Your job contains 1 sequence.
>003360
MGGNVLQSVYHETKQVTSACWACPIGSKVAVGYSNGEILIWGVPSILNLKTEECGTQITP
ICKLNLGYKLDKIPISSLKWVYADGKASRLYIMGASDFVSMNLLQIVLLNEQTESRTTKL
ALPLSEPCIDMEIISSSSDPNKPKQDSFLLLGKSGHFYAFDDCQIERYLLQYQSRSPPSA
PKEVMLKMPFLDSSITAMKLITGNSFILSSADEDYSLLAKSVPPLLDFETKLKDGSQSHS
KVKNLFITGHSDGAINFWDVSCPLFLLILSLKQQSEKDFSLSGIPLTALYYDGTSRVLVS
GDQSGMVRIFKLKYEPHAIENSFLSFTGSKKGNSHIIHSVKVMKINGSIISLNMNRNSQH
LAVGSDQGYVYLLDTEGPTVLYQKHIASDISSGIVSLQFETCSLQGFEKNFLVIATKDSS
VLVLDSDNGNMLSTNLIHPKKPSRALFMQILNGQDGLARGANLSNVAGMNKGSPKENAVP
KQWFVLLCSEKAACAYSLSHAVQGVKKVLYKKKFHSSSCCWASTFYSGSDVGLMLLFTSG
KFEIRSLPELSLLKETSIRGFVYLTPKPNSLSNTLMCSSWDGELIMVNGNQEAFFISALR
QRDFFRFLDSACQVYSYDPTLLQEGVVSASIVQTEKKKGIFGSVLKGNKTKQAPDVEREE
TWEIIEELATIFSTANFQCDSENTVNLDLEEDEDLLNIDDIDLDGIREKPKEQSMLAVMN
KQILSSKLQAFKGKWKQMKGKNEKNNMKEEQQDEKTGAVDQIKKKYGFSHSGEPSVAKMA
ESKLHENSKKLQGINLKTTEMQDTARSFSSMAKEVLRIAEHDKKSS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003360
(826 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2169672 - symbol:AT5G05570 "AT5G05570" species... 221 3.1e-33 3
>TAIR|locus:2169672 [details] [associations]
symbol:AT5G05570 "AT5G05570" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0032259
"methylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001388
InterPro:IPR001680 InterPro:IPR002052 InterPro:IPR015943
Pfam:PF00957 PROSITE:PS00092 PROSITE:PS50892 SMART:SM00320
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0003676
GO:GO:0008168 EMBL:AB005241 eggNOG:NOG289584 KO:K08518
IPI:IPI00524362 RefSeq:NP_196176.1 UniGene:At.32982
ProteinModelPortal:Q9FFF8 SMR:Q9FFF8 PaxDb:Q9FFF8 PRIDE:Q9FFF8
EnsemblPlants:AT5G05570.1 GeneID:830440 KEGG:ath:AT5G05570
TAIR:At5g05570 HOGENOM:HOG000084374 InParanoid:Q9FFF8 OMA:ENEIQVW
PhylomeDB:Q9FFF8 ProtClustDB:CLSN2720721 Genevestigator:Q9FFF8
Uniprot:Q9FFF8
Length = 1124
Score = 221 (82.9 bits), Expect = 3.1e-33, Sum P(3) = 3.1e-33
Identities = 115/470 (24%), Positives = 203/470 (43%)
Query: 6 LQSVYHETKQVTSACWACPIGSKVAVGYSNGEILIWGVPSILNLKTEECGTQITPICKLN 65
L ++ + K+++S CWA GS +AVGY +G+IL W + + G + KL
Sbjct: 248 LSNLELDGKEISSLCWASTDGSVLAVGYVDGDILFW------DFSDGQKGKPSNHVVKLQ 301
Query: 66 LGYKLDKIPISSLKW---VYADGKASRLYIMGASDFVSMNLLQIVLLNEQTESRTTKLA- 121
L ++P+ + W V +L+I G S +L ++ L+ + K
Sbjct: 302 LSSAEKRLPVIVMHWCLDVSRKSSGGKLFIYGGDIIGSDEVLTMLGLDWSSGMGGLKCVG 361
Query: 122 ---LPLSEPCIDMEIISSSSDPNKPKQDSFLLLGKSGHFYAFDDCQIERYLLQYQSRSPP 178
