Query 003362
Match_columns 826
No_of_seqs 244 out of 308
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 22:41:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003362.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003362hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yrx_A Hypothetical protein RS 96.3 0.012 4E-07 55.4 8.3 85 711-826 30-114 (121)
2 2iyg_A APPA, antirepressor of 95.3 0.045 1.6E-06 51.7 8.2 79 710-807 41-119 (124)
3 1x0p_A Hypothetical protein TL 94.5 0.045 1.5E-06 52.6 5.8 83 711-812 29-115 (143)
4 2hfn_A Synechocystis photorece 94.5 0.084 2.9E-06 51.3 7.7 83 710-811 31-117 (153)
5 2byc_A Blue-light receptor of 93.2 0.16 5.3E-06 48.7 6.8 72 711-801 31-102 (137)
6 3gfz_A Klebsiella pneumoniae B 88.5 1 3.6E-05 49.3 8.5 85 712-816 37-126 (413)
7 2lxf_A Uncharacterized protein 79.5 2.3 7.8E-05 40.0 5.3 61 688-748 30-92 (121)
8 1ulr_A Putative acylphosphatas 70.0 3 0.0001 36.6 3.3 45 705-749 16-61 (88)
9 2gv1_A Probable acylphosphatas 69.2 2.8 9.7E-05 37.1 3.0 47 702-748 15-62 (92)
10 1urr_A CG18505 protein; acylph 67.7 3 0.0001 37.7 2.9 49 701-749 21-70 (102)
11 3trg_A Acylphosphatase; fatty 67.2 3 0.0001 37.5 2.8 49 701-749 22-71 (98)
12 2vh7_A Acylphosphatase-1; hydr 66.8 3.3 0.00011 37.1 2.9 49 701-749 18-67 (99)
13 2fhm_A Probable acylphosphatas 66.8 3.7 0.00013 36.2 3.2 46 705-750 16-62 (91)
14 1w2i_A Acylphosphatase; hydrol 66.4 2.9 0.0001 37.0 2.5 45 704-748 17-62 (91)
15 1aps_A Acylphosphatase; hydrol 65.9 2.6 9E-05 37.7 2.1 57 692-748 7-65 (98)
16 2bjd_A Acylphosphatase; hypert 63.3 4.3 0.00015 36.7 3.0 50 700-749 23-73 (101)
17 1f32_A Major pepsin inhibitor 49.2 12 0.00041 36.2 3.5 37 588-624 95-144 (149)
18 3itf_A Periplasmic adaptor pro 47.4 77 0.0026 30.5 9.0 81 583-675 40-125 (145)
19 2kxh_B Peptide of FAR upstream 45.5 15 0.00052 27.0 2.8 17 338-354 9-25 (31)
20 1gxu_A Hydrogenase maturation 45.1 9.4 0.00032 33.8 2.1 37 701-738 17-54 (91)
21 3o39_A Periplasmic protein rel 41.3 44 0.0015 30.7 6.0 77 583-675 12-97 (108)
22 3zs9_C Golgi to ER traffic pro 36.8 24 0.00083 27.2 2.8 20 588-607 3-22 (38)
23 2ksw_A Oryctin; kazal-type, pr 31.5 39 0.0013 27.9 3.4 29 717-746 14-42 (66)
24 3sjd_D Golgi to ER traffic pro 27.7 47 0.0016 26.5 3.2 25 585-609 10-34 (46)
25 4f67_A UPF0176 protein LPG2838 24.5 56 0.0019 34.1 4.2 60 690-750 15-76 (265)
26 3oeo_A Spheroplast protein Y; 24.1 83 0.0028 29.7 4.9 81 583-675 28-113 (138)
No 1
>1yrx_A Hypothetical protein RSPH03001874; ferredoxin-like fold, flavin binding, photoreceptor, transcr; HET: FMN D9G; 2.30A {Rhodobacter sphaeroides 2} SCOP: d.58.10.2 PDB: 2bun_A*
Probab=96.25 E-value=0.012 Score=55.42 Aligned_cols=85 Identities=18% Similarity=0.314 Sum_probs=67.0
Q ss_pred ccccccccceeEEEEcCCceEEEEecchHHHHHHHHHHhhhccCCccccCCCccccccCCCCCCeeEEEEeeecCCCCCC
Q 003362 711 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 790 (826)
Q Consensus 711 ~~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~E~~~~~~d~~de~~d~~~N~C~LVWEG~vk~r~F~ 790 (826)
..|-.++++||+.+++.+.=+=|+||.+.++.. |+ .||.= |..-..|.++-.|.+..|.|.
