Query 003363
Match_columns 826
No_of_seqs 639 out of 4383
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 22:43:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003363.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003363hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 100.0 5.7E-57 1.9E-61 540.6 51.0 610 102-826 67-726 (740)
2 3o4h_A Acylamino-acid-releasin 100.0 2.4E-53 8.2E-58 495.7 46.5 561 77-826 7-580 (582)
3 3azo_A Aminopeptidase; POP fam 100.0 1.4E-52 4.9E-57 497.1 53.6 593 101-826 28-649 (662)
4 1xfd_A DIP, dipeptidyl aminope 100.0 4.2E-53 1.4E-57 507.0 42.7 619 101-826 65-722 (723)
5 2xdw_A Prolyl endopeptidase; a 100.0 1.2E-50 4.1E-55 483.7 62.9 594 105-826 80-705 (710)
6 2ecf_A Dipeptidyl peptidase IV 100.0 7E-51 2.4E-55 489.1 52.8 598 101-826 113-740 (741)
7 1z68_A Fibroblast activation p 100.0 3.7E-51 1.3E-55 489.7 46.5 606 101-826 64-719 (719)
8 2bkl_A Prolyl endopeptidase; m 100.0 6.3E-50 2.1E-54 476.1 55.7 605 84-826 58-676 (695)
9 1yr2_A Prolyl oligopeptidase; 100.0 2.9E-49 9.8E-54 473.6 57.8 589 100-826 110-718 (741)
10 2z3z_A Dipeptidyl aminopeptida 100.0 1.1E-49 3.9E-54 475.8 53.9 592 101-825 86-706 (706)
11 3iuj_A Prolyl endopeptidase; h 100.0 9.9E-49 3.4E-53 464.5 57.5 603 83-826 66-685 (693)
12 2xe4_A Oligopeptidase B; hydro 100.0 3.7E-47 1.3E-51 453.4 60.3 598 83-826 104-742 (751)
13 4hvt_A Ritya.17583.B, post-pro 100.0 3.2E-38 1.1E-42 367.0 47.1 480 273-826 216-707 (711)
14 4ao6_A Esterase; hydrolase, th 99.9 9.8E-24 3.4E-28 218.1 23.2 209 569-826 36-259 (259)
15 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.3E-22 7.8E-27 223.1 33.4 268 106-499 141-409 (415)
16 3hxk_A Sugar hydrolase; alpha- 99.9 1.6E-23 5.5E-28 218.8 21.9 231 568-825 19-266 (276)
17 3pe7_A Oligogalacturonate lyas 99.9 4E-23 1.4E-27 227.1 24.8 322 102-523 41-385 (388)
18 3f67_A Putative dienelactone h 99.9 2.1E-23 7.2E-28 212.8 18.1 214 572-824 14-241 (241)
19 2wtm_A EST1E; hydrolase; 1.60A 99.9 6.7E-23 2.3E-27 210.9 19.6 240 572-826 9-250 (251)
20 3bxp_A Putative lipase/esteras 99.9 2.4E-22 8.3E-27 209.9 24.1 225 571-824 11-270 (277)
21 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 2.8E-22 9.6E-27 220.3 23.6 229 572-826 135-365 (386)
22 3k2i_A Acyl-coenzyme A thioest 99.9 2E-22 7E-27 224.0 21.9 231 575-826 144-412 (422)
23 3doh_A Esterase; alpha-beta hy 99.9 3E-22 1E-26 219.4 22.8 216 567-826 148-380 (380)
24 1vlq_A Acetyl xylan esterase; 99.9 3.3E-22 1.1E-26 215.5 20.5 242 567-826 72-335 (337)
25 3bjr_A Putative carboxylestera 99.9 1.5E-22 5E-27 212.4 16.6 225 570-824 26-282 (283)
26 3hlk_A Acyl-coenzyme A thioest 99.9 3.4E-22 1.2E-26 223.3 20.3 234 575-826 160-428 (446)
27 3ebl_A Gibberellin receptor GI 99.9 3.7E-22 1.3E-26 216.8 19.5 238 567-826 68-352 (365)
28 3pfb_A Cinnamoyl esterase; alp 99.9 5E-22 1.7E-26 206.3 19.4 241 569-824 27-267 (270)
29 2i3d_A AGR_C_3351P, hypothetic 99.9 6.9E-21 2.4E-25 195.6 26.8 202 569-826 29-234 (249)
30 2o2g_A Dienelactone hydrolase; 99.9 1.5E-21 5.2E-26 196.2 20.7 201 572-826 20-223 (223)
31 1zi8_A Carboxymethylenebutenol 99.9 9.2E-22 3.2E-26 199.9 19.0 208 568-826 8-233 (236)
32 2gop_A Trilobed protease; beta 99.9 5.6E-21 1.9E-25 206.5 26.2 304 107-519 23-330 (347)
33 2hqs_A Protein TOLB; TOLB, PAL 99.9 5E-21 1.7E-25 212.4 26.2 244 163-522 141-387 (415)
34 4a5s_A Dipeptidyl peptidase 4 99.9 6.5E-21 2.2E-25 227.9 28.3 312 101-522 21-400 (740)
35 3ga7_A Acetyl esterase; phosph 99.9 1.9E-21 6.5E-26 208.4 21.0 227 567-825 67-322 (326)
36 3fak_A Esterase/lipase, ESTE5; 99.9 2.1E-21 7.2E-26 207.5 21.0 224 575-825 66-308 (322)
37 4fbl_A LIPS lipolytic enzyme; 99.9 8E-22 2.7E-26 206.6 17.4 222 590-824 49-281 (281)
38 1l7a_A Cephalosporin C deacety 99.9 2.3E-21 7.9E-26 206.5 21.0 241 567-826 60-317 (318)
39 3fcy_A Xylan esterase 1; alpha 99.9 1.2E-21 4E-26 212.0 18.4 241 567-824 86-344 (346)
40 3ksr_A Putative serine hydrola 99.9 2E-22 6.9E-27 212.0 11.4 228 572-825 14-241 (290)
41 2ecf_A Dipeptidyl peptidase IV 99.9 7.3E-20 2.5E-24 219.2 32.3 311 98-520 38-413 (741)
42 2hdw_A Hypothetical protein PA 99.9 5.6E-21 1.9E-25 208.3 20.5 247 567-825 72-367 (367)
43 3trd_A Alpha/beta hydrolase; c 99.9 2.4E-20 8.1E-25 185.7 22.7 195 567-821 10-207 (208)
44 2zsh_A Probable gibberellin re 99.9 2E-20 6.7E-25 202.7 23.7 231 574-824 81-351 (351)
45 1mpx_A Alpha-amino acid ester 99.9 1.8E-21 6.1E-26 225.6 16.0 254 567-826 29-355 (615)
46 3c5m_A Oligogalacturonate lyas 99.9 1.1E-20 3.8E-25 207.9 20.7 313 101-524 40-386 (396)
47 3hju_A Monoglyceride lipase; a 99.9 2.7E-20 9.3E-25 200.6 23.0 245 567-825 39-312 (342)
48 3pe6_A Monoglyceride lipase; a 99.9 5E-20 1.7E-24 193.9 24.1 240 567-825 21-294 (303)
49 3fcx_A FGH, esterase D, S-form 99.9 3.1E-21 1.1E-25 202.0 14.5 231 570-826 24-281 (282)
50 2b9v_A Alpha-amino acid ester 99.8 1.1E-20 3.6E-25 219.7 19.7 254 567-826 41-367 (652)
51 3vis_A Esterase; alpha/beta-hy 99.8 1.5E-20 5E-25 199.5 19.1 185 578-826 85-276 (306)
52 1jfr_A Lipase; serine hydrolas 99.8 2.7E-20 9.2E-25 192.7 20.4 188 577-826 40-232 (262)
53 3i6y_A Esterase APC40077; lipa 99.8 5.8E-21 2E-25 199.8 15.4 231 570-826 25-279 (280)
54 3h04_A Uncharacterized protein 99.8 1.2E-19 4.1E-24 188.1 25.1 233 567-826 7-274 (275)
55 2hm7_A Carboxylesterase; alpha 99.8 5.7E-21 1.9E-25 203.2 15.2 227 571-826 56-310 (310)
56 2fuk_A XC6422 protein; A/B hyd 99.8 7.6E-20 2.6E-24 183.6 22.5 199 569-826 16-217 (220)
57 1vkh_A Putative serine hydrola 99.8 4.8E-21 1.6E-25 199.7 13.4 210 588-821 37-272 (273)
58 3pe7_A Oligogalacturonate lyas 99.8 2.9E-20 9.8E-25 204.2 20.2 289 137-523 19-330 (388)
59 1lzl_A Heroin esterase; alpha/ 99.8 5E-20 1.7E-24 197.1 21.5 237 568-826 56-317 (323)
60 4e15_A Kynurenine formamidase; 99.8 4.3E-21 1.5E-25 203.4 12.7 199 576-803 68-280 (303)
61 3llc_A Putative hydrolase; str 99.8 7.6E-20 2.6E-24 189.3 21.7 240 569-824 18-269 (270)
62 3k6k_A Esterase/lipase; alpha/ 99.8 7.8E-20 2.7E-24 195.4 22.3 222 572-826 66-309 (322)
63 1xfd_A DIP, dipeptidyl aminope 99.8 1.6E-19 5.6E-24 215.6 27.5 315 99-521 19-394 (723)
64 2wir_A Pesta, alpha/beta hydro 99.8 9.8E-21 3.4E-25 201.7 14.7 229 570-826 58-312 (313)
65 3ain_A 303AA long hypothetical 99.8 4.7E-20 1.6E-24 196.9 19.6 228 574-825 75-320 (323)
66 3ls2_A S-formylglutathione hyd 99.8 3.6E-20 1.2E-24 193.7 18.0 233 571-826 24-279 (280)
67 2o7r_A CXE carboxylesterase; a 99.8 8.4E-21 2.9E-25 204.6 13.4 232 574-825 64-331 (338)
68 3fnb_A Acylaminoacyl peptidase 99.8 3.4E-20 1.2E-24 204.9 18.6 239 572-826 143-402 (405)
69 3qh4_A Esterase LIPW; structur 99.8 1.3E-20 4.5E-25 200.8 14.7 230 567-826 64-316 (317)
70 3e4d_A Esterase D; S-formylglu 99.8 1.9E-20 6.6E-25 195.6 14.9 234 570-826 23-278 (278)
71 4h0c_A Phospholipase/carboxyle 99.8 1.1E-20 3.8E-25 187.9 12.1 189 589-823 19-210 (210)
72 2c7b_A Carboxylesterase, ESTE1 99.8 4.1E-20 1.4E-24 196.6 17.3 231 571-826 56-309 (311)
73 1jkm_A Brefeldin A esterase; s 99.8 2.8E-20 9.4E-25 202.2 15.9 236 568-825 87-358 (361)
74 1ufo_A Hypothetical protein TT 99.8 1.1E-19 3.8E-24 184.3 19.0 210 576-825 13-235 (238)
75 3og9_A Protein YAHD A copper i 99.8 1.7E-19 5.7E-24 179.8 19.6 191 580-824 8-208 (209)
76 1fj2_A Protein (acyl protein t 99.8 1E-19 3.6E-24 184.1 18.2 195 580-826 14-229 (232)
77 1lns_A X-prolyl dipeptidyl ami 99.8 1.3E-19 4.6E-24 213.5 21.0 246 569-826 179-522 (763)
78 3dkr_A Esterase D; alpha beta 99.8 7.3E-20 2.5E-24 187.1 16.0 219 590-825 20-249 (251)
79 1z68_A Fibroblast activation p 99.8 2.5E-19 8.5E-24 213.8 23.0 311 101-521 20-392 (719)
80 2pbl_A Putative esterase/lipas 99.8 7.2E-20 2.4E-24 189.4 15.5 193 573-807 48-247 (262)
81 3bdi_A Uncharacterized protein 99.8 4.6E-19 1.6E-23 175.8 20.7 194 570-823 10-206 (207)
82 2ojh_A Uncharacterized protein 99.8 3.9E-18 1.3E-22 178.6 27.7 263 124-510 19-294 (297)
83 1auo_A Carboxylesterase; hydro 99.8 3.7E-19 1.3E-23 178.1 18.7 197 580-826 5-218 (218)
84 4f0j_A Probable hydrolytic enz 99.8 1.5E-18 5.2E-23 183.8 24.2 239 572-824 28-314 (315)
85 3cn9_A Carboxylesterase; alpha 99.8 1.1E-18 3.8E-23 176.0 21.9 184 588-825 20-226 (226)
86 3rm3_A MGLP, thermostable mono 99.8 6.3E-19 2.1E-23 182.9 20.0 219 591-825 39-269 (270)
87 3d7r_A Esterase; alpha/beta fo 99.8 1.3E-18 4.4E-23 186.3 22.5 220 576-826 84-323 (326)
88 2uz0_A Esterase, tributyrin es 99.8 1.6E-19 5.5E-24 186.7 14.1 231 571-826 16-257 (263)
89 4b6g_A Putative esterase; hydr 99.8 1.8E-19 6.3E-24 188.7 14.6 230 570-826 30-283 (283)
90 1k32_A Tricorn protease; prote 99.8 7.4E-18 2.5E-22 209.3 30.0 329 97-509 53-493 (1045)
91 4fhz_A Phospholipase/carboxyle 99.8 5.2E-19 1.8E-23 183.8 16.5 197 580-825 56-266 (285)
92 1jjf_A Xylanase Z, endo-1,4-be 99.8 1.1E-18 3.6E-23 181.4 18.8 206 572-824 42-260 (268)
93 3b5e_A MLL8374 protein; NP_108 99.8 8.3E-19 2.8E-23 176.6 17.0 197 574-825 16-217 (223)
94 2h1i_A Carboxylesterase; struc 99.8 1.6E-18 5.5E-23 174.8 19.0 185 590-825 36-226 (226)
95 3u0v_A Lysophospholipase-like 99.8 5E-18 1.7E-22 172.8 22.4 194 589-826 20-232 (239)
96 3mve_A FRSA, UPF0255 protein V 99.8 1.3E-18 4.4E-23 192.0 18.8 230 572-826 176-414 (415)
97 1k8q_A Triacylglycerol lipase, 99.8 6.7E-19 2.3E-23 192.2 16.1 250 568-824 32-377 (377)
98 1jji_A Carboxylesterase; alpha 99.8 3.3E-19 1.1E-23 189.5 13.4 223 575-823 67-310 (311)
99 3d0k_A Putative poly(3-hydroxy 99.8 2.2E-18 7.5E-23 182.6 19.3 216 570-823 34-286 (304)
100 2r8b_A AGR_C_4453P, uncharacte 99.8 9.8E-19 3.3E-23 179.6 16.0 185 590-826 60-249 (251)
101 2qjw_A Uncharacterized protein 99.8 3E-18 1E-22 165.3 18.4 174 590-823 2-175 (176)
102 3c5m_A Oligogalacturonate lyas 99.8 1.9E-18 6.4E-23 190.0 18.3 261 156-523 38-330 (396)
103 4ezi_A Uncharacterized protein 99.8 6E-18 2E-22 182.7 21.6 251 566-826 48-371 (377)
104 2y6u_A Peroxisomal membrane pr 99.8 2.3E-18 7.8E-23 189.8 18.0 249 567-825 24-345 (398)
105 2fx5_A Lipase; alpha-beta hydr 99.8 3.2E-18 1.1E-22 176.7 17.8 184 578-825 34-228 (258)
106 1imj_A CIB, CCG1-interacting f 99.8 8E-19 2.7E-23 174.7 11.4 193 571-824 14-209 (210)
107 1tht_A Thioesterase; 2.10A {Vi 99.8 7.8E-18 2.7E-22 178.0 19.2 221 569-805 13-244 (305)
108 3r0v_A Alpha/beta hydrolase fo 99.8 2.5E-17 8.6E-22 169.5 22.5 222 568-823 7-262 (262)
109 3ia2_A Arylesterase; alpha-bet 99.8 1.1E-17 3.8E-22 173.7 19.7 231 569-823 4-271 (271)
110 1qlw_A Esterase; anisotropic r 99.8 1E-17 3.6E-22 179.2 20.0 199 576-825 50-321 (328)
111 2ojh_A Uncharacterized protein 99.8 5.7E-17 1.9E-21 169.7 24.8 249 99-465 44-293 (297)
112 2qru_A Uncharacterized protein 99.8 5.6E-17 1.9E-21 168.9 23.9 228 572-824 13-274 (274)
113 2pl5_A Homoserine O-acetyltran 99.8 4.1E-17 1.4E-21 177.4 23.1 245 572-824 29-365 (366)
114 3azo_A Aminopeptidase; POP fam 99.8 1.3E-17 4.4E-22 196.9 20.4 272 154-523 24-326 (662)
115 3kxp_A Alpha-(N-acetylaminomet 99.8 1.2E-17 4E-22 177.6 18.0 210 592-823 68-314 (314)
116 3v48_A Aminohydrolase, putativ 99.8 5.5E-18 1.9E-22 175.9 15.0 219 590-825 13-261 (268)
117 3fob_A Bromoperoxidase; struct 99.8 2.2E-17 7.6E-22 172.6 19.4 212 592-822 27-280 (281)
118 1brt_A Bromoperoxidase A2; hal 99.8 1.5E-17 5.3E-22 173.4 18.0 213 593-822 24-276 (277)
119 1a88_A Chloroperoxidase L; hal 99.7 8E-17 2.7E-21 167.6 23.1 231 570-822 5-274 (275)
120 3sty_A Methylketone synthase 1 99.7 1.3E-17 4.3E-22 172.4 16.8 221 589-824 9-266 (267)
121 1tqh_A Carboxylesterase precur 99.7 1.7E-17 5.7E-22 170.0 17.5 216 592-824 16-245 (247)
122 1a8s_A Chloroperoxidase F; hal 99.7 8E-17 2.7E-21 167.3 22.9 215 592-822 19-272 (273)
123 3o4h_A Acylamino-acid-releasin 99.7 8.8E-18 3E-22 195.1 17.2 234 156-510 24-267 (582)
124 4fle_A Esterase; structural ge 99.7 1.2E-17 4.2E-22 165.2 15.8 187 592-822 2-190 (202)
125 1zoi_A Esterase; alpha/beta hy 99.7 4.9E-17 1.7E-21 169.4 21.1 229 571-822 7-275 (276)
126 1a8q_A Bromoperoxidase A1; hal 99.7 5.6E-17 1.9E-21 168.6 21.4 216 592-822 19-273 (274)
127 1sfr_A Antigen 85-A; alpha/bet 99.7 1.2E-17 4.3E-22 176.6 16.6 241 573-826 20-284 (304)
128 3dqz_A Alpha-hydroxynitrIle ly 99.7 1.4E-17 4.7E-22 171.1 16.0 218 593-825 5-258 (258)
129 1q0r_A RDMC, aclacinomycin met 99.7 4.3E-17 1.5E-21 172.0 20.2 231 571-825 8-294 (298)
130 3iii_A COCE/NOND family hydrol 99.7 5.2E-18 1.8E-22 192.2 13.8 242 567-826 45-321 (560)
131 2yys_A Proline iminopeptidase- 99.7 2.6E-17 8.8E-22 172.6 18.2 230 571-824 10-276 (286)
132 3vdx_A Designed 16NM tetrahedr 99.7 8.2E-17 2.8E-21 180.2 23.4 232 568-825 8-280 (456)
133 3i2k_A Cocaine esterase; alpha 99.7 8.7E-18 3E-22 193.2 15.1 244 567-826 13-323 (587)
134 3u1t_A DMMA haloalkane dehalog 99.7 2.8E-17 9.5E-22 173.5 17.8 227 572-825 17-297 (309)
135 3om8_A Probable hydrolase; str 99.7 1.7E-17 5.8E-22 172.0 15.8 227 569-822 10-265 (266)
136 2z3z_A Dipeptidyl aminopeptida 99.7 3.3E-16 1.1E-20 186.4 29.0 263 155-523 83-392 (706)
137 2ocg_A Valacyclovir hydrolase; 99.7 9.3E-17 3.2E-21 165.0 20.6 210 593-821 24-253 (254)
138 4f21_A Carboxylesterase/phosph 99.7 9.5E-17 3.2E-21 163.3 20.3 203 576-826 25-245 (246)
139 3nwo_A PIP, proline iminopepti 99.7 3.7E-17 1.3E-21 175.3 18.1 236 572-824 36-322 (330)
140 2puj_A 2-hydroxy-6-OXO-6-pheny 99.7 2.2E-17 7.7E-22 173.1 15.8 217 592-823 33-285 (286)
141 3qvm_A OLEI00960; structural g 99.7 5.4E-18 1.8E-22 176.3 11.0 219 593-825 29-279 (282)
142 4dnp_A DAD2; alpha/beta hydrol 99.7 5.6E-18 1.9E-22 174.9 11.1 221 591-824 19-269 (269)
143 3qit_A CURM TE, polyketide syn 99.7 3.6E-17 1.2E-21 170.1 17.3 211 570-805 10-272 (286)
144 2r11_A Carboxylesterase NP; 26 99.7 7.3E-17 2.5E-21 170.9 19.9 229 570-823 51-306 (306)
145 2xua_A PCAD, 3-oxoadipate ENOL 99.7 2E-17 6.7E-22 171.5 14.8 228 572-823 10-264 (266)
146 1mtz_A Proline iminopeptidase; 99.7 7.8E-18 2.7E-22 177.1 11.7 232 572-825 13-293 (293)
147 1r88_A MPT51/MPB51 antigen; AL 99.7 3.6E-17 1.2E-21 170.8 16.5 232 572-824 21-272 (280)
148 1iup_A META-cleavage product h 99.7 2.9E-17 1E-21 171.8 15.6 215 592-823 25-272 (282)
149 1k32_A Tricorn protease; prote 99.7 1.6E-16 5.5E-21 197.3 24.9 339 100-522 18-461 (1045)
150 3fsg_A Alpha/beta superfamily 99.7 1.5E-17 5.3E-22 171.9 13.1 218 591-825 20-269 (272)
151 1c4x_A BPHD, protein (2-hydrox 99.7 7.5E-17 2.6E-21 168.9 18.5 231 572-823 15-284 (285)
152 3oos_A Alpha/beta hydrolase fa 99.7 2.5E-17 8.6E-22 170.8 14.6 214 591-820 22-277 (278)
153 3i1i_A Homoserine O-acetyltran 99.7 9.7E-18 3.3E-22 182.9 11.8 234 589-825 39-373 (377)
154 3d59_A Platelet-activating fac 99.7 2.1E-17 7.2E-22 181.0 14.3 192 588-826 94-351 (383)
155 2qm0_A BES; alpha-beta structu 99.7 1.1E-17 3.6E-22 174.4 11.3 217 572-821 28-272 (275)
156 2wue_A 2-hydroxy-6-OXO-6-pheny 99.7 6.9E-17 2.4E-21 169.8 16.3 231 572-823 21-289 (291)
157 1hkh_A Gamma lactamase; hydrol 99.7 5.7E-17 1.9E-21 169.1 15.5 213 593-822 24-278 (279)
158 1gkl_A Endo-1,4-beta-xylanase 99.7 3.9E-16 1.3E-20 164.1 21.7 190 575-804 52-272 (297)
159 2qs9_A Retinoblastoma-binding 99.7 5.3E-17 1.8E-21 159.5 14.1 181 591-825 3-186 (194)
160 3hss_A Putative bromoperoxidas 99.7 6.9E-17 2.4E-21 169.4 15.5 216 591-824 42-291 (293)
161 3h2g_A Esterase; xanthomonas o 99.7 5.9E-17 2E-21 178.3 15.6 133 572-709 59-212 (397)
162 3g8y_A SUSD/RAGB-associated es 99.7 5.9E-17 2E-21 177.6 15.5 140 567-709 91-262 (391)
163 3e0x_A Lipase-esterase related 99.7 1.1E-16 3.9E-21 162.5 16.0 207 590-820 14-244 (245)
164 3bf7_A Esterase YBFF; thioeste 99.7 6.3E-17 2.1E-21 166.5 14.0 215 591-824 15-255 (255)
165 3r40_A Fluoroacetate dehalogen 99.7 2.9E-16 1E-20 165.3 19.2 234 570-824 19-303 (306)
166 1u2e_A 2-hydroxy-6-ketonona-2, 99.7 1.3E-16 4.3E-21 167.6 16.1 214 593-823 37-288 (289)
167 1j1i_A META cleavage compound 99.7 2.6E-16 9.1E-21 165.8 18.4 217 592-825 36-283 (296)
168 2b61_A Homoserine O-acetyltran 99.7 1.9E-16 6.4E-21 173.0 17.0 246 572-824 42-377 (377)
169 2wfl_A Polyneuridine-aldehyde 99.7 2.2E-16 7.6E-21 163.4 16.6 218 590-822 8-263 (264)
170 3nuz_A Putative acetyl xylan e 99.7 1.2E-16 4.3E-21 175.4 15.2 140 567-709 96-267 (398)
171 2xt0_A Haloalkane dehalogenase 99.7 6.6E-16 2.2E-20 162.8 20.2 229 574-822 33-296 (297)
172 3p2m_A Possible hydrolase; alp 99.7 8.2E-17 2.8E-21 172.5 13.4 212 592-823 81-329 (330)
173 1b6g_A Haloalkane dehalogenase 99.7 4.5E-16 1.5E-20 165.2 18.7 228 574-823 34-308 (310)
174 3g9x_A Haloalkane dehalogenase 99.7 6.4E-17 2.2E-21 170.0 12.0 225 572-823 18-292 (299)
175 4g9e_A AHL-lactonase, alpha/be 99.7 3.4E-17 1.2E-21 170.0 9.3 216 591-824 23-269 (279)
176 1uxo_A YDEN protein; hydrolase 99.7 5.1E-16 1.7E-20 152.0 17.0 180 592-822 4-188 (192)
177 3i28_A Epoxide hydrolase 2; ar 99.7 3.1E-16 1E-20 180.6 17.8 232 571-825 245-546 (555)
178 3afi_E Haloalkane dehalogenase 99.7 2.8E-16 9.6E-21 167.3 15.9 229 572-824 15-301 (316)
179 2e3j_A Epoxide hydrolase EPHB; 99.7 6.8E-16 2.3E-20 167.3 19.1 122 571-706 10-131 (356)
180 3bwx_A Alpha/beta hydrolase; Y 99.7 7.5E-16 2.6E-20 161.2 18.7 231 569-823 11-284 (285)
181 2xmz_A Hydrolase, alpha/beta h 99.7 3.3E-16 1.1E-20 162.5 15.6 212 593-824 17-266 (269)
182 1xkl_A SABP2, salicylic acid-b 99.7 5.6E-16 1.9E-20 161.2 17.2 217 592-824 4-259 (273)
183 1dqz_A 85C, protein (antigen 8 99.7 4.4E-16 1.5E-20 162.6 16.1 224 593-825 30-278 (280)
184 2vat_A Acetyl-COA--deacetylcep 99.7 8.1E-17 2.8E-21 180.2 10.8 228 591-826 108-444 (444)
185 3guu_A Lipase A; protein struc 99.7 4.2E-15 1.4E-19 162.5 23.4 245 566-825 80-406 (462)
186 2cjp_A Epoxide hydrolase; HET: 99.7 1.5E-15 5.2E-20 162.4 19.6 120 572-705 19-138 (328)
187 1l0q_A Surface layer protein; 99.7 1.3E-14 4.5E-19 159.0 27.1 242 155-523 33-276 (391)
188 1wm1_A Proline iminopeptidase; 99.7 3.8E-15 1.3E-19 158.3 22.1 229 572-821 23-315 (317)
189 2xdw_A Prolyl endopeptidase; a 99.7 2.1E-15 7.2E-20 179.3 22.1 267 161-521 79-367 (710)
190 3c6x_A Hydroxynitrilase; atomi 99.7 4.6E-16 1.6E-20 160.2 14.3 215 592-824 3-256 (257)
191 2rau_A Putative esterase; NP_3 99.7 1.2E-16 4.3E-21 172.9 10.4 225 590-824 48-353 (354)
192 1wom_A RSBQ, sigma factor SIGB 99.7 1.3E-16 4.4E-21 165.8 9.9 219 593-825 21-271 (271)
193 3kda_A CFTR inhibitory factor 99.7 5.4E-16 1.9E-20 163.2 14.6 227 570-824 16-294 (301)
194 1ehy_A Protein (soluble epoxid 99.7 3.3E-15 1.1E-19 157.2 20.0 228 572-821 17-293 (294)
195 3vgz_A Uncharacterized protein 99.7 9.4E-14 3.2E-18 149.6 32.0 283 101-508 45-334 (353)
196 2gop_A Trilobed protease; beta 99.7 1.1E-15 3.8E-20 164.7 16.4 248 155-519 16-290 (347)
197 2qvb_A Haloalkane dehalogenase 99.6 3.3E-16 1.1E-20 164.3 11.9 226 572-824 16-292 (297)
198 1yr2_A Prolyl oligopeptidase; 99.6 3.3E-15 1.1E-19 178.4 21.9 270 156-521 109-394 (741)
199 2bkl_A Prolyl endopeptidase; m 99.6 3.5E-15 1.2E-19 176.9 21.8 269 157-521 71-350 (695)
200 3fla_A RIFR; alpha-beta hydrol 99.6 4.4E-16 1.5E-20 160.9 12.1 218 588-824 16-249 (267)
201 3bdv_A Uncharacterized protein 99.6 4.3E-15 1.5E-19 145.3 18.4 171 591-825 16-188 (191)
202 1isp_A Lipase; alpha/beta hydr 99.6 2.5E-15 8.6E-20 145.6 16.4 169 592-824 3-176 (181)
203 1mj5_A 1,3,4,6-tetrachloro-1,4 99.6 1E-15 3.5E-20 161.1 13.0 228 571-825 16-294 (302)
204 1azw_A Proline iminopeptidase; 99.6 8.9E-15 3E-19 155.2 20.3 117 572-705 20-136 (313)
205 3ibt_A 1H-3-hydroxy-4-oxoquino 99.6 3.3E-15 1.1E-19 154.0 16.2 224 572-822 7-263 (264)
206 2qmq_A Protein NDRG2, protein 99.6 1.5E-15 5E-20 159.0 13.3 235 570-822 17-285 (286)
207 3iuj_A Prolyl endopeptidase; h 99.6 3.7E-14 1.3E-18 167.8 26.8 267 99-487 131-415 (693)
208 1ycd_A Hypothetical 27.3 kDa p 99.6 3.3E-15 1.1E-19 152.3 15.2 206 590-826 3-239 (243)
209 3c8d_A Enterochelin esterase; 99.6 1.5E-15 5.2E-20 166.3 13.3 213 572-825 178-398 (403)
210 3u4y_A Uncharacterized protein 99.6 2.9E-13 9.9E-18 144.5 30.4 243 158-522 44-304 (331)
211 1m33_A BIOH protein; alpha-bet 99.6 8.2E-16 2.8E-20 158.3 10.0 207 594-823 15-255 (258)
212 2q0x_A Protein DUF1749, unchar 99.6 4.9E-15 1.7E-19 158.8 16.4 207 591-824 37-294 (335)
213 1r3d_A Conserved hypothetical 99.6 3.1E-15 1.1E-19 154.6 13.8 210 592-825 16-263 (264)
