BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003353
(827 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SAK0|PP132_ARATH Pentatricopeptide repeat-containing protein At1g79490,
mitochondrial OS=Arabidopsis thaliana GN=EMB2217 PE=2
SV=1
Length = 836
Score = 1341 bits (3471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 648/836 (77%), Positives = 727/836 (86%), Gaps = 18/836 (2%)
Query: 1 MIR-RVKKLCPRNLYLSLTKNPNFRYPFHSNFIHHLDFNHKFIKNTSFSSRL-DYGETQN 58
MIR R K+ PRN+ +L+++ P I N K + SF+ RL Y +N
Sbjct: 1 MIRGRTAKVIPRNVIFTLSRSSISESPL----ISPSRINPKLAGSFSFNIRLLSYFTVRN 56
Query: 59 -FVKDAIFFRKPNYV----------RSYCSGKSGDGEKCNEWTEEIEYLDESGSVIYTGK 107
F D R PN+V R +CS K G E WTEE+EYLDESGSV+++GK
Sbjct: 57 GFCPDCSVPRDPNFVGLTTQCRSIVRRFCSEKIGSSESSG-WTEEVEYLDESGSVLHSGK 115
Query: 108 GIRSVEPGFDDHVMVGGIKKPFLNASAVAKIVEVVNRWKWGPELETQLDKLQFVPKMVHI 167
GIRSVEPG DDHVMVGG+KKP++NAS+VAKIVEVV RWKWGPELETQLDKLQFVP MVHI
Sbjct: 116 GIRSVEPGLDDHVMVGGLKKPYMNASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHI 175
Query: 168 TQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDS 227
TQ+LK++ + D +LSLFRWAK+Q WY+P DECYV+LFD LN+ RDF G+ SLF+EMV DS
Sbjct: 176 TQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDS 235
Query: 228 SKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPY 287
S +G F+AYN+VIQYLAKA+KLE+++CCFKK +S CKIDTQ+YN LM LFLNKGLPY
Sbjct: 236 SSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPY 295
Query: 288 KAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLV 347
KAFEIYESMEK + LDGSTYEL+IPSLAKSGRLDAA KLFQ+MKER RPSF++F+SLV
Sbjct: 296 KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV 355
Query: 348 DSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFR 407
DSMGKAGRLDTSMKVYMEMQG GHRPSA M+VSLI+SYAKAGKLDTALRLWDEM+ +GFR
Sbjct: 356 DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFR 415
Query: 408 PNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKL 467
PNFGL+TMIIESHAKSGKL++AM++F DME+AGFLPTPSTYSCLLEMHA SGQVDSAMK+
Sbjct: 416 PNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 475
Query: 468 YNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIKD 527
YNSMT+AGLRPGLS+Y +LLTLLA ++LVDVA KILLEMK MGYSVDV ASDVLM+YIKD
Sbjct: 476 YNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKD 535
Query: 528 GSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLY 587
SVD AL+WLRFMGSSGI+TNNFI+RQLFESCMKN LY+SA+PLLET V SA KVDLVLY
Sbjct: 536 ASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLY 595
Query: 588 TSVLAHLVRCQDEQNERHLMAILSATKHKAHAFLCGLFTGPEQRKQPVLSFVREFFHGID 647
TS+LAHLVRCQDE ER LM+ILSATKHKAHAF+CGLFTGPEQRKQPVL+FVREF+ GID
Sbjct: 596 TSILAHLVRCQDEDKERQLMSILSATKHKAHAFMCGLFTGPEQRKQPVLTFVREFYQGID 655
Query: 648 YELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNL 707
YELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNL
Sbjct: 656 YELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNL 715
Query: 708 SVGAALIAVMHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESPFEVSKVVL 767
SVGAALIAV+HTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESPFEVSKVVL
Sbjct: 716 SVGAALIAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIAQMLSSVESPFEVSKVVL 775
Query: 768 RAPGDSVMEWFKKPIVQQFLLNEIPSRADILMHKMNILFPCSAPELRSLSPPKPLI 823
RAPG+ VMEWFKKPIVQQFLLNEIPSR+DILMHKMN++FP SAPELRS+SPPKPL+
Sbjct: 776 RAPGELVMEWFKKPIVQQFLLNEIPSRSDILMHKMNVMFPSSAPELRSMSPPKPLM 831
>sp|Q8GYP6|PPR49_ARATH Pentatricopeptide repeat-containing protein At1g18900
OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1
Length = 860
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 233/471 (49%), Gaps = 19/471 (4%)
Query: 304 DGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVY 363
DG TY M+ +L ++ + A KL EM +P+ + L+ S G+A L+ +M V+
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 364 MEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKS 423
+MQ G +P Y +LI+ +AKAG LD A+ ++ M+ G P+ +++II K+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 424 GKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTY 483
G L A +F +M G P TY+ ++++HA + +A+KLY M +AG P TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 484 TALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGS 542
+ ++ +L ++ A + EM+ + D +L+ ++ K G+V+ A +W + M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 543 SGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQN 602
+G+R N L + ++ A LL+ + + L YT +L+ + + +
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Query: 603 ERHLMAILSATKHKAHAFLCGL-FTGP--EQRKQPVLSFVREFFHGIDYELEEGAARYFV 659
++++T H AH FL + GP E + +F+ + H D E + G V
Sbjct: 663 MGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFL-DLMHSEDRESKRG----LV 717
Query: 660 NVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVMHT 719
+ ++++L GQ A VW+VA + +FP A+ W +++ +S G A+ A+ T
Sbjct: 718 DAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINLHVMSEGTAVTALSRT 777
Query: 720 LHRFRKRMLYYGVVPRRIKLVTG----------PTLKIVIAQMLSSVESPF 760
L FRK+ML G P RI +VTG ++ + ++L+ SPF
Sbjct: 778 LAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLNIFGSPF 828
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 171/355 (48%), Gaps = 5/355 (1%)
Query: 135 VAKIVEVVNRWKWGPELETQLDKLQFVPKMVHITQALKVINDSDTSLSLFRWAKRQSWYV 194
V + V+ R++WGP E L L Q LK +ND +L F W KRQ +
Sbjct: 302 VENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFK 361
Query: 195 PGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSK-NGISLFSAYNRVIQYLAKADKLEM 253
Y + L ++ F + L DEMV D + N ++ YNR+I +A+ L
Sbjct: 362 HDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVT----YNRLIHSYGRANYLNE 417
Query: 254 SYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIP 313
+ F ++ ++ CK D +Y L+ + G A ++Y+ M+ G S D TY ++I
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 314 SLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRP 373
L K+G L AA KLF EM ++ P+ + ++D KA ++K+Y +MQ G P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 374 SAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIF 433
Y ++E G L+ A ++ EM+ + P+ ++ ++++ K+G ++ A +
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 434 TDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLT 488
M AG P T + LL ++ A +L +M + GLRP L TYT LL+
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
>sp|Q9SSF9|PP123_ARATH Pentatricopeptide repeat-containing protein At1g74750
OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1
Length = 855
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 222/442 (50%), Gaps = 7/442 (1%)
Query: 304 DGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVY 363
DG TY M+ +L ++ + KL EM +P+ + L+ S G+A L +M V+
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 364 MEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKS 423
+MQ G P Y +LI+ +AKAG LD A+ ++ M+ AG P+ +++II K+
Sbjct: 418 NQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA 477
Query: 424 GKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTY 483
G L A +F +M G P T++ ++ +HA + ++A+KLY M +AG +P TY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 484 TALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGS 542
+ ++ +L ++ A + EM+ + D +L+ ++ K G+VD A +W + M
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 543 SGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQN 602
+G+R N L + ++ A LL++ + L YT +L+ + +
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFD 657
Query: 603 ERHLMAILSATKHKAHAFLCGL-FTGPE-QRKQPVLSFVREFFHGIDYELEEGAARYFVN 660
+++ + H AH FL + GP+ Q+ + +S +F H D E + G ++
Sbjct: 658 MGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDRESKRG----LMD 713
Query: 661 VLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIAVMHTL 720
++++L G A VW+VA ++P A+ + W +++ +S G A+IA+ TL
Sbjct: 714 AVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIALSRTL 773
Query: 721 HRFRKRMLYYGVVPRRIKLVTG 742
FRK+ML G P RI +VTG
Sbjct: 774 AWFRKQMLVSGDCPSRIDIVTG 795
Score = 166 bits (420), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/448 (27%), Positives = 203/448 (45%), Gaps = 20/448 (4%)
Query: 135 VAKIVEVVNRWKWGPELETQLDKLQFVPKMVHITQALKVINDSDTSLSLFRWAKRQSWYV 194
V + ++ R+KWG E L F Q LK +++ +L F W KRQ +
Sbjct: 297 VENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFK 356
Query: 195 PGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSK-NGISLFSAYNRVIQYLAKADKLEM 253
Y + L ++ F + L DEMV D K N ++ YNR+I +A+ L+
Sbjct: 357 HDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVT----YNRLIHSYGRANYLKE 412
Query: 254 SYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIP 313
+ F ++ ++ C+ D +Y L+ + G A ++Y+ M++ S D TY ++I
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 314 SLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRP 373
L K+G L AA +LF EM + P+ F ++ KA +T++K+Y +MQ G +P
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 374 SAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIF 433
Y ++E G L+ A ++ EM+ + P+ ++ ++++ K+G +D A +
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 434 TDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKR 493
M +AG P T + LL ++ A L SM + GL P L TYT LL+
Sbjct: 593 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTD- 651
Query: 494 KLVDVAAKILLEMKTMGYSVDVSASDVLMVYIK------DGSV--DHALRWLRFMGSSGI 545
A+ +M G + VS M +K DG DH +L FM S
Sbjct: 652 ------ARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVSNFLDFMHSEDR 705
Query: 546 RTNNFIVRQLFESCMKNALYESAKPLLE 573
+ ++ + + K+ L E A + E
Sbjct: 706 ESKRGLMDAVVDFLHKSGLKEEAGSVWE 733
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 138/596 (23%), Positives = 253/596 (42%), Gaps = 59/596 (9%)
Query: 126 KKPFL---NASAVAKIVEVVNRWKWGPELETQLDKLQFVPKMVHITQALKVINDSDTSLS 182
+KP+ N V I V+ WGP E L L F P+ + L+ + D + ++
Sbjct: 24 EKPYTFEGNRQTVNDICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVNRAIE 83
Query: 183 LFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMV------------------ 224
FRW +R++ E Y L V+ R+FD + + EM
Sbjct: 84 YFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGC 143
Query: 225 --HDSSKNGISL------------FSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDT 270
+ + G + FSAY +I + + +M F+++ + +
Sbjct: 144 VKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTV 203
Query: 271 QSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQE 330
+ L+ F +G A + + M+ D Y + I S K G++D A K F E
Sbjct: 204 HLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE 263
Query: 331 MKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGK 390
++ +P + S++ + KA RLD +++++ ++ P Y ++I Y AGK
Sbjct: 264 IEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGK 323
Query: 391 LDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSC 450
D A L + R G P+ + I+ K GK+D A+ +F +M++ P STY+
Sbjct: 324 FDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNI 382
Query: 451 LLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMG 510
L++M +G++D+A +L +SM AGL P + T ++ L K + +D A + EM
Sbjct: 383 LIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKV 442
Query: 511 YSVD-VSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAK 569
+ D ++ ++ K G VD A + M S RTN+ + L ++ + E
Sbjct: 443 CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGH 502
Query: 570 PLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNERHLMAILSATKHKAHAFLCGLFTGPE 629
+ + + DL L + + + + + + R + + KA F+ P+
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI-----KARRFV------PD 551
Query: 630 QRKQPVL--SFVREFFHGIDYEL-----EEGA---ARYFVNVLLNYLVLMGQINRA 675
R +L ++ F YEL E+G R + N++++ G++N+A
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY-NIVIDGFCKCGKVNKA 606
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 210/468 (44%), Gaps = 13/468 (2%)
Query: 136 AKIVEVVNRWKWGPELETQLDKLQFVPKMVHITQALKVI---NDSDTSLSLFRWAKRQSW 192
K+ +V WK+ E+E K P V T + V+ N D ++ +F ++
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLK----PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR- 303
Query: 193 YVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLE 252
VP Y + + FD SL + +K I AYN ++ L K K++
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLE---RQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 253 MSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMI 312
+ F++ + D + +YN+L+ + G AFE+ +SM+K + T +M+
Sbjct: 361 EALKVFEE-MKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 313 PSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHR 372
L KS +LD A +F+EM + P F SL+D +GK GR+D + KVY +M R
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 373 PSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSI 432
++ +Y SLI+++ G+ + +++ +M P+ L ++ K+G+ + ++
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM 539
Query: 433 FTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAK 492
F +++ F+P +YS L+ +G + +L+ SM G Y ++ K
Sbjct: 540 FEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCK 599
Query: 493 RKLVDVAAKILLEMKTMGYS-VDVSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFI 551
V+ A ++L EMKT G+ V+ V+ K +D A S I N I
Sbjct: 600 CGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 552 VRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQD 599
L + K + A +LE ++ +L + S+L LV+ ++
Sbjct: 660 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 160/333 (48%), Gaps = 6/333 (1%)
Query: 178 DTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHD-SSKNGISLFS 236
DT+ L R + +++ P ++ D L +S+ D ++F+EM + + + I+ S
Sbjct: 394 DTAFEL-RDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
+I L K +++ +Y ++K+LDSDC+ ++ Y L+ F N G +IY+ M
Sbjct: 453 ----LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDM 508
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
CS D + + K+G + +F+E+K R F P ++ L+ + KAG
Sbjct: 509 INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFA 568
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+ + +++ M+ G Y +I+ + K GK++ A +L +EM+ GF P + +
Sbjct: 569 NETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSV 628
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
I+ AK +LD A +F + + YS L++ G++D A + + GL
Sbjct: 629 IDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL 688
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTM 509
P L T+ +LL L K + ++ A MK +
Sbjct: 689 TPNLYTWNSLLDALVKAEEINEALVCFQSMKEL 721
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 170/368 (46%), Gaps = 5/368 (1%)
Query: 202 MLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKV 261
++ + N R DG ++ +M++ + + L + Y + + KA + E F+++
Sbjct: 488 LIKNFFNHGRKEDGH-KIYKDMINQNCSPDLQLLNTY---MDCMFKAGEPEKGRAMFEEI 543
Query: 262 LDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRL 321
D +SY++L+ + G + +E++ SM++ C LD Y ++I K G++
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 322 DAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSL 381
+ A +L +EMK + F P+ + S++D + K RLD + ++ E + + +Y SL
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSL 663
Query: 382 IESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGF 441
I+ + K G++D A + +E+ G PN + ++++ K+ +++ A+ F M+
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 442 LPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAK 501
P TY L+ + + A + M G++P +YT +++ LAK + A
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 502 ILLEMKTMGYSVDVSASDVLMVYIKDGS-VDHALRWLRFMGSSGIRTNNFIVRQLFESCM 560
+ K G D + + ++ + +G+ A G+ +N L ++
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLH 843
Query: 561 KNALYESA 568
KN E A
Sbjct: 844 KNDCLEQA 851
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 35/309 (11%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
+Y+ +I L KA +Y F + + C +DT++YN+++ F G KA+++ E M
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
+ TY +I LAK RLD A LF+E K + + I++SL+D GK GR+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALR-------------------- 396
D + + E+ G P+ + SL+++ KA +++ AL
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 397 ---------------LWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGF 441
W EM+ G +P+ +T +I AK+G + A ++F + G
Sbjct: 734 INGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGG 793
Query: 442 LPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAK 501
+P + Y+ ++E ++ + A L+ GL T LL L K ++ AA
Sbjct: 794 VPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAI 853
Query: 502 ILLEMKTMG 510
+ ++ G
Sbjct: 854 VGAVLRETG 862
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 143/592 (24%), Positives = 259/592 (43%), Gaps = 34/592 (5%)
Query: 125 IKKPFLNASAVAK---------IVEVVNRWKWG-PELETQLDKLQFVPKMV-HITQALKV 173
I+ PF+ S + I +VV+ W P LE D L P V + LK
Sbjct: 62 IRYPFVTKSGTSTYSEDFDRDWIRKVVHNDLWDDPGLEKLFD-LTLAPIWVPRVLVELK- 119
Query: 174 INDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHD------- 226
D + F+W+ ++ + E Y ++ +L +R + S+ EMV
Sbjct: 120 -EDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVF 178
Query: 227 ----SSKN-GISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFL 281
S++N + F ++ + L LE + CF K+ T+S N L+ F
Sbjct: 179 DVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFA 238
Query: 282 NKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFN 341
G ++ M TY +MI + K G ++AA LF+EMK R P
Sbjct: 239 KLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTV 298
Query: 342 IFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEM 401
+ S++D GK GRLD ++ + EM+ P Y +LI + K GKL L + EM
Sbjct: 299 TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREM 358
Query: 402 RIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQV 461
+ G +PN ++ ++++ K G + A+ + DM R G +P TY+ L++ + G +
Sbjct: 359 KGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNL 418
Query: 462 DSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVL 521
A +L N M G+ + TYTAL+ L + + A ++ +M T G ++++ + L
Sbjct: 419 SDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL 478
Query: 522 M-VYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAA 580
+ ++K ++D AL L + GI+ + + E+AK ++ E
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 581 KVDLVLYTSVLAHLVRCQDEQNERHLMAILSATKHKAHAF-LCGLFTGPEQRKQPVLSFV 639
K + ++YT+++ + + HL+ + + C L G + K ++S
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK--LVSKA 596
Query: 640 REFFHGI--DYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFP 689
++F+ I D+ L+ AA + +++ L Q+ A +++ + L P
Sbjct: 597 VDYFNRISNDFGLQANAAIF--TAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 174/445 (39%), Gaps = 40/445 (8%)
Query: 200 YVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFK 259
Y ++ D + + D + LF+EM + + YN +I K +L+ + C F+
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEM---KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 260 KVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSG 319
++ D C+ D +YN L+ F G E Y M+ + +Y ++ + K G
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG 381
Query: 320 RLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKV----------------- 362
+ AIK + +M+ P+ + SL+D+ K G L + ++
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 363 ------------------YMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIA 404
+ +M G P+ Y +LI + KA +D AL L +E++
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 405 GFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSA 464
G +P+ L+ I K++ A + +M+ G Y+ L++ + SG
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 465 MKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKT-MGYSVDVSASDVLMV 523
+ L + M + + T+ L+ L K KLV A + G + + ++
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 621
Query: 524 YI-KDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKV 582
+ KD V+ A M G+ + L + K A L + E K+
Sbjct: 622 GLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKL 681
Query: 583 DLVLYTSVLAHLVRCQDEQNERHLM 607
DL+ YTS++ L C Q R +
Sbjct: 682 DLLAYTSLVWGLSHCNQLQKARSFL 706
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 121/275 (44%), Gaps = 4/275 (1%)
Query: 194 VPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEM 253
+P Y L ++++ D L L +E+ K + L+ + I L +K+E
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF---IWGLCSLEKIEA 525
Query: 254 SYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIP 313
+ ++ + K ++ Y LM + G P + + + M++ + + T+ ++I
Sbjct: 526 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 585
Query: 314 SLAKSGRLDAAIKLFQEM-KERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHR 372
L K+ + A+ F + + + + IF +++D + K +++ + ++ +M G
Sbjct: 586 GLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV 645
Query: 373 PSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSI 432
P Y SL++ K G + AL L D+M G + + +T ++ + +L A S
Sbjct: 646 PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSF 705
Query: 433 FTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKL 467
+M G P +L+ H G +D A++L
Sbjct: 706 LEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/499 (22%), Positives = 220/499 (44%), Gaps = 42/499 (8%)
Query: 137 KIVEVVNRWKWGPELETQLDKLQFVPKMVHITQALKVINDSDTSLSLFRWAKRQSWYVPG 196
+ + +V +KWGP+ E L+ L+ + L++ + + + F+WA ++ +
Sbjct: 66 RFIRIVKIFKWGPDAEKALEVLKLKVDHRLVRSILEIDVEINVKIQFFKWAGKRRNFQHD 125
Query: 197 DECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAY-NRVIQYLAKADKLEMSY 255
Y+ L L E+R + M E+V ++ +S+ A + +++ L +A + +
Sbjct: 126 CSTYMTLIRCLEEARLYGEMYRTIQEVVRNTY---VSVSPAVLSELVKALGRAKMVSKAL 182
Query: 256 CCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM-EKGECSLDGSTYELMIPS 314
F + CK + +YN ++ + + +G K E+Y M +G+C D TY +I S
Sbjct: 183 SVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISS 242
Query: 315 LAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPS 374
K GR D+AI+LF EMK+ +P+ I+ +L+ K G+++ ++ ++ EM+ G P+
Sbjct: 243 YEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPT 302
Query: 375 APMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFT 434
Y LI+ KAG++D A + +M G P+ ++ K G+++ ++F+
Sbjct: 303 VYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFS 362
Query: 435 DMERAGFLPT----------------------------------PS--TYSCLLEMHASS 458
+M PT PS TYS L++ + +
Sbjct: 363 EMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT 422
Query: 459 GQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSAS 518
+V+ A+ L M G P + Y +L+ L K K + A ++ E+K +V
Sbjct: 423 NRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVY 482
Query: 519 DVLMVYI-KDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVE 577
V++ + K G + A+ M + G + + L +K + A LL E
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542
Query: 578 SAAKVDLVLYTSVLAHLVR 596
+ + D+ + +L R
Sbjct: 543 NGCRADINSHNIILNGFAR 561
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 172/357 (48%), Gaps = 9/357 (2%)
Query: 178 DTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSA 237
+ +L LF KR P Y L L ++ D + +M+ D +
Sbjct: 285 EKALDLFEEMKRAGC-SPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFL-- 341
Query: 238 YNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYN-VLMTLFLNKGLPYKAFEIYESM 296
N ++ L K ++E F ++ C SYN V+ LF +K + ++ M
Sbjct: 342 -NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM 400
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
+ S TY ++I K+ R++ A+ L +EM E+ F P + SL++++GKA R
Sbjct: 401 KADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+ + +++ E++ S+ +Y +I+ + K GKL A+ L++EM+ G P+ + +
Sbjct: 461 EAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
+ K+G ++ A S+ ME G ++++ +L A +G A++++ ++ +G+
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGI 580
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDH 532
+P TY LL A + + AA+++ EMK G+ D ++ S +L G+VDH
Sbjct: 581 KPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV---GNVDH 634
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850, chloroplastic
OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 153 bits (386), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 179/363 (49%), Gaps = 5/363 (1%)
Query: 196 GDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSY 255
GD V + + + G +LF++ D YN +I L +AD +E++
Sbjct: 748 GDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQ--PKLPTYNLLIGGLLEADMIEIAQ 805
Query: 256 CCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSL 315
F +V + C D +YN L+ + G + FE+Y+ M EC + T+ ++I L
Sbjct: 806 DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL 865
Query: 316 AKSGRLDAAIKLFQE-MKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPS 374
K+G +D A+ L+ + M +R+F P+ + L+D + K+GRL + +++ M G RP+
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Query: 375 APMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFT 434
+Y LI + KAG+ D A L+ M G RP+ ++++++ G++D + F
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985
Query: 435 DMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSM-TSAGLRPGLSTYTALLTLLAKR 493
+++ +G P Y+ ++ S +++ A+ L+N M TS G+ P L TY +L+ L
Sbjct: 986 ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045
Query: 494 KLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGSSGIRTNNFIV 552
+V+ A KI E++ G +V + L+ Y G +HA + M + G N
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Query: 553 RQL 555
QL
Sbjct: 1106 EQL 1108
Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 139/605 (22%), Positives = 242/605 (40%), Gaps = 67/605 (11%)
Query: 193 YVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLE 252
+ P + Y L L + RD D ++ L EM K + F+ RV L +A K+
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV---LGRAGKIN 275
Query: 253 MSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMI 312
+Y K++ D C D +Y VL+ A E++E M+ G D TY ++
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLL 335
Query: 313 PSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAG------------------ 354
+ + LD+ + + EM++ P F LVD++ KAG
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL 395
Query: 355 -----------------RLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRL 397
RLD +++++ M+ G +P+A Y+ I+ Y K+G +AL
Sbjct: 396 PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 398 WDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHAS 457
+++M+ G PN + S AK+G+ A IF ++ G +P TY+ +++ ++
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 458 SGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSA 517
G++D A+KL + M G P + +L+ L K VD A K+ + MK M V
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 518 SDVLMVYI-KDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYV 576
+ L+ + K+G + A+ M G N LF+ KN A +L +
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 635
Query: 577 ESAAKVDLVLYTSVLAHLVRCQDEQNERHLMAILSATKHKAHAFLCGLFTGPEQRKQPVL 636
+ D+ Y +++ LV+ + + + LC L P K ++
Sbjct: 636 DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLL--PGVVKASLI 693
Query: 637 SFVREFFHGIDYELEEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQ 696
+ Y + A F L+ ++ I+ A V++ +L I D
Sbjct: 694 EDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNA-----VSFSERLVANGICRDG 748
Query: 697 H------IAWSLDVRNLSVGAALIAVMHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVIA 750
I +S N+S L +F K + GV P+ PT ++I
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTL------FEKFTKDL---GVQPKL------PTYNLLIG 793
Query: 751 QMLSS 755
+L +
Sbjct: 794 GLLEA 798
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 201/454 (44%), Gaps = 19/454 (4%)
Query: 157 KLQFVPKMVHITQALKVINDSDTSLSLFRWAK---------------RQSWYVPGDECYV 201
KL+ + + + Q + D++T L++F+ R+ +V Y
Sbjct: 133 KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192
Query: 202 MLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKV 261
L +L +SR + ++ M+ + + + +S+ ++ L K ++ K++
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSS---LMVGLGKRRDIDSVMGLLKEM 249
Query: 262 LDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRL 321
K + ++ + + + G +A+EI + M+ C D TY ++I +L + +L
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 322 DAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSL 381
D A ++F++MK +P + +L+D LD+ + + EM+ GH P + L
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 382 IESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGF 441
+++ KAG A D MR G PN + +I + +LD A+ +F +ME G
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 442 LPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAK 501
PT TY ++ + SG SA++ + M + G+ P + A L LAK A +
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 502 ILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCM 560
I +K +G D +++M Y K G +D A++ L M +G + +V L +
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 561 KNALYESAKPLLETYVESAAKVDLVLYTSVLAHL 594
K + A + E K +V Y ++LA L
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 142/310 (45%), Gaps = 3/310 (0%)
Query: 239 NRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSY-NVLMTLFLNKGLPYKAFEIYESME 297
N +++ L KLE F + K DT +Y + +L + GL + + + E
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 298 KGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLD 357
G L+ +Y +I L KS A+++++ M FRPS ++SL+ +GK +D
Sbjct: 182 FGFV-LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDID 240
Query: 358 TSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMII 417
+ M + EM+ G +P+ + I +AGK++ A + M G P+ +T++I
Sbjct: 241 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 418 ESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLR 477
++ + KLD A +F M+ P TY LL+ + + +DS + ++ M G
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV 360
Query: 478 PGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMV-YIKDGSVDHALRW 536
P + T+T L+ L K A L M+ G ++ + L+ ++ +D AL
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 537 LRFMGSSGIR 546
M S G++
Sbjct: 421 FGNMESLGVK 430
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 3/143 (2%)
Query: 167 ITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHD 226
+ L ++ D L F+ K +S P CY ++ + L +S + L LF+EM
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELK-ESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM--K 1023
Query: 227 SSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLP 286
+S+ YN +I L A +E + + ++ + + + ++N L+ + G P
Sbjct: 1024 TSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKP 1083
Query: 287 YKAFEIYESMEKGECSLDGSTYE 309
A+ +Y++M G S + TYE
Sbjct: 1084 EHAYAVYQTMVTGGFSPNTGTYE 1106
>sp|Q8L844|PP413_ARATH Pentatricopeptide repeat-containing protein At5g42310,
mitochondrial OS=Arabidopsis thaliana GN=At5g42310 PE=2
SV=1
Length = 709
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 176/362 (48%), Gaps = 1/362 (0%)
Query: 241 VIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGE 300
+I LA + + + F+++ S K T++YN L+ ++ G A + MEK
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 301 CSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSM 360
S D TY L+I + +GR ++A + +EM+ + +P+ +F+ L+ G +
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 361 KVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESH 420
+V EM+ G +P Y +I+++ K LD A+ +D M G P+ + +I+ H
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 421 AKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGL 480
K G+ +A +F MER G LP +TY+ ++ + + D +L M S G+ P +
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 481 STYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRF 539
T+T L+ + K + A + L EMK++G + + L+ Y + G + A+ R
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 540 MGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQD 599
M S G++ + + L + ++ A +L+ E+ K D+V YT+++ L+R
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Query: 600 EQ 601
Q
Sbjct: 670 FQ 671
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 147/335 (43%), Gaps = 5/335 (1%)
Query: 189 RQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFS-AYNRVIQYLAK 247
RQS P Y L ++ G L + MV + K G+S Y+ +I
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKT----GPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVN 386
Query: 248 ADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGST 307
A + E + K++ D + ++ ++ L+ F ++G K F++ + M+ D
Sbjct: 387 AGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446
Query: 308 YELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQ 367
Y ++I + K LD A+ F M P + +L+D K GR + +++ M+
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 368 GCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLD 427
G P A Y +I SY + D RL +M+ G PN T +++ + KSG+ +
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 428 IAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALL 487