T Consensus 30 r~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~---Ly-~rI~~---------------D~RH~~v~~l~~~~i~~R~F~ 90 (121)
T 1yrx_A 30 QAHNARAQLTGALFYSQGVFFQWLEGRPAAVAE---VM-THIQR---------------DRRHSNVEILAEEPIAKRRFA 90 (121)
T ss_dssp HHHHHHHTCEEEEEEETTEEEEEEEECHHHHHH---HH-HHHHT---------------CTTEEEEEEEEEEEESSCSCS
T ss_pred HHhhhhcCCEEEEEEeCCEEEEEecCCHHHHHH---HH-HHHhc---------------CCCcCCeEEEEeeeccccccC
Confidence 456678999999999999989999999999975 33 45542 223456889999999999999
Q ss_pred CceeEecCCHHHHHHHHHhcCchhHHHHHhcccCCC
Q 003362 791 RFFVHECMTEAAAKKVFADAGVAHYWDLAVNFNDEI 826 (826)
Q Consensus 791 ~w~~k~c~te~~Are~L~~~~~ehYWdlA~~~~~~~ 826 (826)
+|.|..+..+. ..|.++..++.+|
T Consensus 91 ~WsM~~~~~~~------------~~~~l~~~~~~~~ 114 (121)
T 1yrx_A 91 GWHMQLSCSEA------------DMRSLGLAESRQI 114 (121)
T ss_dssp SEEEEECCCHH------------HHHHTTCCCCCCC
T ss_pred CCcccccchHH------------HHHhhcccchhhh
Confidence 99999988773 5566666666655
No 2
>2iyg_A APPA, antirepressor of PPSR, sensor of blue light; signal transduction; HET: FMN; 2.3A {Rhodobacter sphaeroides} PDB: 2iyi_A*
Probab=95.33 E-value=0.045 Score=51.69 Aligned_cols=79 Identities=16% Similarity=0.295 Sum_probs=63.5
Q ss_pred cccccccccceeEEEEcCCceEEEEecchHHHHHHHHHHhhhccCCccccCCCccccccCCCCCCeeEEEEeeecCCCCC
Q 003362 710 VDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSF 789 (826)
Q Consensus 710 V~~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~E~~~~~~d~~de~~d~~~N~C~LVWEG~vk~r~F 789 (826)
-..|-.++++||+.+++.+.=+=|+||.+.++.. |+ .||.= |..-..|.++-.|.+..|.|
T Consensus 41 ar~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~---Ly-~rI~~---------------D~RH~~v~~L~~~~i~~R~F 101 (124)
T 2iyg_A 41 SQAHNARAQLTGALFYSQGVFFQWLEGRPAAVAE---VM-THIQR---------------DRRHSNVEILAEEPIAKRRF 101 (124)
T ss_dssp HHHHHHHHTCEEEEEEETTEEEEEEEECHHHHHH---HH-HHHHH---------------CTTEEEEEEEEEEECSSCSS
T ss_pred HHHhhhhcCCEEEEEEcCCEEEEEeeCCHHHHHH---HH-HHHhc---------------CCCcCCeEEEEeeecccCcc
Confidence 3456678999999999999989999999999985 33 44432 22345688999999999999
Q ss_pred CCceeEecCCHHHHHHHH
Q 003362 790 NRFFVHECMTEAAAKKVF 807 (826)
Q Consensus 790 ~~w~~k~c~te~~Are~L 807 (826)
.+|.|..+..+...+.+.
T Consensus 102 ~~WsM~~~~~~~~~~~l~ 119 (124)
T 2iyg_A 102 AGWHMQLSCSEADMRSLG 119 (124)
T ss_dssp TTCSSEEECCHHHHHHHH
T ss_pred CCCcccccchhHHHHHHh
Confidence 999999999887776654
No 3
>1x0p_A Hypothetical protein TLL0078; BLUF, FAD, structural genomics, electron transport; HET: FAD; 2.00A {Thermosynechococcus elongatus} SCOP: d.58.10.2
Probab=94.48 E-value=0.045 Score=52.63 Aligned_cols=83 Identities=14% Similarity=0.179 Sum_probs=64.6
Q ss_pred ccccccccceeEEEEcCCceEEEEecchHHHHHHHHHHhhhccCCccccCCCccccccCCCCCCeeEEEEeeecCCCCCC
Q 003362 711 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 790 (826)
Q Consensus 711 ~~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~E~~~~~~d~~de~~d~~~N~C~LVWEG~vk~r~F~ 790 (826)
..|-.+.++||+.+++.+.=+=|+||.+.++.. |+ .||.= |..-..|++|-.|.+..|.|.
T Consensus 29 ~~~N~~~~ITG~Ll~~~g~F~Q~LEG~~~~V~~---l~-~rI~~---------------D~RH~~v~~l~~~~i~~R~F~ 89 (143)
T 1x0p_A 29 EVNNLRDGITGMLCYGNGMFLQTLEGDRQKVSE---TY-ARILK---------------DPRHHSAEIVEFKAIEERTFI 89 (143)
T ss_dssp HHHHHHHTCEEEEEEETTEEEEEEEEEHHHHHH---HH-HHHHT---------------CTTEEEEEEEEEEECSSCSSC
T ss_pred HHhhhhcCCEEEEEEcCCEEEEEecCCHHHHHH---HH-HHHhc---------------CCCcCCeEEEEeeeccccccC
Confidence 456678999999999999989999999999985 33 45542 223456889999999999999
Q ss_pred CceeEecCCHH----HHHHHHHhcCc
Q 003362 791 RFFVHECMTEA----AAKKVFADAGV 812 (826)
Q Consensus 791 ~w~~k~c~te~----~Are~L~~~~~ 812 (826)
+|.|....-.. ....+|.+++.