214 1pja_A Palmitoyl-protein thioe 99.6 4E-15 1.4E-19 157.0 14.6 216 589-821 33-301 (302)
215 2gzs_A IROE protein; enterobac 99.6 3E-15 1E-19 155.7 13.1 211 573-823 24-264 (278)
216 2psd_A Renilla-luciferin 2-mon 99.6 6.2E-15 2.1E-19 157.0 15.4 211 591-824 42-305 (318)
217 3hfq_A Uncharacterized protein 99.6 1E-13 3.4E-18 149.4 25.1 266 104-484 47-326 (347)
218 3l80_A Putative uncharacterize 99.6 6.6E-16 2.3E-20 162.0 7.5 215 592-825 41-290 (292)
219 1gxr_A ESG1, transducin-like e 99.6 3.6E-14 1.2E-18 151.5 20.3 269 154-507 52-326 (337)
220 1nr0_A Actin interacting prote 99.6 2.4E-13 8.1E-18 158.6 28.3 314 104-499 26-379 (611)
221 3b12_A Fluoroacetate dehalogen 99.4 1.6E-16 5.5E-21 167.2 0.0 220 591-824 24-292 (304)
222 3u4y_A Uncharacterized protein 99.6 8.6E-13 3E-17 140.8 29.1 258 101-486 44-313 (331)
223 1pby_B Quinohemoprotein amine 99.6 4.5E-13 1.6E-17 143.0 25.5 261 156-523 36-311 (337)
224 4gqb_B Methylosome protein 50; 99.5 2.8E-12 9.4E-17 137.9 30.3 234 154-510 83-322 (344)
225 3s25_A Hypothetical 7-bladed b 99.5 4.2E-13 1.5E-17 140.2 23.0 261 105-522 22-293 (302)
226 2ymu_A WD-40 repeat protein; u 99.5 2.3E-13 7.8E-18 157.5 21.7 264 154-506 304-568 (577)
227 3vgz_A Uncharacterized protein 99.5 3.6E-12 1.2E-16 137.1 29.7 249 155-522 42-303 (353)
228 3bws_A Protein LP49; two-domai 99.5 2E-13 6.9E-18 151.7 20.3 290 156-520 125-430 (433)
229 1l0q_A Surface layer protein; 99.5 8.1E-13 2.8E-17 144.7 24.9 245 102-484 37-282 (391)
230 2xe4_A Oligopeptidase B; hydro 99.5 2.6E-13 8.8E-18 161.6 21.7 255 161-520 122-398 (751)
231 2wj6_A 1H-3-hydroxy-4-oxoquina 99.5 2.2E-14 7.6E-19 149.3 10.7 213 592-823 27-271 (276)
232 1ri6_A Putative isomerase YBHE 99.5 2.2E-12 7.5E-17 138.0 26.7 259 104-484 45-317 (343)
233 1qe3_A PNB esterase, para-nitr 99.5 2.7E-15 9.4E-20 168.1 3.8 224 576-806 83-316 (489)
234 3qmv_A Thioesterase, REDJ; alp 99.5 1.6E-14 5.3E-19 150.7 9.1 213 591-820 50-279 (280)
235 1gxr_A ESG1, transducin-like e 99.5 8.2E-13 2.8E-17 140.9 22.3 275 104-473 59-335 (337)
236 4h5i_A Guanine nucleotide-exch 99.5 1.1E-12 3.9E-17 142.3 23.5 253 106-474 81-342 (365)
237 1r5m_A SIR4-interacting protei 99.5 1E-12 3.5E-17 145.1 22.9 265 154-506 109-413 (425)
238 3scy_A Hypothetical bacterial 99.5 1.1E-11 3.6E-16 134.3 30.3 270 126-508 26-326 (361)
239 3zwl_B Eukaryotic translation 99.5 8.2E-12 2.8E-16 134.8 29.1 281 103-522 39-346 (369)
240 4i19_A Epoxide hydrolase; stru 99.5 2E-13 7E-18 148.8 16.2 121 571-706 75-204 (388)
241 1ri6_A Putative isomerase YBHE 99.5 1.2E-11 4.3E-16 132.1 30.0 245 155-507 39-296 (343)
242 3hfq_A Uncharacterized protein 99.5 8.7E-12 3E-16 134.1 28.8 276 127-520 16-315 (347)
243 3qyj_A ALR0039 protein; alpha/ 99.5 4.9E-13 1.7E-17 140.2 17.8 119 571-705 12-130 (291)
244 4g56_B MGC81050 protein; prote 99.5 3E-13 1E-17 146.4 16.6 288 154-521 43-342 (357)
245 2ymu_A WD-40 repeat protein; u 99.5 1.3E-12 4.3E-17 151.2 22.8 264 154-506 263-527 (577)
246 3fm0_A Protein CIAO1; WDR39,SG 99.5 4.2E-12 1.4E-16 136.7 25.4 289 155-511 18-327 (345)
247 1nr0_A Actin interacting prote 99.5 2.6E-12 8.7E-17 149.9 25.3 186 104-318 67-259 (611)
248 3ow8_A WD repeat-containing pr 99.5 2.6E-12 8.9E-17 136.8 22.6 269 154-506 33-309 (321)
249 3c5v_A PME-1, protein phosphat 99.5 6.1E-13 2.1E-17 141.3 16.5 105 591-705 37-145 (316)
250 3s25_A Hypothetical 7-bladed b 99.5 1.9E-12 6.6E-17 135.2 19.8 236 160-523 20-256 (302)
251 2vdu_B TRNA (guanine-N(7)-)-me 99.5 1.5E-11 5E-16 137.7 28.3 261 155-520 104-391 (450)
252 3gff_A IROE-like serine hydrol 99.5 7.2E-14 2.4E-18 148.1 8.8 195 573-805 23-250 (331)
253 3scy_A Hypothetical bacterial 99.5 3.3E-12 1.1E-16 138.3 22.2 267 103-485 56-347 (361)
254 2pm9_A Protein WEB1, protein t 99.5 3.8E-12 1.3E-16 140.3 23.1 294 103-479 19-339 (416)
255 1got_B GT-beta; complex (GTP-b 99.5 3.5E-12 1.2E-16 137.0 21.8 268 154-506 56-331 (340)
256 3pic_A CIP2; alpha/beta hydrol 99.4 2.1E-12 7.2E-17 134.4 18.2 218 572-826 88-346 (375)
257 3ow8_A WD repeat-containing pr 99.4 2.1E-12 7.2E-17 137.5 18.5 236 154-472 81-318 (321)
258 4g56_B MGC81050 protein; prote 99.4 1.1E-12 3.8E-17 141.9 15.3 286 104-474 50-342 (357)
259 1erj_A Transcriptional repress 99.4 1.1E-11 3.7E-16 136.1 22.0 275 154-497 65-362 (393)
260 3zwl_B Eukaryotic translation 99.4 2.7E-11 9.2E-16 130.8 24.8 245 154-509 33-281 (369)
261 1jof_A Carboxy-CIS,CIS-muconat 99.4 5.4E-11 1.9E-15 129.0 27.1 295 128-521 15-340 (365)
262 3iz6_a 40S ribosomal protein R 99.4 6.1E-11 2.1E-15 129.4 27.5 277 154-504 67-361 (380)
263 3i2n_A WD repeat-containing pr 99.4 2.7E-11 9.1E-16 130.3 24.0 293 103-521 25-352 (357)
264 4ery_A WD repeat-containing pr 99.4 3.3E-11 1.1E-15 127.4 24.3 274 154-511 24-303 (312)
265 4h5i_A Guanine nucleotide-exch 99.4 1.8E-11 6E-16 132.9 22.6 198 104-414 141-344 (365)
266 3fle_A SE_1780 protein; struct 99.4 4.7E-12 1.6E-16 128.2 16.6 211 592-821 6-247 (249)
267 3vl1_A 26S proteasome regulato 99.4 2.9E-11 1E-15 133.5 23.7 273 156-508 100-409 (420)
268 4gqb_B Methylosome protein 50; 99.4 2.4E-11 8.1E-16 130.6 22.2 199 154-474 128-330 (344)
269 3fm0_A Protein CIAO1; WDR39,SG 99.4 2E-11 6.8E-16 131.3 21.5 303 102-474 22-334 (345)
270 4g4g_A 4-O-methyl-glucuronoyl 99.4 8.5E-12 2.9E-16 131.0 17.7 216 573-826 122-380 (433)
271 2pbi_B Guanine nucleotide-bind 99.4 2.8E-11 9.7E-16 130.7 22.6 269 154-506 65-345 (354)
272 1got_B GT-beta; complex (GTP-b 99.4 2.7E-11 9.3E-16 130.0 21.7 271 104-471 63-339 (340)
273 3lcr_A Tautomycetin biosynthet 99.4 2.3E-12 8E-17 136.8 12.4 215 589-824 78-302 (319)
274 2d81_A PHB depolymerase; alpha 99.4 1.1E-12 3.8E-17 137.2 9.6 149 666-825 6-176 (318)
275 2ynn_A Coatomer subunit beta'; 99.4 5.6E-11 1.9E-15 125.3 22.5 263 154-501 14-284 (304)
276 3ei3_B DNA damage-binding prot 99.3 6E-11 2E-15 129.4 23.3 290 154-520 74-380 (383)
277 1vyh_C Platelet-activating fac 99.3 6.8E-11 2.3E-15 130.5 23.9 266 154-505 109-398 (410)
278 4fol_A FGH, S-formylglutathion 99.3 2.4E-12 8.2E-17 134.0 11.3 233 572-826 24-297 (299)
279 3bws_A Protein LP49; two-domai 99.3 3.6E-11 1.2E-15 133.4 21.7 291 159-522 69-390 (433)
280 3ds8_A LIN2722 protein; unkonw 99.3 3.4E-12 1.2E-16 130.8 12.0 210 593-825 4-243 (254)
281 3mkq_A Coatomer beta'-subunit; 99.3 1.8E-11 6.2E-16 147.7 20.4 238 102-416 19-262 (814)
282 1jmx_B Amine dehydrogenase; ox 99.3 6.9E-11 2.4E-15 126.7 22.6 261 159-523 5-326 (349)
283 1vyh_C Platelet-activating fac 99.3 2.7E-11 9.3E-16 133.7 19.1 275 105-472 117-408 (410)
284 3sfz_A APAF-1, apoptotic pepti 99.3 4E-11 1.4E-15 151.9 23.3 235 209-523 963-1208(1249)
285 1k8k_C P40, ARP2/3 complex 41 99.3 3.3E-10 1.1E-14 122.5 27.4 250 104-475 16-274 (372)
286 2j04_A TAU60, YPL007P, hypothe 99.3 3.5E-11 1.2E-15 133.5 19.7 261 154-519 16-296 (588)
287 3g02_A Epoxide hydrolase; alph 99.3 2.9E-11 1E-15 132.2 18.8 120 572-705 93-219 (408)
288 3frx_A Guanine nucleotide-bind 99.3 2.1E-10 7.3E-15 121.7 25.0 243 154-474 66-316 (319)
289 2pm9_A Protein WEB1, protein t 99.3 1.8E-11 6.3E-16 134.8 17.0 293 155-523 14-338 (416)
290 1jof_A Carboxy-CIS,CIS-muconat 99.3 1E-10 3.5E-15 126.8 22.3 256 104-476 47-342 (365)
291 1kez_A Erythronolide synthase; 99.3 5.1E-12 1.7E-16 133.1 11.6 211 588-824 63-281 (300)
292 2j04_A TAU60, YPL007P, hypothe 99.3 1.1E-12 3.9E-17 145.5 6.4 183 154-390 86-286 (588)
293 2pbi_B Guanine nucleotide-bind 99.3 1.2E-10 4E-15 125.8 22.3 269 104-471 72-353 (354)
294 3dwl_C Actin-related protein 2 99.3 8.5E-12 2.9E-16 135.7 13.3 233 155-503 13-267 (377)
295 3lp5_A Putative cell surface h 99.3 1.9E-11 6.3E-16 123.8 14.7 199 593-823 5-233 (250)
296 2xzm_R RACK1; ribosome, transl 99.3 1.1E-10 3.8E-15 125.4 21.3 249 154-474 77-339 (343)
297 4e54_B DNA damage-binding prot 99.3 9.3E-11 3.2E-15 130.5 21.2 279 154-503 120-416 (435)
298 4ery_A WD repeat-containing pr 99.3 1.7E-10 5.9E-15 121.8 22.2 274 103-473 30-310 (312)
299 1ukc_A ESTA, esterase; fungi, 99.3 1.3E-12 4.3E-17 147.5 5.8 218 576-805 86-327 (522)
300 1r5m_A SIR4-interacting protei 99.3 1.3E-10 4.3E-15 128.1 21.6 288 155-522 47-361 (425)
301 3mkq_A Coatomer beta'-subunit; 99.3 4.6E-11 1.6E-15 144.2 19.6 264 154-502 14-285 (814)
302 3frx_A Guanine nucleotide-bind 99.3 1.2E-10 4E-15 123.8 20.5 272 154-507 18-306 (319)
303 3dw8_B Serine/threonine-protei 99.3 2.1E-10 7E-15 127.8 23.3 268 154-484 29-380 (447)
304 1pby_B Quinohemoprotein amine 99.3 9.8E-11 3.3E-15 124.7 19.8 227 180-523 12-270 (337)
305 3vl1_A 26S proteasome regulato 99.3 9.6E-12 3.3E-16 137.4 11.7 279 156-522 59-365 (420)
306 2k2q_B Surfactin synthetase th 99.3 4.5E-12 1.5E-16 128.8 7.7 209 590-824 11-237 (242)
307 3ils_A PKS, aflatoxin biosynth 99.3 3E-11 1E-15 124.7 13.8 212 589-821 18-264 (265)
308 1tca_A Lipase; hydrolase(carbo 99.3 2.1E-11 7.1E-16 128.7 12.7 214 576-823 16-243 (317)
309 1k8k_C P40, ARP2/3 complex 41 99.3 6.3E-10 2.2E-14 120.3 24.9 235 154-503 9-260 (372)
310 3dwl_C Actin-related protein 2 99.3 3.6E-11 1.2E-15 130.7 15.0 211 104-416 19-239 (377)
311 4aez_A CDC20, WD repeat-contai 99.3 5.3E-10 1.8E-14 122.9 24.4 263 124-523 110-381 (401)
312 2xzm_R RACK1; ribosome, transl 99.3 5.3E-10 1.8E-14 120.0 23.6 273 155-506 23-328 (343)
313 1nir_A Nitrite reductase; hemo 99.2 7.2E-10 2.5E-14 126.5 25.4 303 104-523 186-515 (543)
314 1pgu_A Actin interacting prote 99.2 1.1E-09 3.7E-14 127.3 27.2 278 104-521 26-327 (615)
315 2ynn_A Coatomer subunit beta'; 99.2 8.4E-11 2.9E-15 123.9 16.0 235 104-416 21-262 (304)
316 3dm0_A Maltose-binding peripla 99.2 3.4E-10 1.1E-14 134.1 22.8 226 123-416 401-635 (694)
317 2vdu_B TRNA (guanine-N(7)-)-me 99.2 8.9E-10 3E-14 123.1 25.0 175 273-520 125-337 (450)
318 2aq5_A Coronin-1A; WD40 repeat 99.2 5.7E-10 2E-14 122.5 23.1 229 154-502 82-328 (402)
319 3sfz_A APAF-1, apoptotic pepti 99.2 8E-10 2.7E-14 140.0 27.7 239 102-392 621-903 (1249)
320 2mad_H Methylamine dehydrogena 99.2 2.1E-08 7.2E-13 108.5 34.6 259 158-523 70-351 (373)
321 2aq5_A Coronin-1A; WD40 repeat 99.2 5.2E-10 1.8E-14 122.9 20.8 201 211-523 85-300 (402)
322 1jmx_B Amine dehydrogenase; ox 99.2 1.1E-09 3.7E-14 117.3 22.8 115 155-307 44-160 (349)
323 3jrp_A Fusion protein of prote 99.2 2.1E-09 7.2E-14 116.3 25.4 246 154-521 12-286 (379)
324 1erj_A Transcriptional repress 99.2 2E-09 7E-14 117.8 24.8 248 103-474 130-388 (393)
325 3k26_A Polycomb protein EED; W 99.2 8.6E-09 2.9E-13 110.8 29.2 254 154-507 70-355 (366)
326 3ei3_B DNA damage-binding prot 99.2 6.8E-10 2.3E-14 121.0 20.4 288 101-476 78-381 (383)
327 1sq9_A Antiviral protein SKI8; 99.2 5E-10 1.7E-14 122.4 19.0 231 125-416 34-325 (397)
328 2pm7_B Protein transport prote 99.2 2.5E-09 8.6E-14 112.1 23.6 237 154-507 10-274 (297)
329 4aez_A CDC20, WD repeat-contai 99.2 2.9E-09 1E-13 116.9 24.6 239 156-522 96-336 (401)
330 3lrv_A PRE-mRNA-splicing facto 99.2 1.4E-08 4.9E-13 108.7 28.5 163 211-481 129-298 (343)
331 4aow_A Guanine nucleotide-bind 99.1 3.5E-09 1.2E-13 112.8 23.4 287 154-523 39-338 (340)
332 3dm0_A Maltose-binding peripla 99.1 8.6E-10 2.9E-14 130.5 20.2 247 154-482 383-637 (694)
333 1sq9_A Antiviral protein SKI8; 99.1 1.4E-09 5E-14 118.7 20.5 274 154-500 17-367 (397)
334 2pm7_B Protein transport prote 99.1 8.9E-09 3E-13 107.9 24.2 245 104-482 17-291 (297)
335 1yfq_A Cell cycle arrest prote 99.1 3.1E-09 1.1E-13 113.3 21.1 247 154-522 12-282 (342)
336 2h7c_A Liver carboxylesterase 99.1 4.1E-11 1.4E-15 136.0 6.5 129 576-708 99-234 (542)
337 1thg_A Lipase; hydrolase(carbo 99.1 2E-11 6.8E-16 138.4 3.9 221 576-805 106-359 (544)
338 1pgu_A Actin interacting prote 99.1 1.7E-09 6E-14 125.5 20.4 240 154-522 19-283 (615)
339 3jrp_A Fusion protein of prote 99.1 4.2E-09 1.4E-13 113.9 22.1 243 103-475 18-287 (379)
340 4a11_B DNA excision repair pro 99.1 7.6E-08 2.6E-12 105.1 32.4 259 154-523 100-366 (408)
341 3odt_A Protein DOA1; ubiquitin 99.1 6.9E-09 2.4E-13 108.9 23.1 273 154-523 19-297 (313)
342 3dw8_B Serine/threonine-protei 99.1 2.5E-09 8.4E-14 119.0 20.7 156 210-416 180-376 (447)
343 3iz6_a 40S ribosomal protein R 99.1 6.8E-10 2.3E-14 121.0 15.6 279 104-472 74-372 (380)
344 4aow_A Guanine nucleotide-bind 99.1 1.4E-08 4.9E-13 108.0 25.5 248 154-479 87-339 (340)
345 3i2n_A WD repeat-containing pr 99.1 3.6E-09 1.2E-13 113.4 20.5 246 102-473 71-351 (357)
346 3e5z_A Putative gluconolactona 99.1 1.2E-08 4.1E-13 106.8 23.2 252 155-523 29-287 (296)
347 3bg1_A Protein SEC13 homolog; 99.1 2.8E-09 9.6E-14 112.9 18.4 253 154-483 14-300 (316)
348 1nir_A Nitrite reductase; hemo 99.1 1.1E-08 3.9E-13 116.6 24.4 236 160-522 144-402 (543)
349 1yfq_A Cell cycle arrest prote 99.1 2E-08 7E-13 106.9 25.0 277 103-509 18-314 (342)
350 1ei9_A Palmitoyl protein thioe 99.1 1.5E-09 5.1E-14 112.3 15.4 105 594-705 7-115 (279)
351 2hes_X YDR267CP; beta-propelle 99.1 1.8E-08 6.1E-13 107.3 24.2 236 154-507 59-316 (330)
352 1llf_A Lipase 3; candida cylin 99.1 4.3E-11 1.5E-15 135.2 3.8 127 576-705 98-243 (534)
353 2oaj_A Protein SNI1; WD40 repe 99.1 2.2E-08 7.7E-13 121.4 27.5 185 104-342 25-240 (902)
354 2dg1_A DRP35, lactonase; beta 99.0 5.2E-08 1.8E-12 103.7 26.5 259 155-521 46-315 (333)
355 3c75_H MADH, methylamine dehyd 99.0 2.2E-07 7.5E-12 101.2 31.4 300 105-523 81-403 (426)
356 4e54_B DNA damage-binding prot 99.0 4.3E-09 1.5E-13 117.0 18.4 206 211-481 123-331 (435)
357 2xyi_A Probable histone-bindin 99.0 6.8E-09 2.3E-13 115.1 19.9 148 273-474 254-409 (430)
358 3dr2_A Exported gluconolactona 99.0 3.4E-08 1.1E-12 103.9 24.2 252 155-519 46-303 (305)
359 2xyi_A Probable histone-bindin 99.0 1.6E-08 5.4E-13 112.2 22.7 184 273-520 204-408 (430)
360 4gga_A P55CDC, cell division c 99.0 8.8E-08 3E-12 105.7 28.5 244 156-522 108-353 (420)
361 2oiz_A Aromatic amine dehydrog 99.0 2.2E-07 7.6E-12 100.1 30.9 122 377-523 205-335 (361)
362 3g4e_A Regucalcin; six bladed 99.0 8E-08 2.7E-12 100.6 26.7 242 156-509 15-263 (297)
363 2ogt_A Thermostable carboxyles 99.0 4.3E-10 1.5E-14 126.2 9.7 133 571-707 82-224 (498)
364 2ha2_A ACHE, acetylcholinester 99.0 2.3E-10 7.8E-15 129.9 7.3 131 571-706 94-232 (543)
365 3sjl_D Methylamine dehydrogena 99.0 3.9E-07 1.3E-11 97.4 31.4 127 376-523 230-364 (386)
366 2j04_B YDR362CP, TAU91; beta p 99.0 2.8E-09 9.5E-14 120.8 15.7 296 120-500 176-496 (524)
367 4gga_A P55CDC, cell division c 99.0 8.8E-09 3E-13 113.8 19.1 264 127-473 125-393 (420)
368 3mmy_A MRNA export factor; mRN 99.0 2.4E-08 8.4E-13 107.2 22.1 110 154-342 40-158 (368)
369 1gpl_A RP2 lipase; serine este 99.0 1.8E-10 6E-15 127.0 4.8 112 590-706 68-181 (432)
370 3f3f_A Nucleoporin SEH1; struc 99.0 9.2E-08 3.2E-12 101.5 25.6 200 154-474 12-248 (351)
371 3jro_A Fusion protein of prote 99.0 1.5E-08 5E-13 120.9 21.2 235 154-506 10-273 (753)
372 4ggc_A P55CDC, cell division c 99.0 2.8E-08 9.4E-13 104.6 21.0 239 154-472 68-312 (318)
373 3vu4_A KMHSV2; beta-propeller 99.0 4.1E-08 1.4E-12 105.8 22.4 249 154-478 20-272 (355)
374 2ghs_A AGR_C_1268P; regucalcin 99.0 1.3E-07 4.4E-12 100.5 26.0 235 156-509 51-293 (326)
375 3mmy_A MRNA export factor; mRN 99.0 2.6E-08 8.8E-13 107.0 20.3 268 104-463 47-335 (368)
376 1qks_A Cytochrome CD1 nitrite 98.9 4.6E-07 1.6E-11 103.2 31.1 334 104-523 161-539 (567)
377 2oaj_A Protein SNI1; WD40 repe 98.9 5.3E-08 1.8E-12 118.1 24.4 216 154-482 18-247 (902)
378 1p0i_A Cholinesterase; serine 98.9 1.5E-09 5E-14 122.9 9.9 127 576-706 93-227 (529)
379 2fj0_A JuvenIle hormone estera 98.9 2.2E-10 7.6E-15 130.1 3.1 126 576-705 91-232 (551)
380 3vu4_A KMHSV2; beta-propeller 98.9 1.5E-07 5E-12 101.3 25.2 188 155-415 60-273 (355)
381 4a11_B DNA excision repair pro 98.9 6.3E-08 2.2E-12 105.7 22.5 224 154-482 44-281 (408)
382 3v7d_B Cell division control p 98.9 4.5E-07 1.5E-11 101.3 29.8 291 119-508 134-452 (464)
383 3k26_A Polycomb protein EED; W 98.9 3.5E-08 1.2E-12 106.0 19.9 237 126-471 94-362 (366)
384 1jmk_C SRFTE, surfactin synthe 98.9 3.3E-09 1.1E-13 106.6 10.4 199 592-823 17-228 (230)
385 1ea5_A ACHE, acetylcholinester 98.9 1.6E-09 5.5E-14 122.6 8.9 127 576-706 95-229 (537)
386 3odt_A Protein DOA1; ubiquitin 98.9 1.7E-08 5.8E-13 105.9 16.3 262 124-480 36-299 (313)
387 3jro_A Fusion protein of prote 98.9 7.2E-08 2.5E-12 114.9 23.6 245 99-473 12-283 (753)
388 3icv_A Lipase B, CALB; circula 98.9 8.4E-09 2.9E-13 106.7 13.2 117 576-707 50-170 (316)
389 2cb9_A Fengycin synthetase; th 98.9 5.6E-09 1.9E-13 106.0 11.7 190 591-824 21-225 (244)
390 3gre_A Serine/threonine-protei 98.9 1.2E-07 4E-12 105.2 23.3 267 105-483 72-365 (437)
391 3f3f_A Nucleoporin SEH1; struc 98.9 7.1E-08 2.4E-12 102.4 20.7 194 104-414 19-250 (351)
392 4ggc_A P55CDC, cell division c 98.9 5.5E-07 1.9E-11 94.5 26.9 243 157-522 29-273 (318)
393 2hes_X YDR267CP; beta-propelle 98.9 3.5E-07 1.2E-11 97.2 25.4 201 154-474 15-229 (330)
394 1dx4_A ACHE, acetylcholinester 98.9 2.7E-09 9.4E-14 121.9 9.3 118 589-706 138-267 (585)
395 1ex9_A Lactonizing lipase; alp 98.9 5.7E-09 1.9E-13 108.5 10.6 102 590-706 5-109 (285)
396 2bce_A Cholesterol esterase; h 98.9 8.6E-10 2.9E-14 125.4 4.0 127 576-705 81-222 (579)
397 4gq1_A NUP37; propeller, trans 98.8 9.6E-08 3.3E-12 104.4 20.1 60 154-228 137-208 (393)
398 3tej_A Enterobactin synthase c 98.8 8E-09 2.7E-13 109.9 10.8 211 591-822 100-328 (329)
399 1ys1_X Lipase; CIS peptide Leu 98.8 1.1E-08 3.8E-13 107.6 11.4 105 590-706 6-114 (320)
400 3bix_A Neuroligin-1, neuroligi 98.8 2.2E-09 7.6E-14 122.4 6.0 124 576-704 112-247 (574)
401 1bu8_A Protein (pancreatic lip 98.8 2.7E-09 9.1E-14 117.9 6.4 113 589-706 67-181 (452)
402 2mad_H Methylamine dehydrogena 98.8 1.1E-06 3.7E-11 94.9 26.8 84 377-483 272-356 (373)
403 4gq1_A NUP37; propeller, trans 98.8 1.2E-07 4E-12 103.7 18.9 260 157-506 93-378 (393)
404 2x5x_A PHB depolymerase PHAZ7; 98.8 1.1E-08 3.7E-13 108.2 9.9 122 576-707 28-166 (342)
405 3gre_A Serine/threonine-protei 98.8 3.1E-07 1E-11 101.7 22.1 205 154-483 64-298 (437)
406 1w52_X Pancreatic lipase relat 98.8 4.3E-09 1.5E-13 116.2 6.7 112 590-706 68-181 (452)
407 3bg1_A Protein SEC13 homolog; 98.8 8.4E-08 2.9E-12 101.4 16.3 229 105-392 22-283 (316)
408 2hfk_A Pikromycin, type I poly 98.8 1.1E-08 3.9E-13 108.3 8.9 207 594-824 91-311 (319)
409 2j04_B YDR362CP, TAU91; beta p 98.8 8.2E-08 2.8E-12 108.7 16.5 162 273-504 235-414 (524)
410 3lrv_A PRE-mRNA-splicing facto 98.8 2E-06 6.9E-11 91.8 26.3 156 155-415 127-294 (343)
411 3e5z_A Putative gluconolactona 98.7 1E-06 3.4E-11 91.9 23.2 253 101-482 32-291 (296)
412 2oiz_A Aromatic amine dehydrog 98.7 7.5E-07 2.6E-11 96.0 22.6 99 376-500 258-360 (361)
413 3n2z_B Lysosomal Pro-X carboxy 98.7 7.2E-08 2.5E-12 105.4 13.4 109 591-704 38-159 (446)
414 3v7d_B Cell division control p 98.7 8.5E-07 2.9E-11 99.0 21.6 271 160-523 127-422 (464)
415 2zyr_A Lipase, putative; fatty 98.7 1.5E-08 5.3E-13 110.4 6.6 112 589-707 19-167 (484)
416 2dg1_A DRP35, lactonase; beta 98.7 3.1E-06 1E-10 89.8 24.4 254 101-477 49-316 (333)
417 3sjl_D Methylamine dehydrogena 98.7 5.6E-06 1.9E-10 88.5 26.0 90 375-488 283-374 (386)
418 3c75_H MADH, methylamine dehyd 98.6 3.5E-06 1.2E-10 91.7 24.2 85 376-483 323-408 (426)
419 1hpl_A Lipase; hydrolase(carbo 98.6 3.1E-08 1.1E-12 108.7 7.6 112 590-706 67-180 (449)
420 3dsm_A Uncharacterized protein 98.6 2.7E-06 9.1E-11 90.3 22.1 187 273-521 105-301 (328)
421 1rp1_A Pancreatic lipase relat 98.6 3.6E-08 1.2E-12 108.2 6.8 111 590-706 68-180 (450)
422 1qks_A Cytochrome CD1 nitrite 98.6 2.5E-06 8.5E-11 97.1 22.2 240 158-522 158-421 (567)
423 1mda_H Methylamine dehydrogena 98.6 3.5E-06 1.2E-10 90.1 21.8 261 158-523 69-347 (368)
424 3tjm_A Fatty acid synthase; th 98.6 7.6E-08 2.6E-12 100.0 8.7 96 590-705 22-123 (283)
425 3dr2_A Exported gluconolactona 98.6 2.2E-06 7.5E-11 89.9 20.0 251 101-475 49-304 (305)
426 1npe_A Nidogen, entactin; glyc 98.6 1.5E-05 5.2E-10 81.6 25.9 203 155-482 37-243 (267)
427 1npe_A Nidogen, entactin; glyc 98.6 7E-06 2.4E-10 84.1 22.6 178 273-521 58-237 (267)
428 3hrp_A Uncharacterized protein 98.6 1.1E-05 3.8E-10 88.3 25.1 218 154-485 131-362 (409)
429 3g4e_A Regucalcin; six bladed 98.5 2E-06 7E-11 89.7 18.0 238 102-465 18-263 (297)