A+ +M+ G P+ + Y+ L+ +A G + A+ + MTS GL+P L +L+
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 488 TLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM 522
+ + A +L MK G DV LM
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 661
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 114/241 (47%)
Query: 238 YNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESME 297
YN VI K + L+ + F ++L + D ++N L+ G A E++E+ME
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 298 KGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLD 357
+ C +TY +MI S R D +L +MK + P+ +LVD GK+GR +
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 358 TSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMII 417
+++ EM+ G +PS+ MY +LI +YA+ G + A+ + M G +P+ +I
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 418 ESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLR 477
+ + + A ++ M+ G P TY+ L++ + +Y M +G +
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCK 686
Query: 478 P 478
P
Sbjct: 687 P 687
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 157/339 (46%), Gaps = 8/339 (2%)
Query: 238 YNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESME 297
Y+ +I L +++KL Y F +L + +YN L+ KA + M
Sbjct: 170 YSILIHALGRSEKL---YEAF--LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMR 224
Query: 298 KGECSLDGSTYELMIPSLAKSGRLDAA--IKLFQEMKERNFRPSFNIFASLVDSMGKAGR 355
+ D Y L+I SL +S ++D+ ++L++E++ + ++ K+G
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 356 LDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTM 415
++++ Q G VS+I + A +G+ A L++E+R +G +P +
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 416 IIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAG 475
+++ + K+G L A S+ ++ME+ G P TYS L++ + ++G+ +SA + M +
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 476 LRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHAL 534
++P ++ LL R ++L EMK++G D +V++ + K +DHA+
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAM 464
Query: 535 RWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLE 573
M S GI + L + K+ + A+ + E
Sbjct: 465 TTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFE 503
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/597 (22%), Positives = 259/597 (43%), Gaps = 65/597 (10%)
Query: 238 YNRVIQYLAKAD-KLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
YN VI K + + F ++ + + D ++N L+ + GL A +++ M
Sbjct: 306 YNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM 365
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
D +Y ++ ++ K G++D A ++ +M + P+ +++++D KAGR
Sbjct: 366 TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRF 425
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
D ++ ++ EM+ G Y +L+ Y K G+ + AL + EM G + + + +
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
+ + K GK D +FT+M+R LP TYS L++ ++ G AM+++ SAGL
Sbjct: 486 LGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL 545
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDHALR 535
R + Y+AL+ L K LV A ++ EM G S + V+ + ++ + + ++D +
Sbjct: 546 RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Query: 536 W-----LRFMG---SSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAA------- 580
+ L F S+ T V QLF + + K E E +
Sbjct: 606 YSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRK 665
Query: 581 ------KVDLVLYTSVLAHLVRCQDEQNERHLMAILSATKHKAHAFLCGLFTGPEQRKQP 634
K ++V ++++L RC ++ L+ L +K + + GL G +++
Sbjct: 666 MHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMG---QREN 722
Query: 635 VLSFVREFFHGIDYELEEGAARYFVNVLLNYLVLMGQI---------NRARCVWKVAYEN 685
V + F ++ E++ A F N L + L GQ R+R VW+ + +
Sbjct: 723 VWLQAQSLFDKVN-EMDGSTASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSD 781
Query: 686 KLFPKAIVFDQHIAWSLDVRNLSVGAALIAVMHTLHRFRKRMLYYG-VVPRRIKLVTG-- 742
LD+ +S GAA V L R ++Y G +P+ + ++TG
Sbjct: 782 SC--------------LDLHLMSSGAARAMVHAWLLNIRS-IVYEGHELPKVLSILTGWG 826
Query: 743 --------PTLKIVIAQMLSSVESPFEVSKVVL---RAPGDSVMEWFKKPIVQQFLL 788
L+ + +L +++PF +SK + + G V W ++ + L+
Sbjct: 827 KHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNMGRFTSSGSVVATWLRESATLKLLI 883
Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 162/358 (45%), Gaps = 2/358 (0%)
Query: 241 VIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGE 300
+I L + K+ ++ F+ +++ L++ + GL +A ++ SM++
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 301 CSLDGSTYELMIPSLAKSG-RLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTS 359
+ TY +I + K G K F EM+ +P F SL+ + G + +
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 360 MKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIES 419
++ EM Y +L+++ K G++D A + +M + PN ++ +I+
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG 418
Query: 420 HAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPG 479
AK+G+ D A+++F +M G +Y+ LL ++ G+ + A+ + M S G++
Sbjct: 419 FAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKD 478
Query: 480 LSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDHALRWLR 538
+ TY ALL K+ D K+ EMK + ++ S ++ Y K G A+ R
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 539 FMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVR 596
S+G+R + + L ++ KN L SA L++ + ++V Y S++ R
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 132/292 (45%), Gaps = 21/292 (7%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
+Y+ VI AKA + + + F ++ +D SYN L++++ G +A +I M
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
D TY ++ K G+ D K+F EMK + P+ +++L+D K G
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+M+++ E + G R +Y +LI++ K G + +A+ L DEM G PN + I
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 417 IESHAKSGKLD---------------IAMSIFTDMERA------GFLPTPSTYSCLLEMH 455
I++ +S +D A+S T+ E G L T S +
Sbjct: 591 IDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCE 650
Query: 456 ASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMK 507
++ ++++ M ++P + T++A+L ++ + A+ +L E++
Sbjct: 651 EGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 6/302 (1%)
Query: 295 SMEKGECSLDGSTYELMIPSLAKSGRLDAAIKL--FQEMKERNFRPSFNIFASLVDSMGK 352
S E C D TY +I L D A+ F +ER + ++++ ++G+
Sbjct: 188 SFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGR 245
Query: 353 AGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGL 412
G++ + +++ G+ + + +LI +Y ++G + A+ +++ M+ G RPN
Sbjct: 246 YGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVT 305
Query: 413 FTMIIESHAKSG-KLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSM 471
+ +I++ K G + F +M+R G P T++ LL + + G ++A L++ M
Sbjct: 306 YNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM 365
Query: 472 TSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSV 530
T+ + + +Y LL + K +D+A +IL +M + VS S V+ + K G
Sbjct: 366 TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRF 425
Query: 531 DHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSV 590
D AL M GI + L K E A +L K D+V Y ++
Sbjct: 426 DEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL 485
Query: 591 LA 592
L
Sbjct: 486 LG 487
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 155/692 (22%), Positives = 270/692 (39%), Gaps = 99/692 (14%)
Query: 142 VNRWKWGPELETQLDKLQFVPKMVHITQALKVI-------------------NDSDTSLS 182
V + K+ ++E+ ++KL +P I + L + D SL
Sbjct: 67 VEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLR 126
Query: 183 LFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVI 242
LF++ +RQ W P + Y ++ +L D L +FDEM S S+FS Y +I
Sbjct: 127 LFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM--PSQGVSRSVFS-YTALI 183
Query: 243 QYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAF-EIYESMEKGEC 301
+ + E S ++ + +YN ++ GL ++ ++ M
Sbjct: 184 NAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGI 243
Query: 302 SLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMK 361
D TY ++ + A G D A +F+ M + P ++ LV++ GK RL+
Sbjct: 244 QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCD 303
Query: 362 VYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHA 421
+ EM G P Y L+E+YAK+G + A+ ++ +M+ AG PN +++++
Sbjct: 304 LLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 422 KSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLS 481
+SG+ D +F +M+ + P +TY+ L+E+ G + L++ M + P +
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 482 TYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSA-SDVLMVYIKDGSVDHALRWLRFM 540
TY ++ K L + A KIL M A + V+ + + + AL M
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 541 GSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVES------------------AAKV 582
G + L S + L + ++ +L V+S K
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF 543
Query: 583 DLVLYTSVLAHLVRCQDEQNERHLMAILSA--------------TKHKAHAFL------C 622
+ + T V RC + +ER L A+LS + KA L C
Sbjct: 544 EEAVKTYVDMEKSRC--DPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYC 601
Query: 623 GLFT--GPEQRKQPVLSFVREFFHG-------------------------IDYELEE--- 652
+ G +R V + E ++Y L++
Sbjct: 602 MMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNS 661
Query: 653 ---GAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSV 709
G F N LL+ L +GQ RA V A + LFP+ + + WS+DV +S
Sbjct: 662 EGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPE-LFRKNKLVWSVDVHRMSE 720
Query: 710 GAALIAVMHTLHRFRKRMLYYGVVPRRIKLVT 741
G A+ L+ ML G +P+ +V+
Sbjct: 721 GGMYTALSVWLNDIND-MLLKGDLPQLAVVVS 751
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 172/355 (48%), Gaps = 17/355 (4%)
Query: 236 SAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYES 295
S Y++V+ YL A K+E+++ F+++ D +Y +++ F GL +A + +
Sbjct: 484 STYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNE 543
Query: 296 MEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGR 355
M + C+ + TY +I + K+ ++ A +LF+ M P+ +++L+D KAG+
Sbjct: 544 MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQ 603
Query: 356 LDTSMKVYMEMQGC----------------GHRPSAPMYVSLIESYAKAGKLDTALRLWD 399
++ + +++ M G RP+ Y +L++ + K+ +++ A +L D
Sbjct: 604 VEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLD 663
Query: 400 EMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSG 459
M + G PN ++ +I+ K GKLD A + T+M GF T TYS L++ +
Sbjct: 664 AMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 460 QVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSAS 518
+ D A K+ + M P + YT ++ L K D A K++ M+ G + V+ +
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 519 DVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLE 573
++ + G ++ L L MGS G+ N R L + C KN + A LLE
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 174/408 (42%), Gaps = 23/408 (5%)
Query: 119 HVMVGGIKKPFLNASAVAKIVEVVNRWKWGPELETQLDKLQFVPKMVHITQALK-VINDS 177
++ G+ +N S+ + + +++ + ++ F+P ++ L + N S
Sbjct: 438 EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNAS 497
Query: 178 DTSLS--LFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLF 235
L+ LF KR V Y ++ D ++ + F+EM + +
Sbjct: 498 KMELAFLLFEEMKRGGL-VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 236 SAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYES 295
+A +I KA K+ + F+ +L C + +Y+ L+ G KA +I+E
Sbjct: 557 TA---LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 296 MEKGECSLDGS----------------TYELMIPSLAKSGRLDAAIKLFQEMKERNFRPS 339
M + D TY ++ KS R++ A KL M P+
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 340 FNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWD 399
++ +L+D + K G+LD + +V EM G + Y SLI+ Y K + D A ++
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 400 EMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSG 459
+M PN ++T +I+ K GK D A + ME G P TY+ +++ G
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793
Query: 460 QVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMK 507
++++ ++L M S G+ P TY L+ K +DVA +L EMK
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 142/313 (45%), Gaps = 17/313 (5%)
Query: 315 LAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPS 374
L +G+ + A + +EM + F P + ++ +++ + A +++ + ++ EM+ G
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 375 APMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFT 434
Y +++S+ KAG ++ A + ++EMR G PN +T +I ++ K+ K+ A +F
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 435 DMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSA----------------GLRP 478
M G LP TYS L++ H +GQV+ A +++ M + RP
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 479 GLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYI-KDGSVDHALRWL 537
+ TY ALL K V+ A K+L M G + D L+ + K G +D A
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 538 RFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRC 597
M G + L + K + A +L +E++ ++V+YT ++ L +
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 598 QDEQNERHLMAIL 610
LM ++
Sbjct: 758 GKTDEAYKLMQMM 770
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 138/548 (25%), Positives = 211/548 (38%), Gaps = 88/548 (16%)
Query: 119 HVMVGGIKKPFLNASAVAKIVEVVNRWKWGPELETQLDKLQFVPKMVH--ITQALKVIND 176
H +V I + ++A A+A V V+ +G + + L QF K+ + + L++I
Sbjct: 88 HQVVPIITQSSIDARAIADAVSGVDDV-FGRKSQKFLR--QFREKLSESLVIEVLRLIAR 144
Query: 177 SDTSLSLFRWAKRQSWYVPGDECYVMLFDV-------------LNESRDFDGML--SLFD 221
+S F WA RQ Y Y L D+ L + RD D + +
Sbjct: 145 PSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLN 204
Query: 222 EMVHDSSKNG---ISL--------------FSAYNRVIQYLAKADKL--------EMSYC 256
+V +NG I+L S YN +IQ KAD+L EMS
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 257 ----------CFKKVLDSDCKI-----------------DTQSYNVLMTLFLNKGLPYKA 289
CF L CK+ DT Y L++ L +A
Sbjct: 265 NLRMDGFTLRCFAYSL---CKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 290 FEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDS 349
+ M C + TY ++ +L ++ M PS IF SLV +
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 350 MGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYA------KAGKLDTALRLWDEMRI 403
+G + K+ +M CGH P +Y LI S LD A + + EM
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441
Query: 404 AGF---RPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQ 460
AG + N FT + S +GK + A S+ +M GF+P STYS +L ++ +
Sbjct: 442 AGVVLNKINVSSFTRCLCS---AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Query: 461 VDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDV 520
++ A L+ M GL + TYT ++ K L++ A K EM+ +G + +V
Sbjct: 499 MELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTA 558
Query: 521 LM-VYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESA 579
L+ Y+K V +A M S G N L + K E A + E S
Sbjct: 559 LIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSK 618
Query: 580 AKVDLVLY 587
D+ +Y
Sbjct: 619 DVPDVDMY 626
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 118/250 (47%), Gaps = 35/250 (14%)
Query: 289 AFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVD 348
A ++ M + C+ + Y MI L K G+ D A KL Q M+E+ +P+ + +++D
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 349 SMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMR------ 402
G G+++T +++ M G P+ Y LI+ K G LD A L +EM+
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 403 -IAGFR--------------------------PNFGLFTMIIESHAKSGKLDIAMSIFTD 435
AG+R P ++ ++I++ K+ +L++A+ + +
Sbjct: 848 HTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907
Query: 436 ME--RAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKR 493
+ A + STY+ L+E + +V++A +L++ MT G+ P + ++ +L+ L +
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRN 967
Query: 494 KLVDVAAKIL 503
+ A +L
Sbjct: 968 SKISEALLLL 977
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
Query: 306 STYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSF----NIFASLVDSMGKAGRLDTSMK 361
S Y L+I +L K+ RL+ A++L +E+ F + + + SL++S+ A +++T+ +
Sbjct: 883 SVYRLLIDNLIKAQRLEMALRLLEEVA--TFSATLVDYSSTYNSLIESLCLANKVETAFQ 940
Query: 362 VYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWD 399
++ EM G P + SLI+ + K+ AL L D
Sbjct: 941 LFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 175/404 (43%), Gaps = 78/404 (19%)
Query: 178 DTSLSLFRWAKRQSWY--VPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISL- 234
D +L F W +Q Y + + ++ +L + +G +S M + ++G SL
Sbjct: 152 DLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGK----EGRVSSAANMFNGLQEDGFSLD 207
Query: 235 FSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPY------- 287
+Y +I A + + + FKK+ + CK +YNV++ +F G P+
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 288 -----------------------------KAFEIYESMEKGECSLDGSTYELMIPSLAKS 318
+A +++E M+ S D TY ++ KS
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 319 GRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMY 378
R A+K+ EM F PS + SL+ + + G LD +M++ +M G +P Y
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 379 VSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIF----- 433
+L+ + +AGK+++A+ +++EMR AG +PN F I+ + GK M IF
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 434 ------------------------------TDMERAGFLPTPSTYSCLLEMHASSGQVDS 463
+M+RAGF+P T++ L+ ++ G +
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 464 AMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMK 507
AM +Y M AG+ P LSTY +L LA+ + + + K+L EM+
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 187/441 (42%), Gaps = 5/441 (1%)
Query: 211 RDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDT 270
+ FD L FD + + S +I L K ++ + F + + +D
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 208
Query: 271 QSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGR-LDAAIKLFQ 329
SY L++ F N G +A +++ ME+ C TY +++ K G + L +
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268
Query: 330 EMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAG 389
+MK P + +L+ + + +V+ EM+ G Y +L++ Y K+
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328
Query: 390 KLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYS 449
+ A+++ +EM + GF P+ + +I ++A+ G LD AM + M G P TY+
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 450 CLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTM 509
LL +G+V+SAM ++ M +AG +P + T+ A + + R KI E+
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448
Query: 510 GYSVD-VSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESA 568
G S D V+ + +L V+ ++G + M +G L + + +E A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 569 KPLLETYVESAAKVDLVLYTSVLAHLVRCQD-EQNERHLMAILSATKHKAHAFLCGLFTG 627
+ +++ DL Y +VLA L R EQ+E+ L + C L
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Query: 628 PEQRKQPVL--SFVREFFHGI 646
K+ L S E + G+
Sbjct: 569 YANGKEIGLMHSLAEEVYSGV 589
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 154/361 (42%), Gaps = 36/361 (9%)
Query: 272 SYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEM 331
+YN L++ + G+ +A E+ M + D TY ++ ++G++++A+ +F+EM
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 332 KERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKL 391
+ +P+ F + + G G+ MK++ E+ CG P + +L+ + + G
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMD 470
Query: 392 DTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCL 451
++ EM+ AGF P F +I ++++ G + AM+++ M AG P STY+ +
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 452 LEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRK----------------- 494
L A G + + K+ M +P TY +LL A K
Sbjct: 531 LAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI 590
Query: 495 ------------------LVDVAAKILLEMKTMGYSVDVSA-SDVLMVYIKDGSVDHALR 535
L+ A + E+K G+S D++ + ++ +Y + V A
Sbjct: 591 EPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANG 650
Query: 536 WLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLV 595
L +M G + L ++A + ++ +L + K D++ Y +V+
Sbjct: 651 VLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYC 710
Query: 596 R 596
R
Sbjct: 711 R 711
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/410 (19%), Positives = 168/410 (40%), Gaps = 39/410 (9%)
Query: 200 YVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFK 259
Y L + + +S+F+EM + K I F+A+ I+ K F
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF---IKMYGNRGKFTEMMKIFD 443
Query: 260 KVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSG 319
++ D ++N L+ +F G+ + +++ M++ + T+ +I + ++ G
Sbjct: 444 EINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCG 503
Query: 320 RLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYV 379
+ A+ +++ M + P + + +++ ++ + G + S KV EM+ +P+ Y
Sbjct: 504 SFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYC 563
Query: 380 SLIESYA-----------------------------------KAGKLDTALRLWDEMRIA 404
SL+ +YA K L A R + E++
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 405 GFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSA 464
GF P+ ++ + + + A + M+ GF P+ +TY+ L+ MH+ S +
Sbjct: 624 GFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKS 683
Query: 465 MKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-V 523
++ + + G++P + +Y ++ + + A++I EM+ G DV + +
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 524 YIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLE 573
Y D + A+ +R+M G R N + + K + AK +E
Sbjct: 744 YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVE 793
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 158/352 (44%), Gaps = 18/352 (5%)
Query: 162 PKMVHITQALKVI--NDSDTSLS-LFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLS 218
P +V L V N D+ +S +F+ KR + +VP E + L + F+ ++
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR-AGFVPERETFNTLISAYSRCGSFEQAMT 510
Query: 219 LFDEMVHDSSKNGISL-FSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLM 277
++ M+ G++ S YN V+ LA+ E S ++ D CK + +Y L+
Sbjct: 511 VYRRML----DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 278 TLFLNK---GLPYK-AFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKE 333
+ N GL + A E+Y + + L + ++ +K L A + F E+KE
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVL----LKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 334 RNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDT 393
R F P S+V G+ + + V M+ G PS Y SL+ ++++
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 394 ALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLE 453
+ + E+ G +P+ + +I ++ ++ ++ A IF++M +G +P TY+ +
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIG 742
Query: 454 MHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLE 505
+A+ + A+ + M G RP +TY +++ K D AK+ +E
Sbjct: 743 SYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKD-EAKLFVE 793
>sp|Q8GWE0|PP314_ARATH Pentatricopeptide repeat-containing protein At4g16390,
chloroplastic OS=Arabidopsis thaliana GN=P67 PE=1 SV=3
Length = 702
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/496 (22%), Positives = 223/496 (44%), Gaps = 43/496 (8%)
Query: 238 YNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESME 297
YN ++ K+ LE S F ++L+ K D ++ +++ G+P +A E +E M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 298 KGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLD 357
C D T MI + ++G +D A+ L+ + +R F++L+ G +G D
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYD 297
Query: 358 TSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMII 417
+ +Y EM+ G +P+ +Y LI+S +A + A ++ ++ GF PN+ + ++
Sbjct: 298 GCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALV 357
Query: 418 ESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSA-GL 476
++ ++ D A++I+ +M+ G T Y+ LL M A + VD A +++ M +
Sbjct: 358 RAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETC 417
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSA-SDVLMVYIKDGSVDHALR 535
P T+++L+T+ A V A LL+M+ G+ + + V+ Y K VD +R
Sbjct: 418 DPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVR 477
Query: 536 WLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLV 595
+ GI ++ F C+ N + ++ + + K L V+ LV
Sbjct: 478 TFDQVLELGITPDD-----RFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKL-GQVVKMLV 531
Query: 596 RCQDEQNERHLMAILSATKHKAHAFLCGLFTGPEQRKQPVLSFVREFFHGIDYELEEGAA 655
+EQN G+F +K+ E I ++++
Sbjct: 532 ---EEQNCEE-----------------GVF-----KKE-----ASELIDSIGSDVKKA-- 559
Query: 656 RYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIA 715
++N L++ V + ++ RA + ++ E ++ + WSL +++LS+GAAL A
Sbjct: 560 --YLNCLIDLCVNLNKLERACEILQLGLEYDIY-TGLQSKSATQWSLHLKSLSLGAALTA 616
Query: 716 VMHTLHRFRKRMLYYG 731
+ ++ + L G
Sbjct: 617 LHVWMNDLSEAALESG 632
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 127/292 (43%), Gaps = 40/292 (13%)
Query: 164 MVHITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEM 223
M + A + D +LSL+ A+ + W + + L + S ++DG L++++EM
Sbjct: 248 MAAMIDAYGRAGNVDMALSLYDRARTEKWRIDA-VTFSTLIRIYGVSGNYDGCLNIYEEM 306
Query: 224 VHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNK 283
K + + YNR+I + +A +
Sbjct: 307 KALGVKPNLVI---YNRLIDSMGRAKR--------------------------------- 330
Query: 284 GLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIF 343
P++A IY+ + + + STY ++ + ++ D A+ +++EMKE+ + ++
Sbjct: 331 --PWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILY 388
Query: 344 ASLVDSMGKAGRLDTSMKVYMEMQGCGH-RPSAPMYVSLIESYAKAGKLDTALRLWDEMR 402
+L+ +D + +++ +M+ C P + + SLI YA +G++ A +MR
Sbjct: 389 NTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMR 448
Query: 403 IAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEM 454
AGF P + T +I+ + K+ ++D + F + G P CLL +
Sbjct: 449 EAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNV 500
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%)
Query: 377 MYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDM 436
+Y ++ + K+ L+ + +L+DEM G +P+ FT II ++G A+ F M
Sbjct: 177 LYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM 236
Query: 437 ERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLV 496
G P T + +++ + +G VD A+ LY+ + R T++ L+ +
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 497 DVAAKILLEMKTMG 510
D I EMK +G
Sbjct: 297 DGCLNIYEEMKALG 310
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 175/379 (46%), Gaps = 5/379 (1%)
Query: 212 DFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQ 271
+ D L+LFD+M +K + YN +I K K++ + + + + +
Sbjct: 220 NIDVALTLFDKM---ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLI 276
Query: 272 SYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEM 331
SYNV++ +G + + M + SLD TY +I K G A+ + EM
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 332 KERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKL 391
PS + SL+ SM KAG ++ +M+ +M+ G P+ Y +L++ +++ G +
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 392 DTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCL 451
+ A R+ EM GF P+ + +I H +GK++ A+++ DM+ G P +YS +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 452 LEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGY 511
L S VD A+++ M G++P TY++L+ +++ A + EM +G
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 512 SVD-VSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKP 570
D + + ++ Y +G ++ AL+ M G+ + L K + AK
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 571 -LLETYVESAAKVDLVLYT 588
LL+ + E + D+ +T
Sbjct: 577 LLLKLFYEESVPSDVTYHT 595
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 191/430 (44%), Gaps = 17/430 (3%)
Query: 170 ALKVINDSDTSLSLFRWAKRQSWYVPGDECYVM--LFDVLNESRDFDGMLSLFDE---MV 224
A K ++D SL + Q Y D CY +FD++ +S LSL D+ +V
Sbjct: 107 AAKTLDDEYASLV---FKSLQETY---DLCYSTSSVFDLVVKSY---SRLSLIDKALSIV 157
Query: 225 HDSSKNG-ISLFSAYNRVIQYLAKADK-LEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLN 282
H + +G + +YN V+ ++ + + + FK++L+S + +YN+L+ F
Sbjct: 158 HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCF 217
Query: 283 KGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNI 342
G A +++ ME C + TY +I K ++D KL + M + P+
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLIS 277
Query: 343 FASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMR 402
+ +++ + + GR+ V EM G+ Y +LI+ Y K G AL + EM
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 403 IAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVD 462
G P+ +T +I S K+G ++ AM M G P TY+ L++ + G ++
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 463 SAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVL 521
A ++ M G P + TY AL+ ++ A +L +MK G S D VS S VL
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 522 MVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAK 581
+ + VD ALR R M GI+ + L + + + A L E +
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 582 VDLVLYTSVL 591
D YT+++
Sbjct: 518 PDEFTYTALI 527
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 139/363 (38%), Gaps = 51/363 (14%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
Y ++ ++ + +Y +++ D+ +YN L+ G A + E M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
++ S D +Y ++ +S +D A+++ +EM E+ +P ++SL+ + R
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+ +Y EM G P Y +LI +Y G L+ AL+L +EM G P+ ++++
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 417 IESHAKS--------------------------------------------------GKL 426
I K G +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 427 DIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTAL 486
A +F M P + Y+ ++ H +G + A LY M +G T AL
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681
Query: 487 LTLLAKR-KLVDVAAKILLEMKTMGYSVDVSASDVLMVYIKDGSVDHALRWLRFMGSSGI 545
+ L K K+ ++ + I+ +++ S A ++ + ++G++D L L M G
Sbjct: 682 VKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741
Query: 546 RTN 548
N
Sbjct: 742 LPN 744
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 19/288 (6%)
Query: 210 SRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKID 269
S D D L + EMV K +S+ +IQ + + + + ++++L D
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSS---LIQGFCEQRRTKEACDLYEEMLRVGLPPD 519
Query: 270 TQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAA----I 325
+Y L+ + +G KA +++ M + D TY ++I L K R A +
Sbjct: 520 EFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLL 579
Query: 326 KLFQE-----------MKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPS 374
KLF E + E F SL+ G + + +V+ M G H+P
Sbjct: 580 KLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Query: 375 APMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFT 434
Y +I + +AG + A L+ EM +GF + ++++ K GK++ S+
Sbjct: 640 GTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIV 699
Query: 435 DMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRP-GLS 481
+ R+ L L+E++ G +D + + M G P G+S
Sbjct: 700 HVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 19/232 (8%)
Query: 194 VPGDE-CYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADK-- 250
+P DE Y L + D + L L +EMV K + Y+ +I L K +
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVE---KGVLPDVVTYSVLINGLNKQSRTR 572
Query: 251 ------LEMSY-------CCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESME 297
L++ Y + ++++ I+ +S L+ F KG+ +A +++ESM
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632
Query: 298 KGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLD 357
DG+ Y +MI ++G + A L++EM + F +LV ++ K G+++
Sbjct: 633 GKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN 692
Query: 358 TSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPN 409
V + + A L+E + G +D L + EM GF PN
Sbjct: 693 ELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 197/420 (46%), Gaps = 13/420 (3%)
Query: 184 FRWAKRQSWY---VPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNR 240
F KR +Y + C ++ +L E+R D + ++ EM+ + + F N
Sbjct: 173 FEAFKRSGYYGYKLSALSCKPLMIALLKENRSAD-VEYVYKEMIRRKIQPNVFTF---NV 228
Query: 241 VIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFL---NKGLPYKAFEIYESME 297
VI L K K+ + + + C + SYN L+ + G YKA + + M
Sbjct: 229 VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV 288
Query: 298 KGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLD 357
+ + S + +T+ ++I K L ++K+F+EM +++ +P+ + SL++ + G++
Sbjct: 289 ENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKIS 348
Query: 358 TSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMII 417
++ + +M G +P+ Y +LI + K L AL ++ ++ G P ++ M+I
Sbjct: 349 EAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLI 408
Query: 418 ESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLR 477
+++ K GK+D ++ +MER G +P TY+CL+ +G +++A KL++ +TS GL
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL- 467
Query: 478 PGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMV-YIKDGSVDHALRW 536
P L T+ L+ ++ AA +L EM MG +++M Y K+G++ A