T Consensus 90 ~W~M~~~~~~~~~~~~~~~~~~~~~~ 115 (143)
T 1x0p_A 90 NWSMRLVQLGEMDSDTIRRLRLKYSP 115 (143)
T ss_dssp SCSCCEEEGGGSCHHHHHHHHHHTCS
T ss_pred CCcceeecccccchHHHHHHHHhccc
Confidence 99998766555 66666666544
No 4
>2hfn_A Synechocystis photoreceptor (SLR1694); beta sheet ferredoxin-like fold, flavin binding protein, electron transport; HET: FMN; 1.80A {Synechocystis SP} PDB: 2hfo_A* 3mzi_A*
Probab=94.47 E-value=0.084 Score=51.31 Aligned_cols=83 Identities=16% Similarity=0.176 Sum_probs=65.6
Q ss_pred cccccccccceeEEEEcCCceEEEEecchHHHHHHHHHHhhhccCCccccCCCccccccCCCCCCeeEEEEeeecCCCCC
Q 003362 710 VDVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSF 789 (826)
Q Consensus 710 V~~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~E~~~~~~d~~de~~d~~~N~C~LVWEG~vk~r~F 789 (826)
-..|-.+.++||+.+++.+.=+=|+||.+.++.. |+ .||.= |..-..|++|-.|.+..|.|
T Consensus 31 a~~~N~~~gITG~Ll~~~g~F~Q~LEG~~~~V~~---l~-~rI~~---------------D~RH~~v~~l~~~~i~~R~F 91 (153)
T 2hfn_A 31 SQRNNPANGITGLLCYSKPAFLQVLEGECEQVNE---TY-HRIVQ---------------DERHHSPQIIECMPIRRRNF 91 (153)
T ss_dssp HHHHHHHHTCEEEEEEETTEEEEEEEEEHHHHHH---HH-HHHHT---------------CTTEEEEEEEEEEECSSCSS
T ss_pred HHHhhhhcCcEEEEEEeCCEEEEEeeCCHHHHHH---HH-HHHhc---------------CCCcCCeEEEEecccCCCcc
Confidence 3456678999999999999989999999999985 33 45542 23345799999999999999
Q ss_pred CCceeEecCCH----HHHHHHHHhcC
Q 003362 790 NRFFVHECMTE----AAAKKVFADAG 811 (826)
Q Consensus 790 ~~w~~k~c~te----~~Are~L~~~~ 811 (826)
.+|.|..+.-. .....+|.+++
T Consensus 92 ~~W~M~~~~~~~~~~~~~~~~~~~~~ 117 (153)
T 2hfn_A 92 EVWSMQAITVNDLSTEQVKTLVLKYS 117 (153)
T ss_dssp TTCSCEEEECSTTSCHHHHHHHHHTS
T ss_pred CCCcCeeecccccchhHHHHHHHhcc
Confidence 99999987766 66667776654
No 5
>2byc_A Blue-light receptor of the BLUF-family; signaling protein, photoreceptor, flavin; HET: FMN; 1.9A {Rhodobacter sphaeroides} SCOP: d.58.10.2
Probab=93.15 E-value=0.16 Score=48.74 Aligned_cols=72 Identities=15% Similarity=0.106 Sum_probs=58.4
Q ss_pred ccccccccceeEEEEcCCceEEEEecchHHHHHHHHHHhhhccCCccccCCCccccccCCCCCCeeEEEEeeecCCCCCC
Q 003362 711 DVNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFN 790 (826)
Q Consensus 711 ~~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~E~~~~~~d~~de~~d~~~N~C~LVWEG~vk~r~F~ 790 (826)
..|-.++++||+.+++.+.=+=|+||.+.++.. |+ .||.= |..-..|.++-.|.+..|.|.
T Consensus 31 r~~N~~~gITG~Ll~~~g~F~QvLEG~~~~V~~---L~-~rI~~---------------D~RH~~v~~L~~~~i~~R~F~ 91 (137)
T 2byc_A 31 RVRNLRLGITGILLYNGVHFVQTIEGPRSACDE---LF-RLISA---------------DPRHQEILAFDLEPITARRFP 91 (137)
T ss_dssp HHHHHHHTCEEEEEECSSEEEEEEEEEHHHHHH---HH-HHHHT---------------CTTEEEEEEEEEEECSSCSST
T ss_pred HHhhhhcCCEEEEEEeCCEEEEEeeCCHHHHHH---HH-HHHhc---------------CCCcCCeEEEEecccCCCcCC
Confidence 456678999999999999989999999999985 33 45542 233457999999999999999
Q ss_pred CceeEecCCHH
Q 003362 791 RFFVHECMTEA 801 (826)
Q Consensus 791 ~w~~k~c~te~ 801 (826)
+|.|..+.-+.
