BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003361
(826 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49756|RBM25_HUMAN RNA-binding protein 25 OS=Homo sapiens GN=RBM25 PE=1 SV=3
Length = 843
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 72/104 (69%)
Query: 718 KQLIDMIPKTKEELFSYEINWAVYDKHELHERMRPWISKKITEFLGEEETTLVDYIVSST 777
K LI+ IP K ELF+Y ++W++ D + R+RPWI+KKI E++GEEE TLVD++ S
Sbjct: 739 KSLIEKIPTAKPELFAYPLDWSIVDSILMERRIRPWINKKIIEYIGEEEATLVDFVCSKV 798
Query: 778 QDHVKASQMLELLQTILDDEAEMFVLKMWRMLIFEIKKVETGLA 821
H +L+ + +LD+EAE+F++KMWR+LI+E + + GL
Sbjct: 799 MAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLV 842
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 67/139 (48%), Gaps = 23/139 (16%)
Query: 102 IPGVRPIMPPVVRPVPLPTVTPAEK---------------------PQTKVYVGKIAPTA 140
IP IM P V +PTV+ K P T V+VG I+ A
Sbjct: 40 IPVPMSIMAPAPT-VLVPTVSMVGKHLGARKDHPGLKAKENDENCGPTTTVFVGNISEKA 98
Query: 141 DSDFVLSVLKVCGTVKSWKRAQYPSNGTPKGFGFCEFESAEGVLRALRLLNKFNIDGQEL 200
+ +L CG V SWKR Q S G + FGFCE++ E LRALRLL+ I ++L
Sbjct: 99 SDMLIRQLLAKCGLVLSWKRVQGAS-GKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKL 157
Query: 201 MLKVDQATREYLERYVDKK 219
++KVD T+ L+ + KK
Sbjct: 158 LVKVDAKTKAQLDEWKAKK 176
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 85/195 (43%), Gaps = 29/195 (14%)
Query: 127 PQTKVYVGKIAPTADSDFVLSVLKVCGTVKSWKRAQYPSNGTPKGFGFCEFESAEGVLRA 186
P T V+VG I+ A + +L CG V SWKR Q S G + FGFCE++ E LRA
Sbjct: 85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGAS-GKLQAFGFCEYKEPESTLRA 143
Query: 187 LRLLNKFNIDGQELMLKVDQATREYLERYVDKKTENTKKLKETQDAGAGKEDESVQSVEK 246
LRLL+ I ++L++KVD T+ L+ + KK + + E+V
Sbjct: 144 LRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKK----------KASNGNARPETV----- 188
Query: 247 NEPTKSPENLKDNETGNKESHDPTNFGVVTEE--------DRKADQEALEKLTCMVEERL 298
T E D ET ++ V+ E +++D +K E+
Sbjct: 189 ---TNDDEEALDEETKRRDQMIKGAIEVLIREYSSELNAPSQESDSHPRKKKKEKKEDIF 245
Query: 299 KTNPLPP--PPPQTT 311
+ P+ P P P T
Sbjct: 246 RRFPVAPLIPYPLIT 260
>sp|B2RY56|RBM25_MOUSE RNA-binding protein 25 OS=Mus musculus GN=Rbm25 PE=1 SV=2
Length = 838
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 72/104 (69%)
Query: 718 KQLIDMIPKTKEELFSYEINWAVYDKHELHERMRPWISKKITEFLGEEETTLVDYIVSST 777
K LI+ IP K ELF+Y ++W++ D + R+RPWI+KKI E++GEEE TLVD++ S
Sbjct: 734 KSLIEKIPTAKPELFAYPLDWSIVDSILMERRIRPWINKKIIEYIGEEEATLVDFVCSKV 793
Query: 778 QDHVKASQMLELLQTILDDEAEMFVLKMWRMLIFEIKKVETGLA 821
H +L+ + +LD+EAE+F++KMWR+LI+E + + GL
