATGLAWTEVGGETLTIEVNKMGGKNSLVLTGKLGDVMKESAQAALTYVRSSSQKLKI--- 665
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
N+ D H+H P GAVPKDGPSAG+ L TAL S+ K ++ AMTGE+TLRG V
Sbjct: 666 -DENMFSNTDFHVHVPEGAVPKDGPSAGIALATALASVCMNKPIKKKIAMTGEVTLRGRV 724
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
L +GG+K+K+LAA+R GI ++ PE N KDLV++P V+ L++I M++V+ E
Sbjct: 725 LSIGGLKEKVLAAYREGITMILFPESNKKDLVDIPEDVIKKLQMIPVSHMDEVISLTIE 783
>gi|237803594|ref|ZP_04591179.1| ATP-dependent protease La [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331025576|gb|EGI05632.1| ATP-dependent protease La [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 798
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/777 (42%), Positives = 463/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALTKATAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL +Q E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEIQFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R AVK E+ A+ + D
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCR-KAVKEHATEKRFAVQVTAD--------------- 568
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
MLE LG +F AE+ G
Sbjct: 569 ---------------------------------MLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVISGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|389572049|ref|ZP_10162137.1| ATP-dependent protease La [Bacillus sp. M 2-6]
gi|388428535|gb|EIL86332.1| ATP-dependent protease La [Bacillus sp. M 2-6]
Length = 774
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 311/765 (40%), Positives = 461/765 (60%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP---------- 113
P+G T V++EGL R ++ Y + I E+T+ E++ E +
Sbjct: 82 PNG--TIRVLVEGLNRAQIESYMELEDYTSVDIK--ELTEEELKDAEAEALMRTLLDHFD 137
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
+I +S++ A ++ +E+ GR +ADI + + +++ +
Sbjct: 138 QYIKISKKISAETYATVTDIEEP----GR------------MADIVASHLPLKLKDKQEV 181
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L++VD+K RL++ L+ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELGD
Sbjct: 182 LETVDVKKRLNRVISLIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELGD 241
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
+ ++ L K++ +GMP ++ + KEL R +K+ + R Y++ + +LPW
Sbjct: 242 KEGKTGEVSTLMAKIEESGMPDSVRETALKELNRYEKIPSSSAESSVIRNYIDWLINLPW 301
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
+E+ LDLK A E LD +H+GL +VK+R++EYLAV+KL +GP+LC GPPGVGK
Sbjct: 302 GTYTED-RLDLKLASEILDDEHHGLEKVKERVLEYLAVQKLTNSLKGPILCLAGPPGVGK 360
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSLA SIA +L RKFIRISLGGV+DE++IRGHRRTY+G+MPGR+I G+ + G NPV LL
Sbjct: 361 TSLAKSIAKSLDRKFIRISLGGVRDESEIRGHRRTYVGAMPGRIIRGMSKAGTMNPVFLL 420
Query: 414 DEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPL 473
DEIDK SD RGDP+SA+LEVLDPEQN F+DHY+ FDLS+V+F+ATAN IP PL
Sbjct: 421 DEIDKMSSDFRGDPSSAMLEVLDPEQNHNFSDHYIEETFDLSQVLFIATANNLATIPGPL 480
Query: 474 LDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGV 533
DRME+I + GYT EK I HL+P+ L +HGL LQ+ EA + +I+ YTREAGV
Sbjct: 481 RDRMEIITIAGYTEVEKAEIVKDHLLPKQLKEHGLKKGNLQLREAAIYDMIRYYTREAGV 540
Query: 534 RNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGE 593
R LER LAA+ R AA + +++++ + K++ S L RL
Sbjct: 541 RGLERQLAAICRKAARAIVAEDRKRITVTEKNL----SEFLGKRLY-------------- 582
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
R+ E ++V G+ GL +T+ GG+
Sbjct: 583 -----------------------------RYGQAETTDQV---GVVTGLAYTSVGGDTLS 610
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L LTG+LGDV++ESAQ A +++R++A +L + + + DIHIH
Sbjct: 611 IEVSLSPGKGKLLLTGKLGDVMRESAQAAFSYIRSKADELNIDPQ----FNEKHDIHIHV 666
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GAVPKDGPSAG+T+ TALVS + + V + MTGE+TLRG VLP+GG+K+K L AHR
Sbjct: 667 PEGAVPKDGPSAGITIATALVSALTGRPVSKEVGMTGEITLRGRVLPIGGLKEKALGAHR 726
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
G+K +ILP+ N KD+ ++P +V L I +++VLE+A G
Sbjct: 727 AGLKTIILPKDNEKDIDDIPESVREGLTFIPVSHLDEVLEKALVG 771
>gi|420156909|ref|ZP_14663749.1| endopeptidase La [Clostridium sp. MSTE9]
gi|394756919|gb|EJF39978.1| endopeptidase La [Clostridium sp. MSTE9]
Length = 818
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 295/658 (44%), Positives = 420/658 (63%), Gaps = 53/658 (8%)
Query: 155 LADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKS 214
LAD ++ + FE++ V+L+ + RL K ++++ +Q + + +IT+K Q++++
Sbjct: 169 LADYIASNLMLDFEQKQVILEELHPVRRLEKLVDILEHEVQVLEIENEITEKAREQMNQN 228
Query: 215 QKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQ 274
Q+++ LR+Q++AI ELG++D+ +++ L ++ MP + + KE R KM
Sbjct: 229 QRDYFLREQIKAINYELGEDDNPQEEAEELRERILQLDMPEKQREKLLKECDRFGKMPFG 288
Query: 275 QPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKL 334
+ R YL++ +LPW +S+E +DL A+ LD DHYGL +VK+RI+E LAVRKL
Sbjct: 289 SHEASVIRNYLDICVELPWSTSSKET-IDLAKAQRVLDRDHYGLKKVKERILETLAVRKL 347
Query: 335 KPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMP 394
PD G ++C VGPPGVGKTS+A SIA A+GRK++R+SLGG+ DE+DI GHRRTYIGSMP
Sbjct: 348 APDINGQIVCLVGPPGVGKTSIAKSIAKAIGRKYVRVSLGGIHDESDIMGHRRTYIGSMP 407
Query: 395 GRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDL 454
GR+++ +K+ GV NP++LLDEIDK S RGDPA+ALLEVLD EQN F DHY+++PFDL
Sbjct: 408 GRIMNAVKQAGVNNPLILLDEIDKLSSSFRGDPAAALLEVLDSEQNSAFYDHYIDMPFDL 467
Query: 455 SKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQ 514
SKV+F+ TAN A IP PL DRM+VI L YT EEK +IA RHLIP+ L +HG+ ++ L+
Sbjct: 468 SKVLFLTTANDASTIPEPLFDRMDVIFLSSYTHEEKFQIATRHLIPKQLKKHGISAQTLR 527
Query: 515 IPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLL 574
I A V+ +I YTREAGVRNLERN+AA+ R A ++
Sbjct: 528 ITPAAVRDLIDSYTREAGVRNLERNIAAICRKCAKQI----------------------- 564
Query: 575 DNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVA 634
V GES +IT V + LE +LGP RF E+ ++
Sbjct: 565 -------------VAETGES-------LKIT----VKPSDLEGLLGPRRFKP-ESRNKLD 599
Query: 635 APGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQ 694
G+ GL WT+ GG+ +E M G G+L LTG LG+V+KESAQ A++ +R++A L
Sbjct: 600 EVGLVNGLAWTSVGGQTMPIEVAVMEGNGKLQLTGSLGNVMKESAQTAISCIRSKAAQLG 659
Query: 695 LVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTL 754
+ DG DIHIH P GA+PKDGPSAG+ + TA+ S S+ +R D AMTGE+TL
Sbjct: 660 I---DG-QFYNKTDIHIHVPEGAIPKDGPSAGIAMATAITSALSQIPIRHDVAMTGEITL 715
Query: 755 RGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVL 812
RG VLP+GG+K+K +AA+R GI+ VI+PE N D+ E V ++ + K++++VL
Sbjct: 716 RGRVLPIGGLKEKSMAAYRNGIRTVIIPEDNFSDVSEFDDVVKENIHFVPVKKIDEVL 773
>gi|66044994|ref|YP_234835.1| peptidase S16, ATP-dependent protease La [Pseudomonas syringae pv.
syringae B728a]
gi|63255701|gb|AAY36797.1| ATP-dependent proteinase, Serine peptidase, MEROPS family S16
[Pseudomonas syringae pv. syringae B728a]
Length = 798
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 330/777 (42%), Positives = 459/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A ++ +E
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALIE----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EIDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALTKANAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL + E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEISFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKAV-------------------------------- 552
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
H + F + V MLE LG +F AE+ G
Sbjct: 553 -------------KEHAMEKRFAVQ----VTADMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|167042804|gb|ABZ07522.1| putative Lon protease (S16) C-terminal proteolytic domain protein
[uncultured marine microorganism HF4000_ANIW137I15]
Length = 844
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 325/763 (42%), Positives = 454/763 (59%), Gaps = 74/763 (9%)
Query: 59 RGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIAL 118
+ V P G V +V EGL R +Q + G + + L+ + A
Sbjct: 122 QAVNLPEGAVKMLV--EGLGRIRIQSIQDDGEFLKGEVIDLDESA-------------AP 166
Query: 119 SRQFKATAMELISVLEQKQKTGGRT--KVL--LETVPIHKL-ADIFVASFEISFEEQLVM 173
S KA A +I EQ K R +VL +E P L AD + + +++ +
Sbjct: 167 SLADKALARRVIKRFEQYLKLSQRIPPEVLTSVENAPNPGLMADTIAGNLPLKLADRVRL 226
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L+ + R+ E++ ++ + V +I KV+ ++ +SQKE+ L +QM+AI+EELG
Sbjct: 227 LEDLTPVERMEDLLEILSSEIEVMTVEREIRGKVKKRIDRSQKEYYLTEQMKAIQEELGA 286
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
DD ++ +K++ A MP+ + + +KE+RRL+ M P R YL+ + DLPW
Sbjct: 287 GDDLRSEVEEFRQKVRQAKMPAAVMEKTEKEIRRLESMPPMSAESAVVRNYLDWLVDLPW 346
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
K S E +LDL A+ L DH+GL +VK+RI+EYLAVR+L +GP+LC VGPPGVGK
Sbjct: 347 AKRSRE-NLDLAHAEAVLKEDHHGLEKVKERILEYLAVRRLVRKPKGPILCLVGPPGVGK 405
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSL SIA A RKF RISLGG++DEA+IRGHRRTYIGS+PGR+I + RVG NPV++L
Sbjct: 406 TSLGRSIARATHRKFARISLGGIRDEAEIRGHRRTYIGSLPGRIIQSMHRVGTVNPVLML 465
Query: 414 DEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPL 473
DEIDK D RGDP SALLEVLDPEQNK+F+DHYL V +DLS+V F+ATAN IPP L
Sbjct: 466 DEIDKLSFDFRGDPTSALLEVLDPEQNKSFSDHYLEVDYDLSQVFFIATANVLDRIPPTL 525
Query: 474 LDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGV 533
DR+E++ + GYT EEKL IA + L+P+ + +HGL E +++ ++ + + YTREAGV
Sbjct: 526 RDRLEILRISGYTEEEKLSIARKFLLPKEIREHGLKPEQVRVSPKALQRISREYTREAGV 585
Query: 534 RNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGE 593
RNLER LAA+ R AA +VA + E+
Sbjct: 586 RNLERELAAICRKAARRVATEGGER----------------------------------- 610
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
P+ V L+ LG PR + ++ A G++ GL WT GGE+
Sbjct: 611 -------------PVRVHPGNLKSFLGVPRHRVSQGMDK-AEVGVATGLAWTENGGELLL 656
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
E M G G+L LTGQLG+V++ESA+ A+++VRARA +L L+ + + RDIHIH
Sbjct: 657 TEIGLMPGTGKLTLTGQLGEVLQESARAAVSFVRARADELDLL----RDFSKKRDIHIHV 712
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P G++PKDGPSAGVT+V ALVS + +RVR MTGE+TLRG VL VGG+K+K+LAAHR
Sbjct: 713 PEGSIPKDGPSAGVTIVVALVSALTGRRVRNSVCMTGEITLRGKVLAVGGIKEKVLAAHR 772
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
G + VILP+ N +DL E+P AV L + + +++++ A
Sbjct: 773 AGYECVILPKENERDLDEIPQAVRRVLRVQMVDQVDEIFPLAL 815
>gi|170751516|ref|YP_001757776.1| ATP-dependent protease La [Methylobacterium radiotolerans JCM 2831]
gi|170658038|gb|ACB27093.1| ATP-dependent protease La [Methylobacterium radiotolerans JCM 2831]
Length = 808
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 327/795 (41%), Positives = 466/795 (58%), Gaps = 85/795 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ A D + I+ G A L L ++ P G V V++EG+ R V + +
Sbjct: 61 TQINAGDDDPATDAIY--KIGTLASVLQL---LKLPDGTVK--VLVEGVGRAKVVDFTRS 113
Query: 89 GTYYTARISSLE---MTKIEMEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRT 143
+Y A +L ++E E + + +F + K + E++S + Q +
Sbjct: 114 DEFYEATAEALHDELGDRVEAEALARSVLSEFENYVKLNKKISPEVVSAVTQIDEPS--- 170
Query: 144 KVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKI 203
KLAD + + ++ +L++ + RL + L++ + ++V ++I
Sbjct: 171 ----------KLADTIGSHLLVKISDKQGILETPTVAQRLERVLSLMESEISVLQVEKRI 220
Query: 204 TQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQK 263
+V+ Q+ K+Q+E+ L +QM+AI++ELGD++D D+L LE K++ +
Sbjct: 221 RTRVKRQMEKTQREYYLNEQMKAIQKELGDSEDGRDELAELEEKIEKTKLSKEARDKATA 280
Query: 264 ELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQ 323
EL++L++M P T R YL+ + +PW K S+ I DL A+ LD DH+GL +VK+
Sbjct: 281 ELKKLRQMSPMSAEATVVRNYLDWMLGIPWGKRSK-IKKDLLGAQALLDEDHFGLDKVKE 339
Query: 324 RIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIR 383
RI+EYLAV++ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IR
Sbjct: 340 RIVEYLAVQQRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIR 399
Query: 384 GHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTF 443
GHRRTYIGSMPG+++ +++ NP++LLDEIDK G D RGDP++ALLEVLDPEQN TF
Sbjct: 400 GHRRTYIGSMPGKIVQSMRKAKTSNPLILLDEIDKMGMDFRGDPSAALLEVLDPEQNSTF 459
Query: 444 NDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVL 503
NDHYL V +DLS V+FV TAN IP PL+DRMEVI + GYT EEK+ IA +HLIP L
Sbjct: 460 NDHYLEVDYDLSNVMFVTTANTLN-IPGPLMDRMEVIRIAGYTEEEKVEIARKHLIPNAL 518
Query: 504 DQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSS 563
+HGLG+ I + + ++++RYTREAGVRNLER L+ L R A +E + +
Sbjct: 519 KKHGLGTHEWSIDDDGLMMLVRRYTREAGVRNLERELSNLIRKAV-------KEILITKT 571
Query: 564 KDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP- 622
K V V E +P+ LGPP
Sbjct: 572 KSVA----------------VTPETLPV--------------------------FLGPPK 589
Query: 623 -RFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQI 681
R+ + +A ++V G+ GL WT GGE+ +E M GKG++ +TG L DV+KES
Sbjct: 590 FRYGEIDADDQV---GVVTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLKDVMKESISA 646
Query: 682 ALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKR 741
A ++VR+RA D + L RDIH+H P GA PKDGPSAG+ + TA++S +
Sbjct: 647 AASYVRSRAIDFGIEPP----LFDRRDIHVHVPEGATPKDGPSAGIAMATAIISTLTGIP 702
Query: 742 VRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLE 801
VR D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KD+ EVP +V LE
Sbjct: 703 VRRDVAMTGEVTLRGRVLPIGGLKEKLLAALRGGIKTVLIPEENAKDIAEVPDSVKNGLE 762
Query: 802 IILAKRMEDVLEQAF 816
II RM+ VLE+A
Sbjct: 763 IIPVSRMDQVLEKAL 777
>gi|426408623|ref|YP_007028722.1| ATP-dependent protease La [Pseudomonas sp. UW4]
gi|426266840|gb|AFY18917.1| ATP-dependent protease La [Pseudomonas sp. UW4]
Length = 798
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 328/759 (43%), Positives = 456/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S ++ E++ E++ + S
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID----EVDAPERESEVFVRS---- 129
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 130 -----LLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEVEELKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQITANGLKKGELEFDAEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A H +
Sbjct: 543 QIAKVCRKAV---------------------------------------------KEHAL 557
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
F + V MLE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 558 EKRFSVK----VTADMLEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKT 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|229111941|ref|ZP_04241485.1| ATP-dependent protease La 1 [Bacillus cereus Rock1-15]
gi|228671505|gb|EEL26805.1| ATP-dependent protease La 1 [Bacillus cereus Rock1-15]
Length = 776
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/755 (41%), Positives = 452/755 (59%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + A R
Sbjct: 84 PNG--TLRVLVEGLHRAEVIEFIEEENVVQVSIKTV------TEEVEDDLEEKAFMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 QTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E+I +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDI-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L++DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LTHSEEILNNDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A + E+++
Sbjct: 553 CRKVAKIIVTAERKR--------------------------------------------- 567
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+VV E + +LG F + AE+ G++ GL +T GG+ +E + GKG
Sbjct: 568 ----IVVTEKKIVDLLGKHIFRYGQ-AEKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|212709199|ref|ZP_03317327.1| hypothetical protein PROVALCAL_00232 [Providencia alcalifaciens DSM
30120]
gi|212688111|gb|EEB47639.1| hypothetical protein PROVALCAL_00232 [Providencia alcalifaciens DSM
30120]
Length = 809
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/782 (42%), Positives = 459/782 (58%), Gaps = 103/782 (13%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI--------------------SSLEMTK 103
P G V V++EGL R + L+ G Y+ A+ S+ E+
Sbjct: 84 PDGTVK--VLVEGLRRARITSLTDNGEYFLAQAEYLPNDSAKAAIYDDASKEPSAAELVD 141
Query: 104 IEMEQ-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLA 156
E EQ V Q +I L+++ + + +EQ Q + KLA
Sbjct: 142 -EKEQEVLYRTIVSQFESYIKLNKKIPPEVLTSLHTIEQDQ--------------LDKLA 186
Query: 157 DIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQK 216
D + + ++ +L+ ++ R+ +++ + ++V ++I +V+ Q+ KSQ+
Sbjct: 187 DTIASHMPLKLADKQRVLEMANIAERVEFLMAMMESETELLQVEKRIRNRVKKQMEKSQR 246
Query: 217 EFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQP 276
E+ L +QM+AI++ELG+ DD D+ +L+RK++ A MP + + EL++LK M P
Sbjct: 247 EYYLNEQMKAIQKELGEMDDAPDENESLKRKIEEAKMPKEAQEKAEAELQKLKMMSPMSA 306
Query: 277 GYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKP 336
T R Y++ + +PW K S+ + DL A+E LD+DHYGL RVK RI+EYLAV+
Sbjct: 307 EATVVRSYIDWMVQVPWHKRSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVS 365
Query: 337 DARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGR 396
+GP+LC VGPPGVGKTSL SIA A GR++ R++LGGV+DEA+IRGHRRTYIGSMPG+
Sbjct: 366 KIKGPILCLVGPPGVGKTSLGQSIAKATGREYTRMALGGVRDEAEIRGHRRTYIGSMPGK 425
Query: 397 LIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 456
LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS
Sbjct: 426 LIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSD 485
Query: 457 VIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIP 516
V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA RHL+ + ++++ L L I
Sbjct: 486 VMFVATSN-SMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLSKQIERNALKKGELSID 544
Query: 517 EAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDN 576
+ + +I+ YTREAGVR LER ++ L R A +AL L+D
Sbjct: 545 DGALMSIIRYYTREAGVRGLEREISKLCRKAV---------KAL------------LMDK 583
Query: 577 RLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVA 634
+L IT+ L+ LG RFD + RV
Sbjct: 584 KL---------------------KHIEITAD------NLKDYLGVRRFDYGHADTENRV- 615
Query: 635 APGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQ 694
G GL WT GG++ +E + GKG+L TG LG+V++ES Q ALT VRARA L
Sbjct: 616 --GQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQTALTVVRARAEKLG 673
Query: 695 LVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTL 754
+ + + RDIH+H P GA PKDGPSAG+ + TALVS + V+AD AMTGE+TL
Sbjct: 674 I----NSDFYEKRDIHVHVPEGATPKDGPSAGIAMSTALVSCLTGNPVKADVAMTGEITL 729
Query: 755 RGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQ 814
RGLVLP+GG+K+K+LAAHR GIK V++P+ N +DL E+P V+A L+I K +E+VL
Sbjct: 730 RGLVLPIGGLKEKLLAAHRGGIKTVLIPDDNKRDLEEIPQNVIADLQIHPVKTIEEVLSL 789
Query: 815 AF 816
A
Sbjct: 790 AL 791
>gi|218899638|ref|YP_002448049.1| ATP-dependent protease La 1 [Bacillus cereus G9842]
gi|218544883|gb|ACK97277.1| ATP-dependent protease La 1 [Bacillus cereus G9842]
Length = 776
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 315/755 (41%), Positives = 453/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVIEFIEEENIVQVSIKTV------TEEVEGDLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E+I +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDI-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L++DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNNDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L RKF+R SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRKFVRASLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A + E+++
Sbjct: 553 CRKVAKIIVTAERKR--------------------------------------------- 567
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+VV E + +LG F + AE+ G++ GL +T GG+ +E + GKG
Sbjct: 568 ----IVVTEKKIVDLLGKHIFRYGQ-AEKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|228923223|ref|ZP_04086513.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228954753|ref|ZP_04116775.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960746|ref|ZP_04122385.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229071979|ref|ZP_04205189.1| ATP-dependent protease La 1 [Bacillus cereus F65185]
gi|229081736|ref|ZP_04214229.1| ATP-dependent protease La 1 [Bacillus cereus Rock4-2]
gi|229192682|ref|ZP_04319641.1| ATP-dependent protease La 1 [Bacillus cereus ATCC 10876]
gi|423426607|ref|ZP_17403638.1| lon protease [Bacillus cereus BAG3X2-2]
gi|423437916|ref|ZP_17414897.1| lon protease [Bacillus cereus BAG4X12-1]
gi|423502843|ref|ZP_17479435.1| lon protease [Bacillus cereus HD73]
gi|423582678|ref|ZP_17558789.1| lon protease [Bacillus cereus VD014]
gi|423631193|ref|ZP_17606940.1| lon protease [Bacillus cereus VD154]
gi|423634657|ref|ZP_17610310.1| lon protease [Bacillus cereus VD156]
gi|423650376|ref|ZP_17625946.1| lon protease [Bacillus cereus VD169]
gi|449091435|ref|YP_007423876.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228590772|gb|EEK48632.1| ATP-dependent protease La 1 [Bacillus cereus ATCC 10876]
gi|228701581|gb|EEL54074.1| ATP-dependent protease La 1 [Bacillus cereus Rock4-2]
gi|228711138|gb|EEL63103.1| ATP-dependent protease La 1 [Bacillus cereus F65185]
gi|228798962|gb|EEM45937.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228804951|gb|EEM51548.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228836429|gb|EEM81780.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401110523|gb|EJQ18427.1| lon protease [Bacillus cereus BAG3X2-2]
gi|401119899|gb|EJQ27704.1| lon protease [Bacillus cereus BAG4X12-1]
gi|401211493|gb|EJR18240.1| lon protease [Bacillus cereus VD014]
gi|401264082|gb|EJR70195.1| lon protease [Bacillus cereus VD154]
gi|401280636|gb|EJR86556.1| lon protease [Bacillus cereus VD156]
gi|401282274|gb|EJR88177.1| lon protease [Bacillus cereus VD169]
gi|402459808|gb|EJV91539.1| lon protease [Bacillus cereus HD73]
gi|449025192|gb|AGE80355.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 776
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/755 (41%), Positives = 452/755 (59%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + A R
Sbjct: 84 PNG--TLRVLVEGLHRAEVIEFIEEENVVQVSIKTV------TEEVEDDLEEKAFMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 QTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E+I +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDI-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L++DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNNDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A + E+++
Sbjct: 553 CRKVAKIIVTAERKR--------------------------------------------- 567
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+VV E + +LG F + AE+ G++ GL +T GG+ +E + GKG
Sbjct: 568 ----IVVTEKKIVDLLGKHIFRYGQ-AEKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|437999903|ref|YP_007183636.1| ATP-dependent protease La [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451812829|ref|YP_007449282.1| ATP-dependent Lon protease [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|429339137|gb|AFZ83559.1| ATP-dependent protease La [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451778798|gb|AGF49678.1| ATP-dependent Lon protease [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 806
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 317/762 (41%), Positives = 461/762 (60%), Gaps = 79/762 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI---SSLEMTKIEMEQV-----EQDPDF 115
P G V V++EG+ R S+ + T++ I S++++ KIE+E + EQ ++
Sbjct: 87 PDGTVK--VLVEGIQRVSITTIDNLDTHFVCNIDYISNVDIDKIELEALRRALTEQFDEY 144
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ L+++ + E+IS L + +LA A I E + +L+
Sbjct: 145 LKLNKKIPS---EVISSL-------------FDIKEAERLAYTIAAHLPIKLENKQGILE 188
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
++ L ++ +D + ++V +KI +V+ Q+ KSQ+++ L +Q +AI++ELG+ +
Sbjct: 189 TISLSEQMELLLSYIDMEIDILQVEKKIRGRVKKQMEKSQRDYYLNEQFKAIQKELGEGE 248
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D+ L LE+K+ SA + K + EL +LK M P R Y+E + +LPW+K
Sbjct: 249 DN--GLEELEKKINSANLSKEACKKIDSELSKLKLMSPMSAEANVIRNYIETVINLPWKK 306
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ I+++L A+ LD+DHYGL +VK RIIEYLAV+K + P+LC VGPPGVGKTS
Sbjct: 307 KSK-ININLINAESVLDNDHYGLEKVKNRIIEYLAVQKRVKKLKAPILCLVGPPGVGKTS 365
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPG+++ + +VGV NP+ LLDE
Sbjct: 366 LGQSIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGKILQNISKVGVSNPLFLLDE 425
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
+DK G D RGDPASALLEVLDPEQN TF DHY+ V FDLS V+FVAT+N IPP LLD
Sbjct: 426 VDKIGMDFRGDPASALLEVLDPEQNNTFQDHYVEVDFDLSDVMFVATSNTFN-IPPALLD 484
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+I L GYT +EKL IA HL+P+++ +G+ + L I ++ + +I+ YTREAGVR+
Sbjct: 485 RMEIISLSGYTDDEKLHIARYHLLPKIMKNNGILEDELNIDDSALIGIIRYYTREAGVRS 544
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ + R K+ E ++ + S D++
Sbjct: 545 LEREISKICRKIVRKILENSEKGEINSLIDIN---------------------------- 576
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
SN LE+ LG R+ D ++ + G GL WT GG++ +E
Sbjct: 577 ---SNN-------------LEEYLGVRRY-DFDSVDHENRIGQVTGLAWTEVGGDLLTIE 619
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ GKG + TG LG+V+KES + A T VR+R + L +D ++ RD+H+H P
Sbjct: 620 VADVSGKGNILRTGSLGEVMKESVEAARTVVRSRLSSFGL--QD--DVFDKRDMHLHVPE 675
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAG+ + TA+VS +R VR D AMTGE+TLRG VLP+GG+K+K+LAAHR G
Sbjct: 676 GATPKDGPSAGIAIATAMVSALTRIPVRCDVAMTGEITLRGEVLPIGGLKEKLLAAHRGG 735
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+K V++P N+KDL E+P ++ LEII K ++ VLE A E
Sbjct: 736 VKIVLIPNDNIKDLSEIPDSIKGRLEIIPVKWIDKVLEIALE 777
>gi|422019639|ref|ZP_16366182.1| DNA-binding ATP-dependent protease La [Providencia alcalifaciens
Dmel2]
gi|414102745|gb|EKT64335.1| DNA-binding ATP-dependent protease La [Providencia alcalifaciens
Dmel2]
Length = 809
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/782 (42%), Positives = 459/782 (58%), Gaps = 103/782 (13%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI--------------------SSLEMTK 103