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNM 527
Query: 537 LRFMGSS-GIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLV 595
M +R N L + + E A LL +E + + Y V +V
Sbjct: 528 RTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMV 587
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 176/426 (41%), Gaps = 28/426 (6%)
Query: 176 DSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGI-SL 234
D D L + W + S E L L ++ + + S D V + S + + S+
Sbjct: 80 DPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSI 139
Query: 235 FSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYE 294
F A +S C D+ C +++ ++L+ + N FE ++
Sbjct: 140 FHA---------------ISMC------DNVC-VNSIIADMLVLAYANNSRFELGFEAFK 177
Query: 295 SMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAG 354
L + + ++ +L K R +++EM R +P+ F +++++ K G
Sbjct: 178 RSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTG 237
Query: 355 RLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAK---AGKLDTALRLWDEMRIAGFRPNFG 411
+++ + V +M+ G P+ Y +LI+ Y K GK+ A + EM PN
Sbjct: 238 KMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLT 297
Query: 412 LFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSM 471
F ++I+ K L +M +F +M P +Y+ L+ + G++ A+ + + M
Sbjct: 298 TFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKM 357
Query: 472 TSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSV 530
SAG++P L TY AL+ K ++ A + +K G ++L+ Y K G +
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 531 DHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSV 590
D M GI + L +N E+AK L + + S DLV + +
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ-LTSKGLPDLVTFHIL 476
Query: 591 LAHLVR 596
+ R
Sbjct: 477 MEGYCR 482
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 3/240 (1%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
YN +I K D L+ + F V T+ YN+L+ + G F + E M
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
E+ D TY +I L ++G ++AA KLF ++ + P F L++ + G
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGES 486
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEM-RIAGFRPNFGLFTM 415
+ + EM G +P Y +++ Y K G L A + +M + R N + +
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546
Query: 416 IIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQV-DSAMKLYNSMTSA 474
+++ +++ GKL+ A + +M G +P TY + E G V D L+N T +
Sbjct: 547 LLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 177/393 (45%), Gaps = 4/393 (1%)
Query: 201 VMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKK 260
++L + +E+R + L L M D +Y VI K + +Y + +
Sbjct: 163 ILLKGLCDENRSQEA-LELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHE 221
Query: 261 VLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGR 320
+LD D +YN ++ KA E+ +M K D TY ++ SG+
Sbjct: 222 MLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 281
Query: 321 LDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVS 380
AI ++M+ P ++ L+D + K GR + K++ M G +P Y +
Sbjct: 282 PKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGT 341
Query: 381 LIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAG 440
L++ YA G L L D M G P+ +F+++I ++AK GK+D AM +F+ M + G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401
Query: 441 FLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAA 500
P TY ++ + SG+V+ AM + M GL PG Y +L+ L + A
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAE 461
Query: 501 KILLEMKTMGYSVD-VSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFES- 558
+++LEM G ++ + + ++ + K+G V + + M G++ N L
Sbjct: 462 ELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGY 521
Query: 559 CMKNALYESAKPLLETYVESAAKVDLVLYTSVL 591
C+ + E+ K LL V K + V Y++++
Sbjct: 522 CLAGKMDEAMK-LLSGMVSVGLKPNTVTYSTLI 553
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 173/382 (45%), Gaps = 4/382 (1%)
Query: 216 MLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNV 275
M L D MV + +FS +I AK K++ + F K+ + +Y
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSI---LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411
Query: 276 LMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERN 335
++ + G A +E M S Y +I L + + A +L EM +R
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471
Query: 336 FRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTAL 395
+ F S++DS K GR+ S K++ M G +P+ Y +LI Y AGK+D A+
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531
Query: 396 RLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMH 455
+L M G +PN ++ +I + K +++ A+ +F +ME +G P TY+ +L+
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591
Query: 456 ASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDV 515
+ + +A +LY +T +G + LSTY +L L K KL D A ++ + M ++
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651
Query: 516 SASDVLM-VYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLET 574
++++ +K G D A S+G+ N + R + E+ + L E L +
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 711
Query: 575 YVESAAKVDLVLYTSVLAHLVR 596
++ VD + ++ L++
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQ 733
Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 140/286 (48%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
Y+ ++ YL K + + F + K + +Y L+ + KG + + + M
Sbjct: 303 TYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLM 362
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
+ D + ++I + AK G++D A+ +F +M+++ P+ + +++ + K+GR+
Sbjct: 363 VRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRV 422
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+ +M + +M G P +Y SLI K + A L EM G N F I
Sbjct: 423 EDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSI 482
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
I+SH K G++ + +F M R G P TY+ L+ + +G++D AMKL + M S GL
Sbjct: 483 IDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGL 542
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM 522
+P TY+ L+ K ++ A + EM++ G S D+ ++++
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 132/354 (37%), Gaps = 43/354 (12%)
Query: 286 PYKAFEIYESMEKG---ECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNI 342
P A Y M + E + D TY ++I ++GRLD + ++ FR
Sbjct: 65 PAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIA 124
Query: 343 FASLVDSMGKAGRLDTSMKVYM-------------------------------------- 364
F L+ + R +M + +
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMM 184
Query: 365 -EMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKS 423
+ +G G P Y ++I + K G D A + EM G P+ + II + K+
Sbjct: 185 ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA 244
Query: 424 GKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTY 483
+D AM + M + G +P TY+ +L + SSGQ A+ M S G+ P + TY
Sbjct: 245 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 484 TALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSA-SDVLMVYIKDGSVDHALRWLRFMGS 542
+ L+ L K A KI M G +++ +L Y G++ L M
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 543 SGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVR 596
+GI ++++ L + K + A + + + V Y +V+ L +
Sbjct: 365 NGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCK 418
Score = 63.2 bits (152), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/384 (19%), Positives = 148/384 (38%), Gaps = 38/384 (9%)
Query: 189 RQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKA 248
RQ P Y + +L +S + + F++M+ + G + YN +I L
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV---YNSLIHGLCTC 454
Query: 249 DK-----------LEMSYCC----FKKVLDSDCK----IDTQ----------------SY 273
+K L+ C F ++DS CK I+++ +Y
Sbjct: 455 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITY 514
Query: 274 NVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKE 333
N L+ + G +A ++ M + TY +I K R++ A+ LF+EM+
Sbjct: 515 NTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMES 574
Query: 334 RNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDT 393
P + ++ + + R + ++Y+ + G + Y ++ K D
Sbjct: 575 SGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDD 634
Query: 394 ALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLE 453
AL+++ + + + F ++I++ K G+ D A +F G +P TY + E
Sbjct: 635 ALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAE 694
Query: 454 MHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSV 513
G ++ +L+ SM G ++ L +R + A L + +S+
Sbjct: 695 NIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSL 754
Query: 514 DVSASDVLMVYIKDGSVDHALRWL 537
+ S + + + + G R+L
Sbjct: 755 EASTASLFIDLLSGGKYQEYYRFL 778
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 129 bits (325), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 201/444 (45%), Gaps = 44/444 (9%)
Query: 193 YVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLE 252
+VPG C+ L + S F+ S F+E + SK + ++S + +I+ +A ++E
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNE---NKSKVVLDVYS-FGILIKGCCEAGEIE 180
Query: 253 MSY---------------CCFKKVLDSDCK--------------------IDTQSYNVLM 277
S+ + ++D CK + ++Y VL+
Sbjct: 181 KSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI 240
Query: 278 TLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFR 337
G+ + FE+YE M++ + TY ++ L K GR A ++F EM+ER
Sbjct: 241 NGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVS 300
Query: 338 PSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRL 397
+ + +L+ + + +L+ + KV +M+ G P+ Y +LI+ + GKL AL L
Sbjct: 301 CNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360
Query: 398 WDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHAS 457
+++ G P+ + +++ + G A + +ME G P+ TY+ L++ A
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420
Query: 458 SGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYS-VDVS 516
S ++ A++L SM GL P + TY+ L+ + ++ A+++ M +V
Sbjct: 421 SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVI 480
Query: 517 ASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYV 576
+ +++ Y K+GS AL+ L+ M + N R + E K + A+ L+E +
Sbjct: 481 YNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Query: 577 ESAAKVDLVLYTSVLAHLVRCQDE 600
+S TS+L+ + R +++
Sbjct: 541 DSGIDPS----TSILSLISRAKND 560
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 139/328 (42%), Gaps = 43/328 (13%)
Query: 308 YELMIPSLAKSGRLDAAIKLFQEMKERNFRP----------------SFN---------- 341
YE++I S +S L+ +I F EM + F P SFN
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 342 --------IFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDT 393
F L+ +AG ++ S + +E+ G P+ +Y +LI+ K G+++
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 394 ALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLE 453
A L+ EM G N +T++I K+G ++ M+ G P TY+C++
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 454 MHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSV 513
G+ A ++++ M G+ + TY L+ L + ++ A K++ +MK+ G +
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 514 DVSASDVLM-VYIKDGSVDHALRWLRFMGSSGIR----TNNFIVRQLFESCMKNALYESA 568
++ + L+ + G + AL R + S G+ T N +V C K +A
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF---CRKGDTSGAA 393
Query: 569 KPLLETYVESAAKVDLVLYTSVLAHLVR 596
K +++ E K V YT ++ R
Sbjct: 394 K-MVKEMEERGIKPSKVTYTILIDTFAR 420
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 90/221 (40%), Gaps = 2/221 (0%)
Query: 377 MYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDM 436
+Y +I SY ++ L+ ++ ++EM GF P F ++ S + S F +
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 437 ERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLV 496
+ L S + L++ +G+++ + L +T G P + YT L+ K+ +
Sbjct: 156 KSKVVLDVYS-FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 497 DVAAKILLEMKTMGYSVDVSASDVLMVYI-KDGSVDHALRWLRFMGSSGIRTNNFIVRQL 555
+ A + EM +G + VL+ + K+G M G+ N + +
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 556 FESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVR 596
K+ + A + + E ++V Y +++ L R
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 162/343 (47%), Gaps = 15/343 (4%)
Query: 281 LNKGLPYKA-FEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPS 339
LNK Y+A ++ +E S D ++ +I + RL A+ +M + F PS
Sbjct: 92 LNK---YEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPS 148
Query: 340 FNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWD 399
F SLV+ R +M + ++ G G+ P+ +Y ++I+S + G+++TAL +
Sbjct: 149 IVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLK 208
Query: 400 EMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSG 459
M+ G RP+ + +I SG ++ I +DM R G P T+S L++++ G
Sbjct: 209 HMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEG 268
Query: 460 QVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSAS 518
Q+ A K YN M + P + TY +L+ L L+D A K+L + + G+ + V+ +
Sbjct: 269 QLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYN 328
Query: 519 DVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVES 578
++ Y K VD ++ L M G+ + F L++ + + +A+ +L V
Sbjct: 329 TLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSC 388
Query: 579 AAKVDL----VLYTSVLAH------LVRCQDEQNERHLMAILS 611
D+ +L + H LVR +D Q + ++ I++
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIIT 431
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 141/309 (45%), Gaps = 5/309 (1%)
Query: 306 STYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVY-- 363
S Y + S S + + A+ LF +M E + PS F+ L+ ++ K + + + ++
Sbjct: 45 SDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRH 104
Query: 364 MEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKS 423
+EM G H + + +LI+ + + +L AL +M GF P+ F ++
Sbjct: 105 LEMLGISHDLYS--FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV 162
Query: 424 GKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTY 483
+ AMS+ + G+ P Y+ +++ GQV++A+ + M G+RP + TY
Sbjct: 163 NRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTY 222
Query: 484 TALLTLLAKRKLVDVAAKILLEMKTMGYSVDV-SASDVLMVYIKDGSVDHALRWLRFMGS 542
+L+T L V+A+IL +M MG S DV + S ++ VY K+G + A + M
Sbjct: 223 NSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQ 282
Query: 543 SGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQN 602
+ N L + L + AK +L V + V Y +++ + + +
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 603 ERHLMAILS 611
++ ++S
Sbjct: 343 GMKILCVMS 351
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%)
Query: 273 YNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMK 332
YN ++ KG A ++ + M+K D TY +I L SG + ++ +M
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 333 ERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLD 392
P F++L+D GK G+L + K Y EM P+ Y SLI G LD
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Query: 393 TALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLL 452
A ++ + + GF PN + +I + K+ ++D M I M R G TY+ L
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 453 EMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALL 487
+ + +G+ +A K+ M S G+ P + T+ LL
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILL 401
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 136/310 (43%), Gaps = 3/310 (0%)
Query: 217 LSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVL 276
+SL D++V + + + YN +I L + ++ + K + + D +YN L
Sbjct: 169 MSLVDQIVGLGYEPNVVI---YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225
Query: 277 MTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNF 336
+T + G + I M + S D T+ +I K G+L A K + EM +R+
Sbjct: 226 ITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Query: 337 RPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALR 396
P+ + SL++ + G LD + KV + G P+A Y +LI Y KA ++D ++
Sbjct: 286 NPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMK 345
Query: 397 LWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHA 456
+ M G + + + + + ++GK A + M G P T++ LL+
Sbjct: 346 ILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLC 405
Query: 457 SSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVS 516
G++ A+ + + G+ TY ++ L K V+ A + + G S DV
Sbjct: 406 DHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVI 465
Query: 517 ASDVLMVYIK 526
+M+ ++
Sbjct: 466 TYITMMIGLR 475
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 133/304 (43%), Gaps = 5/304 (1%)
Query: 193 YVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISL-FSAYNRVIQYLAKADKL 251
Y P Y + D L E + L + M K GI YN +I L +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHM----KKMGIRPDVVTYNSLITRLFHSGTW 235
Query: 252 EMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELM 311
+S ++ D +++ L+ ++ +G +A + Y M + + + TY +
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295
Query: 312 IPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGH 371
I L G LD A K+ + + F P+ + +L++ KA R+D MK+ M G
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355
Query: 372 RPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMS 431
Y +L + Y +AGK A ++ M G P+ F ++++ GK+ A+
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 432 IFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLA 491
D++++ + TY+ +++ + +V+ A L+ S+ G+ P + TY ++ L
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475
Query: 492 KRKL 495
+++L
Sbjct: 476 RKRL 479
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/367 (17%), Positives = 132/367 (35%), Gaps = 79/367 (21%)
Query: 355 RLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFT 414
+ + ++ ++ +M PS + L+ + AK K + + L+ + + G + FT
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 415 MIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSA 474
+I+ + +L +A+S M + GF P+ T+ L+ + AM L + +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 475 GLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIKDGSVDHAL 534
G P + Y ++ L ++ G V+ AL
Sbjct: 179 GYEPNVVIYNTIIDSLCEK----------------------------------GQVNTAL 204
Query: 535 RWLRFMGSSGIR----TNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSV 590
L+ M GIR T N ++ +LF S + + +L + D++ ++++
Sbjct: 205 DVLKHMKKMGIRPDVVTYNSLITRLFHS----GTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 591 LAHLVRCQDEQNERHLMAILSATKHKAHAFLCGLFTGPEQRKQPVLSFVREFFHGIDYEL 650
+ G E + +L +++ I +
Sbjct: 261 ID--------------------------------VYGKEGQ---LLEAKKQYNEMIQRSV 285
Query: 651 EEGAARYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVG 710
Y N L+N L + G ++ A+ V V FP A+ ++ I + + G
Sbjct: 286 NPNIVTY--NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDG 343
Query: 711 AALIAVM 717
++ VM
Sbjct: 344 MKILCVM 350
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 218/489 (44%), Gaps = 31/489 (6%)
Query: 135 VAKIVEVVNRWKWGPELETQLDKLQFVPKMVHITQALKV-------------INDSDTSL 181
V++IVE++ + + + L ++ K QAL V I +T L
Sbjct: 62 VSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLL 121
Query: 182 SLF----RWAKRQSWYV--------PGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSK 229
+ F +W K +S + P + Y +L + + ++F+ D M + K
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFK 181
Query: 230 NGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKA 289
+ FS Y+ VI LAKA KL+ + F ++ + D YN+L+ FL + A
Sbjct: 182 PDV--FS-YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTA 238
Query: 290 FEIYESM-EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVD 348
E+++ + E + T+ +MI L+K GR+D +K+++ MK+ ++SL+
Sbjct: 239 MELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIH 298
Query: 349 SMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRP 408
+ AG +D + V+ E+ Y +++ + + GK+ +L LW M
Sbjct: 299 GLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SV 357
Query: 409 NFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLY 468
N + ++I+ ++GK+D A I+ M G+ +TY + +G V+ A+ +
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 469 NSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMV-YIKD 527
+ S+G + Y +++ L K+K ++ A+ ++ EM G ++ + L+ I+D
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 528 GSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLY 587
+ A +LR MG +G R L K + A ++ +E+ K DL Y
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 588 TSVLAHLVR 596
+ +L L R
Sbjct: 538 SILLCGLCR 546
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/537 (20%), Positives = 221/537 (41%), Gaps = 29/537 (5%)
Query: 166 HITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVH 225
H+ + LK + + +LF A R Y Y + L+E+R + + + + +
Sbjct: 12 HVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRS 71
Query: 226 DSSK--NGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDS-DCKIDTQSYNVLMTLFLN 282
K ++L VI+ K + + FK++ + C+ +SYN L+ F+
Sbjct: 72 QECKCDEDVAL-----SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126
Query: 283 KGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNI 342
K ++ E + + TY ++I K + A M + F+P
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFS 186
Query: 343 FASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDE-M 401
++++++ + KAG+LD +++++ EM G P Y LI+ + K TA+ LWD +
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 402 RIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQV 461
+ PN ++I +K G++D + I+ M++ TYS L+ +G V
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNV 306
Query: 462 DSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKI--LLEMKTMGYSVDVSASD 519
D A ++N + + TY +L + + + ++ ++E K SV++ + +
Sbjct: 307 DKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN---SVNIVSYN 363
Query: 520 VLMV-YIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVES 578
+L+ +++G +D A R M + G + N A +++ S
Sbjct: 364 ILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESS 423
Query: 579 AAKVDLVLYTSVLAHLVRCQDEQNERHLMAILSATKHKAHAFLCGLFTGP---EQRKQPV 635
+D+ Y S++ L + + + +L+ +S + ++ +C G + R
Sbjct: 424 GGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEA 483
Query: 636 LSFVREFFHGIDYELEEGAARYFV---NVLLNYLVLMGQINRARCVWKVAYENKLFP 689
F+R E+ + R V N+L+ L G+ A K EN P
Sbjct: 484 SFFLR--------EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532
Score = 89.7 bits (221), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 157/348 (45%), Gaps = 5/348 (1%)
Query: 200 YVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFK 259
Y L L ++ + D S+F+E+ D K I + + YN ++ + K++ S ++
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNEL--DERKASIDVVT-YNTMLGGFCRCGKIKESLELWR 349
Query: 260 KVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSG 319
+++ ++ SYN+L+ L G +A I+ M + D +TY + I L +G
Sbjct: 350 -IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408
Query: 320 RLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYV 379
++ A+ + QE++ +AS++D + K RL+ + + EM G ++ +
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 380 SLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERA 439
+LI + +L A EM G RP + ++I K+GK A + +M
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN 528
Query: 440 GFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVA 499
G+ P TYS LL ++D A++L++ +GL + + L+ L +D A
Sbjct: 529 GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 500 AKILLEMKTMGYSVDVSASDVLMV-YIKDGSVDHALRWLRFMGSSGIR 546
++ M+ + ++ + LM + K G + A +M G++
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 111/264 (42%)
Query: 259 KKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKS 318
++V S +D +Y ++ K +A + + M K L+ +I L +
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 319 GRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMY 378
RL A +EM + RP+ + L+ + KAG+ + EM G +P Y
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 379 VSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMER 438
L+ + K+D AL LW + +G + + ++I GKLD AM++ +ME
Sbjct: 538 SILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEH 597
Query: 439 AGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDV 498
TY+ L+E G + A ++ M GL+P + +Y ++ L + V
Sbjct: 598 RNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSY 657
Query: 499 AAKILLEMKTMGYSVDVSASDVLM 522
A + + + G V ++L+
Sbjct: 658 AMEFFDDARNHGIFPTVYTWNILV 681
Score = 76.6 bits (187), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 110/257 (42%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
AY +I L K +LE + K++ ++++ N L+ + +A M
Sbjct: 431 AYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
K C +Y ++I L K+G+ A +EM E ++P ++ L+ + + ++
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
D +++++ + G M+ LI GKLD A+ + M N + +
Sbjct: 551 DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
+E K G + A I+ M + G P +Y+ +++ V AM+ ++ + G+
Sbjct: 611 MEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Query: 477 RPGLSTYTALLTLLAKR 493
P + T+ L+ + R
Sbjct: 671 FPTVYTWNILVRAVVNR 687
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/455 (25%), Positives = 199/455 (43%), Gaps = 27/455 (5%)
Query: 149 PELETQLDKLQFVPKMVHITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLN 208
PE+ T L + K H A+++ ND + R Y+ Y + L
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFND------MVSVGIRPDVYI-----YTGVIRSLC 238
Query: 209 ESRDFDGMLSLFDEMVHDSSKNGISL-FSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCK 267
E +D LS EM+ G + YN +I L K K+ + K + D K
Sbjct: 239 ELKD----LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLK 294
Query: 268 IDTQSYNVLMTLFLNKGL-PYKAFEI-YESMEKGEC---SLDGSTYELMIPSLAKSGRLD 322
D +Y L+ GL + FEI E M++ C S + ++ L K G+++
Sbjct: 295 PDVVTYCTLVY-----GLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 323 AAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLI 382
A+ L + + + P+ ++ +L+DS+ K + + ++ M G RP+ Y LI
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 383 ESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFL 442
+ + + GKLDTAL EM G + + + +I H K G + A +M
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 443 PTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKI 502
PT TY+ L+ + S G+++ A++LY+ MT G+ P + T+T LL+ L + L+ A K+
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 503 LLEMKTMGYSVDVSASDVLMV-YIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMK 561
EM + +V++ Y ++G + A +L+ M GI + + R L
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 562 NALYESAKPLLETYVESAAKVDLVLYTSVLAHLVR 596
AK ++ + +++ + YT +L R
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 154/365 (42%), Gaps = 9/365 (2%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
YN +I L K K + F ++ + + +Y++L+ +F +G A M
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
L Y +I K G + AA EM + P+ + SL+ G++
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+ ++++Y EM G G PS + +L+ +AG + A++L++EM +PN + ++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
IE + + G + A +M G +P +Y L+ +GQ A + +
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIKDGSVDHALRW 536
YT LL + ++ A + EM G +D+ VL+ DGS+ H R
Sbjct: 609 ELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI----DGSLKHKDRK 664
Query: 537 LRF-----MGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVL 591
L F M G++ ++ I + ++ K ++ A + + + + V YT+V+
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 592 AHLVR 596
L +
Sbjct: 725 NGLCK 729
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 156/347 (44%), Gaps = 10/347 (2%)
Query: 217 LSLFDEMVHDSSK-NGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNV 275
+ LF+EM + K N ++ YN +I+ + + ++ K++ + DT SY
Sbjct: 527 VKLFNEMAEWNVKPNRVT----YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 276 LMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERN 335
L+ G +A + + KG C L+ Y ++ + G+L+ A+ + QEM +R
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 336 FRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTAL 395
+ L+D K + EM G +P +Y S+I++ +K G A
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 396 RLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMH 455
+WD M G PN +T +I K+G ++ A + + M+ +P TY C L++
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDI- 761
Query: 456 ASSGQVD--SAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSV 513
+ G+VD A++L+N++ GL +TY L+ ++ ++ A++++ M G S
Sbjct: 762 LTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 514 D-VSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESC 559
D ++ + ++ + V A+ M GIR + L C
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 98/218 (44%), Gaps = 9/218 (4%)
Query: 195 PGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSS-KNGISLFSAYNRVIQYLAKADKLEM 253
P D Y + D +++ DF ++D M+++ N ++ Y VI L KA +
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT----YTAVINGLCKAGFVNE 735
Query: 254 SYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLP--YKAFEIYESMEKGECSLDGSTYELM 311
+ K+ + +Y + + L KG KA E++ ++ KG + + +TY ++
Sbjct: 736 AEVLCSKMQPVSSVPNQVTYGCFLDI-LTKGEVDMQKAVELHNAILKGLLA-NTATYNML 793
Query: 312 IPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGH 371
I + GR++ A +L M P + ++++ + + + +++++ M G
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Query: 372 RPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPN 409
RP Y +LI AG++ A L +EM G PN
Sbjct: 854 RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 106/285 (37%), Gaps = 40/285 (14%)
Query: 199 CYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISL-FSAYNRVIQYLAKADKLEMSYCC 257
CY L + LS+ EMV + G+ L Y +I K ++ +
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMV----QRGVDLDLVCYGVLIDGSLKHKDRKLFFGL 669
Query: 258 FKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAK 317
K++ D K D Y ++ G +AF I++ M C + TY +I L K
Sbjct: 670 LKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCK 729
Query: 318 SGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKA------------------------ 353
+G ++ A L +M+ + P+ + +D + K
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTAT 789
Query: 354 -----------GRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMR 402
GR++ + ++ M G G P Y ++I + + A+ LW+ M
Sbjct: 790 YNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMT 849
Query: 403 IAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPST 447
G RP+ + +I +G++ A + +M R G +P T
Sbjct: 850 EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 413 FTMIIESHAKSGKLDIAMSIFTDM-ERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSM 471
F ++I+ + +S ++ + +F M + LP T S LL AM+L+N M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 472 TSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM 522
S G+RP + YT ++ L + K + A +++ M+ G V++ +VL+
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 188/411 (45%), Gaps = 11/411 (2%)
Query: 138 IVEVVNRWKWGPELETQLDK------LQFVPKMVH-ITQALKVINDSDTSLSLFRWAKRQ 190
+ +++N +E+ LD ++ P V + ++ ++ D + S F W+++Q
Sbjct: 86 VSQILNLLDGSASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQ 145
Query: 191 SWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADK 250
Y ECYV L DVL ++D D + + E+ +S A N +I+ K
Sbjct: 146 KKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVS---AANALIKSFGKLGM 202
Query: 251 LEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYEL 310
+E ++K+ ++ + +YN LM ++ A ++E ME G D TY
Sbjct: 203 VEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNT 262
Query: 311 MIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCG 370
MI K+G+ A++ ++M+ R + +++ + + + +Y EM G
Sbjct: 263 MIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKG 322
Query: 371 HRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAM 430
+ + +I K GKL+ +++ M G +PN ++T++I+ +AKSG ++ A+
Sbjct: 323 IQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAI 382
Query: 431 SIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLL 490
+ M GF P TYS ++ +G+V+ A+ +++ GL Y++L+ L
Sbjct: 383 RLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGL 442
Query: 491 AKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFM 540
K VD A ++ EM G + D + L+ + K VD A+ + M
Sbjct: 443 GKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRM 493
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 150/307 (48%), Gaps = 6/307 (1%)
Query: 267 KIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIK 326
++ ++++++ +G + + ++E+M + + + Y ++I AKSG ++ AI+
Sbjct: 324 QVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383
Query: 327 LFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYA 386
L M + F+P ++ +V+ + K GR++ ++ + + G ++ Y SLI+
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 443
Query: 387 KAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERA-GFLPTP 445
KAG++D A RL++EM G + + +I++ K K+D A+++F ME G T
Sbjct: 444 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTV 503
Query: 446 STYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLE 505
TY+ LL + + A+KL++ M G+ P + + AL T L V A KIL E
Sbjct: 504 YTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDE 563