Sbjct: 794 MAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLV 837
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 102 IPGVRPIMPPVVRPVPLPTVTPAEK---------------------PQTKVYVGKIAPTA 140
IP IM P V +PTV+ K P T V+VG I+ A
Sbjct: 40 IPVPMSIMAPAPT-VLVPTVSMVGKHLGARKDHPGLKLKENDENCGPTTTVFVGNISEKA 98
Query: 141 DSDFVLSVLKVCGTVKSWKRAQYPSNGTPKGFGFCEFESAEGVLRALRLLNKFNIDGQEL 200
+ +L CG V SWKR Q S G + FGFCE++ E LRALRLL+ I ++L
Sbjct: 99 SDMLIRQLLAKCGLVLSWKRVQGAS-GKLQAFGFCEYKEPESTLRALRLLHDLQIGEKKL 157
Query: 201 MLKVDQATREYLERYVDKKTENTKKLKET 229
++KVD T+ L+ + KK N ET
Sbjct: 158 LVKVDAKTKAQLDEWKAKKKANGNARPET 186
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 86/195 (44%), Gaps = 9/195 (4%)
Query: 127 PQTKVYVGKIAPTADSDFVLSVLKVCGTVKSWKRAQYPSNGTPKGFGFCEFESAEGVLRA 186
P T V+VG I+ A + +L CG V SWKR Q S G + FGFCE++ E LRA
Sbjct: 85 PTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRVQGAS-GKLQAFGFCEYKEPESTLRA 143
Query: 187 LRLLNKFNIDGQELMLKVDQATREYLERYVDKKTENTKKLKETQDAGAGKEDESVQSVEK 246
LRLL+ I ++L++KVD T+ L+ + KK N ET +DE
Sbjct: 144 LRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKANGNARPET----VTNDDEEAL---- 195
Query: 247 NEPTKSPENLKDNETGNKESHDPTNFGVVTEEDRKADQEALEKLTCMVEERLKTNPLPPP 306
+E TK + + + ++E ++ ++ + R PL P
Sbjct: 196 DEETKRRDQMIKGAIEVLIREYSSELNAPSQESDSHPRKKKKEKKEDIFRRFPVAPLIPY 255
Query: 307 PPQTTADGSGISNSE 321
P T D + I E
Sbjct: 256 PLITKEDINAIEMEE 270
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 57.4 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 99/186 (53%), Gaps = 5/186 (2%)
Query: 348 ETTSDTKASDHDRPETSSPDRSRVHDRRGRDKERDLKRE---KEREIDRYEREAERERVR 404
+ + K + +R E ++ + + R ++ L++E K +E +R ++E E +R
Sbjct: 2748 QKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQE 2807
Query: 405 KEREQRRKIEEAEREYERCLKDWEYREREREKERQYEKEKEKERERKRKKEILYDEEEDE 464
+ER +R K E+ ++E E ++ E ++E +RQ ++ +KE E KR+++ + ++ E
Sbjct: 2808 QERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLERKKIE 2867
Query: 465 DDSRKRWRRSVLEEKRRKRIREKEEDLADEVREEEEIAVAKRRAEEEQLQQQQRDALKLL 524
R++ +S LE K I+++ DE+ + ++I + R + E++ + ++ L L
Sbjct: 2868 LAEREQHIKSKLESDMVKIIKDELTKEKDEIIKNKDIKL--RHSLEQKWLKHLQNILSLK 2925
Query: 525 SDNAVN 530
D+ +N
Sbjct: 2926 IDSLLN 2931
Score = 53.1 bits (126), Expect = 9e-06, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
Query: 383 LKREKEREIDRYE--REAERERVRKER-EQRRKIEEAER-EYERCLKDWEYREREREKER 438
LKR+++ + + E + E+ER+ +E+ EQ +K EE +R E ER K+ + +E+E+ +