430 2ghs_A AGR_C_1268P; regucalcin 98.5 5E-06 1.7E-10 88.1 20.9 233 101-466 53-294 (326)
431 2oit_A Nucleoporin 214KDA; NH2 98.5 3.2E-06 1.1E-10 93.4 20.0 168 155-414 94-279 (434)
432 2w18_A PALB2, fancn, partner a 98.5 8.7E-06 3E-10 84.9 21.2 166 156-411 181-355 (356)
433 3dsm_A Uncharacterized protein 98.5 1.4E-05 4.6E-10 84.8 23.5 219 155-483 85-308 (328)
434 2ovr_B FBW7, F-BOX/WD repeat p 98.4 1.6E-05 5.5E-10 88.1 23.1 298 123-521 135-441 (445)
435 2dst_A Hypothetical protein TT 98.4 3.9E-07 1.3E-11 82.3 8.1 82 592-694 22-103 (131)
436 2w18_A PALB2, fancn, partner a 98.4 1.1E-05 3.9E-10 84.0 19.2 226 153-472 111-354 (356)
437 2ece_A 462AA long hypothetical 98.4 5.2E-05 1.8E-09 81.6 24.5 204 271-506 162-399 (462)
438 2ece_A 462AA long hypothetical 98.4 3.1E-05 1.1E-09 83.3 22.1 87 373-481 322-430 (462)
439 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 3.8E-05 1.3E-09 80.3 22.9 196 274-521 93-298 (314)
440 2oit_A Nucleoporin 214KDA; NH2 98.3 2.1E-06 7.3E-11 94.9 12.5 93 272-412 117-222 (434)
441 1rwi_B Serine/threonine-protei 98.3 9.4E-05 3.2E-09 75.4 23.4 174 273-520 87-262 (270)
442 2hih_A Lipase 46 kDa form; A1 98.3 2.7E-06 9.3E-11 92.4 11.7 108 590-706 50-212 (431)
443 1ijq_A LDL receptor, low-densi 98.2 0.00018 6E-09 75.6 23.8 227 167-521 3-237 (316)
444 3fvz_A Peptidyl-glycine alpha- 98.2 0.0008 2.7E-08 71.0 28.9 115 374-521 198-321 (329)
445 2iwa_A Glutamine cyclotransfer 98.2 0.00015 5E-09 73.3 21.5 181 272-523 43-238 (266)
446 3v65_B Low-density lipoprotein 98.2 0.00016 5.5E-09 78.3 23.2 177 273-519 138-315 (386)
447 3v64_C Agrin; beta propeller, 98.2 0.00036 1.2E-08 74.3 25.7 177 273-519 95-272 (349)
448 2dsn_A Thermostable lipase; T1 98.2 6.1E-06 2.1E-10 88.3 11.6 103 591-706 5-164 (387)
449 2iwa_A Glutamine cyclotransfer 98.1 0.00022 7.5E-09 72.0 21.2 205 157-478 24-238 (266)
450 2p4o_A Hypothetical protein; p 98.1 0.00049 1.7E-08 71.8 24.9 228 156-508 34-278 (306)
451 2ovr_B FBW7, F-BOX/WD repeat p 98.1 0.00015 5.1E-09 80.2 21.9 264 160-523 124-392 (445)
452 3hrp_A Uncharacterized protein 98.1 0.00033 1.1E-08 76.4 23.9 159 159-415 176-356 (409)
453 1mda_H Methylamine dehydrogena 98.1 0.00015 5.1E-09 77.5 19.4 82 377-484 269-353 (368)
454 1fwx_A Nitrous oxide reductase 98.1 0.00016 5.4E-09 80.6 19.9 119 156-317 87-213 (595)
455 3p5b_L Low density lipoprotein 98.1 0.00048 1.6E-08 74.9 23.4 180 273-521 134-319 (400)
456 3sov_A LRP-6, low-density lipo 98.0 0.0011 3.7E-08 69.5 25.0 160 155-415 36-199 (318)
457 2qe8_A Uncharacterized protein 98.0 0.00049 1.7E-08 73.1 22.7 110 374-507 197-309 (343)
458 3v64_C Agrin; beta propeller, 98.0 0.00095 3.3E-08 71.0 24.7 161 154-415 73-236 (349)
459 3v65_B Low-density lipoprotein 98.0 0.00046 1.6E-08 74.6 22.4 160 154-415 116-279 (386)
460 1fwx_A Nitrous oxide reductase 98.0 5.1E-05 1.7E-09 84.6 14.7 103 273-413 254-361 (595)
461 1p22_A F-BOX/WD-repeat protein 98.0 6.3E-05 2.2E-09 83.0 15.7 184 160-416 138-328 (435)
462 1q7f_A NHL, brain tumor CG1071 97.9 0.0051 1.7E-07 62.9 27.7 175 273-520 100-278 (286)
463 3no2_A Uncharacterized protein 97.9 0.0019 6.6E-08 66.1 22.9 139 273-482 56-200 (276)
464 3sov_A LRP-6, low-density lipo 97.9 0.0012 4.3E-08 69.0 21.7 179 273-522 57-238 (318)
465 1ijq_A LDL receptor, low-densi 97.9 0.0024 8.2E-08 66.8 23.9 161 154-415 30-197 (316)
466 1rwi_B Serine/threonine-protei 97.8 0.0012 4.1E-08 67.0 20.9 173 273-520 46-220 (270)
467 3p5b_L Low density lipoprotein 97.8 0.0015 5.3E-08 70.8 22.6 161 154-416 112-280 (400)
468 3nol_A Glutamine cyclotransfer 97.8 0.0008 2.7E-08 67.1 17.6 178 272-521 64-255 (262)
469 2fp8_A Strictosidine synthase; 97.8 0.002 6.9E-08 67.5 22.1 194 274-521 102-312 (322)
470 2z2n_A Virginiamycin B lyase; 97.8 0.019 6.5E-07 58.6 29.0 140 273-484 120-261 (299)
471 1p22_A F-BOX/WD-repeat protein 97.8 0.00064 2.2E-08 74.8 18.4 211 125-415 151-367 (435)
472 1n7d_A LDL receptor, low-densi 97.7 0.00014 4.7E-09 85.1 13.2 179 273-521 428-613 (699)
473 3m0c_C LDL receptor, low-densi 97.7 0.0045 1.5E-07 72.9 25.9 180 273-521 446-631 (791)
474 4a0p_A LRP6, LRP-6, low-densit 97.7 0.0043 1.5E-07 71.3 24.4 162 154-416 37-200 (628)
475 3qqz_A Putative uncharacterize 97.7 0.0044 1.5E-07 62.0 21.3 210 154-477 27-253 (255)
476 1n7d_A LDL receptor, low-densi 97.7 0.00033 1.1E-08 81.9 15.1 98 272-415 474-573 (699)
477 1whs_A Serine carboxypeptidase 97.7 0.00025 8.4E-09 70.5 11.8 135 572-710 30-190 (255)
478 4ebb_A Dipeptidyl peptidase 2; 97.7 0.00021 7.1E-09 79.1 12.1 111 590-706 41-163 (472)
479 3fvz_A Peptidyl-glycine alpha- 97.6 0.0094 3.2E-07 62.6 24.0 152 272-483 68-233 (329)
480 2z2n_A Virginiamycin B lyase; 97.6 0.015 5E-07 59.6 25.0 234 154-520 15-253 (299)
481 3m0c_C LDL receptor, low-densi 97.6 0.0042 1.4E-07 73.1 22.6 161 154-416 424-592 (791)
482 1ivy_A Human protective protei 97.6 0.00027 9.2E-09 77.3 11.5 126 573-708 31-183 (452)
483 3s94_A LRP-6, low-density lipo 97.6 0.0055 1.9E-07 70.4 22.5 204 154-481 40-247 (619)
484 4a0p_A LRP6, LRP-6, low-densit 97.5 0.019 6.6E-07 65.9 26.1 178 273-523 59-238 (628)
485 3nol_A Glutamine cyclotransfer 97.5 0.0034 1.2E-07 62.6 16.9 200 157-475 46-254 (262)
486 1q7f_A NHL, brain tumor CG1071 97.4 0.0056 1.9E-07 62.6 18.8 94 273-412 142-237 (286)
487 1pjx_A Dfpase, DIISOPROPYLFLUO 97.4 0.0095 3.2E-07 61.7 20.7 161 155-415 118-301 (314)
488 3mbr_X Glutamine cyclotransfer 97.4 0.011 3.6E-07 58.4 19.4 178 272-521 42-234 (243)
489 3no2_A Uncharacterized protein 97.4 0.004 1.4E-07 63.7 17.2 185 269-523 11-196 (276)
490 2qc5_A Streptogramin B lactona 97.4 0.047 1.6E-06 55.7 24.9 172 273-520 83-258 (300)
491 2qe8_A Uncharacterized protein 97.3 0.0079 2.7E-07 63.7 17.9 68 154-225 67-137 (343)
492 3s94_A LRP-6, low-density lipo 97.2 0.076 2.6E-06 60.8 26.9 161 155-416 350-513 (619)
493 3nok_A Glutaminyl cyclase; bet 97.2 0.012 4E-07 58.7 17.3 167 273-509 75-256 (268)
494 3qqz_A Putative uncharacterize 97.2 0.044 1.5E-06 54.7 21.6 202 211-519 30-250 (255)
495 2px6_A Thioesterase domain; th 97.1 0.0012 4.2E-08 69.1 9.8 96 590-705 44-145 (316)
496 3sre_A PON1, serum paraoxonase 97.0 0.16 5.4E-06 53.4 24.4 109 272-415 140-254 (355)
497 2qc5_A Streptogramin B lactona 97.0 0.1 3.4E-06 53.1 22.7 231 155-519 63-297 (300)
498 4az3_A Lysosomal protective pr 96.9 0.0093 3.2E-07 60.6 13.6 129 572-709 32-186 (300)
499 2p4o_A Hypothetical protein; p 96.9 0.25 8.6E-06 50.9 24.9 40 155-196 73-113 (306)
500 3tc9_A Hypothetical hydrolase; 96.8 0.017 6E-07 63.1 16.1 159 154-413 137-301 (430)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=5.7e-57 Score=540.59 Aligned_cols=610 Identities=14% Similarity=0.182 Sum_probs=432.9
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003363 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (826)
Q Consensus 102 ~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (826)
..+||||++|+|.......-.......+|++++. +++.++|+..+ ..+..|+|||||++|||+++. .+
T Consensus 67 ~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~--~~~~~~l~~~~-----~~~~~~~~SPdG~~la~~~~~-----~i 134 (740)
T 4a5s_A 67 YSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN--KRQLITEERIP-----NNTQWVTWSPVGHKLAYVWNN-----DI 134 (740)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT--TTEECCSSCCC-----TTEEEEEECSSTTCEEEEETT-----EE
T ss_pred eEECCCCCEEEEEECCeeeEEEccceEEEEEECC--CCcEEEcccCC-----CcceeeEECCCCCEEEEEECC-----eE
Confidence 4569999999998765443333445788888864 34556666544 468999999999999999764 36
Q ss_pred EEEe-cCCceeEEEecCC------CccccccCCCc---ccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCC
Q 003363 182 FELW-SQSQLEKEFHVPQ------TVHGSVYADGW---FEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCN 251 (826)
Q Consensus 182 ~~i~-~~~~~~~~~~~~~------~~~g~v~~~~~---~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (826)
+... .+++.++++.... +...+||.++. ...++|||||++|||.+.+..... .|......... ...
T Consensus 135 ~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~-~~~~~~~~~~~---~~~ 210 (740)
T 4a5s_A 135 YVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVP-LIEYSFYSDES---LQY 210 (740)
T ss_dssp EEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCC-EEEEEECCSTT---CSS
T ss_pred EEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCc-eEEEEeecCCC---CCC
Confidence 6665 5666666654211 12233333221 246899999999999987664321 22110000000 000
Q ss_pred CCCCcceeecCCCccCCCccCceEEEEEccC---C---ceEeccCCC-----CCCccceEEEeeCCCCCccEEEEEeecC
Q 003363 252 SWKGQGDWEEDWGETYAGKRQPSLFVININS---G---EVQAVKGIP-----KSLSVGQVVWAPLNEGLHQYLVFVGWSS 320 (826)
Q Consensus 252 ~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~---g---~~~~l~~~~-----~~~~~~~~~wSPDg~~~~~~lvf~~~~~ 320 (826)
.......|... |+. .....|+++|+++ + +.+.+. .+ ....+..++|||||+. +++..++.
T Consensus 211 ~~~~~~~yp~~-G~~---~~~~~l~v~d~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~wspdg~~----~~~~~~r~ 281 (740)
T 4a5s_A 211 PKTVRVPYPKA-GAV---NPTVKFFVVNTDSLSSVTNATSIQIT-APASMLIGDHYLCDVTWATQERI----SLQWLRRI 281 (740)
T ss_dssp CEEEEEECCBT-TSC---CCEEEEEEEETTSCCSSSCCCEEEEC-CCHHHHTSCEEEEEEEEEETTEE----EEEEEESS
T ss_pred CcceeecCCCC-cCc---CCeeEEEEEECCCCCCCCcceEEEec-CCccCCCCCeEEEEEEEeCCCeE----EEEEeCCC
Confidence 11112223322 211 1234799999999 8 666663 21 3445778999999998 88877543
Q ss_pred cceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-------ceec--CCCCcc-----ccCceecCCCCEE
Q 003363 321 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-------VVNL--TESISS-----AFFPRFSPDGKFL 386 (826)
Q Consensus 321 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-------~~~L--t~~~~~-----~~~p~~SpDG~~l 386 (826)
.. ...|+++|+ ++++ .+++ ..+... ...|.|||||+.|
T Consensus 282 ~~-----------~~~i~~~d~-----------------~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 282 QN-----------YSVMDICDY-----------------DESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp TT-----------EEEEEEEEE-----------------ETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred CC-----------EEEEEEEEC-----------------CCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 32 236999998 5554 3333 112222 3489999999999
Q ss_pred E-EEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEe-
Q 003363 387 V-FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW- 464 (826)
Q Consensus 387 ~-f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~- 464 (826)
+ |.+.++ +..+||++|++++..++++.+..++.. .+++||+.|+|.+..
T Consensus 334 ~~~~s~~~--------G~~~l~~~~~~~~~~~~lT~g~~~v~~---------------------~~~~d~~~i~f~~~~~ 384 (740)
T 4a5s_A 334 YKIISNEE--------GYRHICYFQIDKKDCTFITKGTWEVIG---------------------IEALTSDYLYYISNEY 384 (740)
T ss_dssp EEEEECTT--------SCEEEEEEETTCSSCEESCCSSSCEEE---------------------EEEECSSEEEEEESCG
T ss_pred EEEEEcCC--------CceEEEEEECCCCceEecccCCEEEEE---------------------EEEEeCCEEEEEEecC
Confidence 8 666553 457899999999888888766544333 123568899999876
Q ss_pred ---CCeEEEEEEECCCCcEE-EecCC----CCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCC
Q 003363 465 ---GSSQVIISVNVSSGELL-RITPA----ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSS 536 (826)
Q Consensus 465 ---~~~~~l~~vdl~tg~~~-~lt~~----~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~ 536 (826)
.+..+||++++++++.+ +|+.. ...+....||++++.+++.++++. |+.+++.+...++ ...
T Consensus 385 ~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~-~~~-------- 454 (740)
T 4a5s_A 385 KGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDK-GLR-------- 454 (740)
T ss_dssp GGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTE-EEE--------
T ss_pred CCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCC-CCEEEEEECCCCc-EEE--------
Confidence 46789999999887765 77754 234566789999999999999987 8899998865432 111
Q ss_pred CCCCCchhhhhcccccceeeeeecccCceeeeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-ccch-HHH
Q 003363 537 PISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYS-KSL 614 (826)
Q Consensus 537 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~~~-~~~ 614 (826)
+...|+.+...+....+...+. ..+ ..+|.+++++++.|+++++.+++|+||++|||++.... ..|. ...
T Consensus 455 -~l~~n~~~~~~~~~~~~~~~~~------~~~-~~dg~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~ 526 (740)
T 4a5s_A 455 -VLEDNSALDKMLQNVQMPSKKL------DFI-ILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWA 526 (740)
T ss_dssp -EEECCHHHHHHHTTEECCEEEE------EEE-EETTEEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHH
T ss_pred -EeccChhhhhhhhhccCCccEE------EEE-ccCCeEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHH
Confidence 1223444434343332221111 122 45789999999999988778899999999999877432 2222 233
Q ss_pred HHHH-HCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCC
Q 003363 615 AFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP 693 (826)
Q Consensus 615 ~~la-~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p 693 (826)
..|+ ++||+|+++|+||++++|..+.......++..+++|+.++++++.+++.+|++||+|+|||+||++++.++.++|
T Consensus 527 ~~l~~~~G~~Vv~~D~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p 606 (740)
T 4a5s_A 527 TYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGS 606 (740)
T ss_dssp HHHHHTTCCEEEEECCTTCSSSCHHHHGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTC
T ss_pred HHHHhcCCeEEEEEcCCCCCcCChhHHHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCC
Confidence 4555 599999999999999999998888888888888999999999999888899999999999999999999999999
Q ss_pred CceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCC-ChhhHHHHhhcCcccccCCCCC-cEEEEEeCCCC
Q 003363 694 DKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESP-SVEDLTRFHSKSPISHISKVKT-PTIFLLGAQDL 771 (826)
Q Consensus 694 ~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sp~~~~~~i~~-PvLii~G~~D~ 771 (826)
++|+++|+.+|+.++..+.. .+.+. +.+.+ ..+..+.+...+|...+.++++ |+||+||+.|.
T Consensus 607 ~~~~~~v~~~p~~~~~~~~~-------~~~~~--------~~~~p~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~ 671 (740)
T 4a5s_A 607 GVFKCGIAVAPVSRWEYYDS-------VYTER--------YMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADD 671 (740)
T ss_dssp SCCSEEEEESCCCCGGGSBH-------HHHHH--------HHCCSSTTTTHHHHHHSCSGGGGGGGGGSEEEEEEETTCS
T ss_pred CceeEEEEcCCccchHHhhh-------HHHHH--------HcCCCCccccHHHHHhCCHHHHHhcCCCCcEEEEEcCCCC
Confidence 99999999999988654311 11111 11222 1345667888899999999987 99999999999
Q ss_pred CCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 772 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 772 ~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
+||+.++.+++++|+++|+++++++||+++|.+...+...+++..+.+||+++|+
T Consensus 672 ~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 726 (740)
T 4a5s_A 672 NVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFS 726 (740)
T ss_dssp SSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHHHCCCCeEEEEECCCCCcCCCCccHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999997666677889999999999874
No 2
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=2.4e-53 Score=495.71 Aligned_cols=561 Identities=16% Similarity=0.216 Sum_probs=412.1
Q ss_pred HHHHHHHHHHHHhhcCccccceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceeccc
Q 003363 77 EEYASLSKLLQDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGA 156 (826)
Q Consensus 77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~ 156 (826)
-+|.+..+.++++...+ .....+ ||||++|+|..... ....||. + .+++.+++|.... ..+
T Consensus 7 ~~~~~~~~~~~~~~~~~--~~~~~~---~~DG~~la~~s~~~------g~~~lw~--~--~~g~~~~lt~~~~----~~~ 67 (582)
T 3o4h_A 7 VEFSRIVRDVERLIAVE--KYSLQG---VVDGDKLLVVGFSE------GSVNAYL--Y--DGGETVKLNREPI----NSV 67 (582)
T ss_dssp CCHHHHHHHHHHHHHSC--EEEEEE---EETTTEEEEEEEET------TEEEEEE--E--ETTEEEECCSSCC----SEE
T ss_pred ccHHHHHHHHHHHhccc--hheeec---CCCCCeEEEEEccC------CceeEEE--E--cCCCcEeeecccc----ccc
Confidence 34666666777776665 223333 79999999986532 2456776 3 3456677765541 257
Q ss_pred EEEEeCCCCCeEEEEecCC--CCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 157 SAVVPSPSGSKLLVVRNPE--NESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 157 ~~~~~SPdG~~la~~~~~~--~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
..++|||| +++|.+..+ ++...+|.+.. .+...+++.. .+. ...+|||||+.++|++...
T Consensus 68 ~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~-~~~----------~~~~~s~dg~~~~~~s~~~--- 131 (582)
T 3o4h_A 68 LDPHYGVG--RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAV-KPM----------RILSGVDTGEAVVFTGATE--- 131 (582)
T ss_dssp CEECTTCS--EEEEEEECSTTSCCEEEEEEETTSTTCCEECTTS-CSB----------EEEEEEECSSCEEEEEECS---
T ss_pred ccccCCCC--eEEEEeccCCCCcceEEEEEeccCCCccccccCC-CCc----------eeeeeCCCCCeEEEEecCC---
Confidence 88999999 677877652 23335666654 5554433221 122 4668999999999986543
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccE
Q 003363 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 312 (826)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~ 312 (826)
..+.+||+++|+.+.+. .... .+++|||||+.
T Consensus 132 ----------------------------------------~~~~l~d~~~g~~~~l~--~~~~--~~~~~spDG~~---- 163 (582)
T 3o4h_A 132 ----------------------------------------DRVALYALDGGGLRELA--RLPG--FGFVSDIRGDL---- 163 (582)
T ss_dssp ----------------------------------------SCEEEEEEETTEEEEEE--EESS--CEEEEEEETTE----
T ss_pred ----------------------------------------CCceEEEccCCcEEEee--cCCC--ceEEECCCCCE----
Confidence 23447899999988884 2222 78999999999
Q ss_pred EEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEecc
Q 003363 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 392 (826)
Q Consensus 313 lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~ 392 (826)
|+|.+..... ...||++|+ ++++.++|+.+.+....|+|||||++|+ .+..
T Consensus 164 la~~~~~~~~-----------~~~i~~~d~-----------------~~g~~~~l~~~~~~~~~~~~SpDG~~l~-~~~~ 214 (582)
T 3o4h_A 164 IAGLGFFGGG-----------RVSLFTSNL-----------------SSGGLRVFDSGEGSFSSASISPGMKVTA-GLET 214 (582)
T ss_dssp EEEEEEEETT-----------EEEEEEEET-----------------TTCCCEEECCSSCEEEEEEECTTSCEEE-EEEC
T ss_pred EEEEEEcCCC-----------CeEEEEEcC-----------------CCCCceEeecCCCccccceECCCCCEEE-EccC
Confidence 9988743221 136999998 7888899998888889999999999998 4433
Q ss_pred CCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCc--------cccCCCEEEEEEEe
Q 003363 393 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP--------WLSDGCTMLLSSIW 464 (826)
Q Consensus 393 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~--------ws~Dg~~l~~~~~~ 464 (826)
+ +..+|+++|+.+++.+ +...... .+..+. |+||| .+++++..
T Consensus 215 ~--------~~~~i~~~d~~~~~~~-~~~~~~~-------------------~~~~~~~~~~~~~~~spdg-~~~~~~~~ 265 (582)
T 3o4h_A 215 A--------REARLVTVDPRDGSVE-DLELPSK-------------------DFSSYRPTAITWLGYLPDG-RLAVVARR 265 (582)
T ss_dssp S--------SCEEEEEECTTTCCEE-ECCCSCS-------------------HHHHHCCSEEEEEEECTTS-CEEEEEEE
T ss_pred C--------CeeEEEEEcCCCCcEE-EccCCCc-------------------ChhhhhhccccceeEcCCC-cEEEEEEc
Confidence 2 2368999999887654 2221110 112334 99999 68888888
Q ss_pred CCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchh
Q 003363 465 GSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEK 544 (826)
Q Consensus 465 ~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (826)
++...||.+ |+..+. . .+.+....++ + +.+++..++..+|+++++.++.+ + ... | .+++.
T Consensus 266 ~g~~~l~~~----g~~~~~-~-~~~v~~~~~s-d-g~~l~~~s~~~~p~~l~~~d~~~-~-~~~---------l-~~~~~ 325 (582)
T 3o4h_A 266 EGRSAVFID----GERVEA-P-QGNHGRVVLW-R-GKLVTSHTSLSTPPRIVSLPSGE-P-LLE---------G-GLPED 325 (582)
T ss_dssp TTEEEEEET----TEEECC-C-SSEEEEEEEE-T-TEEEEEEEETTEEEEEEEETTCC-E-EEC---------C-CCCHH
T ss_pred CCcEEEEEE----CCeecc-C-CCceEEEEec-C-CEEEEEEcCCCCCCeEEEEcCCC-c-eEE---------E-ecCCc
Confidence 888888876 555542 2 2334445667 4 46678888899999999988643 2 111 1 11110
Q ss_pred hhhcccccce-eeeeecccCceeeeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcE
Q 003363 545 VKSLLSSRQF-SIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYS 623 (826)
Q Consensus 545 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~ 623 (826)
.. ..+ .... ..+...+|.+++++++.|++.. .++|+||++||+++......|...++.|+++||.