T Consensus 92 ~W~M~~~~~~~ 102 (137)
T 2byc_A 92 DWSMRIVSRKE 102 (137)
T ss_dssp TCSCEEECHHH
T ss_pred CCcCccccccc
Confidence 99999877653
No 6
>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling PR; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A*
Probab=88.45 E-value=1 Score=49.32 Aligned_cols=85 Identities=15% Similarity=0.084 Sum_probs=61.1
Q ss_pred cccccccceeEEEEcCCceEEEEecchHHHHHHHHHHhhhccCCccccCCCccccccCCCCCCeeEEEEeeecCCCCCCC
Q 003362 712 VNAHENRLTGCAVICEGINVVVVEGGSKSIKRYGKLMLRRIDWAKAVKEEDEDEDETTDKPVNKCVLVWQGNVARPSFNR 791 (826)
Q Consensus 712 ~NAqQl~LTG~~li~~~~nlVVVEGG~KsiKkYkkLMl~RIkW~E~~~~~~d~~de~~d~~~N~C~LVWEG~vk~r~F~~ 791 (826)
.|-.+.++||+.+++.+.=+=|.||.+.++.. |+ .||.= |..-..|+++-.|.+..|.|.+
T Consensus 37 ~~N~~~~itG~L~~~~~~F~Q~lEG~~~~v~~---l~-~~I~~---------------D~RH~~v~~l~~~~~~~r~F~~ 97 (413)
T 3gfz_A 37 SKNLPLGITGILLFNGLQFFQVLEGTEEALES---LF-SEIQS---------------DPRHRDVVELMRDYSAYRRFHG 97 (413)
T ss_dssp HHHGGGTCEEEEEECSSEEEEEEEEEHHHHHH---HH-HHHHT---------------CTTCEEEEEEEEEECSSCSSTT
T ss_pred HhccccCcEEEEEEeCCEEEEEEeCCHHHHHH---HH-HHHhc---------------CCCcCCeEEEEEeecCcccCCC
Confidence 56678999999999999889999999999986 33 45543 2334578999999999999999
Q ss_pred ceeEecC-----CHHHHHHHHHhcCchhHH
Q 003362 792 FFVHECM-----TEAAAKKVFADAGVAHYW 816 (826)
Q Consensus 792 w~~k~c~-----te~~Are~L~~~~~ehYW 816 (826)
|.|.... ++.....+| +++-.+|+
T Consensus 98 w~M~~~~l~~~~~~~~~~~i~-~~~~~~~~ 126 (413)
T 3gfz_A 98 TGMRILDLRLFETDGALEEIL-RFSTFGVT 126 (413)
T ss_dssp CSCCEEEGGGSCTTHHHHHHH-HHCC----
T ss_pred cchhhccccccChHHHHHHHH-hhCCcccc
Confidence 9998762 333333444 55555554
No 7
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=79.52 E-value=2.3 Score=40.03 Aligned_cols=61 Identities=18% Similarity=0.194 Sum_probs=50.5
Q ss_pred CCceEEEEEEEccCCC-CccccccccccccccceeEEE-EcCCceEEEEecchHHHHHHHHHH
Q 003362 688 SVETIVSVYKINDLSH-PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 748 (826)
Q Consensus 688 s~gv~~aVyrI~~Lsn-p~hrFKV~~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLM 748 (826)
+..+.+..|+|.=..- =-.|+-|...|++|+|+|.|. +.++-=.|+|||.+.++..|..++
T Consensus 30 ~~di~t~~frV~G~VQGVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~~~v~~f~~~l 92 (121)
T 2lxf_A 30 SEDVTTLCYRVTGKVQGVFFRKYTKKEADALSLVGYVTNNEDGSVSGVVQGPKEQVDAFVKYL 92 (121)
T ss_dssp STTEEEEEEEEEECTTCCCCHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHH
T ss_pred ccCEEEEEEEEEEeeCCcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHH
Confidence 4567888899986544 568999999999999999886 556656899999999999998776
No 8
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=69.98 E-value=3 Score=36.62 Aligned_cols=45 Identities=24% Similarity=0.229 Sum_probs=36.2
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchHHHHHHHHHHh
Q 003362 705 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 749 (826)
Q Consensus 705 ~hrFKV~~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 749 (826)
--|+-|-.-|++|+|+|.|. ..++-=.|++||.+.++..|...+.