L LS DM ++S + + FLL G A+DD + + Q +++
Sbjct: 362 RADLTLSGSFADM-VLSPIASSRQSGVFLFLLTNP-GQLQAYDDTSLASLMSQKENKISV 419
Query: 179 SAPKEVMLKMPFLDSSITAMKLITGN-SFILSSADEDYSLLAKSVPPLL----DFETKLK 233
S P + +P +D +T N + S A + L AK+ P + L
Sbjct: 420 S-PLPYPMVVPTMDPHMTVATFSALNVNDKTSLALSEIVLAAKARTPRTPSGESAQWPLT 478
Query: 234 DGSQSHS---KVKNLFITGHSDGAINFWDVSCPLFLLILSLKQQSEKDFSLSGIP--LTA 288
G SH K++ L++ G+ DG++ WD + P LI L+ ++ ++G+ +TA
Sbjct: 479 GGVPSHVDDYKLERLYMAGYQDGSMRIWDATYPCLSLIYILEPKASV-IDITGVDASVTA 537
Query: 289 LYYDGTSRVLVSGDQSGMVRIFKLKYEPHAIENSFLSFTGSKKGNSHIIHSVKVMKINGS 348
+ + L G++ GMVR++KL H + T ++K I+ ++ +
Sbjct: 538 FCFCSKTSCLAVGNECGMVRLYKLV--GHTSGGTLEVVTNTEKKGLAIVTTLTLW----- 590
Query: 349 IISLNMNRNSQHLAVGSDQGYVYLLDTEGPTVLYQKHIASDISSGIVSLQFETCSLQGFE 408
I ++ H AVGS +L +GP L S +SS + +LQF +Q
Sbjct: 591 -ICYALS----H-AVGSLLVAHHLHQEDGPQWLAA---FSFLSSPVCTLQF----VQSTR 637
Query: 409 KNFLVIATKDSSVLVLDSDNGNMLS-TNLIHPK-KPSRALFMQILNGQDG 456
+ L + K V VLD ++L TN + P ++L+++ + G
Sbjct: 638 R--LAVGFKCGKVAVLDIGVPSVLFVTNSLSDSGSPIKSLYVKSSSAPTG 685
Score = 147 (56.8 bits), Expect = 3.1e-33, Sum P(3) = 3.1e-33
Identities = 49/178 (27%), Positives = 83/178 (46%)
Query: 486 LLCSEKAACAYSLSHAVQGVKKVLYKKKFHSSSCCWASTFYS-GSDVGLMLLFTSGKFEI 544
L+CSE A Y++ QG + + + CCW G + ++L + +G EI
Sbjct: 804 LMCSEDALRLYTVKSLSQGSLESIMEVNL-PRPCCWMGILKKDGRECAVLLFYRTGHIEI 862
Query: 545 RSLPELSLLKETSIRGFVYLTPKPNSLSNTLMCSSWDGELIMVNGNQEAFFISALRQRDF 604
RS P L ++ E+S+ + KPN + T+ CS G +++VNG + A +S L +
Sbjct: 863 RSFPNLEVVGESSLLSLLRWNFKPN-MEKTV-CSDDFGHVVLVNGCEVAI-LSFLAHANG 919
Query: 605 FRFLDSACQVYSYDPTLLQEGVVSASIVQTEKKK--G---IFGSVLKG--NKTKQAPD 655
FR +S ++ D L + S + KK G +++KG + T+Q D
Sbjct: 920 FRLPESLPLLH--DKVLAAAADATFSHISVHKKNHDGAPKFLSNIIKGFRSSTEQKMD 975
Score = 135 (52.6 bits), Expect = 3.1e-33, Sum P(3) = 3.1e-33
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 756 TGAVDQIKKKYGFSHSGEPS-VAKMAESKLHENSKKLQGINLKTTEMQDTARSFSSMAKE 814
T VD+IK KY +GE S +A A+ KLHE +KL+ I+ +T E+QD A +F+SMA E
Sbjct: 1054 TRTVDEIKSKY--RKAGETSAIASQAKDKLHERGEKLERISQRTAELQDNAENFASMAHE 1111
Query: 815 VLRIAEHDK 823
+ + E K
Sbjct: 1112 LAKQMEKRK 1120
Score = 93 (37.8 bits), Expect = 3.2e-20, Sum P(4) = 3.2e-20
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 345 INGSIISLNMNRNSQHLAVGSDQGYVYLLDTEGPTVLYQKHIASDISSGIVSLQFETCSL 404
++ + +L ++++ LAVG G V +LD P+VL+ + SD S I SL ++ S
Sbjct: 623 LSSPVCTLQFVQSTRRLAVGFKCGKVAVLDIGVPSVLFVTNSLSDSGSPIKSLYVKSSSA 682