T Consensus 326 ~~-----~~~~~~~~-------~~~~~~~g~~i~~~~~~p~~~~--~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~ 391 (582)
T 3o4h_A 326 LR-----RSIAGSRL-------VWVESFDGSRVPTYVLESGRAP--TPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFH 391 (582)
T ss_dssp HH-----HTEEEEEE-------EEEECTTSCEEEEEEEEETTSC--SSEEEEEEECSSSSCCCCSSCCHHHHHHHHTTCE
T ss_pred cc-----cccCcceE-------EEEECCCCCEEEEEEEcCCCCC--CCCcEEEEECCCcccccccccCHHHHHHHhCCCE
Confidence 00 111 1111 2445557889999999998643 3889999999998876666788899999999999
Q ss_pred EEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecC
Q 003363 624 LLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARN 703 (826)
Q Consensus 624 Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~ 703 (826)
|+++|+||++++|.++.......++...++|+.++++++++++.+| +|+|+|||+||++++.++.++|++++++|+.+
T Consensus 392 v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~ 469 (582)
T 3o4h_A 392 VVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWARESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGA 469 (582)
T ss_dssp EEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEES
T ss_pred EEEeccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHHHhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcC
Confidence 9999999999999999887788888888999999999999997776 99999999999999999999999999999999
Q ss_pred CccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHH
Q 003363 704 PLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYAR 783 (826)
Q Consensus 704 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~ 783 (826)
|+.++..+....+.....+.+. +.+ +..+.+...+|+..+.++++|+|++||++|.++|+.+++++++
T Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~--------~~~----~~~~~~~~~sp~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~ 537 (582)
T 3o4h_A 470 SVVDWEEMYELSDAAFRNFIEQ--------LTG----GSREIMRSRSPINHVDRIKEPLALIHPQNASRTPLKPLLRLMG 537 (582)
T ss_dssp CCCCHHHHHHTCCHHHHHHHHH--------HTT----TCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHH
T ss_pred CccCHHHHhhcccchhHHHHHH--------HcC----cCHHHHHhcCHHHHHhcCCCCEEEEecCCCCCcCHHHHHHHHH
Confidence 9998876654332211001111 111 3456677889999999999999999999999999999999999
Q ss_pred HHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 784 ALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 784 ~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
+|+.+|++++++++|+++|.+..++...+++..+.+||+++|+
T Consensus 538 ~l~~~g~~~~~~~~~~~gH~~~~~~~~~~~~~~i~~fl~~~l~ 580 (582)
T 3o4h_A 538 ELLARGKTFEAHIIPDAGHAINTMEDAVKILLPAVFFLATQRE 580 (582)
T ss_dssp HHHHTTCCEEEEEETTCCSSCCBHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCCCEEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999988666677899999999999985
No 3
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=1.4e-52 Score=497.10 Aligned_cols=593 Identities=18% Similarity=0.234 Sum_probs=422.8
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCccee----cccEEEEe--CCCCCe-EEEEec
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEM----TGASAVVP--SPSGSK-LLVVRN 173 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~----~~~~~~~~--SPdG~~-la~~~~ 173 (826)
.+..|+ +.++|...+.+ ...+..||.. ..++..++|+..+..... .+...+.| ||||++ |+|...
T Consensus 28 ~~~~s~--~~~~~~~~~~~---~~~~~~l~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~ 99 (662)
T 3azo_A 28 CVGAVG--DEVWWVAPRPA---EAGRATLVRR---RADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF 99 (662)
T ss_dssp EEEEET--TEEEEEEEETT---TTTEEEEEEE---CTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT
T ss_pred eeEEcC--CeEEEEecCcc---cCCcEEEEEE---CCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC
Confidence 334454 46778766433 1235677775 234556777766522100 00114555 499999 999865
Q ss_pred CCCCCCeEEEEecC----CceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcc
Q 003363 174 PENESPIQFELWSQ----SQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKD 249 (826)
Q Consensus 174 ~~~~~~~~~~i~~~----~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (826)
. ..++|.+..+ +..++++......++ .....++|||||++|+|.+++....
T Consensus 100 ~---~~~l~~~~~~~~g~~~~~~l~~~~~~~~~-----~~~~~~~~spDg~~l~~~~~~~~~~----------------- 154 (662)
T 3azo_A 100 G---DQRLYAFEPDAPGGAVPRPLTPVSAVGGG-----LRWADPVLLPERGEVWCMAEEFTGE----------------- 154 (662)
T ss_dssp T---TCCEEEECTTSTTCCCCEECSCCCCSTTC-----EEEEEEEEETTTTEEEEEEEEECSS-----------------
T ss_pred C---CCeEEEEcCCCCCCCCCEeccCCccCCCC-----ccccCcEECCCCCEEEEEEecccCC-----------------
Confidence 4 3468877744 666666553211111 1236899999999999998753110
Q ss_pred CCCCCCcceeecCCCccCCCccCceEEEEEccC------CceEeccCC-CCCCccceEEEeeCCCCCccEEEEEeecCcc
Q 003363 250 CNSWKGQGDWEEDWGETYAGKRQPSLFVININS------GEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSET 322 (826)
Q Consensus 250 ~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~------g~~~~l~~~-~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~ 322 (826)
+. .....+|+++|+++ ++.+.+ + .+...+..++|||||+. |+|.++....
T Consensus 155 --------------~~---~~~~~~i~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~SpDG~~----la~~~~~~~~ 211 (662)
T 3azo_A 155 --------------GP---SDVRRFLAAVPLDGSAAADRSAVREL--SDDAHRFVTGPRLSPDGRQ----AVWLAWDHPR 211 (662)
T ss_dssp --------------ST---TCEEEEEEEEETTSTTTTCGGGSEES--SCSCSSEECCCEECTTSSE----EEEEEECTTC
T ss_pred --------------CC---CCceeEEEEEECCCCccccCCceeEE--EecCCCcccCceECCCCCE----EEEEECCCCC
Confidence 00 11447899999999 888888 5 44556678999999999 9999864421
Q ss_pred eeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCC-CC---cceecCCC-CccccCceecCCCCEEEEEeccCCCCC
Q 003363 323 RKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE-DL---PVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDS 397 (826)
Q Consensus 323 ~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-~~---~~~~Lt~~-~~~~~~p~~SpDG~~l~f~s~~~~~~~ 397 (826)
.. + ....||++|+ + ++ +.++|+.. ......|.|||||+ |+|.+..+
T Consensus 212 ~~----~---~~~~i~~~d~-----------------~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~---- 262 (662)
T 3azo_A 212 MP----W---EGTELKTARV-----------------TEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRT---- 262 (662)
T ss_dssp CT----T---TCEEEEEEEE-----------------CTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTT----
T ss_pred CC----C---CCcEEEEEEE-----------------CCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCC----
Confidence 10 0 1247999998 5 45 66777764 56788999999999 88888664
Q ss_pred CCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCC
Q 003363 398 GAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS 477 (826)
Q Consensus 398 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~t 477 (826)
+..+||++|+.+++.+.++...... ..+ .|......+.|++|++ +++.... +...||.+|+++
T Consensus 263 ----~~~~l~~~~~~~~~~~~l~~~~~~~----------~~p-~w~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~d~~~ 325 (662)
T 3azo_A 263 ----GWWNLHRVDPATGAATQLCRREEEF----------AGP-LWTPGMRWFAPLANGL-IAVVHGK-GAAVLGILDPES 325 (662)
T ss_dssp ----SSCEEEEECTTTCCEEESSCCSSBS----------SCC-CCSTTCCSEEECTTSC-EEEEEBS-SSCEEEEEETTT
T ss_pred ----CCeEEEEEECCCCceeecccccccc----------cCc-cccccCceEeEeCCCE-EEEEEEc-CccEEEEEECCC
Confidence 3468999998776654443322110 000 1222234567788887 6666666 888999999999
Q ss_pred CcEEEecCCCCCeeeEEE-eecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhhcccccceee
Q 003363 478 GELLRITPAESNFSWSLL-TLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSI 556 (826)
Q Consensus 478 g~~~~lt~~~~~~~~~~~-s~dg~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 556 (826)
++.++|+.....+ ..+ +++++.++++.++.+.|.+||++++.+++ ...+ +..+. ..+....+..
T Consensus 326 ~~~~~l~~~~~~~--~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~-~~~l---------~~~~~---~~~~~~~~~~ 390 (662)
T 3azo_A 326 GELVDAAGPWTEW--AATLTVSGTRAVGVAASPRTAYEVVELDTVTGR-ARTI---------GARHT---DPVDPAYYPE 390 (662)
T ss_dssp TEEEECCSSCCEE--EEEEEEETTEEEEEEEETTEEEEEEEEETTTCC-EEEE---------ESCCC---CSSCGGGSCC
T ss_pred CcEEEecCCCCeE--EEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc-eEEe---------ecCCc---ccCCccccCc
Confidence 9999987765533 344 88999999999999999999999876543 1111 11110 0011111110
Q ss_pred eeecccCceeeeccCCCeeEEEEEEecCCCC----CCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCC
Q 003363 557 MKIPVKGVSANLTKGAQKPFEAIFVSSSHKK----DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGS 632 (826)
Q Consensus 557 ~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~----~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~ 632 (826)
. ....+...+|..++++++.|++++ .++++|+||++||+++......|...++.|+++||.|+++|+||+
T Consensus 391 ----~--~~~~~~~~dg~~i~~~~~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~ 464 (662)
T 3azo_A 391 ----P--QIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVLDLDVAYFTSRGIGVADVNYGGS 464 (662)
T ss_dssp ----C--EEEEEECTTSCEEEEEEECCCCSSEECCTTCCCCEEEEECSSSSSCCCCSCCHHHHHHHTTTCEEEEEECTTC
T ss_pred ----c--eEEEEEcCCCCEEEEEEECCCCccccCCCCCCccEEEEECCCCCccCcccchHHHHHHHhCCCEEEEECCCCC
Confidence 0 112344557889999999998754 457899999999998776555788889999999999999999999
Q ss_pred CCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc
Q 003363 633 LGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 712 (826)
Q Consensus 633 ~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~ 712 (826)
+++|.++.......++..+++|+.++++++++++.+|++||+|+|||+||+++++++.+ |++|+++|+.+|+.++..+.
T Consensus 465 ~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~ 543 (662)
T 3azo_A 465 TGYGRAYRERLRGRWGVVDVEDCAAVATALAEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWA 543 (662)
T ss_dssp SSSCHHHHHTTTTTTTTHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHH
T ss_pred CCccHHHHHhhccccccccHHHHHHHHHHHHHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHh
Confidence 99999998777777777889999999999999988999999999999999999998886 99999999999999887654
Q ss_pred c-CCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCC
Q 003363 713 G-TTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 791 (826)
Q Consensus 713 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~ 791 (826)
. ........+... +.+.. .+..+.+...+|+..+.++++|+|++||++|.+||+.++++++++|++.|++
T Consensus 544 ~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~ 614 (662)
T 3azo_A 544 DGGTHDFESRYLDF--------LIGSF-EEFPERYRDRAPLTRADRVRVPFLLLQGLEDPVCPPEQCDRFLEAVAGCGVP 614 (662)
T ss_dssp TTCSCGGGTTHHHH--------HTCCT-TTCHHHHHHTCGGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHTTSCCC
T ss_pred cccccchhhHhHHH--------HhCCC-ccchhHHHhhChHhHhccCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 3 111100011111 11111 2455677788999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 792 TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 792 ~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
++++++|+++|.+...+...+.+..+.+||.++|+
T Consensus 615 ~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 649 (662)
T 3azo_A 615 HAYLSFEGEGHGFRRKETMVRALEAELSLYAQVFG 649 (662)
T ss_dssp EEEEEETTCCSSCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEECCCCCCCCChHHHHHHHHHHHHHHHHHhC
Confidence 99999999999987666667889999999999874
No 4
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=4.2e-53 Score=506.98 Aligned_cols=619 Identities=16% Similarity=0.169 Sum_probs=417.3
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (826)
.+.+||||++|+|...............++++++.+. +.++++...- ....+..++|||||++|||+++. +
T Consensus 65 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~--~~~~l~~~~~--~~~~~~~~~~SPdG~~la~~~~~-----~ 135 (723)
T 1xfd_A 65 RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG--DPQSLDPPEV--SNAKLQYAGWGPKGQQLIFIFEN-----N 135 (723)
T ss_dssp EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC--CCEECCCTTC--CSCCCSBCCBCSSTTCEEEEETT-----E
T ss_pred eEEECCCCCEEEEEecCccceeecceeeEEEEECCCC--ceEeccCCcc--ccccccccEECCCCCEEEEEECC-----e
Confidence 3456999999999876544333334578888887433 3344543321 00236789999999999999873 4
Q ss_pred EEEEe-cCCceeEEEecCC------CccccccCCCc---ccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccC
Q 003363 181 QFELW-SQSQLEKEFHVPQ------TVHGSVYADGW---FEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDC 250 (826)
Q Consensus 181 ~~~i~-~~~~~~~~~~~~~------~~~g~v~~~~~---~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (826)
++.++ .+++..+++.... +..+++|.++. ...++|||||++|||.+.+.... ..+...... .. .
T Consensus 136 i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~-~~~~~~~~~-~~----~ 209 (723)
T 1xfd_A 136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRV-PIMELPTYT-GS----I 209 (723)
T ss_dssp EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTS-CEEEECCCS-SS----S
T ss_pred EEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCcc-ceEEeeccC-Cc----C
Confidence 66666 5666777765321 11122333322 25799999999999998765321 112211000 00 0
Q ss_pred CCCCCcceeecCCCccCCCccCceEEEEEccCCce-EeccCCC----CCCccceEEEeeCCCCCccEEEEEeecCcceee
Q 003363 251 NSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVKGIP----KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKL 325 (826)
Q Consensus 251 ~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~-~~l~~~~----~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~ 325 (826)
........|.++ |.. .....|++||+++++. +.++... ....+..++|||||+. |++...+..
T Consensus 210 ~~~~~~~~~~~~-G~~---~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~----l~~~~~~~~---- 277 (723)
T 1xfd_A 210 YPTVKPYHYPKA-GSE---NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKV----AVTWLNRAQ---- 277 (723)
T ss_dssp SCCCEEEECCBT-TSC---CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEE----EEEEEETTS----
T ss_pred CCcceeccCCCC-CCC---CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeE----EEEEEcCCC----
Confidence 011123334443 321 1345899999999884 6663110 1345678999999997 877664322
Q ss_pred eeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCC--Cccc----cCceecCCCCEEEEEeccCCCCCCC
Q 003363 326 GIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES--ISSA----FFPRFSPDGKFLVFLSAKSSVDSGA 399 (826)
Q Consensus 326 g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~--~~~~----~~p~~SpDG~~l~f~s~~~~~~~g~ 399 (826)
....|+++|+ .+++...+... .+.. ..|.|||||++|+|.+.... |.
T Consensus 278 -------~~~~i~~~d~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---~~ 330 (723)
T 1xfd_A 278 -------NVSILTLCDA-----------------TTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQ---GG 330 (723)
T ss_dssp -------CEEEEEEEET-----------------TTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECC---SS
T ss_pred -------CeEEEEEEeC-----------------CCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEeccc---CC
Confidence 2237999998 67776655322 2222 48999999999999843321 22
Q ss_pred CcccceEEEEe-CCCCC---CCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeC--CeEEEEEE
Q 003363 400 HSATDSLHRID-WPTNG---NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG--SSQVIISV 473 (826)
Q Consensus 400 ~~~~~~l~~~d-~~~~~---~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~--~~~~l~~v 473 (826)
+....+||++| ..++. .+.++.+..++. ..+.|+|||+.|++.+..+ +...||.+
T Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~-------------------~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 391 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNSSNDNIQSITSGDWDVT-------------------KILAYDEKGNKIYFLSTEDLPRRRQLYSA 391 (723)
T ss_dssp SSCEEEEEEECSSCCSSSCCCCBSCCSSSCEE-------------------EEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred CcceeEEEEEeccCCCCccceeEeecCCeEEE-------------------eeeEEcCCCCEEEEEEcCCCCcceEEEEE
Confidence 22356899999 45555 444443221111 1257999999999887765 67899999
Q ss_pred ECCCC-cEEEecCC---CCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhhcc
Q 003363 474 NVSSG-ELLRITPA---ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLL 549 (826)
Q Consensus 474 dl~tg-~~~~lt~~---~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 549 (826)
++.++ +.++|+.. ...+....|++||+.+++..++++.|..+++ +.... ..+.+- +.++.+...+
T Consensus 392 ~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~---~~~~~~-------~~~~~~~~~~ 460 (723)
T 1xfd_A 392 NTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVH-NTTDK---KKMFDL-------ETNEHVKKAI 460 (723)
T ss_dssp CSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEE-ETTTC---CEEEEE-------ECCHHHHHHH
T ss_pred eCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEE-ECCCC---CEEEEe-------ccChhhhhhh
Confidence 98765 56667642 3345567899999999999999999986654 43221 222111 1122222223
Q ss_pred cccceeeeeecccCceeeeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-Ccc--chHHHHHHHHCCcEEEE
Q 003363 550 SSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSS--YSKSLAFLSSVGYSLLI 626 (826)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-~~~--~~~~~~~la~~G~~Vl~ 626 (826)
....+. ..+.+ .+...+| +++++++.|++++..+++|+||++||+++... ... +....+.|+++||+|++
T Consensus 461 ~~~~~~----~~~~~--~~~~~~g-~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~ 533 (723)
T 1xfd_A 461 NDRQMP----KVEYR--DIEIDDY-NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVK 533 (723)
T ss_dssp HTSCCC----BCCBC--CEEETTE-EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEC
T ss_pred hhccCC----CceEE--EEEcCCc-eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEE
Confidence 332221 11111 3344566 89999999998767788999999999887642 222 33556678889999999
Q ss_pred ECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhC----CCceeEEEec
Q 003363 627 VNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA----PDKFVAAAAR 702 (826)
Q Consensus 627 ~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~----p~~~~a~v~~ 702 (826)
+|+||++++|..+.......++...++|+.++++++.+++.+|++||+|+|||+||++++.++.++ |++|+++|+.
T Consensus 534 ~d~rG~g~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~ 613 (723)
T 1xfd_A 534 CDGRGSGFQGTKLLHEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSAL 613 (723)
T ss_dssp CCCTTCSSSHHHHHHTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEE
T ss_pred ECCCCCccccHHHHHHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEc
Confidence 999999999888876666677777899999999999988778999999999999999999999999 9999999999
Q ss_pred CCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCC-CcEEEEEeCCCCCCCcHHHHHH
Q 003363 703 NPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK-TPTIFLLGAQDLRVPVSNGLQY 781 (826)
Q Consensus 703 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~-~PvLii~G~~D~~vp~~~~~~~ 781 (826)
+|+.++..+. ..+.+.+.. .+. ...+.+...++...+.+++ +|+||+||++|.++|+++++++
T Consensus 614 ~~~~~~~~~~-------~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~ 677 (723)
T 1xfd_A 614 SPITDFKLYA-------SAFSERYLG--------LHG-LDNRAYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQHTAEL 677 (723)
T ss_dssp SCCCCTTSSB-------HHHHHHHHC--------CCS-SCCSSTTTTCTHHHHTSCCSCEEEEEEETTCSSSCHHHHHHH
T ss_pred cCCcchHHhh-------hhccHhhcC--------Ccc-CChhHHHhcChhhHHhhcCCCCEEEEEeCCCCCcCHhHHHHH
Confidence 9988764321 111111100 010 0111334456667788999 7999999999999999999999
Q ss_pred HHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 782 ARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 782 ~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
+++|++++++++++++|+++|.+...+...+++..+.+||+++|+
T Consensus 678 ~~~l~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~i~~fl~~~l~ 722 (723)
T 1xfd_A 678 ITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR 722 (723)
T ss_dssp HHHHHHTTCCCEEEEETTCCSSCCCHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHCCCCeEEEEECCCCcccccCcchHHHHHHHHHHHHHHhc
Confidence 999999999999999999999986666667889999999999875
No 5
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=1.2e-50 Score=483.69 Aligned_cols=594 Identities=13% Similarity=0.135 Sum_probs=416.8
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeec-CCccee-cccEEEEeCCCCCeEEEEecCCCC-CCeE
Q 003363 105 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWA-PFPVEM-TGASAVVPSPSGSKLLVVRNPENE-SPIQ 181 (826)
Q Consensus 105 s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~-~~~~~~-~~~~~~~~SPdG~~la~~~~~~~~-~~~~ 181 (826)
+|||++++|...... .....||..+.. +++.+.|... .+..+. ..+..++|||||++|||.....+. ..++
T Consensus 80 ~~dG~~~~~~~~~~~----~~~~~l~~~~~~--~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i 153 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGL----QNQRVLYVQDSL--EGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTI 153 (710)
T ss_dssp EEETTEEEEEEECSS----CSSCEEEEESST--TSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEE
T ss_pred EEECCEEEEEEEcCC----ceEEEEEEEcCC--CCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEE
Confidence 499999999876532 345577876642 3334433322 111110 136789999999999999876532 2367
Q ss_pred EEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceee
Q 003363 182 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (826)
Q Consensus 182 ~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (826)
++++ .+++..+.+...... ..++|||||+.|+|.+.+...... .
T Consensus 154 ~v~d~~tg~~~~~~~~~~~~----------~~~~wspDg~~l~~~~~~~~~~~~--------~----------------- 198 (710)
T 2xdw_A 154 KFMKVDGAKELPDVLERVKF----------SCMAWTHDGKGMFYNAYPQQDGKS--------D----------------- 198 (710)
T ss_dssp EEEETTTTEEEEEEEEEECS----------CCEEECTTSSEEEEEECCCCSSCC--------S-----------------
T ss_pred EEEECCCCCCCcccccCccc----------ceEEEEeCCCEEEEEEECCccccc--------c-----------------
Confidence 7666 566655543222122 689999999999999866531100 0
Q ss_pred cCCCccCCCccCceEEEEEccCCceE--ec-cCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCce
Q 003363 261 EDWGETYAGKRQPSLFVININSGEVQ--AV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 337 (826)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~--~l-~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l 337 (826)
+..........||++++.+++.+ .+ .+.........+.|||||+. |++.+.+... ....|
T Consensus 199 ---~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~----l~~~~~~~~~----------~~~~l 261 (710)
T 2xdw_A 199 ---GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRY----VLLSIREGCD----------PVNRL 261 (710)
T ss_dssp ---SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE----EEEEEECSSS----------SCCEE
T ss_pred ---ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCE----EEEEEEccCC----------CccEE
Confidence 00000113468999999888632 23 11111223557899999999 9998743211 13589
Q ss_pred EEEEcccccchhhhhhhhcCCCCC------C--cceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEE
Q 003363 338 YAVRVSLYKSEASELELKESSSED------L--PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 409 (826)
Q Consensus 338 ~~~d~~~~~~~~~~~~~~~~~~~~------~--~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~ 409 (826)
|++|+ .+ + ..++|+...... ...|+|||++|+|.++.. ....+|+++
T Consensus 262 ~~~d~-----------------~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~-------~~~~~l~~~ 316 (710)
T 2xdw_A 262 WYCDL-----------------QQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRH-------SPNYRLINI 316 (710)
T ss_dssp EEEEG-----------------GGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTT-------CTTCEEEEE
T ss_pred EEEEC-----------------cccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCC-------CCCCEEEEE
Confidence 99998 33 3 467777654443 346999999999998764 235789999
Q ss_pred eCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCc-EEEecCCCC
Q 003363 410 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE-LLRITPAES 488 (826)
Q Consensus 410 d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~-~~~lt~~~~ 488 (826)
|+.+++... ...+++ . .+. ..+..+.|+++ ..|+++...++...|+.+|+.+|+ .+.|....+
T Consensus 317 d~~~~~~~~----~~~l~~---~-~~~-------~~~~~~~~~~~-~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~ 380 (710)
T 2xdw_A 317 DFTDPEESK----WKVLVP---E-HEK-------DVLEWVACVRS-NFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVG 380 (710)
T ss_dssp ETTSCCGGG----CEEEEC---C-CSS-------CEEEEEEEETT-TEEEEEEEETTEEEEEEEETTTCCEEEEECCCSS
T ss_pred eCCCCCccc----ceeccC---C-CCC-------CeEEEEEEEcC-CEEEEEEEECCEEEEEEEECCCCCEEEecCCCCc
Confidence 988754210 011111 0 000 01234578754 468888888899999999996665 577776544
Q ss_pred CeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCC-CceeeeeccCCCCCCCchhhhhcccccceeeeeecccCceee
Q 003363 489 NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKAN-KGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSAN 567 (826)
Q Consensus 489 ~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 567 (826)
.+....++++++.+++..+++.+|.++|++++.+++. ...+ ... ++..++ ...+....+ .
T Consensus 381 ~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l--~~~--~~~~~~--------~~~~~~~~~-------~ 441 (710)
T 2xdw_A 381 SVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVF--REV--TVKGID--------ASDYQTVQI-------F 441 (710)
T ss_dssp EEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEE--EEC--CCTTCC--------GGGEEEEEE-------E
T ss_pred eEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEe--eec--ccCCcC--------ccccEEEEE-------E
Confidence 4444567788999999999999999999999865431 1111 110 111111 111222222 4
Q ss_pred eccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHH-CCcEEEEECCCCCCCCchhhhhcCCCC
Q 003363 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGK 646 (826)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~~~ 646 (826)
+...+|..++++++.|+++...++.|+||++|||++......|......|++ +||+|+++|+||++++|..+.......
T Consensus 442 ~~~~dg~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~g~~~~~~~~~~ 521 (710)
T 2xdw_A 442 YPSKDGTKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMGGVLAVANIRGGGEYGETWHKGGILA 521 (710)
T ss_dssp EECTTSCEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHCCEEEEECCTTSSTTHHHHHHTTSGG
T ss_pred EEcCCCCEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCCcEEEEEccCCCCCCChHHHHhhhhh
Confidence 4556788999999999987667889999999999887665667766677777 999999999999999999988766666
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhc
Q 003363 647 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 726 (826)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 726 (826)
.+...++|+.+++++|++++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+........| ...+
T Consensus 522 ~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~--~~~~ 599 (710)
T 2xdw_A 522 NKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIAQVGVMDMLKFHKYTIGHAW--TTDY 599 (710)
T ss_dssp GTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGG--HHHH
T ss_pred cCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEEcCCcccHhhccccCCChhH--HHhC
Confidence 66677899999999999998899999999999999999999999999999999999999987655432211112 1222
Q ss_pred cCcCCccCCCCCChhhHHHHhhcCcccccC-----CCCC-cEEEEEeCCCCCCCcHHHHHHHHHHHhC-------CCCEE
Q 003363 727 GSKGKDSFTESPSVEDLTRFHSKSPISHIS-----KVKT-PTIFLLGAQDLRVPVSNGLQYARALREK-------GVETK 793 (826)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~-----~i~~-PvLii~G~~D~~vp~~~~~~~~~~l~~~-------g~~~~ 793 (826)
+. ....+..+.+...+|+.++. ++++ |+||+||++|.+||+.++.+++++|+.. |.+++
T Consensus 600 g~--------~~~~~~~~~~~~~sp~~~~~~~~~~~~~~pP~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 671 (710)
T 2xdw_A 600 GC--------SDSKQHFEWLIKYSPLHNVKLPEADDIQYPSMLLLTADHDDRVVPLHSLKFIATLQYIVGRSRKQNNPLL 671 (710)
T ss_dssp CC--------TTSHHHHHHHHHHCGGGCCCCCSSTTCCCCEEEEEEETTCCSSCTHHHHHHHHHHHHHTTTSTTCCSCEE
T ss_pred CC--------CCCHHHHHHHHHhCcHhhhcccccccCCCCcEEEEEeCCCCccChhHHHHHHHHHHhhhccccCCCcCEE
Confidence 22 12345566777889999998 7886 9999999999999999999999999988 89999
Q ss_pred EEEeCCCCCCCCCCC-CHHHHHHHHHHHHHHHcC
Q 003363 794 VIVFPNDVHGIERPQ-SDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 794 ~~~~p~~~H~~~~~~-~~~~~~~~i~~w~~~~l~ 826 (826)
+++++++||++..+. ...+.+..+.+||.++|+
T Consensus 672 ~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 705 (710)
T 2xdw_A 672 IHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLN 705 (710)
T ss_dssp EEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 999999999987653 345788899999999874
No 6
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=7e-51 Score=489.12 Aligned_cols=598 Identities=18% Similarity=0.229 Sum_probs=414.2
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCC-CCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCC
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKEN-ENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESP 179 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~ 179 (826)
.+.+||||++|+|... ..++++++.+.. ...++++... ..+..++|||||++|||+++.
T Consensus 113 ~~~~SpDg~~l~~~~~----------~~i~~~d~~~~~~~~~~~l~~~~-----~~~~~~~~SPDG~~la~~~~~----- 172 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG----------GELYLYDLKQEGKAAVRQLTHGE-----GFATDAKLSPKGGFVSFIRGR----- 172 (741)
T ss_dssp CCEECTTSSEEEEEET----------TEEEEEESSSCSTTSCCBCCCSS-----SCEEEEEECTTSSEEEEEETT-----
T ss_pred eeEECCCCCEEEEEeC----------CcEEEEECCCCCcceEEEcccCC-----cccccccCCCCCCEEEEEeCC-----
Confidence 4556999999999753 478888764321 0455565543 458899999999999999753
Q ss_pred eEEEEe-cCCceeEEEecCCC-----ccccccCCC--cccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCC
Q 003363 180 IQFELW-SQSQLEKEFHVPQT-----VHGSVYADG--WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCN 251 (826)
Q Consensus 180 ~~~~i~-~~~~~~~~~~~~~~-----~~g~v~~~~--~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (826)
+++.++ .+++..+++..... ...++|.++ ....++|||||++|+|.+.+..... .+.. ....++.
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~-~~~~-----~~~~p~~- 245 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVP-VQKR-----YEVYADR- 245 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSC-EEEE-----EEECSSC-
T ss_pred cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCc-eEec-----CCCCCCc-
Confidence 466666 45555554432111 001111100 1267999999999999987653211 0000 0000000
Q ss_pred CCCCcceeecCCCccCCCccCceEEEEEccC-CceEeccCC-CCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeee
Q 003363 252 SWKGQGDWEEDWGETYAGKRQPSLFVININS-GEVQAVKGI-PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 329 (826)
Q Consensus 252 ~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~-g~~~~l~~~-~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~ 329 (826)
.-.....|... |+ ......|+++|+++ ++.+.+... .....+..++| |||+. |++.+....