P G V V++EGL R + L+ G Y+ A+ S+ E+
Sbjct: 84 PDGTVK--VLVEGLRRARITSLTDNGEYFLAQAEYLPNDSAKAAIYDDASKEPSAAELVD 141
Query: 104 IEMEQ-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLA 156
E EQ V Q +I L+++ + + +EQ Q + KLA
Sbjct: 142 -EKEQEVLYRTIVSQFESYIKLNKKIPPEVLTSLHTIEQDQ--------------LDKLA 186
Query: 157 DIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQK 216
D + + ++ +L+ ++ R+ +++ + ++V ++I +V+ Q+ KSQ+
Sbjct: 187 DTIASHMPLKLADKQRVLEMANIAERVEFLMAMMESETELLQVEKRIRNRVKKQMEKSQR 246
Query: 217 EFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQP 276
E+ L +QM+AI++ELG+ DD D+ +L+RK++ A MP + + EL++LK M P
Sbjct: 247 EYYLNEQMKAIQKELGEMDDAPDENESLKRKIEEAKMPKEAQEKAEAELQKLKMMSPMSA 306
Query: 277 GYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKP 336
T R Y++ + +PW K S+ + DL A+E LD+DHYGL RVK RI+EYLAV+
Sbjct: 307 EATVVRSYIDWMVQVPWHKRSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVS 365
Query: 337 DARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGR 396
+GP+LC VGPPGVGKTSL SIA A GR++ R++LGGV+DEA+IRGHRRTYIGSMPG+
Sbjct: 366 KIKGPILCLVGPPGVGKTSLGQSIAKATGREYTRMALGGVRDEAEIRGHRRTYIGSMPGK 425
Query: 397 LIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSK 456
LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS
Sbjct: 426 LIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSD 485
Query: 457 VIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIP 516
V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA RHL+ + ++++ L L I
Sbjct: 486 VMFVATSN-SMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLSKQIERNALKKGELSID 544
Query: 517 EAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDN 576
+ + +I+ YTREAGVR LER ++ L R A +AL L+D
Sbjct: 545 DGALMSIIRYYTREAGVRGLEREISKLCRKAV---------KAL------------LMDK 583
Query: 577 RLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVA 634
+L IT+ L+ LG RFD + RV
Sbjct: 584 KL---------------------KHIEITAD------NLKDYLGVRRFDYGHADTENRV- 615
Query: 635 APGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQ 694
G GL WT GG++ +E + GKG+L TG LG+V++ES Q ALT VRARA L
Sbjct: 616 --GQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQTALTVVRARAEKLG 673
Query: 695 LVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTL 754
+ + + RDIH+H P GA PKDGPSAG+ + TALVS + V+AD AMTGE+TL
Sbjct: 674 I----NSDFYEKRDIHVHVPEGATPKDGPSAGIAMSTALVSCLTGNPVKADVAMTGEITL 729
Query: 755 RGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQ 814
RGLVLP+GG+K+K+LAAHR GIK V++P+ N +DL E+P V+A L+I K +E+VL
Sbjct: 730 RGLVLPIGGLKEKLLAAHRGGIKTVLIPDDNKRDLEEIPQNVIADLQIHPVKTIEEVLSL 789
Query: 815 AF 816
A
Sbjct: 790 AL 791
>gi|423389219|ref|ZP_17366445.1| lon protease [Bacillus cereus BAG1X1-3]
gi|401642112|gb|EJS59825.1| lon protease [Bacillus cereus BAG1X1-3]
Length = 776
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 456/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ +++VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTV------IDEVEDDLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSSETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDM-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LVHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + + K+
Sbjct: 553 CRKAAKIIVTAERKRIVVTEKN-------------------------------------- 574
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
VVD +LG F +A E+ G++ GL +T GG+ +E + GKG
Sbjct: 575 -----VVD------LLGKHIFRYGQA-EKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|398919616|ref|ZP_10658871.1| ATP-dependent protease La [Pseudomonas sp. GM49]
gi|398169638|gb|EJM57616.1| ATP-dependent protease La [Pseudomonas sp. GM49]
Length = 798
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 328/759 (43%), Positives = 457/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S ++ E++ E++ + S
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID----EVDAPERESEVFVRS---- 129
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 130 -----LLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++++AG+P + EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEVEDLKKRIEAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQIAANGLKKGELEFDAEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A H +
Sbjct: 543 QIAKVCRKAV---------------------------------------------KEHAL 557
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
F + V MLE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 558 EKRFSVK----VTADMLEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKT 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|547865|sp|P36772.1|LON_BRECH RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|98087|pir||B42375 endopeptidase La (EC 3.4.21.53) [validated] - Bacillus brevis
gi|402504|dbj|BAA00737.1| lon protease [Brevibacillus brevis]
Length = 779
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/765 (41%), Positives = 461/765 (60%), Gaps = 89/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-----------MTKIEMEQVEQD 112
P+G T V++EGL R ++E + Y+ I+ L+ + + + EQ
Sbjct: 83 PNG--TIRVLVEGLQRAKIEEYLQKEDYFVVSITYLKEEKAEENEVEALMRSLLTHFEQ- 139
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I LS++ + + +E+ GR LAD+ + + +++
Sbjct: 140 --YIKLSKKVSPETLTSVQDIEEP----GR------------LADVIASHLPLKMKDKQE 181
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L++V+++ RL +++ + + + KI +V+ Q+ ++QKE+ LR+QM+AI++ELG
Sbjct: 182 ILETVNIQERLEILLTILNNEREVLELERKIGNRVKKQMERTQKEYYLREQMKAIQKELG 241
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D D + ++ L +++ + P I ++KEL RL+KM + R Y++ + LP
Sbjct: 242 DKDGRQGEVDELRAQLEKSDAPERIKAKIEKELERLEKMPSTSAEGSVIRTYIDTLFALP 301
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W K +E+ +LD+K A+E LD DHYGL + K+R++EYLAV+KL RGP+LC VGPPGVG
Sbjct: 302 WTKTTED-NLDIKHAEEVLDEDHYGLEKPKERVLEYLAVQKLVNSMRGPILCLVGPPGVG 360
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSLA S+A ALGR+F+RISLGGV+DEA+IRGHRRTY+G++PGR+I G+K+ G NPV L
Sbjct: 361 KTSLARSVARALGREFVRISLGGVRDEAEIRGHRRTYVGALPGRIIQGMKQAGTINPVFL 420
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK SD RGDPASALLEVLDP QN F+DHY+ +DL+ V+F+ TAN IP P
Sbjct: 421 LDEIDKLASDFRGDPASALLEVLDPNQNDKFSDHYIEETYDLTNVMFITTANSLDTIPRP 480
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPE-AMVKLVIQRYTREA 531
LLDRMEVI + GYT EKL I +L+P+ ++ HGLG + LQ+ E AM+KLV + YTREA
Sbjct: 481 LLDRMEVISISGYTELEKLNILRGYLLPKQMEDHGLGKDKLQMNEDAMLKLV-RLYTREA 539
Query: 532 GVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPM 591
GVRNL R A + R AA + E+++ + ++K
Sbjct: 540 GVRNLNREAANVCRKAAKIIVGGEKKRVVVTAK--------------------------- 572
Query: 592 GESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEV 651
LE +LG PR+ AE+ G GL WT GG+
Sbjct: 573 ----------------------TLEALLGKPRY-RYGLAEKKDQVGSVTGLAWTQAGGDT 609
Query: 652 QFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHI 711
VE + + GKG+L LTGQLGDV+KESAQ A +++R+RA++ + E + DIHI
Sbjct: 610 LNVEVSILAGKGKLTLTGQLGDVMKESAQAAFSYIRSRASEWGIDPE----FHEKNDIHI 665
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA+PKDGPSAG+T+ TALVS + V+ + MTGE+TLRG VLP+GG+K+K ++A
Sbjct: 666 HVPEGAIPKDGPSAGITMATALVSALTGIPVKKEVGMTGEITLRGRVLPIGGLKEKCMSA 725
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
HR G+ +ILP+ N KD+ ++P +V +L + +++VL A
Sbjct: 726 HRAGLTTIILPKDNEKDIEDIPESVREALTFYPVEHLDEVLRHAL 770
>gi|228941637|ref|ZP_04104184.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228974566|ref|ZP_04135132.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981161|ref|ZP_04141461.1| ATP-dependent protease La 1 [Bacillus thuringiensis Bt407]
gi|384188540|ref|YP_005574436.1| ATP-dependent protease La [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410676854|ref|YP_006929225.1| Lon protease Lon [Bacillus thuringiensis Bt407]
gi|423385971|ref|ZP_17363227.1| lon protease [Bacillus cereus BAG1X1-2]
gi|423527672|ref|ZP_17504117.1| lon protease [Bacillus cereus HuB1-1]
gi|452200931|ref|YP_007481012.1| ATP-dependent protease La Type I [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228778361|gb|EEM26628.1| ATP-dependent protease La 1 [Bacillus thuringiensis Bt407]
gi|228784969|gb|EEM32982.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228817849|gb|EEM63927.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326942249|gb|AEA18145.1| ATP-dependent protease La [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401635132|gb|EJS52889.1| lon protease [Bacillus cereus BAG1X1-2]
gi|402452171|gb|EJV83987.1| lon protease [Bacillus cereus HuB1-1]
gi|409175983|gb|AFV20288.1| Lon protease Lon [Bacillus thuringiensis Bt407]
gi|452106324|gb|AGG03264.1| ATP-dependent protease La Type I [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 776
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 313/755 (41%), Positives = 453/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVIEFIEEENVVQVSIKTV------TEEVEDDLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI Q+V+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQQVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E+I +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDI-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L++DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNNDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A + E+++
Sbjct: 553 CRKVAKIIVTAERKR--------------------------------------------- 567
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+VV E + +LG F + AE+ G++ GL +T GG+ +E + GKG
Sbjct: 568 ----IVVTEKKIVDLLGKHIFRYGQ-AEKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|238754237|ref|ZP_04615594.1| ATP-dependent protease La [Yersinia ruckeri ATCC 29473]
gi|238707484|gb|EEP99844.1| ATP-dependent protease La [Yersinia ruckeri ATCC 29473]
Length = 784
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/767 (43%), Positives = 461/767 (60%), Gaps = 89/767 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EMEQ-------VEQDPDF 115
P G V V++EGL R + LS G ++ A+ LE + E EQ + Q +
Sbjct: 84 PDGTVK--VLVEGLQRVRITTLSDSGEHFAAQAEYLESPVLDEREQEVLVRTAINQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + + ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLHSIDDAAR----------------LADTIAAHMPLKLNDKQAVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MFDITERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+++A MP + + + EL++LK M P T R Y++ + +PW
Sbjct: 246 DAPDEHEALKRKIEAAKMPKDAREKTEAELQKLKMMSPMSAEATVVRGYIDWMLQVPWNS 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S+ + DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 306 RSK-VKKDLVKAQEVLDTDHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMASDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA +HL+P+ +++ + L I ++ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKQHLLPKQFERNAIKKGELTIDDSAIISIIRYYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ L R A + N L D +E+ G++
Sbjct: 544 LEREISKLCRKA--------------------------VKNLLMDKTVKHIEI--NGDN- 574
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
L++ LG + D A RV G GL WT GG++
Sbjct: 575 -------------------LKEFLGVQKVDYGRADTENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHI 711
+E + GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHV 666
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRGLVLP+GG+K+K+LAA
Sbjct: 667 HVPEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGLVLPIGGLKEKLLAA 726
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
HR GIK V++PE N +DL E+PA V+A LEI K ++DVL A +
Sbjct: 727 HRGGIKVVLIPEDNKRDLEEIPANVIADLEIHPVKLIDDVLAIALQN 773
>gi|407979345|ref|ZP_11160162.1| class III heat-shock ATP-dependent Lon protease [Bacillus sp.
HYC-10]
gi|407414052|gb|EKF35719.1| class III heat-shock ATP-dependent Lon protease [Bacillus sp.
HYC-10]
Length = 774
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 312/763 (40%), Positives = 459/763 (60%), Gaps = 81/763 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSL---EMTKIEMEQV-----EQDPDF 115
P+G T V++EGL R ++ Y + I L E+ E E + + +
Sbjct: 82 PNG--TIRVLVEGLNRAQIESYVELEDYTSVDIKELAEEELKDAEAEALMRTLLDHFDQY 139
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I +S++ A ++ +E+ GR +ADI + + +++ +L+
Sbjct: 140 IKISKKISAETYATVTDIEEP----GR------------MADIVASHLPLKLKDKQEVLE 183
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+VD+K RL++ L+ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELGD +
Sbjct: 184 TVDVKKRLNRVISLIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELGDKE 243
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
++ +L K++ + MP ++ + KEL R +K+ + R Y++ + +LPW
Sbjct: 244 GKTGEVSSLMAKIEESSMPDSVRETALKELNRYEKIPSSSAESSVIRNYIDWLINLPWGI 303
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+E+ LDLK A E LD +H+GL +VK+R++EYLAV+KL +GP+LC GPPGVGKTS
Sbjct: 304 YTED-RLDLKLASEILDEEHHGLEKVKERVLEYLAVQKLTNSLKGPILCLAGPPGVGKTS 362
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
LA SIA +L RKFIRISLGGV+DE++IRGHRRTY+G+MPGR+I G+ + G NPV LLDE
Sbjct: 363 LAKSIAKSLDRKFIRISLGGVRDESEIRGHRRTYVGAMPGRIIRGMSKAGTMNPVFLLDE 422
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD RGDP+SA+LEVLDPEQN F+DHY+ FDLS+V+F+ATAN IP PL D
Sbjct: 423 IDKMSSDFRGDPSSAMLEVLDPEQNHNFSDHYIEETFDLSQVLFIATANNLATIPGPLRD 482
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+I + GYT EK I HL+P+ L +HGL LQ+ EA + +I+ YTREAGVR
Sbjct: 483 RMEIITIAGYTEVEKAEIVKDHLLPKQLKEHGLKKGNLQLREAAIYDIIRYYTREAGVRG 542
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER LAA+ R AA + +++++ + K++ S L RL
Sbjct: 543 LERQLAAICRKAAKAIVAEDRKRITVTEKNL----SEYLGKRLY---------------- 582
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
R+ E ++V G+ GL +T+ GG+ +E
Sbjct: 583 ---------------------------RYGQAETTDQV---GVVTGLAYTSVGGDTLSIE 612
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ GKG+L LTG+LGDV++ESAQ A +++R++A DL + + + DIHIH P
Sbjct: 613 VSLSPGKGKLLLTGKLGDVMRESAQAAFSYIRSKADDLNI----DPHFNEKHDIHIHVPE 668
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GAVPKDGPSAG+T+ TALVS + + V D MTGE+TLRG VLP+GG+K+K L AHR G
Sbjct: 669 GAVPKDGPSAGITIATALVSALTGRPVSRDVGMTGEITLRGRVLPIGGLKEKALGAHRAG 728
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
+K +ILP+ N KD+ ++P +V L I +++VLE+A G
Sbjct: 729 LKTIILPKDNEKDIDDIPESVREGLTFIPVSHVDEVLEKALVG 771
>gi|220927145|ref|YP_002502447.1| ATP-dependent protease La [Methylobacterium nodulans ORS 2060]
gi|219951752|gb|ACL62144.1| ATP-dependent protease La [Methylobacterium nodulans ORS 2060]
Length = 806
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 332/794 (41%), Positives = 465/794 (58%), Gaps = 86/794 (10%)
Query: 30 QVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRG 89
QV A+D + I+ G A L L ++ P G V V++EG R ++
Sbjct: 62 QVNATDDDPATDAIY--TIGTLASVLQL---LKLPDGTVK--VLVEGAGRAKIRSFVRSD 114
Query: 90 TYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLL 147
+Y A +L P+ + + +A A +IS E K + +V+
Sbjct: 115 EFYAAEAETL-------------PNDLGDRIEAEALARSVISEFENYVKLNKKISPEVVS 161
Query: 148 ETVPI---HKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKIT 204
+ I KLAD + + ++ +L+ + RL + L++ + ++V ++I
Sbjct: 162 AVIQIDEPSKLADTVASHLAVKISDKQAILEIPTVAERLERVLSLMESEISVLQVEKRIR 221
Query: 205 QKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKE 264
+V+ Q+ K+Q+E+ L +QM+AI++ELGD +D D+L LE K++ + E
Sbjct: 222 TRVKRQMEKTQREYYLNEQMKAIQKELGD-EDGRDELAELEDKIEKTKLSKEARDKAMAE 280
Query: 265 LRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQR 324
L++L++M P T R YL+ + +PW K S+ I DL A+ LD+DH+GL +VK+R
Sbjct: 281 LKKLRQMSPMSAEATVVRNYLDWMLGIPWGKRSK-IKKDLVGAQNLLDADHFGLDKVKER 339
Query: 325 IIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRG 384
I+EYLAV++ GP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRG
Sbjct: 340 IVEYLAVQQRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRG 399
Query: 385 HRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFN 444
HRRTYIGSMPG+++ +++ NP++LLDEIDK G D RGDP++ALLEVLDPEQN +FN
Sbjct: 400 HRRTYIGSMPGKIVQSMRKAKTSNPLILLDEIDKMGMDFRGDPSAALLEVLDPEQNASFN 459
Query: 445 DHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLD 504
DHYL V +DLS V+FV TAN IPP LLDRMEVI + GYT EEK+ IA RHLIP L
Sbjct: 460 DHYLEVDYDLSNVMFVTTANTLN-IPPALLDRMEVIRIAGYTEEEKVEIARRHLIPNALK 518
Query: 505 QHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSK 564
+HGLG + I + + L+I+RYTREAGVRNLER L+ L R AVK
Sbjct: 519 KHGLGEKEWSITDDGLMLLIRRYTREAGVRNLERELSNLIR-KAVK-------------- 563
Query: 565 DVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRF 624
E+ + + T V N ++ LGP RF
Sbjct: 564 --------------------EILISKVASVTVSVDN--------------MDSFLGPARF 589
Query: 625 --DDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIA 682
+ E ++V G+ GL WT GGE+ +E M GKG++ +TG L DV+KES A
Sbjct: 590 RYGEVETDDQV---GVVTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLRDVMKESISAA 646
Query: 683 LTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRV 742
++VR+RA D + L + RDIH+H P GA PKDGPSAG+ + TA+VS+ S V
Sbjct: 647 ASYVRSRAVDFGVEPP----LFERRDIHVHVPEGATPKDGPSAGIAMATAIVSVISGIPV 702
Query: 743 RADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEI 802
R D AMTGE+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL ++PA+V LEI
Sbjct: 703 RRDIAMTGEVTLRGRVLPIGGLKEKLLAALRGGIKTVLIPEENAKDLADIPASVKNGLEI 762
Query: 803 ILAKRMEDVLEQAF 816
+ RM+ VL++A
Sbjct: 763 VPVSRMDQVLQKAL 776
>gi|228917108|ref|ZP_04080666.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|423549791|ref|ZP_17526118.1| lon protease [Bacillus cereus ISP3191]
gi|228842526|gb|EEM87616.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|401190379|gb|EJQ97424.1| lon protease [Bacillus cereus ISP3191]
Length = 776
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 454/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTV------TEEVEADLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ + +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIISVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW A+E++ +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYMDWLLALPWTDATEDM-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKSVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLQEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + + K+
Sbjct: 553 CRKAAKIIVTAERKRIVVTEKN-------------------------------------- 574
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
VVD +LG F +A E+ G++ GL +T GG+ +E + GKG
Sbjct: 575 -----VVD------LLGKHIFRYGQA-EKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|289679417|ref|ZP_06500307.1| ATP-dependent protease La [Pseudomonas syringae pv. syringae FF5]
gi|440721404|ref|ZP_20901803.1| ATP-dependent protease La [Pseudomonas syringae BRIP34876]
gi|440724451|ref|ZP_20904733.1| ATP-dependent protease La [Pseudomonas syringae BRIP34881]
gi|443644726|ref|ZP_21128576.1| ATP-dependent protease La [Pseudomonas syringae pv. syringae B64]
gi|440363825|gb|ELQ00984.1| ATP-dependent protease La [Pseudomonas syringae BRIP34876]
gi|440370095|gb|ELQ07041.1| ATP-dependent protease La [Pseudomonas syringae BRIP34881]
gi|443284743|gb|ELS43748.1| ATP-dependent protease La [Pseudomonas syringae pv. syringae B64]
Length = 798
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 330/777 (42%), Positives = 459/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A ++ +E
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALIE----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALTKANAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL + E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEISFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKAV-------------------------------- 552
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
H + F + V MLE LG +F AE+ G
Sbjct: 553 -------------KEHAMEKRFAVQ----VTADMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|398948871|ref|ZP_10672973.1| ATP-dependent protease La [Pseudomonas sp. GM33]
gi|398160045|gb|EJM48327.1| ATP-dependent protease La [Pseudomonas sp. GM33]
Length = 798
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 328/759 (43%), Positives = 456/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S ++ E++ E++ + S
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID----EVDAPERESEVFVRS---- 129
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 130 -----LLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEVEDLKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQITANGLKKGELEFDAEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A H +
Sbjct: 543 QIAKVCRKAV---------------------------------------------KEHAL 557
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
F + V MLE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 558 EKRFSVK----VTADMLEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKT 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|376295041|ref|YP_005166271.1| ATP-dependent protease La [Desulfovibrio desulfuricans ND132]
gi|323457602|gb|EGB13467.1| ATP-dependent protease La [Desulfovibrio desulfuricans ND132]
Length = 820
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 292/669 (43%), Positives = 429/669 (64%), Gaps = 56/669 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD + +I F + +L+ +D RL + EL+ ++ + + +++ +V+ Q+ K
Sbjct: 178 QLADQIMPHLKIDFSRKQEILEELDPNRRLERVYELLLGEIEIVSIEKRVKGRVKDQMEK 237
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+Q+E+ L +Q++AI +E+G +DD + + LE ++ + M + V+KE+++++ MQ
Sbjct: 238 NQREYYLNEQVKAINKEMGRDDDPQAEAQELEAQLDAKPMSQENRERVRKEIKKMRTMQS 297
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
YT R Y++ + DLPW+ ++ D+D+ A+ LD DHYGL + K+RI+EYLAV+
Sbjct: 298 SSAEYTVVRNYIDWVLDLPWDNYKDDKDVDIARARAILDEDHYGLEKPKERILEYLAVQT 357
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LCFVGPPGVGKTS+A SIA ++ R+F+R+SLGGV+DEA+IRGHRRTY+G+M
Sbjct: 358 LVETMKGPILCFVGPPGVGKTSIARSIARSMDREFLRLSLGGVRDEAEIRGHRRTYVGAM 417
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG++I LKRV NPV+ LDE+DK +D RGDP++ALLEVLDPEQN FNDHYL++ +D
Sbjct: 418 PGKIIQSLKRVKFNNPVICLDEVDKMSADFRGDPSAALLEVLDPEQNYAFNDHYLDLDYD 477
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV F+ TAN + IP PL DRME+I LPGY EK+ IA L+P+ + QHGL E L
Sbjct: 478 LSKVFFITTANSLEGIPLPLQDRMEIIRLPGYLETEKVEIAKGFLVPKQIKQHGLKPENL 537
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+I + + V++ YT+EAGVRNLER +A++ R +A+++ E
Sbjct: 538 KISDNAILDVVRYYTKEAGVRNLEREIASICRKSAMRIVED------------------- 578
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
H+ +I+ + L+K+LG ++ ER
Sbjct: 579 ----------------------HDRDKVIQIS------KQSLQKILGVTKY---TYGERE 607
Query: 634 AAP--GISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
P G+ GL WT GGE+ VE M GKG++ +TG+LGDV++ESA+ A++++R+R +
Sbjct: 608 EEPQVGVCNGLAWTQLGGEMLLVEVVLMPGKGKVEITGKLGDVMQESARAAVSYIRSR-S 666
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
DL + D L+ DIHIH P GA PKDGPSAGVTL TAL+S VR D AMTGE
Sbjct: 667 DLLGLKPDFYKLI---DIHIHVPDGATPKDGPSAGVTLTTALISALLNIPVRNDLAMTGE 723
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+++K+LAAHR IK V++P N K+L +VP +L LE+I K M+ V
Sbjct: 724 ITLRGRVLPIGGLREKLLAAHRGLIKTVLIPAENEKNLQDVPKDILKDLEVIPVKTMDQV 783
Query: 812 LEQAFEGGC 820
+++A EGG
Sbjct: 784 IDKALEGGS 792
>gi|23099531|ref|NP_692997.1| ATP-dependent proteinase La 1 [Oceanobacillus iheyensis HTE831]
gi|22777761|dbj|BAC14032.1| ATP-dependent proteinase La 1 (class III heat-shock protein)
[Oceanobacillus iheyensis HTE831]
Length = 772
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 309/762 (40%), Positives = 456/762 (59%), Gaps = 82/762 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVE--------QDPDF 115
P+G T V++EG+ R + Y + LE TK E ++E +
Sbjct: 81 PNG--TNRVLVEGMYRGKLIRHIDSENEYLVEVEKLEETKSEENEIEALMRTLLDYFKQY 138
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ +SR+ E + +E GR L+DI + + E+ +L+
Sbjct: 139 VKVSRKVTEDTFESVGDIEDP----GR------------LSDIITSHIALKVPEKQKLLE 182
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
++++ R+ K +++ + + + +KI Q+V+ + K+QKE+ LR+Q++AI++ELG+ D
Sbjct: 183 TLNINERIKKLLKIISNEKKVLDIEKKIGQRVKSSMEKTQKEYYLREQLKAIQKELGERD 242
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSS-RVYLELIADLPWE 294
DL L K++ + MP +I KEL R +K+ PQ +S R Y+E + LPW+
Sbjct: 243 GKATDLDQLHSKIEKSDMPDHIRNVALKELGRYEKV-PQSSAESSVIRNYIEWLIALPWQ 301
Query: 295 KASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKT 354
+++ ++++K A++ L+ DHYGL +VK+RI+EYLAV+KL +GP+LC VGPPGVGKT
Sbjct: 302 NKTKD-NINIKKAEKVLNRDHYGLDKVKERILEYLAVQKLTNSIKGPILCLVGPPGVGKT 360
Query: 355 SLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLD 414
SLA SI++++ RKF+RISLGGV+DEA+IRGHRRTYIG+MPGR++ G+K+ NPV LLD
Sbjct: 361 SLAKSISNSINRKFVRISLGGVRDEAEIRGHRRTYIGAMPGRIMQGMKKAETINPVFLLD 420
Query: 415 EIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLL 474
EIDK +D RGDP+SA+LEVLDPEQN F+DH++ +DLS V+F+ATAN IP PLL
Sbjct: 421 EIDKMSNDFRGDPSSAMLEVLDPEQNHAFSDHFIEETYDLSNVLFIATANNVSSIPEPLL 480
Query: 475 DRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVR 534
DRME+I + GYT EKL IA HLIP+ L ++GL LQ+ E V +I+RYTREAGVR
Sbjct: 481 DRMELISIAGYTEVEKLHIAKEHLIPKQLQENGLTKSKLQMRETAVMKLIRRYTREAGVR 540
Query: 535 NLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGES 594
LER +A L R AA +
Sbjct: 541 GLERQIATLCRKAAKTL------------------------------------------- 557
Query: 595 THEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFV 654
+++T + +++ E +E LG P F E+ G + GL +T+ GG++ +
Sbjct: 558 ---ITDTSK--ERIIITEHTIEDYLGKPYF-RYGLMEQENQIGAATGLAYTSAGGDILSI 611