Query: 506 MKTMGYSVDVSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALY 565
+ MG +D + D++ K G + A + + GI V + M NAL
Sbjct: 564 LAPMGVILDAACEDMINTLCKAGRIKEACKL-----ADGITERGREVPGRIRTVMINALR 618
Query: 566 ESAKPLL 572
+ K L
Sbjct: 619 KVGKADL 625
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 165/365 (45%), Gaps = 11/365 (3%)
Query: 150 ELETQLDKLQFVPKMVHITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNE 209
++ET+ + + M I QA +D + ++L++ + VP +++ + E
Sbjct: 282 DMETRGHEADKITYMTMI-QACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKE 340
Query: 210 SRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKID 269
+ +G ++F+ M+ SK +++++ +I AK+ +E + +++D K D
Sbjct: 341 GKLNEG-YTVFENMIRKGSKPNVAIYTV---LIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 270 TQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQ 329
+Y+V++ G +A + + + +++ Y +I L K+GR+D A +LF+
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFE 456
Query: 330 EMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQ---GCGHRPSAPMYVSLIESYA 386
EM E+ + +L+D+ K ++D ++ ++ M+ GC + Y L+
Sbjct: 457 EMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQ--TVYTYTILLSGMF 514
Query: 387 KAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPS 446
K + + AL+LWD M G P F + SGK+ A I ++ G + +
Sbjct: 515 KEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAA 574
Query: 447 TYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEM 506
++ +G++ A KL + +T G T ++ L K D+A K++
Sbjct: 575 CED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSK 633
Query: 507 KTMGY 511
+GY
Sbjct: 634 IGIGY 638
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 165/413 (39%), Gaps = 24/413 (5%)
Query: 308 YELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQ 367
Y ++ LA + +D + E+K+ F + + +L+ S GK G ++ + V+ +M+
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 368 GCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLD 427
G P+ Y L+ A +D+A R+++ M +P+ + +I+ + K+G+
Sbjct: 215 ENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQ 274
Query: 428 IAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALL 487
AM DME G TY +++ + S + LY M G++ ++ ++
Sbjct: 275 KAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVI 334
Query: 488 TLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGSSGIR 546
L K ++ + M G +V+ VL+ Y K GSV+ A+R L M G +
Sbjct: 335 GGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFK 394
Query: 547 TNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNERHL 606
+ + KN E A T ++ + Y+S++ L + L
Sbjct: 395 PDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERL 454
Query: 607 MAILSATKHKAHAF----LCGLFTGPEQRKQPVLSFVREFFHGIDYELEEGAAR--YFVN 660
+S ++ L FT + + + F R E EEG + Y
Sbjct: 455 FEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKR-------MEEEEGCDQTVYTYT 507
Query: 661 VLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAAL 713
+LL+ + + A +W + + + P A F R LS G L
Sbjct: 508 ILLSGMFKEHRNEEALKLWDMMIDKGITPTAACF----------RALSTGLCL 550
Score = 37.4 bits (85), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Query: 480 LSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLR 538
L Y +L+ +LA K VD + E+K + + VSA++ L+ + K G V+ L R
Sbjct: 152 LECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWR 211
Query: 539 FMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQ 598
M +GI + L + +SA+ + E K D+V Y +++ +
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAG 271
Query: 599 DEQNERHLMAILSATKHKA 617
Q + + H+A
Sbjct: 272 QTQKAMEKLRDMETRGHEA 290
>sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110, chloroplastic
OS=Arabidopsis thaliana GN=EMB1270 PE=2 SV=2
Length = 1440
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 125/554 (22%), Positives = 239/554 (43%), Gaps = 47/554 (8%)
Query: 269 DTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLF 328
D +++N LM+ + G +A I+ +M + S + +++ +L GRL+ +
Sbjct: 786 DLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVV 845
Query: 329 QEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKA 388
+E+++ F+ S + ++D+ +AG + K+Y M+ G+ P+ +Y +IE K
Sbjct: 846 EELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKG 905
Query: 389 GKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTY 448
++ A + EM A F+ ++ +++ + + ++ ++ G P +TY
Sbjct: 906 KRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTY 965
Query: 449 SCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKT 508
+ L+ M+ + + L M + GL P L TY +L++ K+K ++ A ++ E+ +
Sbjct: 966 NTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLS 1025
Query: 509 MGYSVDVSASDVLMVYIKD-GSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYES 567
G +D S +M +D GS A + L+ M ++GI + L S + +
Sbjct: 1026 KGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQE 1085
Query: 568 AKPLLETYVESAAKVDLVLYTSVLAHLVRCQD----------------EQNER------- 604
A+ +L ++ ++ + Y+SV+ +R +D E + R
Sbjct: 1086 AEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVR 1145
Query: 605 ---------HLMAILSATKHKAHAFLCGLFTGPEQRKQPVLSFVREFFHGIDYELEEGAA 655
+M +L A + L G R + ++S V +F + +E+ AA
Sbjct: 1146 AASFSKEKIEVMLLLKALEDIGFDLPIRLLAG---RPELLVSEVDGWFEKLK-SIEDNAA 1201
Query: 656 RYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALIA 715
FVN LLN L A V+++ + +F + W D R LS GAAL+A
Sbjct: 1202 LNFVNALLNLLWAFELRATASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALVA 1261
Query: 716 VMHTLHRFRKRMLY-YGVVPRRIKLVTGP------TLKIVIAQMLSSVESPFEVSKV--- 765
+ L + L Y P+ + L+TG +L + L + SPF K
Sbjct: 1262 LTLWLDHMQDASLEGYPESPKSVVLITGTAEYNGISLDKTLKACLWEMGSPFLPCKTRTG 1321
Query: 766 VLRAPGDSVMEWFK 779
+L A S+ W K
Sbjct: 1322 LLVAKAHSLRMWLK 1335
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 205/463 (44%), Gaps = 25/463 (5%)
Query: 131 NASAVAKIVEVVNRWKW---GPELETQLDKLQFVPKMVHITQALKVINDSDTSLSLFRW- 186
NA VA I+ V+ RW E+ T+ + V V + A+ + S +
Sbjct: 190 NARMVAAILGVLGRWNQESLAVEIFTRAEPT--VGDRVQVYNAMMGVYSRSGKFSKAQEL 247
Query: 187 --AKRQSWYVPGDECYVMLFDVLNESRDFDGMLS------LFDEMVHDSSKNGISLFSAY 238
A RQ VP ++ F+ L +R G L+ L D MV +S ++ Y
Sbjct: 248 VDAMRQRGCVPD----LISFNTLINARLKSGGLTPNLAVELLD-MVRNSGLRPDAI--TY 300
Query: 239 NRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEK 298
N ++ ++ L+ + F+ + C+ D +YN +++++ GL +A ++ +E
Sbjct: 301 NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL 360
Query: 299 GECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDT 358
D TY ++ + A+ + +++Q+M++ F + +++ GK G+LD
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 359 SMKVYMEMQG-CGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMII 417
++++Y +M+G G P A Y LI+S KA + A L EM G +P ++ +I
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 418 ESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLR 477
+AK+GK + A F+ M R+G P YS +L++ + A LY M S G
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHT 540
Query: 478 PGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIKDGSVDHALRWL 537
P + Y ++ L K D K + +M+ + + S VL +K D A R L
Sbjct: 541 PSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVL---VKGECFDLAARQL 597
Query: 538 RFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAA 580
+ ++G N + + S + + A LLE E A+
Sbjct: 598 KVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHAS 640
Score = 109 bits (273), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 160/369 (43%), Gaps = 8/369 (2%)
Query: 180 SLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYN 239
+L +F W + W+ P + VL SL E+ + YN
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRW----NQESLAVEIFTRAEPTVGDRVQVYN 229
Query: 240 RVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKG--LPYKAFEIYESME 297
++ +++ K + + C D S+N L+ L G P A E+ + +
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 298 KGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLD 357
D TY ++ + ++ LD A+K+F++M+ +P + +++ G+ G
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA 349
Query: 358 TSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMII 417
+ +++ME++ G P A Y SL+ ++A+ + ++ +M+ GF + + II
Sbjct: 350 EAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII 409
Query: 418 ESHAKSGKLDIAMSIFTDMER-AGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
+ K G+LD+A+ ++ DM+ +G P TY+ L++ + + A L + M G+
Sbjct: 410 HMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGI 469
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALR 535
+P L TY+AL+ AK + A M G D A V++ V ++ A
Sbjct: 470 KPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWG 529
Query: 536 WLRFMGSSG 544
R M S G
Sbjct: 530 LYRDMISDG 538
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 108/230 (46%), Gaps = 1/230 (0%)
Query: 288 KAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFN-IFASL 346
+A +++ + C S + M+ K G + A ++ + + + F + + ++ +
Sbjct: 699 EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDI 758
Query: 347 VDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGF 406
+++ GK + V ++ G P + SL+ +YA+ G + A +++ M G
Sbjct: 759 IEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGP 818
Query: 407 RPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMK 466
P +++ + G+L+ + +++ GF + S+ +L+ A +G + K
Sbjct: 819 SPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKK 878
Query: 467 LYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVS 516
+Y+SM +AG P + Y ++ LL K K V A ++ EM+ + V+++
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELA 928
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 106/531 (19%), Positives = 199/531 (37%), Gaps = 116/531 (21%)
Query: 178 DTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSA 237
D +L L++ K S P Y +L D L ++ +L EM+ K + +SA
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSA 478
Query: 238 YNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYES-- 295
+I AKA K E + F +L S K D +Y+V++ + L KA+ +Y
Sbjct: 479 ---LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMI 535
Query: 296 ---------------------------------ME---------------KGEC------ 301
ME KGEC
Sbjct: 536 SDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAAR 595
Query: 302 ----------SLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMG 351
L+ T ++ S + SGR A +L + +KE I +L+
Sbjct: 596 QLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHC 655
Query: 352 KAGRLDTSM-------------------------------------KVYMEMQGCGHRPS 374
K L ++ +V+ +++ G S
Sbjct: 656 KVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEAS 715
Query: 375 APMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFG---LFTMIIESHAKSGKLDIAMS 431
+ S++ Y K G +TA ++ ++ GF +F ++T IIE++ K A S
Sbjct: 716 ESVCKSMVVVYCKLGFPETAHQVVNQAETKGF--HFACSPMYTDIIEAYGKQKLWQKAES 773
Query: 432 IFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLA 491
+ ++ ++G P T++ L+ +A G + A ++N+M G P + + LL L
Sbjct: 774 VVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALC 833
Query: 492 KRKLVDVAAKILLEMKTMGYSVDVSASDVLMV---YIKDGSVDHALRWLRFMGSSGIRTN 548
++ ++ E++ MG+ +S S +L++ + + G++ + M ++G
Sbjct: 834 VDGRLEELYVVVEELQDMGFK--ISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPT 891
Query: 549 NFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQD 599
+ R + E K A+ ++ E+ KV+L ++ S+L +D
Sbjct: 892 IRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIED 942
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 5/211 (2%)
Query: 236 SAYNRVIQYLAKADKLEMSYCCFKKV--LDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIY 293
+ YN +I + + E Y +++ L D K+DT Y L++ F + +A +++
Sbjct: 963 TTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT--YKSLISAFGKQKCLEQAEQLF 1020
Query: 294 ESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKA 353
E + LD S Y M+ SG A KL Q MK P+ L+ S +
Sbjct: 1021 EELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSS 1080
Query: 354 GRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLF 413
G + KV ++ + Y S+I++Y ++ ++ + EM+ G P+ ++
Sbjct: 1081 GNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIW 1140
Query: 414 TMIIESHAKSGKLDIAMSIFTDMERAGF-LP 443
T + + + S + M + +E GF LP
Sbjct: 1141 TCFVRAASFSKEKIEVMLLLKALEDIGFDLP 1171
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 125/597 (20%), Positives = 233/597 (39%), Gaps = 86/597 (14%)
Query: 179 TSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDF------------DGML---SLFDEM 223
TS+ LF W Q+ Y + Y +L L + +F +G++ SLF +
Sbjct: 93 TSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISI 152
Query: 224 VHDSSKNGIS------------------LFSAYNRVIQYLAKADKLEMSYCCFKKVLDSD 265
+ D K G F +YN V++ L + +++ F +L
Sbjct: 153 MRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK 212
Query: 266 CKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAI 325
++ V+M F A + M K C + Y+ +I SL+K R++ A+
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 326 KLFQEM-------------------------KE----------RNFRPSFNIFASLVDSM 350
+L +EM E R F P + L++ +
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 351 GKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIA-GFRPN 409
K GR+D + ++ + +P ++ +LI + G+LD A + +M + G P+
Sbjct: 333 CKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 410 FGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYN 469
+ +I + K G + +A+ + DM G P +Y+ L++ G++D A + N
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 470 SMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIKD-G 528
M++ GL+P + L++ K + A +I EM G DV + L+ + +
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 529 SVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYT 588
+ HAL LR M S G+ N L + ++ + A+ L+ V + +D + Y
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 589 SVLAHLVRCQDEQNERHLMAILSATKHKAHAFLCGLFTGPEQRK---QPVLSFVREFFHG 645
S++ L R + R L + H C + R + + F +E
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM--- 625
Query: 646 IDYELEEGAARYFV--NVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVFDQHIAW 700
+ G+ V N L+N L G+I +++ + P + F+ ++W
Sbjct: 626 ----VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 177/433 (40%), Gaps = 20/433 (4%)
Query: 149 PELETQLDKLQFVPKMVHITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLN 208
P+ ET D + + K I +A K++N R R + P D Y L + L
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVN---------RMLIRG--FAPDDITYGYLMNGLC 333
Query: 209 ESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKI 268
+ D LF + K I +F N +I +L+ + ++ S +
Sbjct: 334 KIGRVDAAKDLF----YRIPKPEIVIF---NTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 269 -DTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKL 327
D +YN L+ + +GL A E+ M C + +Y +++ K G++D A +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 328 FQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAK 387
EM +P+ F L+ + K R+ +++++ EM G +P + SLI +
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 388 AGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPST 447
++ AL L +M G N + +I + + G++ A + +M G T
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 448 YSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMK 507
Y+ L++ +G+VD A L+ M G P + L+ L + +V+ A + EM
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 508 TMGYSVDVSASDVLMVYI-KDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYE 566
G + D+ + L+ + + G ++ L R + + GI + L K
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 567 SAKPLLETYVESA 579
A LL+ +E
Sbjct: 687 DACLLLDEGIEDG 699
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 3/255 (1%)
Query: 321 LDAAIKLFQEMKERN-FRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYV 379
+ +++LF +N +R SF+++ L+ +G G T ++ ++M+ G +++
Sbjct: 91 VSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFI 150
Query: 380 SLIESYAKAGKLDTALRLWDEMR-IAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMER 438
S++ Y KAG RL EMR + P F + +++E +A ++F DM
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210
Query: 439 AGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDV 498
PT T+ +++ + ++DSA+ L MT G P Y L+ L+K V+
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270
Query: 499 AAKILLEMKTMGYSVDVSA-SDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFE 557
A ++L EM MG D +DV++ K ++ A + + M G ++ L
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 558 SCMKNALYESAKPLL 572
K ++AK L
Sbjct: 331 GLCKIGRVDAAKDLF 345
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 111/237 (46%), Gaps = 3/237 (1%)
Query: 217 LSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVL 276
+ +F EM K + F N +I L + D+++ + + ++ +T +YN L
Sbjct: 479 VEIFREMPRKGCKPDVYTF---NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 277 MTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNF 336
+ FL +G +A ++ M LD TY +I L ++G +D A LF++M
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 337 RPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALR 396
PS L++ + ++G ++ +++ EM G P + SLI +AG+++ L
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 397 LWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLE 453
++ +++ G P+ F ++ K G + A + + GF+P T+S LL+
Sbjct: 656 MFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 126/303 (41%), Gaps = 3/303 (0%)
Query: 195 PGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMS 254
P Y +L D + D ++ +EM D K +N +I K ++ +
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV---GFNCLISAFCKEHRIPEA 478
Query: 255 YCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPS 314
F+++ CK D ++N L++ A + M + TY +I +
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 315 LAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPS 374
+ G + A KL EM + + SL+ + +AG +D + ++ +M GH PS
Sbjct: 539 FLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 375 APMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFT 434
LI ++G ++ A+ EM + G P+ F +I ++G+++ +++F
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFR 658
Query: 435 DMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRK 494
++ G P T++ L+ G V A L + G P T++ LL + ++
Sbjct: 659 KLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQE 718
Query: 495 LVD 497
+D
Sbjct: 719 TLD 721
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 179/415 (43%), Gaps = 9/415 (2%)
Query: 204 FDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLD 263
F S + + + LF +M+ I FS +V+ +AK+ ++ F +
Sbjct: 41 FSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFS---KVLSKIAKSKNYDLVISLFHHMEV 97
Query: 264 SDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDA 323
D SYN+++ A + M K D T +I + R+
Sbjct: 98 CGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFD 157
Query: 324 AIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIE 383
AI L +M+E FRP I+ +++D K G ++ +++++ M+ G R A Y SL+
Sbjct: 158 AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 384 SYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLP 443
+G+ A RL +M + PN FT +I+ K GK AM ++ +M R P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 444 TPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKIL 503
TY+ L+ G+VD A ++ + M + G P + TY L+ K K VD K+
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 504 LEMKTMGYSVD-VSASDVLMVYIKDGSVDHALRWLRFMGSS-GIRTNNFIVRQLFESCMK 561
EM G D ++ + ++ Y + G D A M S IRT + + L+ CM
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSIL---LYGLCM- 393
Query: 562 NALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNERHLMAILSATKHK 616
N E A L E +S ++D+ Y V+ + + + ++ L LS K
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 141/294 (47%), Gaps = 6/294 (2%)
Query: 217 LSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVL 276
+ LFD M D + YN ++ L + + + + ++ D + ++ +
Sbjct: 194 VELFDRMERDGVRADAV---TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 277 MTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNF 336
+ +F+ +G +A ++YE M + D TY +I L GR+D A ++ M +
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 337 RPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALR 396
P + +L++ K+ R+D K++ EM G Y ++I+ Y +AG+ D A
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 397 LWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHA 456
++ M RPN +++++ + +++ A+ +F +M+++ +TY+ ++
Sbjct: 371 IFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 457 SSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMG 510
G V+ A L+ S++ GL+P + +YT +++ +++ D + + +M+ G
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 52/321 (16%)
Query: 232 ISLFSAYNRVIQYLAKADKLE-MSY----CCFKKVLDSDCKIDTQSYNVLMTLFLNKGLP 286
I+ F NRV + K+E M + + ++D CKI GL
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI---------------GLV 190
Query: 287 YKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASL 346
A E+++ ME+ D TY ++ L SGR A +L ++M R+ P+ F ++
Sbjct: 191 NDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 347 VDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGF 406
+D K G+ +MK+Y EM P Y SLI G++D A ++ D M G
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 407 RPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFL------------------------ 442
P+ + +I KS ++D +F +M + G +
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 443 --------PTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRK 494
P TYS LL + +V+ A+ L+ +M + + ++TY ++ + K
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 495 LVDVAAKILLEMKTMGYSVDV 515
V+ A + + G DV
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDV 451
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 119/294 (40%), Gaps = 10/294 (3%)
Query: 118 DHVMVGGIKKPFLNASAVAKIVEVVNRWKWGPELETQLDKLQFVPKMVHITQALKVI--- 174
D + G++ + +++ + RW L + VP ++ T + V
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKE 257
Query: 175 NDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISL 234
++ L+ R+ P Y L + L D + D MV +K +
Sbjct: 258 GKFSEAMKLYEEMTRRC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV---TKGCLPD 313
Query: 235 FSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYE 294
YN +I K+ +++ F+++ DT +YN ++ + G P A EI+
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 295 SMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAG 354
M+ + TY +++ L + R++ A+ LF+ M++ + ++ M K G
Sbjct: 374 RMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 355 RLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRP 408
++ + ++ + G +P Y ++I + + + D + L+ +M+ G P
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 185/383 (48%), Gaps = 14/383 (3%)
Query: 176 DSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLF 235
D D +LSL + + Q PG Y + D L ++ + L+LF EM + + +
Sbjct: 236 DIDLALSLLKKME-QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV-- 292
Query: 236 SAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYES 295
YN +I+ L + + +++ + +++ L+ F+ +G +A ++Y+
Sbjct: 293 -TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 296 MEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGR 355
M K D TY +I RLD A +F+ M ++ P+ + +L+ KA R
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 356 LDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTM 415
+D M+++ EM G + Y +LI + +A + D A ++ +M G P+ +++
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 416 IIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAG 475
+++ +GK++ A+ +F ++R+ P TY+ ++E +G+V+ L+ S++ G
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 476 LRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGS----- 529
++P + TYT +++ ++ L + A + EMK G D + L+ +++DG
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Query: 530 -VDHALRWLRFMGSS---GIRTN 548
+ +R RF+G + G+ TN
Sbjct: 592 ELIREMRSCRFVGDASTIGLVTN 614
Score = 110 bits (274), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 160/361 (44%), Gaps = 1/361 (0%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
+N +I L + ++ + +++ C+ D +Y +++ +G A + + M
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
E+G+ Y +I +L ++ A+ LF EM + RP+ + SL+ + GR
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+ ++ +M P+ + +LI+++ K GKL A +L+DEM P+ ++ +
Sbjct: 308 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 367
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
I +LD A +F M P TY+ L++ + +VD M+L+ M+ GL
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL 427
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYI-KDGSVDHALR 535
TYT L+ + + D A + +M + G D+ +L+ + +G V+ AL
Sbjct: 428 VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALV 487
Query: 536 WLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLV 595
++ S + + + + E K E L + K ++V YT++++
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 596 R 596
R
Sbjct: 548 R 548
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 150/344 (43%), Gaps = 1/344 (0%)
Query: 269 DTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLF 328
D+ ++N L+ +A + + M C D TY +++ L K G +D A+ L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 329 QEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKA 388
++M++ P I+ +++D++ ++ ++ ++ EM G RP+ Y SLI
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 389 GKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTY 448
G+ A RL +M PN F+ +I++ K GKL A ++ +M + P TY
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 449 SCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKT 508
S L+ ++D A ++ M S P + TY L+ K K VD ++ EM
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 509 MGYSVD-VSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYES 567
G + V+ + ++ + + D+A + M S G+ + L + N E+
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 568 AKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNERHLMAILS 611
A + E S + D+ Y ++ + + ++ L LS
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 161/391 (41%), Gaps = 1/391 (0%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
Y V+ L K ++++ KK+ + YN ++ N A ++ M
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
+ + TY +I L GR A +L +M ER P+ F++L+D+ K G+L
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+ K+Y EM P Y SLI + +LD A +++ M PN + +
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
I+ K+ ++D M +F +M + G + TY+ L+ + + D+A ++ M S G+
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYI-KDGSVDHALR 535
P + TY+ LL L V+ A + ++ D+ ++++ + K G V+
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 536 WLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLV 595
+ G++ N + + L E A L E D Y +++ +
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Query: 596 RCQDEQNERHLMAILSATKHKAHAFLCGLFT 626
R D+ L+ + + + A GL T
Sbjct: 583 RDGDKAASAELIREMRSCRFVGDASTIGLVT 613
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 125/277 (45%), Gaps = 3/277 (1%)
Query: 219 LFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMT 278
L+DEM+ S I +S+ +I D+L+ + F+ ++ DC + +YN L+
Sbjct: 348 LYDEMIKRSIDPDIFTYSS---LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 279 LFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRP 338
F + E++ M + + TY +I ++ D A +F++M P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 339 SFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLW 398
++ L+D + G+++T++ V+ +Q P Y +IE KAGK++ L+
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 399 DEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASS 458
+ + G +PN +T ++ + G + A ++F +M+ G LP TY+ L+ H
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584
Query: 459 GQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKL 495
G ++ +L M S ST + +L +L
Sbjct: 585 GDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRL 621
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 159/393 (40%), Gaps = 4/393 (1%)
Query: 213 FDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQS 272
D ++LF +MV I FS +++ +AK +K ++ +++ + + +
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFS---KLLSAIAKMNKFDLVISLGEQMQNLGISHNLYT 118
Query: 273 YNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMK 332
Y++L+ F + A + M K D T ++ R+ A+ L +M
Sbjct: 119 YSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV 178
Query: 333 ERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLD 392
E ++P F +L+ + + R ++ + M G +P Y ++ K G +D
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 393 TALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLL 452
AL L +M P ++ II++ ++ A+++FT+M+ G P TY+ L+
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 453 EMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYS 512
+ G+ A +L + M + P + T++AL+ K + A K+ EM
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 513 VDV-SASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPL 571
D+ + S ++ + +D A M S N L + K + L
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMEL 418
Query: 572 LETYVESAAKVDLVLYTSVLAHLVRCQDEQNER 604
+ + V YT+++ + ++ N +
Sbjct: 419 FREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 9/282 (3%)
Query: 320 RLDAAIKLFQEM-KERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMY 378
+LD A+ LF +M K R F PS F+ L+ ++ K + D + + +MQ G + Y
Sbjct: 61 KLDDAVNLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 119
Query: 379 VSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMER 438
LI + + +L AL + +M G+ P+ ++ ++ A+S+ M
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 439 AGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDV 498
G+ P T++ L+ + A+ L + M G +P L TY ++ L KR +D+
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 499 AAKILLEMKTM----GYSVDVSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQ 554
A +L +M+ G + + D L Y +V+ AL M + GIR N
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNY---KNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 555 LFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVR 596
L + A LL +E ++V +++++ V+
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK 338
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 173/366 (47%), Gaps = 18/366 (4%)
Query: 210 SRDFDGMLSLFDEMV-HDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKI 268
++ + ML L D+MV + N ++ Y V+ + K+ + ++ +K+ + + K+
Sbjct: 207 GKEAEAML-LIDKMVEYGCQPNAVT----YGPVLNVMCKSGQTALAMELLRKMEERNIKL 261
Query: 269 DTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLF 328
D Y++++ G AF ++ ME + + TY ++I +GR D KL
Sbjct: 262 DAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 329 QEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKA 388
++M +R P+ F+ L+DS K G+L + +++ EM G P Y SLI+ + K
Sbjct: 322 RDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKE 381
Query: 389 GKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTY 448
LD A ++ D M G PN F ++I + K+ ++D + +F M G + TY
Sbjct: 382 NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 449 SCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKT 508
+ L++ G+++ A +L+ M S + P + TY LL L + A +I +++
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 509 MGYSVDVSASDVLMVYIKDGS-VDHALRWLRFMG------SSGIRTNNFIVRQLFESCMK 561
+D+ ++++ + + S VD A W F G++T N ++ L C K
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDA--WDLFCSLPLKGVKPGVKTYNIMIGGL---CKK 556
Query: 562 NALYES 567
L E+
Sbjct: 557 GPLSEA 562
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/431 (22%), Positives = 192/431 (44%), Gaps = 7/431 (1%)
Query: 177 SDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFS 236
+D ++ LFR S +P + LF + +++ +D +L+L +M + + S
Sbjct: 69 ADDAIDLFR-DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
+I + KL +++ K++ + +T +++ L+ +G +A E+ + M
Sbjct: 128 I---MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
+ D T ++ L SG+ A+ L +M E +P+ + +++ M K+G+
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQT 244
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+M++ +M+ + A Y +I+ K G LD A L++EM + G N + ++
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
I +G+ D + DM + P T+S L++ G++ A +L+ M G+
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI 364
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALR 535
P TYT+L+ K +D A +++ M + G ++ ++L+ Y K +D L
Sbjct: 365 APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE 424
Query: 536 WLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLV 595
R M G+ + L + + AK L + V ++V Y +L L
Sbjct: 425 LFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL- 483
Query: 596 RCQDEQNERHL 606
C + ++E+ L
Sbjct: 484 -CDNGESEKAL 493
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 166/359 (46%), Gaps = 4/359 (1%)
Query: 200 YVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFK 259
Y ++ D L + D +LF+EM K + YN +I A + + +
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEM---EMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 322