T Consensus 246 ~~~~~~~~~~~-g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~----l~~~~~~~~-------- 308 (741)
T 2ecf_A 246 TDVIEQRYPAA-GD---ANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQH----LSFQRQSRD-------- 308 (741)
T ss_dssp EEEEEEECCBT-TS---CCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTE----EEEEEEETT--------
T ss_pred ccceEeecCCC-CC---CCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCE----EEEEEeccc--------
Confidence 00001111111 11 11235899999999 988877311 23346678999 99999 998874222
Q ss_pred eccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCc-----cccCceecCCCCEEEEEeccCCCCCCCCcccc
Q 003363 330 CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS-----SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 404 (826)
Q Consensus 330 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~-----~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~ 404 (826)
.....|+++|+ .+++.+.+..... ....+.|||||+ +++.+.++ +..
T Consensus 309 --~~~~~i~~~d~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~--------g~~ 360 (741)
T 2ecf_A 309 --QKKLDLVEVTL-----------------ASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERT--------GFQ 360 (741)
T ss_dssp --SSEEEEEEEET-----------------TTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTT--------SSC
T ss_pred --CCeEEEEEEEC-----------------CCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCC--------Ccc
Confidence 12347999998 6777666654322 346899999999 66776553 347
Q ss_pred eEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCC-ccccCCCEEEEEEEeCC--eEEEEEEECCCCcEE
Q 003363 405 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN-PWLSDGCTMLLSSIWGS--SQVIISVNVSSGELL 481 (826)
Q Consensus 405 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~-~ws~Dg~~l~~~~~~~~--~~~l~~vdl~tg~~~ 481 (826)
+||.+|..++ .+.++..... +..+ .|+|||+.|++.+..++ ...||.+++.++..+
T Consensus 361 ~l~~~~~~~~-~~~l~~~~~~--------------------v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~ 419 (741)
T 2ecf_A 361 HLYRIDSKGK-AAALTHGNWS--------------------VDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQ 419 (741)
T ss_dssp EEEEECSSSC-EEESCCSSSC--------------------EEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCE
T ss_pred EEEEEcCCCC-eeeeeecceE--------------------EEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCee
Confidence 8999987654 4333322211 1233 59999999988887665 778999998877788
Q ss_pred EecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhh-ccccc--ce-eee
Q 003363 482 RITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKS-LLSSR--QF-SIM 557 (826)
Q Consensus 482 ~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~--~~-~~~ 557 (826)
+|+... .+....|++||+.+++..+++..|+++++.+..++. .+. ++..+..+.. .+... .+ ...
T Consensus 420 ~l~~~~-~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~-~~~---------l~~~~~~~~~~~~~~~~~~~~~~~ 488 (741)
T 2ecf_A 420 RLSKAP-GMHSASFARNASVYVDSWSNNSTPPQIELFRANGEK-IAT---------LVENDLADPKHPYARYREAQRPVE 488 (741)
T ss_dssp ECCCSC-SEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCE-EEC---------SSCCCSSSTTSTTHHHHTTCCCEE
T ss_pred ecccCC-CceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCe-EEE---------eccCcccccccchhhhhccCCCcE
Confidence 888743 355678999999999999999999999999864332 111 1111100000 01111 11 111
Q ss_pred eecccCceeeeccCCC-eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-ccch-----HHHHHHHHCCcEEEEECCC
Q 003363 558 KIPVKGVSANLTKGAQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYS-----KSLAFLSSVGYSLLIVNYR 630 (826)
Q Consensus 558 ~~~~~~~~~~~~~~~g-~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~~~-----~~~~~la~~G~~Vl~~d~r 630 (826)
. ..+...+| ..++++++.|++++..+++|+||++||++..... ..|. ..++.|+++||.|+++|+|
T Consensus 489 ~-------~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~r 561 (741)
T 2ecf_A 489 F-------GTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDHLFNQYLAQQGYVVFSLDNR 561 (741)
T ss_dssp E-------EEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHHHHHHHHHHTTCEEEEECCT
T ss_pred E-------EEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchhHHHHHHHhCCCEEEEEecC
Confidence 1 23445577 8999999999876566789999999998876421 2343 5788899999999999999
Q ss_pred CCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh
Q 003363 631 GSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 710 (826)
Q Consensus 631 G~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~ 710 (826)
|+++++..+.......++...++|+.++++++.+++.+|.++|+|+|||+||++++.++.++|++|+++|+.+|+.++..
T Consensus 562 G~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 641 (741)
T 2ecf_A 562 GTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAKASDSYACGVAGAPVTDWGL 641 (741)
T ss_dssp TCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCGGG
T ss_pred CCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHhCCCceEEEEEcCCCcchhh
Confidence 99998888877777777777899999999999998878899999999999999999999999999999999999887643
Q ss_pred hccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCC
Q 003363 711 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 790 (826)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~ 790 (826)
+.. .+...+ ...+ .+..+.+...+|...+.++++|+|++||++|.++|++++.+++++|+..++
T Consensus 642 ~~~-------~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~ 705 (741)
T 2ecf_A 642 YDS-------HYTERY--------MDLP-ARNDAGYREARVLTHIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQ 705 (741)
T ss_dssp SBH-------HHHHHH--------HCCT-GGGHHHHHHHCSGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHHHHTTC
T ss_pred hcc-------ccchhh--------cCCc-ccChhhhhhcCHHHHHhhCCCCEEEEccCCCCCCCHHHHHHHHHHHHHCCC
Confidence 210 111111 1112 244566777899999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 791 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 791 ~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
+++++++|+++|.+..... .++++.+.+||+++|+
T Consensus 706 ~~~~~~~~~~~H~~~~~~~-~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 706 PFELMTYPGAKHGLSGADA-LHRYRVAEAFLGRCLK 740 (741)
T ss_dssp CCEEEEETTCCSSCCHHHH-HHHHHHHHHHHHHHHC
T ss_pred ceEEEEECCCCCCCCCCch-hHHHHHHHHHHHHhcC
Confidence 9999999999999875443 6788999999999986
No 7
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.7e-51 Score=489.74 Aligned_cols=606 Identities=14% Similarity=0.146 Sum_probs=407.7
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCc---cceeecCCcceecccEEEEeCCCCCeEEEEecCCCC
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS---VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENE 177 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~---~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~ 177 (826)
.+.+||||++|+|.......-.......++++++.+ ++. .+++ ..+..++|||||++|||+++.
T Consensus 64 ~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~--g~~~~~~~l~--------~~~~~~~~SPDG~~la~~~~~--- 130 (719)
T 1z68_A 64 NYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN--GEFVRGNELP--------RPIQYLCWSPVGSKLAYVYQN--- 130 (719)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT--TEECCSSCCC--------SSBCCEEECSSTTCEEEEETT---
T ss_pred eEEECCCCCeEEEEecCceeEEeecceEEEEEECCC--CccccceecC--------cccccceECCCCCEEEEEECC---
Confidence 456699999999986543211112346788888643 333 3332 247789999999999999754
Q ss_pred CCeEEEEe-cCCceeEEEecCC------CccccccCCCc---ccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCC
Q 003363 178 SPIQFELW-SQSQLEKEFHVPQ------TVHGSVYADGW---FEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSD 247 (826)
Q Consensus 178 ~~~~~~i~-~~~~~~~~~~~~~------~~~g~v~~~~~---~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~ 247 (826)
.++... .+++..+++.... +...+||.++. ...++|||||++|||.+.+..... .+....... .
T Consensus 131 --~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~-~~~~~~~~~-~-- 204 (719)
T 1z68_A 131 --NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIP-VIAYSYYGD-E-- 204 (719)
T ss_dssp --EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSC-EEEEEECCS-S--
T ss_pred --eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCc-eEEeeccCC-C--
Confidence 355444 4555555442111 11122222221 148999999999999987643211 111000000 0
Q ss_pred ccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceE---eccC----CCCCCccceEEEeeCCCCCccEEEEEeecC
Q 003363 248 KDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ---AVKG----IPKSLSVGQVVWAPLNEGLHQYLVFVGWSS 320 (826)
Q Consensus 248 ~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~---~l~~----~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~ 320 (826)
...-.....|... |. ......|++||+++++.. .+.. ......+..++|||||+ ++|.....
T Consensus 205 --~~~~~~~~~yp~~-g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-----~~~~~~~~ 273 (719)
T 1z68_A 205 --QYPRTINIPYPKA-GA---KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-----VCLQWLKR 273 (719)
T ss_dssp --SSCEEEEEECCBT-TS---CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-----EEEEEEES
T ss_pred --CCccceeecCCCC-CC---CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-----EEEEEecc
Confidence 0000011122211 22 113358999999998752 4410 01233567899999975 65553211
Q ss_pred cceeeeeeeeccCCCceEEEE----cccccchhhhhhhhcCCCCCCcceecC-----CCCcccc-----CceecCCCCEE
Q 003363 321 ETRKLGIKYCYNRPCALYAVR----VSLYKSEASELELKESSSEDLPVVNLT-----ESISSAF-----FPRFSPDGKFL 386 (826)
Q Consensus 321 ~~~~~g~~~~~~~~~~l~~~d----~~~~~~~~~~~~~~~~~~~~~~~~~Lt-----~~~~~~~-----~p~~SpDG~~l 386 (826)
. .....|+++| + .+++.+.++ .+.+.+. .|.|||||+.|
T Consensus 274 ~----------~~~~~l~~~d~~~~~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 326 (719)
T 1z68_A 274 V----------QNVSVLSICDFREDW-----------------QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISY 326 (719)
T ss_dssp S----------TTEEEEEEEEECSSS-----------------SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCE
T ss_pred c----------cCeEEEEEEcccCCC-----------------CCCceEEEEecccccCCceEccccCCccEECCCCCeE
Confidence 1 1123699999 6 666666666 2333344 89999999999
Q ss_pred EEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEe--
Q 003363 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-- 464 (826)
Q Consensus 387 ~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~-- 464 (826)
+|.+... .+..+|+++|+.++..+.++....++ ..+.++ ||+.|+|.+..
T Consensus 327 ~~~~~~~-------~g~~~l~~~~~~~~~~~~lt~~~~~v--------------------~~~~~~-d~~~i~~~~~~~~ 378 (719)
T 1z68_A 327 YKIFSDK-------DGYKHIHYIKDTVENAIQITSGKWEA--------------------INIFRV-TQDSLFYSSNEFE 378 (719)
T ss_dssp EEEEECT-------TSCEEEEEESSCSTTCEECSCSSSCE--------------------EEEEEE-CSSEEEEEESCGG
T ss_pred EEEEEcc-------CCceEEEEEECCCCceEecccCceEE--------------------EEEEEE-eCCEEEEEEecCC
Confidence 9876543 23578999999887655554332211 123445 89999998876
Q ss_pred --CCeEEEEEEECCCC--cEEEecCC----CCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCC
Q 003363 465 --GSSQVIISVNVSSG--ELLRITPA----ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSS 536 (826)
Q Consensus 465 --~~~~~l~~vdl~tg--~~~~lt~~----~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~ 536 (826)
.+..+||.+++++| +.++|+.. ...+....|+++++.+++.++++..| .+++.++.+++ ...
T Consensus 379 ~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~-~~~-------- 448 (719)
T 1z68_A 379 EYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQ-EIK-------- 448 (719)
T ss_dssp GCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCC-EEE--------
T ss_pred CCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCC-EEE--------
Confidence 57789999999777 46777742 22345578999999999999888887 57887765432 111
Q ss_pred CCCCCchhhhhccccccee-eeeecccCceeeeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-Cccch-HH
Q 003363 537 PISRCPEKVKSLLSSRQFS-IMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYS-KS 613 (826)
Q Consensus 537 ~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-~~~~~-~~ 613 (826)
++..|+.+...+....+. ...+ .+...+ .+++++++.|++++..+++|+||++||++.... ...|. ..
T Consensus 449 -~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~ 519 (719)
T 1z68_A 449 -ILEENKELENALKNIQLPKEEIK-------KLEVDE-ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNW 519 (719)
T ss_dssp -EEECCHHHHHHTTSBCCCEEEEE-------EEEETT-EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCH
T ss_pred -EeecchhhhhhhccccCCceEEE-------EEecCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhH
Confidence 122344433333333321 1111 333344 889999999998766788999999999887643 22332 23
Q ss_pred HHHH-HHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhC
Q 003363 614 LAFL-SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA 692 (826)
Q Consensus 614 ~~~l-a~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~ 692 (826)
...| +++||.|+++|+||+++++..+.......++...++|+.++++++.+++.+|++||+|+|||+||++++.++.++
T Consensus 520 ~~~l~~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~ 599 (719)
T 1z68_A 520 ISYLASKEGMVIALVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASG 599 (719)
T ss_dssp HHHHHHTTCCEEEEEECTTBSSSCHHHHGGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTS
T ss_pred HHHHHhcCCeEEEEEcCCCCCCCchhhHHHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhC
Confidence 4444 579999999999999999988877777777777899999999999998878999999999999999999999999
Q ss_pred CCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCC-hhhHHHHhhcCcccccCCCCC-cEEEEEeCCC
Q 003363 693 PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPS-VEDLTRFHSKSPISHISKVKT-PTIFLLGAQD 770 (826)
Q Consensus 693 p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sp~~~~~~i~~-PvLii~G~~D 770 (826)
|++|+++|+.+|+.++..+. ..+.+.+ .+.+. .+..+.+...+|...+.++++ |+|++||++|
T Consensus 600 p~~~~~~v~~~~~~~~~~~~-------~~~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D 664 (719)
T 1z68_A 600 TGLFKCGIAVAPVSSWEYYA-------SVYTERF--------MGLPTKDDNLEHYKNSTVMARAEYFRNVDYLLIHGTAD 664 (719)
T ss_dssp SSCCSEEEEESCCCCTTTSB-------HHHHHHH--------HCCSSTTTTHHHHHHTCSGGGGGGGTTSEEEEEEETTC
T ss_pred CCceEEEEEcCCccChHHhc-------cccchhh--------cCCcccccchhhhhhCCHhHHHhcCCCCcEEEEEeCCC
Confidence 99999999999998764321 1111111 11111 234456777888888999988 8999999999
Q ss_pred CCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 771 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 771 ~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
.+||++++.+++++|++.+++++++++|+++|.+ ..+...+++..+.+||+++|+
T Consensus 665 ~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 665 DNVHFQNSAQIAKALVNAQVDFQAMWYSDQNHGL-SGLSTNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp SSSCTHHHHHHHHHHHHTTCCCEEEEETTCCTTC-CTHHHHHHHHHHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHHHHCCCceEEEEECcCCCCC-CcccHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999998 444566889999999999985
No 8
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=6.3e-50 Score=476.06 Aligned_cols=605 Identities=13% Similarity=0.140 Sum_probs=422.2
Q ss_pred HHHHHhhcCccccceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecC-Ccce-ecccEEEEe
Q 003363 84 KLLQDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAP-FPVE-MTGASAVVP 161 (826)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~-~~~~-~~~~~~~~~ 161 (826)
+|++++..+-.. .-.+..+|||++++|...... .....||..+. .+++.++|+... +..+ ...+..++|
T Consensus 58 ~l~~~~~~~~~~---~~~~~p~~dG~~~~~~~~~~~----~~~~~l~~~~~--~~~~~~~l~d~~~~a~~~~~~~~~~~~ 128 (695)
T 2bkl_A 58 ALAARFKELFYT---DSVSTPSRRNGRFFYVRTHKD----KEKAILYWRQG--ESGQEKVLLDPNGWSKDGTVSLGTWAV 128 (695)
T ss_dssp HHHHHHHHHHSC---CEECCCEEETTEEEEEEECTT----CSSCEEEEEES--TTSCCEEEECGGGSSSSSCEEEEEEEE
T ss_pred HHHHHHHHhhcc---ccCCCCEEECCEEEEEEEcCC----CeEEEEEEEcC--CCCCcEEEEchHHhccCCCEEEEEEEE
Confidence 355555443332 233444689999999876543 23567888764 344556666432 1100 024778999
Q ss_pred CCCCCeEEEEecCCC-CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCC
Q 003363 162 SPSGSKLLVVRNPEN-ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 239 (826)
Q Consensus 162 SPdG~~la~~~~~~~-~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~ 239 (826)
||||++|||.....+ +..++++++ .+++..+...+... .+..++|||||+.|+|.+.+.....
T Consensus 129 SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~---------~~~~~~wspDg~~l~~~~~d~~~~~------ 193 (695)
T 2bkl_A 129 SWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG---------KYATPKWTPDSKGFYYEWLPTDPSI------ 193 (695)
T ss_dssp CTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC---------TTCCCEECTTSSEEEEEECCCCTTS------
T ss_pred CCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc---------cccceEEecCCCEEEEEEecCCCCC------
Confidence 999999999987653 345676666 45543211111111 1258999999999999987642110
Q ss_pred CCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCce--EeccCCC-CCCccceEEEeeCCCCCccEEEEE
Q 003363 240 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFV 316 (826)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~--~~l~~~~-~~~~~~~~~wSPDg~~~~~~lvf~ 316 (826)
.........+||++++.+++. +.+...+ .......+.|||||+. |++.
T Consensus 194 -------------------------~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~----l~~~ 244 (695)
T 2bkl_A 194 -------------------------KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKY----LFVY 244 (695)
T ss_dssp -------------------------CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCC----EEEE
T ss_pred -------------------------ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCE----EEEE
Confidence 000011347899999998873 2332122 2235668899999999 9998
Q ss_pred eecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCC
Q 003363 317 GWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVD 396 (826)
Q Consensus 317 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~ 396 (826)
+.... ....||+++. .+++.++|+........+.| +||+ |++.++.+
T Consensus 245 ~~~~~-----------~~~~l~~~~~-----------------~~~~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~--- 291 (695)
T 2bkl_A 245 ILRGW-----------SENDVYWKRP-----------------GEKDFRLLVKGVGAKYEVHA-WKDR-FYVLTDEG--- 291 (695)
T ss_dssp EEETT-----------TEEEEEEECT-----------------TCSSCEEEEECSSCCEEEEE-ETTE-EEEEECTT---
T ss_pred EeCCC-----------CceEEEEEcC-----------------CCCceEEeecCCCceEEEEe-cCCc-EEEEECCC---
Confidence 75331 1237898886 56778888877666677777 7888 88877653
Q ss_pred CCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECC
Q 003363 397 SGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 476 (826)
Q Consensus 397 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~ 476 (826)
.....|+++|+.+++.... ..+++ ...+ ..+..+.|+ + ..|+++...++..+|+.+++.
T Consensus 292 ----~~~~~l~~~d~~~~~~~~~----~~l~~---~~~~--------~~l~~~~~~-~-~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 292 ----APRQRVFEVDPAKPARASW----KEIVP---EDSS--------ASLLSVSIV-G-GHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp ----CTTCEEEEEBTTBCSGGGC----EEEEC---CCSS--------CEEEEEEEE-T-TEEEEEEEETTEEEEEEEETT
T ss_pred ----CCCCEEEEEeCCCCCccCC----eEEec---CCCC--------CeEEEEEEE-C-CEEEEEEEECCEEEEEEEeCC
Confidence 2357899999877643110 01111 0000 012245666 4 468888888899999999987
Q ss_pred CCcEEEecCC-CCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhhccccccee
Q 003363 477 SGELLRITPA-ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFS 555 (826)
Q Consensus 477 tg~~~~lt~~-~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 555 (826)
++..+.+... .+.+....++++++.+++..+++.+|.++|+.++.+++ ...+ ... +. .++ ...+.
T Consensus 351 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~-~~~l--~~~--~~-~~~--------~~~~~ 416 (695)
T 2bkl_A 351 GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK-SELW--AKV--DV-PMN--------PEQYQ 416 (695)
T ss_dssp CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC-EEEE--EEC--CC-SSC--------GGGEE
T ss_pred CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc-EEEE--ecC--CC-CCC--------HHHCe
Confidence 6667777644 33334445678899999999999999999999986553 1111 110 00 011 11122
Q ss_pred eeeecccCceeeeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCC
Q 003363 556 IMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGF 635 (826)
Q Consensus 556 ~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~ 635 (826)
...+ .+...+|..++++++.|+++...++.|+||++|||++......|....+.|+++||+|+++|+||++++
T Consensus 417 ~~~~-------~~~~~dg~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~ 489 (695)
T 2bkl_A 417 VEQV-------FYASKDGTKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLDAGGVYAVANLRGGGEY 489 (695)
T ss_dssp EEEE-------EEECTTSCEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHHTTCEEEEECCTTSSTT
T ss_pred EEEE-------EEECCCCCEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHhCCCEEEEEecCCCCCc
Confidence 2222 445567889999999999766678899999999998876555676667778899999999999999999
Q ss_pred chhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCC
Q 003363 636 GEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT 715 (826)
Q Consensus 636 G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~ 715 (826)
|..+............++|+.+++++|++++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+....
T Consensus 490 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~ 569 (695)
T 2bkl_A 490 GKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVVCAVPLLDMVRYHLFG 569 (695)
T ss_dssp CHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGST
T ss_pred CHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEEEcCCccchhhccccC
Confidence 99988766656666778999999999999988999999999999999999999999999999999999999876543322
Q ss_pred CCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCC--CcEEEEEeCCCCCCCcHHHHHHHHHHHh---CCC
Q 003363 716 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQYARALRE---KGV 790 (826)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~PvLii~G~~D~~vp~~~~~~~~~~l~~---~g~ 790 (826)
.. ......++. ....+..+.+...+|+.++.+++ +|+||+||++|.+||+.++.+++++|+. .|.
T Consensus 570 ~~--~~~~~~~g~--------~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~ 639 (695)
T 2bkl_A 570 SG--RTWIPEYGT--------AEKPEDFKTLHAYSPYHHVRPDVRYPALLMMAADHDDRVDPMHARKFVAAVQNSPGNPA 639 (695)
T ss_dssp TG--GGGHHHHCC--------TTSHHHHHHHHHHCGGGCCCSSCCCCEEEEEEETTCSSSCTHHHHHHHHHHHTSTTCCS
T ss_pred CC--cchHHHhCC--------CCCHHHHHHHHhcChHhhhhhcCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhhccCCC
Confidence 11 111122222 11234566677889999998876 7999999999999999999999999998 678
Q ss_pred CEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHHHcC
Q 003363 791 ETKVIVFPNDVHGIERP-QSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 791 ~~~~~~~p~~~H~~~~~-~~~~~~~~~i~~w~~~~l~ 826 (826)
++++++++++||++..+ ....+.+..+++||.++|+
T Consensus 640 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 676 (695)
T 2bkl_A 640 TALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVLD 676 (695)
T ss_dssp CEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999998643 3345778889999999874
No 9
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=2.9e-49 Score=473.62 Aligned_cols=589 Identities=14% Similarity=0.135 Sum_probs=404.3
Q ss_pred EEecCCCCcceEEEEEeechhhcccceeEEEEEEeec-CCCCccceeecC-Cccee-cccEEEEeCCCCCeEEEEecCCC
Q 003363 100 TFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISK-ENENSVTFQWAP-FPVEM-TGASAVVPSPSGSKLLVVRNPEN 176 (826)
Q Consensus 100 ~~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~-~~~~~~~lt~~~-~~~~~-~~~~~~~~SPdG~~la~~~~~~~ 176 (826)
..+..+|||++++|...... .....||..+... ++++..+|.+.. +..+. ..+..++|||||++|||.....+
T Consensus 110 ~~~~p~pdG~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G 185 (741)
T 1yr2_A 110 RFGLPQRRGASVFYSWNSGL----MNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGG 185 (741)
T ss_dssp EECCCEEETTEEEEEEECSS----CSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETT
T ss_pred ccCCCEEECCEEEEEEEcCC----CeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCC
Confidence 34445699999999876543 3356788876421 033444443322 11110 24678999999999999987643
Q ss_pred C-CCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCC
Q 003363 177 E-SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 254 (826)
Q Consensus 177 ~-~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (826)
. ..++++++ .+++..+....... +..++|||| +.|+|.+.+.....
T Consensus 186 ~e~~~i~v~dl~tg~~~~~~~~~~~----------~~~~~wspD-~~l~~~~~~~~~~~--------------------- 233 (741)
T 1yr2_A 186 SDWRTVKFVGVADGKPLADELKWVK----------FSGLAWLGN-DALLYSRFAEPKEG--------------------- 233 (741)
T ss_dssp CSEEEEEEEETTTCCEEEEEEEEEE----------SCCCEESTT-SEEEEEECCCC------------------------
T ss_pred CceEEEEEEECCCCCCCCccCCCce----------eccEEEECC-CEEEEEEecCcccc---------------------
Confidence 2 24566666 55555443211111 158899999 99999976542100
Q ss_pred CcceeecCCCccCCCccCceEEEEEccCCce--EeccCCCC-CCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeec
Q 003363 255 GQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCY 331 (826)
Q Consensus 255 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~--~~l~~~~~-~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~ 331 (826)
++.........||++++.++.. +.+...+. ......+.|||||+. |+|.+.+..
T Consensus 234 ---------~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~----l~~~~~~~~---------- 290 (741)
T 1yr2_A 234 ---------QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRW----VVITSSEGT---------- 290 (741)
T ss_dssp --------------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE----EEEEEECTT----------
T ss_pred ---------cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCE----EEEEEEccC----------
Confidence 0000011246799999988763 23321122 123568899999999 999885331
Q ss_pred cCCCceEEEEcccccchhhhhhhhcCCCCCC--c-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEE
Q 003363 332 NRPCALYAVRVSLYKSEASELELKESSSEDL--P-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHR 408 (826)
Q Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~ 408 (826)
+....||++|+ +++ + .++|+........+ ++|||++|+|.+++. ....+|++
T Consensus 291 ~~~~~l~~~d~-----------------~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~-------~~~~~l~~ 345 (741)
T 1yr2_A 291 DPVNTVHVARV-----------------TNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDG-------APLKKIVR 345 (741)
T ss_dssp CSCCEEEEEEE-----------------ETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTT-------CTTCEEEE
T ss_pred CCcceEEEEEC-----------------CCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCC-------CCCCEEEE
Confidence 12348999998 555 5 77787665555555 469999999998774 23578999
Q ss_pred EeCCCCC--CCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC
Q 003363 409 IDWPTNG--NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA 486 (826)
Q Consensus 409 ~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~ 486 (826)
+|+.++. .+.+...... .+..+.|+ +..|+++...++..+|+.++++++..+.|+..
T Consensus 346 ~d~~~~~~~~~~l~~~~~~-------------------~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~ 404 (741)
T 1yr2_A 346 VDLSGSTPRFDTVVPESKD-------------------NLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLP 404 (741)
T ss_dssp EECSSSSCEEEEEECCCSS-------------------EEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCS
T ss_pred EeCCCCccccEEEecCCCC-------------------eEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCC
Confidence 9987742 1111111100 11234555 45788888889999999999977777777653
Q ss_pred -CCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhhcccccceeeeeecccCce
Q 003363 487 -ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVS 565 (826)
Q Consensus 487 -~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 565 (826)
.+.+....++++++.+++..++..+|.++|++++.+++ ...+ +. +...++ ...+....+
T Consensus 405 ~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~-~~~l--~~---~~~~~~--------~~~~~~~~~------ 464 (741)
T 1yr2_A 405 GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK-TTPW--EP---VHLTFD--------PADFRVEQV------ 464 (741)
T ss_dssp SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE-EEEC--SC---CCCSSC--------GGGEEEEEE------
T ss_pred CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc-EEEE--ec---CCCCCC--------hhHCEEEEE------
Confidence 34445556788999999999999999999999986543 1111 10 000111 111222222
Q ss_pred eeeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCC
Q 003363 566 ANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 645 (826)
Q Consensus 566 ~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~ 645 (826)
.+...+|..++++++.|++. .++.|+||++|||++......|......|+++||+|+++|+||++++|..+......
T Consensus 465 -~~~~~dg~~i~~~~~~p~~~--~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~g~~~~~~~~~ 541 (741)
T 1yr2_A 465 -FYPSKDGTKVPMFIVRRKDA--KGPLPTLLYGYGGFNVALTPWFSAGFMTWIDSGGAFALANLRGGGEYGDAWHDAGRR 541 (741)
T ss_dssp -EEECTTSCEEEEEEEEETTC--CSCCCEEEECCCCTTCCCCCCCCHHHHHHHTTTCEEEEECCTTSSTTHHHHHHTTSG
T ss_pred -EEEcCCCCEEEEEEEecCCC--CCCCcEEEEECCCCCccCCCCcCHHHHHHHHCCcEEEEEecCCCCCCCHHHHHhhhh
Confidence 44556788999999999864 568899999999988766567777778899999999999999999999998876655
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhh
Q 003363 646 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 725 (826)
Q Consensus 646 ~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~ 725 (826)
.++...++|+.+++++|++++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+........| ...