Query: 655 EATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFP 714
E + GKG+L LTGQLGDV++ESAQ A ++VR+R + + + DIHIH P
Sbjct: 612 EVSHYPGKGKLTLTGQLGDVMQESAQAAFSYVRSRTNHFHIEP----DFYEKYDIHIHVP 667
Query: 715 AGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRY 774
AGA PKDGPSAG+T+ TALVS + + ++ + MTGE+TLRG VLP+GG+K+K L+AHR
Sbjct: 668 AGATPKDGPSAGITIATALVSSLTGRAIKKEVGMTGEITLRGRVLPIGGLKEKALSAHRA 727
Query: 775 GIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
G+ +I+P+ N KD+ +P +V L I K +++VLEQA
Sbjct: 728 GLTTIIIPDENEKDIENIPESVRNELTFIPVKHLDEVLEQAL 769
>gi|410456502|ref|ZP_11310362.1| anti-sigma H sporulation factor LonB [Bacillus bataviensis LMG
21833]
gi|409927886|gb|EKN65011.1| anti-sigma H sporulation factor LonB [Bacillus bataviensis LMG
21833]
Length = 775
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 303/769 (39%), Positives = 464/769 (60%), Gaps = 91/769 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE-----------MTKIEMEQVEQD 112
P+G + V++EGL R + + YY+ I + + + + ++ EQ
Sbjct: 82 PNGTIR--VLVEGLNRAEIVAIYDDEDYYSVSIVTYDDPDTKDVEDQALMRTMLDYFEQ- 138
Query: 113 PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLV 172
+I LS++ A ++ +E+ GR +ADI + I +E+
Sbjct: 139 --YIKLSKKISAETYASVADIEEP----GR------------MADIIASHLPIKLKEKQE 180
Query: 173 MLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELG 232
+L+ +D+K R++ + + + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELG
Sbjct: 181 ILEMIDIKERVNSVIDTIHNEKEVLNLEKKIGQRVKRSMERTQKEYYLREQMKAIQKELG 240
Query: 233 DNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLP 292
D + ++ L +K++ AGMP + K KEL R +K+ R Y++ + +P
Sbjct: 241 DKEGKTGEIADLTKKIEQAGMPEHALKAAMKELDRYEKVPTSSAESAVIRNYIDWLISIP 300
Query: 293 WEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVG 352
W K +E+ D+D+ A++ L+ DHYGL +VK+R++EYLAV+KL +GP+LC GPPGVG
Sbjct: 301 WSKKTED-DIDILRAEKILNQDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLAGPPGVG 359
Query: 353 KTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVML 412
KTSLA S+A++L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV L
Sbjct: 360 KTSLARSVATSLNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGTINPVFL 419
Query: 413 LDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPP 472
LDEIDK SD RGDP+SA+LEVLDPEQN F+DHY+ +DLSKV+F+ATAN IP P
Sbjct: 420 LDEIDKMSSDFRGDPSSAMLEVLDPEQNHNFSDHYIEETYDLSKVMFIATANNLSTIPGP 479
Query: 473 LLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAG 532
LLDRME+I + GYT EK+ I HL+P+ + ++GL LQ+ + + V++ YTREAG
Sbjct: 480 LLDRMEIITIAGYTELEKVHICRDHLLPKQIKENGLTKGILQVRDDAILKVVRYYTREAG 539
Query: 533 VRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMG 592
VR+LER +A + R A + E+++ + + K+V
Sbjct: 540 VRSLERQMATICRKTAKIIVSGEKKRVIITEKNV-------------------------- 573
Query: 593 ESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDD--REAAERVAAPGISVGLVWTNFGGE 650
E+ LG RF EA ++V G++ GL +T GG+
Sbjct: 574 -----------------------EEFLGKTRFHYGMAEAEDQV---GVATGLAYTTVGGD 607
Query: 651 VQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIH 710
+E + GKG+L LTG+LGDV+KESAQ A +++R++A L + ED + DIH
Sbjct: 608 TLQIEVSLSPGKGKLVLTGKLGDVMKESAQAAFSYIRSKAGVLG-IDED---FHEKYDIH 663
Query: 711 IHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILA 770
IH P GAVPKDGPSAG+T+ TALVS + + +R + MTGE+TLRG VLP+GG+K+K L+
Sbjct: 664 IHVPEGAVPKDGPSAGITMATALVSALTGRPIRKEVGMTGEITLRGRVLPIGGLKEKTLS 723
Query: 771 AHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGG 819
AHR G+ ++ILP+ N+KD+ ++P ++ LE + +++VL+ A G
Sbjct: 724 AHRAGLTKIILPKDNVKDIDDIPESIRNDLEFVPVSHVDEVLKHALLEG 772
>gi|388547447|ref|ZP_10150712.1| ATP-dependent protease La [Pseudomonas sp. M47T1]
gi|388274534|gb|EIK94131.1| ATP-dependent protease La [Pseudomonas sp. M47T1]
Length = 798
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 309/664 (46%), Positives = 425/664 (64%), Gaps = 56/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+L D A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +
Sbjct: 160 RLVDTMAAHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMER 219
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELGD+D+ +++ L++++ +AG+P + EL +LK+M P
Sbjct: 220 SQREYYLNEQMKAIQKELGDSDEGHNEVEELKKRIDAAGLPKDALAKATAELNKLKQMSP 279
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + +PW KA ++ LDL A++ LD+DHYGL VK+RI+EYLAV+K
Sbjct: 280 MSAEATVVRSYIDWLVQVPW-KAQSKVRLDLARAEDILDADHYGLEEVKERILEYLAVQK 338
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
RGPVLC VGPPGVGKTSLA SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 339 RVKKIRGPVLCLVGPPGVGKTSLAESIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSM 398
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGRLI + +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +D
Sbjct: 399 PGRLIQKMTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYD 458
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+F+ T+N + IPP LLDRMEVI LPGYT +EK+ IA ++L P+ + +GL L
Sbjct: 459 LSDVMFLCTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIATKYLSPKQIAANGLKKGEL 517
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
++ A ++ +I+ YTREAGVR LER LA + R KV ++ ++D H
Sbjct: 518 EVDVAAIRDIIRYYTREAGVRGLERQLAKVCR----KVVKEH-------ARDKH------ 560
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
+ ++TS LE LG +F AE+
Sbjct: 561 --------------------------FSVKVTSD------SLEHFLGVRKF-RYGLAEQQ 587
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GGE+ +EA + GKG+L TG LGDV+ ES ALT VR+RA L
Sbjct: 588 DQIGQVTGLAWTQVGGELLTIEAAVVPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSL 647
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ ++ + RD HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+T
Sbjct: 648 GI----PLDFHEKRDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEIT 703
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VL +GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+
Sbjct: 704 LRGQVLAIGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQ 763
Query: 814 QAFE 817
A +
Sbjct: 764 IALQ 767
>gi|374262731|ref|ZP_09621294.1| ATP-dependent protease La [Legionella drancourtii LLAP12]
gi|363536955|gb|EHL30386.1| ATP-dependent protease La [Legionella drancourtii LLAP12]
Length = 813
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 329/764 (43%), Positives = 463/764 (60%), Gaps = 74/764 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R V+E S Y A SLE+ E+ Q+P+ L R
Sbjct: 91 PDGTVK--VLVEGEQRARVKEYSQEKGYLEA---SLEIMD-EVNTAVQEPEVGILMRS-- 142
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ K + +VL I +LAD A + +++ +L+++D
Sbjct: 143 -----LMSQFEQYIKLNKKIPPEVLSPLAGIEEPGRLADTIAAHLTLKVDDKQELLETLD 197
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL + ++ + + V +++ +V+ Q+ KSQ+E+ L +QM+AI++ELG+ ++
Sbjct: 198 VGTRLERLMSAIETEIDLLHVEKRVRGRVKRQMEKSQREYYLNEQMKAIQKELGEMGEEG 257
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ LE+ ++ AGMP + EL +LK M P T R YL+ + +PW+K S+
Sbjct: 258 NEIEQLEKSIEKAGMPKEAKEKSMAELHKLKMMSPMSAEATVIRNYLDWMLLVPWKKKSK 317
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
I DL A++ LD +H+GL RVK+RIIEYLAV+K +GP+LC VGPPGVGKTSL
Sbjct: 318 -IQFDLLKAEKLLDKEHHGLERVKERIIEYLAVQKRVKRLKGPILCLVGPPGVGKTSLGQ 376
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA+A GR FIRI+LGGV+DEA+IRGHRRTYIGSMPG++I L + GV NP+++LDE+DK
Sbjct: 377 SIANATGRTFIRIALGGVRDEAEIRGHRRTYIGSMPGKIIQKLCKAGVKNPLIMLDEVDK 436
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
D RGDPASALLEVLDPEQN TF+DHYL V +DLS V+F+ATAN + IP PLLDRME
Sbjct: 437 MAMDFRGDPASALLEVLDPEQNHTFSDHYLEVDYDLSDVMFIATANSLE-IPAPLLDRME 495
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
+I L GYT +EK+ IA ++L+P+ + +GL ++ + I E ++ +I+ YTREAGVRNLER
Sbjct: 496 IIRLAGYTEDEKVSIAEQYLVPKQISLNGLNNDEIHISEGAIREIIRHYTREAGVRNLER 555
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
++A++ R KD+ P
Sbjct: 556 DIASVCRKVV---------------KDILSSKKP-------------------------- 574
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
++V +EK LG +F AE G GL WT+ GGE+ +EA+
Sbjct: 575 -------KKMIVTLNNIEKYLGVKKF-RYGLAEEFDQVGQVTGLAWTSVGGELLTIEASM 626
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG++ TGQLG+V++ES A+T VR+RA L L A+D D HIH P GA
Sbjct: 627 VPGKGKVTHTGQLGEVMQESIHAAMTVVRSRAKKLGL-ADD---FYDKNDFHIHVPEGAT 682
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + T LVS+ ++ V+AD AMTGE+TLRG VLP+GG+K+K+LAAHR GIK
Sbjct: 683 PKDGPSAGVGMCTVLVSVVTQIPVKADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKH 742
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEGGCPW 822
VI+PE N+KDL E+P +L + + K ++ VLE A + PW
Sbjct: 743 VIIPEENVKDLEEIPDNILRKITVHPVKTIDQVLELALQ-RSPW 785
>gi|422640408|ref|ZP_16703835.1| ATP-dependent protease La [Pseudomonas syringae Cit 7]
gi|440746732|ref|ZP_20926012.1| ATP-dependent protease La [Pseudomonas syringae BRIP39023]
gi|22532108|gb|AAM97840.1|AF447727_2 Lon protease [Pseudomonas syringae]
gi|330952799|gb|EGH53059.1| ATP-dependent protease La [Pseudomonas syringae Cit 7]
gi|440370992|gb|ELQ07857.1| ATP-dependent protease La [Pseudomonas syringae BRIP39023]
Length = 798
Score = 560 bits (1444), Expect = e-156, Method: Compositional matrix adjust.
Identities = 330/777 (42%), Positives = 459/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A +S ++
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVSLID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALTKANAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL + E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEISFDEDAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKAV-------------------------------- 552
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
H + F + V MLE LG +F AE+ G
Sbjct: 553 -------------KEHAMEKRFAVQ----VTADMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|49478648|ref|YP_038520.1| endopeptidase La (ATP-dependent protease La 1) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|49330204|gb|AAT60850.1| endopeptidase La (ATP-dependent protease La 1) [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 776
Score = 560 bits (1444), Expect = e-156, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 454/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTV------TEEVEADVEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ + +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIISVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW A+E++ +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYMDWLLALPWTDATEDM-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKSVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLQEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + + K+
Sbjct: 553 CRKAAKIIVTAERKRIVVTEKN-------------------------------------- 574
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
VVD +LG F +A E+ G++ GL +T GG+ +E + GKG
Sbjct: 575 -----VVD------LLGKHIFRYGQA-EKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|238919014|ref|YP_002932528.1| ATP-dependent protease La, putative [Edwardsiella ictaluri 93-146]
gi|238868582|gb|ACR68293.1| ATP-dependent protease La, putative [Edwardsiella ictaluri 93-146]
Length = 784
Score = 560 bits (1444), Expect = e-156, Method: Compositional matrix adjust.
Identities = 327/759 (43%), Positives = 457/759 (60%), Gaps = 75/759 (9%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG+ R + LS G ++ A+ L+ EM++ EQ+ QF+
Sbjct: 84 PDGTVK--VLVEGIQRARITTLSDGGEHFAAQAEYLDTP--EMDEREQEVLVRTAINQFE 139
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVP-IHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
++ +K L ++ +LAD A + ++ +L+ D+ R
Sbjct: 140 G-------YIKLNKKIPPEVLTSLNSIDDAARLADTIAAHMPLKLNDKQTVLEMSDVAER 192
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ DD D+
Sbjct: 193 LEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMDDAPDEFE 252
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
AL+RK+++A MP + EL++LK M P T R Y++ I +PW A ++
Sbjct: 253 ALKRKIEAAKMPKEARAKAESELQKLKMMSPMSAEATVVRSYIDWIVQVPWH-ARSKVKK 311
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
DL A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTSL SIA
Sbjct: 312 DLCKAQETLDADHYGLERVKDRILEYLAVQSRVSKIKGPILCLVGPPGVGKTSLGQSIAR 371
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
A GR+++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDEIDK SD
Sbjct: 372 ATGRQYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVRNPLFLLDEIDKMSSD 431
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLDRMEVI L
Sbjct: 432 MRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLDRMEVIRL 490
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
GYT +EKL IA +HL+P+ ++++ L L + ++ + +I+ YTREAGVR LER ++
Sbjct: 491 SGYTEDEKLNIARQHLLPKQIERNALKKGELTVDDSAIIGIIRYYTREAGVRALEREISK 550
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
L R A ++ LLD L
Sbjct: 551 LCRKAVKQL---------------------LLDKSLRH---------------------- 567
Query: 603 RITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
+V++ L+ LG R D ++ RV G GL WT GG++ +E +
Sbjct: 568 -----IVINGDSLKDYLGVQRCDYGRADSENRV---GQVTGLAWTEVGGDLLTIETACVP 619
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN--LLQGRDIHIHFPAGAV 718
GKG+L TG LG+V++ES Q ALT VRARA L G+N + RDIH+H P GA
Sbjct: 620 GKGKLTYTGSLGEVMQESIQAALTVVRARADKL------GINPDFYEKRDIHVHVPEGAT 673
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR GIK
Sbjct: 674 PKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKT 733
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
V++P+ N +DL E+P VL L+I K +++VL A +
Sbjct: 734 VLIPDDNKRDLEEMPENVLRDLDIHPVKWIDEVLALALQ 772
>gi|115374881|ref|ZP_01462154.1| ATP-dependent protease La [Stigmatella aurantiaca DW4/3-1]
gi|310820097|ref|YP_003952455.1| ATP-dependent protease la 1 [Stigmatella aurantiaca DW4/3-1]
gi|115368099|gb|EAU67061.1| ATP-dependent protease La [Stigmatella aurantiaca DW4/3-1]
gi|309393169|gb|ADO70628.1| ATP-dependent protease La 1 [Stigmatella aurantiaca DW4/3-1]
Length = 819
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 331/781 (42%), Positives = 465/781 (59%), Gaps = 81/781 (10%)
Query: 41 EVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLE 100
++ H+ G + L L G K V++EG+ R V++ T ++ +
Sbjct: 79 DIFHFGTVGHVIQLLPLPDGTVK--------VLVEGVRRAKVRKFLTNDAFF------MV 124
Query: 101 MTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KL 155
+ E E+ + AL R SV E K R ++L++ I +L
Sbjct: 125 EVEEVEEHTEKTVELEALVRSVH-------SVFEAFVKLNKRIPPEMLMQVASIDDPARL 177
Query: 156 ADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQ 215
AD VA + ++ +L++ RL K EL+ ++ ++V +KI +V+ Q+ K+Q
Sbjct: 178 ADTIVAHLSLKLNDKQALLETESPAKRLEKLYELMQGEIEILQVEKKIRTRVKKQMEKTQ 237
Query: 216 KEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQ 275
KE+ L +QM+AI++ELG+ D+ ++++ +E K+++ M V+KEL++L+ M P
Sbjct: 238 KEYYLNEQMQAIQKELGERDEFKNEIQEIEEKLKNKRMSKEATLKVKKELKKLRMMSPMS 297
Query: 276 PGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK 335
T R Y++ I LPW +++ LD+ A++ L+ DHYGL + K+RI+EYLAV++L
Sbjct: 298 AEATVVRNYIDWIISLPWYDETQD-RLDVTEAEQVLNEDHYGLKKPKERILEYLAVQQLV 356
Query: 336 PDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPG 395
+GPVLCFVGPPGVGKTSLA SIA A GRKF+R+SLGGV+DEA+IRGHRRTYIG+MPG
Sbjct: 357 KKLKGPVLCFVGPPGVGKTSLARSIARATGRKFVRLSLGGVRDEAEIRGHRRTYIGAMPG 416
Query: 396 RLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLS 455
+LI LK+ G NPV LLDEIDK +D RGDP++ALLEVLDPEQN FNDHYL++ +DLS
Sbjct: 417 KLIQSLKKAGSNNPVFLLDEIDKMSTDFRGDPSAALLEVLDPEQNHNFNDHYLDLDYDLS 476
Query: 456 KVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQI 515
KV+F+ TAN IP PL DRMEVI + GYT EKL IA R+LIP+ + +GL + I
Sbjct: 477 KVMFICTANTMHNIPGPLQDRMEVIRIAGYTEPEKLSIARRYLIPKEQEANGLVDVKVDI 536
Query: 516 PEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLD 575
+K +I RYTRE+GVR+LER + + R A +DV + G
Sbjct: 537 SNEALKTIIHRYTRESGVRSLEREIGGVFRKIA---------------RDVLKNGK---- 577
Query: 576 NRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAA 635
L VD M K LG PR+ AER
Sbjct: 578 ------------------------------RDLAVDRKMAMKFLGTPRY-RYGVAEREDQ 606
Query: 636 PGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQL 695
GI GL WT GGE+ EAT M GKG+L +TG+LG+V++ESAQ A+++VR+RA +
Sbjct: 607 VGIVTGLAWTEMGGEILTTEATIMPGKGKLIITGKLGEVMQESAQAAMSYVRSRAERFGI 666
Query: 696 VAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLR 755
+ + DIH+H P GA+PKDGPSAGVT+ TALVS +R VR D AMTGE+TLR
Sbjct: 667 ----DRKVFENYDIHVHLPEGAIPKDGPSAGVTICTALVSALTRVTVRKDVAMTGEITLR 722
Query: 756 GLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQA 815
G VLP+GG+K+K LAAHR GIK V++P+ N KDL ++P + +L I+ + ++DVL +A
Sbjct: 723 GRVLPIGGLKEKTLAAHRAGIKTVLIPKENRKDLKDIPKKIRMALRIVPVEFVDDVLREA 782
Query: 816 F 816
Sbjct: 783 L 783
>gi|423417612|ref|ZP_17394701.1| lon protease [Bacillus cereus BAG3X2-1]
gi|401107190|gb|EJQ15143.1| lon protease [Bacillus cereus BAG3X2-1]
Length = 776
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 456/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ +++VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTV------IDEVEDDLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 254 LREKIEQSGMPEETSKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDM-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LVHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + + K+
Sbjct: 553 CRKAAKIIVTAERKRIVVTEKN-------------------------------------- 574
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
VVD +LG F +A E+ G++ GL +T GG+ +E + GKG
Sbjct: 575 -----VVD------LLGKHIFRYGQA-EKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|229019695|ref|ZP_04176502.1| ATP-dependent protease La 1 [Bacillus cereus AH1273]
gi|229025934|ref|ZP_04182326.1| ATP-dependent protease La 1 [Bacillus cereus AH1272]
gi|228735380|gb|EEL85983.1| ATP-dependent protease La 1 [Bacillus cereus AH1272]
gi|228741602|gb|EEL91795.1| ATP-dependent protease La 1 [Bacillus cereus AH1273]
Length = 773
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 455/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ ++VE D + AL R
Sbjct: 81 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTV------TDEVEDDLEEKALMRTLL 132
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 133 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 190
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 191 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 250
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 251 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDM-ID 309
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 310 LVHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 369
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 370 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 429
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 430 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 489
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 490 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 549
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + + K+
Sbjct: 550 CRKAAKIIVTAERKRIVVTEKN-------------------------------------- 571
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
VVD +LG F +A E+ G++ GL +T GG+ +E + GKG
Sbjct: 572 -----VVD------LLGKHIFRYGQA-EKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 619
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 620 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 675
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 676 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 735
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 736 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 770
>gi|313674921|ref|YP_004052917.1| ATP-dependent protease la [Marivirga tractuosa DSM 4126]
gi|312941619|gb|ADR20809.1| ATP-dependent protease La [Marivirga tractuosa DSM 4126]
Length = 831
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/771 (40%), Positives = 466/771 (60%), Gaps = 73/771 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G AR L + + P G T ++++G +F V+E+ + + T E++
Sbjct: 104 GTVARILKM---IVLPDGNTT--IIIQGKQKFEVKEIVQEDPFLVS-------TYQELDD 151
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS---FEI 165
E DP + ++ +L+ + +V L+ + F++S E+
Sbjct: 152 EELDPKLKSNKAVIQSLKDAASKILKLNPEIPQEAQVALDNIENPNFLTHFLSSNINSEV 211
Query: 166 SFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMR 225
+ +++L L+ + K R + E + + +Q + + +I +KV + + Q+++ LRQQ+R
Sbjct: 212 ADKQKL--LEKTNAKERATLLLEFMLKDIQMLELKNEIHKKVHTDIDQQQRDYFLRQQIR 269
Query: 226 AIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYL 285
+++ELG + D++ L L K Q P N+ KH KE+ +L ++ PQ Y + Y+
Sbjct: 270 VLQDELGQDSPDQE-LDNLRLKAQEKNWPENVQKHFDKEIDKLSRINPQAAEYPVAMNYV 328
Query: 286 ELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCF 345
EL+ +LPW + +++ + DLK AK+ LD DHYGL +VK+RIIEYLAV KLK D + P+LC
Sbjct: 329 ELLLELPWRELTKD-NFDLKRAKKILDRDHYGLEKVKERIIEYLAVLKLKQDMKAPILCL 387
Query: 346 VGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVG 405
GPPGVGKTSL SI+ ALGRK++R+SLGGV DEA+IRGHR+TY+G+MPG+++ +K+ G
Sbjct: 388 YGPPGVGKTSLGKSISDALGRKYVRMSLGGVHDEAEIRGHRKTYVGAMPGKIVQNMKKAG 447
Query: 406 VCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANR 465
NPV +LDEIDK SD RGDP+SALLEVLDPEQN+TF D+YL V +DLS V+F+ATAN
Sbjct: 448 KSNPVYILDEIDKVNSDFRGDPSSALLEVLDPEQNETFQDNYLEVEYDLSNVLFIATANS 507
Query: 466 AQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQ 525
I P L DRME+IE+ GYT EEK+ IA +HLIP+ +HGL ++ + + +I+
Sbjct: 508 LDTIHPALRDRMEIIEVTGYTLEEKVEIAKKHLIPKQKKEHGLKAKDVTFSRKAIAKIIE 567
Query: 526 RYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVE 585
YTRE+GVR LER + + R A +A +E+ + +DV R+ GAE
Sbjct: 568 DYTRESGVRGLERTIGKVVRNIAKSIAMEEEFNSKIEIEDVIRIL----------GAEA- 616
Query: 586 MEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWT 645
EK + + D E A G+ GL WT
Sbjct: 617 -----------------------------FEKEI----YQDNETA------GLVTGLAWT 637
Query: 646 NFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQ 705
+ GGE+ F+E++ RGKG+L L+GQLGDV+KESA AL+++R+ A +L + +
Sbjct: 638 SVGGEILFIESSLSRGKGKLTLSGQLGDVMKESAMTALSYLRSHAEELGI----HHKVFD 693
Query: 706 GRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVK 765
D+HIH PAGAVPKDGPSAG+ ++T+L S+F++++V++ AMTGE+TLRG VLP+GG+K
Sbjct: 694 HYDLHIHVPAGAVPKDGPSAGIAMITSLASIFTQRKVKSRLAMTGEITLRGKVLPIGGLK 753
Query: 766 DKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+KILAA R GIK VIL +RN KD+ E+ + + L I ++++VLE A
Sbjct: 754 EKILAARRAGIKDVILCQRNKKDIDEIDSRYIKGLNIHFVDQVDEVLEIAL 804
>gi|294501426|ref|YP_003565126.1| ATP-dependent protease LonA [Bacillus megaterium QM B1551]
gi|294351363|gb|ADE71692.1| ATP-dependent protease LonA [Bacillus megaterium QM B1551]
Length = 766
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/763 (40%), Positives = 457/763 (59%), Gaps = 81/763 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSL-EMTKIEMEQ-------VEQDPDF 115
P+G T V++EGL R +V E Y+ + E ++++E ++ +
Sbjct: 74 PNG--TMRVLVEGLNRVTVTEFEDSEEYFVVHVEKQNEEHQVDVEDKALMRTLLDYFEQY 131
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I LS++ + +S +E+ GR LADI + I + + +L+
Sbjct: 132 IKLSKKVSVETLSTVSDIEEP----GR------------LADIVASHLPIKIQLKQEILE 175
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+K RL+ + + +++ +KI Q+V+ + ++QKE+ LR+QM+AI++ELGD +
Sbjct: 176 ITDVKERLNTIISHIQDEQEVLQLEKKIGQRVKKSMERTQKEYYLREQMKAIQKELGDKE 235
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
++ L K++++GM ++ + KEL R +K+ + R Y+E + LPW
Sbjct: 236 GKTGEVATLREKIEASGMTDHVKQVAFKELDRYEKIPATSAESSVIRNYIEWLIALPWTN 295
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+E+ L++ A++ L+ +HYGL +VK+R++EYLAV++L +GP+LC GPPGVGKTS
Sbjct: 296 ETEDT-LNIHNAEQVLNDEHYGLEKVKERVLEYLAVQQLTKSLKGPILCLAGPPGVGKTS 354
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
LA SIA++L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV LLDE
Sbjct: 355 LARSIATSLDRHFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGTINPVFLLDE 414
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK +D RGDP+SALLEVLDPEQN F+DHY+ +DLSKV+FVATAN IP PL D
Sbjct: 415 IDKMSNDFRGDPSSALLEVLDPEQNHNFSDHYIEETYDLSKVMFVATANNLATIPGPLRD 474
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+I++ GYT EKL IA RHL+ R L+ HGL LQI + + +I+ YTREAGVRN
Sbjct: 475 RMEIIQIAGYTELEKLEIAKRHLLLRQLENHGLQKGNLQIRDDALTAIIRLYTREAGVRN 534
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER +A++ R AA V E+++ + ++K
Sbjct: 535 LEREIASICRKAARIVVSGEKKRVVVTAK------------------------------- 563
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
LE+ LG PRF + AE G++ GL +T GG+ +E
Sbjct: 564 ------------------TLEEFLGKPRFRYGQ-AETEDQVGVATGLAYTTVGGDTLAIE 604
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ GKG L LTG+LGDV+KESAQ A ++VR+ L + + DIHIH P
Sbjct: 605 VSLSPGKGRLVLTGKLGDVMKESAQAAFSYVRSNTEKLGI----DEKFYEKHDIHIHVPE 660
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GAVPKDGPSAG+T+ TALVS + K VR + MTGE+TLRG VLP+GG+K+K L+AHR G
Sbjct: 661 GAVPKDGPSAGITIATALVSALTGKPVRREVGMTGEITLRGRVLPIGGLKEKSLSAHRAG 720
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
+ ++++P N +D+ ++P +V L+I+L ++ VLE A G
Sbjct: 721 LTKILIPHDNERDIEDIPDSVQEELDIVLVSHVDQVLEHALVG 763
>gi|206969948|ref|ZP_03230902.1| ATP-dependent protease La 1 [Bacillus cereus AH1134]
gi|229180746|ref|ZP_04308084.1| ATP-dependent protease La 1 [Bacillus cereus 172560W]
gi|206735636|gb|EDZ52804.1| ATP-dependent protease La 1 [Bacillus cereus AH1134]
gi|228602724|gb|EEK60207.1| ATP-dependent protease La 1 [Bacillus cereus 172560W]