Query: 260 KVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSG 319
++ + +++VL+ F+ +G +A E+++ M + D TY +I K
Sbjct: 323 DMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKEN 382
Query: 320 RLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYV 379
LD A ++ M + P+ F L++ KA R+D ++++ +M G Y
Sbjct: 383 HLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYN 442
Query: 380 SLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERA 439
+LI+ + + GKL+ A L+ EM PN + ++++ +G+ + A+ IF +E++
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKS 502
Query: 440 GFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVA 499
Y+ ++ ++ +VD A L+ S+ G++PG+ TY ++ L K+ + A
Sbjct: 503 KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Query: 500 AKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFE 557
+ +M+ G++ D ++L+ ++ DG +++ + + G + ++ + +
Sbjct: 563 ELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 16/271 (5%)
Query: 328 FQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAK 387
F +RN + + LVD + D ++ ++ +M P+ + L + AK
Sbjct: 46 FSAFSDRNLSYRERLRSGLVDI-----KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAK 100
Query: 388 AGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPST 447
+ D L L +M + G N +++I + KL +A S + + G+ P T
Sbjct: 101 TKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTIT 160
Query: 448 YSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTAL---LTLLAKRKLVDVAAKILL 504
+S L+ G+V A++L + M G +P L T L L L K A +LL
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE-----AEAMLL 215
Query: 505 EMKTMGYSVD---VSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMK 561
K + Y V+ VL V K G A+ LR M I+ + + + K
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 562 NALYESAKPLLETYVESAAKVDLVLYTSVLA 592
+ ++A L +++ Y ++
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 192/434 (44%), Gaps = 40/434 (9%)
Query: 200 YVMLFDVLNE-SRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCF 258
Y ++ DV + R + +L + DEM K F+ + V+ A+ L + F
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLK--FDEFTC-STVLSACAREGLLREAKEFF 304
Query: 259 KKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKS 318
++ + T +YN L+ +F G+ +A + + ME+ C D TY ++ + ++
Sbjct: 305 AELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRA 364
Query: 319 GRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMY 378
G A + + M ++ P+ + +++D+ GKAG+ D ++K++ M+ G P+ Y
Sbjct: 365 GFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTY 424
Query: 379 VSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMER 438
+++ K + + +++ +M+ G PN + ++ G +F +M+
Sbjct: 425 NAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKS 484
Query: 439 AGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDV 498
GF P T++ L+ + G A K+Y MT AG ++TY ALL LA++
Sbjct: 485 CGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRS 544
Query: 499 AAKILLEMKTMGYS-VDVSASDVLMVYIKDGS------VDHALR-------WL------- 537
++ +MK+ G+ + S S +L Y K G+ +++ ++ W+
Sbjct: 545 GENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLL 604
Query: 538 -----RFMGSS----------GIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKV 582
R + S G + + I + +N +Y+ A+ +LE+ E
Sbjct: 605 ANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 583 DLVLYTSVLAHLVR 596
DLV Y S++ VR
Sbjct: 665 DLVTYNSLMDMYVR 678
Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 136/295 (46%), Gaps = 2/295 (0%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPY-KAFEIYES 295
AY ++ ++ K E + F+++ + +YNV++ +F G + K + +
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDE 271
Query: 296 MEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGR 355
M D T ++ + A+ G L A + F E+K + P + +L+ GKAG
Sbjct: 272 MRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGV 331
Query: 356 LDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTM 415
++ V EM+ + Y L+ +Y +AG A + + M G PN +T
Sbjct: 332 YTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTT 391
Query: 416 IIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAG 475
+I+++ K+GK D A+ +F M+ AG +P TY+ +L + + + +K+ M S G
Sbjct: 392 VIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG 451
Query: 476 LRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGS 529
P +T+ +L L + + ++ EMK+ G+ D + L+ Y + GS
Sbjct: 452 CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 164/387 (42%), Gaps = 37/387 (9%)
Query: 267 KIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIK 326
K+D Q + + + + A ++ + + E LD Y ++ + +++G+ + AI
Sbjct: 172 KLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAID 231
Query: 327 LFQEMKERNFRPSFNIFASLVDSMGKAGR------------------------------- 355
LF+ MKE P+ + ++D GK GR
Sbjct: 232 LFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSAC 291
Query: 356 -----LDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNF 410
L + + + E++ CG+ P Y +L++ + KAG AL + EM +
Sbjct: 292 AREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADS 351
Query: 411 GLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNS 470
+ ++ ++ ++G A + M + G +P TY+ +++ + +G+ D A+KL+ S
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 471 MTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIKDGSV 530
M AG P TY A+L+LL K+ + K+L +MK+ G S + + + ++ + +
Sbjct: 412 MKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 531 DHAL-RWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTS 589
D + R R M S G + L + + A + + + Y +
Sbjct: 472 DKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNA 531
Query: 590 VLAHLVRCQDEQNERHLMAILSATKHK 616
+L L R D ++ ++++ + + K
Sbjct: 532 LLNALARKGDWRSGENVISDMKSKGFK 558
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/352 (19%), Positives = 136/352 (38%), Gaps = 38/352 (10%)
Query: 194 VPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEM 253
+P Y + D ++ D L LF M + YN V+ L K +
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSM---KEAGCVPNTCTYNAVLSLLGKKSRSNE 439
Query: 254 SYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIP 313
+ + C + ++N ++ L NKG+ ++ M+ D T+ +I
Sbjct: 440 MIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLIS 499
Query: 314 SLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRP 373
+ + G A K++ EM F + +L++++ + G + V +M+ G +P
Sbjct: 500 AYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKP 559
Query: 374 SAPMYVSLIESYAKAGK-----------------------------------LDTALRLW 398
+ Y +++ YAK G L + R +
Sbjct: 560 TETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAF 619
Query: 399 DEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASS 458
+ G++P+ +F ++ ++ D A I + G P TY+ L++M+
Sbjct: 620 TLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRR 679
Query: 459 GQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMG 510
G+ A ++ ++ + L+P L +Y ++ +R L+ A ++L EM G
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/347 (17%), Positives = 144/347 (41%), Gaps = 41/347 (11%)
Query: 178 DTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSA 237
D +L LF ++ +++ VP Y + +L + + M+ +M+ D NG S A
Sbjct: 403 DEALKLF-YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI----KMLCDMKSNGCSPNRA 457
Query: 238 -YNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
+N ++ + F+++ + D ++N L++ + G A ++Y M
Sbjct: 458 TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGR- 355
+ + +TY ++ +LA+ G + + +MK + F+P+ ++ ++ K G
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY 577
Query: 356 ----------------------------------LDTSMKVYMEMQGCGHRPSAPMYVSL 381
L S + + + G++P ++ S+
Sbjct: 578 LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSM 637
Query: 382 IESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGF 441
+ + + D A + + +R G P+ + +++ + + G+ A I +E++
Sbjct: 638 LSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQL 697
Query: 442 LPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLT 488
P +Y+ +++ G + A+++ + MT G+RP + TY ++
Sbjct: 698 KPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 238 YNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESME 297
+N ++ + + + + + + + D +YN LM +++ +G +KA EI +++E
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 298 KGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRP---SFNIFASLVDSMGKAG 354
K + D +Y +I + G + A+++ EM ER RP ++N F S +MG
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFA 753
Query: 355 RLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNF 410
++ ++ M C RP+ + +++ Y +AGK A+ +I F P F
Sbjct: 754 EIEDVIEC-MAKNDC--RPNELTFKMVVDGYCRAGKYSEAMDFVS--KIKTFDPCF 804
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/163 (18%), Positives = 66/163 (40%)
Query: 321 LDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVS 380
L + + F K+ ++P IF S++ + D + + ++ G P Y S
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 381 LIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAG 440
L++ Y + G+ A + + + +P+ + +I+ + G + A+ + ++M G
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 441 FLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTY 483
P TY+ + + + G + M RP T+
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTF 774
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 172/363 (47%), Gaps = 8/363 (2%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
Y V+ + K+ + ++ +K+ + + K+D Y++++ G AF ++ M
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
E D TY +I +GR D KL ++M +R P+ F+ L+DS K G+L
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+ ++ EM G P+ Y SLI+ + K +L+ A+++ D M G P+ F ++
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
I + K+ ++D + +F +M G + TY+ L++ SG+++ A KL+ M S +
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIKDGS-VDHALR 535
RP + +Y LL L ++ A +I +++ +D+ +++ + + S VD A
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 536 WLRFMGSSGI----RTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVL 591
+ G+ R N ++ +L C K++L ++ + E A +L +
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISEL---CRKDSLSKADILFRKMTEEGHAPDELTYNILIR 586
Query: 592 AHL 594
AHL
Sbjct: 587 AHL 589
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 143/319 (44%), Gaps = 4/319 (1%)
Query: 217 LSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVL 276
L L D MV K N ++ L K+ + +++++ + + +Y +
Sbjct: 178 LELVDRMVEMGHK---PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPV 234
Query: 277 MTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNF 336
+ + G A E+ ME+ LD Y ++I L K G LD A LF EM+ + F
Sbjct: 235 LNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 294
Query: 337 RPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALR 396
+ + +L+ AGR D K+ +M P+ + LI+S+ K GKL A +
Sbjct: 295 KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQ 354
Query: 397 LWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHA 456
L EM G PN + +I+ K +L+ A+ + M G P T++ L+ +
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 457 SSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVS 516
+ ++D ++L+ M+ G+ TY L+ + ++VA K+ EM + D+
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 517 ASDVLMVYIKD-GSVDHAL 534
+ +L+ + D G ++ AL
Sbjct: 475 SYKILLDGLCDNGELEKAL 493
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 135/296 (45%), Gaps = 1/296 (0%)
Query: 201 VMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFS-AYNRVIQYLAKADKLEMSYCCFK 259
V+ F VL +S +G L D+++ + + GI+ + YN +I K ++LE +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 260 KVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSG 319
++ C D ++N+L+ + E++ M + TY ++ +SG
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 320 RLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYV 379
+L+ A KLFQEM R RP + L+D + G L+ +++++ +++ +Y+
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 380 SLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERA 439
+I A K+D A L+ + + G + + + ++I + L A +F M
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
Query: 440 GFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKL 495
G P TY+ L+ H +A +L M S+G +ST ++ +L+ +L
Sbjct: 573 GHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGEL 628
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 182/425 (42%), Gaps = 12/425 (2%)
Query: 110 RSVEPGFD-DHVMVGGIKKPFLNASAVAKIVEVVNRWKWGPELETQLDKLQFVPKMVHIT 168
R VE GF + V G + + A +E++ + + E +LD +++ I
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME---ERNIKLDAVKYSI----II 270
Query: 169 QALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSS 228
L D + +LF + + + ++ N R DG L D + S
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 229 KNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYK 288
N ++ ++ +I K KL + K+++ +T +YN L+ F + +
Sbjct: 331 PNVVT----FSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 289 AFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVD 348
A ++ + M C D T+ ++I K+ R+D ++LF+EM R + + +LV
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 349 SMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRP 408
++G+L+ + K++ EM RP Y L++ G+L+ AL ++ ++ +
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL 506
Query: 409 NFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLY 468
+ G++ +II + K+D A +F + G Y+ ++ + A L+
Sbjct: 507 DIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 469 NSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIKDG 528
MT G P TY L+ AA+++ EMK+ G+ DVS +++ + G
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSG 626
Query: 529 SVDHA 533
+D +
Sbjct: 627 ELDKS 631
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 122/283 (43%), Gaps = 1/283 (0%)
Query: 307 TYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEM 366
T +MI + +L A ++ + + P IF +L++ + R+ ++++ M
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 367 QGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKL 426
GH+P+ +L+ GK+ A+ L D M GF+PN + ++ KSG+
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 427 DIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTAL 486
+AM + ME YS +++ G +D+A L+N M G + + TY L
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 487 LTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGSSGI 545
+ D AK+L +M S +V VL+ ++K+G + A + L+ M GI
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 546 RTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYT 588
N L + K E A +++ + D++ +
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFN 407
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/430 (20%), Positives = 171/430 (39%), Gaps = 43/430 (10%)
Query: 214 DGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSY 273
D + LF +M+ + +NR+ +AK + E+ K++ +
Sbjct: 70 DDAVDLFRDMIQSRP---LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126
Query: 274 NVLMTLFLN-KGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMK 332
++++ F + L Y AF + K D + ++ L R+ A++L M
Sbjct: 127 SIMINCFCRCRKLSY-AFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 333 ERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLD 392
E +P+ +LV+ + G++ ++ + M G +P+ Y ++ K+G+
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 393 TALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFL---------- 442
A+ L +M + + +++II+ K G LD A ++F +ME GF
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 443 -------------------------PTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLR 477
P T+S L++ G++ A +L M G+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 478 PGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMV-YIKDGSVDHALRW 536
P TY +L+ K ++ A +++ M + G D+ ++L+ Y K +D L
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 537 LRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVR 596
R M G+ N L + ++ E AK L + V + D+V Y +L L
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL-- 483
Query: 597 CQDEQNERHL 606
C + + E+ L
Sbjct: 484 CDNGELEKAL 493
Score = 37.0 bits (84), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 3/178 (1%)
Query: 425 KLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYT 484
K D A+ +F DM ++ LPT ++ L A + Q + + L M S G+ + T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 485 ALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIK-DGSVDHALRWLRFMGSS 543
++ + + + A + ++ +GY D + L+ + + V AL + M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 544 GIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQ 601
G + + L N A L++ VE+ + + V Y VL V C+ Q
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN--VMCKSGQ 243
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 1/301 (0%)
Query: 308 YELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQ 367
+ +++ K G + A K+F E+ +R+ +P+ F +L++ K G LD ++ +M+
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 368 GCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLD 427
RP Y +LI + K K+D A L+DEM G PN +FT +I H+++G++D
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 428 IAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALL 487
+ + M G P Y+ L+ +G + +A + + M GLRP TYT L+
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 488 TLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDHALRWLRFMGSSGIR 546
+ V+ A +I EM G +D V S ++ K+G V A R LR M +GI+
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 547 TNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNERHL 606
++ + ++ K ++ LL+ +V Y +L L + +N L
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADML 542
Query: 607 M 607
+
Sbjct: 543 L 543
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 159/351 (45%), Gaps = 8/351 (2%)
Query: 259 KKVLDSDCKIDTQ----SYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPS 314
+KV D K Q S+N L+ + G + F + MEK D TY +I +
Sbjct: 260 QKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA 319
Query: 315 LAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPS 374
L K ++D A LF EM +R P+ IF +L+ + G +D + Y +M G +P
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379
Query: 375 APMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFT 434
+Y +L+ + K G L A + D M G RP+ +T +I+ + G ++ A+ I
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439
Query: 435 DMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRK 494
+M++ G +S L+ G+V A + M AG++P TYT ++ K+
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKG 499
Query: 495 LVDVAAKILLEMKTMGYSVDVSASDVLMVYI-KDGSVDHALRWLRFMGSSGIRTNNFIVR 553
K+L EM++ G+ V +VL+ + K G + +A L M + G+ ++
Sbjct: 500 DAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYN 559
Query: 554 QLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNER 604
L E ++A S+K ++ E DL Y S++ L R + R
Sbjct: 560 TLLEGHHRHA--NSSKRYIQK-PEIGIVADLASYKSIVNELDRASKDHRNR 607
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 6/293 (2%)
Query: 200 YVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFK 259
Y L + L + DG LFDEM +F+ +I ++ ++++ ++
Sbjct: 313 YSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT---LIHGHSRNGEIDLMKESYQ 369
Query: 260 KVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSG 319
K+L + D YN L+ F G A I + M + D TY +I + G
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 320 RLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYV 379
++ A+++ +EM + F++LV M K GR+ + + EM G +P Y
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Query: 380 SLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERA 439
+++++ K G T +L EM+ G P+ + +++ K G++ A + M
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Query: 440 GFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAK 492
G +P TY+ LLE H ++ K Y G+ L++Y +++ L +
Sbjct: 550 GVVPDDITYNTLLEGHHRHA---NSSKRYIQKPEIGIVADLASYKSIVNELDR 599
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 129/333 (38%), Gaps = 36/333 (10%)
Query: 319 GRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMY 378
G + AI+ F+ ++ F +L+D M K T YME+ G + ++
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243
Query: 379 VSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSG-------------- 424
L+ + K G + A +++DE+ +P F +I + K G
Sbjct: 244 NILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEK 303
Query: 425 ---------------------KLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDS 463
K+D A +F +M + G +P ++ L+ H+ +G++D
Sbjct: 304 SRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDL 363
Query: 464 AMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVLM 522
+ Y M S GL+P + Y L+ K + A I+ M G D ++ + ++
Sbjct: 364 MKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLID 423
Query: 523 VYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKV 582
+ + G V+ AL + M +GI + L K A+ L + + K
Sbjct: 424 GFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKP 483
Query: 583 DLVLYTSVLAHLVRCQDEQNERHLMAILSATKH 615
D V YT ++ + D Q L+ + + H
Sbjct: 484 DDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 169/364 (46%), Gaps = 10/364 (2%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
Y V+ L K+ ++ F+K+ + + K Y++++ G A ++ M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
E D TY +I L G+ D K+ +EM RN P F++L+D K G+L
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+ ++Y EM G P Y SLI+ + K L A +++D M G P+ ++++
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
I S+ K+ ++D M +F ++ G +P TY+ L+ SG++++A +L+ M S G+
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV 451
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIKDGS-VDHALR 535
P + TY LL L ++ A +I +M+ ++ + ++++ + + S VD A
Sbjct: 452 PPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWS 511
Query: 536 WLRFMGSSGIR----TNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVL 591
+ G++ T N ++ L C K +L E A L E D Y ++
Sbjct: 512 LFCSLSDKGVKPDVVTYNVMIGGL---CKKGSLSE-ADMLFRKMKEDGCTPDDFTYNILI 567
Query: 592 -AHL 594
AHL
Sbjct: 568 RAHL 571
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 179/369 (48%), Gaps = 8/369 (2%)
Query: 154 QLDKLQFVPKMVHITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDF 213
Q D++ + P + + ++ +S +L LFR + ++ + Y ++ D L + F
Sbjct: 207 QPDEVTYGPVLNRLCKS----GNSALALDLFRKMEERNIKASVVQ-YSIVIDSLCKDGSF 261
Query: 214 DGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSY 273
D LSLF+EM K + Y+ +I L K + ++++ + D ++
Sbjct: 262 DDALSLFNEMEMKGIKADV---VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 274 NVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKE 333
+ L+ +F+ +G +A E+Y M + D TY +I K L A ++F M
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 334 RNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDT 393
+ P ++ L++S KA R+D M+++ E+ G P+ Y +L+ + ++GKL+
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 394 ALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLE 453
A L+ EM G P+ + ++++ +G+L+ A+ IF M+++ Y+ ++
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIH 498
Query: 454 MHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSV 513
++ +VD A L+ S++ G++P + TY ++ L K+ + A + +MK G +
Sbjct: 499 GMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Query: 514 DVSASDVLM 522
D ++L+
Sbjct: 559 DDFTYNILI 567
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 146/333 (43%), Gaps = 9/333 (2%)
Query: 269 DTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLF 328
D +Y ++ G A +++ ME+ Y ++I SL K G D A+ LF
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 329 QEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKA 388
EM+ + + ++SL+ + G+ D K+ EM G P + +LI+ + K
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328
Query: 389 GKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTY 448
GKL A L++EM G P+ + +I+ K L A +F M G P TY
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 449 SCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKT 508
S L+ + + +VD M+L+ ++S GL P TY L+ + ++ A ++ EM +
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 509 MGYSVDVSASDVLMVYIKD-GSVDHALRWLRFMGSS----GIRTNNFIVRQLFESCMKNA 563
G V +L+ + D G ++ AL M S GI N I+ + + +
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNA----S 504
Query: 564 LYESAKPLLETYVESAAKVDLVLYTSVLAHLVR 596
+ A L + + K D+V Y ++ L +
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 146/327 (44%), Gaps = 1/327 (0%)
Query: 269 DTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLF 328
DT +++ L+ F +G +A + + M + + D T +I L GR+ A+ L
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLI 198
Query: 329 QEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKA 388
M E F+P + +++ + K+G ++ ++ +M+ + S Y +I+S K
Sbjct: 199 DRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD 258
Query: 389 GKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTY 448
G D AL L++EM + G + + ++ +I GK D + +M +P T+
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 449 SCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKT 508
S L+++ G++ A +LYN M + G+ P TY +L+ K + A ++ M +
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 509 MGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYES 567
G D+ +L+ Y K VD +R R + S G+ N L ++ +
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNA 438
Query: 568 AKPLLETYVESAAKVDLVLYTSVLAHL 594
AK L + V +V Y +L L
Sbjct: 439 AKELFQEMVSRGVPPSVVTYGILLDGL 465
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 116/259 (44%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
YN +I K + L + F ++ C+ D +Y++L+ + ++ +
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI 411
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
+ TY ++ +SG+L+AA +LFQEM R PS + L+D + G L
Sbjct: 412 SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGEL 471
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+ +++++ +MQ +Y +I A K+D A L+ + G +P+ + ++
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
I K G L A +F M+ G P TY+ L+ H + S+++L M G
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGF 591
Query: 477 RPGLSTYTALLTLLAKRKL 495
ST ++ +L+ R+L
Sbjct: 592 SADSSTIKMVIDMLSDRRL 610
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 180/399 (45%), Gaps = 9/399 (2%)
Query: 176 DSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLF 235
++ S +F+ A + + GD + + S DFD + L + +N + +
Sbjct: 56 EAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRI---RLENRVIIE 112
Query: 236 SAYNRVIQYLAKADKLEMSYCCFKKVLDS-DCKIDTQSYNVLMTLFLNKGLPYKAFEIYE 294
++ V + KA + + F +++D CK +S+N ++ + +N+GL ++ E Y+
Sbjct: 113 RSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYD 172
Query: 295 SMEKGECSL----DGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSM 350
+ ++ +G ++ L+I +L K +D AI++F+ M ER P + +L+D +
Sbjct: 173 YVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGL 232
Query: 351 GKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNF 410
K R+D ++ + EMQ G PS +Y LI+ K G L +L D M + G PN
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292
Query: 411 GLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNS 470
+ +I GKLD A+S+ M + +P TY L+ + A++L +S
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 471 MTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGS 529
M G Y+ L++ L K + A + +M G ++ VL+ ++G
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 530 VDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESA 568
+ A L M +SG N + L + K L E A
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Score = 119 bits (299), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 161/348 (46%), Gaps = 8/348 (2%)
Query: 195 PGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMS 254
P Y +L D L + D + L D M K + YN +I L KL+ +
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL---KGCVPNEVTYNTLIHGLCLKGKLDKA 311
Query: 255 YCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPS 314
++++ S C + +Y L+ + + A + SME+ L+ Y ++I
Sbjct: 312 VSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISG 371
Query: 315 LAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPS 374
L K G+ + A+ L+++M E+ +P+ +++ LVD + + G+ + + ++ M G P+
Sbjct: 372 LFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 375 APMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFT 434
A Y SL++ + K G + A+++W EM G N ++++I+ G++ AM +++
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 435 DMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSM---TSAGLRPGLSTYTALLTLLA 491
M G P YS +++ G +D+A+KLY+ M +P + TY LL L
Sbjct: 492 KMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLC 551
Query: 492 KRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYI--KDGSVDHALRWL 537
+K + A +L M G DV + + + K S D +L
Sbjct: 552 MQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFL 599
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 139/300 (46%), Gaps = 1/300 (0%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
Y ++ L K ++++ + ++ C YNVL+ KG + ++ ++M
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
C + TY +I L G+LD A+ L + M P+ + +L++ + K R
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
++++ M+ G+ + +Y LI K GK + A+ LW +M G +PN +++++
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
++ + GK + A I M +G LP TYS L++ +G + A++++ M G
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDHALR 535
Y+ L+ L V A + +M T+G D V+ S ++ GS+D AL+
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 174/403 (43%), Gaps = 14/403 (3%)
Query: 206 VLNESRDFDGMLSLFDEMVHDS-----SKNGISLFSAYNRVIQYLAKADKLEMSYCCFKK 260
++NE G L +D +V+ + S NG+S +N VI+ L K ++ + F+
Sbjct: 158 IINEGLYHRG-LEFYDYVVNSNMNMNISPNGLS----FNLVIKALCKLRFVDRAIEVFRG 212
Query: 261 VLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGR 320
+ + C D +Y LM + +A + + M+ CS Y ++I L K G
Sbjct: 213 MPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGD 272
Query: 321 LDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVS 380
L KL M + P+ + +L+ + G+LD ++ + M P+ Y +
Sbjct: 273 LTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGT 332
Query: 381 LIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAG 440
LI K + A+RL M G+ N +++++I K GK + AMS++ M G
Sbjct: 333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Query: 441 FLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAA 500
P YS L++ G+ + A ++ N M ++G P TY++L+ K L + A
Sbjct: 393 CKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAV 452
Query: 501 KILLEMKTMGYSVDVSASDVLMVYIKD-GSVDHALRWLRFMGSSGIRTNNFIVRQLFESC 559
++ EM G S + VL+ + G V A+ M + GI+ + + +
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Query: 560 MKNALYESAKPLLETYV---ESAAKVDLVLYTSVLAHLVRCQD 599
++A L + E ++ D+V Y +L L +D
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKD 555
>sp|Q9M1D8|PP288_ARATH Pentatricopeptide repeat-containing protein At3g60050
OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1
Length = 473
Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 161/368 (43%), Gaps = 8/368 (2%)
Query: 150 ELETQLDKLQFVPKMVHITQALKVINDSDTS---LSLFRWAKRQSWYVPGDECYVMLFDV 206
EL ++ L +V I + L N + + F W+ Q + Y +L +
Sbjct: 99 ELNVRVSGLLVREVLVGILRNLSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKI 158
Query: 207 LNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDC 266
E ++ M L DEMV D F N +I +A + + F K +
Sbjct: 159 FAECGEYKAMWRLVDEMVQDGFPTTARTF---NLLICSCGEAGLAKQAVVQFMKSKTFNY 215
Query: 267 KIDTQSYNVLMTLFLNKGLPYKAFE-IYESMEKGECSLDGSTYELMIPSLAKSGRLDAAI 325
+ SYN ++ L YK E +Y+ M + S D TY +++ + + G++D
Sbjct: 216 RPFKHSYNAILNSLLGVK-QYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFD 274
Query: 326 KLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESY 385
+LF EM F P + L+ +GK + ++ M+ G PS Y +LI+
Sbjct: 275 RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL 334
Query: 386 AKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTP 445
++AG L+ DEM AG RP+ +T++I + SG+LD A +F +M G LP
Sbjct: 335 SRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 446 STYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLE 505
TY+ ++ +G+ A L M S G P Y+ L++ L K + A K++ E
Sbjct: 395 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRE 454
Query: 506 MKTMGYSV 513
M G+ V
Sbjct: 455 MVKKGHYV 462
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 1/314 (0%)
Query: 306 STYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYME 365
++Y L++ A+ G A +L EM + F + F L+ S G+AG ++ +M+
Sbjct: 150 NSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMK 209
Query: 366 MQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGK 425
+ +RP Y +++ S + ++ +M GF P+ + +++ ++ + GK
Sbjct: 210 SKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGK 269
Query: 426 LDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTA 485
+D +F +M R GF P TY+ LL + + +A+ N M G+ P + YT
Sbjct: 270 MDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTT 329