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~ 61 (88)
T 1ulr_A 16 GYRAFAQKKALELGLSGYAENLPDGRVEVVAEGPKEALELFLHHLK 61 (88)
T ss_dssp SHHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHH
Confidence 35677788899999999875 4456457899999999999887774
No 9
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=69.21 E-value=2.8 Score=37.09 Aligned_cols=47 Identities=21% Similarity=0.258 Sum_probs=37.7
Q ss_pred CCCccccccccccccccceeEEE-EcCCceEEEEecchHHHHHHHHHH
Q 003362 702 SHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 748 (826)
Q Consensus 702 snp~hrFKV~~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLM 748 (826)
.-=-.|+-|..-|++|+|+|.|. ..++-=.|+|||.+.++..|...+
T Consensus 15 QGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l 62 (92)
T 2gv1_A 15 QGVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWL 62 (92)
T ss_dssp TTTTCCSHHHHHHHHHTCCCEEEECSSSCEEEEECSCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHh
Confidence 33456788888999999999875 445645788999999999988877
No 10
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=67.74 E-value=3 Score=37.68 Aligned_cols=49 Identities=10% Similarity=0.026 Sum_probs=39.8
Q ss_pred CCCCccccccccccccccceeEEE-EcCCceEEEEecchHHHHHHHHHHh
Q 003362 701 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 749 (826)
Q Consensus 701 Lsnp~hrFKV~~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 749 (826)
.+-=--|+-|..-|++|+|+|.|. ..++-=.|+|||.+.++..|...+.
T Consensus 21 VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l~ 70 (102)
T 1urr_A 21 VQGVFFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKHWLE 70 (102)
T ss_dssp CSSSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHH
T ss_pred ECCcChhHHHHHHHHHhCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHH
Confidence 444557888889999999999875 5556458899999999999988775
No 11
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=67.24 E-value=3 Score=37.54 Aligned_cols=49 Identities=24% Similarity=0.179 Sum_probs=39.0
Q ss_pred CCCCccccccccccccccceeEEE-EcCCceEEEEecchHHHHHHHHHHh
Q 003362 701 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 749 (826)
Q Consensus 701 Lsnp~hrFKV~~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 749 (826)
..-=-.|+-|..-|++|+|+|.|. +.++-=.|+|||.+.++..|...+.
T Consensus 22 VQGVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~~~l~~f~~~l~ 71 (98)
T 3trg_A 22 VQGVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLW 71 (98)
T ss_dssp CSSSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHTT
T ss_pred ECCCCccHHHHHHHHHcCCeEEEEECCCCEEEEEEEECHHHHHHHHHHHH
Confidence 344557888889999999999985 4456567889999999999877664
No 12
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=66.82 E-value=3.3 Score=37.13 Aligned_cols=49 Identities=10% Similarity=0.073 Sum_probs=39.3
Q ss_pred CCCCccccccccccccccceeEEE-EcCCceEEEEecchHHHHHHHHHHh
Q 003362 701 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 749 (826)
Q Consensus 701 Lsnp~hrFKV~~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 749 (826)
.+-=--|+-|..-|++|+|+|.|. +.++-=.|+|||.+.++..|...+.
T Consensus 18 VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~v~~f~~~l~ 67 (99)
T 2vh7_A 18 VQGVFFRKHTQAEGKKLGLVGWVQNTDRGTVQGQLQGPISKVRHMQEWLE 67 (99)
T ss_dssp CSSSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHH
T ss_pred eCCcChHHHHHHHHHHcCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHH
Confidence 344456788889999999999875 5556457899999999999988775
No 13
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=66.76 E-value=3.7 Score=36.20 Aligned_cols=46 Identities=17% Similarity=0.322 Sum_probs=37.0
Q ss_pred ccccccccccccccceeEEE-EcCCceEEEEecchHHHHHHHHHHhh
Q 003362 705 KTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLMLR 750 (826)
Q Consensus 705 ~hrFKV~~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl~ 750 (826)
--|+-|-.-|++|+|+|.|. ..++-=.|+|+|.+.++..|...+.+
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~~ 62 (91)
T 2fhm_A 16 GFRYFVQMEADKRKLAGWVKNRDDGRVEILAEGPENALQSFVEAVKN 62 (91)
T ss_dssp CHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHHh
Confidence 35677788899999999885 45564578999999999999887754
No 14
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=66.40 E-value=2.9 Score=36.96 Aligned_cols=45 Identities=16% Similarity=0.206 Sum_probs=36.1
Q ss_pred CccccccccccccccceeEEE-EcCCceEEEEecchHHHHHHHHHH
Q 003362 704 PKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 748 (826)
Q Consensus 704 p~hrFKV~~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLM 748 (826)
=-.|+-|...|++|+|+|.|. ..++-=.|+|+|.+.++..|...+
T Consensus 17 VGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l 62 (91)
T 1w2i_A 17 VGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWA 62 (91)
T ss_dssp SSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHcCCeEEEEECCCCCEEEEEEeCHHHHHHHHHHH
Confidence 345777888999999999885 445645789999999999887666
No 15
>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1
Probab=65.91 E-value=2.6 Score=37.69 Aligned_cols=57 Identities=12% Similarity=0.134 Sum_probs=41.8
Q ss_pred EEEEEEEc-cCCCCccccccccccccccceeEEE-EcCCceEEEEecchHHHHHHHHHH
Q 003362 692 IVSVYKIN-DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLM 748 (826)
Q Consensus 692 ~~aVyrI~-~Lsnp~hrFKV~~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLM 748 (826)
.+.-|.|. ..+-=--|+-|..-|++|+|+|.|. +.++-=.|+|||.+.++..|...+
T Consensus 7 ~~~~i~V~G~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l 65 (98)
T 1aps_A 7 KSVDYEVFGRVQGVCFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGPEEKVNSMKSWL 65 (98)
T ss_dssp EEEEEEEECTTSCCCCTTHHHHHHHHHTCEEEEECCTTCEEEEEEEEEHHHHHHHHHSS
T ss_pred EEEEEEEEEEECCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHH
Confidence 33334444 3344567888999999999999875 455645789999999999886655
No 16
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=63.26 E-value=4.3 Score=36.73 Aligned_cols=50 Identities=20% Similarity=0.161 Sum_probs=40.3
Q ss_pred cCCCCccccccccccccccceeEEE-EcCCceEEEEecchHHHHHHHHHHh
Q 003362 700 DLSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGSKSIKRYGKLML 749 (826)
Q Consensus 700 ~Lsnp~hrFKV~~NAqQl~LTG~~l-i~~~~nlVVVEGG~KsiKkYkkLMl 749 (826)
..+----|+-|-.-|++|+|+|.|. ..++-=.|+|+|.+.++..|...+.