Length = 776
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/755 (41%), Positives = 452/755 (59%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + A R
Sbjct: 84 PNG--TLRVLVEGLHRAEVIEFIEEENVVQVSIKTV------TEEVEDDLEEKAFMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 QTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E+I +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDI-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L++DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNNDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR++ G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIVQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A + E+++
Sbjct: 553 CRKVAKIIVTAERKR--------------------------------------------- 567
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+VV E + +LG F + AE+ G++ GL +T GG+ +E + GKG
Sbjct: 568 ----IVVTEKKIVDLLGKHIFRYGQ-AEKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|228929517|ref|ZP_04092536.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|301055977|ref|YP_003794188.1| endopeptidase La [Bacillus cereus biovar anthracis str. CI]
gi|228830096|gb|EEM75714.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|300378146|gb|ADK07050.1| endopeptidase La [Bacillus cereus biovar anthracis str. CI]
Length = 773
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 454/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 81 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTV------TEEVEADLEEKALMRTLL 132
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ + +K RL
Sbjct: 133 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIISVKERL 190
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 191 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 250
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW A+E++ +D
Sbjct: 251 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYMDWLLALPWTDATEDM-ID 309
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 310 LAHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 369
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 370 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKSVNPVFLLDEIDKMSNDF 429
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 430 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 489
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 490 GYTELEKVHIAREHLLPKQLQEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 549
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + + K+
Sbjct: 550 CRKAAKIIVTAERKRIVVTEKN-------------------------------------- 571
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
VVD +LG F +A E+ G++ GL +T GG+ +E + GKG
Sbjct: 572 -----VVD------LLGKHIFRYGQA-EKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 619
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 620 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 675
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 676 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 735
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 736 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 770
>gi|308174518|ref|YP_003921223.1| class III heat-shock ATP-dependent LonA protease [Bacillus
amyloliquefaciens DSM 7]
gi|384160349|ref|YP_005542422.1| class III heat-shock ATP-dependent LonA protease [Bacillus
amyloliquefaciens TA208]
gi|384165286|ref|YP_005546665.1| class III heat-shock ATP-dependent LonA protease [Bacillus
amyloliquefaciens LL3]
gi|384169427|ref|YP_005550805.1| ATP-dependent protease La 1 [Bacillus amyloliquefaciens XH7]
gi|307607382|emb|CBI43753.1| class III heat-shock ATP-dependent LonA protease [Bacillus
amyloliquefaciens DSM 7]
gi|328554437|gb|AEB24929.1| class III heat-shock ATP-dependent LonA protease [Bacillus
amyloliquefaciens TA208]
gi|328912841|gb|AEB64437.1| class III heat-shock ATP-dependent LonA protease [Bacillus
amyloliquefaciens LL3]
gi|341828706|gb|AEK89957.1| ATP-dependent protease La 1 [Bacillus amyloliquefaciens XH7]
Length = 774
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 292/667 (43%), Positives = 419/667 (62%), Gaps = 59/667 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
++ADI + + +++ +L++ D+K RL+K + + + + +KI Q+V+ + +
Sbjct: 162 RMADIVASHLPLKLKDKQDILETADIKERLNKVIRSIHNEKEVLEIEKKIGQRVKRSMER 221
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+ LR+QM+AI++ELGD + ++ +L K++ AGMP + + KEL R +K+
Sbjct: 222 TQKEYYLREQMKAIQKELGDKEGKTGEVQSLTEKIEEAGMPERVKETALKELSRYEKVPS 281
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
+ R Y++ + LPW +E+ LD+K A E LD +H+GL +VK+RI+EYLAV++
Sbjct: 282 SSAESSVIRNYIDWLIALPWSDETED-KLDIKKAGEILDKEHHGLEKVKERILEYLAVKQ 340
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LC GPPGVGKTSLA SI++++GR+F+RISLGGV+DE++IRGHRRTY+G+M
Sbjct: 341 LTKTLKGPILCLAGPPGVGKTSLAKSISTSMGRRFVRISLGGVRDESEIRGHRRTYVGAM 400
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I G+K+ G NPV LLDEIDK SD RGDP+SA+LEVLDPEQN TF+DHY+ FD
Sbjct: 401 PGRIIQGMKKAGKQNPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSTFSDHYIEETFD 460
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+F+ATAN IP PL DRME+I L GYT EKL I HL+P+ + +HGL L
Sbjct: 461 LSKVLFIATANNLASIPGPLRDRMEIISLSGYTENEKLEIVKDHLLPKQIKEHGLTKSNL 520
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
QI + + +I+ YTREAGVR LER +AA+ R AA + +E++
Sbjct: 521 QIRDQAITDIIRYYTREAGVRTLERQVAAICRKAAKAIVSEERK---------------- 564
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAE 631
RIT V E L LG R+ E +
Sbjct: 565 -----------------------------RIT----VTEKNLADYLGKRIFRYGQAETED 591
Query: 632 RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
++ G+ GL +T GG+ +E + GKG+L LTG+LGDV++ESAQ A ++VR++A
Sbjct: 592 QI---GVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKAE 648
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
L + + DIHIH P GAVPKDGPSAG+T+ TALVS + + V+ + MTGE
Sbjct: 649 QLGI----DPTFHENHDIHIHVPEGAVPKDGPSAGITMATALVSALTDRPVKREVGMTGE 704
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+K+K L AHR G+ +I P+ N KD+ ++P +V L+ I ++DV
Sbjct: 705 ITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLKFIFVSHLDDV 764
Query: 812 LEQAFEG 818
LE A G
Sbjct: 765 LEHALVG 771
>gi|254500479|ref|ZP_05112630.1| ATP-dependent protease La [Labrenzia alexandrii DFL-11]
gi|222436550|gb|EEE43229.1| ATP-dependent protease La [Labrenzia alexandrii DFL-11]
Length = 820
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 320/786 (40%), Positives = 458/786 (58%), Gaps = 74/786 (9%)
Query: 32 GASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTY 91
A D N ++ +N G A L L ++ P V V++EG R + + S R Y
Sbjct: 75 AADDDPNPDQI---YNVGTLATVLQL---LKLPDNTVK--VLVEGGARAQIGDYSDRTDY 126
Query: 92 YTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVP 151
+ A + L E+D + I + ++ E + ++ +K + +
Sbjct: 127 FEATATVLP---------EKDGENIEVEALARSVVAEFENYVKLNKKVSPEVLGAVNQID 177
Query: 152 IH-KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQ 210
+ KLAD + I E+ +L V + RL + +++ + ++V ++I +V+ Q
Sbjct: 178 DYSKLADTIASHLAIKIPEKQEILGVVSIAERLERVLGMMESEISVLQVEKRIRSRVKRQ 237
Query: 211 LSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKK 270
+ K+Q+E+ L +QM+AI++ELGD++D +D++ LE K++ + + E+++LK+
Sbjct: 238 MEKTQREYYLNEQMKAIQKELGDSEDGKDEVAELEEKIKKTKLTKEARERAAAEIKKLKQ 297
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
M P T R YL+ + +PW K S+ + DL A++ LD+DHYGL +VK+RI+EYLA
Sbjct: 298 MSPMSAEATVVRNYLDWLIGIPWSKKSK-VKHDLSFAEKVLDTDHYGLEKVKERIVEYLA 356
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
V+ RGP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRGHRRTYI
Sbjct: 357 VQSRANKLRGPILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRGHRRTYI 416
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
GSMPG++I +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN +F DHYL V
Sbjct: 417 GSMPGKVIQSMKKAKKSNPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNSSFMDHYLEV 476
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
+DLS V+FV TAN IP PL+DRME+I + GYT EEK+ I RHLI + HGL
Sbjct: 477 EYDLSDVMFVTTANTLN-IPGPLMDRMEIIRIAGYTEEEKVEICRRHLILKAEKDHGLKD 535
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
I + ++ V++RYTREAGVRNLER +A LAR A + ++E
Sbjct: 536 GEFSIEDDALQFVVRRYTREAGVRNLEREMATLARKAVKDILMSDKES------------ 583
Query: 571 SPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAA 630
+ V E ++E+ LG PR+ E A
Sbjct: 584 -------------------------------------ITVTEEIVEEYLGVPRYRYGE-A 605
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARA 690
E G+ GL WT GGE+ +E M GKG++ +TG L DV+KES A ++VR+R+
Sbjct: 606 ELEDQVGVVTGLAWTEVGGELLTIEGLMMPGKGKMTVTGNLKDVMKESISAAASYVRSRS 665
Query: 691 TDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTG 750
D + L + +DIH+H P GA PKDGPSAG+ + TA++S + VR D AMTG
Sbjct: 666 IDFGIEPP----LFEKKDIHVHVPEGATPKDGPSAGIAMATAVISTMTGIPVRRDVAMTG 721
Query: 751 EMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMED 810
E+TLRG VLP+GG+K+K+LAA R GIK V++PE N KDL ++P +V SLEII M++
Sbjct: 722 EITLRGRVLPIGGLKEKLLAALRGGIKLVMIPEDNAKDLADIPDSVKNSLEIIPVSGMDE 781
Query: 811 VLEQAF 816
VL+ A
Sbjct: 782 VLKHAL 787
>gi|107101235|ref|ZP_01365153.1| hypothetical protein PaerPA_01002268 [Pseudomonas aeruginosa PACS2]
Length = 778
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 308/664 (46%), Positives = 421/664 (63%), Gaps = 56/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+L D A + E++ +L+ DL R+ L+D + ++V ++I +V+ Q+ +
Sbjct: 140 RLVDTMAAHMALKIEQKQDILEITDLSSRVEHVLALLDAEIDLLQVEKRIRGRVKKQMER 199
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELGD D+ +++ L++++ +AG+ EL +LK+M P
Sbjct: 200 SQREYYLNEQMKAIQKELGDIDEGHNEVEELKKRIDAAGLTKEAHTKATAELNKLKQMSP 259
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + ++PW KA ++ DL A++ LD+DHYGL VK+RI+EYLAV+K
Sbjct: 260 MSAEATVVRSYIDWLLNVPW-KAESKVRHDLAKAEDILDADHYGLEEVKERILEYLAVQK 318
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GPVLC VGPPGVGKTSLA SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 319 RVKKLKGPVLCLVGPPGVGKTSLAESIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSM 378
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGRLI + +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +D
Sbjct: 379 PGRLIQKMTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYD 438
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+F+ TAN + IP PLLDRMEVI LPGYT +EK+ IA ++LIP+ + +GL L
Sbjct: 439 LSDVMFLCTAN-SMNIPAPLLDRMEVIRLPGYTEDEKVNIAAKYLIPKQVQANGLKKGEL 497
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
E ++ +I+ YTREAGVR+LER +A + R A + A+ ++ QA+ SS+
Sbjct: 498 TFEEGALRDIIRYYTREAGVRSLERQIAKVCRKAVKEHAKLKRIQAVVSSE--------- 548
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LE LG +F AE+
Sbjct: 549 ----------------------------------------TLENYLGVRKF-RYGLAEQQ 567
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GGE+ +EA + GKG+L TG LGDV+ ES ALT VR+RA L
Sbjct: 568 DQIGQVTGLAWTQVGGELLTIEAAVVPGKGQLTKTGSLGDVMAESITAALTVVRSRAQSL 627
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ A + + RDIHIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+T
Sbjct: 628 GIAA----DFHEKRDIHIHVPEGATPKDGPSAGIGMCTALVSAITQIPVRADVAMTGEIT 683
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VL +GG+K+K+LAAHR GIK VI+PE N++DL E+P + + L I K +++VL+
Sbjct: 684 LRGQVLAIGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKSDLVIKPVKWIDEVLQ 743
Query: 814 QAFE 817
A +
Sbjct: 744 IALQ 747
>gi|407451613|ref|YP_006723337.1| ATP-dependent Lon protease [Riemerella anatipestifer RA-CH-1]
gi|403312597|gb|AFR35438.1| ATP-dependent Lon protease, bacterial type [Riemerella
anatipestifer RA-CH-1]
Length = 796
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 308/769 (40%), Positives = 457/769 (59%), Gaps = 70/769 (9%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
G A+ L + ++ P G +T ++ G+ RF + +L + + A I L T + ++
Sbjct: 97 GTTAKILKI---IKLPDGNIT--AIMRGVGRFKLNKLVEKEPFLKAEIEKLNETSTKSKE 151
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFE 168
++ AL K A+++I + Q + +E+ +L + A+ + + E
Sbjct: 152 -----EYEALIENIKELALKIIELDPQIPNSARFAITNIESQ--EELLNYICANAKFTAE 204
Query: 169 EQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIK 228
E+ +L++ VR K EL+ + + I QK ++ ++Q+E+ L QQ++AI+
Sbjct: 205 EKQKLLETKSFLVRAKKCYELMHDEFNKLELRSIIHQKTTREMDRNQREYFLNQQIKAIQ 264
Query: 229 EELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELI 288
EELG E+D L+ K + I +H QKE+ RL + P P Y R YL+
Sbjct: 265 EELGGGP--ENDAAELQEKAKKIKWSEEIEQHFQKEIHRLNRQNPHSPDYNVQRNYLDFF 322
Query: 289 ADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGP 348
DLPWE S++I DL A+ L+S+H+G+ VK+RI+EY+AV KLK + + P+LC VGP
Sbjct: 323 TDLPWEHYSKDI-FDLNRAENVLNSEHFGMEDVKKRILEYIAVLKLKNNMKSPILCLVGP 381
Query: 349 PGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCN 408
PGVGKTSL S+A ALGRK+IRISLGG+ DE++IRGHR+TYIG+M GR++ +K+ G N
Sbjct: 382 PGVGKTSLGKSVAEALGRKYIRISLGGLHDESEIRGHRKTYIGAMAGRVLQSIKKAGTSN 441
Query: 409 PVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQP 468
PV++LDEIDK G + GDP+SALLEVLDPEQNKTF D++L + +DLSKV+F+ATAN
Sbjct: 442 PVIVLDEIDKIGQGIHGDPSSALLEVLDPEQNKTFYDNFLEIGYDLSKVMFIATANSLST 501
Query: 469 IPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYT 528
I PLLDRMEVI+L GYT EK++IA +HLI + + ++GL + L++ + +I+ +T
Sbjct: 502 IQRPLLDRMEVIQLSGYTVGEKVQIAKKHLIKKQIAENGLKNTQLKLGVKEITHIIESHT 561
Query: 529 REAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEV 588
RE+GVRNLE+ +A +AR A+++ +E E
Sbjct: 562 RESGVRNLEKKIAKIARWVALQIT-------------------------------MEKEY 590
Query: 589 IPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFG 648
P ++ A ++++LG P + +E + PG+ GL WT+ G
Sbjct: 591 NPK------------------INIATIDEILGVPI--KKNLSEMLDVPGVVTGLAWTSVG 630
Query: 649 GEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
G++ F+E+ GKG L +TG LG+V+KESA IAL +++A+ L + E L +
Sbjct: 631 GDILFIESILSEGKGNLTMTGNLGNVMKESATIALEYIKAKHQSLGIEQET----LSKNN 686
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
IH+H P GA PKDGPSAG+ ++T++VS F K+VR AMTGE+TLRG VLPVGG+K+K+
Sbjct: 687 IHLHIPEGATPKDGPSAGIAMLTSMVSSFRNKKVRPHIAMTGEITLRGKVLPVGGIKEKL 746
Query: 769 LAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
LAA R GIK VIL E N KD ++ L SL+I ME+V+ A E
Sbjct: 747 LAASRSGIKEVILCEDNRKDYEDIKDKSLNSLKIHYVNTMEEVINLALE 795
>gi|409394839|ref|ZP_11245986.1| ATP-dependent protease La [Pseudomonas sp. Chol1]
gi|409120488|gb|EKM96832.1| ATP-dependent protease La [Pseudomonas sp. Chol1]
Length = 798
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 316/706 (44%), Positives = 436/706 (61%), Gaps = 61/706 (8%)
Query: 117 ALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQL 171
A +R+ + L+S EQ + G + +VL I +L D A + E++
Sbjct: 118 ADAREAEVFIRSLLSQFEQYVQMGKKVPAEVLTSLTGIDDPARLVDTMAAHMALKIEQKQ 177
Query: 172 VMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEEL 231
+L+ DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++EL
Sbjct: 178 AILEITDLAARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKEL 237
Query: 232 GDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADL 291
GD D+ +++ L++++++AG+ + + Q EL +LK+M P T R Y++ + ++
Sbjct: 238 GDIDEGHNEIDDLKKRIENAGLSKDAYAKAQAELNKLKQMSPMSAEATVVRTYIDWLVNV 297
Query: 292 PWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGV 351
PW KA+ ++ LDL A+E LD+DHYGL VK RI+EYLAV+K +GPVLC VGPPGV
Sbjct: 298 PW-KAASKVRLDLAKAEEVLDADHYGLDEVKDRILEYLAVQKRVKKLKGPVLCLVGPPGV 356
Query: 352 GKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVM 411
GKTSLA SIA + RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+
Sbjct: 357 GKTSLAESIARSTNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLF 416
Query: 412 LLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPP 471
LLDEIDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ TAN + IP
Sbjct: 417 LLDEIDKMASDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFICTAN-SMNIPA 475
Query: 472 PLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREA 531
PLLDRMEVI LPGYT +EK+ IA R+L P+ + +GL L I E+ ++ +I+ YTREA
Sbjct: 476 PLLDRMEVIRLPGYTEDEKINIATRYLAPKQIQANGLKKGELSIDESAIRDIIRYYTREA 535
Query: 532 GVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPM 591
GVR+LER LA + R KV ++
Sbjct: 536 GVRSLERQLAKVCR----KVVKE------------------------------------- 554
Query: 592 GESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEV 651
H +F + V LE LG +F AE G GL WT GGE+
Sbjct: 555 ----HATQKSFHVD----VTADSLEHFLGVRKF-RYGLAELQDQVGQVTGLAWTQVGGEL 605
Query: 652 QFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHI 711
+EA + GKG L TG LG+V+ ES ALT VR+RA + + + + +DIHI
Sbjct: 606 LTIEAAVVPGKGRLTKTGSLGEVMGESITAALTVVRSRARAMGIAP----DFHEKQDIHI 661
Query: 712 HFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAA 771
H P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+TLRG VL +GG+K+K+LAA
Sbjct: 662 HVPEGATPKDGPSAGIGMCTALVSALTQIPVRADVAMTGEITLRGQVLAIGGLKEKLLAA 721
Query: 772 HRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
HR GIK VI+PE N +DL E+P + L+I K +++VL+ A +
Sbjct: 722 HRGGIKTVIIPEENQRDLKEIPENIKQDLQIKPVKWIDEVLQIALQ 767
>gi|398867305|ref|ZP_10622769.1| ATP-dependent protease La [Pseudomonas sp. GM78]
gi|398237283|gb|EJN23037.1| ATP-dependent protease La [Pseudomonas sp. GM78]
Length = 798
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 329/759 (43%), Positives = 459/759 (60%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S ++ E++ E++ + S
Sbjct: 80 PDGTVK--VLVEGEQRGAVERFSEVDGHCRAEVSLID----EVDAPERESEVFVRS---- 129
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 130 -----LLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEVEELKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQITANGLKKGELEFDAEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A +E AL
Sbjct: 543 QIAKVCRKAV-------KEHALEK------------------------------------ 559
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
R + + D+ LE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 560 ----RFSVKVTADD--LEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PLDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTSIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKT 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|315499783|ref|YP_004088586.1| ATP-dependent protease la [Asticcacaulis excentricus CB 48]
gi|315417795|gb|ADU14435.1| ATP-dependent protease La [Asticcacaulis excentricus CB 48]
Length = 797
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/783 (41%), Positives = 452/783 (57%), Gaps = 69/783 (8%)
Query: 34 SDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYT 93
+ G + E ++ GV A L L ++ P G V V++EG R ++ + R +Y
Sbjct: 53 NSGDDDPEADAIYDIGVLANVLQL---LKLPDGTVK--VLVEGKSRAKIKRFTGRSEFYE 107
Query: 94 ARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIH 153
A +LE V Q PD AL R I + K+ + L E
Sbjct: 108 AEAYALE------PAVTQGPDLEALVRAVTDQFENYIKL--NKKIPPEALQALAEVSEAD 159
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
LAD A I E+ +L+ + + RL + L++ + ++V +KI +V+ Q+ K
Sbjct: 160 VLADSIAAHLVIKIGEKQQLLEQLAVAKRLEQIYALMEGEISVLQVEKKIRSRVKRQMEK 219
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+Q+E+ L +QM+AI+ ELG+ DD +D+++ LE+K+++ + EL +L+ M P
Sbjct: 220 TQREYYLNEQMKAIQRELGEQDDAKDEILELEKKIKATKLSKEARAKAMSELNKLRHMSP 279
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R YL+ + +PW AS+ +DL A++ LD+DHYGL +VK+RI+E+LAV+
Sbjct: 280 MSAESTVVRNYLDWLLAIPW-GASKPKPIDLSKAEDTLDADHYGLEKVKERILEHLAVQA 338
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GR+F+RISLGGV+DE++IRGHRRTYIGSM
Sbjct: 339 RMGTLKGPILCLVGPPGVGKTSLGKSIAKATGREFVRISLGGVRDESEIRGHRRTYIGSM 398
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG++I +K+ N LLDEIDK G+D RGDPASALLEVLDP QN TFNDHYL V +D
Sbjct: 399 PGKIIQSMKKAKTTNAFFLLDEIDKMGADWRGDPASALLEVLDPAQNSTFNDHYLEVDYD 458
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSK++FV TAN +P PLLDRME+I +PGYT +EK+ IA RH++P + HGL +
Sbjct: 459 LSKIMFVTTANSLN-MPQPLLDRMEIIRIPGYTEDEKVEIAKRHILPSLAKDHGLQGDEW 517
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+PE ++ +I+ YTREAGVR+LER L LAR +A ++
Sbjct: 518 IVPEQAIRDLIRYYTREAGVRSLERELGNLARKTIRDLAREK------------------ 559
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
S + VDEA L K G +F E E
Sbjct: 560 -------------------------------VSSITVDEARLAKYAGVRKFHYGETDE-T 587
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
GI GL WT FGG++ +EA M GKG + +TG L DV+KES A ++V+A A
Sbjct: 588 DQVGIVTGLAWTEFGGDILTIEAIKMPGKGNMKVTGNLKDVMKESVSAANSYVKALAPKF 647
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
++ + + D+H+H P GA PKDGPSAGV +VTA+VS+ + VR D AMTGE+T
Sbjct: 648 GILPP----VFERTDVHVHVPEGATPKDGPSAGVAMVTAMVSVLTGIPVRKDIAMTGEIT 703
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VL +GG+K+K+LAA R G+K V++P+ N KDL E+P V A LEII +E VL
Sbjct: 704 LRGRVLAIGGLKEKLLAALRSGVKTVLIPKENEKDLTELPENVKAGLEIIPVSHVEQVLT 763
Query: 814 QAF 816
A
Sbjct: 764 HAL 766
>gi|269102131|ref|ZP_06154828.1| ATP-dependent protease La Type I [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162029|gb|EEZ40525.1| ATP-dependent protease La Type I [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 787
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 305/667 (45%), Positives = 427/667 (64%), Gaps = 59/667 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + ++ +L+ VD+ RL +++ + ++V ++I +V+ Q+ K
Sbjct: 163 RLADTIAAHMPLKLADKQKVLEIVDITERLEFLMAMMESEIDLLQVEKRIRGRVKKQMEK 222
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELGD DD D+ AL+ K+ + MP+ + ++EL++LK M P
Sbjct: 223 SQREYYLNEQMKAIQKELGDLDDAPDEFEALKAKIDESKMPAEAKEKTEQELQKLKMMSP 282
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + ++PW K S+ + DL A+E L+SDHYGL RVK+RI+EYLAV+
Sbjct: 283 MSAEATVVRGYIDWMLNVPWHKRSK-VKKDLAKAEEILNSDHYGLERVKERILEYLAVQS 341
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA+A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 342 RVNKLKGPILCLVGPPGVGKTSLGQSIAAATGRKYVRMALGGVRDEAEIRGHRRTYIGSM 401
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG+LI + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN FNDHYL V +D
Sbjct: 402 PGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNNAFNDHYLEVDYD 461
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA RHL+ + + ++GL +
Sbjct: 462 LSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKRHLLDKQIKRNGLKPGEV 520
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ ++ + +I+ YTREAGVR LER ++ L R A ++ + + + S+D
Sbjct: 521 DVDDSALIGIIRYYTREAGVRGLEREISKLCRKAVKEILLNKDVKTVSISQD-------- 572
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AE 631
L+ LG RFD +A +
Sbjct: 573 ----------------------------------------NLKDYLGVQRFDYGKADDSN 592
Query: 632 RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
RV G VGL WT GG++ +E +M GKG+L TG LGDV++ES Q A+T VR RA
Sbjct: 593 RV---GQVVGLAWTEVGGDLLTIETESMPGKGKLTYTGSLGDVMQESIQAAMTVVRTRAE 649
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
L + + + + RDIH+H P GA PKDGPSAG+ + TALVS + VRAD AMTGE
Sbjct: 650 RLGIAS----DFYEKRDIHVHVPEGATPKDGPSAGIAMCTALVSSLTGNPVRADVAMTGE 705
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+K+K+LAAHR GIK V++P+ N +DL E+PA V+A L++ + +++V
Sbjct: 706 ITLRGEVLPIGGLKEKLLAAHRGGIKTVLIPKENERDLEEIPANVIADLDVRPVRWIDEV 765
Query: 812 LEQAFEG 818
L A +
Sbjct: 766 LTIALQN 772
>gi|47566660|ref|ZP_00237482.1| ATP-dependent protease La [Bacillus cereus G9241]
gi|47556690|gb|EAL15022.1| ATP-dependent protease La [Bacillus cereus G9241]
Length = 773
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 314/755 (41%), Positives = 455/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 81 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTI------TEEVEADLEEKALMRTLL 132
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ + +K RL
Sbjct: 133 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIISVKERL 190
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 191 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 250
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L KM+ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 251 LREKMEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYMDWLLALPWTEATEDM-ID 309
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 310 LAHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 369
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 370 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKSVNPVFLLDEIDKMSNDF 429
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 430 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 489
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 490 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEMIRYYTREAGVRTLERQIAKV 549
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + + K+
Sbjct: 550 CRKAAKIIVTAERKRIVVTEKN-------------------------------------- 571
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
VVD +LG F +A E+ G++ GL +T GG+ +E + GKG
Sbjct: 572 -----VVD------LLGKHIFRYGQA-EKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 619
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ + + DIHIH P GAVPKDGP
Sbjct: 620 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPDFHEKNDIHIHVPEGAVPKDGP 675
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 676 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 735
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 736 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 770
>gi|422617410|ref|ZP_16686113.1| ATP-dependent protease La [Pseudomonas syringae pv. japonica str.