Sbjct: 2739 LKRQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQ 2798
Query: 439 QYEKEKEKERER--KRKKEILYDEEEDEDDSRKRWRRSVLEEKRRKRIREKEEDLADEVR 496
+ E+ K +E+ER + K+E L EEE + ++R ++ +++ + +KEE+L + +
Sbjct: 2799 KEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQ 2858
Query: 497 EEEEIAVAKRRAEEEQLQQQ-QRDALKLLSD 526
E E + E+ ++ + + D +K++ D
Sbjct: 2859 ERLERKKIELAEREQHIKSKLESDMVKIIKD 2889
>sp|F1QBY1|NIPLB_DANRE Nipped-B-like protein B OS=Danio rerio GN=nipblb PE=2 SV=1
Length = 2876
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 20/128 (15%)
Query: 354 KASDHDRPETSSPDRSRVHDRRGRDKERDLKREKEREIDRYE-REAERERVRKEREQRRK 412
K + DR + DR +V D+ RDK R+ R+K RE DR + RE +RE++R ER+ R K
Sbjct: 836 KGQEKDRDKVREKDRDKVRDK-DRDKVREKDRDKVREKDRDKLREKDREKIR-ERD-RDK 892
Query: 413 IEEAEREYERCLKDWEYREREREKERQYEKEKEKER------------ERKRKKEILYDE 460
E +R+ E+ + RE+++EKER +++KE+E+ E+KR KE+ D+
Sbjct: 893 GREKDRDKEQV----KTREKDQEKERLKDRDKEREKVRDKGRDRDRDQEKKRNKELTEDK 948
Query: 461 EEDEDDSR 468
+ E SR
Sbjct: 949 QAPEQRSR 956
Score = 41.2 bits (95), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 94/152 (61%), Gaps = 16/152 (10%)
Query: 367 DRSRVHDR---RGRDKERDLKREKEREIDRYEREAERERVRKEREQRRKIEEAEREYERC 423
DR + D+ +GR+K++D + EK RE DR ++E E+ R E++Q +++E+ RE
Sbjct: 777 DREKNQDKELEKGREKDQDKELEKGREKDR-DKEMEKAR---EKDQDKELEKG-RE---- 827
Query: 424 LKDWEYREREREKERQYEKEKEKERERKRKKEILYDEEEDEDDSRKRWRRSVLEEKRRKR 483
KD + +E E+ +E+ +K +EK+R++ R K+ E+D D R++ R L EK R++
Sbjct: 828 -KDQD-KELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREK-DRDKLREKDREK 884
Query: 484 IREKEEDLADEV-REEEEIAVAKRRAEEEQLQ 514
IRE++ D E R++E++ ++ E+E+L+
Sbjct: 885 IRERDRDKGREKDRDKEQVKTREKDQEKERLK 916
>sp|P33332|SEC3_YEAST Exocyst complex component SEC3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC3 PE=1 SV=1
Length = 1336
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 95/181 (52%), Gaps = 41/181 (22%)
Query: 380 ERDLKREKEREIDRYEREAERERVRKEREQRRKIEEAEREYERCLKDWEYREREREKERQ 439
++ L+ +KE E+ R E E R+++E +R + E E++R L+ E E++RQ
Sbjct: 348 QKRLQLQKENEMKRLEEE---RRIKQEERKR----QMELEHQRQLE-------EEERKRQ 393
Query: 440 YEKEKEKERERKRKKEILYDEEEDEDDSRKRWRRSVLEEKRRKRIREKEEDLADEVREEE 499
E E +K+ E KR+++ E++ R + R +LE +R++R E++ A+ +++EE
Sbjct: 394 MELEAKKQMELKRQRQF-------EEEQRLKKERELLEIQRKQR----EQETAERLKKEE 442
Query: 500 EIAVA---------KRRAEEEQLQQQQRDAL-KLLSDNAVNGSLAEESAVESKGDPSSQN 549
+ A+A + + + E Q+ + LL D +N LAE E++ P+ QN
Sbjct: 443 QEALAKKEEEEKSKRNKVDNESYTQEINGKVDNLLED--LNAVLAE----ETETTPTMQN 496