T Consensus 23 ~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~ 73 (101)
T 2bjd_A 23 LVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIK 73 (101)
T ss_dssp ECSSSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHT
T ss_pred eECCcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHH
Confidence 3455667889999999999999885 4556457899999999999877773
No 17
>1f32_A Major pepsin inhibitor PI-3; proteinase inhibitor, hydrolase inhibitor; 1.75A {Ascaris suum} SCOP: d.62.1.1 PDB: 1f34_B*
Probab=49.20 E-value=12 Score=36.24 Aligned_cols=37 Identities=32% Similarity=0.566 Sum_probs=21.7
Q ss_pred CCCHHHHHHHHH-HHHHHHHHHHHHHHHc------------CCCCCCCcc
Q 003362 588 KLTKKEQKKLRT-QRRLAREKDRQEMIRQ------------GLIEPPKPK 624 (826)
Q Consensus 588 yLTKKEqKKlRR-qrR~e~~KEkQdKIRL------------GL~PPPpPK 624 (826)
-||..|+..|-. +......+|+|+.+++ ||.||++|-
T Consensus 95 dLT~~Eq~EL~~y~~k~~a~eer~e~~~~~~~~~k~~k~~~~~~pP~kPS 144 (149)
T 1f32_A 95 DLTAKDHAEVQTFREKIAAFEEQQENQPPSSGMPHGAVPAGGLSPPPPPS 144 (149)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHC--------------------CCCCCCG
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCCCcccccCCCCCCCC
Confidence 389999999986 5666677777766654 677777773
No 18
>3itf_A Periplasmic adaptor protein CPXP; CPXR, CPXA, cpxrap, CPX-pathway, envelope stress, transduction; HET: MSE; 1.45A {Escherichia coli str} PDB: 3qzc_A
Probab=47.42 E-value=77 Score=30.51 Aligned_cols=81 Identities=21% Similarity=0.302 Sum_probs=41.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHH
Q 003362 583 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID 662 (826)
Q Consensus 583 ~~~plyLTKKEqKKlRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmaeR~~~He~ 662 (826)
....|-||..-+.+||......+... ++ +....-.-|.-|-...--|+.+|.+.+.+..+........
T Consensus 40 m~~~L~LTdeQkqqir~L~~~~r~~~----------~~--~~~~~r~~l~~Li~ad~fDeaa~ral~~~~~~~~~e~~v~ 107 (145)
T 3itf_A 40 MFDGISLTEHQRQQMRDLMQQARHEQ----------PP--VNVSELETMHRLVTAENFDENAVRAQAEKMANEQIARQVE 107 (145)
T ss_dssp TTTTCCCCHHHHHHHHHHHHHHHHHS----------CC--CCHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHh----------hh--ccHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999999988765444321 11 1111222233333333446555555554444433332222
Q ss_pred ----HHHhcc-CCHHHHH
Q 003362 663 ----RNIARK-LTPAERR 675 (826)
Q Consensus 663 ----~N~eRK-LT~EqRr 675 (826)
+|.--. ||||||.