Query: 405 Q-------------GFEKNFLVIA-TKDSSVLVLDSDNGNMLSTNLIHPKKPSRALFMQI 450
E + L+ A TKD ++LD + G +L++ L P K A+ M I
Sbjct: 683 PTGSKSDPTDHNSINSEDDLLLCAMTKDGQTILLDGNTGKILASCL-RPLKNPTAICMHI 741
Query: 451 L 451
+
Sbjct: 742 I 742
Score = 53 (23.7 bits), Expect = 1.6e-23, Sum P(3) = 1.6e-23
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 569 NSLSNTLMCS-SWDGELIMVNGNQEAFFISALR 600
NS + L+C+ + DG+ I+++GN S LR
Sbjct: 697 NSEDDLLLCAMTKDGQTILLDGNTGKILASCLR 729
Score = 50 (22.7 bits), Expect = 3.2e-20, Sum P(4) = 3.2e-20
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 23 CPIGSKVAVGYSNGEILIWGVPS---ILNLKTEECGTQITPIC-KLNLGY------KLDK 72
C G+++ + +SNG + +W +L ++ + + L + +LD
Sbjct: 196 CSKGTRLLIAFSNGLLFLWDASEDHVVLVRGNKDLPVEGKTVADSLEASHDELSNLELDG 255
Query: 73 IPISSLKWVYADGKASRL-YIMG 94
ISSL W DG + Y+ G
Sbjct: 256 KEISSLCWASTDGSVLAVGYVDG 278
Score = 46 (21.3 bits), Expect = 8.2e-20, Sum P(4) = 8.2e-20
Identities = 20/76 (26%), Positives = 33/76 (43%)
Query: 176 SPPSAPKEVMLKMPFLDSSITAMKLITGNSFI-LSSADEDYSLLAKSVPPL-LDFETKLK 233
SP P +L P S T + + N + L A ED+ +L + L ++ +T
Sbjct: 182 SPIDYPVVGLLSQPC--SKGTRLLIAFSNGLLFLWDASEDHVVLVRGNKDLPVEGKTVAD 239
Query: 234 DGSQSHSKVKNLFITG 249
SH ++ NL + G
Sbjct: 240 SLEASHDELSNLELDG 255
Score = 43 (20.2 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 38/173 (21%), Positives = 73/173 (42%)
Query: 269 LSLKQQSEKDFSLSGIPLTALYYDGTSRVLVSGDQSGMVRIFKLKY-EPHAIENSFLSFT 327
L L+Q + S I A+ + GT + V GD+ GMV + E ++ + T
Sbjct: 114 LDLRQPASSLKWESNITAFAILH-GTGYMYV-GDEYGMVSVLNYSADEGKLLQLPYYVPT 171
Query: 328 GSKKGNSHIIHSVKVMKINGSIISLNMNRNSQHLAVGSDQGYVYLLD-TEGPTVLYQKHI 386
+ + + + + ++S ++ ++ L + G ++L D +E VL + +
Sbjct: 172 DALSEAAGLSSPIDYPVVG--LLSQPCSKGTR-LLIAFSNGLLFLWDASEDHVVLVRGNK 228
Query: 387 ASDISSGIV--SLQ-----FETCSLQGFEKNFLVIATKDSSVLVLDSDNGNML 432
+ V SL+ L G E + L A+ D SVL + +G++L
Sbjct: 229 DLPVEGKTVADSLEASHDELSNLELDGKEISSLCWASTDGSVLAVGYVDGDIL 281
Score = 41 (19.5 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 517 SSCCWASTFYSGSDVG 532
SS CWAST S VG
Sbjct: 259 SSLCWASTDGSVLAVG 274
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 826 776 0.00093 121 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 625 (66 KB)
Total size of DFA: 371 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 62.61u 0.13s 62.74t Elapsed: 00:00:03
Total cpu time: 62.61u 0.13s 62.74t Elapsed: 00:00:03
Start: Tue May 21 00:05:07 2013 End: Tue May 21 00:05:10 2013