Query: 486 LLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMV-YIKDGSVDHALRWLRFMGSSG 544
L+ L++ ++ L EM G DV V++ Y+ G +D A R M G
Sbjct: 330 LIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKG 389
Query: 545 IRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNER 604
N F + + A LL+ + V+Y++++++L + R
Sbjct: 390 QLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEAR 449
Query: 605 HLMAILSATKHKAH 618
++ + H H
Sbjct: 450 KVIREMVKKGHYVH 463
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 173/402 (43%), Gaps = 6/402 (1%)
Query: 200 YVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFS-AYNRVIQYLAKADKLEMSYCCF 258
Y +L D L + R+ D L EMV +GI++ Y+ I ++K +E + F
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVS----HGINIKPYMYDCCICVMSKEGVMEKAKALF 370
Query: 259 KKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKS 318
++ S Q+Y L+ + + + +E+ M+K + TY ++ + S
Sbjct: 371 DGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 319 GRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMY 378
G LD A + +EM RP+ I+ +L+ + + R +M+V EM+ G P Y
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 379 VSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMER 438
SLI +KA ++D A EM G +PN + I + ++ + A +M
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 439 AGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDV 498
G LP + L+ + G+V A Y SM G+ TYT L+ L K VD
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 499 AAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFE 557
A +I EM+ G + DV + VL+ + K G++ A M G+ N I L
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 558 SCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQD 599
++ E AK LL+ + V Y +++ + D
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 180/421 (42%), Gaps = 25/421 (5%)
Query: 189 RQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGI----SLFSAYNRVIQY 244
++ P CY L L++++ D S EMV + K + S Y ++
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538
Query: 245 LAKADKL--EMSYCCF--KKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGE 300
A ADK EM C KVL + L+ + KG +A Y SM
Sbjct: 539 -ASADKYVKEMRECGVLPNKVLCTG----------LINEYCKKGKVIEACSAYRSMVDQG 587
Query: 301 CSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSM 360
D TY +++ L K+ ++D A ++F+EM+ + P + L++ K G + +
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 361 KVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESH 420
++ EM G P+ +Y L+ + ++G+++ A L DEM + G PN + II+ +
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 421 AKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGL 480
KSG L A +F +M+ G +P Y+ L++ V+ A+ ++ + G
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASST 766
Query: 481 STYTALLTLLAKRKLVDVAAKILLEM-----KTMGYSVDVSASDVLMVYIKDGSVDHALR 535
+ + AL+ + K ++ ++L + G DV+ + ++ K+G+++ A
Sbjct: 767 APFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826
Query: 536 WLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLV 595
M ++ + L K P+ + + + + D ++Y+ ++ +
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFL 886
Query: 596 R 596
+
Sbjct: 887 K 887
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/534 (21%), Positives = 218/534 (40%), Gaps = 75/534 (14%)
Query: 132 ASAVAKIVEVVNRWKWGPELETQLDKLQFVPKMVHITQALKVINDSDTSLSLFRWAKRQS 191
+ A A+I ++ + W L + ++ P++V K ++D LS F W Q
Sbjct: 32 SDASAEIAGILKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQK 91
Query: 192 W---------YVPGDECYVMLFD----------------------VLNESRDF-----DG 215
++ D C F+ ++ S++F DG
Sbjct: 92 VTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDG 151
Query: 216 ML--SLFDEMVHD----------SSKNGISLFSAYNR---VIQYLAKADKLEMSYCCFKK 260
+L LFD + SS G+ L +R ++ L + ++L++ + +K
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 261 VLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEK----GECSLDGS---------- 306
+++ + D ++Y++L+ G ++ EK ++DG+
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 307 -------TYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTS 359
TY+++I L K RL+ A L EM + ++ L+D + K D +
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 360 MKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIES 419
+ EM G MY I +K G ++ A L+D M +G P + +IE
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 420 HAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPG 479
+ + + + +M++ + +P TY +++ SSG +D A + M ++G RP
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 480 LSTYTALL-TLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYI-KDGSVDHALRWL 537
+ YT L+ T L + D A ++L EMK G + D+ + L++ + K +D A +L
Sbjct: 452 VVIYTTLIKTFLQNSRFGD-AMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 538 RFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVL 591
M +G++ N F ++ + + SA ++ E + VL T ++
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 146/321 (45%), Gaps = 15/321 (4%)
Query: 194 VPGD-ECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGIS--LFSAYNRVIQYLAKADK 250
+ GD + Y +L + L ++ D +F EM GI+ +FS Y +I +K
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREM----RGKGIAPDVFS-YGVLINGFSKLGN 642
Query: 251 LEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYEL 310
++ + F ++++ + YN+L+ F G KA E+ + M + TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 311 MIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVY-MEMQGC 369
+I KSG L A +LF EMK + P ++ +LVD + ++ ++ ++ +GC
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 370 GHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGF----RPNFGLFTMIIESHAKSGK 425
+AP + +LI K GK + + + + F +PN + ++I+ K G
Sbjct: 763 AS-STAP-FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGN 820
Query: 426 LDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTA 485
L+ A +F M+ A +PT TY+ LL + G+ +++ +AG+ P Y+
Sbjct: 821 LEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSV 880
Query: 486 LLTLLAKRKLVDVAAKILLEM 506
++ K + A ++ +M
Sbjct: 881 IINAFLKEGMTTKALVLVDQM 901
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 105/262 (40%), Gaps = 13/262 (4%)
Query: 195 PGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMS 254
P Y + D +S D LFDEM K + Y ++ + + +E +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEM---KLKGLVPDSFVYTTLVDGCCRLNDVERA 751
Query: 255 YCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGS----TYEL 310
F C T +N L+ G E+ + G G TY +
Sbjct: 752 ITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNI 810
Query: 311 MIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCG 370
MI L K G L+AA +LF +M+ N P+ + SL++ K GR V+ E G
Sbjct: 811 MIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Query: 371 HRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIA-----GFRPNFGLFTMIIESHAKSGK 425
P MY +I ++ K G AL L D+M G + + ++ AK G+
Sbjct: 871 IEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGE 930
Query: 426 LDIAMSIFTDMERAGFLPTPST 447
+++A + +M R ++P +T
Sbjct: 931 MEVAEKVMENMVRLQYIPDSAT 952
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 178/401 (44%), Gaps = 44/401 (10%)
Query: 149 PELETQLDK--LQFVPKMVHITQALKVINDS-DTSLSLFRWAKRQSWYVPGDECYVMLFD 205
P+LE L++ ++ P + I + L D+ + F WA +Q Y E Y +
Sbjct: 98 PKLELALNESGVELRPGL--IERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVK 155
Query: 206 VLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSD 265
+L++ R F + L +EM ++ +
Sbjct: 156 ILSKMRQFGAVWGLIEEMRKENPQ------------------------------------ 179
Query: 266 CKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAI 325
I+ + + VL+ F + + KA E+ + M K D + ++ +L K G + A
Sbjct: 180 -LIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAA 238
Query: 326 KLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESY 385
KLF++M+ R F + F SL+ + G++ + V ++M G P Y +L+ Y
Sbjct: 239 KLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGY 297
Query: 386 AKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTP 445
A AGK+ A L +MR GF PN +T++I++ K +++ AM +F +MER
Sbjct: 298 ANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 357
Query: 446 STYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLE 505
TY+ L+ G++D + + M GL P TY ++ K++ + +++ +
Sbjct: 358 VTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEK 417
Query: 506 MKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGSSGI 545
M+ + Y D+ +V++ + K G V A+R M +G+
Sbjct: 418 MRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGL 458
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 1/222 (0%)
Query: 269 DTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLF 328
D Y L++ + N G A+++ M + + + Y ++I +L K R++ A+K+F
Sbjct: 286 DIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVF 345
Query: 329 QEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKA 388
EM+ + +LV K G++D V +M G PS Y+ ++ ++ K
Sbjct: 346 VEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKK 405
Query: 389 GKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTY 448
+ L L ++MR + P+ G++ ++I K G++ A+ ++ +ME G P T+
Sbjct: 406 ESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTF 465
Query: 449 SCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLL 490
++ AS G + A + M + GL +S Y L LL
Sbjct: 466 VIMINGLASQGCLLEASDHFKEMVTRGL-FSVSQYGTLKLLL 506
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 109/266 (40%), Gaps = 10/266 (3%)
Query: 335 NFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTA 394
RP + +++ G AG L V+ Q + S +Y S+++ +K +
Sbjct: 110 ELRPG--LIERVLNRCGDAGNLGYRFFVWAAKQP-RYCHSIEVYKSMVKILSKMRQFGAV 166
Query: 395 LRLWDEMRIAG---FRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCL 451
L +EMR P LF ++++ A + + A+ + +M + GF P + CL
Sbjct: 167 WGLIEEMRKENPQLIEPE--LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCL 224
Query: 452 LEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGY 511
L+ G V A KL+ M L +T+LL + + A +L++M G+
Sbjct: 225 LDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGF 283
Query: 512 SVD-VSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKP 570
D V +++L Y G + A LR M G N L ++ K E A
Sbjct: 284 EPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMK 343
Query: 571 LLETYVESAAKVDLVLYTSVLAHLVR 596
+ + D+V YT++++ +
Sbjct: 344 VFVEMERYECEADVVTYTALVSGFCK 369
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 149/323 (46%), Gaps = 13/323 (4%)
Query: 193 YVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISL-FSAYNRVIQYLAKA--- 248
Y P Y + D L +S+ D L L + M K+GI YN +I L +
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRM----EKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 249 -DKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGST 307
D M C K+ + D ++N L+ + +G +A E YE M + D T
Sbjct: 238 SDATRMVSCMTKREIYPD----VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 308 YELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQ 367
Y L+I L RLD A ++F M + P ++ L++ K+ +++ MK++ EM
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 368 GCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLD 427
G + Y LI+ Y +AGKL+ A ++ M G PN + +++ +GK++
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 428 IAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALL 487
A+ I DM++ G TY+ ++ +G+V A +Y S+ GL P + TYT ++
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Query: 488 TLLAKRKLVDVAAKILLEMKTMG 510
L K+ L A + +MK G
Sbjct: 474 LGLYKKGLRREADALFRKMKEDG 496
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 151/337 (44%), Gaps = 4/337 (1%)
Query: 217 LSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVL 276
L +FD+MV K + + YN +I L K+ +++ + ++ D +YN L
Sbjct: 171 LYMFDQMVGMGYKPNVVI---YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 277 MTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNF 336
++ + G A + M K E D T+ +I + K GR+ A + ++EM R+
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 337 RPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALR 396
P ++ L+ + RLD + +++ M G P Y LI Y K+ K++ ++
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 397 LWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHA 456
L+ EM G N +T++I+ + ++GKL++A IF M G P TY+ LL
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 457 SSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVS 516
+G+++ A+ + M G+ + TY ++ + K V A I + G D+
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW 467
Query: 517 ASDVLMVYI-KDGSVDHALRWLRFMGSSGIRTNNFIV 552
+M+ + K G A R M GI N V
Sbjct: 468 TYTTMMLGLYKKGLRREADALFRKMKEDGILPNECYV 504
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 158/364 (43%), Gaps = 5/364 (1%)
Query: 161 VPKMVHITQALKVIND-SDTSLSLFRWAKRQSWYVPGDECYV-MLFDVLNESRDFDGMLS 218
+P + ++ L I+ + ++ W + Q +P + C +L + LS
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 219 LFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMT 278
+M+ + I F + ++ + D++ + F +++ K + YN ++
Sbjct: 138 FLGKMIKLGHEPSIVTFGS---LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 279 LFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRP 338
A ++ MEK D TY +I L SGR A ++ M +R P
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 339 SFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLW 398
F +L+D+ K GR+ + + Y EM P Y LI +LD A ++
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 399 DEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASS 458
M G P+ ++++I + KS K++ M +F +M + G + TY+ L++ + +
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 459 GQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSAS 518
G+++ A +++ M G+ P + TY LL L ++ A IL +M+ G D+
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 519 DVLM 522
++++
Sbjct: 435 NIII 438
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 136/315 (43%), Gaps = 3/315 (0%)
Query: 306 STYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYME 365
T +++ + +L A+ +M + PS F SL++ + R+ ++ ++ +
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ 176
Query: 366 MQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGK 425
M G G++P+ +Y ++I+ K+ ++D AL L + M G P+ + +I SG+
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 426 LDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTA 485
A + + M + P T++ L++ G+V A + Y M L P + TY+
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 486 LLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGSSG 544
L+ L +D A ++ M + G DV +L+ Y K V+H ++ M G
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 545 IRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNER 604
+ N L + + A+ + V +++ Y +L L C + + E+
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL--CDNGKIEK 414
Query: 605 HLMAILSATKHKAHA 619
L+ + K+ A
Sbjct: 415 ALVILADMQKNGMDA 429
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 1/172 (0%)
Query: 425 KLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYT 484
KLD ++ +F M + LP+ + +S LL + + D + L+ M G+ L T
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 485 ALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDHALRWLRFMGSS 543
LL + + +A L +M +G+ V+ +L + + V AL M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 544 GIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLV 595
G + N I + + K+ ++A LL + D+V Y S+++ L
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 175/427 (40%), Gaps = 39/427 (9%)
Query: 165 VHITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMV 224
H+ L V D ++ LF K + P Y +L L S L+L EM
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKEME 350
Query: 225 HDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKG 284
K I Y +I L K E + ++L+ + +YN L+ + +G
Sbjct: 351 ETGIKPNIH---TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRG 407
Query: 285 LPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFA 344
+ A ++ E ME + S + TY +I KS + A+ + +M ER P +
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYN 466
Query: 345 SLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIA 404
SL+D ++G D++ ++ M G P Y S+I+S K+ +++ A L+D +
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 405 GFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSA 464
G PN ++T +I+ + K+GK+D A + M LP T++ L+ + G++ A
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 465 MKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVY 524
L M GL+P +ST T L+ L
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRL---------------------------------- 612
Query: 525 IKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDL 584
+KDG DHA + M SSG + + ++ + A+ ++ E+ DL
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 585 VLYTSVL 591
Y+S++
Sbjct: 673 FTYSSLI 679
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/498 (20%), Positives = 202/498 (40%), Gaps = 53/498 (10%)
Query: 145 WKWGPELETQLDKLQFVPKMVHITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLF 204
W P L++ + + P H++ + D T+L+ W + Y Y L
Sbjct: 75 WHKSPSLKSMVSAIS--PS--HVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLL 130
Query: 205 DVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDS 264
+L + + + M+ G +L+ + + + K ++ E+ Y
Sbjct: 131 TLLINNGYVGVVFKIRLLMIKSCDSVGDALYVL--DLCRKMNKDERFELKY--------- 179
Query: 265 DCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAA 324
K+ YN L+ GL + ++Y M + + + TY M+ K G ++ A
Sbjct: 180 --KLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEA 237
Query: 325 IKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIES 384
+ ++ E P F + SL+ + LD++ KV+ EM G R + Y LI
Sbjct: 238 NQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHG 297
Query: 385 YAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPT 444
A ++D A+ L+ +M+ P +T++I+S S + A+++ +ME G P
Sbjct: 298 LCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 445 PSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILL 504
TY+ L++ S + + A +L M GL P + TY AL+ KR +++ A ++
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 505 EMKTMGYSVD-----------------------------------VSASDVLMVYIKDGS 529
M++ S + V+ + ++ + G+
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 530 VDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTS 589
D A R L M G+ + + + +S K+ E A L ++ + ++V+YT+
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA 537
Query: 590 VLAHLVRCQDEQNERHLM 607
++ + + +E HLM
Sbjct: 538 LIDGYCK-AGKVDEAHLM 554
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 168/415 (40%), Gaps = 23/415 (5%)
Query: 194 VPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEM 253
VP Y + D L +S+ + LFD + + +++A +I KA K++
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA---LIDGYCKAGKVDE 550
Query: 254 SYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIP 313
++ +K+L +C ++ ++N L+ G +A + E M K ST ++I
Sbjct: 551 AHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610
Query: 314 SLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRP 373
L K G D A FQ+M +P + + + + + + GRL + + +M+ G P
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 374 SAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIES--HAKSGK------ 425
Y SLI+ Y G+ + A + MR G P+ F +I+ K GK
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEP 730
Query: 426 ----------LDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMT-SA 474
D + + M P +Y L+ G + A K+++ M +
Sbjct: 731 ELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790
Query: 475 GLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYI-KDGSVDHA 533
G+ P + ALL+ K K + AAK++ +M +G+ + + VL+ + K G +
Sbjct: 791 GISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERG 850
Query: 534 LRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYT 588
+ + G + + + + K L E+ L ++ K Y+
Sbjct: 851 TSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYS 905
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 125/295 (42%), Gaps = 22/295 (7%)
Query: 212 DFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQ 271
DFD S F +M+ +K ++ + IQ + +L + K+ ++ D
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTF---IQTYCREGRLLDAEDMMAKMRENGVSPDLF 673
Query: 272 SYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSL--AKSGR--------- 320
+Y+ L+ + + G AF++ + M C T+ +I L K G+
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 321 -------LDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQ-GCGHR 372
D ++L ++M E + P+ + L+ + + G L + KV+ MQ G
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 373 PSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSI 432
PS ++ +L+ K K + A ++ D+M G P ++I K G+ + S+
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSV 853
Query: 433 FTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALL 487
F ++ + G+ + +++ G V++ +L+N M G + TY+ L+
Sbjct: 854 FQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLI 908
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 22/261 (8%)
Query: 214 DGMLSLFDEMVHDSSKNGIS--LFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQ 271
+G L ++M+ +NG+S LF+ Y+ +I+ + ++ K++ D+ C+
Sbjct: 650 EGRLLDAEDMMAKMRENGVSPDLFT-YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 272 SYNVLMTLFL------NKGLPYK------------AFEIYESMEKGECSLDGSTYELMIP 313
++ L+ L KG + E+ E M + + + +YE +I
Sbjct: 709 TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Query: 314 SLAKSGRLDAAIKLFQEM-KERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHR 372
+ + G L A K+F M + PS +F +L+ K + + + KV +M GH
Sbjct: 769 GICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHL 828
Query: 373 PSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSI 432
P LI K G+ + ++ + G+ + + +II+ K G ++ +
Sbjct: 829 PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYEL 888
Query: 433 FTDMERAGFLPTPSTYSCLLE 453
F ME+ G + TYS L+E
Sbjct: 889 FNVMEKNGCKFSSQTYSLLIE 909
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 7/317 (2%)
Query: 235 FSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLF-LNKGLPYKAFEIY 293
+++N ++ L K+ ++E +Y F+ L +DT +YNV++ + L K P KA E+
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELFR-ALRGRFSVDTVTYNVILNGWCLIKRTP-KALEVL 218
Query: 294 ESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKA 353
+ M + + + +TY M+ ++G++ A + F EMK+R+ + ++V G A
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 278
Query: 354 GRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLF 413
G + + V+ EM G PS Y ++I+ K ++ A+ +++EM G+ PN +
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 414 TMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTS 473
++I +G+ + ME G P TY+ ++ ++ +V+ A+ L+ M S
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 474 AGLRPGLSTYTALLTLLAKRKLVD---VAAKILLEMKTMGY-SVDVSASDVLMVYIKDGS 529
P L TY L++ + RK + VA K+LLEM G+ + + VL + G+
Sbjct: 399 GDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGN 458
Query: 530 VDHALRWLRFMGSSGIR 546
A LR SG R
Sbjct: 459 QAFAKEILRLQSKSGSR 475
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 96/236 (40%), Gaps = 2/236 (0%)
Query: 373 PSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSI 432
PS + + E YA AGK D A++L+ M G + F I++ KS +++ A +
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 433 FTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAK 492
F + R F TY+ +L + A+++ M G+ P L+TY +L +
Sbjct: 184 FRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR 242
Query: 493 RKLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFI 551
+ A + LEMK +D V+ + V+ + G + A M G+ +
Sbjct: 243 AGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVAT 302
Query: 552 VRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNERHLM 607
+ + K E+A + E V + ++ Y ++ L + LM
Sbjct: 303 YNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELM 358
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 196 GDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISL-FSAYNRVIQYLAKADKLEMS 254
G E V ++VL G S +E++ G F YN +I+Y ++ ++E +
Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKA 389
Query: 255 YCCFKKVLDSDCKIDTQSYNVLMT-LFLNK 283
F+K+ DC + +YN+L++ +F+ K
Sbjct: 390 LGLFEKMGSGDCLPNLDTYNILISGMFVRK 419
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 169/381 (44%), Gaps = 4/381 (1%)
Query: 217 LSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVL 276
++L D+MV + F+ ++ L + +K + ++++ C+ D +Y +
Sbjct: 155 VALVDQMVEMGYQPDTVTFTT---LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 211
Query: 277 MTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNF 336
+ +G P A + MEKG+ D Y +I SL K +D A+ LF EM +
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 337 RPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALR 396
RP ++SL+ + GR + ++ +M P+ + SLI+++AK GKL A +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 397 LWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHA 456
L+DEM PN + +I +LD A IFT M LP TY+ L+
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 457 SSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVS 516
+ +V M+L+ M+ GL TYT L+ + D A + +M + G ++
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 517 ASDVLMVYI-KDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETY 575
+ L+ + K+G ++ A+ ++ S + + + + E K E L +
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 576 VESAAKVDLVLYTSVLAHLVR 596
K D++ Y ++++ +
Sbjct: 512 SLKGVKPDVIAYNTMISGFCK 532
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 152/356 (42%), Gaps = 13/356 (3%)
Query: 235 FSAYNRVIQYLAKADKL-EMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIY 293
F NR+ + +A D++ EM Y + DT ++ L+ +A +
Sbjct: 145 FCHGNRISEAVALVDQMVEMGY-----------QPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 294 ESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKA 353
E M C D TY +I L K G D A+ L +M++ I+++++DS+ K
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 354 GRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLF 413
+D ++ ++ EM G RP Y SLI G+ A RL +M PN F
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 414 TMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTS 473
+I++ AK GKL A +F +M + P TY+ L+ ++D A +++ M S
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 474 AGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDH 532
P + TY L+ K K V ++ +M G + V+ + ++ + + D+
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 533 ALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYT 588
A + M S G+ N L + KN E A + E +S + D+ Y
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYN 489
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 164/351 (46%), Gaps = 10/351 (2%)
Query: 200 YVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFK 259
Y + D L + R D L+LF EM D+ +F+ Y+ +I L + +
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEM--DNKGIRPDVFT-YSSLISCLCNYGRWSDASRLLS 299
Query: 260 KVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSG 319
+L+ + ++N L+ F +G +A ++++ M + + TY +I
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 320 RLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYV 379
RLD A ++F M ++ P + +L++ KA ++ M+++ +M G + Y
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 380 SLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERA 439
+LI + +A D A ++ +M G PN + +++ K+GKL+ AM +F ++++
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 440 GFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVA 499
P TY+ + E +G+V+ L+ S++ G++P + Y +++ K+ L + A
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 500 AKILLEMKTMGYSVDVSASDVLM-VYIKDGS------VDHALRWLRFMGSS 543
+ ++MK G D + L+ +++DG + +R RF G +
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 590
Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 3/277 (1%)
Query: 219 LFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMT 278
LFDEM+ S I YN +I D+L+ + F ++ DC D +YN L+
Sbjct: 332 LFDEMIQRSIDPNIV---TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 279 LFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRP 338
F E++ M + + TY +I ++ D A +F++M P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 339 SFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLW 398
+ + +L+D + K G+L+ +M V+ +Q P Y + E KAGK++ L+
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 399 DEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASS 458
+ + G +P+ + +I K G + A ++F M+ G LP TY+ L+ H
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 459 GQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKL 495
G ++ +L M S STY + +L +L
Sbjct: 569 GDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 605
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 135/300 (45%), Gaps = 3/300 (1%)
Query: 294 ESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKA 353
E ME S + TY +MI L + +L A+ + +M + + PS SL++
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 354 GRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLF 413
R+ ++ + +M G++P + +L+ + K A+ L + M + G +P+ +
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 414 TMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTS 473
+I K G+ D+A+++ ME+ YS +++ VD A+ L+ M +
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 474 AGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDH 532
G+RP + TY++L++ L A+++L +M + +V + L+ + K+G +
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 533 ALRWLRFMGSSGIRTNNFIVRQLFES-CMKNALYESAKPLLETYVESAAKVDLVLYTSVL 591
A + M I N L CM + L E A+ + V D+V Y +++
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE-AQQIFTLMVSKDCLPDVVTYNTLI 387
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/381 (19%), Positives = 160/381 (41%), Gaps = 3/381 (0%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
YN +I L + +L + K++ + N L+ F + +A + + M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
+ D T+ ++ L + + A+ L + M + +P + ++++ + K G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
D ++ + +M+ +Y ++I+S K +D AL L+ EM G RP+ ++ +
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
I G+ A + +DM P T++ L++ A G++ A KL++ M +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALR 535
P + TY +L+ +D A +I M + DV + L+ + K V +
Sbjct: 342 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME 401
Query: 536 WLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLV 595
R M G+ N L + + ++A+ + + V +++ Y ++L L
Sbjct: 402 LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL- 460
Query: 596 RCQDEQNERHLMAILSATKHK 616
C++ + E+ ++ K K
Sbjct: 461 -CKNGKLEKAMVVFEYLQKSK 480
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 120/282 (42%), Gaps = 1/282 (0%)
Query: 311 MIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCG 370
++ ++AK + D I ++M+ + + +++ + + +L ++ + +M G
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130
Query: 371 HRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAM 430
+ PS SL+ + ++ A+ L D+M G++P+ FT ++ + K A+
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 431 SIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLL 490
++ M G P TY ++ G+ D A+ L N M + + Y+ ++ L
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSL 250
Query: 491 AKRKLVDVAAKILLEMKTMGYSVDV-SASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNN 549
K + VD A + EM G DV + S ++ G A R L M I N
Sbjct: 251 CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNV 310
Query: 550 FIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVL 591
L ++ K A+ L + ++ + ++V Y S++
Sbjct: 311 VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 352
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 175/397 (44%), Gaps = 39/397 (9%)
Query: 173 VINDSDTSLSLFRWAKRQSWYVPGDE-CYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNG 231
+ DTSL+L K + V D Y + D L D +SLF EM K+
Sbjct: 203 ICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 262
Query: 232 ISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFE 291
+ YN +++ L KA K K ++ + + ++NVL+ +F+ +G +A E
Sbjct: 263 VV---TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 292 IYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMG 351
+Y+ M S + TY ++ RL A + M P F SL+
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 352 KAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFG 411
R+D MKV+ + G +A Y L++ + ++GK+ A L+ EM G P+
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 412 LFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSM 471
+ ++++ +GKL+ A+ IF D++++ Y+ ++E G+V+ A L+ S+
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 472 TSAGLRPGLSTYTALLTLLAK-----------RKL------------------------V 496
G++P + TYT +++ L K RK+ +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 497 DVAAKILLEMKTMGYSVDVSASDVLMVYIKDGSVDHA 533
+AK++ EMK+ G+S D S+ +++ + G +D +
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKS 596