M301072]
gi|330897793|gb|EGH29212.1| ATP-dependent protease La [Pseudomonas syringae pv. japonica str.
M301072]
Length = 798
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 330/777 (42%), Positives = 459/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A ++ +E
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALIE----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALTKANAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL + E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEISFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKAV-------------------------------- 552
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
H + F + V MLE LG +F AE+ G
Sbjct: 553 -------------KEHAMEKRFAVQ----VTADMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTRVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|227824395|ref|ZP_03989227.1| ATP-dependent protease La [Acidaminococcus sp. D21]
gi|352683494|ref|YP_004895477.1| ATP-dependent protease La [Acidaminococcus intestini RyC-MR95]
gi|226904894|gb|EEH90812.1| ATP-dependent protease La [Acidaminococcus sp. D21]
gi|350278147|gb|AEQ21337.1| ATP-dependent protease La [Acidaminococcus intestini RyC-MR95]
Length = 776
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 295/665 (44%), Positives = 420/665 (63%), Gaps = 55/665 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
++AD+ I E+ +L+++ +K RL + + L+ + + + I+Q+V Q+ +
Sbjct: 167 RVADMIGGYLTIDVPEKEKLLEAISVKERLHLLYTYLCKELEIVTLEKNISQQVRKQIEQ 226
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+Q+E+ LR+QM+AI +EL + D+ + ++ + KM +P + K + KEL RL KM P
Sbjct: 227 NQREYYLREQMKAISKELNEGDEKQSEVDEYKAKMAKLNLPEEVKKALDKELDRLLKMPP 286
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
R YL+ LPW K +++ + D+K A + LD DHYGL +VK+RI++YLAVR
Sbjct: 287 MMAESAVIRSYLDTCLSLPWGKMTQD-NYDIKKAAQILDKDHYGLKKVKERILDYLAVRA 345
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L RGP++C VGPPGVGKTSLA SIA A+ RKF RISLGGV+DEA+IRGHRRTY+G++
Sbjct: 346 LTKSNRGPIICLVGPPGVGKTSLAQSIARAVNRKFTRISLGGVRDEAEIRGHRRTYVGAL 405
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGRLI G+ G NPV LLDE+DK G+D RGDPASALLEVLDPEQN F+DHY+ +D
Sbjct: 406 PGRLIHGMIECGTDNPVFLLDEVDKMGADFRGDPASALLEVLDPEQNSHFSDHYIEFAYD 465
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
+S V ++ TAN + IPP LLDR+EVI+L YT EEK++IA +HL+P+ GL ++ L
Sbjct: 466 MSNVFWIVTANTVETIPPALLDRLEVIQLDSYTDEEKIKIAQQHLLPKERKLSGLLAKNL 525
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ ++ +I+ YTREAGVRNLER +A + R AA ++ E++ E+
Sbjct: 526 TLSPKTLEHIIRDYTREAGVRNLERKIATICRKAARRIVEKKIEK--------------- 570
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
+ V A L++ LGP + + + +
Sbjct: 571 ----------------------------------VSVGVANLKEFLGPAVYLESDMKAK- 595
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
AA G+ GL WT+ GGE+ +E GKG+L LTGQLGDV+KESAQ A T++R+RA +L
Sbjct: 596 AAIGVCTGLAWTSVGGELLKIEVVVCEGKGKLVLTGQLGDVMKESAQTAFTYIRSRAKEL 655
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
L E N + DIHIH P GA+PKDGPSAG+T+ TA+ S ++++V+AD AMTGE+T
Sbjct: 656 GL--EPDFN--EKIDIHIHVPEGAIPKDGPSAGITMATAMESALTKRKVKADLAMTGEIT 711
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
L G VLP+GG+K+K+LAA RY IK ++LP +N +DL E+P V S++ I M+ V +
Sbjct: 712 LTGQVLPIGGLKEKVLAAARYQIKTILLPRQNEQDLEELPDHVKKSMKFIPVDHMDQVTK 771
Query: 814 QAFEG 818
A E
Sbjct: 772 LALEA 776
>gi|374855239|dbj|BAL58101.1| ATP-dependent protease La [uncultured prokaryote]
Length = 798
Score = 560 bits (1443), Expect = e-156, Method: Compositional matrix adjust.
Identities = 330/769 (42%), Positives = 463/769 (60%), Gaps = 86/769 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G + +V +GL R + E R Y TAR+ ++V D AL R
Sbjct: 90 PDGTIRTLV--QGLERVRILEYVQREPYLTARVELFP------DEVASTVDVEALRRALI 141
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS---FEISFEEQLVMLDSVDLK 180
L+S++++ V +E + + F+A+ E ++ + L
Sbjct: 142 EVFKTLVSLVDEIPDEAA---VAIEALAEPRQVASFIATTVPMETRVRQEAL---EAPLD 195
Query: 181 VRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDD 240
VR+ + E + + + KI + + +L+++Q+E +LR+Q+R+I++ELG+ D +
Sbjct: 196 VRMRRLLEALQHEVAVRELGRKIAAETQARLTRAQQEAILREQLRSIQKELGE-DGSAAE 254
Query: 241 LVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEI 300
+ L RK+ AG+P K ++EL RL + P P Y R YL+ + LPW + +
Sbjct: 255 VEELRRKLDEAGLPEEARKEAERELNRLTTIPPGSPEYGMVRTYLDWMLSLPWNRLTGGA 314
Query: 301 DLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLK----------PD-ARGPVLCFVGPP 349
+D+ A+E LD+DHY L +VK+R++EYLAVRKL+ PD A P+LCFVGPP
Sbjct: 315 -IDVSKAREILDADHYDLEKVKERLLEYLAVRKLRQERLGAQEGAPDSAHEPILCFVGPP 373
Query: 350 GVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNP 409
GVGKTSL SIA ALGR+F+R+SLGGV DEA+IRGHRRTYIG++PGR+I G++R +P
Sbjct: 374 GVGKTSLGQSIARALGRRFVRVSLGGVHDEAEIRGHRRTYIGALPGRIIQGIRRAETRDP 433
Query: 410 VMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPI 469
V +LDEIDK G+D RGDP+SALLEVLDP QN F D+YL VPFDLS+V+F+ATAN I
Sbjct: 434 VFMLDEIDKVGADWRGDPSSALLEVLDPAQNHAFVDNYLGVPFDLSQVLFIATANTTDTI 493
Query: 470 PPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTR 529
PPPLLDRMEVI + GYT +EK+ IA RHL+ L+ HGL + L I E ++ +I+ YTR
Sbjct: 494 PPPLLDRMEVIAIAGYTEDEKVEIARRHLLREQLEAHGLKPDELTISEDALRFIIRGYTR 553
Query: 530 EAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVI 589
EAGVR L R +A + R A ++AE+
Sbjct: 554 EAGVRGLSRQVATICRKVARELAEEG---------------------------------- 579
Query: 590 PMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGG 649
T+P V ++E+ LG PRF D E+AER PG++ GL WT GG
Sbjct: 580 ---------------TAPREVTPELIERYLGRPRFHD-ESAERTDRPGVATGLAWTPVGG 623
Query: 650 EVQFVEATAMRGKGE-LHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRD 708
+V +VEAT M K E L LTGQLGDV++ESAQ AL+++R+ L + ++ +G+
Sbjct: 624 DVLYVEATMMPSKQERLILTGQLGDVMRESAQAALSYLRSDGARLGI----DPSVFEGKT 679
Query: 709 IHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKI 768
+HIH PAGA+PKDGPSAGVT+VTAL SL +K VR AMTGE+TLRG VLPVGG+K+K+
Sbjct: 680 VHIHVPAGAIPKDGPSAGVTMVTALASLALQKPVRPGVAMTGEITLRGKVLPVGGIKEKV 739
Query: 769 LAAHRYGIKRVILPERNLKDLVE-VPAAVLASLEIILAKRMEDVLEQAF 816
LAAHR G++ VILP+RN +D++E VP + + + + +++VLE A
Sbjct: 740 LAAHRAGLRTVILPKRNERDVLEDVPEHLRQEMNFVYVETIDEVLEAAL 788
>gi|392534091|ref|ZP_10281228.1| DNA-binding ATP-dependent protease La [Pseudoalteromonas arctica A
37-1-2]
Length = 789
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 326/778 (41%), Positives = 461/778 (59%), Gaps = 88/778 (11%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKI-EME 107
G A L L ++ P G V V++EG R ++E ++ A +E + E E
Sbjct: 72 GTIATVLQL---LKLPDGTVK--VLVEGTQRAQIEEFVDNDDFFVANAQFIESDSVDEKE 126
Query: 108 Q-------VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFV 160
Q + Q ++ L+++ + +S +++ + LAD
Sbjct: 127 QDIFIRSAISQFEGYVKLNKKIPPEVLTSVSGIDEPAR----------------LADTMA 170
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E+ +L+ + RL L++ + ++V +KI +V+ Q+ KSQ+E+ L
Sbjct: 171 AHMPLKVPEKQKVLEISSVTERLEYLMALMEGEIDLLQVEKKIRTRVKKQMEKSQREYYL 230
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELG+ DD D+ AL+++++ +GMPS EL +LK M P T
Sbjct: 231 NEQMKAIQKELGELDDVPDEFEALKKRIEESGMPSEAQDKATTELNKLKMMSPMSAEATV 290
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + ++PW+K S+ + DL A++ LDSDH+GL +VK+RIIEYLAV++ +G
Sbjct: 291 VRSYIDTLINVPWKKRSK-VKKDLAGAQKILDSDHHGLDKVKERIIEYLAVQQRTNKLKG 349
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
P+LC VGPPGVGKTSL SIA + GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI
Sbjct: 350 PILCLVGPPGVGKTSLGQSIARSTGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQN 409
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN F DHYL V +DLS V+FV
Sbjct: 410 MTKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSHFADHYLEVDYDLSDVMFV 469
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
AT+N IP PLLDRMEVI L GYT +EKL IA HLI + + ++GL + I ++ +
Sbjct: 470 ATSNSFN-IPGPLLDRMEVIRLSGYTEDEKLNIAKEHLITKQVKRNGLKESEIVIEDSAI 528
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+I+ YTREAGVRNLER ++ L R A + LL+
Sbjct: 529 IGIIRYYTREAGVRNLEREISKLCRKAVKNI---------------------LLE----- 562
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFD--DREAAERVAAPGI 638
+ T + +++ LE LG RFD E +R+ G
Sbjct: 563 ----------------------KDTKTVTINQDNLEDFLGVQRFDYGKAEDGDRI---GQ 597
Query: 639 SVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAE 698
GL WT GG++ +E A+ GKG+L TG LGDV++ES Q A+T VR RA ++ +
Sbjct: 598 VTGLAWTEVGGDLLTIECAAVPGKGKLTYTGSLGDVMQESIQAAMTVVRNRADTFRINS- 656
Query: 699 DGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLV 758
+ + RDIH+H P GA PKDGPSAG +VT LVS + VRAD AMTGE+TLRG V
Sbjct: 657 ---DFYEKRDIHVHVPEGATPKDGPSAGAAMVTGLVSSLTGNPVRADVAMTGEITLRGEV 713
Query: 759 LPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
LP+GG+K+K+LAAHR GIK VI+P+ N +DL E+P VLA L+I +++VL+ A
Sbjct: 714 LPIGGLKEKLLAAHRGGIKTVIIPKINERDLKEIPENVLAGLDIHPVTWIDEVLKLAL 771
>gi|206976047|ref|ZP_03236957.1| ATP-dependent protease La 1 [Bacillus cereus H3081.97]
gi|423373571|ref|ZP_17350910.1| lon protease [Bacillus cereus AND1407]
gi|206745799|gb|EDZ57196.1| ATP-dependent protease La 1 [Bacillus cereus H3081.97]
gi|401096036|gb|EJQ04086.1| lon protease [Bacillus cereus AND1407]
Length = 776
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 313/755 (41%), Positives = 455/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTI------TEEVEADLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ + +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIISVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDM-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKSVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + + K+
Sbjct: 553 CRKAAKIIVTAERKRIVVTEKN-------------------------------------- 574
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
VVD +LG F +A E+ G++ GL +T GG+ +E + GKG
Sbjct: 575 -----VVD------LLGKHIFRYGQA-EKTDQVGMATGLAYTTAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ + + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPDFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|375256563|ref|YP_005015730.1| endopeptidase La [Tannerella forsythia ATCC 43037]
gi|363408455|gb|AEW22141.1| endopeptidase La [Tannerella forsythia ATCC 43037]
Length = 830
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 323/774 (41%), Positives = 464/774 (59%), Gaps = 78/774 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ 108
GV A L R +E P G T +L+G RF + EL+ Y T RIS LE T +
Sbjct: 118 GVVAEIL---RVLEMPDGSTT--AILQGRKRFQLHELTETEPYLTGRISLLEDTHPK--- 169
Query: 109 VEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEIS-- 166
+ D +F AL K +++++ +G + L+ ++ ++ A +++ SF
Sbjct: 170 -KSDREFEALISTIKDLTVKMLTA------SGEPPRDLIYSIRNNQNA-MYLISFACCNI 221
Query: 167 ---FEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
E+ +L DLK R + +++R Q I + I K ++K QKE+ L+QQ
Sbjct: 222 LSHSPEKQELLAINDLKDRAYRLLFILNREYQLIELKASIQMKTHEDINKQQKEYFLQQQ 281
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
++AI+EELG N +D ++ L K +S P + + +KE+ +L+++ PQ P Y+
Sbjct: 282 IKAIQEELGGNMND-IEIKELREKAKSKKWPKEVGEIFEKEVAKLERVHPQSPDYSIQSQ 340
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
Y++ I LPW + S++ + +L A+ LD DHYG+ +VK+RIIE+LAV KLK D R P+L
Sbjct: 341 YVQTIISLPWGEYSKD-NFNLSHAQRVLDRDHYGMEKVKERIIEHLAVLKLKKDLRSPIL 399
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C GPPGVGKTSL S+A ALGRK++RISLGG+ DEA+IRGHRRTYIG+M GR+I L++
Sbjct: 400 CLYGPPGVGKTSLGKSVAEALGRKYVRISLGGLHDEAEIRGHRRTYIGAMVGRIIQNLQK 459
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
G NPV +LDEIDK G+D +GDPASALLEVLDPEQN TF+D+YL++ +DLSKV+FVATA
Sbjct: 460 AGTSNPVFVLDEIDKVGNDFKGDPASALLEVLDPEQNTTFHDNYLDIDYDLSKVLFVATA 519
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N I PLLDRME+IE+ GY EEK+ IA+RHLIP+ ++ HG+ ++ V+ V
Sbjct: 520 NNLNTISQPLLDRMELIEVSGYILEEKIEIAVRHLIPKQMELHGIPKHTVKFHRHAVRAV 579
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
I+ YTRE+GVR LE+ +A + R A K+A E+ + + ++D
Sbjct: 580 IESYTRESGVRELEKKIAKIMRRIARKIASDEEVRPMIKAED------------------ 621
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
L++ LG + R+ + G+ GL
Sbjct: 622 -------------------------------LKEYLGAVEY-TRDKYQGNEYAGVVTGLA 649
Query: 644 WTNFGGEVQFVEATAMRGKG-ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMN 702
WT GGE+ FVE++ RGKG +L +TG LGDV+KESA +AL + + A + E
Sbjct: 650 WTAVGGEILFVESSLSRGKGSKLTITGNLGDVMKESAMLALEYAHSHAGQFGIDEE---- 705
Query: 703 LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVG 762
L + ++HIH P GA+PKDGPSAG+T+VT+LVS+F++++V+ + AMTGE+TLRG VLPVG
Sbjct: 706 LFENWNVHIHVPEGAIPKDGPSAGITMVTSLVSIFTQRKVKRNLAMTGEITLRGKVLPVG 765
Query: 763 GVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
G+K+KILAA R GIK +IL N KD+ E+ A L L + VL+ A
Sbjct: 766 GIKEKILAAKRAGIKEIILCAENRKDVEEINAMYLEGLTFHYVDDITQVLDLAL 819
>gi|222097916|ref|YP_002531973.1| endopeptidase la (ATP-dependent protease la 1) [Bacillus cereus Q1]
gi|221241974|gb|ACM14684.1| endopeptidase La (ATP-dependent protease La 1) [Bacillus cereus Q1]
Length = 773
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 313/755 (41%), Positives = 455/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 81 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTI------TEEVEADLEEKALMRTLL 132
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ + +K RL
Sbjct: 133 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIISVKERL 190
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 191 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 250
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 251 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDM-ID 309
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 310 LAHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 369
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 370 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKSVNPVFLLDEIDKMSNDF 429
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 430 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 489
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 490 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 549
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + + K+
Sbjct: 550 CRKAAKIIVTAERKRIVVTEKN-------------------------------------- 571
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
VVD +LG F +A E+ G++ GL +T GG+ +E + GKG
Sbjct: 572 -----VVD------LLGKHIFRYGQA-EKTDQVGMATGLAYTTAGGDTLAIEVSVAPGKG 619
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ + + DIHIH P GAVPKDGP
Sbjct: 620 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPDFHEKNDIHIHVPEGAVPKDGP 675
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 676 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 735
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 736 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 770
>gi|377576797|ref|ZP_09805781.1| Lon protease [Escherichia hermannii NBRC 105704]
gi|377542829|dbj|GAB50946.1| Lon protease [Escherichia hermannii NBRC 105704]
Length = 784
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 328/765 (42%), Positives = 455/765 (59%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ--------VEQDPDF 115
P G V V++EGL R + LS G +++AR LE IE + + Q +
Sbjct: 84 PDGTVK--VLVEGLQRARITALSDDGEHFSARAEYLESPAIEEREQEVLVRTAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I L+++ + ++ ++ + LAD A + ++ +L+
Sbjct: 142 IKLNKKIPPEVLTSLNSIDDPAR----------------LADTIAAHMPLKLADKQSVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+ RL +++ + ++V ++I +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MSDVNERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKELGEMD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
D D+ AL+RK+ +A MP + EL +LK M P T R Y+E + +PW
Sbjct: 246 DAPDENEALKRKIDAAKMPKEAKEKADAELMKLKMMSPMSAEATVVRSYIEWMVQVPW-N 304
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
A ++ DL+ A+E LD+DHYGL RVK RI+EYLAV+ +GP+LC VGPPGVGKTS
Sbjct: 305 ARSKVKKDLRQAQEILDTDHYGLGRVKDRILEYLAVQSRVNKIKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIARATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVRNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+FVAT+N + IP PLLD
Sbjct: 425 IDKMSSDMRGDPASALLEVLDPEQNVAFNDHYLEVDYDLSDVMFVATSN-SMNIPAPLLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+P+ ++++ L + + ++ + +I+ YTREAGVR
Sbjct: 484 RMEVIRLSGYTEDEKLNIAKRHLLPKQIERNALKKGEITVDDSAIIGIIRYYTREAGVRG 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
L E+E + K V +L LL+ L
Sbjct: 544 L------------------EREISKLCRKAVKQL---LLEKDLKH--------------- 567
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREA--AERVAAPGISVGLVWTNFGGEVQF 653
+ ++ L+ LG RFD A RV G GL WT GG++
Sbjct: 568 ------------IEINGDNLKDFLGVQRFDYGRADNENRV---GQVTGLAWTEVGGDLLT 612
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L TG LG+V++ES Q ALT VRARA L + + + + RDIH+H
Sbjct: 613 IETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLGINS----DFYEKRDIHVHV 668
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GA PKDGPSAG+ + TALVS + VRAD AMTGE+TLRG VLP+GG+K+K+LAAHR
Sbjct: 669 PEGATPKDGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHR 728
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
GIK V++P N +DL E+P V+A L+I KR+E+VL A +
Sbjct: 729 GGIKTVLIPYENKRDLEEIPDNVIADLDIHPVKRIEEVLTLALQN 773
>gi|312143237|ref|YP_003994683.1| ATP-dependent protease La [Halanaerobium hydrogeniformans]
gi|311903888|gb|ADQ14329.1| ATP-dependent protease La [Halanaerobium hydrogeniformans]
Length = 783
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 309/753 (41%), Positives = 452/753 (60%), Gaps = 84/753 (11%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQ---------VEQDPDFIALSRQF 122
VV+EGL R V+ Y+ A + S K+E++ V++ +I +R
Sbjct: 92 VVVEGLERARVKRYIDTEGYFLAEVESCPEEKVEVDTETKALMRTVVKEFEQYIKFNRNL 151
Query: 123 KATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVR 182
A + ++ +E GR LAD+ + ++ +++ +L++ D+ R
Sbjct: 152 PAETIMSVNDIEDP----GR------------LADVISSQIDLKYQQLQELLEATDIIER 195
Query: 183 LSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLV 242
L K ++ ++ +++ + I ++V+ ++ K+QKE+ LR++M+ IK+EL ++ ++
Sbjct: 196 LEKMLAVLRSEIEVLKIEQDINKRVKKKVEKNQKEYYLREKMKVIKDELDEDQGASAEIA 255
Query: 243 ALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDL 302
K++ +P + +++E+++L + P T R YL+ I DLPW S+E ++
Sbjct: 256 EYYEKLEEVDLPEKAAEKIEEEIKKLDRTPNMSPEATVIRNYLDFILDLPW-NISKEDEI 314
Query: 303 DLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAS 362
D+K + E L++DHYGL VK+RIIEYLAVRK+ P + P+LC VG PGVGKTSL SIA
Sbjct: 315 DIKKSDEILEADHYGLEDVKERIIEYLAVRKMAPAKKSPILCLVGAPGVGKTSLGRSIAR 374
Query: 363 ALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSD 422
AL R+F+R+SLGGVKDEA+IRGHRRTYIGS PGR++ +K G NPV LLDE+DK SD
Sbjct: 375 ALNREFVRLSLGGVKDEAEIRGHRRTYIGSRPGRILSAIKDAGTKNPVFLLDEVDKMSSD 434
Query: 423 VRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIEL 482
RGDPASALLEVLDPEQN F+DHYL +PFDLS+V+FV TAN A IP PLLDRME+IE+
Sbjct: 435 FRGDPASALLEVLDPEQNIEFSDHYLELPFDLSEVLFVTTANVAHTIPAPLLDRMELIEI 494