T Consensus 542 ~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~~~~~v~~~~~~d~~~~~~~~~~~~~--~~~ 619 (741)
T 1yr2_A 542 DKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDLFAAASPAVGVMDMLRFDQFTAGRYW--VDD 619 (741)
T ss_dssp GGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTSGGGSTTGGGG--HHH
T ss_pred hcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchhheEEEecCCccccccccCCCCCchh--HHH
Confidence 566667999999999999998899999999999999999999999999999999999999987654322211111 122
Q ss_pred ccCcCCccCCCCCChhhHHHHhhcCcccccCC-CCC-cEEEEEeCCCCCCCcHHHHHHHHHHHh---CCCCEEEEEeCCC
Q 003363 726 YGSKGKDSFTESPSVEDLTRFHSKSPISHISK-VKT-PTIFLLGAQDLRVPVSNGLQYARALRE---KGVETKVIVFPND 800 (826)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~-i~~-PvLii~G~~D~~vp~~~~~~~~~~l~~---~g~~~~~~~~p~~ 800 (826)
++. ....+..+.+...+|+.++.+ +++ |+||+||++|.+||+.++.+++++|+. .|.++++++++++
T Consensus 620 ~g~--------~~~~~~~~~~~~~sp~~~~~~~~~~~P~Li~~G~~D~~v~~~~~~~~~~~l~~~~~~g~~~~l~~~~~~ 691 (741)
T 1yr2_A 620 YGY--------PEKEADWRVLRRYSPYHNVRSGVDYPAILVTTADTDDRVVPGHSFKYTAALQTAAIGPKPHLIRIETRA 691 (741)
T ss_dssp HCC--------TTSHHHHHHHHTTCGGGCCCTTSCCCEEEEEECSCCSSSCTHHHHHHHHHHHHSCCCSSCEEEEEC---
T ss_pred cCC--------CCCHHHHHHHHHcCchhhhhccCCCCCEEEEeeCCCCCCChhHHHHHHHHHhhhhcCCCCEEEEEeCCC
Confidence 221 112355667788999999987 884 999999999999999999999999999 8899999999999
Q ss_pred CCCCCCCC-CHHHHHHHHHHHHHHHcC
Q 003363 801 VHGIERPQ-SDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 801 ~H~~~~~~-~~~~~~~~i~~w~~~~l~ 826 (826)
||++..+. ...+.+..+.+||.++|+
T Consensus 692 gH~~~~~~~~~~~~~~~~~~fl~~~l~ 718 (741)
T 1yr2_A 692 GHGSGKPIDKQIEETADVQAFLAHFTG 718 (741)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHT
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHHHcC
Confidence 99986543 335778899999999874
No 10
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=1.1e-49 Score=475.84 Aligned_cols=592 Identities=17% Similarity=0.221 Sum_probs=406.6
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (826)
...+||| +.++|..+ ..++++++. +++.++++... ..+..++|||||++|||+.+. .
T Consensus 86 ~~~~spd-~~~~~~~~----------~~i~~~d~~--~~~~~~l~~~~-----~~~~~~~~SpdG~~la~~~~~-----~ 142 (706)
T 2z3z_A 86 RTLDAGR-GLVVLFTQ----------GGLVGFDML--ARKVTYLFDTN-----EETASLDFSPVGDRVAYVRNH-----N 142 (706)
T ss_dssp EEEETTT-TEEEEEET----------TEEEEEETT--TTEEEEEECCT-----TCCTTCEECTTSSEEEEEETT-----E
T ss_pred eEEECCC-CeEEEEEC----------CEEEEEECC--CCceEEccCCc-----ccccCCcCCCCCCEEEEEECC-----e
Confidence 3445899 88888742 467777763 33455555443 346778999999999997543 3
Q ss_pred EEEEe-cC-----CceeEEEecCCCc--ccc-ccCCC--cccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcc
Q 003363 181 QFELW-SQ-----SQLEKEFHVPQTV--HGS-VYADG--WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKD 249 (826)
Q Consensus 181 ~~~i~-~~-----~~~~~~~~~~~~~--~g~-v~~~~--~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (826)
++... .+ ++..+++...... .|. +|.++ ....++|||||++|||.+.+..... .+.............
T Consensus 143 i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~-~~~~~~~~~~~~~~~ 221 (706)
T 2z3z_A 143 LYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVK-PTPIVDYHPLEAESK 221 (706)
T ss_dssp EEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSC-CEEEEECCSSSCEEE
T ss_pred EEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCc-eEEeeccCCCCCceE
Confidence 55555 44 5555544322110 000 11111 1368999999999999985443211 111000000000000
Q ss_pred CCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccC-CCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeee
Q 003363 250 CNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIK 328 (826)
Q Consensus 250 ~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~-~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~ 328 (826)
...|. ..|. ......|++||+++++.+.+.. ......+..++|||||+. |++.+.....
T Consensus 222 ------~~~y~-~~g~---~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~----l~~~~~~~~~------ 281 (706)
T 2z3z_A 222 ------PLYYP-MAGT---PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI----LYVAEVNRAQ------ 281 (706)
T ss_dssp ------EECCC-BTTS---CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE----EEEEEECTTS------
T ss_pred ------EeeCC-CCCC---CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE----EEEEEeCCCC------
Confidence 00111 1111 1134789999999999887731 122345678999999998 9887632211
Q ss_pred eeccCCCceEEEEcccccchhhhhhhhcCCCCCC-cceecCCC--Cc---cccCceecC--CCCEEEEEeccCCCCCCCC
Q 003363 329 YCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTES--IS---SAFFPRFSP--DGKFLVFLSAKSSVDSGAH 400 (826)
Q Consensus 329 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt~~--~~---~~~~p~~Sp--DG~~l~f~s~~~~~~~g~~ 400 (826)
....|+++|+ .++ ..+.+... .. ....+.||| ||+.| +.+.++
T Consensus 282 ----~~~~v~~~d~-----------------~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l-~~~~~~------- 332 (706)
T 2z3z_A 282 ----NECKVNAYDA-----------------ETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFI-WQSRRD------- 332 (706)
T ss_dssp ----CEEEEEEEET-----------------TTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEE-EEECTT-------
T ss_pred ----CeeEEEEEEC-----------------CCCceeeEEEEccCCCeECccCCceeecCCCCEEE-EEEccC-------
Confidence 2237999998 666 45544322 11 135689999 99854 555443
Q ss_pred cccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCC-CccccCCCEEEEEEEeCC--eEEEEEEECCC
Q 003363 401 SATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS-NPWLSDGCTMLLSSIWGS--SQVIISVNVSS 477 (826)
Q Consensus 401 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~-~~ws~Dg~~l~~~~~~~~--~~~l~~vdl~t 477 (826)
+..+||.+|..++....++..... +.. +.|+|||+.|++.+...+ ...||.+|+.+
T Consensus 333 -g~~~l~~~~~~~~~~~~l~~~~~~--------------------v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 333 -GWNHLYLYDTTGRLIRQVTKGEWE--------------------VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp -SSCEEEEEETTSCEEEECCCSSSC--------------------EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred -CccEEEEEECCCCEEEecCCCCeE--------------------EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 347899998655433333322111 112 579999999998876654 57999999999
Q ss_pred CcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhhcccccceeee
Q 003363 478 GELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIM 557 (826)
Q Consensus 478 g~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 557 (826)
++.++++.... +....|++||+.+++..++...|+++++.++.+++ ..+ ++..+. +....+
T Consensus 392 ~~~~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~--~~~--------~~~~~~-----~~~~~~--- 452 (706)
T 2z3z_A 392 GKTKDLTPESG-MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS--HTL--------LEAKNP-----DTGYAM--- 452 (706)
T ss_dssp CCCEESCCSSS-EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE--EEE--------EECC-----------CC---
T ss_pred CCceeccCCCc-eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe--Eee--------ccccch-----hhhcCC---
Confidence 99888885443 55678999999999999999999999999976442 111 111110 111111
Q ss_pred eecccCceeeeccCCC-eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-ccchH----HHHHHHHCCcEEEEECCCC
Q 003363 558 KIPVKGVSANLTKGAQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSK----SLAFLSSVGYSLLIVNYRG 631 (826)
Q Consensus 558 ~~~~~~~~~~~~~~~g-~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~~~~----~~~~la~~G~~Vl~~d~rG 631 (826)
+.. ....+...+| ..++++++.|++++..+++|+||++|||++.... ..|.. .++.|+++||.|+++|+||
T Consensus 453 --~~~-~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~~v~~~d~rG 529 (706)
T 2z3z_A 453 --PEI-RTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGYAVFTVDSRG 529 (706)
T ss_dssp --CCE-EEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTCEEEEECCTT
T ss_pred --CCc-EEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCcEEEEEecCC
Confidence 100 0123445567 7899999999987667789999999998876532 34544 5788999999999999999
Q ss_pred CCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhh
Q 003363 632 SLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 711 (826)
Q Consensus 632 ~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~ 711 (826)
+++++..+.......++...++|+.++++++.+++.+|.+|++|+|||+||++++.++.++|++|+++|+.+|+.++..+
T Consensus 530 ~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~ 609 (706)
T 2z3z_A 530 SANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGGPVIDWNRY 609 (706)
T ss_dssp CSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCCCCGGGS
T ss_pred CcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEcCCccchHHH
Confidence 99998888777777777778999999999999888889999999999999999999999999999999999998876432
Q ss_pred ccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCC
Q 003363 712 VGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 791 (826)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~ 791 (826)
. ..+.+.+ ...+ .+..+.+...+|...+.++++|+|++||++|.+||++++++++++|++.+++
T Consensus 610 ~-------~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~l~~~~~~ 673 (706)
T 2z3z_A 610 A-------IMYGERY--------FDAP-QENPEGYDAANLLKRAGDLKGRLMLIHGAIDPVVVWQHSLLFLDACVKARTY 673 (706)
T ss_dssp B-------HHHHHHH--------HCCT-TTCHHHHHHHCGGGGGGGCCSEEEEEEETTCSSSCTHHHHHHHHHHHHHTCC
T ss_pred H-------hhhhhhh--------cCCc-ccChhhhhhCCHhHhHHhCCCCEEEEeeCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 1 0111111 1112 2334566778898999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 792 TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 792 ~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
++++++|+++|.+... ...++++.+.+||+++|
T Consensus 674 ~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 674 PDYYVYPSHEHNVMGP-DRVHLYETITRYFTDHL 706 (706)
T ss_dssp CEEEEETTCCSSCCTT-HHHHHHHHHHHHHHHHC
T ss_pred eEEEEeCCCCCCCCcc-cHHHHHHHHHHHHHHhC
Confidence 9999999999998765 55688999999999986
No 11
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=9.9e-49 Score=464.55 Aligned_cols=603 Identities=15% Similarity=0.131 Sum_probs=412.6
Q ss_pred HHHHHHhhcCccccceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcce-ecccEEEEe
Q 003363 83 SKLLQDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVE-MTGASAVVP 161 (826)
Q Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~-~~~~~~~~~ 161 (826)
.+|+++++++-.. .-.+..+.+|.+..|...... .....+|.... .+++.+.|....+..+ ...+..++|
T Consensus 66 ~~l~~~~~~~~~~---~~~~~p~~~g~~~y~~~~~~~----~~~~~~~r~~~--~~~~~vllD~n~la~~~~~~l~~~~~ 136 (693)
T 3iuj_A 66 AAIKEKLAASWNY---AKEGAPFREGRYHYFFKNDGL----QNQNVLWRQQE--GKPAEVFLDPNTLSPDGTTALDQLSF 136 (693)
T ss_dssp HHHHHHHHHHSCC---CEECCCEEETTEEEEEEECSS----CSSCEEEEECT--TSCCEEEECGGGGSTTSCCEEEEEEE
T ss_pred HHHHHHHHHhhcc---ccCCCCEEECCEEEEEEEcCC----CceeEEEEeCC--CCCcEEEEehhhccCCCcEEEEEEEE
Confidence 3455666543322 223333567777777654332 22334444321 2222222211111110 023667899
Q ss_pred CCCCCeEEEEecCCCC-CCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCC
Q 003363 162 SPSGSKLLVVRNPENE-SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 239 (826)
Q Consensus 162 SPdG~~la~~~~~~~~-~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~ 239 (826)
||||++|||..+..+. ...+++++ .+++..+.+ ..... +..++|| ||+.|+|.+.+....
T Consensus 137 SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k---------~~~~~Ws-Dg~~l~y~~~~~~~~------- 198 (693)
T 3iuj_A 137 SRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVK---------FSGISWL-GNEGFFYSSYDKPDG------- 198 (693)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEE---------SCCCEEE-TTTEEEEEESSCCC--------
T ss_pred CCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCce---------eccEEEe-CCCEEEEEEecCccc-------
Confidence 9999999998876532 34566666 556544432 11110 1688999 999999998764210
Q ss_pred CCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCce--EeccCCCC--CCccceEEEeeCCCCCccEEEE
Q 003363 240 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPK--SLSVGQVVWAPLNEGLHQYLVF 315 (826)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~--~~l~~~~~--~~~~~~~~wSPDg~~~~~~lvf 315 (826)
++.........||++++.++.. +.+...+. ......+.|||||+. |++
T Consensus 199 ------------------------~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~----l~~ 250 (693)
T 3iuj_A 199 ------------------------SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRF----LLI 250 (693)
T ss_dssp ------------------------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCE----EEE
T ss_pred ------------------------ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCE----EEE
Confidence 0000011346899999987653 33421121 223457899999999 999
Q ss_pred EeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCC--cceecCCCCccccCceecCCCCEEEEEeccC
Q 003363 316 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVVNLTESISSAFFPRFSPDGKFLVFLSAKS 393 (826)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~ 393 (826)
...... ..+.||++|+ +++ +.++|+........+ |++||++|+|.++++
T Consensus 251 ~~~~~~-----------~~~~i~~~d~-----------------~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~ 301 (693)
T 3iuj_A 251 SAANST-----------SGNRLYVKDL-----------------SQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRD 301 (693)
T ss_dssp EEESSS-----------SCCEEEEEET-----------------TSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTT
T ss_pred EEccCC-----------CCcEEEEEEC-----------------CCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCC
Confidence 874322 2248999998 433 677887765555555 899999999998875
Q ss_pred CCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003363 394 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (826)
Q Consensus 394 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~v 473 (826)
....+|+.+|+.+++.... ..+++ .. . .. . .|+++|+.|++....++...|+.+
T Consensus 302 -------~~~~~l~~~d~~~~~~~~~----~~l~~---~~--~--------~~-~-~~s~~g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 302 -------APNRRLVTVDAANPGPAHW----RDLIP---ER--Q--------QV-L-TVHSGSGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp -------CTTCEEEEEETTSCCGGGC----EEEEC---CC--S--------SC-E-EEEEETTEEEEEEEETTEEEEEEE
T ss_pred -------CCCCEEEEEeCCCCCcccc----EEEec---CC--C--------CE-E-EEEEECCEEEEEEEECCeeEEEEE
Confidence 2357899999987654111 11111 10 0 11 1 799999999999988999999999
Q ss_pred ECCCCcEEEecCCC-CCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhhccccc
Q 003363 474 NVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSR 552 (826)
Q Consensus 474 dl~tg~~~~lt~~~-~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 552 (826)
|++++..+.|.... +.+....++++++.+++..+++.+|++++.+++.+++ ...+ .. .+.. +...
T Consensus 356 d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~-~~~l--~~-------~~~~----~~~~ 421 (693)
T 3iuj_A 356 DYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA-ISLY--RA-------SAAP----FKPE 421 (693)
T ss_dssp CTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC-EEEE--EC-------CCSS----CCGG
T ss_pred ECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe-EEEE--Ee-------CCCC----cChh
Confidence 99988888886543 3333345567899999999999999999999986543 1111 11 1100 1111
Q ss_pred ceeeeeecccCceeeeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCC
Q 003363 553 QFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGS 632 (826)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~ 632 (826)
.+....+ .+...+|..++++++.|++....++.|+||++|||++......|...+..|+++||+|+++|+||+
T Consensus 422 ~~~~~~~-------~~~~~dg~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~ 494 (693)
T 3iuj_A 422 DYVSEQR-------FYQSKDGTRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVANWLDLGGVYAVANLRGG 494 (693)
T ss_dssp GEEEEEE-------EEECTTSCEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHHHTTCEEEEECCTTS
T ss_pred hCeeEEE-------EEecCCCcEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHHHHHHCCCEEEEEeCCCC
Confidence 2222222 445567889999999999876678899999999998876667788888899999999999999999
Q ss_pred CCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc
Q 003363 633 LGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 712 (826)
Q Consensus 633 ~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~ 712 (826)
+++|..|........+...++|+.+++++|++++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+.
T Consensus 495 g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~~~~a~v~~~~~~d~~~~~ 574 (693)
T 3iuj_A 495 GEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPDLMRVALPAVGVLDMLRYH 574 (693)
T ss_dssp STTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCCTTTGG
T ss_pred CccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCccceeEEEecCCcchhhhhc
Confidence 99999998877777777789999999999999998999999999999999999999999999999999999999876543
Q ss_pred cCCCCCCchhhhhccCcCCccCCCCCChhh-HHHHhhcCcccccCC-CCCc-EEEEEeCCCCCCCcHHHHHHHHHHHhC-
Q 003363 713 GTTDIPDWCYVESYGSKGKDSFTESPSVED-LTRFHSKSPISHISK-VKTP-TIFLLGAQDLRVPVSNGLQYARALREK- 788 (826)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sp~~~~~~-i~~P-vLii~G~~D~~vp~~~~~~~~~~l~~~- 788 (826)
.......| ...++. ....+. .+.+...+|+.++.+ +++| +||+||++|.+||+.++.+++++|+..
T Consensus 575 ~~~~~~~~--~~~~g~--------p~~~~~~~~~~~~~sp~~~~~~~~~~Pp~Li~~G~~D~~v~~~~~~~~~~~l~~~~ 644 (693)
T 3iuj_A 575 TFTAGTGW--AYDYGT--------SADSEAMFDYLKGYSPLHNVRPGVSYPSTMVTTADHDDRVVPAHSFKFAATLQADN 644 (693)
T ss_dssp GSGGGGGC--HHHHCC--------TTSCHHHHHHHHHHCHHHHCCTTCCCCEEEEEEESSCSSSCTHHHHHHHHHHHHHC
T ss_pred cCCCchhH--HHHcCC--------ccCHHHHHHHHHhcCHHHhhcccCCCCceeEEecCCCCCCChhHHHHHHHHHHhhC
Confidence 22111112 112222 112233 556778899999999 8987 999999999999999999999999988
Q ss_pred --CCCEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHHHcC
Q 003363 789 --GVETKVIVFPNDVHGIERP-QSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 789 --g~~~~~~~~p~~~H~~~~~-~~~~~~~~~i~~w~~~~l~ 826 (826)
|+++++++++++||++..+ ....+.+..+.+||.++|+
T Consensus 645 ~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 685 (693)
T 3iuj_A 645 AGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMG 685 (693)
T ss_dssp CSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcC
Confidence 5899999999999998764 4556778899999999875
No 12
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=3.7e-47 Score=453.42 Aligned_cols=598 Identities=14% Similarity=0.111 Sum_probs=405.7
Q ss_pred HHHHHHhhcCccccceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeec-CCC---CccceeecCCcc--eeccc
Q 003363 83 SKLLQDFTNISSIDKAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISK-ENE---NSVTFQWAPFPV--EMTGA 156 (826)
Q Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~-~~~---~~~~lt~~~~~~--~~~~~ 156 (826)
.+|+++++..-.... .....++|.++.|...... +....++...... .++ +.+.|....+.. +....
T Consensus 104 ~~l~~e~~~~~~~~~---~~~p~~~g~~~yy~~~~~g----~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~ 176 (751)
T 2xe4_A 104 DDIYAEHISHINEDD---MSAPYVYGKYRYYTREVKG----KPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDV 176 (751)
T ss_dssp HHHHHHHHHTSCSSE---ECCCEEETTEEEEEEECTT----CCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEE
T ss_pred HHHHHHHHHhccccc---CCCCeEECCEEEEEEECCC----CceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEE
Confidence 446666665433332 2222368999989865332 2234455544210 222 223332221110 00136
Q ss_pred EEEEeC-CCCCeEEEEecCCC-CCCeEEEEe-cCC-ceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 157 SAVVPS-PSGSKLLVVRNPEN-ESPIQFELW-SQS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 157 ~~~~~S-PdG~~la~~~~~~~-~~~~~~~i~-~~~-~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
..++|| |||++|||+.+..+ +..++++++ .++ +. + .....+ .+.+++|||||+.|+|++.+...
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l---~~~~~~------~~~~~~WspDg~~l~y~~~d~~~- 244 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--I---ADKVSG------TNGEIVWGPDHTSLFYVTKDETL- 244 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--C---CCCEEE------ECSCCEECSSTTEEEEEEECTTC-
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--C---CccccC------ceeeEEEecCCCEEEEEEECCCC-
Confidence 789999 99999999987653 234577777 444 31 1 111100 12689999999999999764310
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceE--eccCCCCCCccceEEEeeCCCCCc
Q 003363 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ--AVKGIPKSLSVGQVVWAPLNEGLH 310 (826)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~--~l~~~~~~~~~~~~~wSPDg~~~~ 310 (826)
...+||++++.+++.+ .+...+.......+.|||||+.
T Consensus 245 --------------------------------------~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~-- 284 (751)
T 2xe4_A 245 --------------------------------------RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNT-- 284 (751)
T ss_dssp --------------------------------------CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSE--
T ss_pred --------------------------------------CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCE--
Confidence 2258999999887532 3311122223457899999999
Q ss_pred cEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCC--cc--eecCCCCccccCceecCC---C
Q 003363 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PV--VNLTESISSAFFPRFSPD---G 383 (826)
Q Consensus 311 ~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~--~~Lt~~~~~~~~p~~SpD---G 383 (826)
|+|.++.. ....||++|+ +++ +. +.|+... ..+.|++| |
T Consensus 285 --l~~~~~~~------------~~~~l~~~d~-----------------~~~~~~~~~~~l~~~~---~~~~~s~~~~~g 330 (751)
T 2xe4_A 285 --LCIGSQSP------------ETAEVHLLDL-----------------RKGNAHNTLEIVRPRE---KGVRYDVQMHGT 330 (751)
T ss_dssp --EEEEEECS------------SCEEEEEEES-----------------SSCTTCCCEEESSCCC---TTCCEEEEEETT
T ss_pred --EEEEecCC------------CCceEEEEEC-----------------CCCCCCceeEEeecCC---CCceEEEeeeeC
Confidence 99988532 2348999998 433 45 6676543 35667777 9
Q ss_pred CEEEEEeccCCCCCCCCcccceEEEEeCCCC-CCCC-cccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEE
Q 003363 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTN-GNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 461 (826)
Q Consensus 384 ~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~-~~~~-~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~ 461 (826)
++|+|.++++ + ....+|+++|+.+. ..+. +.....+ ..+. .|+.+++.|++.
T Consensus 331 ~~l~~~t~~~----~--a~~~~L~~~d~~~~~~~~~~li~~~~~------------------~~l~--~~~~~~~~lv~~ 384 (751)
T 2xe4_A 331 SHLVILTNEG----G--AVNHKLLIAPRGQPSDWSHVLVDHSED------------------VFME--SIAVRSNYLVVA 384 (751)
T ss_dssp TEEEEEECTT----T--CTTCEEEEEETTSTTCCCCEEECCCSS------------------EEEE--EEEECSSEEEEE
T ss_pred CEEEEEeCCC----C--CCCcEEEEEcCCCcccceeeEECCCCC------------------cEEE--EEEEECCEEEEE
Confidence 9999999874 1 23578999998752 2222 2111100 0011 244457789999
Q ss_pred EEeCCeEEEEEEEC-------CCCc-EEEecCCCCCeeeEEE------eecCCEEEEEEeCCCCCCeEEEEeecccCCCc
Q 003363 462 SIWGSSQVIISVNV-------SSGE-LLRITPAESNFSWSLL------TLDGDNIIAVSSSPVDVPQVKYGYFVDKANKG 527 (826)
Q Consensus 462 ~~~~~~~~l~~vdl-------~tg~-~~~lt~~~~~~~~~~~------s~dg~~l~~~~s~~~~p~~l~~~~~~~~~~~~ 527 (826)
...++...|+.+|+ ++++ .++|+....... ..+ +.+++.+++..+++.+|+++|.+++.+++ ..
T Consensus 385 ~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~-~~ 462 (751)
T 2xe4_A 385 GRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFT-VHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS-RT 462 (751)
T ss_dssp EEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCE-EEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC-EE
T ss_pred EEeCCEEEEEEEecccccccccCCccceEECCCCceeE-EEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc-EE
Confidence 99999999999996 6777 788864433222 234 45788999999999999999999976543 11
Q ss_pred eeeeeccCCCCCCCchhhhhcccccceeeeeecccCceeeeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC
Q 003363 528 TWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL 607 (826)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~ 607 (826)
.+ ... +.. ..+....+....+ .+...+|..++++++.|++.+..+++|+||++|||++....
T Consensus 463 ~l--~~~--~~~-------~~~~~~~~~~~~~-------~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~ 524 (751)
T 2xe4_A 463 AV--KVR--EVG-------GGFDAANYKVERR-------FATAPDQTKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMD 524 (751)
T ss_dssp EE--EEC--CCC-------TTCCGGGEEEEEE-------EEECTTCCEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCC
T ss_pred EE--ecc--ccc-------cCCCccceEEEEE-------EEECCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCC
Confidence 11 110 010 0011112222222 44556788999999999876566789999999999887655
Q ss_pred ccchHHHHHHHHCCcEEEEECCCCCCCCchhhhh-cCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHH
Q 003363 608 SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ-SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTT 686 (826)
Q Consensus 608 ~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~-~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~ 686 (826)
..|....+.|+++||+|+++|+||++++|..|.. .....++...++|+.+++++|++++.+|++||+|+|+|+||++++
T Consensus 525 ~~~~~~~~~l~~~G~~v~~~d~RG~g~~G~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~ 604 (751)
T 2xe4_A 525 PQFSIQHLPYCDRGMIFAIAHIRGGSELGRAWYEIGAKYLTKRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMG 604 (751)
T ss_dssp CCCCGGGHHHHTTTCEEEEECCTTSCTTCTHHHHTTSSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHH
T ss_pred CcchHHHHHHHhCCcEEEEEeeCCCCCcCcchhhccccccccCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHH
Confidence 5676677889999999999999999999999987 666666677899999999999999889999999999999999999
Q ss_pred HHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCc-EEEE
Q 003363 687 HLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTP-TIFL 765 (826)
Q Consensus 687 ~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P-vLii 765 (826)
.++.++|++|+++|+.+|+.++..+......+.+. ..+ ..+......+..+.+...+|+.++.++++| +||+
T Consensus 605 ~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~--~~~-----~~~g~p~~~~~~~~~~~~sp~~~~~~~~~Pp~Lii 677 (751)
T 2xe4_A 605 AVLNMRPDLFKVALAGVPFVDVMTTMCDPSIPLTT--GEW-----EEWGNPNEYKYYDYMLSYSPMDNVRAQEYPNIMVQ 677 (751)
T ss_dssp HHHHHCGGGCSEEEEESCCCCHHHHHTCTTSTTHH--HHT-----TTTCCTTSHHHHHHHHHHCTGGGCCSSCCCEEEEE
T ss_pred HHHHhCchheeEEEEeCCcchHHhhhcccCcccch--hhH-----HHcCCCCCHHHHHHHHhcChhhhhccCCCCceeEE
Confidence 99999999999999999999987654332222111 011 011111123444567788999999999997 9999
Q ss_pred EeCCCCCCCcHHHHHHHHHHHhCC---CCEEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHHHcC
Q 003363 766 LGAQDLRVPVSNGLQYARALREKG---VETKVIVFPNDVHGIERPQ-SDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 766 ~G~~D~~vp~~~~~~~~~~l~~~g---~~~~~~~~p~~~H~~~~~~-~~~~~~~~i~~w~~~~l~ 826 (826)
||++|.+||+.++.+++++|+..+ ..+.+.++++++|++.... ...+.+..+.+||.++|+
T Consensus 678 ~G~~D~~vp~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~ 742 (751)
T 2xe4_A 678 CGLHDPRVAYWEPAKWVSKLRECKTDNNEILLNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLK 742 (751)
T ss_dssp EETTCSSSCTHHHHHHHHHHHHHCCSCCCEEEEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred eeCCCCCCCHHHHHHHHHHHHhcCCCCceEEEEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999885 4566777899999987543 344566789999999874
No 13
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=3.2e-38 Score=366.97 Aligned_cols=480 Identities=14% Similarity=0.139 Sum_probs=328.7
Q ss_pred ceEEEEEccCCc--eEec-cCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchh
Q 003363 273 PSLFVININSGE--VQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 349 (826)
Q Consensus 273 ~~l~v~d~~~g~--~~~l-~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 349 (826)
..+|.+.+.+.. -+.+ .+...+.. -.+.-++|++.....+ +.+...+ ...+.+|.++++.