Query: 550 G 550
G
Sbjct: 497 G 497
>sp|C0H5F4|RBP2B_PLAF7 Reticulocyte binding protein 2 homolog b OS=Plasmodium falciparum
(isolate 3D7) GN=Rh2b PE=3 SV=1
Length = 3179
Score = 37.0 bits (84), Expect = 0.59, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 83/147 (56%), Gaps = 7/147 (4%)
Query: 428 EYREREREKERQYEKEKEKERERKRKKEILYDEEEDEDDSRKRWRRSVLEEKRRKRI-RE 486
E EREK+ Q +KE K++E++R+++ +E + + + L+ + ++R+ RE
Sbjct: 2629 EKERLEREKQEQLKKEALKKQEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLERE 2688
Query: 487 KEEDLA--DEVREEEEIAVAKRRAEEEQLQQQQRDALKLLSDNAVNGSLAEESAVESKGD 544
K+E L +E+R++E+ +R +E L++Q++ +++++ V G E + + +
Sbjct: 2689 KQEQLQKEEELRKKEQEKQQQRNIQE--LEEQKKP--EIINEALVKGDKILEGSDQRNME 2744
Query: 545 PSSQNGNGDESTNVPIAASDMRQSGNV 571
S N + D + N PI+ S++ +S ++
Sbjct: 2745 LSKPNVSMDNTNNSPISNSEITESDDI 2771
>sp|Q9QXL2|KI21A_MOUSE Kinesin-like protein KIF21A OS=Mus musculus GN=Kif21a PE=1 SV=2
Length = 1672
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 20/206 (9%)
Query: 372 HDRRGRDKERDLKREKEREIDRYEREAERERVRKEREQR--------RKIEEAEREYERC 423
H R ERD + ++ Y E + +V+ E E++ ++++ A++E+ R
Sbjct: 689 HKIRDTQLERDQVLQNLGSVESYSEEKAK-KVKCEYEKKLHAMNKELQRLQTAQKEHARL 747
Query: 424 LKDWEYREREREKERQ--YEKEKEKERERKRKKEILYDEEEDEDDSRKRWRRSVLEEKRR 481
LK+ E++ +K +Q E +K K R K+ KE E+E + R R + + K+
Sbjct: 748 LKNQSQYEKQLKKLQQDVMEMKKTKVRLMKQMKE----EQEKARLTESRRNREIAQLKKD 803
Query: 482 KRIREKEEDLADEVREEEEIAVAKRRAEEEQLQQQQRDALKLLSDNAVNGSLAEESAVES 541
+R R+ + L + + +E+ + ++ E L++Q R +SD + S+ ES
Sbjct: 804 QRKRDHQLRLLEAQKRNQEVVLRRKTEEVTALRRQVRP----MSDKVAGKVTRKLSSSES 859
Query: 542 KG-DPSSQNGNGDESTNVPIAASDMR 566
D S +G+ T+ P MR
Sbjct: 860 PAPDTGSSAASGEADTSRPGTQQKMR 885
>sp|Q7Z4S6|KI21A_HUMAN Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2
Length = 1674
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 15/157 (9%)
Query: 372 HDRRGRDKERDLKREKEREIDRYEREAERERVRKEREQR--------RKIEEAEREYERC 423
H R ERD + ++ Y E + +VR E E++ ++++ A++E+ R
Sbjct: 687 HKIRDTQLERDQVLQNLGSVESYSEEKAK-KVRSEYEKKLQAMNKELQRLQAAQKEHARL 745
Query: 424 LKDWEYREREREKERQ--YEKEKEKERERKRKKEILYDEEEDEDDSRKRWRRSVLEEKRR 481
LK+ E++ +K +Q E +K K R K+ KE E+E + R R + + K+
Sbjct: 746 LKNQSQYEKQLKKLQQDVMEMKKTKVRLMKQMKE----EQEKARLTESRRNREIAQLKKD 801
Query: 482 KRIREKEEDLADEVREEEEIAVAKRRAEEEQLQQQQR 518
+R R+ + L + + +E+ + ++ E L++Q R
Sbjct: 802 QRKRDHQLRLLEAQKRNQEVVLRRKTEEVTALRRQVR 838
>sp|Q8WXA9|SREK1_HUMAN Splicing regulatory glutamine/lysine-rich protein 1 OS=Homo sapiens