T Consensus 108 r~k~~~qiy~vLTPEQk~ 125 (145)
T 3itf_A 108 MAKVRNQMYRLLTPEQQA 125 (145)
T ss_dssp HHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHhhCCHHHHH
Confidence 233333 9999994
No 19
>2kxh_B Peptide of FAR upstream element-binding protein 1; RRM, FIR, FBP, protein-protein complex, protein binding; NMR {Homo sapiens}
Probab=45.46 E-value=15 Score=27.05 Aligned_cols=17 Identities=41% Similarity=0.667 Sum_probs=14.8
Q ss_pred ccHHHHHHHHHHHHHhc
Q 003362 338 TNIEAVKRAQELAAKMG 354 (826)
Q Consensus 338 ~~~ea~~r~~~laa~~~ 354 (826)
.=.+|+.||.++||||+
T Consensus 9 aFadA~~RaRQIaAKig 25 (31)
T 2kxh_B 9 AFKDALQRARQIAAKIG 25 (31)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 33689999999999997
No 20
>1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} SCOP: d.58.10.1 PDB: 1gxt_A
Probab=45.11 E-value=9.4 Score=33.79 Aligned_cols=37 Identities=19% Similarity=-0.004 Sum_probs=29.0
Q ss_pred CCCCccccccccccccccceeEEE-EcCCceEEEEecch
Q 003362 701 LSHPKTRFKVDVNAHENRLTGCAV-ICEGINVVVVEGGS 738 (826)
Q Consensus 701 Lsnp~hrFKV~~NAqQl~LTG~~l-i~~~~nlVVVEGG~ 738 (826)
.+-=--|+-|...|++|+|+|.|. +.++ =.|+|||.+
T Consensus 17 VQGVGFR~~v~~~A~~lgL~G~VrN~~dG-Vei~~eG~~ 54 (91)
T 1gxu_A 17 VQGVGFRPFVWQLAQQLNLHGDVCNDGDG-VEVRLREDP 54 (91)
T ss_dssp CSSSSHHHHHHHHHHHHTCCEEEEECSSS-EEEEESSCC
T ss_pred eCCcCHHHHHHHHHHHcCCeEEEEECCCc-EEEEEEECH
Confidence 344556788889999999999875 5566 577889988
No 21
>3o39_A Periplasmic protein related to spheroblast format; alpha-helical, structural genomics, montreal-kingston bacter structural genomics initiative; HET: MSE; 2.60A {Escherichia coli}
Probab=41.31 E-value=44 Score=30.69 Aligned_cols=77 Identities=19% Similarity=0.346 Sum_probs=44.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHHH
Q 003362 583 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID 662 (826)
Q Consensus 583 ~~~plyLTKKEqKKlRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmaeR~~~He~ 662 (826)
....|-||-.-+-+||..+...+..- +.| -.--...|..++.++.. | |+.||.+++++.+.+.+
T Consensus 12 ~~~~L~LTd~Qk~qir~L~~~~r~~~----------~~~-~~~~r~~m~~Li~ad~F-D----Eaaar~l~~~~~~~~~e 75 (108)
T 3o39_A 12 SFKDLNLTDAQKQQIREIMKGQRDQM----------KRP-PLEERRAMHDIIASDTF-D----KAKAEAQIAKMEEQRKA 75 (108)
T ss_dssp -CCCSCCCHHHHHHHHHHHHTTTTSC----------CCC-CHHHHHHHHHHHSSSSC-C----HHHHHHHHHHTHHHHHH
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHhc----------ccc-cHHHHHHHHHHhccCCC-C----HHHHHHHHHHHHHHHHH
Confidence 35789999888888877665544321 111 11112234444444433 4 66666666666666655
Q ss_pred HHHhc---------cCCHHHHH
Q 003362 663 RNIAR---------KLTPAERR 675 (826)
Q Consensus 663 ~N~eR---------KLT~EqRr 675 (826)
+=.+| =||||||.
T Consensus 76 ~~v~~~r~~~qmy~lLTPEQk~ 97 (108)
T 3o39_A 76 NMLAHMETQNKIYNILTPEQKK 97 (108)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHH
Confidence 54443 49999994
No 22
>3zs9_C Golgi to ER traffic protein 2; hydrolase-transport protein complex, membrane protein, targe factor; HET: ADP; 2.10A {Saccharomyces cerevisiae}
Probab=36.77 E-value=24 Score=27.18 Aligned_cols=20 Identities=30% Similarity=0.478 Sum_probs=16.7
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 003362 588 KLTKKEQKKLRTQRRLAREK 607 (826)
Q Consensus 588 yLTKKEqKKlRRqrR~e~~K 607 (826)
-||..|+.+|||.+|+++-+
T Consensus 3 els~~ekaRlrRERR~aKi~ 22 (38)
T 3zs9_C 3 ELTEAEKRRLLRERRQKKFS 22 (38)
T ss_dssp -CCHHHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHHHH
Confidence 38999999999999988754
No 23
>2ksw_A Oryctin; kazal-type, protease inhibitor, hydrolase inhibitor; NMR {Oryctes rhinoceros}