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~-~i~~~~~----------~~~~~~~~~~~~~----- 278 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIY-VSAGKLLSDTISSSLI-FISANKD----------FYNYDNYILDTKY----- 278 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCE-EEEEESSCTTTCSSEE-EEEEESS----------SSCEEEEEEECSS-----
T ss_pred CEEEEEECCCChHHCeEEeccCCCceE-EEEEEecCCCceEEEE-EEEEecc----------cCceeEEEEcCCC-----
Confidence 568888876643 2222 12222332 2345677877510012 3321111 1234789888621
Q ss_pred hhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeee
Q 003363 350 SELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 429 (826)
Q Consensus 350 ~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 429 (826)
..++..+|..... ..+..+.+|+.++++..+... .|......+|..+|+++...-.. .......+
T Consensus 279 ----------~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~ 343 (711)
T 4hvt_A 279 ----------KNLKLQKINMPSD--ATLQGSFKEYVFWLLRSDWKF-KSHNIKAGSLVALHFTDLLKTES--DKTSLKIL 343 (711)
T ss_dssp ----------SSCEEEECCSCTT--CEEEEEETTEEEEECSSCEEE-TTEEECTTCEEEEEGGGGGSCGG--GCTTCEEE
T ss_pred ----------CCCcceEeecCCc--ceEeeeECCEEEEEECccccc-ccccCCCCeEEEEECCccccccc--ccccceEE
Confidence 2355566643332 234567777655544332110 01112346799999876321000 00001111
Q ss_pred eeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCc--EEE-ecCC-CCCeeeEEEeecCCEEEEE
Q 003363 430 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE--LLR-ITPA-ESNFSWSLLTLDGDNIIAV 505 (826)
Q Consensus 430 ~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~--~~~-lt~~-~~~~~~~~~s~dg~~l~~~ 505 (826)
+... ....+..+.|..| .|++....++...|+.+|+.+|+ .+. +... .+.+.....+++++.+++.
T Consensus 344 ~~~~--------~~~~l~~~~~~~~--~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~ 413 (711)
T 4hvt_A 344 FTPT--------ANEVFNFISTTKD--RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALIT 413 (711)
T ss_dssp ECCC--------TTEEEEEEEECSS--CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEE
T ss_pred ECCC--------CCCeEEEEEEECC--EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEE
Confidence 1000 0112335667765 58888888999999999987774 445 4333 3444444556788899999
Q ss_pred EeCCCCCCeEEEEeecccCCCceeeeeccCCCCCCCchhhhhcccccceeeeeecccCceeeeccCCCeeEEEEEEecCC
Q 003363 506 SSSPVDVPQVKYGYFVDKANKGTWSWLNVSSPISRCPEKVKSLLSSRQFSIMKIPVKGVSANLTKGAQKPFEAIFVSSSH 585 (826)
Q Consensus 506 ~s~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~P~~ 585 (826)
.+++.+|++++.+++. ++ ... +...+. .+....+....+ .+...+|.+++++++.|++
T Consensus 414 ~ss~~~P~~~~~~d~~-~~-~~~---------l~~~~~----~~~~~~~~~e~v-------~~~s~DG~~i~~~l~~P~~ 471 (711)
T 4hvt_A 414 IENSIVPPTIYLWVKT-HE-LKI---------IRKALY----SFDSENYVLEQK-------EATSFDGVKIPYFLVYKKG 471 (711)
T ss_dssp EECSSSCCEEEEECTT-SC-EEE---------EECCSS----CCCGGGEEEEEE-------EEECTTSCEEEEEEEEETT
T ss_pred EecCCCCCEEEEEeCC-Cc-EEE---------EecCCc----ccCcccCeeEEE-------EEECCCCeEEEEEEEecCC
Confidence 9999999999999875 32 111 111111 111222222222 4556688999999999998
Q ss_pred CCCCCCCcEEEEEcCCCCCCCCccchHHH-HHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHH
Q 003363 586 KKDCSCDPLIVVLHGGPHSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVID 664 (826)
Q Consensus 586 ~~~~~~~P~vv~~HGg~~~~~~~~~~~~~-~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~ 664 (826)
.+..+++|+||++|||++......|.... +.|+++||+|+++|+||++++|..+.......++...++|+.+++++|++
T Consensus 472 ~~~~~~~P~vl~~HGG~~~~~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~ 551 (711)
T 4hvt_A 472 IKFDGKNPTLLEAYGGFQVINAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIK 551 (711)
T ss_dssp CCCSSCCCEEEECCCCTTCCCCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHH
T ss_pred CCCCCCccEEEEECCCCCCCCCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHH
Confidence 76678999999999998877666776655 58899999999999999999999999888888888889999999999999
Q ss_pred cCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHH
Q 003363 665 MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT 744 (826)
Q Consensus 665 ~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (826)
++.+|++||+|+|+|+||+++++++.++|++|+++|+.+|++++..+........|. ..++. ....+..+
T Consensus 552 ~~~~d~~rI~i~G~S~GG~la~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~~--~~~G~--------p~~~~~~~ 621 (711)
T 4hvt_A 552 QNITSPEYLGIKGGSNGGLLVSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSWV--TEYGD--------PEIPNDLL 621 (711)
T ss_dssp TTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGH--HHHCC--------TTSHHHHH
T ss_pred cCCCCcccEEEEeECHHHHHHHHHHHhCcCceEEEEEeCCccchhhhhccccchHHH--HHhCC--------CcCHHHHH
Confidence 999999999999999999999999999999999999999999987654432222221 22222 12235567
Q ss_pred HHhhcCcccccCCCCC--cEEEEEeCCCCCCCcHHHHHHHHHH-HhCCCCEEEEEeCCCCCCCCCCC-CHHHHHHHHHHH
Q 003363 745 RFHSKSPISHISKVKT--PTIFLLGAQDLRVPVSNGLQYARAL-REKGVETKVIVFPNDVHGIERPQ-SDFESFLNIGLW 820 (826)
Q Consensus 745 ~~~~~sp~~~~~~i~~--PvLii~G~~D~~vp~~~~~~~~~~l-~~~g~~~~~~~~p~~~H~~~~~~-~~~~~~~~i~~w 820 (826)
.+...+|+.++.++++ |+||+||++|.+||+.++.+++++| +..|++++++++|+++|++.... ...+.+..+.+|
T Consensus 622 ~l~~~SP~~~v~~i~~~pPvLii~G~~D~~Vp~~~s~~~~~aL~~~~g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~F 701 (711)
T 4hvt_A 622 HIKKYAPLENLSLTQKYPTVLITDSVLDQRVHPWHGRIFEYVLAQNPNTKTYFLESKDSGHGSGSDLKESANYFINLYTF 701 (711)
T ss_dssp HHHHHCGGGSCCTTSCCCEEEEEEETTCCSSCTHHHHHHHHHHTTCTTCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHHcCHHHHHhhcCCCCCEEEEecCCCCcCChHHHHHHHHHHHHHcCCCEEEEEECCCCCcCcCCcchHHHHHHHHHHH
Confidence 7888999999999886 9999999999999999999999999 99999999999999999986543 344667788999
Q ss_pred HHHHcC
Q 003363 821 FKKYCK 826 (826)
Q Consensus 821 ~~~~l~ 826 (826)
|.++|+
T Consensus 702 L~~~Lg 707 (711)
T 4hvt_A 702 FANALK 707 (711)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 999875
No 14
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.92 E-value=9.8e-24 Score=218.07 Aligned_cols=209 Identities=17% Similarity=0.176 Sum_probs=145.6
Q ss_pred ccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCC
Q 003363 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (826)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~ 648 (826)
.+.||.+|.|+++.|. ..++.|+||++||++.......+...++.|+++||+|+++|+||++.++............
T Consensus 36 ~~~dG~~i~g~l~~P~---~~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~rG~G~s~~~~~~~~~~~~~ 112 (259)
T 4ao6_A 36 LEVDGRTVPGVYWSPA---EGSSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGPGHGERASVQAGREPTDVV 112 (259)
T ss_dssp EEETTEEEEEEEEEES---SSCCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCCC-------------CCGG
T ss_pred EeeCCeEEEEEEEeCC---CCCCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccCCCCCCCCcccccccchhh
Confidence 4568999999999998 4567899999999887654556777889999999999999999976654332211111111
Q ss_pred ---------------cchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhcc
Q 003363 649 ---------------SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG 713 (826)
Q Consensus 649 ---------------~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~ 713 (826)
...+.|..++++++... +|+++|+++|+|+||++++.+++..|+ ++++|+..+....
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~~~~----- 184 (259)
T 4ao6_A 113 GLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMGVEG----- 184 (259)
T ss_dssp GSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCCTTS-----
T ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEecccccc-----
Confidence 11245777788887665 688999999999999999999998774 6666654332110
Q ss_pred CCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEE
Q 003363 714 TTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 793 (826)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 793 (826)
... .++...+.+|++|+|++||++|.+||+++++++++++.. .+.+
T Consensus 185 ------------------------~~~--------~~~~~~a~~i~~P~Li~hG~~D~~vp~~~~~~l~~al~~--~~k~ 230 (259)
T 4ao6_A 185 ------------------------VNG--------EDLVRLAPQVTCPVRYLLQWDDELVSLQSGLELFGKLGT--KQKT 230 (259)
T ss_dssp ------------------------TTH--------HHHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCC--SSEE
T ss_pred ------------------------ccc--------cchhhhhccCCCCEEEEecCCCCCCCHHHHHHHHHHhCC--CCeE
Confidence 000 123345678999999999999999999999999999854 4578
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 794 VIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 794 ~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
++++|+..|.+ ...+.+..+++||++|||
T Consensus 231 l~~~~G~H~~~----p~~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 231 LHVNPGKHSAV----PTWEMFAGTVDYLDQRLK 259 (259)
T ss_dssp EEEESSCTTCC----CHHHHTHHHHHHHHHHCC
T ss_pred EEEeCCCCCCc----CHHHHHHHHHHHHHHhcC
Confidence 88998854433 345778999999999997
No 15
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=2.3e-22 Score=223.15 Aligned_cols=268 Identities=16% Similarity=0.184 Sum_probs=199.2
Q ss_pred CCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEe
Q 003363 106 GNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW 185 (826)
Q Consensus 106 ~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~ 185 (826)
+.+.+++|...... +.....|++++++ +...+.++... ..+..++|||||++|||++..+ +...++..+
T Consensus 141 ~~~~~l~~~s~~~~---~~~~~~i~i~d~~--g~~~~~l~~~~-----~~v~~~~~Spdg~~la~~s~~~-~~~~i~~~d 209 (415)
T 2hqs_A 141 AFRTRIAYVVQTNG---GQFPYELRVSDYD--GYNQFVVHRSP-----QPLMSPAWSPDGSKLAYVTFES-GRSALVIQT 209 (415)
T ss_dssp CTTCEEEEEEECSS---SSCCEEEEEEETT--SCSCEEEEEES-----SCEEEEEECTTSSEEEEEECTT-SSCEEEEEE
T ss_pred cCCCEEEEEEecCC---CCccceEEEEcCC--CCCCEEEeCCC-----CcceeeEEcCCCCEEEEEEecC-CCcEEEEEE
Confidence 44677888765421 2233788888864 44556666554 4688999999999999998653 344565555
Q ss_pred -cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCC
Q 003363 186 -SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWG 264 (826)
Q Consensus 186 -~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g 264 (826)
.+++.+++....... ..++|||||++|+|.+...
T Consensus 210 ~~tg~~~~l~~~~~~~----------~~~~~spdg~~la~~~~~~----------------------------------- 244 (415)
T 2hqs_A 210 LANGAVRQVASFPRHN----------GAPAFSPDGSKLAFALSKT----------------------------------- 244 (415)
T ss_dssp TTTCCEEEEECCSSCE----------EEEEECTTSSEEEEEECTT-----------------------------------
T ss_pred CCCCcEEEeecCCCcc----------cCEEEcCCCCEEEEEEecC-----------------------------------
Confidence 455555554433222 7899999999999986532
Q ss_pred ccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEccc
Q 003363 265 ETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 344 (826)
Q Consensus 265 ~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 344 (826)
+...||+||+.+++.+.+ ......+..++|||||+. |+|.+... ....||.+|+
T Consensus 245 ------g~~~i~~~d~~~~~~~~l--~~~~~~~~~~~~spdg~~----l~~~s~~~------------g~~~i~~~d~-- 298 (415)
T 2hqs_A 245 ------GSLNLYVMDLASGQIRQV--TDGRSNNTEPTWFPDSQN----LAFTSDQA------------GRPQVYKVNI-- 298 (415)
T ss_dssp ------SSCEEEEEETTTCCEEEC--CCCSSCEEEEEECTTSSE----EEEEECTT------------SSCEEEEEET--
T ss_pred ------CCceEEEEECCCCCEEeC--cCCCCcccceEECCCCCE----EEEEECCC------------CCcEEEEEEC--
Confidence 346899999999999888 444556778999999999 99988422 2237999998
Q ss_pred ccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCccccee
Q 003363 345 YKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV 424 (826)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 424 (826)
.+++.++++.+...+..+.|||||++|++.+.+. +...|++||+.+++.+.++...
T Consensus 299 ---------------~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~--------g~~~i~~~d~~~~~~~~l~~~~- 354 (415)
T 2hqs_A 299 ---------------NGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG--------GQQHIAKQDLATGGVQVLSSTF- 354 (415)
T ss_dssp ---------------TSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS--------SCEEEEEEETTTCCEEECCCSS-
T ss_pred ---------------CCCCEEEEecCCCcccCeEECCCCCEEEEEECcC--------CceEEEEEECCCCCEEEecCCC-
Confidence 7777888887766778899999999999998763 2468999999886654333211
Q ss_pred eeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecC
Q 003363 425 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDG 499 (826)
Q Consensus 425 ~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg 499 (826)
....+.|+|||+.|++.+...+...||.+|++++..++|+...+.+....|+|..
T Consensus 355 --------------------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 355 --------------------LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp --------------------SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCC
T ss_pred --------------------CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCcccccc
Confidence 2336789999999999988888889999999999999998877777777888754
No 16
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.91 E-value=1.6e-23 Score=218.81 Aligned_cols=231 Identities=17% Similarity=0.197 Sum_probs=171.8
Q ss_pred eccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCC
Q 003363 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 646 (826)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~ 646 (826)
+...+|..+.+++..|......++.|+||++|||++.. ....+...+..|+++||.|+++|+||.+.... ..
T Consensus 19 ~~~~~g~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~-------~~ 91 (276)
T 3hxk_A 19 FSLNDTAWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTN-------YN 91 (276)
T ss_dssp CCCBTTBEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCC-------SC
T ss_pred ccCCCCeEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCC-------CC
Confidence 34456777877666654322347889999999977443 23456778889999999999999999654210 01
Q ss_pred CCcchHHHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHh-CCCceeEEEecCCccchhhhccCCCCCCchh
Q 003363 647 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMVGTTDIPDWCY 722 (826)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~ 722 (826)
.......|+.++++++.+.. .+|+++|+|+|||+||.+++.++.+ .+++++++|+.+|+.++........ .
T Consensus 92 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~~~--~--- 166 (276)
T 3hxk_A 92 FLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSDL--S--- 166 (276)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSSSS--S---
T ss_pred cCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCcch--h---
Confidence 11245789999999998864 3788999999999999999999987 7889999999999887543311110 0
Q ss_pred hhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCC
Q 003363 723 VESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVH 802 (826)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H 802 (826)
...+. + +. . ...++...+.++.+|+|++||++|..+|++++..+++++++.+.+++++++++++|
T Consensus 167 --------~~~~~--~--~~--~-~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~~H 231 (276)
T 3hxk_A 167 --------HFNFE--I--EN--I-SEYNISEKVTSSTPPTFIWHTADDEGVPIYNSLKYCDRLSKHQVPFEAHFFESGPH 231 (276)
T ss_dssp --------SSCCC--C--SC--C-GGGBTTTTCCTTSCCEEEEEETTCSSSCTHHHHHHHHHHHTTTCCEEEEEESCCCT
T ss_pred --------hhhcC--c--hh--h-hhCChhhccccCCCCEEEEecCCCceeChHHHHHHHHHHHHcCCCeEEEEECCCCC
Confidence 01111 1 11 1 44567777888899999999999999999999999999999999999999999999
Q ss_pred CCCCCCC------------HHHHHHHHHHHHHHHc
Q 003363 803 GIERPQS------------DFESFLNIGLWFKKYC 825 (826)
Q Consensus 803 ~~~~~~~------------~~~~~~~i~~w~~~~l 825 (826)
.+..... ..++...+.+||+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 266 (276)
T 3hxk_A 232 GVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQI 266 (276)
T ss_dssp TCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHH
T ss_pred CccccCccccccccccCchHHHHHHHHHHHHHhCc
Confidence 8875333 3568888999999875
No 17
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.91 E-value=4e-23 Score=227.05 Aligned_cols=322 Identities=14% Similarity=0.142 Sum_probs=211.1
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003363 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (826)
Q Consensus 102 ~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (826)
|.+||||++|+|..... ....||++++ .+++.++++...- .....+.|||||++|+|.+... .+
T Consensus 41 ~~~SpDg~~l~~~~~~~------g~~~l~~~d~--~~g~~~~lt~~~~----~~~~~~~~spdg~~l~~~~~~~----~l 104 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFD------GPWNYYLLDL--NTQVATQLTEGRG----DNTFGGFLSPDDDALFYVKDGR----NL 104 (388)
T ss_dssp CCBCTTSCEEEEEECTT------SSCEEEEEET--TTCEEEECCCSSC----BCSSSCEECTTSSEEEEEETTT----EE
T ss_pred ccCCCCCCEEEEEEcCC------CCceEEEEeC--CCCceEEeeeCCC----CCccceEEcCCCCEEEEEeCCC----eE
Confidence 77899999999986521 2457888775 4456677765441 1233678999999999998642 56
Q ss_pred EEEe-cCCceeEEEecCCCccccccCCCcccce--eecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcce
Q 003363 182 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGI--SWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 258 (826)
Q Consensus 182 ~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~--~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (826)
+.++ .+++.+.++..+... .... .++|||+.|+..........+. ..|..
T Consensus 105 ~~~d~~~g~~~~~~~~~~~~---------~~~~~~~~~~dg~~l~~~~~~~~~~~~~---------------~~~~~--- 157 (388)
T 3pe7_A 105 MRVDLATLEENVVYQVPAEW---------VGYGTWVANSDCTKLVGIEIRREDWVPL---------------TDWKK--- 157 (388)
T ss_dssp EEEETTTCCEEEEEECCTTE---------EEEEEEEECTTSSEEEEEEEEGGGCCCC---------------CSHHH---
T ss_pred EEEECCCCcceeeeechhhc---------ccccceeECCCCCeeccccccCcccccc---------------cccch---
Confidence 7666 566666666554332 1223 3599999998765432110000 00000
Q ss_pred eecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEee-CCCCCccEEEEEeecCcceeeeeeeeccCCCce
Q 003363 259 WEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 337 (826)
Q Consensus 259 ~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSP-Dg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l 337 (826)
|. +.+.......|+++|+++|+.+.+ +.....+..+.||| ||+. |+|...... ......|
T Consensus 158 ~~----~~~~~~~~~~l~~~d~~~g~~~~l--~~~~~~~~~~~~sp~dg~~----l~~~~~~~~---------~~~~~~l 218 (388)
T 3pe7_A 158 FH----EFYFTKPCCRLMRVDLKTGESTVI--LQENQWLGHPIYRPYDDST----VAFCHEGPH---------DLVDARM 218 (388)
T ss_dssp HH----HHGGGCCCEEEEEEETTTCCEEEE--EEESSCEEEEEEETTEEEE----EEEEECSCT---------TTSSCSE
T ss_pred hh----hhhccCCcceEEEEECCCCceEEe--ecCCccccccEECCCCCCE----EEEEEecCC---------CCCcceE
Confidence 00 011122347899999999999888 44444567899999 9999 999874211 0124589
Q ss_pred EEEEcccccchhhhhhhhcCCCCCCcceecCCCCc--cccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCC
Q 003363 338 YAVRVSLYKSEASELELKESSSEDLPVVNLTESIS--SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 338 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~--~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
|.+|+ +++..++|+.... .+..|.|||||++|+|.+.+.. .....|+++|+.+++
T Consensus 219 ~~~d~-----------------~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 219 WLINE-----------------DGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKG------SPDRFIYSADPETLE 275 (388)
T ss_dssp EEEET-----------------TSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETT------CCCEEEEEECTTTCC
T ss_pred EEEeC-----------------CCCceEEeeeCCCCcccccceECCCCCEEEEEecCCC------CCcceEEEEecCCCc
Confidence 99998 7778888887652 4678999999999999987641 112359999999877
Q ss_pred CCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEe------CCeEEEEEEECCCCcEEEecCCCC-
Q 003363 416 NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW------GSSQVIISVNVSSGELLRITPAES- 488 (826)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~------~~~~~l~~vdl~tg~~~~lt~~~~- 488 (826)
.+.++.... ... +........|+|||+.|++.... .+...||++|+++++.++|+....
T Consensus 276 ~~~l~~~~~-~~~-------------~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~ 341 (388)
T 3pe7_A 276 NRQLTSMPA-CSH-------------LMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTS 341 (388)
T ss_dssp EEEEEEECC-EEE-------------EEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCC
T ss_pred eEEEEcCCC-cee-------------eeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCc
Confidence 544332111 000 00112345799999999887644 567789999999999999987654
Q ss_pred ----------CeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 489 ----------NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 489 ----------~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
......|++||+.|++.+.. ...++||++++...
T Consensus 342 ~~~~~~~~~~~~~~~~~spDg~~l~~~s~~-~g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 342 WKVFEGDRQVTHPHPSFTPDDKQILFTSDV-HGKPALYLATLPES 385 (388)
T ss_dssp CCCBTTBSSTTCCCCEECTTSSEEEEEECT-TSSCEEEEEECCGG
T ss_pred ccccccccccCCCCccCCCCCCEEEEEecC-CCceeEEEEECChh
Confidence 34556899999998888755 45567999887643
No 18
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.90 E-value=2.1e-23 Score=212.84 Aligned_cols=214 Identities=17% Similarity=0.216 Sum_probs=163.3
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhh-------cCC
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ-------SLP 644 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~-------~~~ 644 (826)
+|..+.++++.|++ ..++.|+||++||..+. ...+...++.|+++||.|+++|++|.++....... ...
T Consensus 14 ~~~~~~~~~~~p~~--~~~~~p~vv~~HG~~g~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~ 89 (241)
T 3f67_A 14 QGENMPAYHARPKN--ADGPLPIVIVVQEIFGV--HEHIRDLCRRLAQEGYLAIAPELYFRQGDPNEYHDIPTLFKELVS 89 (241)
T ss_dssp TTEEEEEEEEEETT--CCSCEEEEEEECCTTCS--CHHHHHHHHHHHHTTCEEEEECTTTTTCCGGGCCSHHHHHHHTGG
T ss_pred CCcceEEEEecCCC--CCCCCCEEEEEcCcCcc--CHHHHHHHHHHHHCCcEEEEecccccCCCCCchhhHHHHHHHhhh
Confidence 67889999999984 34678999999996544 34677788899999999999999996554332210 000
Q ss_pred CCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhh
Q 003363 645 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 724 (826)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~ 724 (826)
........+|+.++++++.+++ +|.++|+|+|||+||.+++.++.++|+ ++++++..+..... .
T Consensus 90 ~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~-------~------- 153 (241)
T 3f67_A 90 KVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGE-------K------- 153 (241)
T ss_dssp GSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCC-------C-------
T ss_pred cCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCC-------C-------
Confidence 0111234789999999999887 788999999999999999999999887 66666655432100 0
Q ss_pred hccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCC
Q 003363 725 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 804 (826)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~ 804 (826)
..+...+|...+.++++|+|+++|++|..+|++++..+++.+++.+.+++++++++++|.+
T Consensus 154 -------------------~~~~~~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~~ 214 (241)
T 3f67_A 154 -------------------SLNSPKHPVDIAVDLNAPVLGLYGAKDASIPQDTVETMRQALRAANATAEIVVYPEADHAF 214 (241)
T ss_dssp -------------------CSSSCCCHHHHGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHHHTTCSEEEEEETTCCTTT
T ss_pred -------------------ccCCccCHHHhhhhcCCCEEEEEecCCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCcce
Confidence 0011234555667789999999999999999999999999999999999999999999998
Q ss_pred CCC-------CCHHHHHHHHHHHHHHH
Q 003363 805 ERP-------QSDFESFLNIGLWFKKY 824 (826)
Q Consensus 805 ~~~-------~~~~~~~~~i~~w~~~~ 824 (826)
... ....+.+..+++||++|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~fl~~~ 241 (241)
T 3f67_A 215 NADYRASYHEESAKDGWQRMLAWFAQY 241 (241)
T ss_dssp TCTTSTTCCHHHHHHHHHHHHHHHTTC
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHHhhC
Confidence 632 22356788999999875
No 19
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.90 E-value=6.7e-23 Score=210.93 Aligned_cols=240 Identities=13% Similarity=0.156 Sum_probs=162.3
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCC-cc
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG-SQ 650 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~-~~ 650 (826)
+|..++++++.|++ ..++.|+||++||.+.......|...+..|+++||.|+++|+||.+.+.... ..+. ..
T Consensus 9 ~g~~l~~~~~~p~~--~~~~~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-----~~~~~~~ 81 (251)
T 2wtm_A 9 DGIKLNAYLDMPKN--NPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYGHGKSDGKF-----EDHTLFK 81 (251)
T ss_dssp TTEEEEEEEECCTT--CCSSEEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCG-----GGCCHHH
T ss_pred CCcEEEEEEEccCC--CCCCCCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCCCCCCCCCcc-----ccCCHHH
Confidence 67889999998864 2356799999999765533456777888999999999999999955432211 0111 12
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcC
Q 003363 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 730 (826)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (826)
..+|+.++++++.+...+ +++.|+||||||.+++.++.++|++++++|+.+|.................+........
T Consensus 82 ~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T 2wtm_A 82 WLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDE 159 (251)
T ss_dssp HHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECBTTBCCSE
T ss_pred HHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCCchhcchH
Confidence 367888888888665333 589999999999999999999999999999999875432110000000000000000000
Q ss_pred CccCCCCC-ChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCC
Q 003363 731 KDSFTESP-SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 809 (826)
Q Consensus 731 ~~~~~~~~-~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~ 809 (826)
...+.... ...........++...+.++++|+|++||++|..+|++.+.++++.+. +++++++++++|.+ .+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~v~~~~~~~~~~~~~----~~~~~~~~~~gH~~--~~~ 233 (251)
T 2wtm_A 160 LDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYK----NCKLVTIPGDTHCY--DHH 233 (251)
T ss_dssp EEETTTEEEETHHHHHHTTCCHHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHSS----SEEEEEETTCCTTC--TTT
T ss_pred HhhhhccccchHHHHHHHccCHHHHHHhcCCCEEEEEeCCCCCcChHHHHHHHHhCC----CcEEEEECCCCccc--chh
Confidence 00000000 011122222334445567789999999999999999999998887764 48999999999998 555
Q ss_pred HHHHHHHHHHHHHHHcC
Q 003363 810 DFESFLNIGLWFKKYCK 826 (826)
Q Consensus 810 ~~~~~~~i~~w~~~~l~ 826 (826)
..++.+.+.+||+++++
T Consensus 234 ~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 234 LELVTEAVKEFMLEQIA 250 (251)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 66899999999998864
No 20
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.90 E-value=2.4e-22 Score=209.94 Aligned_cols=225 Identities=19% Similarity=0.218 Sum_probs=163.3
Q ss_pred CCCeeEEEEEEecCC---CCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCC
Q 003363 571 GAQKPFEAIFVSSSH---KKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 646 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~---~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~ 646 (826)
.++..+.+.+|.|+. +...++.|+||++|||++.. ....+...+..|+++||.|+++||||.+..+ .
T Consensus 11 ~~~~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~--------~- 81 (277)
T 3bxp_A 11 TAAHPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQ--------S- 81 (277)
T ss_dssp STTCCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTC--------C-
T ss_pred cCCCcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCC--------c-
Confidence 355678888898873 23457889999999976433 2346677888999999999999999944211 1
Q ss_pred CCcchHHHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHhC--------------CCceeEEEecCCccchh
Q 003363 647 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--------------PDKFVAAAARNPLCNLA 709 (826)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~~--------------p~~~~a~v~~~p~~~~~ 709 (826)
.......|+.++++++.+.. .+|+++|+|+|||+||.+++.++.++ +.+++++|+.+|+.++.
T Consensus 82 ~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~ 161 (277)
T 3bxp_A 82 VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAIILGYPVIDLT 161 (277)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEEEEESCCCBTT
T ss_pred cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEEEEeCCcccCC
Confidence 12245789999999988762 36778999999999999999999885 67899999999987643
Q ss_pred hhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCC
Q 003363 710 LMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 789 (826)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g 789 (826)
...... ..+...+ . ......+|...+.++.+|+|++||++|..+|++++.++++++++.+
T Consensus 162 ~~~~~~----~~~~~~~--------~--------~~~~~~~~~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~ 221 (277)
T 3bxp_A 162 AGFPTT----SAARNQI--------T--------TDARLWAAQRLVTPASKPAFVWQTATDESVPPINSLKYVQAMLQHQ 221 (277)
T ss_dssp SSSSSS----HHHHHHH--------C--------SCGGGSBGGGGCCTTSCCEEEEECTTCCCSCTHHHHHHHHHHHHTT
T ss_pred CCCCCc----cccchhc--------c--------chhhhcCHhhccccCCCCEEEEeeCCCCccChHHHHHHHHHHHHCC
Confidence 210000 0000000 0 0123456777777888999999999999999999999999999999
Q ss_pred CCEEEEEeCCCCCCCCCCCC--------------HHHHHHHHHHHHHHH
Q 003363 790 VETKVIVFPNDVHGIERPQS--------------DFESFLNIGLWFKKY 824 (826)
Q Consensus 790 ~~~~~~~~p~~~H~~~~~~~--------------~~~~~~~i~~w~~~~ 824 (826)
.+++++++++++|.+..... ..++++.+.+||+++
T Consensus 222 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 270 (277)
T 3bxp_A 222 VATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQ 270 (277)
T ss_dssp CCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhc
Confidence 99999999999997754332 357888999999876
No 21
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.89 E-value=2.8e-22 Score=220.34 Aligned_cols=229 Identities=14% Similarity=0.097 Sum_probs=169.3
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..+.++++.|++ .++.|+||++||++... ..+....+.|+++||.|+++|+||. |.+.. ........