GN=SREK1 PE=1 SV=1
Length = 508
Score = 33.9 bits (76), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 15/131 (11%)
Query: 61 LMCGLPRYPAPYPSMVRPAFPPRPPGPVGV-LPSVARPPVPGIPGVRPIMPPVVRPVPLP 119
LM G P P P+ P +GV L S+ P + + + +P +
Sbjct: 4 LMPGAGLLPIPTPN---------PLTTLGVSLSSLGAIPAAALDPNIATLGEIPQPPLMG 54
Query: 120 TVTPAEKPQTK--VYVGKI-APTADSDFVLSVLKVCGTVKSWKRAQYPSNGTPKGFGFCE 176
V P++ + + VYVG + + T +D +L K G VK + A + P F F E
Sbjct: 55 NVDPSKIDEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQ--PTRFAFVE 112
Query: 177 FESAEGVLRAL 187
F V RAL
Sbjct: 113 FADQNSVPRAL 123
>sp|Q75CK5|NST1_ASHGO Stress response protein NST1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NST1 PE=3
SV=2
Length = 1207
Score = 33.5 bits (75), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 24/91 (26%)
Query: 384 KREKEREIDRYEREAERERVRKEREQRRKIEEAEREYERCLKDWEYRER----------- 432
KR++ E R ++EAE +++ QR+K+EEA+R+ KD E R+R
Sbjct: 618 KRKQVEEEARLKQEAEAREMQRRENQRKKVEEAKRK-----KDLEMRKRLEEQRRREEEQ 672
Query: 433 --------EREKERQYEKEKEKERERKRKKE 455
E +++R E+++ +E +RKRK+E
Sbjct: 673 ERQRRMKEEIKRKRDQERKQREEEQRKRKQE 703
>sp|P46504|YLX8_CAEEL Uncharacterized protein F23F12.8 OS=Caenorhabditis elegans
GN=F23F12.8 PE=4 SV=2
Length = 980
Score = 33.1 bits (74), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 398 AERERVRKEREQRRKIEEAEREYERCLKDWEYREREREKERQYEKEKEKERERKRKKEIL 457
+ ++ ER+Q+ K E+ E+E R K+ + RE ER ++ + E E ++ E R+ I
Sbjct: 302 VQHQKTVSERQQQEKFEKMEQERLRQEKEEKARELERRRKLE-ESETARQAELDRQATIY 360
Query: 458 YDEEEDEDDSRKRWRRSVLEEKRRKRIREKEEDLADE---VREEEEIAVAKRRAEE 510
++E + + R LEEK+R+ R ++E++A E +RE E + + ++R E
Sbjct: 361 AEQERMAMERNRELERIRLEEKKRENERVRQEEIAMEISKIRELERLQLERQRKNE 416
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.130 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 329,373,320
Number of Sequences: 539616
Number of extensions: 16485245
Number of successful extensions: 255238
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2194
Number of HSP's successfully gapped in prelim test: 5200
Number of HSP's that attempted gapping in prelim test: 108712
Number of HSP's gapped (non-prelim): 61379
length of query: 826
length of database: 191,569,459
effective HSP length: 126
effective length of query: 700
effective length of database: 123,577,843
effective search space: 86504490100
effective search space used: 86504490100
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)