Probab=31.49 E-value=39 Score=27.90 Aligned_cols=29 Identities=24% Similarity=0.401 Sum_probs=23.1
Q ss_pred ccceeEEEEcCCceEEEEecchHHHHHHHH
Q 003362 717 NRLTGCAVICEGINVVVVEGGSKSIKRYGK 746 (826)
Q Consensus 717 l~LTG~~li~~~~nlVVVEGG~KsiKkYkk 746 (826)
+.|.--|+++|.-+||||-||- ++.+|+=
T Consensus 14 mdlvphcflnpekgivvvhggc-alskykc 42 (66)
T 2ksw_A 14 MDLVPHCFLNPEKGIVVVHGGC-ALSKYKC 42 (66)
T ss_dssp CCSCCEEEECTTSCEEEECSHH-HHHHHHH
T ss_pred ccccchhhcccccCEEEEecce-eeeeccc
Confidence 3466679999999999999985 6677764
No 24
>3sjd_D Golgi to ER traffic protein 2; ATPase, receptor complex, TA-protein biogenesis, GET pathway hydrolase-transport protein complex; HET: ADP; 4.60A {Saccharomyces cerevisiae}
Probab=27.74 E-value=47 Score=26.48 Aligned_cols=25 Identities=24% Similarity=0.336 Sum_probs=17.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHH
Q 003362 585 QPLKLTKKEQKKLRTQRRLAREKDR 609 (826)
Q Consensus 585 ~plyLTKKEqKKlRRqrR~e~~KEk 609 (826)
..--|+..|+.+|||.+|+++-+.=
T Consensus 10 ~~~~lsa~EkaRLrRERR~aKi~~G 34 (46)
T 3sjd_D 10 MGSELTEAEKRRLLRERRQKKFSNG 34 (46)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHcc
Confidence 4456889999999999999876543
No 25
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=24.45 E-value=56 Score=34.05 Aligned_cols=60 Identities=20% Similarity=0.283 Sum_probs=48.7
Q ss_pred ceEEEEEEEccCCCC-ccccccccccccccceeEEEEcC-CceEEEEecchHHHHHHHHHHhh
Q 003362 690 ETIVSVYKINDLSHP-KTRFKVDVNAHENRLTGCAVICE-GINVVVVEGGSKSIKRYGKLMLR 750 (826)
Q Consensus 690 gv~~aVyrI~~Lsnp-~hrFKV~~NAqQl~LTG~~li~~-~~nlVVVEGG~KsiKkYkkLMl~ 750 (826)
-+.++.|++-.|.|| ..+-.+....++++|+|.++|.+ ++|.-| -|...++..|-..|..
T Consensus 15 ~~~~~~Y~f~~~~d~~~~~~~~~~~~~~~~~~G~i~~a~eGiN~t~-~g~~~~~~~~~~~l~~ 76 (265)
T 4f67_A 15 IIIASFYKFIPLNDFRSLREPILTKMHEIGIKGTIILAHEGVNGGF-AGNREQMNVFYDYLRS 76 (265)
T ss_dssp EEEEEEEEECCCTTHHHHHHHHHHHHHHHTCEEEEEEETTEEEEEE-EECHHHHHHHHHHHTT
T ss_pred eEEEEEeCeecCCCHHHHHHHHHHHHHHCCCeEEEEEcCccceEEE-EeCHHHHHHHHHHHHh
Confidence 356899999999997 45666777889999999998875 888754 5788899999887754
No 26
>3oeo_A Spheroplast protein Y; LTXXQ, extracytoplasmic stress response-related, signaling P; 2.70A {Escherichia coli}
Probab=24.08 E-value=83 Score=29.72 Aligned_cols=81 Identities=20% Similarity=0.352 Sum_probs=42.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhhhhhhhccccCCCChHHHHHHHHHHHHHHHHHH-
Q 003362 583 PPQPLKLTKKEQKKLRTQRRLAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHI- 661 (826)
Q Consensus 583 ~~~plyLTKKEqKKlRRqrR~e~~KEkQdKIRLGL~PPPpPKVKLSNLMrVLg~eAV~DPTkvEa~VR~QmaeR~~~He- 661 (826)
...-|-||..-+.+||......+.. +. .+-...+ .-|..++..+ .-|+.+|++.+.+..+.+.....
T Consensus 28 m~~~L~LT~eQ~~qir~i~~~~r~~---------~~-~~~~~~r-~~l~~Li~a~-~fDeaav~al~~~~~~~~~e~~~~ 95 (138)
T 3oeo_A 28 MFKDLNLTDAQKQQIREIMKGQRDQ---------MK-RPPLEER-RAMHDIITSD-TFDKVKAEAQIAKMEEQRKANMLA 95 (138)
T ss_dssp --CCSCCCTTHHHHHHHHHHHHSSS---------SC-CCCTTHH-HHHHHHHTCS-SCCHHHHHHHHGGGSHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHH---------HH-HHHHHHH-HHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4577999999999999765444221 11 1111111 2344444433 34777776666554443322222
Q ss_pred ---HHHHhcc-CCHHHHH
Q 003362 662 ---DRNIARK-LTPAERR 675 (826)
Q Consensus 662 ---~~N~eRK-LT~EqRr 675 (826)
-.|.-+. ||||||.
T Consensus 96 ~~~~~~~~~~vLTPEQr~ 113 (138)
T 3oeo_A 96 HMETQNKIYNILTPEQKK 113 (138)
T ss_dssp HHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHhCCHHHHH
Confidence 2355555 9999994
Done!