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 190/421 (45%), Gaps = 7/421 (1%)
Query: 178 DTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISL-FS 236
D +++LF+ R S +P + F + ++ F+ +L ++ NGI+
Sbjct: 70 DDAIALFQEMIR-SRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQL----ELNGIAHNIY 124
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
N +I + K +Y KV+ + DT ++N L+ +G +A + + M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
+ C D TY ++ + +SG A+ L ++M+ERN + +++++DS+ + G +
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
D ++ ++ EM+ G + S Y SL+ KAGK + L +M PN F ++
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
++ K GKL A ++ +M G P TY+ L++ + ++ A + + M
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDHALR 535
P + T+T+L+ K VD K+ + G + V+ S ++ + + G + A
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 536 WLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLV 595
+ M S G+ + L + N E A + E +S + +V+YT+++ +
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 596 R 596
+
Sbjct: 485 K 485
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 166/362 (45%), Gaps = 1/362 (0%)
Query: 236 SAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYES 295
+ +N +I+ L K+ + +++++ C+ D +YN ++ G A ++
Sbjct: 159 TTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRK 218
Query: 296 MEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGR 355
ME+ D TY +I SL + G +DAAI LF+EM+ + + S + SLV + KAG+
Sbjct: 219 MEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGK 278
Query: 356 LDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTM 415
+ + +M P+ + L++ + K GKL A L+ EM G PN +
Sbjct: 279 WNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNT 338
Query: 416 IIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAG 475
+++ + +L A ++ M R P T++ L++ + +VD MK++ +++ G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 476 LRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIKD-GSVDHAL 534
L TY+ L+ + + +A ++ EM + G DV +L+ + D G ++ AL
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 535 RWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHL 594
+ S + + + E K E A L + K +++ YT +++ L
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518
Query: 595 VR 596
+
Sbjct: 519 CK 520
>sp|Q9LS25|PP420_ARATH Pentatricopeptide repeat-containing protein At5g46580,
chloroplastic OS=Arabidopsis thaliana GN=At5g46580 PE=2
SV=1
Length = 711
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 124/532 (23%), Positives = 229/532 (43%), Gaps = 34/532 (6%)
Query: 206 VLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSD 265
+ E +F LSL DE+ H +++ L V+ L + K + K S
Sbjct: 133 IFTEKSEF---LSLLDEIPHPPNRDNALL------VLNSLREWQKTHTFFNWVKS--KSL 181
Query: 266 CKIDTQSYNVLMTLFLNKGLPY-KAFEIYESME----KGECSLDGSTYELMIPSLAKSGR 320
++T YNV M K L + + F++ E M K LD TY +I +
Sbjct: 182 FPMETIFYNVTM-----KSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNL 236
Query: 321 LDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVS 380
+ AI+ F+ M + P +++++D K+G+++ + +Y G +P A +
Sbjct: 237 YNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSV 296
Query: 381 LIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAG 440
L + + +AG D + EM+ +PN ++ ++E+ ++GK +A S+F +M AG
Sbjct: 297 LGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAG 356
Query: 441 FLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAA 500
P T + L++++ + A++L+ M + Y LL + A L + A
Sbjct: 357 LTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAE 416
Query: 501 KILLEMK--TMGYSVDVSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFES 558
++ +MK + S + +L +Y G + A+ M +G++ N L +
Sbjct: 417 RLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQC 476
Query: 559 CMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNERHLMAILSATKHKAH 618
K + + + ++ K D L +L+ + C+ ++ +MA L K
Sbjct: 477 LGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLERANKKLV 536
Query: 619 AFLCGLFTGPEQRKQPVLSFVREFFHGIDYELEEGAARYFVNVLLNYLVLMGQINRARCV 678
F+ + + + V+E F + + A R F N L++ + RA +
Sbjct: 537 TFVNLIVDEKTEYET-----VKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHEL 591
Query: 679 WKVAYENKLFPKAIVFDQHI-AWSLDVRNLSVGAALIAV---MHTLHRFRKR 726
+ L+P + ++ I WSLDVR+LSVGAA A+ M TL KR
Sbjct: 592 LYLGTLFGLYPG--LHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKR 641
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 163/345 (47%), Gaps = 6/345 (1%)
Query: 155 LDKLQFVPKMVHITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFD 214
LD++ P + L + + + + F W K +S + P + + ++V +S F
Sbjct: 144 LDEIPHPPNRDNALLVLNSLREWQKTHTFFNWVKSKSLF-PME---TIFYNVTMKSLRFG 199
Query: 215 GMLSLFDEMVHDSSKNGISLFS-AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSY 273
L +EM + K+G+ L + Y+ +I + + + F+++ + D +Y
Sbjct: 200 RQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTY 259
Query: 274 NVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKE 333
+ ++ ++ G + +YE D + ++ ++G D + QEMK
Sbjct: 260 SAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKS 319
Query: 334 RNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDT 393
+ +P+ ++ +L+++MG+AG+ + ++ EM G P+ +L++ Y KA
Sbjct: 320 MDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARD 379
Query: 394 ALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDM-ERAGFLPTPSTYSCLL 452
AL+LW+EM+ + +F L+ ++ A G + A +F DM E P +Y+ +L
Sbjct: 380 ALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAML 439
Query: 453 EMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVD 497
++ S G+ + AM+L+ M AG++ + T L+ L K K +D
Sbjct: 440 NIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRID 484
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 202/450 (44%), Gaps = 18/450 (4%)
Query: 112 VEPGFD-DHVMVGGIKKPFLNASAVAKIVEVVNRW-KWG-PELETQLDKLQFVPKMVHIT 168
V G++ D ++ + K F + K V V+ K+G P++ + KM I
Sbjct: 116 VRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRID 175
Query: 169 QALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSS 228
A +V++ R + P Y ++ L D L + ++++ D+
Sbjct: 176 DATRVLD-----------RMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 229 KNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYK 288
+ + Y +I+ ++ + ++L K D +YN ++ +G+ +
Sbjct: 225 QPTVI---TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 289 AFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVD 348
AFE+ ++E C D +Y +++ +L G+ + KL +M P+ ++ L+
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 349 SMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRP 408
++ + G+++ +M + M+ G P A Y LI ++ + G+LD A+ + M G P
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Query: 409 NFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLY 468
+ + ++ + K+GK D A+ IF + G P S+Y+ + SSG A+ +
Sbjct: 402 DIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Query: 469 NSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASD-VLMVYIKD 527
M S G+ P TY ++++ L + +VD A ++L++M++ + V + VL+ + K
Sbjct: 462 LEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521
Query: 528 GSVDHALRWLRFMGSSGIRTNNFIVRQLFE 557
++ A+ L M +G R N L E
Sbjct: 522 HRIEDAINVLESMVGNGCRPNETTYTVLIE 551
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 151/330 (45%), Gaps = 5/330 (1%)
Query: 280 FLNKGLPYKAFEIYESMEK-GECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRP 338
F + +P KA + E +EK G+ D Y +I K R+D A ++ M+ ++F P
Sbjct: 135 FTLRNIP-KAVRVMEILEKFGQ--PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSP 191
Query: 339 SFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLW 398
+ ++ S+ G+LD ++KV ++ +P+ Y LIE+ G +D AL+L
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251
Query: 399 DEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASS 458
DEM G +P+ + II K G +D A + ++E G P +Y+ LL +
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311
Query: 459 GQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSAS 518
G+ + KL M S P + TY+ L+T L + ++ A +L MK G + D +
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371
Query: 519 DVLM-VYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVE 577
D L+ + ++G +D A+ +L M S G + + + KN + A + E
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431
Query: 578 SAAKVDLVLYTSVLAHLVRCQDEQNERHLM 607
+ Y ++ + L D+ H++
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 149/338 (44%), Gaps = 1/338 (0%)
Query: 260 KVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSG 319
++L+ + D +YN L+ F A + + M + S D TY +MI SL G
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 320 RLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYV 379
+LD A+K+ ++ N +P+ + L+++ G +D ++K+ EM G +P Y
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 380 SLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERA 439
++I K G +D A + + + G P+ + +++ + GK + + T M
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 440 GFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVA 499
P TYS L+ G+++ AM L M GL P +Y L+ + +DVA
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 500 AKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFES 558
+ L M + G D V+ + VL K+G D AL +G G N+ +F +
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 559 CMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVR 596
+ A ++ + + D + Y S+++ L R
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 158/358 (44%), Gaps = 5/358 (1%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
AYN +I K ++++ + ++ D DT +YN+++ ++G A ++ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
C TY ++I + G +D A+KL EM R +P + +++ M K G +
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMV 279
Query: 357 DTSMKVY--MEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFT 414
D + ++ +E++GC P Y L+ + GK + +L +M PN ++
Sbjct: 280 DRAFEMVRNLELKGC--EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 415 MIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSA 474
++I + + GK++ AM++ M+ G P +Y L+ G++D A++ +M S
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 475 GLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYI-KDGSVDHA 533
G P + Y +L L K D A +I ++ +G S + S+ + + + G A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 534 LRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVL 591
L + M S+GI + + + + + A LL +V Y VL
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVL 515
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 112/235 (47%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
Y+ +I L + K+E + K + + D SY+ L+ F +G A E E+M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
C D Y ++ +L K+G+ D A+++F ++ E P+ + + ++ ++ +G
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDK 454
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
++ + +EM G P Y S+I + G +D A L +MR F P+ + ++
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIV 514
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSM 471
+ K+ +++ A+++ M G P +TY+ L+E +G AM+L N +
Sbjct: 515 LLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 97/202 (48%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
+Y+ +I + +L+++ + ++ C D +YN ++ G +A EI+ +
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
+ CS + S+Y M +L SG A+ + EM P + S++ + + G +
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMV 489
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
D + ++ ++M+ C PS Y ++ + KA +++ A+ + + M G RPN +T++
Sbjct: 490 DEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVL 549
Query: 417 IESHAKSGKLDIAMSIFTDMER 438
IE +G AM + D+ R
Sbjct: 550 IEGIGFAGYRAEAMELANDLVR 571
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 130/282 (46%), Gaps = 8/282 (2%)
Query: 288 KAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLV 347
+A E + M + D Y +I K G + AA K F EM R+ P + +++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 348 DSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFR 407
+ G + + K++ EM G P + + LI Y KAG + A R+ + M AG
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 408 PNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKL 467
PN +T +I+ K G LD A + +M + G P TY+ ++ SG ++ A+KL
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 468 YNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIK 526
+AGL TYT L+ K +D A +IL EM G + +VLM +
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 527 DGSVDHALRWLRFMGSSGIRTN----NFIVRQLFESCMKNAL 564
G ++ + L +M + GI N N +V+Q C++N L
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY---CIRNNL 612
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 130/285 (45%)
Query: 238 YNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESME 297
Y +I L + KL + F +++ DT Y L+ F +G A + + M
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH 378
Query: 298 KGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLD 357
+ + D TY +I + G + A KLF EM + P F L++ KAG +
Sbjct: 379 SRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMK 438
Query: 358 TSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMII 417
+ +V+ M G P+ Y +LI+ K G LD+A L EM G +PN + I+
Sbjct: 439 DAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 418 ESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLR 477
KSG ++ A+ + + E AG TY+ L++ + SG++D A ++ M GL+
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 478 PGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM 522
P + T+ L+ +++ K+L M G + + + + L+
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 147/329 (44%), Gaps = 3/329 (0%)
Query: 194 VPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEM 253
+P Y L D + D F EM S++ Y +I + +
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEM---HSRDITPDVLTYTAIISGFCQIGDMVE 404
Query: 254 SYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIP 313
+ F ++ + D+ ++ L+ + G AF ++ M + CS + TY +I
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 314 SLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRP 373
L K G LD+A +L EM + +P+ + S+V+ + K+G ++ ++K+ E + G
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 374 SAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIF 433
Y +L+++Y K+G++D A + EM G +P F +++ G L+ +
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 434 TDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKR 493
M G P +T++ L++ + + +A +Y M S G+ P TY L+ K
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 644
Query: 494 KLVDVAAKILLEMKTMGYSVDVSASDVLM 522
+ + A + EMK G+SV VS VL+
Sbjct: 645 RNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 153/338 (45%), Gaps = 1/338 (0%)
Query: 236 SAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYES 295
++YN VI ++ + +++ ++ + D SY+ ++ + G K +++ E
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 296 MEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGR 355
M++ + Y +I L + +L A + F EM + P ++ +L+D K G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 356 LDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTM 415
+ + K + EM P Y ++I + + G + A +L+ EM G P+ FT
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 416 IIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAG 475
+I + K+G + A + M +AG P TY+ L++ G +DSA +L + M G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 476 LRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHAL 534
L+P + TY +++ L K ++ A K++ E + G + D LM Y K G +D A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 535 RWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLL 572
L+ M G++ L + + E + LL
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 123/278 (44%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
+ +I KA ++ ++ ++ + C + +Y L+ +G A E+ M
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
K + TY ++ L KSG ++ A+KL E + + +L+D+ K+G +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
D + ++ EM G G +P+ + L+ + G L+ +L + M G PN F +
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSL 602
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
++ + L A +I+ DM G P TY L++ H + + A L+ M G
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGF 662
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD 514
+STY+ L+ KRK A ++ +M+ G + D
Sbjct: 663 SVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/306 (18%), Positives = 127/306 (41%), Gaps = 2/306 (0%)
Query: 304 DGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGK-AGRLDTSMKV 362
D +++ L G L A ++F++M S + + + K + T++ V
Sbjct: 174 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 233
Query: 363 YMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAK 422
+ E G + Y +I + G++ A L M + G+ P+ ++ ++ + +
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 423 SGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLST 482
G+LD + M+R G P Y ++ + ++ A + ++ M G+ P
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 483 YTALLTLLAKRKLVDVAAKILLEMKTMGYSVDV-SASDVLMVYIKDGSVDHALRWLRFMG 541
YT L+ KR + A+K EM + + DV + + ++ + + G + A + M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 542 SSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQ 601
G+ ++ +L K + A + +++ ++V YT+++ L + D
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 602 NERHLM 607
+ L+
Sbjct: 474 SANELL 479
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 108/275 (39%), Gaps = 42/275 (15%)
Query: 190 QSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGI--SLFSAYNRVIQYLAK 247
Q+ P Y L D L + D D +E++H+ K G+ ++F+ YN ++ L K
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSA----NELLHEMWKIGLQPNIFT-YNSIVNGLCK 503
Query: 248 ADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM----------- 296
+ +E + + + DT +Y LM + G KA EI + M
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 297 --------------EKGECSLD----------GSTYELMIPSLAKSGRLDAAIKLFQEMK 332
E GE L+ +T+ ++ L AA ++++M
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 333 ERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLD 392
R P + +LV KA + + ++ EM+G G S Y LI+ + K K
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 393 TALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLD 427
A ++D+MR G + +F ++ K + D
Sbjct: 684 EAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPD 718
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 81/202 (40%), Gaps = 3/202 (1%)
Query: 200 YVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFK 259
Y L D +S + D + EM+ + I F N ++ LE
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF---NVLMNGFCLHGMLEDGEKLLN 585
Query: 260 KVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSG 319
+L + ++N L+ + + A IY+ M DG TYE ++ K+
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 320 RLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYV 379
+ A LFQEMK + F S + ++ L+ K + + +V+ +M+ G ++
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Query: 380 SLIESYAKAGKLDTALRLWDEM 401
++ K + DT + DE+
Sbjct: 706 FFSDTKYKGKRPDTIVDPIDEI 727
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 119 bits (298), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 154/336 (45%), Gaps = 3/336 (0%)
Query: 178 DTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSA 237
+ +L+ + Q + P + L + L ++ + + D M+ + +
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY---T 332
Query: 238 YNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESME 297
YN VI L K +++ + +++ DC +T +YN L++ + +A E+ +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 298 KGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLD 357
D T+ +I L + A++LF+EM+ + P + L+DS+ G+LD
Sbjct: 393 SKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLD 452
Query: 358 TSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMII 417
++ + +M+ G S Y +LI+ + KA K A ++DEM + G N + +I
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLI 512
Query: 418 ESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLR 477
+ KS +++ A + M G P TY+ LL G + A + +MTS G
Sbjct: 513 DGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCE 572
Query: 478 PGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSV 513
P + TY L++ L K V+VA+K+L ++ G ++
Sbjct: 573 PDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 160/366 (43%), Gaps = 2/366 (0%)
Query: 236 SAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYES 295
S +N +I+ L +A +L + + + D +++ +M ++ +G A I E
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 296 MEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERN-FRPSFNIFASLVDSMGKAG 354
M + CS + +++ K GR++ A+ QEM ++ F P F +LV+ + KAG
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 355 RLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFT 414
+ ++++ M G+ P Y S+I K G++ A+ + D+M PN +
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 415 MIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSA 474
+I + K +++ A + + G LP T++ L++ + AM+L+ M S
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 475 GLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHA 533
G P TY L+ L + +D A +L +M+ G + V + L+ + K A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 534 LRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAH 593
M G+ N+ L + K+ E A L++ + K D Y S+L H
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 594 LVRCQD 599
R D
Sbjct: 550 FCRGGD 555
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 161/363 (44%), Gaps = 8/363 (2%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
+N ++ L KA ++ + +L D +YN +++ G +A E+ + M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
+CS + TY +I +L K +++ A +L + + + P F SL+ +
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
+M+++ EM+ G P Y LI+S GKLD AL + +M ++G + + +
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
I+ K+ K A IF +ME G TY+ L++ S +V+ A +L + M G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYI-KDGSVDHALR 535
+P TY +LLT + + AA I+ M + G D+ L+ + K G V+ A +
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 536 WLRFMGSSGIRTN----NFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVL 591
LR + GI N +++ LF K E+ E ++ A D V Y V
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFR---KRKTTEAINLFREMLEQNEAPPDAVSYRIVF 653
Query: 592 AHL 594
L
Sbjct: 654 RGL 656
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 179/406 (44%), Gaps = 7/406 (1%)
Query: 194 VPGDECYVMLFDVLNESRDFDGMLSLFDEMVH-DSSKNGISLFSAYNRVIQYLAKADKLE 252
VP ++ + + E D DG L + ++MV S + +S+ N ++ K ++E
Sbjct: 221 VPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSV----NVIVHGFCKEGRVE 276
Query: 253 MSYCCFKKVLDSDCKI-DTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELM 311
+ +++ + D D ++N L+ G A EI + M + D TY +
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 312 IPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGH 371
I L K G + A+++ +M R+ P+ + +L+ ++ K +++ + ++ + G
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 372 RPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMS 431
P + SLI+ A+ L++EMR G P+ + M+I+S GKLD A++
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 432 IFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLA 491
+ ME +G + TY+ L++ + + A ++++ M G+ TY L+ L
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 492 KRKLVDVAAKILLEMKTMGYSVDVSASDVLMV-YIKDGSVDHALRWLRFMGSSGIRTNNF 550
K + V+ AA+++ +M G D + L+ + + G + A ++ M S+G +
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576
Query: 551 IVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVR 596
L K E A LL + + Y V+ L R
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFR 622
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 113/252 (44%)
Query: 227 SSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLP 286
+SK + +N +IQ L ++ F+++ C+ D +YN+L+ +KG
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 287 YKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASL 346
+A + + ME C+ TY +I K+ + A ++F EM+ + + +L
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 347 VDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGF 406
+D + K+ R++ + ++ +M G +P Y SL+ + + G + A + M G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 407 RPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMK 466
P+ + +I K+G++++A + ++ G TP Y+ +++ + A+
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 467 LYNSMTSAGLRP 478
L+ M P
Sbjct: 632 LFREMLEQNEAP 643
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 129/293 (44%), Gaps = 38/293 (12%)
Query: 291 EIYESMEKGECSLDGSTYELMIPSLAKSGRLDA--------------------------- 323
+I E M+ C + ST+ ++I S A+ D
Sbjct: 104 KILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNL 163
Query: 324 -----AIKLFQ----EMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPS 374
++KL + +M +P + F L+ ++ +A +L ++ + +M G P
Sbjct: 164 LVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223
Query: 375 APMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFT 434
+ ++++ Y + G LD ALR+ ++M G + +I+ K G+++ A++
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283
Query: 435 DM-ERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKR 493
+M + GF P T++ L+ +G V A+++ + M G P + TY ++++ L K
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 494 KLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDHALRWLRFMGSSGI 545
V A ++L +M T S + V+ + ++ K+ V+ A R + S GI
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 131/295 (44%), Gaps = 4/295 (1%)
Query: 306 STYELMIPSLAKSGRLDAAIKLFQ-EMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYM 364
ST ++ SL AA++LF K+ NF P ++ ++ +G++G D K+
Sbjct: 48 STDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILE 107
Query: 365 EMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIA-GFRPNFGLFTMIIESHAKS 423
+M+ ++ LIESYA+ D L + D M G +P+ + ++
Sbjct: 108 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 167
Query: 424 GKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTY 483
L + M G P ST++ L++ + Q+ A+ + M S GL P T+
Sbjct: 168 NSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTF 227
Query: 484 TALLTLLAKRKLVDVAAKILLEMKTMGYS-VDVSASDVLMVYIKDGSVDHALRWLRFMGS 542
T ++ + +D A +I +M G S +VS + ++ + K+G V+ AL +++ M +
Sbjct: 228 TTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSN 287
Query: 543 S-GIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVR 596
G + + L K + A +++ ++ D+ Y SV++ L +
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Score = 64.7 bits (156), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 123/300 (41%), Gaps = 5/300 (1%)
Query: 308 YELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEM- 366
YE ++ L +SG D K+ ++MK + F L++S + D + V M
Sbjct: 86 YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI 145
Query: 367 QGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKL 426
G +P Y ++ L +M + G +P+ F ++I++ ++ +L
Sbjct: 146 DEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQL 205
Query: 427 DIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTAL 486
A+ + DM G +P T++ +++ + G +D A+++ M G + +
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 487 LTLLAKRKLVDVAAKILLEMKTM-GYSVDVSASDVLMVYI-KDGSVDHALRWLRFMGSSG 544
+ K V+ A + EM G+ D + L+ + K G V HA+ + M G
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 545 IRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNER 604
+ + + K + A +L+ + + V Y ++++ L C++ Q E
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL--CKENQVEE 383
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 177/376 (47%), Gaps = 7/376 (1%)
Query: 200 YVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFS-AYNRVIQYLAKADKLEMSYCCF 258
+ ++ D+L+E D L+ + + + G+S+ S + +I AK E + F
Sbjct: 95 FGLVIDMLSEDNGCD----LYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESF 150
Query: 259 KKVLDSDCKIDTQSYNVLMTLFLNKGLPYK-AFEIYESMEKGECSLDGSTYELMIPSLAK 317
++ + DC+ D +YNV++ + + + + + AF +Y M K CS + T+ +++ L K
Sbjct: 151 GRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 318 SGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPM 377
GR A K+F +M R P+ + L+ + + G D + K++ EMQ G+ P +
Sbjct: 211 KGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVA 270
Query: 378 YVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDME 437
+ +L++ + K G++ A L GF ++ +I+ ++ + A ++ +M
Sbjct: 271 HNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANML 330
Query: 438 RAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVD 497
+ P Y+ L++ + +G+++ A+KL +SM S G+ P Y A++ L R L++
Sbjct: 331 KKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLE 390
Query: 498 VAAKILLEMKTMGYSVDVSASDVLMVYI-KDGSVDHALRWLRFMGSSGIRTNNFIVRQLF 556
+ LEM D +L+ + ++G V A + SG + L
Sbjct: 391 EGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALI 450
Query: 557 ESCMKNALYESAKPLL 572
+ K+ + A+ LL
Sbjct: 451 DGLCKSGELKEARLLL 466
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 160/349 (45%), Gaps = 8/349 (2%)
Query: 204 FDVLNESRDFDGMLSLFDEMVHDSSKNGISLFS-AYNRVIQYLAKADKLEMSYCCFKKVL 262
F +L + G S +M D + GIS Y +I L + + + F ++
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQ 260
Query: 263 DSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLD 322
S D+ ++N L+ F G +AFE+ EK L Y +I L ++ R
Sbjct: 261 TSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYT 320
Query: 323 AAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLI 382
A +L+ M ++N +P ++ L+ + KAG+++ ++K+ M G P Y ++I
Sbjct: 321 QAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVI 380
Query: 383 ESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFL 442
++ G L+ L EM P+ T++I S ++G + A IFT++E++G
Sbjct: 381 KALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCS 440
Query: 443 PTPSTYSCLLEMHASSGQVDSAMKLYNSM-----TSAGLRPGLSTYTALLTLLAKRKLVD 497
P+ +T++ L++ SG++ A L + M S LR S + T++ ++
Sbjct: 441 PSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILK 500
Query: 498 VAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGSSGI 545
A + L G S D+ + +VL+ + + G +D AL+ L + G+
Sbjct: 501 -AYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 163/353 (46%), Gaps = 17/353 (4%)
Query: 193 YVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLE 252
+V G Y L D L +R + L+ M+ + K I L Y +IQ L+KA K+E
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIIL---YTILIQGLSKAGKIE 355
Query: 253 MSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMI 312
+ + DT YN ++ +GL + + M + E D T+ ++I
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 313 PSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHR 372
S+ ++G + A ++F E+++ PS F +L+D + K+G L + + +M+ R
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEV--GR 473
Query: 373 PSAPMYVSL-------IESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGK 425
P A +++ L ++ ++G + A R G P+ + ++I ++G
Sbjct: 474 P-ASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532
Query: 426 LDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTA 485
+D A+ + ++ G P TY+ L+ G+ + A KL+ + R + Y +
Sbjct: 533 IDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDD--FRHSPAVYRS 590
Query: 486 LLTLLAKRKLVDVAAKILLE-MKTMGYSVDVSASDVLMVYIKDGSVDHALRWL 537
L+T +++ V VA + ++ +K + D +A+++ + K+G + ALR L
Sbjct: 591 LMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCF-KEGETERALRRL 642
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 125/281 (44%), Gaps = 12/281 (4%)
Query: 239 NRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEK 298
NR + ++ + +Y D+ D SYNVL+ F G A ++ ++
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQL 545
Query: 299 GECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDT 358
S D TY +I L + GR + A KLF + +FR S ++ SL+ + ++
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLF--YAKDDFRHSPAVYRSLMTWSCRKRKVLV 603
Query: 359 SMKV---YMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTM 415
+ + Y++ C +A + IE K G+ + ALR E+ G +T+
Sbjct: 604 AFNLWMKYLKKISCLDDETA----NEIEQCFKEGETERALRRLIELDTRKDELTLGPYTI 659
Query: 416 IIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMK--LYNSMTS 473
+ +SG+ A+ +F+ + L TP + L+ Q+D+A++ LY +
Sbjct: 660 WLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNN 719
Query: 474 AGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD 514
L P + Y L +LL + +++ +++ M+ GY+VD
Sbjct: 720 FKLMPRVCNYL-LSSLLESTEKMEIVSQLTNRMERAGYNVD 759
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 166/371 (44%), Gaps = 6/371 (1%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
YN +I KA ++ + ++ S D +YN ++ + G +A E+ + M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVSP---DVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
+ +C D TY ++I + + + A+KL EM++R P + LV+ + K GRL
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
D ++K +M G +P+ + ++ S G+ A +L +M GF P+ F ++