Query: 483 PGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAA 542
PGYT +EKL+IA +HL+P + + HGL + + I + VI+ YTREAGVRNLER LAA
Sbjct: 495 PGYTEDEKLKIAEKHLLPDIYEDHGLKEDQINISSNAIYKVIREYTREAGVRNLERKLAA 554
Query: 543 LARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
+AR A + E ++ L + V +
Sbjct: 555 IARKVAREFLEGRDKKVLVAVNSVEKY--------------------------------- 581
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAA--ERVAAPGISVGLVWTNFGGEVQFVEATAMR 660
LG P ++ ++++ +RV G++ GL + GG++ +E +
Sbjct: 582 ----------------LGLPDYEYQQSSLEDRV---GVATGLAYNQAGGDILDIEVAVVP 622
Query: 661 GKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPK 720
GKGEL LTG LGDV+KESAQ AL++VR++ +L L DG + DIHIH P GAVPK
Sbjct: 623 GKGELTLTGSLGDVMKESAQAALSYVRSKQNELSLT--DG--FYKNFDIHIHVPQGAVPK 678
Query: 721 DGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVI 780
DGPSAG+T+ AL S + ++VR D AMTGE++LRG VLP+GG+K KILA R G+ + I
Sbjct: 679 DGPSAGITIAIALASALTNRKVRGDYAMTGEISLRGRVLPIGGLKTKILAGRRAGLSKFI 738
Query: 781 LPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LP++N + E+ + +E+ M++VLE
Sbjct: 739 LPQKNKNNYEEIDREITKDIEVSFVSHMDEVLE 771
>gi|402771336|ref|YP_006590873.1| Lon protease [Methylocystis sp. SC2]
gi|401773356|emb|CCJ06222.1| Lon protease [Methylocystis sp. SC2]
Length = 807
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 325/758 (42%), Positives = 450/758 (59%), Gaps = 77/758 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG+ R SV+ + YY A + E V D +A + +
Sbjct: 90 PDGTVK--VLVEGVARASVRTYTRADDYYEA----------DAEVVADD---LASPVEVE 134
Query: 124 ATAMELISVLEQKQKTGGRTK-----VLLETVPIHKLADIFVASFEISFEEQLVMLDSVD 178
A +I+ E K R + + KLAD + + E+ +L++V
Sbjct: 135 ALGRSVIAEFESYVKLNKRVSSEVVGAVTQIDDYSKLADTVASHLSVKIAEKQDVLETVS 194
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
+ RL K L++ + ++V ++I +V+ Q+ K+Q+E+ L +QM+AI++ELGD +D +
Sbjct: 195 VARRLEKCLSLMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQMKAIQKELGD-EDGK 253
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
DDL LE ++++ + E ++L++M P T R YL+ I +PW K S+
Sbjct: 254 DDLAELEERIKNTKLSKEARDKAFAEFKKLRQMSPMSAEATVVRNYLDWILSIPWGKRSK 313
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
+ DL A+E LD++HYGL +VK+RI+EYLAV+ GP+LC VGPPGVGKTSL
Sbjct: 314 -VKRDLGQAEEVLDAEHYGLEKVKERILEYLAVQSRANKLTGPILCLVGPPGVGKTSLGK 372
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A GR F+R+SLGGV+DEA+IRGHRRTYIGSMPG++I +++ NP+ LLDEIDK
Sbjct: 373 SIAKATGRDFVRMSLGGVRDEAEIRGHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEIDK 432
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
G D RGDP+SALLEVLDPEQN TFNDHYL V +DLS V+FV TAN IP PL+DRME
Sbjct: 433 MGMDFRGDPSSALLEVLDPEQNATFNDHYLEVDYDLSNVMFVTTANTLN-IPAPLMDRME 491
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
+I + GYT +EKL IA RHLIP + +HGL + I + + +I+RYTREAGVRNLER
Sbjct: 492 IIRIAGYTEDEKLEIARRHLIPSAVHKHGLSPDEWMIADDGLLTLIRRYTREAGVRNLER 551
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
L+ LAR A ++ +++E+ L +S+++ AD
Sbjct: 552 ELSNLARKAVKEILLKKKEKILITSENI------------AD------------------ 581
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
LG P+F E AE G+ GL WT GGE+ +E
Sbjct: 582 -------------------YLGVPKFRYGE-AELEDQVGVVTGLAWTEVGGELLTIEGVM 621
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
M GKG++ +TG L DV+KES A ++VR+RA D + + RD H+H P GA
Sbjct: 622 MPGKGKMTVTGNLRDVMKESISAAASYVRSRAVDFGVEPP----VFDRRDFHVHVPEGAT 677
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TA+VS+ + VR D AMTGE+TLRG VLP+GG+K+K+LAA R G+K+
Sbjct: 678 PKDGPSAGVAMATAIVSIITGIPVRRDIAMTGEITLRGRVLPIGGLKEKLLAALRGGLKK 737
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
V++PE N KDL E+P AV LEI+ RME+VL A
Sbjct: 738 VLIPEENAKDLAEIPDAVKNCLEIVPVARMEEVLRHAL 775
>gi|296331633|ref|ZP_06874102.1| class III heat-shock ATP-dependent LonA protease [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305675408|ref|YP_003867080.1| class III heat-shock ATP-dependent LonA protease [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296151228|gb|EFG92108.1| class III heat-shock ATP-dependent LonA protease [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305413652|gb|ADM38771.1| class III heat-shock ATP-dependent LonA protease [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 774
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/667 (43%), Positives = 423/667 (63%), Gaps = 59/667 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
++ADI + + +++ +L++ D+K RL+K + ++ + + + +KI Q+V+ + +
Sbjct: 162 RMADIVASHLPLKLKDKQDILETADVKDRLNKVIDFINNEKEVLEIEKKIGQRVKRSMER 221
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
+QKE+ LR+QM+AI++ELGD + ++ L K++ AGMP ++ + KEL R +K+
Sbjct: 222 TQKEYYLREQMKAIQKELGDKEGKTGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPS 281
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
+ R Y++ + LPW +++ LDLK A LD +H+GL +VK+RI+EYLAV+K
Sbjct: 282 SSAESSVIRNYIDWLIALPWTDETDD-KLDLKEAGRLLDDEHHGLEKVKERILEYLAVQK 340
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
L +GP+LC GPPGVGKTSLA SIA +LGR+F+RISLGGV+DE++IRGHRRTY+G+M
Sbjct: 341 LTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGREFVRISLGGVRDESEIRGHRRTYVGAM 400
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGR+I G+K+ G NPV LLDEIDK SD RGDP+SA+LEVLDPEQN TF+DHY+ FD
Sbjct: 401 PGRIIQGMKKAGKLNPVFLLDEIDKMSSDFRGDPSSAMLEVLDPEQNSTFSDHYIEETFD 460
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LSKV+F+ATAN IP PL DRME+I + GYT EKL I HL+P+ + +HGL L
Sbjct: 461 LSKVLFIATANNLATIPGPLRDRMEIINIAGYTEVEKLEIVKDHLLPKQIKEHGLKKSNL 520
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
Q+ + + +I+ YTREAGVR+LER LAA+ R AA + +E++
Sbjct: 521 QLRDQAILDIIRYYTREAGVRSLERQLAAICRKAAKAIVAEERK---------------- 564
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPP--RFDDREAAE 631
RIT V+E L+ +G R+ E +
Sbjct: 565 -----------------------------RIT----VNEKNLQDFIGKRIFRYGQAETED 591
Query: 632 RVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARAT 691
+V G+ GL +T GG+ +E + GKG+L LTG+LGDV++ESAQ A ++VR++
Sbjct: 592 QV---GVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTE 648
Query: 692 DLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
+L + + + DIHIH P GAVPKDGPSAG+T+ TALVS + + V + MTGE
Sbjct: 649 ELGIEP----DFHEKYDIHIHVPEGAVPKDGPSAGITMATALVSALTGRAVSREVGMTGE 704
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+K+K L AHR G+ +I P+ N KD+ ++P +V L ILA +++V
Sbjct: 705 ITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKENEKDIEDIPESVREGLTFILASHLDEV 764
Query: 812 LEQAFEG 818
LE A G
Sbjct: 765 LEHALVG 771
>gi|424071464|ref|ZP_17808889.1| ATP-dependent protease La [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|407998844|gb|EKG39242.1| ATP-dependent protease La [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 798
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 329/777 (42%), Positives = 459/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFVEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALTKANAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL + E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEISFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKAV-------------------------------- 552
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
H + F + V MLE LG +F AE+ G
Sbjct: 553 -------------KEHAMEKRFAVQ----VTADMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|424066811|ref|ZP_17804273.1| ATP-dependent protease La [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|408001928|gb|EKG42203.1| ATP-dependent protease La [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 798
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 329/777 (42%), Positives = 459/777 (59%), Gaps = 79/777 (10%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
++ G A L L ++ P G V V++EG R SV+ +Y A ++ ++
Sbjct: 65 YSVGTIATVLQL---LKLPDGTVK--VLVEGEQRGSVERFIEVDGHYRADVALID----- 114
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFV 160
+ A R+ + L++ EQ + G + +VL I +L D
Sbjct: 115 --------EVDAPDRESEVFVRSLLAQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMA 166
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A + E++ +L+ +DL R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L
Sbjct: 167 AHMALKIEQKQEILEIIDLSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYL 226
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
+QM+AI++ELGD D+ +++ L++++ +AG+P + EL +LK+M P T
Sbjct: 227 NEQMKAIQKELGDGDEGHNEIEELKKRIDAAGLPKDALTKANAELNKLKQMSPMSAEATV 286
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R Y++ + +PW KA ++ LDL A+ LD+DHYGL VK+RI+EYLAV+K RG
Sbjct: 287 VRSYIDWLVQVPW-KAQSKVRLDLARAEAILDADHYGLDEVKERILEYLAVQKRVKKIRG 345
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
PVLC VGPPGVGKTSLA SIA+A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI
Sbjct: 346 PVLCLVGPPGVGKTSLAESIANATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQK 405
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+ +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+
Sbjct: 406 MTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFL 465
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
T+N + IPP LLDRMEVI LPGYT +EK+ IA+++L P+ + +GL + E +
Sbjct: 466 CTSN-SMNIPPALLDRMEVIRLPGYTEDEKINIAVKYLSPKQIQANGLKKGEISFDEEAI 524
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
+ +I+ YTREAGVR LER +A + R A
Sbjct: 525 RDIIRYYTREAGVRGLERQIAKVCRKAV-------------------------------- 552
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
H + F + V MLE LG +F AE+ G
Sbjct: 553 -------------KEHAMEKRFAVQ----VTADMLEHFLGVRKF-RYGLAEQQDQIGQVT 594
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT GGE+ +EA + GKG+L TG LGDV+ ES A T VR+RA L + A
Sbjct: 595 GLAWTQVGGELLTIEAAVVSGKGQLIKTGSLGDVMVESITAAQTVVRSRARSLGIPA--- 651
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
+ + D HIH P GA PKDGPSAGV + TALVS ++ VRAD AMTGE+TLRG VL
Sbjct: 652 -DFHEKHDTHIHMPEGATPKDGPSAGVGMCTALVSALTQIPVRADVAMTGEITLRGQVLA 710
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+GG+K+K+LAAHR GIK VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 711 IGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|295706774|ref|YP_003599849.1| ATP-dependent protease LonA [Bacillus megaterium DSM 319]
gi|294804433|gb|ADF41499.1| ATP-dependent protease LonA [Bacillus megaterium DSM 319]
Length = 774
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/763 (40%), Positives = 458/763 (60%), Gaps = 81/763 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSL-EMTKIEMEQ-------VEQDPDF 115
P+G T V++EGL R +V E Y+ + E ++++E ++ +
Sbjct: 82 PNG--TMRVLVEGLNRVTVTEFEDSEEYFVVHVEKQNEEHQVDVEDKALMRTLLDYFEQY 139
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
I LS++ + +S +E+ GR LADI + I + + +L+
Sbjct: 140 IKLSKKVSVETLSTVSDIEEP----GR------------LADIVASHLPIKIQLKQEILE 183
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
D+K RL+ + + +++ +KI Q+V+ + ++QKE+ LR+QM+AI++ELGD +
Sbjct: 184 ITDVKERLNTIISHIQDEQEVLQLEKKIGQRVKKSMERTQKEYYLREQMKAIQKELGDKE 243
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
++ L K++++GM ++ + KEL R +K+ + R Y+E + LPW
Sbjct: 244 GKTGEVATLREKIEASGMTDHVKQVAFKELDRYEKIPATSAESSVIRNYIEWLIALPWTN 303
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
+E+ L++ A++ L+ +HYGL +VK+R++EYLAV++L +GP+LC GPPGVGKTS
Sbjct: 304 ETED-RLNIHNAEQVLNDEHYGLEKVKERVLEYLAVQQLTKSLKGPILCLAGPPGVGKTS 362
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
LA SIA++L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ G NPV LLDE
Sbjct: 363 LARSIATSLDRHFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAGTINPVFLLDE 422
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK +D RGDP+SALLEVLDPEQN F+DHY+ +DLSKV+FVATAN IP PL D
Sbjct: 423 IDKMSNDFRGDPSSALLEVLDPEQNHNFSDHYIEETYDLSKVMFVATANNLATIPGPLRD 482
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RME+I++ GYT EKL IA RHL+ R L+ HGL LQI + + +I+ YTREAGVRN
Sbjct: 483 RMEIIQIAGYTELEKLEIAKRHLLLRQLENHGLQKGNLQIRDDALTAIIRLYTREAGVRN 542
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER +A++ R AA V E+++ + ++K +
Sbjct: 543 LEREIASICRKAARIVVSGEKKRVVVTAKTL----------------------------- 573
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
E+ LG PRF + AE G++ GL +T GG+ +E
Sbjct: 574 --------------------EEFLGKPRFRYGQ-AETEDQVGVATGLAYTTVGGDTLAIE 612
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
+ GKG L LTG+LGDV+KESAQ A ++VR+ A L + + DIHIH P
Sbjct: 613 VSLSPGKGRLVLTGKLGDVMKESAQAAFSYVRSNAEKLGI----DEKFYEKHDIHIHVPE 668
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GAVPKDGPSAG+T+ TALVS + K VR + MTGE+TLRG VLP+GG+K+K L+AHR G
Sbjct: 669 GAVPKDGPSAGITIATALVSALTGKPVRREVGMTGEITLRGRVLPIGGLKEKSLSAHRAG 728
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
+ ++++P N +D+ ++P +V L+I+L ++ VLE A G
Sbjct: 729 LTKILIPHDNERDIEDIPDSVQEELDIVLVSHVDQVLEHALVG 771
>gi|182679145|ref|YP_001833291.1| ATP-dependent protease La [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635028|gb|ACB95802.1| ATP-dependent protease La [Beijerinckia indica subsp. indica ATCC
9039]
Length = 804
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 319/773 (41%), Positives = 459/773 (59%), Gaps = 80/773 (10%)
Query: 49 GVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTA---RISSLEMTKIE 105
G A L L ++ P G V V++EG R VQ + YY A I+ + K+E
Sbjct: 77 GTLASVLQL---LKLPDGTVK--VLVEGQWRAKVQNYTRTEDYYEADAEAIADDPIDKVE 131
Query: 106 MEQVEQD--PDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASF 163
+E + + +F + K + E+++ + Q KLAD +
Sbjct: 132 VEALARSVVSEFEGYVKLNKKISPEVVAAVTQIDDYA-------------KLADTIASHL 178
Query: 164 EISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQ 223
+ ++ +L++ + RL K L++ + ++V ++I +V+ Q+ K+Q+E+ L +Q
Sbjct: 179 AVKIADKQAVLETTSVTKRLEKCLALMESEISVLQVEKRIRTRVKRQMEKTQREYYLNEQ 238
Query: 224 MRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRV 283
M+AI++ELGD +D +DDL +E ++++ + EL++L++M P T R
Sbjct: 239 MKAIQKELGD-EDGKDDLAEIEERIKNTKLSKEARDKATAELKKLRQMSPMSAEATVVRN 297
Query: 284 YLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVL 343
YL+ + +PW K S+ + DL A+E LDS+HYGL +VK+RI+EYLAV+ GP+L
Sbjct: 298 YLDWLLAIPWNKRSK-VKKDLTVAEEVLDSEHYGLDKVKERILEYLAVQTRANKLTGPIL 356
Query: 344 CFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKR 403
C VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRGHRRTYIGSMPG++I +++
Sbjct: 357 CLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRGHRRTYIGSMPGKIIQSMRK 416
Query: 404 VGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATA 463
NP++LLDEIDK G D RGDP+SALLEVLDPEQN+TF+DHYL V +DLS V+FV TA
Sbjct: 417 AKTSNPLLLLDEIDKMGMDFRGDPSSALLEVLDPEQNQTFSDHYLEVDYDLSNVMFVTTA 476
Query: 464 NRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLV 523
N IP PL+DRME+I + GYT +EK+ IA RHLIP L +HGL + I ++ + ++
Sbjct: 477 NTLN-IPAPLMDRMEIIRIAGYTEDEKIEIARRHLIPAALKKHGLDPKEWSIDDSGLTML 535
Query: 524 IQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAE 583
++RYTREAGVRNLER ++ L R A ++ L N++ A
Sbjct: 536 VRRYTREAGVRNLEREISNLIRKAVKQI----------------------LLNKVTSVA- 572
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
+T+ V D LG PR+ E AE G+ GL
Sbjct: 573 --------------------VTADNVAD------FLGVPRYRYGE-AELEDQVGVVTGLA 605
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT GGE+ +E M GKG + +TG L DV+KES A ++VR+RA D + L
Sbjct: 606 WTEVGGELLTIEGVMMPGKGRMTVTGNLKDVMKESISAAASYVRSRAVDFGIEPP----L 661
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
RDIH+H P GA PKDGPSAGV + T + S+ + +R D AMTGE+TLRG VLP+GG
Sbjct: 662 FDRRDIHVHVPEGATPKDGPSAGVAMATTITSVMTGIPIRRDIAMTGEITLRGRVLPIGG 721
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+K+K+LAA R G+K+V++PE N KDL ++P +V +LEI+ RM++VL+ A
Sbjct: 722 LKEKLLAAMRGGLKKVLIPEENAKDLADIPDSVKNALEIVPVSRMDEVLQHAL 774
>gi|194017237|ref|ZP_03055849.1| ATP-dependent protease La [Bacillus pumilus ATCC 7061]
gi|194011105|gb|EDW20675.1| ATP-dependent protease La [Bacillus pumilus ATCC 7061]
Length = 774
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 311/765 (40%), Positives = 458/765 (59%), Gaps = 85/765 (11%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDP---------- 113
P+G T V++EGL R ++ Y + I E+T+ E++ E +
Sbjct: 82 PNG--TIRVLVEGLNRAQIESYVELEDYTSVDIK--ELTEEELKDAEAEALMRTLLDHFD 137
Query: 114 DFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVM 173
+I +S++ A ++ +E+ GR +ADI + + +++ +
Sbjct: 138 QYIKISKKISAETYATVTDIEEP----GR------------MADIVASHLPLKLKDKQEV 181
Query: 174 LDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGD 233
L++VD+K RL++ L+ + + + +KI Q+V+ + ++QKE+ LR+QM+AI++ELGD
Sbjct: 182 LETVDVKKRLNRVISLIHNEKEVLEIEKKIGQRVKRSMERTQKEYYLREQMKAIQKELGD 241
Query: 234 NDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPW 293
+ ++ +L K++ + MP ++ + KEL R +K+ + R Y++ + LPW
Sbjct: 242 KEGKTGEVSSLMSKIEESSMPDSVRETALKELNRYEKIPSSSAESSVIRNYIDWLIGLPW 301
Query: 294 EKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGK 353
+E+ LDLK A E LD +H+GL +VK+R++EYLAV+KL +GP+LC GPPGVGK
Sbjct: 302 GIYTED-RLDLKLASEILDDEHHGLEKVKERVLEYLAVQKLTNSLKGPILCLAGPPGVGK 360
Query: 354 TSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLL 413
TSLA SIA +L RKFIRISLGGV+DE++IRGHRRTY+G+MPGR+I G+ + G NPV LL
Sbjct: 361 TSLAKSIAKSLDRKFIRISLGGVRDESEIRGHRRTYVGAMPGRIIRGMSKAGTMNPVFLL 420
Query: 414 DEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPL 473
DEIDK SD RGDP+SA+LEVLDPEQN F+DHY+ FDLS+V+F+ATAN IP PL
Sbjct: 421 DEIDKMSSDFRGDPSSAMLEVLDPEQNHNFSDHYIEETFDLSQVLFIATANNLATIPGPL 480
Query: 474 LDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGV 533
DRME+I + GYT EK I HL+P+ L +HGL LQ+ EA + I+ YTREAGV
Sbjct: 481 RDRMEIITIAGYTEVEKAEIVKDHLLPKQLKEHGLKKGNLQLREAAIYDTIRYYTREAGV 540
Query: 534 RNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGE 593
R LER LAA+ R AA + +++++ + K++ S L RL
Sbjct: 541 RGLERQLAAICRKAARAIVAEDRKRITVTEKNL----SEFLGKRLY-------------- 582
Query: 594 STHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQF 653
R+ E ++V G+ GL +T GG+
Sbjct: 583 -----------------------------RYGQAETTDQV---GVVTGLAYTTVGGDTLS 610
Query: 654 VEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHF 713
+E + GKG+L LTG+LGDV++ESAQ A +++R++A +L + N + DIHIH
Sbjct: 611 IEVSLSPGKGKLLLTGKLGDVMRESAQAAFSYIRSKADELNI----DPNFNEKHDIHIHV 666
Query: 714 PAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHR 773
P GAVPKDGPSAG+T+ TALVS + + V + MTGE+TLRG VLP+GG+K+K L AHR
Sbjct: 667 PEGAVPKDGPSAGITIATALVSALTGRPVSKEVGMTGEITLRGRVLPIGGLKEKALGAHR 726
Query: 774 YGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
G+K +ILP+ N KD+ ++P +V L I +++VLE+A G
Sbjct: 727 AGLKTIILPKDNEKDIDDIPESVREGLTFIPVSHLDEVLEKALVG 771
>gi|414172079|ref|ZP_11426990.1| ATP-dependent protease La [Afipia broomeae ATCC 49717]
gi|410893754|gb|EKS41544.1| ATP-dependent protease La [Afipia broomeae ATCC 49717]
Length = 810
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 316/749 (42%), Positives = 460/749 (61%), Gaps = 63/749 (8%)
Query: 69 TYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAME 128
T+ V+ G+ RF + E T Y ARI+ + ++++ PD A K A +