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNIL 350
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
I + G L A+ I M + G P +Y+ LL ++D A++ M S G
Sbjct: 351 INFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYS-VDVSASDVLMVYIKDGSVDHALR 535
P + TY +LT L K V+ A +IL ++ + G S V ++ + V+ K G A++
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 536 WLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLV 595
L M + ++ + L + + A + + + V + S++ L
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL- 529
Query: 596 RCQDEQNERHL 606
C+ Q +R +
Sbjct: 530 -CKSRQTDRAI 539
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 125/249 (50%)
Query: 272 SYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEM 331
++N+L+ KGL +A +I E M + C + +Y ++ K ++D AI+ + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 332 KERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKL 391
R P + +++ ++ K G+++ ++++ ++ G P Y ++I+ AKAGK
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 392 DTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCL 451
A++L DEMR +P+ ++ ++ ++ GK+D A+ F + ER G P T++ +
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 452 LEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGY 511
+ S Q D A+ M + G +P ++YT L+ LA + A ++L E+ G
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Query: 512 SVDVSASDV 520
SA V
Sbjct: 586 MKKSSAEQV 594
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 117/240 (48%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
+N +I +L + L + +K+ C+ ++ SYN L+ F + +A E E M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
C D TY M+ +L K G+++ A+++ ++ + P + +++D + KAG+
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
++K+ EM+ +P Y SL+ ++ GK+D A++ + E G RPN F I
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
+ KS + D A+ M G P ++Y+ L+E A G A++L N + + GL
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 186/428 (43%), Gaps = 19/428 (4%)
Query: 119 HVMVGGIKKPFLNASAVAKIVEVVNRWKWGPELETQLDKLQFVPKMVHITQALKVINDSD 178
+VM+ G + A + + V++R P++ T L+ + + QA++V++
Sbjct: 176 NVMISG----YCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD--- 228
Query: 179 TSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAY 238
R +R + P Y +L + + L DEM + Y
Sbjct: 229 ------RMLQRDCY--PDVITYTILIEATCRDSGVGHAMKLLDEM---RDRGCTPDVVTY 277
Query: 239 NRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEK 298
N ++ + K +L+ + + S C+ + ++N+++ + G A ++ M +
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 299 GECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDT 358
S T+ ++I L + G L AI + ++M + +P+ + L+ K ++D
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 359 SMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIE 418
+++ M G P Y +++ + K GK++ A+ + +++ G P + +I+
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 419 SHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRP 478
AK+GK A+ + +M P TYS L+ + G+VD A+K ++ G+RP
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Query: 479 GLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIK-DGSVDHALRWL 537
T+ +++ L K + D A L+ M G + ++ +L+ + +G AL L
Sbjct: 518 NAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Query: 538 RFMGSSGI 545
+ + G+
Sbjct: 578 NELCNKGL 585
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 103/210 (49%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
+YN ++ K K++ + ++++ C D +YN ++T G A EI +
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
CS TY +I LAK+G+ AIKL EM+ ++ +P ++SLV + + G++
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
D ++K + E + G RP+A + S++ K+ + D A+ M G +PN +T++
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPS 446
IE A G A+ + ++ G + S
Sbjct: 561 IEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 128/325 (39%), Gaps = 41/325 (12%)
Query: 315 LAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPS 374
+ ++G L+ K + M P +L+ + G+ + K+ ++G G P
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 375 APMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFT 434
Y +I Y KAG+++ AL + D M ++ P+ + I+ S SGKL AM +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 435 DMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRK 494
M + P TY+ L+E V AMKL + M G P + TY L+ + K
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 495 LVDV-----------------------------------AAKILLEMKTMGYSVDVSASD 519
+D A K+L +M G+S V +
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 520 VLMVYI-KDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVES 578
+L+ ++ + G + A+ L M G + N+ L K + A LE V
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 579 AAKVDLVLYTSVLAHLVRCQDEQNE 603
D+V Y ++L L C+D + E
Sbjct: 409 GCYPDIVTYNTMLTAL--CKDGKVE 431
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 159/350 (45%), Gaps = 12/350 (3%)
Query: 190 QSWYVPGDECYVMLFDVLNESRDFDGM---LSLFDEMVHDSSKNGISLFSAYNRVIQYLA 246
QS+ V G C +++ +LN D + + LFDE + S N F+ R + +
Sbjct: 163 QSFEVEG--CCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 247 KADK-LEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGE-CSLD 304
KA+K LE+ + C+ D +YN L+ F KA E+++ ++ G CS D
Sbjct: 221 KAEKALEL----LGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 305 GSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYM 364
TY MI K+G++ A L +M P+ F LVD KAG + T+ ++
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 365 EMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSG 424
+M G P + SLI+ Y + G++ RLW+EM G PN ++++I +
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 425 KLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYT 484
+L A + + +P P Y+ +++ +G+V+ A + M +P T+T
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 485 ALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDHA 533
L+ + + A I +M +G S D ++ S +L +K G A
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 130/303 (42%), Gaps = 39/303 (12%)
Query: 307 TYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYM-- 364
TY L+ SL K+G D A ++F+ MK P+ + LV S + G+L + + +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 365 -EMQGCGHRPSAPM------------------------------YVSLIESYAKAGKLDT 393
E++GC ++ + + LI GK +
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 394 ALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPS--TYSCL 451
AL L M G P+ + +I+ KS +L+ A +F D+ ++G + +P TY+ +
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSM 283
Query: 452 LEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGY 511
+ + +G++ A L + M G+ P T+ L+ AK + A +I +M + G
Sbjct: 284 ISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGC 343
Query: 512 SVD-VSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFES-CMKNALYESAK 569
D V+ + ++ Y + G V R M + G+ N F L + C +N L + A+
Sbjct: 344 FPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLK-AR 402
Query: 570 PLL 572
LL
Sbjct: 403 ELL 405
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 10/267 (3%)
Query: 335 NFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLD-- 392
N R SF + L S+ KAG D + +++ M+ G P+ + L+ S+A+ GKL
Sbjct: 98 NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 393 TALRLWD-EMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCL 451
TAL L E+ N L T++ K +++ AM +F + R T++ L
Sbjct: 158 TALLLQSFEVEGCCMVVNSLLNTLV-----KLDRVEDAMKLFDEHLRFQSCNDTKTFNIL 212
Query: 452 LEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGY 511
+ G+ + A++L M+ G P + TY L+ K ++ A+++ ++K+
Sbjct: 213 IRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 512 -SVD-VSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAK 569
S D V+ + ++ Y K G + A L M GI N L + K +A+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 570 PLLETYVESAAKVDLVLYTSVLAHLVR 596
+ + D+V +TS++ R
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCR 359
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 84/216 (38%), Gaps = 9/216 (4%)
Query: 384 SYAKAGKLDT----ALRLWDEMRIA-GFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMER 438
S+ KLD R W+ R R +F + ++ S K+G D+A +F M+
Sbjct: 72 SFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKS 131
Query: 439 AGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDV 498
G P L+ A G++ A L + S + +LL L K V+
Sbjct: 132 DGVSPNNRLLGFLVSSFAEKGKLHFATALL--LQSFEVEGCCMVVNSLLNTLVKLDRVED 189
Query: 499 AAKILLEMKTMGYSVDVSASDVLMVYIKD-GSVDHALRWLRFMGSSGIRTNNFIVRQLFE 557
A K+ E D ++L+ + G + AL L M G + L +
Sbjct: 190 AMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQ 249
Query: 558 S-CMKNALYESAKPLLETYVESAAKVDLVLYTSVLA 592
C N L ++++ + S D+V YTS+++
Sbjct: 250 GFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMIS 285
Score = 38.9 bits (89), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 195 PGDECYVMLFDVL-NESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEM 253
P Y +L + L NE+R +L + + +SK+ I YN VI KA K+
Sbjct: 380 PNAFTYSILINALCNENR----LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE 435
Query: 254 SYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIP 313
+ +++ CK D ++ +L+ KG ++A I+ M CS D T ++
Sbjct: 436 ANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Query: 314 SLAKSGRLDAAIKLFQ 329
L K+G A L Q
Sbjct: 496 CLLKAGMAKEAYHLNQ 511
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 135/279 (48%), Gaps = 1/279 (0%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
+YN V+ + ++++ F +L+ K + +Y++L+ A E+ M
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEM-KERNFRPSFNIFASLVDSMGKAGR 355
++G Y+ +I L K G+ A +L M +E+ S + S++D K G
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599
Query: 356 LDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTM 415
+D+++ Y EM G G P+ Y SL+ K ++D AL + DEM+ G + + +
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGA 659
Query: 416 IIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAG 475
+I+ K ++ A ++F+++ G P+ Y+ L+ + G + +A+ LY M G
Sbjct: 660 LIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDG 719
Query: 476 LRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD 514
LR L TYT L+ L K + +A+++ EM+ +G D
Sbjct: 720 LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPD 758
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 151/331 (45%), Gaps = 8/331 (2%)
Query: 195 PGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSK-NGISLFSAYNRVIQYLAKADKLEM 253
P + Y +L D + D L + + M + + NG+ Y +I L K +
Sbjct: 511 PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV----VYQTIINGLCKVGQTSK 566
Query: 254 SYCCFKKVLDSD--CKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELM 311
+ +++ C + SYN ++ F +G A YE M S + TY +
Sbjct: 567 ARELLANMIEEKRLC-VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSL 625
Query: 312 IPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGH 371
+ L K+ R+D A+++ EMK + + + +L+D K ++++ ++ E+ G
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 372 RPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMS 431
PS P+Y SLI + G + AL L+ +M G R + G +T +I+ K G L +A
Sbjct: 686 NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASE 745
Query: 432 IFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLA 491
++T+M+ G +P Y+ ++ + GQ +K++ M + P + Y A++
Sbjct: 746 LYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805
Query: 492 KRKLVDVAAKILLEMKTMGYSVDVSASDVLM 522
+ +D A ++ EM G D + D+L+
Sbjct: 806 REGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 193/409 (47%), Gaps = 8/409 (1%)
Query: 203 LFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVL 262
L + ++ R D + + ++M+ + I F NR + L + + L + + +++
Sbjct: 169 LLNAYSKDRQTDHAVDIVNQMLE---LDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMV 225
Query: 263 DSDCKIDTQSYNVLMTLFLNKGLPYKAFEIY-ESMEKGECSLDGSTYELMIPSLAKSGRL 321
D + +LM L + P +A E+ ++E+G D Y L + + K+ L
Sbjct: 226 AIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERG-AEPDSLLYSLAVQACCKTLDL 284
Query: 322 DAAIKLFQEMKERNF-RPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVS 380
A L +EMKE+ PS + S++ + K G +D ++++ EM G + S
Sbjct: 285 AMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATS 344
Query: 381 LIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAG 440
LI + K L +AL L+D+M G PN F+++IE K+G+++ A+ + ME G
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404
Query: 441 FLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAA 500
P+ +++ + + A+KL++ GL + +L+ L K+ D A
Sbjct: 405 LTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEAT 463
Query: 501 KILLEMKTMGYSVDV-SASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESC 559
++L +M++ G +V S ++V++ + + ++D A + G++ NN+ L + C
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523
Query: 560 MKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNERHLMA 608
+N ++A ++ S +V+ V+Y +++ L + R L+A
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLA 572
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/489 (22%), Positives = 201/489 (41%), Gaps = 57/489 (11%)
Query: 110 RSVEPGFD-DHVMVGGIKKPFLNASAVAKIVEVVNRW-KWGPELETQLDKLQFVPKMVHI 167
R V G D D+V + + L A+ +EV++R + G E ++ L L
Sbjct: 223 RMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLA-------- 274
Query: 168 TQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDS 227
QA D + SL R K + VP E Y + + + D + L DEM+ D
Sbjct: 275 VQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSD- 333
Query: 228 SKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPY 287
GIS M+ ++ CK N L
Sbjct: 334 ---GIS-------------------MNVVAATSLITGHCK--------------NNDL-V 356
Query: 288 KAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLV 347
A +++ MEK S + T+ ++I K+G ++ A++ +++M+ PS +++
Sbjct: 357 SALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII 416
Query: 348 DSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYV--SLIESYAKAGKLDTALRLWDEMRIAG 405
K + + ++K++ E G A ++V +++ K GK D A L +M G
Sbjct: 417 QGWLKGQKHEEALKLFDESFETGL---ANVFVCNTILSWLCKQGKTDEATELLSKMESRG 473
Query: 406 FRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAM 465
PN + ++ H + +D+A +F+++ G P TYS L++ + +A+
Sbjct: 474 IGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNAL 533
Query: 466 KLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKIL---LEMKTMGYSVDVSASDVLM 522
++ N MTS+ + Y ++ L K A ++L +E K + S +S + ++
Sbjct: 534 EVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSC-MSYNSIID 592
Query: 523 VYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKV 582
+ K+G +D A+ M +GI N L KN + A + + K+
Sbjct: 593 GFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKL 652
Query: 583 DLVLYTSVL 591
D+ Y +++
Sbjct: 653 DIPAYGALI 661
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 144/298 (48%), Gaps = 1/298 (0%)
Query: 239 NRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEK 298
N ++ L +A KL+ ++ K++L C +D SYN L++ K +AF + M K
Sbjct: 522 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 581
Query: 299 GECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDT 358
D TY ++I L +++ AI+ + + K P ++ ++D KA R +
Sbjct: 582 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 641
Query: 359 SMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIE 418
+ + EM +P+ +Y LI +Y ++G+L AL L ++M+ G PN +T +I+
Sbjct: 642 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 701
Query: 419 SHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRP 478
+ +++ A +F +M G P Y+ L++ + GQ+ L M S + P
Sbjct: 702 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 761
Query: 479 GLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVD-VSASDVLMVYIKDGSVDHALR 535
TYT ++ A+ V A+++L EM+ G D ++ + + Y+K G V A +
Sbjct: 762 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 165/365 (45%), Gaps = 19/365 (5%)
Query: 274 NVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKE 333
N+L+T + K E ++ + KG S D + I + K G+++ A+KLF +M+E
Sbjct: 243 NILLTSLVRANEFQKCCEAFDVVCKG-VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEE 301
Query: 334 RNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDT 393
P+ F +++D +G GR D + +M G P+ Y L++ +A ++
Sbjct: 302 AGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGD 361
Query: 394 ALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLE 453
A + EM GF PN ++ +I+S ++G L+ A+ I M G T STY+ L++
Sbjct: 362 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 421
Query: 454 MHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSV 513
+ +GQ D+A +L M S G ++T+++ LL + D A + + EM S
Sbjct: 422 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 481
Query: 514 DVSASDVLMVYI-KDGSVDHALR-WLRFMGSSGI---RTNNFIVRQLFESCMKNALYESA 568
L+ + K G AL W +F+ + RT+N ++ L E+ + +
Sbjct: 482 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQ 541
Query: 569 KPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNERHLMAI-------LSATKHKAHAFL 621
K +L +D V Y ++++ C ++ + M + L + +
Sbjct: 542 KEIL----GRGCVMDRVSYNTLISGC--CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 595
Query: 622 CGLFT 626
CGLF
Sbjct: 596 CGLFN 600
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 158/352 (44%), Gaps = 4/352 (1%)
Query: 213 FDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQS 272
FD L EM+ + G L + +I L K K + + + L+ +DT++
Sbjct: 464 FDSALRFVGEMLLRNMSPGGGLLTT---LISGLCKHGKHSKALELWFQFLNKGFVVDTRT 520
Query: 273 YNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMK 332
N L+ G +AF I + + C +D +Y +I +LD A EM
Sbjct: 521 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 580
Query: 333 ERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLD 392
+R +P ++ L+ + +++ +++ + + + G P Y +I+ KA + +
Sbjct: 581 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 640
Query: 393 TALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLL 452
+DEM +PN ++ +I ++ +SG+L +A+ + DM+ G P +TY+ L+
Sbjct: 641 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700
Query: 453 EMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMG-Y 511
+ + +V+ A L+ M GL P + YTAL+ K + +L EM + +
Sbjct: 701 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 760
Query: 512 SVDVSASDVLMVYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNA 563
++ + ++ Y +DG+V A R L M GI ++ ++ +K
Sbjct: 761 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 812
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 239 NRVIQYLAKADKLEMSYCCFKKVLDSDCK---IDTQSYNVLMTLFLNKGLPYKAFEIYES 295
N ++ L +A+ E CC + D CK D + + F G +A +++
Sbjct: 243 NILLTSLVRAN--EFQKCC--EAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK 298
Query: 296 MEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGR 355
ME+ + + T+ +I L GR D A ++M ER P+ ++ LV + +A R
Sbjct: 299 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 358
Query: 356 LDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTM 415
+ + V EM G P+ +Y +LI+S+ +AG L+ A+ + D M G +
Sbjct: 359 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 418
Query: 416 IIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAG 475
+I+ + K+G+ D A + +M GF +++ ++ + S DSA++ M
Sbjct: 419 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 478
Query: 476 LRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYIKD-GSVDHAL 534
+ PG T L++ L K A ++ + G+ VD S+ L+ + + G +D A
Sbjct: 479 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 538
Query: 535 RWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHL 594
R + + G + L C + A L+ V+ K D Y+ ++ L
Sbjct: 539 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 598
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 146/356 (41%), Gaps = 1/356 (0%)
Query: 237 AYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESM 296
Y+ +++ L +A ++ +Y K++ + YN L+ F+ G KA EI + M
Sbjct: 345 TYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM 404
Query: 297 EKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRL 356
SL STY +I K+G+ D A +L +EM F + F S++ +
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464
Query: 357 DTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMI 416
D++++ EM P + +LI K GK AL LW + GF + +
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524
Query: 417 IESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGL 476
+ ++GKLD A I ++ G + +Y+ L+ ++D A + M GL
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584
Query: 477 RPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALR 535
+P TY+ L+ L V+ A + + K G DV V++ K +
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644
Query: 536 WLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESAAKVDLVLYTSVL 591
+ M S ++ N + L + ++ A L E + YTS++
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 137/314 (43%), Gaps = 5/314 (1%)
Query: 200 YVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSA-YNRVIQYLAKADKLEMSYCCF 258
Y L D E+ + + + D MV G+SL S+ YN +I+ K + + +
Sbjct: 381 YNNLIDSFIEAGSLNKAIEIKDLMV----SKGLSLTSSTYNTLIKGYCKNGQADNAERLL 436
Query: 259 KKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKS 318
K++L ++ S+ ++ L + + A M S G +I L K
Sbjct: 437 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 496
Query: 319 GRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMY 378
G+ A++L+ + + F +L+ + +AG+LD + ++ E+ G G Y
Sbjct: 497 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 556
Query: 379 VSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMER 438
+LI KLD A DEM G +P+ ++++I K++ A+ + D +R
Sbjct: 557 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 616
Query: 439 AGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDV 498
G LP TYS +++ + + + + ++ M S ++P Y L+ + + +
Sbjct: 617 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 676
Query: 499 AAKILLEMKTMGYS 512
A ++ +MK G S
Sbjct: 677 ALELREDMKHKGIS 690
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 83/216 (38%), Gaps = 36/216 (16%)
Query: 226 DSSKNG-ISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKG 284
D +NG + Y+ +I KA++ E F +++ + + +T YN L+ + G
Sbjct: 613 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 672
Query: 285 LPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMK------------ 332
A E+ E M+ S + +TY +I ++ R++ A LF+EM+
Sbjct: 673 RLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYT 732
Query: 333 -----------------------ERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGC 369
+N P+ + ++ + G + + ++ EM+
Sbjct: 733 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792
Query: 370 GHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAG 405
G P + Y I Y K G + A + DE A
Sbjct: 793 GIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAA 828
>sp|Q9SVH3|PP328_ARATH Pentatricopeptide repeat-containing protein At4g20740
OS=Arabidopsis thaliana GN=At4g20740 PE=3 SV=1
Length = 727
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 162/362 (44%), Gaps = 41/362 (11%)
Query: 143 NRWKWGPELETQLDKLQFVPKMVHITQALKVINDSDTSLSLFRWAKRQSWYVPGDECYVM 202
NR WGP + ++L+KL+ V + + + LK+ ND+ + F WA +Q Y
Sbjct: 105 NRNHWGPSVVSELNKLRRVTPSI-VAEVLKLGNDAAVAAKFFHWAGKQKGY--------- 154
Query: 203 LFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVL 262
DF + ++ + ++NG + AD+L +++
Sbjct: 155 -------KHDF----AAYNAFAYCLNRNG------------HFRAADQL-------PELM 184
Query: 263 DSDCKIDTQ-SYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRL 321
DS + ++ + +L+ + + + + +YE M+K Y ++ +L K+G
Sbjct: 185 DSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYF 244
Query: 322 DAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSL 381
D A+ ++++ KE F LV + KAGR++ +++ M+ +P Y ++
Sbjct: 245 DLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAM 304
Query: 382 IESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGF 441
I++ G LD +LR+WDEMR +P+ + ++ K G+++ +F +M+
Sbjct: 305 IKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQI 364
Query: 442 LPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAK 501
L Y L+E + G+V SA L+ + +G + Y A++ L VD A K
Sbjct: 365 LIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYK 424
Query: 502 IL 503
+
Sbjct: 425 LF 426
Score = 80.1 bits (196), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 166/412 (40%), Gaps = 18/412 (4%)
Query: 189 RQSWYVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKA 248
R++ P Y + L + D L ++DEM D K + AY ++ L K
Sbjct: 290 RENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM---AYGTLVVGLCKD 346
Query: 249 DKLEMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTY 308
++E Y F ++ ID + Y VL+ F+ G A ++E + D Y
Sbjct: 347 GRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIY 406
Query: 309 ELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQG 368
+I L ++D A KLFQ E P F + ++ + RL V +
Sbjct: 407 NAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGE 466
Query: 369 CGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDI 428
G+ S + A K AL ++ ++ G + ++ +++E+ K G +
Sbjct: 467 LGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQK 525
Query: 429 AMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLT 488
++S+F +M + GF P S+YS + G V +A + + P ++ Y +L
Sbjct: 526 SLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTK 585
Query: 489 LLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVY-------IKDGSVDHALRWLRFMG 541
L ++ ++ A +LL + +G +V + + Y K + + ++ + M
Sbjct: 586 GLC--QIGEIDAVMLLVRECLG---NVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMN 640
Query: 542 SSGIRTNNFIVRQLFESCMKNALYESAKPLLETYVESA--AKVDLVLYTSVL 591
G+ N I + K+ + A+ + + + D+V+Y +L
Sbjct: 641 QEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTEADMVVYEEML 692
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 165/385 (42%), Gaps = 4/385 (1%)
Query: 213 FDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQS 272
FD SLF EM+ I F+ RV+ +AK +K ++ + K+ + D S
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFT---RVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 273 YNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMK 332
+ +L+ F A + M K T ++ + R A+ L M
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD 176
Query: 333 ERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLD 392
F P+ I+ ++++ + K L+ +++V+ M+ G R A Y +LI + +G+
Sbjct: 177 GFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWT 236
Query: 393 TALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLL 452
A RL +M PN FT +I++ K G L A +++ +M R +P TY+ L+
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLI 296
Query: 453 EMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYS 512
G + A +++ M S G P + TY L+T K K V+ K+ EM G
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 513 VDVSASDVLM-VYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPL 571
D + L+ Y + G ++ A + M G+ + L + N E A +
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 416
Query: 572 LETYVESAAKVDLVLYTSVLAHLVR 596
+E +S VD++ Y ++ L R
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCR 441
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 9/321 (2%)
Query: 289 AFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVD 348
A E++ MEK D TY +I L+ SGR A +L ++M +R P+ F +L+D
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 349 SMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRP 408
+ K G L + +Y EM P+ Y SLI + G L A ++D M G P
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 409 NFGLFTMIIESHAKSGKLDIAMSIFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLY 468
+ + +I KS +++ M +F +M G + TY+ L+ + +G+++ A K++
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 469 NSMTSAGLRPGLSTYTALLTLLAKRKLVDVAAKILLEMKTMGYSVDVSASDVLMVYI-KD 527
N M G+ P + TY LL L ++ A ++ +++ VD+ ++++ + +
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 528 GSVDHALRWLRFMGSSGIRTNNFIVRQLFESCMKNALYESAKPLL-----ETYVESAAKV 582
+ A R + G++ + + + L A L + ++ S
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Query: 583 DLVL---YTSVLAHLVRCQDE 600
D L YTS+ A L++ E
Sbjct: 503 DETLRDHYTSLSAELIKAAHE 523
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 149/320 (46%), Gaps = 5/320 (1%)
Query: 193 YVPGDECYVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFS-AYNRVIQYLAKADKL 251
+VP Y + + L ++RD + L +F M K GI + YN +I L+ + +
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCM----EKKGIRADAVTYNTLISGLSNSGRW 235
Query: 252 EMSYCCFKKVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELM 311
+ + ++ + + L+ F+ +G +A +Y+ M + + TY +
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 312 IPSLAKSGRLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGH 371
I G L A +F M + P + +L+ K+ R++ MK++ EM G
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 372 RPSAPMYVSLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMS 431
A Y +LI Y +AGKL+ A ++++ M G P+ + ++++ +GK++ A+
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 432 IFTDMERAGFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLA 491
+ D++++ TY+ +++ + ++ A L+ S+T G++P Y +++ L
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Query: 492 KRKLVDVAAKILLEMKTMGY 511
++ L A K+ MK G+
Sbjct: 476 RKGLQREADKLCRRMKEDGF 495
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 141/348 (40%), Gaps = 7/348 (2%)
Query: 143 NRWKWGPELETQLDKLQFVPKMV---HITQALKVINDSDTSLSLFRWAKRQSWYVPGDEC 199
NR++ L +D FVP +V + L D + +L +F +++
Sbjct: 163 NRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT- 221
Query: 200 YVMLFDVLNESRDFDGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFK 259
Y L L+ S + L +MV + F+A +I K L + +K
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA---LIDTFVKEGNLLEARNLYK 278
Query: 260 KVLDSDCKIDTQSYNVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSG 319
+++ + +YN L+ F G A +++ M C D TY +I KS
Sbjct: 279 EMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK 338
Query: 320 RLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYV 379
R++ +KLF EM + + +L+ +AG+L+ + KV+ M CG P Y
Sbjct: 339 RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN 398
Query: 380 SLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERA 439
L++ GK++ AL + ++++ + + + +II+ ++ KL A +F + R
Sbjct: 399 ILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 458
Query: 440 GFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALL 487
G P Y ++ G A KL M G P Y L
Sbjct: 459 GVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 151/359 (42%), Gaps = 7/359 (1%)
Query: 320 RLDAAIKLFQEMKERNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYV 379
+ D A LF EM + PS F ++ + K + D + +Y +M+ G +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 380 SLIESYAKAGKLDTALRLWDEMRIAGFRPNFGLFTMIIESHAKSGKLDIAMSIFTDMERA 439
LI + + +L AL L +M GFRP+ ++ + + A+S+ M+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 440 GFLPTPSTYSCLLEMHASSGQVDSAMKLYNSMTSAGLRPGLSTYTALLTLLAKRKLVDVA 499
GF+P Y+ ++ + +++A++++ M G+R TY L++ L+ A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 500 AKILLEMKTMGYSVDVSASDVLM-VYIKDGSVDHALRWLRFMGSSGIRTNNFIVRQLFES 558
A++L +M +V L+ ++K+G++ A + M + N F L
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 559 CMKNALYESAKPLLETYVESAAKVDLVLYTSVLAHLVRCQDEQNERHLMAILSATKHKAH 618
+ AK + + V D+V Y +++ + + ++ L ++
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Query: 619 AFLCG-LFTGPEQRKQPVLSFVREFFHG-IDYELEEGAARYFVNVLLNYLVLMGQINRA 675
AF L G Q + L+ ++ F+ +D + Y N+LL+ L G+I +A
Sbjct: 359 AFTYNTLIHGYCQAGK--LNVAQKVFNRMVDCGVSPDIVTY--NILLDCLCNNGKIEKA 413
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 39/210 (18%)
Query: 214 DGMLSLFDEMVHDSSKNGISLFSAYNRVIQYLAKADKLEMSYCCFKKVLDSDCKIDTQSY 273
DGM LF EM + + + YN +I +A KL ++ F +++D D +Y
Sbjct: 342 DGM-KLFCEMTY---QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
Query: 274 NVLMTLFLNKGLPYKAFEIYESMEKGECSLDGSTYELMIPSLAKSGRLDAAIKLFQEMKE 333
N+L+ N G KA + E ++K E +D TY ++I L ++ +L A LF+ +
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTR 457
Query: 334 RNFRPSFNIFASLVDSMGKAGRLDTSMKVYMEMQGCGHRPSAPMYVSLIESYAKAGKLDT 393
+ G +P A Y+++I + G
Sbjct: 458 K-----------------------------------GVKPDAIAYITMISGLCRKGLQRE 482
Query: 394 ALRLWDEMRIAGFRPNFGLFTMIIESHAKS 423
A +L M+ GF P+ ++ + H S
Sbjct: 483 ADKLCRRMKEDGFMPSERIYDETLRDHYTS 512
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 296,585,031
Number of Sequences: 539616
Number of extensions: 12262585
Number of successful extensions: 33613
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 390
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 26923
Number of HSP's gapped (non-prelim): 2420
length of query: 827
length of database: 191,569,459
effective HSP length: 126
effective length of query: 701
effective length of database: 123,577,843
effective search space: 86628067943
effective search space used: 86628067943
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)