Sbjct: 99 THYVICRGVRRFRIDEFLTGFPYLVARITEIGVSEV------MTPDIEARVHLLKMRARD 152
Query: 129 LISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATE 188
I +L G L++ + LAD ++ E+ +L++ D+ + L K
Sbjct: 153 AIGLLPSAPAEIGPAIDSLDSPTM--LADFIAGIIDVPASEKQDLLETFDVTLLLDKLLG 210
Query: 189 LVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKM 248
L+ + +Q ++++++I ++ + LS Q+E +LR+Q+R I++ELGD+D +L L K+
Sbjct: 211 LLAKRIQVLQLSKEIGEQTQQTLSSQQREHILREQLRQIQKELGDDDVKSTELKELAEKI 270
Query: 249 QSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAK 308
AGMP + + ++ELRRL+++ Y R YL+ + +LPW E +D+ A+
Sbjct: 271 DKAGMPKDAEEQARRELRRLERLPETAAEYGMVRSYLDWLVELPWSNLDPE-RIDIAEAR 329
Query: 309 ERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKF 368
LD DHYGL +VK+RI+EYLAVRKL PD + P+LCFVGPPGVGKTSL SIA A GRKF
Sbjct: 330 RILDEDHYGLEKVKRRIVEYLAVRKLNPDGKSPILCFVGPPGVGKTSLGQSIARATGRKF 389
Query: 369 IRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPA 428
+R+SLGGV DE++IRGHRRTYIG++PG +I + + G NPVM+LDE+DK G+ GDPA
Sbjct: 390 VRLSLGGVHDESEIRGHRRTYIGALPGNIIQSIHKAGTRNPVMMLDEMDKLGAGFHGDPA 449
Query: 429 SALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPE 488
+ALLEVLDPEQN TF D+Y+ VPFDL+KV+F+ TAN IP + DRME+IE+PGY +
Sbjct: 450 AALLEVLDPEQNATFRDNYVAVPFDLTKVLFIGTANVIDNIPVAVRDRMEMIEMPGYIED 509
Query: 489 EKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAA 548
EKL IA R+L+ R L GL + Q + +++ +I+ YTREAGVRNLER + A+ R AA
Sbjct: 510 EKLAIARRYLVKRQLAAAGLTEQQCQTSDEVLRAIIRDYTREAGVRNLERRIGAICRHAA 569
Query: 549 VKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPL 608
+++AE + + + D+ +
Sbjct: 570 MRIAEGNATRVIITVTDLQTI--------------------------------------- 590
Query: 609 VVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLT 668
LGP F ++E A R + PG++ GL WT GG++ FVEAT++ G+G+L LT
Sbjct: 591 ----------LGPKLF-EQEIAMRTSVPGVATGLAWTPAGGDILFVEATSIPGRGKLILT 639
Query: 669 GQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVT 728
GQLGDV+KESAQ ALT V++RA + + + Q D+H+H PAGA+PKDGPSAGV
Sbjct: 640 GQLGDVMKESAQAALTLVKSRAAEFGIDPAES----QKSDVHVHVPAGAIPKDGPSAGVA 695
Query: 729 LVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKD 788
+ AL SLF+ + +R+DTAMTGE++LRGLVLP+GGVK+K+LAA + GI V+LP RN KD
Sbjct: 696 MFLALTSLFTGRTIRSDTAMTGEISLRGLVLPIGGVKEKVLAAIQAGITTVMLPARNRKD 755
Query: 789 LVEVPAAVLASLEIILAKRMEDVLEQAFE 817
+ ++P + + +R++D + A
Sbjct: 756 IEDIPENARDRIRFVWLERVDDAIAAALN 784
>gi|397690785|ref|YP_006528039.1| ATP-dependent Lon protease [Melioribacter roseus P3M]
gi|395812277|gb|AFN75026.1| ATP-dependent Lon protease [Melioribacter roseus P3M]
Length = 806
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 290/656 (44%), Positives = 418/656 (63%), Gaps = 49/656 (7%)
Query: 161 ASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLL 220
A+ S E + +L LK +L + +++ ++ +++ ++I KV+ ++K+Q++F++
Sbjct: 182 ANINQSIEVKQKILQHFSLKDQLYEVIRILNSEIEILKIEKEIENKVQENIAKTQRKFII 241
Query: 221 RQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTS 280
++Q+R ++EELGD ++ + V L+ +++ A MP +++ EL +LKK P P T
Sbjct: 242 QEQIRILQEELGDEEEIAPEFVKLKEQIEKAKMPKPVYEKAIDELNKLKKTPPSSPEATV 301
Query: 281 SRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARG 340
R YL+ + +PW K + + +LD+K ++ LD DHYGL + K+RI+E++AV L RG
Sbjct: 302 IRNYLDWLIAVPWHKKTRD-NLDVKNVRKILDEDHYGLEKPKERIVEHIAVLNLVKSMRG 360
Query: 341 PVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDG 400
+LCFVGPPGVGKTSL SIA ALGR F+RISLGGV+DEA+IRGHRRTYIGSMPG++I
Sbjct: 361 QILCFVGPPGVGKTSLGKSIARALGRNFVRISLGGVRDEAEIRGHRRTYIGSMPGKIIQS 420
Query: 401 LKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFV 460
+K+ NPVMLLDEIDK D RGDP+SA+LEVLDPEQN +FNDHYL+V +DLS+V+F+
Sbjct: 421 MKKAKTINPVMLLDEIDKMSMDFRGDPSSAMLEVLDPEQNHSFNDHYLDVDYDLSQVMFI 480
Query: 461 ATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMV 520
TAN IP PL DRME+IELPGY EKL IA RH+IP+ L HGL ++I + +
Sbjct: 481 TTANVRYNIPLPLQDRMEIIELPGYLEFEKLEIAKRHIIPKQLKAHGLDKFKIEIQDEAI 540
Query: 521 KLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLAD 580
K +I YTRE+GVRNLER +A++ R A ++ + P K
Sbjct: 541 KKIINEYTRESGVRNLEREIASVFRKTAHEIVISTNGKKKPKLK---------------- 584
Query: 581 GAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISV 640
+ + +EK LG PRF ++A + + G
Sbjct: 585 ---------------------------ITITPETIEKYLGVPRFRPKKADKELRV-GSVT 616
Query: 641 GLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDG 700
GL WT+ GGE+ V+AT M G+ +L LTGQ+G+V+KESA AL+++R+ A +L L A
Sbjct: 617 GLAWTSVGGEILQVDATVMDGQEKLTLTGQIGNVMKESALAALSYLRSNAKELGLPA--- 673
Query: 701 MNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLP 760
N +G+++HIH P GA+PKDGPSAG+T+ AL S+FS K R D AMTGE+TLRG V+P
Sbjct: 674 -NFHKGKEVHIHLPEGAIPKDGPSAGITMAMALYSVFSGKPARNDVAMTGEITLRGKVIP 732
Query: 761 VGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+GG+ +K+LAA R G+ V++P+ N KDL E+ V L+II + ++D + F
Sbjct: 733 IGGLNEKLLAAQRNGMSIVLIPKDNEKDLTEIKPEVKEGLQIIPIETIKDAIPYVF 788
>gi|420140223|ref|ZP_14647994.1| Lon protease [Pseudomonas aeruginosa CIG1]
gi|403246962|gb|EJY60647.1| Lon protease [Pseudomonas aeruginosa CIG1]
Length = 798
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 308/664 (46%), Positives = 421/664 (63%), Gaps = 56/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+L D A + E++ +L+ DL R+ L+D + ++V ++I +V+ Q+ +
Sbjct: 160 RLVDTMAAHMALKIEQKQDILEITDLSSRVEHVLALLDAEIDLLQVEKRIRGRVKKQMER 219
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELGD D+ +++ L++++ +AG+ EL +LK+M P
Sbjct: 220 SQREYYLNEQMKAIQKELGDIDEGHNEVEELKKRIDAAGLTKEAHTKATAELNKLKQMSP 279
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + ++PW KA ++ DL A++ LD+DHYGL VK+RI+EYLAV+K
Sbjct: 280 MSAEATVVRSYIDWLLNVPW-KAESKVRHDLAKAEDILDADHYGLEEVKERILEYLAVQK 338
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GPVLC VGPPGVGKTSLA SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 339 RVKKLKGPVLCLVGPPGVGKTSLAESIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSM 398
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGRLI + +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +D
Sbjct: 399 PGRLIQKMTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYD 458
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+F+ TAN + IP PLLDRMEVI LPGYT +EK+ IA ++LIP+ + +GL L
Sbjct: 459 LSDVMFLCTAN-SMNIPAPLLDRMEVIRLPGYTADEKVNIASKYLIPKQVQANGLKKGEL 517
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
E ++ +I+ YTREAGVR+LER +A + R A + A+ ++ QA+ SS+
Sbjct: 518 TFEEGALRDIIRYYTREAGVRSLERQIAKVCRKAVKEHAKLKRIQAVVSSE--------- 568
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LE LG +F AE+
Sbjct: 569 ----------------------------------------TLENYLGVRKF-RYGLAEQQ 587
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GGE+ +EA + GKG+L TG LGDV+ ES ALT VR+RA L
Sbjct: 588 DQIGQVTGLAWTQVGGELLTIEAAVVPGKGQLTKTGSLGDVMAESITAALTVVRSRAQSL 647
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ A + + RDIHIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+T
Sbjct: 648 GIAA----DFHEKRDIHIHVPEGATPKDGPSAGIGMCTALVSAITQIPVRADVAMTGEIT 703
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VL +GG+K+K+LAAHR GIK VI+PE N++DL E+P + + L I K +++VL+
Sbjct: 704 LRGQVLAIGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKSDLVIKPVKWIDEVLQ 763
Query: 814 QAFE 817
A +
Sbjct: 764 IALQ 767
>gi|312898489|ref|ZP_07757879.1| ATP-dependent protease La [Megasphaera micronuciformis F0359]
gi|310620408|gb|EFQ03978.1| ATP-dependent protease La [Megasphaera micronuciformis F0359]
Length = 770
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 315/749 (42%), Positives = 453/749 (60%), Gaps = 72/749 (9%)
Query: 72 VVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELIS 131
++++GL R + S R Y LE+ VE+ P+F+ + +A +
Sbjct: 88 ILVDGLYRAVINGFSERAAY-------LEVA------VEEIPEFMGDPMEEEALRRVMYK 134
Query: 132 VLEQ---KQKTGGRTKVLLETVP-IHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKAT 187
E+ + K G L++V LAD V+ + + Q +L++ ++ RL + T
Sbjct: 135 RFEEWLKRVKDGEEITERLQSVDGPGVLADFIVSKLPVQLQVQQQLLETSNVSERLRRVT 194
Query: 188 ELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERK 247
L+D R+ +I+++V Q+ K Q+E+ LR+++R I ELGD D + ++ L
Sbjct: 195 GLLDIETDIARLEAEISKEVRTQIDKQQREYYLREKIRVIHGELGDKVDKDAEVNELRET 254
Query: 248 MQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAA 307
++ A +P + K + KE RL +M P R Y++ + LPW K SE+ + DLK A
Sbjct: 255 IKKAALPEYVEKALLKETDRLDQMPPMMAESAIVRTYIDWVLALPWTKESED-NRDLKNA 313
Query: 308 KERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRK 367
+ L+ DHYGL +VK+RIIEYLAVR+L A+GP+LC VGPPG GKTS+A SIASA+GRK
Sbjct: 314 QTVLEHDHYGLEKVKERIIEYLAVRQLTDSAKGPILCLVGPPGTGKTSIARSIASAMGRK 373
Query: 368 FIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDP 427
++R+SLGGVKDEA+IRGHRRTYIG++PGR+I G+K+ G NPV LLDE+DK SD+RGDP
Sbjct: 374 YVRVSLGGVKDEAEIRGHRRTYIGALPGRIITGMKQAGTKNPVFLLDEVDKLASDLRGDP 433
Query: 428 ASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTP 487
++ALLEVLDPEQN TF DH++++P+DLSKV ++ TAN A IP PLLDRME+I+ YT
Sbjct: 434 SAALLEVLDPEQNDTFTDHFIDLPYDLSKVFWIMTANVAGNIPRPLLDRMEIIDFSSYTE 493
Query: 488 EEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAA 547
+EK++IA ++L+P+ L + GL + ++ +++++ +I+ YTRE+GVR LE+ + A+ R
Sbjct: 494 DEKVQIAKKYLVPKQLKETGLKGKGIKFSDSVLRRIIRDYTRESGVRTLEKTIGAVCRKL 553
Query: 548 AVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSP 607
A V +E +
Sbjct: 554 AKAVLLEEH-------------------------------------------------AD 564
Query: 608 LVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHL 667
L V L LGP +F E ++ A G+ GL WT GGEV E + GKG L L
Sbjct: 565 LSVTVKRLPDFLGPVKFLTPERKQKNAV-GLVTGLAWTQVGGEVLETEVATVPGKGSLIL 623
Query: 668 TGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGV 727
TG+LGDV+KESA A+T+VR RA L L ++ Q DIHIH P GA+PKDGPSAG+
Sbjct: 624 TGRLGDVMKESATAAVTYVRRRAESLDL----PVDFNQKTDIHIHLPEGAIPKDGPSAGI 679
Query: 728 TLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLK 787
T+ TA+ S + + VR D AMTGE+TLRG VLPVGG+K+K++AAHR GIK+++LPE N +
Sbjct: 680 TMATAIASALTGQPVRHDVAMTGEITLRGNVLPVGGIKEKVIAAHRAGIKKILLPEANKR 739
Query: 788 DLVEVPAAVLASLEIILAKRMEDVLEQAF 816
D+ +VP V ++ + M+ VLEQA
Sbjct: 740 DMSDVPQTVKDDVKFVFVNHMDQVLEQAL 768
>gi|222148266|ref|YP_002549223.1| ATP-dependent protease La [Agrobacterium vitis S4]
gi|221735254|gb|ACM36217.1| ATP-dependent protease La [Agrobacterium vitis S4]
Length = 867
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 320/796 (40%), Positives = 455/796 (57%), Gaps = 87/796 (10%)
Query: 29 VQVGASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTR 88
Q+ ASD + I+ G A L L ++ P G V V++EG R + + R
Sbjct: 118 TQINASDDDPSADAIY--EVGTVANVLQL---LKLPDGTVK--VLIEGKARARISGYTGR 170
Query: 89 GTYYTARISSL--------EMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTG 140
+Y A L E+ + V + +++ L+++ + S +E
Sbjct: 171 EDFYEAHADLLPEPAEDPVEVEALSRSVVSEFENYVKLNKKISPEVVGAASQIED----- 225
Query: 141 GRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVA 200
KLAD + I E+ ML++V +K RL KA ++ + ++V
Sbjct: 226 -----------YSKLADTVASHLSIKITEKQEMLETVSIKTRLEKALGFMEGEISVLQVE 274
Query: 201 EKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKH 260
++I +V+ Q+ K+Q+E+ L +QM+AI++ELGD ++ D++ LE ++ +
Sbjct: 275 KRIRSRVKRQMEKTQREYYLNEQMKAIQKELGDGEEGRDEMAELEERIAKTKLSKEAKDK 334
Query: 261 VQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVR 320
EL++LK M P T R YL+ + LPW K S+ + +DL AA++ LD DH+GL +
Sbjct: 335 ADAELKKLKHMSPMSAEATVVRNYLDWLLGLPWNKKSK-VRIDLNAAEKILDEDHFGLDK 393
Query: 321 VKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEA 380
VK+RI+EYLAV+ +GP+LC VGPPGVGKTSLA SIA A GR+++R++LGGV+DEA
Sbjct: 394 VKERIVEYLAVQARATKLKGPILCLVGPPGVGKTSLARSIAKATGREYVRMALGGVRDEA 453
Query: 381 DIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQN 440
+IRGHRRTYIGSMPG+++ +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN
Sbjct: 454 EIRGHRRTYIGSMPGKVVQSMKKAKRSNPLFLLDEIDKMGQDFRGDPSSALLEVLDPEQN 513
Query: 441 KTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIP 500
TF DHYL V +DLS V+F+ TAN IP PL+DRME+I + GYT +EKL+IA RHL+P
Sbjct: 514 ATFMDHYLEVEYDLSNVMFITTANTLN-IPGPLMDRMEIIRIAGYTEDEKLQIAKRHLLP 572
Query: 501 RVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQAL 560
+ + +H L E + + + +IQ+YTREAGVR+LER L +AR A ++ +
Sbjct: 573 KAIKEHALRPEEFSLADDAIVSIIQQYTREAGVRSLERELMKVARKAVTEIIK------- 625
Query: 561 PSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLG 620
G+ST + V A + LG
Sbjct: 626 -------------------------------GKSTS-----------VAVTAASINDYLG 643
Query: 621 PPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQ 680
PR+ EA E GI GL WT GGE+ +E M GKG + +TG L +V+KES
Sbjct: 644 VPRYRHGEA-EGEDQVGIVTGLAWTEVGGELLTIEGVMMPGKGRMTVTGNLKEVMKESIS 702
Query: 681 IALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRK 740
A ++VR+RA D + DIH+H P GA PKDGPSAGV + TA+VS+ +
Sbjct: 703 AAASYVRSRAVDFGIEPPR----FDKSDIHVHVPEGATPKDGPSAGVAMATAIVSIMTGI 758
Query: 741 RVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASL 800
V D AMTGE+TLRG VLP+GG+K+K+LAA R GIK+V++PE N KDL ++P V +L
Sbjct: 759 PVNKDVAMTGEITLRGRVLPIGGLKEKLLAALRGGIKKVLIPEENAKDLADIPDNVKNNL 818
Query: 801 EIILAKRMEDVLEQAF 816
EI+ RM +V+ A
Sbjct: 819 EIVPVARMGEVIAHAL 834
>gi|410618480|ref|ZP_11329425.1| ATP-dependent Lon protease [Glaciecola polaris LMG 21857]
gi|410162022|dbj|GAC33563.1| ATP-dependent Lon protease [Glaciecola polaris LMG 21857]
Length = 788
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 324/762 (42%), Positives = 450/762 (59%), Gaps = 81/762 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARI---SSLEMTKIEME-----QVEQDPDF 115
P G V V++EG R ++E + ++ A I LE+ E E + Q +
Sbjct: 84 PDGTVK--VLVEGNQRGHIEEFVSTEDFFIANIVAKDDLEVEDNEQEVIVRSAISQFEGY 141
Query: 116 IALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLD 175
+ L+++ + +S +EQ + LAD A + E+ +L+
Sbjct: 142 VKLNKKIPPEVLTSLSGIEQAAR----------------LADTMAAHMPLKLAEKQKVLE 185
Query: 176 SVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDND 235
+ RL L++ + ++V +KI +V+ Q+ KSQ+E+ L +QM+AI++ELG+ D
Sbjct: 186 MTQVNERLEYLMALMESEIDLLQVEKKIRTRVKKQMEKSQREYYLNEQMKAIQKELGELD 245
Query: 236 DDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEK 295
+ D+ AL +K+ A MP K EL +LK M P T R Y+E + +PW K
Sbjct: 246 EAPDEFEALSKKIDDAKMPEEAKKKATTELSKLKMMSPMSAEATVVRSYIEWLTSVPWAK 305
Query: 296 ASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTS 355
S + DL AA + LD++HYGL +VK+RIIEYLAV++ +GP+LC VGPPGVGKTS
Sbjct: 306 RSA-VKKDLAAADKLLDTEHYGLEKVKERIIEYLAVQQRVRKLKGPILCLVGPPGVGKTS 364
Query: 356 LASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDE 415
L SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSMPG+LI + +VGV NP+ LLDE
Sbjct: 365 LGQSIAKATGRKYVRMALGGVRDEAEIRGHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDE 424
Query: 416 IDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLD 475
IDK SD+RGDP+SALLEVLDPEQN TF+DHYL V +DLS V+FVAT+N + IP LLD
Sbjct: 425 IDKMSSDMRGDPSSALLEVLDPEQNGTFSDHYLEVDYDLSDVMFVATSN-SMDIPGALLD 483
Query: 476 RMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRN 535
RMEVI L GYT +EKL IA RHL+ + + ++GL ++ L I E+ + +I+ YTREAGVR+
Sbjct: 484 RMEVIRLSGYTEDEKLNIATRHLLDKQIARNGLKAKELVIEESAIMGIIRHYTREAGVRS 543
Query: 536 LERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGEST 595
LER ++ + R A + LL+
Sbjct: 544 LEREISKICRKAVKNI---------------------LLN-------------------- 562
Query: 596 HEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVE 655
+ T + V L LG RF D AE G GL WT GGE+ +E
Sbjct: 563 -------KDTKCVTVTHENLSDYLGVQRF-DYGKAENNNQIGQVTGLAWTQVGGELLTIE 614
Query: 656 ATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPA 715
T++ GKG++ TG LGDV++ES Q A+T VR+RA L++ + + RDIH+H P
Sbjct: 615 TTSVVGKGKMTFTGSLGDVMQESIQTAMTVVRSRAEKLRI----NNDFHEKRDIHVHVPE 670
Query: 716 GAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYG 775
GA PKDGPSAG+ + TALVS + VR D AMTGE+TLRG VL +GG+K+K+LAAHR G
Sbjct: 671 GATPKDGPSAGIAMCTALVSTLTGNPVRCDVAMTGEITLRGEVLAIGGLKEKLLAAHRGG 730
Query: 776 IKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
IK VI+P+ N +DL E+P V L I + ++DVL+ A +
Sbjct: 731 IKTVIIPKENERDLQEIPDNVKQDLSIHPVRWIDDVLQLALQ 772
>gi|15597000|ref|NP_250494.1| Lon protease [Pseudomonas aeruginosa PAO1]
gi|218892243|ref|YP_002441110.1| Lon protease [Pseudomonas aeruginosa LESB58]
gi|254234897|ref|ZP_04928220.1| Lon protease [Pseudomonas aeruginosa C3719]
gi|254240196|ref|ZP_04933518.1| Lon protease [Pseudomonas aeruginosa 2192]
gi|313110500|ref|ZP_07796385.1| Lon protease [Pseudomonas aeruginosa 39016]
gi|386059304|ref|YP_005975826.1| Lon protease [Pseudomonas aeruginosa M18]
gi|386065648|ref|YP_005980952.1| lon protease [Pseudomonas aeruginosa NCGM2.S1]
gi|392984724|ref|YP_006483311.1| ATP-dependent protease La [Pseudomonas aeruginosa DK2]
gi|416854317|ref|ZP_11910795.1| ATP-dependent protease La [Pseudomonas aeruginosa 138244]
gi|418585584|ref|ZP_13149632.1| ATP-dependent protease La [Pseudomonas aeruginosa MPAO1/P1]
gi|418591338|ref|ZP_13155237.1| ATP-dependent protease La [Pseudomonas aeruginosa MPAO1/P2]
gi|419755331|ref|ZP_14281686.1| ATP-dependent protease La [Pseudomonas aeruginosa PADK2_CF510]
gi|421154507|ref|ZP_15614012.1| Lon protease [Pseudomonas aeruginosa ATCC 14886]
gi|421181100|ref|ZP_15638618.1| Lon protease [Pseudomonas aeruginosa E2]
gi|421516444|ref|ZP_15963130.1| ATP-dependent protease La [Pseudomonas aeruginosa PAO579]
gi|424941031|ref|ZP_18356794.1| Lon protease [Pseudomonas aeruginosa NCMG1179]
gi|451982759|ref|ZP_21931061.1| ATP-dependent protease La Type I [Pseudomonas aeruginosa 18A]
gi|9947786|gb|AAG05192.1|AE004606_6 Lon protease [Pseudomonas aeruginosa PAO1]
gi|126166828|gb|EAZ52339.1| Lon protease [Pseudomonas aeruginosa C3719]
gi|126193574|gb|EAZ57637.1| Lon protease [Pseudomonas aeruginosa 2192]
gi|218772469|emb|CAW28251.1| Lon protease [Pseudomonas aeruginosa LESB58]
gi|310882887|gb|EFQ41481.1| Lon protease [Pseudomonas aeruginosa 39016]
gi|334844152|gb|EGM22730.1| ATP-dependent protease La [Pseudomonas aeruginosa 138244]
gi|346057477|dbj|GAA17360.1| Lon protease [Pseudomonas aeruginosa NCMG1179]
gi|347305610|gb|AEO75724.1| Lon protease [Pseudomonas aeruginosa M18]
gi|348034207|dbj|BAK89567.1| lon protease [Pseudomonas aeruginosa NCGM2.S1]
gi|375044273|gb|EHS36882.1| ATP-dependent protease La [Pseudomonas aeruginosa MPAO1/P1]
gi|375049878|gb|EHS42366.1| ATP-dependent protease La [Pseudomonas aeruginosa MPAO1/P2]
gi|384398028|gb|EIE44436.1| ATP-dependent protease La [Pseudomonas aeruginosa PADK2_CF510]
gi|392320229|gb|AFM65609.1| ATP-dependent protease La [Pseudomonas aeruginosa DK2]
gi|404350172|gb|EJZ76509.1| ATP-dependent protease La [Pseudomonas aeruginosa PAO579]
gi|404521908|gb|EKA32462.1| Lon protease [Pseudomonas aeruginosa ATCC 14886]
gi|404544328|gb|EKA53517.1| Lon protease [Pseudomonas aeruginosa E2]
gi|451759536|emb|CCQ83584.1| ATP-dependent protease La Type I [Pseudomonas aeruginosa 18A]
gi|453047166|gb|EME94881.1| ATP-dependent protease La [Pseudomonas aeruginosa PA21_ST175]
Length = 798
Score = 559 bits (1441), Expect = e-156, Method: Compositional matrix adjust.
Identities = 308/664 (46%), Positives = 421/664 (63%), Gaps = 56/664 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+L D A + E++ +L+ DL R+ L+D + ++V ++I +V+ Q+ +
Sbjct: 160 RLVDTMAAHMALKIEQKQDILEITDLSSRVEHVLALLDAEIDLLQVEKRIRGRVKKQMER 219
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELGD D+ +++ L++++ +AG+ EL +LK+M P
Sbjct: 220 SQREYYLNEQMKAIQKELGDIDEGHNEVEELKKRIDAAGLTKEAHTKATAELNKLKQMSP 279
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y++ + ++PW KA ++ DL A++ LD+DHYGL VK+RI+EYLAV+K
Sbjct: 280 MSAEATVVRSYIDWLLNVPW-KAESKVRHDLAKAEDILDADHYGLEEVKERILEYLAVQK 338
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GPVLC VGPPGVGKTSLA SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 339 RVKKLKGPVLCLVGPPGVGKTSLAESIARATNRKFVRMALGGVRDEAEIRGHRRTYIGSM 398
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PGRLI + +VGV NP+ LLDEIDK GSD+RGDPASALLEVLDPEQN FNDHYL V +D
Sbjct: 399 PGRLIQKMTKVGVRNPLFLLDEIDKMGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYD 458
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+F+ TAN + IP PLLDRMEVI LPGYT +EK+ IA ++LIP+ + +GL L
Sbjct: 459 LSDVMFLCTAN-SMNIPAPLLDRMEVIRLPGYTEDEKVNIAAKYLIPKQVQANGLKKGEL 517
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
E ++ +I+ YTREAGVR+LER +A + R A + A+ ++ QA+ SS+
Sbjct: 518 TFEEGALRDIIRYYTREAGVRSLERQIAKVCRKAVKEHAKLKRIQAVVSSE--------- 568
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LE LG +F AE+
Sbjct: 569 ----------------------------------------TLENYLGVRKF-RYGLAEQQ 587
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GGE+ +EA + GKG+L TG LGDV+ ES ALT VR+RA L
Sbjct: 588 DQIGQVTGLAWTQVGGELLTIEAAVVPGKGQLTKTGSLGDVMAESITAALTVVRSRAQSL 647
Query: 694 QLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMT 753
+ A + + RDIHIH P GA PKDGPSAG+ + TALVS ++ VRAD AMTGE+T
Sbjct: 648 GIAA----DFHEKRDIHIHVPEGATPKDGPSAGIGMCTALVSAITQIPVRADVAMTGEIT 703
Query: 754 LRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLE 813
LRG VL +GG+K+K+LAAHR GIK VI+PE N++DL E+P + + L I K +++VL+
Sbjct: 704 LRGQVLAIGGLKEKLLAAHRGGIKTVIIPEENVRDLKEIPDNIKSDLVIKPVKWIDEVLQ 763
Query: 814 QAFE 817
A +
Sbjct: 764 IALQ 767
>gi|384182290|ref|YP_005568052.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324328374|gb|ADY23634.1| ATP-dependent protease La 1 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 773
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 313/755 (41%), Positives = 455/755 (60%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 81 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTI------TEEVEADLEEKALMRTLL 132
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ + +K RL
Sbjct: 133 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIISVKERL 190
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 191 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 250
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 251 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYMDWLLALPWTEATEDM-ID 309
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 310 LAHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 369
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 370 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKSVNPVFLLDEIDKMSNDF 429
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 430 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 489
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 490 GYTELEKVHIAREHLLPKQLQEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 549
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R AA + E+++ + + K+
Sbjct: 550 CRKAAKIIVTAERKRIVVTEKN-------------------------------------- 571
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
VVD +LG F +A E+ G++ GL +T GG+ +E + GKG
Sbjct: 572 -----VVD------LLGKHIFRYGQA-EKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 619
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ + + DIHIH P GAVPKDGP
Sbjct: 620 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPDFHEKNDIHIHVPEGAVPKDGP 675
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 676 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 735
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 736 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 770
>gi|118590044|ref|ZP_01547448.1| probable atp-dependent protease la protein [Stappia aggregata IAM
12614]
gi|118437541|gb|EAV44178.1| probable atp-dependent protease la protein [Stappia aggregata IAM
12614]
Length = 809
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 321/786 (40%), Positives = 457/786 (58%), Gaps = 74/786 (9%)
Query: 32 GASDGKNQQEVIHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTY 91
A D N ++ +N G A L L ++ P V V++EG R + + + R Y
Sbjct: 64 AADDDPNPDQI---YNVGTLATVLQL---LKLPDNTVK--VLVEGGARAQIGDYTDRTDY 115
Query: 92 YTARISSLEMTKIEMEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVP 151
+ A + L E+D + I + ++ E + ++ +K + +
Sbjct: 116 FEASATVLP---------ERDGENIEVEALARSVVSEFENYVKLNKKVSPEVLGAINQID 166
Query: 152 IH-KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQ 210
+ KLAD + I E+ +L V + RL + +++ + ++V ++I +V+ Q
Sbjct: 167 DYSKLADTVASHLAIKIPEKQEILGVVSVAERLERVLGMMESEISVLQVEKRIRSRVKRQ 226
Query: 211 LSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKK 270
+ K+Q+E+ L +QM+AI++ELGD++D D++ LE K++ + + E+++LK+
Sbjct: 227 MEKTQREYYLNEQMKAIQKELGDSEDGRDEIAELEDKIKKTKLTKEARERAAAEIKKLKQ 286
Query: 271 MQPQQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLA 330
M P T R YL+ + +PW K S+ + DL +++ LD+DHYGL +VK+RI+EYLA
Sbjct: 287 MSPMSAEATVVRNYLDWLIGIPWNKKSK-VKHDLAFSEKVLDTDHYGLEKVKERIVEYLA 345
Query: 331 VRKLKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYI 390
V+ RGP+LC VGPPGVGKTSL SIA A GR+F+R+SLGGV+DEA+IRGHRRTYI
Sbjct: 346 VQSRANKLRGPILCLVGPPGVGKTSLGKSIAKATGREFVRMSLGGVRDEAEIRGHRRTYI 405
Query: 391 GSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNV 450
GSMPG++I +K+ NP+ LLDEIDK G D RGDP+SALLEVLDPEQN +F DHYL V
Sbjct: 406 GSMPGKVIQSMKKAKKSNPLFLLDEIDKMGMDFRGDPSSALLEVLDPEQNSSFMDHYLEV 465
Query: 451 PFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGS 510
+DLS V+FV TAN IP PL+DRMEVI + GYT EEK+ I RHLIP+ HGL
Sbjct: 466 EYDLSDVMFVTTANTLN-IPGPLMDRMEVIRIAGYTEEEKVEICRRHLIPKAEKDHGLRE 524
Query: 511 EFLQIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLG 570
I + + +++RYTREAGVRNLER +A LAR A + ++E
Sbjct: 525 GEFTIEDEALHFIVRRYTREAGVRNLEREMATLARKAVKDILMSDKE------------- 571
Query: 571 SPLLDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAA 630
+ +TS +V EK LG PR+ E A
Sbjct: 572 ------------------------------SVTVTSEVV------EKYLGVPRYRYGE-A 594
Query: 631 ERVAAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARA 690
E G+ GL WT GGE+ +E M GKG++ +TG L DV+KES A ++VR+RA
Sbjct: 595 ELEDQVGVVTGLAWTEVGGELLTIEGVMMPGKGKMTVTGNLKDVMKESISAAASYVRSRA 654
Query: 691 TDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTG 750
D + + +DIH+H P GA PKDGPSAG+ + TA++S + VR D AMTG
Sbjct: 655 IDYGIEPP----TFEKKDIHVHVPEGATPKDGPSAGIAMATAVISTMTGIPVRRDVAMTG 710
Query: 751 EMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMED 810
E+TLRG +LP+GG+K+K+LAA R GIK V++PE N KDL ++P +V SLEII ME+
Sbjct: 711 EITLRGRILPIGGLKEKLLAALRGGIKLVMIPEDNAKDLADIPDSVKNSLEIIPVSGMEE 770
Query: 811 VLEQAF 816
VL+ A
Sbjct: 771 VLKNAL 776
>gi|365158736|ref|ZP_09354928.1| lon protease [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411735|ref|ZP_17388855.1| lon protease [Bacillus cereus BAG3O-2]
gi|423432479|ref|ZP_17409483.1| lon protease [Bacillus cereus BAG4O-1]
gi|363626609|gb|EHL77592.1| lon protease [Bacillus sp. 7_6_55CFAA_CT2]
gi|401104601|gb|EJQ12574.1| lon protease [Bacillus cereus BAG3O-2]
gi|401116086|gb|EJQ23929.1| lon protease [Bacillus cereus BAG4O-1]
Length = 776
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/755 (41%), Positives = 451/755 (59%), Gaps = 65/755 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I + E+VE D + A R
Sbjct: 84 PNG--TLRVLVEGLHRAEVIEFIEEENVVQVSIKKV------TEEVEDDLEEKAFMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 QTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E+I +D
Sbjct: 254 LREKIEQSGMPEETMKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDI-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L++DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LAHSEEILNNDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR++ G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIVQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTFR 603
R A + E+++
Sbjct: 553 CRKVAKIIVTAERKR--------------------------------------------- 567
Query: 604 ITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGKG 663
+VV E + +LG F + AE+ G++ GL +T GG+ +E + GKG
Sbjct: 568 ----IVVTEKKIVDLLGKHIFRYGQ-AEKTDQVGMATGLAYTAAGGDTLAIEVSVAPGKG 622
Query: 664 ELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDGP 723
+L LTG+LGDV+KESAQ A +++R+RA +LQ+ N + DIHIH P GAVPKDGP
Sbjct: 623 KLILTGKLGDVMKESAQAAFSYIRSRAEELQI----DPNFHEKNDIHIHVPEGAVPKDGP 678
Query: 724 SAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPE 783
SAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 679 SAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILPA 738
Query: 784 RNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 739 ENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
>gi|167624684|ref|YP_001674978.1| ATP-dependent protease La [Shewanella halifaxensis HAW-EB4]
gi|167354706|gb|ABZ77319.1| ATP-dependent protease La [Shewanella halifaxensis HAW-EB4]
Length = 785
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 307/666 (46%), Positives = 428/666 (64%), Gaps = 59/666 (8%)
Query: 154 KLADIFVASFEISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSK 213
+LAD A + E++ +L+ V++ R+ +++ + ++V ++I +V+ Q+ K
Sbjct: 164 RLADTMAAHMPLKLEDKQSVLEMVNVSERIEYLMAMMESEIDLLQVEKRIRSRVKKQMEK 223
Query: 214 SQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQP 273
SQ+E+ L +QM+AI++ELGD D+ D+ +L +K++ A MP+ + EL +LK M P
Sbjct: 224 SQREYYLNEQMKAIQKELGDIDESHDEFESLAKKIEEAQMPTEAKEKASAELNKLKMMSP 283
Query: 274 QQPGYTSSRVYLELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRK 333
T R Y+E + +PW K S+ I DL A++ LD+DH+GL +VK+RI+EYLAV+
Sbjct: 284 MSAEATVVRSYVEWMVSVPWHKRSK-IKRDLAKAQDVLDTDHFGLEKVKERILEYLAVQS 342
Query: 334 LKPDARGPVLCFVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSM 393
+GP+LC VGPPGVGKTSL SIA A GRK++R++LGGV+DEA+IRGHRRTYIGSM
Sbjct: 343 RVKQLKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRVALGGVRDEAEIRGHRRTYIGSM 402
Query: 394 PGRLIDGLKRVGVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFD 453
PG++I + +VGV NP+ LLDEIDK SD+RGDPASALLEVLDPEQN F+DHY+ V +D
Sbjct: 403 PGKVIQKMSKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNSAFSDHYMEVDYD 462
Query: 454 LSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFL 513
LS V+FVAT+N + IP PLLDRMEVI L GYT +EKL IA +HL+P+ ++++GL ++ +
Sbjct: 463 LSDVMFVATSN-SMNIPGPLLDRMEVIRLSGYTEDEKLNIAKQHLLPKQIERNGLKAKEV 521
Query: 514 QIPEAMVKLVIQRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPL 573
+ ++ + +I+ YTREAGVR LER L+ + R KV +Q L
Sbjct: 522 TVDDSAIIGIIRYYTREAGVRALERELSKICR----KVVKQ-----------------IL 560
Query: 574 LDNRLADGAEVEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERV 633
LD + VE V++ L+ LG R D AE
Sbjct: 561 LDKSI---KHVE------------------------VNQDNLKSFLGVQRC-DYGKAESN 592
Query: 634 AAPGISVGLVWTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDL 693
G GL WT GG++ +EAT++ GKG+L TG LGDV++ES Q A+T VRARA L
Sbjct: 593 NQIGQVTGLAWTEVGGDLLTIEATSVPGKGKLTYTGSLGDVMQESIQAAMTVVRARAEQL 652
Query: 694 QLVAEDGMN--LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGE 751
G+N + RDIH+H P GA PKDGPSAG + TALVS + VRAD AMTGE
Sbjct: 653 ------GINPDFYEKRDIHVHVPEGATPKDGPSAGAAMCTALVSSLTGNPVRADVAMTGE 706
Query: 752 MTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDV 811
+TLRG VLP+GG+K+K+LAAHR G K V++P+ N +DL E+P V+A L+I K +++V
Sbjct: 707 ITLRGEVLPIGGLKEKLLAAHRGGTKVVLIPKENERDLEEIPQNVIADLKIYPVKWVDEV 766
Query: 812 LEQAFE 817
L+ A E
Sbjct: 767 LKLALE 772
>gi|146300504|ref|YP_001195095.1| ATP-dependent protease La [Flavobacterium johnsoniae UW101]
gi|302425055|sp|A5FG89.1|LON_FLAJ1 RecName: Full=Lon protease; AltName: Full=ATP-dependent protease La
gi|146154922|gb|ABQ05776.1| ATP-dependent protease La; peptidase family S16 [Flavobacterium
johnsoniae UW101]
Length = 817
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 317/773 (41%), Positives = 450/773 (58%), Gaps = 71/773 (9%)
Query: 46 HNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIE 105
H G AR L R ++ P G VT V+L+G RF + E+ + Y TA I + E
Sbjct: 102 HKIGTVARIL---RVLKMPDGNVT--VILQGKKRFEIDEVVSEEPYMTASIKEVS----E 152
Query: 106 MEQVEQDPDFIALSRQFKATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVAS-FE 164
E D +F A+ K A+++I ++ ++ + FV+S
Sbjct: 153 ERPDENDSEFTAILDSVKELAIQII---KESPNIPSEATFAIKNIESQSFLINFVSSNMN 209
Query: 165 ISFEEQLVMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQM 224
+S +E+ +L LK R + ++ LQ + + I KV L + Q+E+ L QQM
Sbjct: 210 LSVKEKQGLLSINGLKERALETLRYMNVELQKLELKNDIQSKVRFDLDQQQREYFLHQQM 269
Query: 225 RAIKEELGDNDDDEDDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVY 284
+ I+EELG E+++ + +K ++ KH +KEL ++++M PQ P + R Y
Sbjct: 270 KTIQEELG-GVSQEEEMDEMGQKAKTKKWDEKTQKHFEKELSKMRRMNPQSPDFGIQRNY 328
Query: 285 LELIADLPWEKASEEIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLC 344
LEL +LPW + S++ DLK A++ LD DH+GL VK+R+IE+LAV KL+ D + P++C
Sbjct: 329 LELFLELPWGEYSKD-KFDLKHAQKVLDKDHFGLDEVKKRMIEHLAVLKLRNDMKSPIIC 387
Query: 345 FVGPPGVGKTSLASSIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRV 404
GPPGVGKTS+ S+A ALGR+++RISLGG++DEA+IRGHR+TYIG+MPGR+I LK+
Sbjct: 388 LTGPPGVGKTSIGRSVAEALGREYVRISLGGLRDEAEIRGHRKTYIGAMPGRIIQSLKKA 447
Query: 405 GVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATAN 464
G NPV +LDEIDK S GDP+SALLEVLDPEQN F D++L + +DLSKV+F+AT+N
Sbjct: 448 GTSNPVFILDEIDKLSSGNSGDPSSALLEVLDPEQNNAFYDNFLEMGYDLSKVMFIATSN 507
Query: 465 RAQPIPPPLLDRMEVIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVI 524
I P L DRMEVI++ GYT EEK+ IA RHL P+ L+ HGL S+ L I + ++ ++
Sbjct: 508 NMAAIQPALRDRMEVIKMSGYTIEEKVEIAKRHLFPKQLEAHGLTSKDLTIGKKQLEKIV 567
Query: 525 QRYTREAGVRNLERNLAALARAAAVKVAEQEQEQALPSSKDVHR-LGSPLLDNRLADGAE 583
+ YTRE+GVRNLE +A + R AA VA +E+ + +D+ + LG P L
Sbjct: 568 EGYTRESGVRNLETKIAQVIRNAAKAVAMEEEYNKKVTDEDIVKVLGVPRL--------- 618
Query: 584 VEMEVIPMGESTHEVSNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLV 643
+R+ E G+ GL
Sbjct: 619 ------------------------------------------ERDKYENNDVAGVVTGLA 636
Query: 644 WTNFGGEVQFVEATAMRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNL 703
WT+ GG++ F+E+ GKG L +TG LG+V+KESA IAL +++A A L L E L
Sbjct: 637 WTSVGGDILFIESLISEGKGALTITGNLGNVMKESATIALEYIKANAKKLGLAIE----L 692
Query: 704 LQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGG 763
Q +IH+H P GA PKDGPSAG+ ++T+LVSL ++K+V+ AMTGE+TLRG VLPVGG
Sbjct: 693 FQKYNIHLHVPEGATPKDGPSAGIAMLTSLVSLLTQKKVKKSLAMTGEITLRGKVLPVGG 752
Query: 764 VKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAF 816
+K+KILAA R GIK +IL N D+ E+ L L K M +VL A
Sbjct: 753 IKEKILAAKRAGIKEIILCHENKSDIDEIKEEYLEGLTFHYVKEMSEVLAIAL 805
>gi|398849721|ref|ZP_10606450.1| ATP-dependent protease La [Pseudomonas sp. GM80]
gi|398250436|gb|EJN35756.1| ATP-dependent protease La [Pseudomonas sp. GM80]
Length = 798
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 327/759 (43%), Positives = 452/759 (59%), Gaps = 76/759 (10%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P G V V++EG R +V+ S + A +S +E + A R+ +
Sbjct: 80 PDGTVK--VLVEGEQRGTVERFSEVDGHCRAEVSLIE-------------EVDAAERESE 124
Query: 124 ATAMELISVLEQKQKTGGRT--KVLLETVPIH---KLADIFVASFEISFEEQLVMLDSVD 178
L+S EQ + G + +VL I +L D A + E++ +L+ +D
Sbjct: 125 VFVRTLLSQFEQYVQLGKKVPAEVLSSLNSIDEPGRLVDTMAAHMALKIEQKQEILEIID 184
Query: 179 LKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDE 238
L R+ L+D + ++V ++I +V+ Q+ +SQ+E+ L +QM+AI++ELGD+D+
Sbjct: 185 LSARVEHVLALLDAEIDLLQVEKRIRGRVKKQMERSQREYYLNEQMKAIQKELGDSDEGH 244
Query: 239 DDLVALERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASE 298
+++ L++++ +AG+P + EL +LK+M P T R Y++ + +PW KA
Sbjct: 245 NEIEDLKKRIDAAGLPKDALAKATAELNKLKQMSPMSAEATVVRSYIDWLVQVPW-KAQS 303
Query: 299 EIDLDLKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLAS 358
++ LDL A++ LD+DHYGL VK+RI+EYLAV+K RGPVLC VGPPGVGKTSLA
Sbjct: 304 KVRLDLARAEDILDADHYGLEEVKERILEYLAVQKRVKKIRGPVLCLVGPPGVGKTSLAE 363
Query: 359 SIASALGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDK 418
SIA A RKF+R++LGGV+DEA+IRGHRRTYIGSMPGRLI + +VGV NP+ LLDEIDK
Sbjct: 364 SIAHATNRKFVRMALGGVRDEAEIRGHRRTYIGSMPGRLIQKMTKVGVRNPLFLLDEIDK 423
Query: 419 TGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRME 478
GSD+RGDPASALLEVLDPEQN FNDHYL V +DLS V+F+ T+N + IPP LLDRME
Sbjct: 424 MGSDMRGDPASALLEVLDPEQNHNFNDHYLEVDYDLSDVMFLCTSN-SMNIPPALLDRME 482
Query: 479 VIELPGYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLER 538
VI LPGYT +EK+ IA+++L P+ + +GL L+ ++ +I+ YTREAGVR LER
Sbjct: 483 VIRLPGYTEDEKINIAVKYLSPKQIAANGLKKGELEFDAEAIRDIIRYYTREAGVRGLER 542
Query: 539 NLAALARAAAVKVAEQEQEQALPSSKDVHRLGSPLLDNRLADGAEVEMEVIPMGESTHEV 598
+A + R A H +
Sbjct: 543 QIAKVCRKAV---------------------------------------------KEHAL 557
Query: 599 SNTFRITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATA 658
F + V LE LG +F AE+ G GL WT GGE+ +EA
Sbjct: 558 EKRFSVK----VTADALEHFLGVRKF-RYGLAEQQDQIGQVTGLAWTQVGGELLTIEAAV 612
Query: 659 MRGKGELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAV 718
+ GKG+L TG LGDV+ ES ALT VR+RA L + ++ + RD HIH P GA
Sbjct: 613 VPGKGQLIKTGSLGDVMVESITAALTVVRSRAKSLGI----PVDFHEKRDTHIHMPEGAT 668
Query: 719 PKDGPSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKR 778
PKDGPSAGV + TALVS + VRAD AMTGE+TLRG VL +GG+K+K+LAAHR GIK
Sbjct: 669 PKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKEKLLAAHRGGIKI 728
Query: 779 VILPERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFE 817
VI+PE N++DL E+P + L+I K +++VL+ A +
Sbjct: 729 VIIPEENVRDLKEIPDNIKQDLQIKPVKWIDEVLQIALQ 767
>gi|407706998|ref|YP_006830583.1| NAD-dependent malic enzyme 4 [Bacillus thuringiensis MC28]
gi|423547771|ref|ZP_17524129.1| lon protease [Bacillus cereus HuB5-5]
gi|423615137|ref|ZP_17590971.1| lon protease [Bacillus cereus VD115]
gi|401178208|gb|EJQ85388.1| lon protease [Bacillus cereus HuB5-5]
gi|401261993|gb|EJR68144.1| lon protease [Bacillus cereus VD115]
gi|407384683|gb|AFU15184.1| ATP-dependent protease La 1 [Bacillus thuringiensis MC28]
Length = 776
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 312/756 (41%), Positives = 453/756 (59%), Gaps = 67/756 (8%)
Query: 64 PSGRVTYIVVLEGLCRFSVQELSTRGTYYTARISSLEMTKIEMEQVEQDPDFIALSRQFK 123
P+G T V++EGL R V E I ++ E+VE D + AL R
Sbjct: 84 PNG--TLRVLVEGLHRAEVVEFIEEENVVQVSIKTV------TEEVEDDLEEKALMRTLL 135
Query: 124 ATAMELISVLEQKQKTGGRTKVLLETVPIHKLADIFVASFEISFEEQLVMLDSVDLKVRL 183
+ I V K+ + + + +LAD+ + I +++ +L+ V +K RL
Sbjct: 136 EHFEQYIKV--SKKVSNETFATVADVEEPGRLADLIASHLPIKTKQKQEILEIVSVKERL 193
Query: 184 SKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVA 243
++ + + + +KI QKV+ + ++QKE+ LR+QM+AI+ ELGD + ++
Sbjct: 194 HTLISIIQDEQELLSLEKKIGQKVKRSMERTQKEYFLREQMKAIQTELGDKEGKGGEVEE 253
Query: 244 LERKMQSAGMPSNIWKHVQKELRRLKKMQPQQPGYTSSRVYLELIADLPWEKASEEIDLD 303
L K++ +GMP K KEL R +K+ R Y++ + LPW +A+E++ +D
Sbjct: 254 LREKIEQSGMPEETTKAALKELDRYEKLPASSAESGVIRNYIDWLLALPWTEATEDM-ID 312
Query: 304 LKAAKERLDSDHYGLVRVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIASA 363
L ++E L+ DHYGL +VK+R++EYLAV+KL +GP+LC VGPPGVGKTSLA SIA++
Sbjct: 313 LVHSEEILNKDHYGLEKVKERVLEYLAVQKLTNSLKGPILCLVGPPGVGKTSLARSIATS 372
Query: 364 LGRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVGVCNPVMLLDEIDKTGSDV 423
L R F+R+SLGGV+DE++IRGHRRTY+G+MPGR+I G+K+ NPV LLDEIDK +D
Sbjct: 373 LNRNFVRVSLGGVRDESEIRGHRRTYVGAMPGRIIQGMKKAKTVNPVFLLDEIDKMSNDF 432
Query: 424 RGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELP 483
RGDP++ALLEVLDPEQN F+DHY+ P+DLSKV+FVATAN IP PLLDRME+I +
Sbjct: 433 RGDPSAALLEVLDPEQNHNFSDHYIEEPYDLSKVMFVATANTLSSIPGPLLDRMEIISIA 492
Query: 484 GYTPEEKLRIAMRHLIPRVLDQHGLGSEFLQIPEAMVKLVIQRYTREAGVRNLERNLAAL 543
GYT EK+ IA HL+P+ L +HGL LQ+ + + +I+ YTREAGVR LER +A +
Sbjct: 493 GYTELEKVHIAREHLLPKQLKEHGLRKGNLQVRDEALLEIIRYYTREAGVRTLERQIAKV 552
Query: 544 ARAAAVKVAEQEQEQALPSSKD-VHRLGSPLLDNRLADGAEVEMEVIPMGESTHEVSNTF 602
R AA + E+++ + + K+ V LG +
Sbjct: 553 CRKAAKIIVTAERKRIVVTEKNIVDLLGKHIF---------------------------- 584
Query: 603 RITSPLVVDEAMLEKVLGPPRFDDREAAERVAAPGISVGLVWTNFGGEVQFVEATAMRGK 662
R+ E ++V G++ GL +T GG+ +E + GK
Sbjct: 585 --------------------RYGQAEKTDQV---GMATGLAYTAAGGDTLAIEVSVAPGK 621
Query: 663 GELHLTGQLGDVIKESAQIALTWVRARATDLQLVAEDGMNLLQGRDIHIHFPAGAVPKDG 722
G+L LTG+LGDV+KESAQ A +++R+RA +L + N + DIHIH P GAVPKDG
Sbjct: 622 GKLILTGKLGDVMKESAQAAFSYIRSRAEELHI----DPNFHEKNDIHIHVPEGAVPKDG 677
Query: 723 PSAGVTLVTALVSLFSRKRVRADTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILP 782
PSAG+T+ TAL+S + V + MTGE+TLRG VLP+GG+K+K L+AHR G+ ++ILP
Sbjct: 678 PSAGITMATALISALTGIPVSKEVGMTGEITLRGRVLPIGGLKEKTLSAHRAGLTKIILP 737
Query: 783 ERNLKDLVEVPAAVLASLEIILAKRMEDVLEQAFEG 818
N KDL ++P +V +L +LA +++VLE A G
Sbjct: 738 AENEKDLDDIPESVKENLTFVLASHLDEVLEHALVG 773
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,477,097,066
Number of Sequences: 23463169
Number of extensions: 527280572
Number of successful extensions: 1983910
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7112
Number of HSP's successfully gapped in prelim test: 18951
Number of HSP's that attempted gapping in prelim test: 1938229
Number of HSP's gapped (non-prelim): 44700
length of query: 828
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 677
effective length of database: 8,816,256,848
effective search space: 5968605886096
effective search space used: 5968605886096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)