T Consensus 135 dg~~i~~~l~~p~~---~~~~P~vl~~hG~~~~~--~~~~~~~~~l~~~G~~v~~~d~rG~---G~s~~---~~~~~~~~ 203 (386)
T 2jbw_A 135 DGIPMPVYVRIPEG---PGPHPAVIMLGGLESTK--EESFQMENLVLDRGMATATFDGPGQ---GEMFE---YKRIAGDY 203 (386)
T ss_dssp TTEEEEEEEECCSS---SCCEEEEEEECCSSCCT--TTTHHHHHHHHHTTCEEEEECCTTS---GGGTT---TCCSCSCH
T ss_pred CCEEEEEEEEcCCC---CCCCCEEEEeCCCCccH--HHHHHHHHHHHhCCCEEEEECCCCC---CCCCC---CCCCCccH
Confidence 68899999999984 36789999999876542 2333447888999999999999994 44311 11112223
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCC
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 731 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (826)
.+++.++++++.+++.+|.++|+|+|||+||++++.++.+ |++|+++|+. |+.++...... .+.. ..... .
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~--~~~~-~~~~~----~ 274 (386)
T 2jbw_A 204 EKYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDL--ETPL-TKESW----K 274 (386)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGG--SCHH-HHHHH----H
T ss_pred HHHHHHHHHHHHhCCCcCcccEEEEEEChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHh--ccHH-HHHHH----H
Confidence 4568899999999887889999999999999999999998 8999999999 98876443221 0000 00000 0
Q ss_pred ccCCCCCChhhH-HHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHH-HhCCCCEEEEEeCCCCCCCCCCCC
Q 003363 732 DSFTESPSVEDL-TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL-REKGVETKVIVFPNDVHGIERPQS 809 (826)
Q Consensus 732 ~~~~~~~~~~~~-~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l-~~~g~~~~~~~~p~~~H~~~~~~~ 809 (826)
..+......+.. ..+...++...+.++++|+|+++|++|. +|+.++.++++++ +. +++++++++++|.+ ...
T Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~---~~~~~~~~~~gH~~--~~~ 348 (386)
T 2jbw_A 275 YVSKVDTLEEARLHVHAALETRDVLSQIACPTYILHGVHDE-VPLSFVDTVLELVPAE---HLNLVVEKDGDHCC--HNL 348 (386)
T ss_dssp HHTTCSSHHHHHHHHHHHTCCTTTGGGCCSCEEEEEETTSS-SCTHHHHHHHHHSCGG---GEEEEEETTCCGGG--GGG
T ss_pred HHhCCCCHHHHHHHHHHhCChhhhhcccCCCEEEEECCCCC-CCHHHHHHHHHHhcCC---CcEEEEeCCCCcCC--ccc
Confidence 001111112333 5566778888889999999999999999 9999999999998 64 58999999999976 334
Q ss_pred HHHHHHHHHHHHHHHcC
Q 003363 810 DFESFLNIGLWFKKYCK 826 (826)
Q Consensus 810 ~~~~~~~i~~w~~~~l~ 826 (826)
..+++..+.+||+++|+
T Consensus 349 ~~~~~~~i~~fl~~~l~ 365 (386)
T 2jbw_A 349 GIRPRLEMADWLYDVLV 365 (386)
T ss_dssp TTHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhcC
Confidence 45788999999999874
No 22
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.89 E-value=2e-22 Score=223.98 Aligned_cols=231 Identities=16% Similarity=0.172 Sum_probs=164.8
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHH
Q 003363 575 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 654 (826)
Q Consensus 575 ~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D 654 (826)
.+.+.++.|+ ..++.|+||++||++.. .+...+..|+++||.|+++|+||.++. +........+|
T Consensus 144 ~l~~~l~~P~---~~~~~P~Vv~~hG~~~~----~~~~~a~~La~~Gy~V~a~D~rG~g~~--------~~~~~~~~~~d 208 (422)
T 3k2i_A 144 RVRATLFLPP---GPGPFPGIIDIFGIGGG----LLEYRASLLAGHGFATLALAYYNFEDL--------PNNMDNISLEY 208 (422)
T ss_dssp TEEEEEEECS---SSCCBCEEEEECCTTCS----CCCHHHHHHHTTTCEEEEEECSSSTTS--------CSSCSCEETHH
T ss_pred cEEEEEEcCC---CCCCcCEEEEEcCCCcc----hhHHHHHHHHhCCCEEEEEccCCCCCC--------CCCcccCCHHH
Confidence 5889999997 35678999999997654 234457889999999999999995543 22333456899
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc---cCCCCCCchhh-h--hccC
Q 003363 655 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV---GTTDIPDWCYV-E--SYGS 728 (826)
Q Consensus 655 ~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~---~~~~~~~~~~~-~--~~~~ 728 (826)
+.++++++.++..+|.++|+|+|||+||.+++.++.++|+ ++++|+.+|........ .....+..... . ....
T Consensus 209 ~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (422)
T 3k2i_A 209 FEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAF 287 (422)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEECT
T ss_pred HHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccCc
Confidence 9999999999888889999999999999999999999998 99999988875321100 00000000000 0 0000
Q ss_pred cC---CccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHH-HHHHHHHHhCCCC-EEEEEeCCCCCC
Q 003363 729 KG---KDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVE-TKVIVFPNDVHG 803 (826)
Q Consensus 729 ~~---~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~-~~~~~~l~~~g~~-~~~~~~p~~~H~ 803 (826)
.. .......+. .....+....+.++++|+|++||++|..+|..+. +.+.++|++.+++ +++++||+++|.
T Consensus 288 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~i~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~~gagH~ 362 (422)
T 3k2i_A 288 SGLVDIVDIRNALV-----GGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGHY 362 (422)
T ss_dssp TSCEECTTCBCCCT-----TGGGSTTBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHHHHHHHTTCCCCEEEEETTCCSC
T ss_pred chhHHHHHHHhhhh-----hcccccccccHHHCCCCEEEEEeCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEECCCCCE
Confidence 00 000001110 0112233345678899999999999999999866 6899999999988 999999999999
Q ss_pred CCCC---------------------------CCHHHHHHHHHHHHHHHcC
Q 003363 804 IERP---------------------------QSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 804 ~~~~---------------------------~~~~~~~~~i~~w~~~~l~ 826 (826)
+..+ +...+.++.+++||++||+
T Consensus 363 ~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~ 412 (422)
T 3k2i_A 363 IEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLG 412 (422)
T ss_dssp CCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8322 3456789999999999984
No 23
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.89 E-value=3e-22 Score=219.44 Aligned_cols=216 Identities=16% Similarity=0.160 Sum_probs=170.3
Q ss_pred eeccC-CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH----------HHHHHHHCCcEEEEECCCCCCCC
Q 003363 567 NLTKG-AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK----------SLAFLSSVGYSLLIVNYRGSLGF 635 (826)
Q Consensus 567 ~~~~~-~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~----------~~~~la~~G~~Vl~~d~rG~~g~ 635 (826)
.+.+. +|..+.+++|.|+++++.+++|+||++||+++......... ...+....|+.|+++|++|.+++
T Consensus 148 ~~~~~~dg~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~~g~~~~ 227 (380)
T 3doh_A 148 TFKDPETGVEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSW 227 (380)
T ss_dssp EEECTTTCCEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECCCTTCCS
T ss_pred eeccCCCCcEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecCCCCCcc
Confidence 44555 78899999999998767888999999999875432211110 12234577899999999998888
Q ss_pred chhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCC
Q 003363 636 GEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT 715 (826)
Q Consensus 636 G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~ 715 (826)
+..+........+.....|+.+++++++++..+|++||+|+|||+||++++.++.++|++|+++++.+|..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~------- 300 (380)
T 3doh_A 228 STLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV------- 300 (380)
T ss_dssp BTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG-------
T ss_pred cccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh-------
Confidence 8776544444445667899999999999987789999999999999999999999999999999999986411
Q ss_pred CCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCC-CCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEE
Q 003363 716 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV-KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 794 (826)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 794 (826)
..+.++ .+|+|++||+.|..+|++++++++++|++.|.++++
T Consensus 301 -------------------------------------~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 343 (380)
T 3doh_A 301 -------------------------------------SKVERIKDIPIWVFHAEDDPVVPVENSRVLVKKLAEIGGKVRY 343 (380)
T ss_dssp -------------------------------------GGGGGGTTSCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEE
T ss_pred -------------------------------------hhhhhccCCCEEEEecCCCCccCHHHHHHHHHHHHHCCCceEE
Confidence 111223 389999999999999999999999999999999999
Q ss_pred EEeCCC---CCCCCCCCCHHHHHH--HHHHHHHHHcC
Q 003363 795 IVFPND---VHGIERPQSDFESFL--NIGLWFKKYCK 826 (826)
Q Consensus 795 ~~~p~~---~H~~~~~~~~~~~~~--~i~~w~~~~l~ 826 (826)
++||++ +|++.........+. .+++||.++.+
T Consensus 344 ~~~~~~~h~~h~~~~H~~~~~~~~~~~i~~wL~~~~r 380 (380)
T 3doh_A 344 TEYEKGFMEKHGWDPHGSWIPTYENQEAIEWLFEQSR 380 (380)
T ss_dssp EEECTTHHHHTTCCTTCTHHHHHTCHHHHHHHHTCC-
T ss_pred EEecCCcccCCCCCCchhHHHhcCCHHHHHHHHhhcC
Confidence 999999 555444445556666 89999988653
No 24
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.89 E-value=3.3e-22 Score=215.52 Aligned_cols=242 Identities=14% Similarity=0.181 Sum_probs=170.1
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhh-hhcCC-
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEA-LQSLP- 644 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~-~~~~~- 644 (826)
.+...+|..+.++++.|++. .++.|+||++||++.... +......|+++||.|+++|+||.++++... ....+
T Consensus 72 ~~~~~dg~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~~---~~~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~p~ 146 (337)
T 1vlq_A 72 TFSGYRGQRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRG---FPHDWLFWPSMGYICFVMDTRGQGSGWLKGDTPDYPE 146 (337)
T ss_dssp EEECGGGCEEEEEEEEECCS--CSSEEEEEECCCTTCCCC---CGGGGCHHHHTTCEEEEECCTTCCCSSSCCCCCBCCS
T ss_pred EEEcCCCCEEEEEEEecCCC--CCCccEEEEEcCCCCCCC---CchhhcchhhCCCEEEEecCCCCCCcccCCCCccccc
Confidence 34445678999999999842 567899999999776532 223445778899999999999977543210 00000
Q ss_pred ----CCCC---------------cchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCc
Q 003363 645 ----GKVG---------------SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (826)
Q Consensus 645 ----~~~~---------------~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~ 705 (826)
..+. ...++|+.++++++.+++.+|+++|+|+|||+||.+++.++.++| .++++|+.+|.
T Consensus 147 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~v~~~vl~~p~ 225 (337)
T 1vlq_A 147 GPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-KAKALLCDVPF 225 (337)
T ss_dssp SSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-SCCEEEEESCC
T ss_pred ccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-CccEEEECCCc
Confidence 0000 135789999999999988788899999999999999999999988 58999988885
Q ss_pred cc-hhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHH
Q 003363 706 CN-LALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 784 (826)
Q Consensus 706 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~ 784 (826)
.. +..+........+.....+.. .. ..........+...+|...+.++++|+|+++|+.|.++|++++.+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~p~~~~~~~~~~ 300 (337)
T 1vlq_A 226 LCHFRRAVQLVDTHPYAEITNFLK----TH-RDKEEIVFRTLSYFDGVNFAARAKIPALFSVGLMDNICPPSTVFAAYNY 300 (337)
T ss_dssp SCCHHHHHHHCCCTTHHHHHHHHH----HC-TTCHHHHHHHHHTTCHHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred ccCHHHHHhcCCCcchHHHHHHHH----hC-chhHHHHHHhhhhccHHHHHHHcCCCEEEEeeCCCCCCCchhHHHHHHh
Confidence 43 332221111111111111000 00 0001122333445677778889999999999999999999999999988
Q ss_pred HHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 785 LREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 785 l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
++. +++++++++++|.+. ..+....+.+||.++|+
T Consensus 301 l~~---~~~~~~~~~~gH~~~----~~~~~~~~~~fl~~~l~ 335 (337)
T 1vlq_A 301 YAG---PKEIRIYPYNNHEGG----GSFQAVEQVKFLKKLFE 335 (337)
T ss_dssp CCS---SEEEEEETTCCTTTT----HHHHHHHHHHHHHHHHC
T ss_pred cCC---CcEEEEcCCCCCCCc----chhhHHHHHHHHHHHHh
Confidence 864 589999999999863 33567899999999874
No 25
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.88 E-value=1.5e-22 Score=212.40 Aligned_cols=225 Identities=18% Similarity=0.185 Sum_probs=163.5
Q ss_pred cCCCeeEEEEEEecCCC---CCCCCCcEEEEEcCCCCCCC-CccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCC
Q 003363 570 KGAQKPFEAIFVSSSHK---KDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 645 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~---~~~~~~P~vv~~HGg~~~~~-~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~ 645 (826)
..+|..+...+| |+.. ...++.|+||++|||++... ...|...+..|+++||.|+++|+||.+..+
T Consensus 26 ~~~g~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~~~~~--------- 95 (283)
T 3bjr_A 26 KLTATCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAESLAMAFAGHGYQAFYLEYTLLTDQQ--------- 95 (283)
T ss_dssp ECTTSSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHHHHHHHHHTTTCEEEEEECCCTTTCS---------
T ss_pred ecCCCceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccHHHHHHHHhCCcEEEEEeccCCCccc---------
Confidence 334445666677 6642 14568899999999775332 345677888999999999999999965432
Q ss_pred CCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHhCCCc-------------eeEEEecCCccchh
Q 003363 646 KVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK-------------FVAAAARNPLCNLA 709 (826)
Q Consensus 646 ~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~~p~~-------------~~a~v~~~p~~~~~ 709 (826)
........|+.++++++.+.. .+|+++|+|+|||+||.+++.++.++|+. ++++++.+|..++.
T Consensus 96 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~~ 175 (283)
T 3bjr_A 96 PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVVLGYPVISPL 175 (283)
T ss_dssp SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEEEESCCCCTT
T ss_pred cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEEEcCCccccc
Confidence 112235788999999998753 36778999999999999999999999987 89999999987643
Q ss_pred hhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCC
Q 003363 710 LMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 789 (826)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g 789 (826)
..+.... . ....+.. .+...++...+.++.+|+|+++|++|..+|++++..+++.+++.|
T Consensus 176 ~~~~~~~-------~-----~~~~~~~--------~~~~~~~~~~~~~~~~P~lii~G~~D~~~p~~~~~~~~~~l~~~g 235 (283)
T 3bjr_A 176 LGFPKDD-------A-----TLATWTP--------TPNELAADQHVNSDNQPTFIWTTADDPIVPATNTLAYATALATAK 235 (283)
T ss_dssp SBC--------------------CCCC--------CGGGGCGGGSCCTTCCCEEEEEESCCTTSCTHHHHHHHHHHHHTT
T ss_pred ccccccc-------c-----hHHHHHH--------HhHhcCHHHhccCCCCCEEEEEcCCCCCCChHHHHHHHHHHHHCC
Confidence 2110000 0 0000100 123456667778889999999999999999999999999999999
Q ss_pred CCEEEEEeCCCCCCCCCCC------------CHHHHHHHHHHHHHHH
Q 003363 790 VETKVIVFPNDVHGIERPQ------------SDFESFLNIGLWFKKY 824 (826)
Q Consensus 790 ~~~~~~~~p~~~H~~~~~~------------~~~~~~~~i~~w~~~~ 824 (826)
.+++++++++++|.+.... ...++...+.+||+++
T Consensus 236 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 236 IPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp CCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred CCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 9999999999999764322 1246788999999875
No 26
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.88 E-value=3.4e-22 Score=223.32 Aligned_cols=234 Identities=14% Similarity=0.176 Sum_probs=162.5
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHH
Q 003363 575 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 654 (826)
Q Consensus 575 ~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D 654 (826)
.+.+++|.|+ ..++.|+||++||++... +...+..|+++||.|+++||||.++.+ .......++|
T Consensus 160 ~l~~~l~~P~---~~~~~P~Vv~lhG~~~~~----~~~~a~~La~~Gy~Vla~D~rG~~~~~--------~~~~~~~~~d 224 (446)
T 3hlk_A 160 RVRGTLFLPP---EPGPFPGIVDMFGTGGGL----LEYRASLLAGKGFAVMALAYYNYEDLP--------KTMETLHLEY 224 (446)
T ss_dssp TEEEEEEECS---SSCCBCEEEEECCSSCSC----CCHHHHHHHTTTCEEEEECCSSSTTSC--------SCCSEEEHHH
T ss_pred eEEEEEEeCC---CCCCCCEEEEECCCCcch----hhHHHHHHHhCCCEEEEeccCCCCCCC--------cchhhCCHHH
Confidence 5889999997 456789999999986542 234578899999999999999965432 2333356899
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc---cCCCCCCchh-hhh--ccC
Q 003363 655 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV---GTTDIPDWCY-VES--YGS 728 (826)
Q Consensus 655 ~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~---~~~~~~~~~~-~~~--~~~ 728 (826)
+.++++++.++..+|.++|+|+|||+||.+++.++.++|+ ++++|+.+|........ .....+...+ ... ...
T Consensus 225 ~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (446)
T 3hlk_A 225 FEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVTK 303 (446)
T ss_dssp HHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEECS
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhcccccc
Confidence 9999999999988899999999999999999999999998 89999988865321100 0000000000 000 000
Q ss_pred cCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHH-HHHHHHHHhCCCC-EEEEEeCCCCCCCCC
Q 003363 729 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVE-TKVIVFPNDVHGIER 806 (826)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~-~~~~~~l~~~g~~-~~~~~~p~~~H~~~~ 806 (826)
.....+... ...............+.++++|+|+++|++|..+|..+. ..+++.|++.|.+ +++++||+++|.+..
T Consensus 304 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~g~~~~~l~~~pgagH~~~~ 381 (446)
T 3hlk_A 304 DGYADIVDV--LNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGHYIEP 381 (446)
T ss_dssp SSCEECTTC--BCCTTSGGGGGGBCCGGGCCSEEEEEEETTCCSSCHHHHHHHHHHHHHHTTCCCCEEEEETTBCSCCCS
T ss_pred chHHHHHHH--HhchhhccccccccCHHHCCCCEEEEEeCCCCCcChHHHHHHHHHHHHHcCCCCcEEEEECCCCCeECC
Confidence 000000000 000000011122234677889999999999999999554 7899999999988 899999999999831
Q ss_pred ---------------------------CCCHHHHHHHHHHHHHHHcC
Q 003363 807 ---------------------------PQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 807 ---------------------------~~~~~~~~~~i~~w~~~~l~ 826 (826)
.+...+.++.+++||++||+
T Consensus 382 p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~ 428 (446)
T 3hlk_A 382 PYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLG 428 (446)
T ss_dssp TTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 11256789999999999984
No 27
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.88 E-value=3.7e-22 Score=216.81 Aligned_cols=238 Identities=18% Similarity=0.219 Sum_probs=160.4
Q ss_pred eeccCCCeeEEEEEEe-cCCC--------------------CCCCCCcEEEEEcCCCCCCCCc---cchHHHHHHHHC-C
Q 003363 567 NLTKGAQKPFEAIFVS-SSHK--------------------KDCSCDPLIVVLHGGPHSVSLS---SYSKSLAFLSSV-G 621 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~-P~~~--------------------~~~~~~P~vv~~HGg~~~~~~~---~~~~~~~~la~~-G 621 (826)
.+...+| +...+|. |... ...++.|+||++|||++..... .|...++.|+++ |
T Consensus 68 ~~~~~~g--l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~~~~la~~~g 145 (365)
T 3ebl_A 68 IIDQSVG--LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSK 145 (365)
T ss_dssp EEETTTT--EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHT
T ss_pred EecCCCC--ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHHHHHHHHHCC
Confidence 3444556 6667776 8642 2346789999999988654332 256677788775 9
Q ss_pred cEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcC----CCCCC-cEEEEEecchHHHHHHHHHhCCC--
Q 003363 622 YSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG----LANPS-KVTVVGGSHGGFLTTHLIGQAPD-- 694 (826)
Q Consensus 622 ~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~----~~d~~-rv~l~G~S~GG~~a~~~a~~~p~-- 694 (826)
|.|+.+|||++++.. ....++|+.++++|+.++. .+|++ ||+|+|+|+||++++.++.+.++
T Consensus 146 ~~Vv~~dyR~~p~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~~a~~~~~~~ 214 (365)
T 3ebl_A 146 GVVVSVNYRRAPEHR-----------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEG 214 (365)
T ss_dssp SEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHHHHHHHHHTT
T ss_pred CEEEEeeCCCCCCCC-----------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHHHHHHHHhcC
Confidence 999999999865432 2345899999999999764 58999 99999999999999999987665
Q ss_pred -ceeEEEecCCccchhhhccC------CCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCccc-ccCCCC----CcE
Q 003363 695 -KFVAAAARNPLCNLALMVGT------TDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPIS-HISKVK----TPT 762 (826)
Q Consensus 695 -~~~a~v~~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~~~i~----~Pv 762 (826)
.++++|+.+|+++....... ...........+.. .+...... ......+|+. ....++ +|+
T Consensus 215 ~~~~g~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~p~~~~~~~l~~~~~pP~ 287 (365)
T 3ebl_A 215 VKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWK----AYLPEDAD---RDHPACNPFGPNGRRLGGLPFAKS 287 (365)
T ss_dssp CCCCEEEEESCCCCCSSCCHHHHHHTTTSSCCHHHHHHHHH----HHSCTTCC---TTSTTTCTTSTTCCCCTTSCCCCE
T ss_pred CceeeEEEEccccCCCcCChhhhhcCCCcccCHHHHHHHHH----HhCCCCCC---CCCcccCCCCCcchhhccCCCCCE
Confidence 79999999998864321100 00000000000000 00000000 0001122322 223343 689
Q ss_pred EEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCC---CCCCHHHHHHHHHHHHHHHcC
Q 003363 763 IFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE---RPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 763 Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~---~~~~~~~~~~~i~~w~~~~l~ 826 (826)
||+||+.|..+ .++.+++++|++.|+++++++|||++|++. ..+...++++.+.+||+++++
T Consensus 288 Li~~G~~D~l~--~~~~~~~~~L~~~g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~i~~Fl~~~~~ 352 (365)
T 3ebl_A 288 LIIVSGLDLTC--DRQLAYADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLNANLY 352 (365)
T ss_dssp EEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETTCCTTGGGSSCSHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEcCcccch--hHHHHHHHHHHHCCCCEEEEEECCCcEEEeccCCCHHHHHHHHHHHHHHHHhhh
Confidence 99999999765 667899999999999999999999999876 234456789999999999875
No 28
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.88 E-value=5e-22 Score=206.29 Aligned_cols=241 Identities=10% Similarity=0.053 Sum_probs=165.5
Q ss_pred ccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCC
Q 003363 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (826)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~ 648 (826)
...+|..++++++.|. +.+.|+||++||++.......|...+..|+++||.|+++|+||.+....... ....
T Consensus 27 ~~~~g~~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~----~~~~ 98 (270)
T 3pfb_A 27 LERDGLQLVGTREEPF----GEIYDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDGKFE----NMTV 98 (270)
T ss_dssp EEETTEEEEEEEEECS----SSSEEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTSSSCGG----GCCH
T ss_pred eccCCEEEEEEEEcCC----CCCCCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccccccCCCCCCC----ccCH
Confidence 3446889999999886 3458999999997766434457778889999999999999999554432211 0111
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccC
Q 003363 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 728 (826)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 728 (826)
...++|+.++++++.++. +.++++|+|||+||.+++.++.++|++++++|+.+|.................+......
T Consensus 99 ~~~~~d~~~~i~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (270)
T 3pfb_A 99 LNEIEDANAILNYVKTDP--HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIP 176 (270)
T ss_dssp HHHHHHHHHHHHHHHTCT--TEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETTEECCTTSCC
T ss_pred HHHHHhHHHHHHHHHhCc--CCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhccccCccccc
Confidence 223688889999988763 346999999999999999999999999999999999876532111000000000000000
Q ss_pred cCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCC
Q 003363 729 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 808 (826)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~ 808 (826)
.................+...+....+.++++|+|+++|++|..+|++.+..+.+.++ .++++++++++|.+. .+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~-~~ 251 (270)
T 3pfb_A 177 DRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQ----NSTLHLIEGADHCFS-DS 251 (270)
T ss_dssp SEEEETTEEEEHHHHHHHHHCCHHHHHTTCCSCEEEEEETTCSSSCTHHHHHHHHHCS----SEEEEEETTCCTTCC-TH
T ss_pred ccccccccccchhHhhcccccCHHHHHhhCCccEEEEEcCCCCCCCHHHHHHHHHhCC----CCeEEEcCCCCcccC-cc
Confidence 0000000000112233344455666788999999999999999999999988887764 489999999999876 44
Q ss_pred CHHHHHHHHHHHHHHH
Q 003363 809 SDFESFLNIGLWFKKY 824 (826)
Q Consensus 809 ~~~~~~~~i~~w~~~~ 824 (826)
...++.+.+.+||+++
T Consensus 252 ~~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 252 YQKNAVNLTTDFLQNN 267 (270)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred chHHHHHHHHHHHhhc
Confidence 4557888999999875
No 29
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.88 E-value=6.9e-21 Score=195.58 Aligned_cols=202 Identities=17% Similarity=0.215 Sum_probs=158.5
Q ss_pred ccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC---CCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCC
Q 003363 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV---SLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 645 (826)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~---~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~ 645 (826)
...+| .+.++++.|. +++.|+||++||.+... ....+...+..|+++||.|+++|+||.+..... .
T Consensus 29 ~~~~g-~l~~~~~~p~----~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~s~~~------~ 97 (249)
T 2i3d_A 29 NGPAG-RLEGRYQPSK----EKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGE------F 97 (249)
T ss_dssp EETTE-EEEEEEECCS----STTCCEEEEECCCGGGTCCTTSHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC------C
T ss_pred ECCCc-eEEEEEEcCC----CCCCCEEEEECCCcccCCCccchHHHHHHHHHHHCCCEEEEECCCCCCCCCCC------C
Confidence 33455 7999988875 35679999999964221 122446678889999999999999995433221 1
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhh
Q 003363 646 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 725 (826)
Q Consensus 646 ~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~ 725 (826)
.......+|+.++++++.++. .+.++|+|+|||+||.+++.++.++|+ ++++|+.+|..+...
T Consensus 98 ~~~~~~~~d~~~~i~~l~~~~-~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--------------- 160 (249)
T 2i3d_A 98 DHGAGELSDAASALDWVQSLH-PDSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD--------------- 160 (249)
T ss_dssp CSSHHHHHHHHHHHHHHHHHC-TTCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC---------------
T ss_pred CCccchHHHHHHHHHHHHHhC-CCCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh---------------
Confidence 122345689999999998885 477899999999999999999999998 999999998654210
Q ss_pred ccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHh-CCCCEEEEEeCCCCCCC
Q 003363 726 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALRE-KGVETKVIVFPNDVHGI 804 (826)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~-~g~~~~~~~~p~~~H~~ 804 (826)
...+.++++|+|+++|++|..+|++++.++++.++. .+.+++++++++++|.+
T Consensus 161 --------------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~H~~ 214 (249)
T 2i3d_A 161 --------------------------FSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKLKTQKGILITHRTLPGANHFF 214 (249)
T ss_dssp --------------------------CTTCTTCCSCEEEEEETTCSSSCHHHHHHHHHHHTTSTTCCEEEEEETTCCTTC
T ss_pred --------------------------hhhhcccCCCEEEEEcCCCCCCCHHHHHHHHHHHhhccCCceeEEEECCCCccc
Confidence 123456789999999999999999999999999986 45679999999999988
Q ss_pred CCCCCHHHHHHHHHHHHHHHcC
Q 003363 805 ERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 805 ~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
. ....++.+.+.+||+++++
T Consensus 215 ~--~~~~~~~~~i~~fl~~~l~ 234 (249)
T 2i3d_A 215 N--GKVDELMGECEDYLDRRLN 234 (249)
T ss_dssp T--TCHHHHHHHHHHHHHHHHT
T ss_pred c--cCHHHHHHHHHHHHHHhcC
Confidence 6 3566889999999998863
No 30
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.88 E-value=1.5e-21 Score=196.19 Aligned_cols=201 Identities=20% Similarity=0.247 Sum_probs=156.4
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCC--C-CCC
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP--G-KVG 648 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~--~-~~~ 648 (826)
+|..+.++++.|.+ +.|+||++||++.......+...++.|+++||.|+++|+|| +|.+...... . ...
T Consensus 20 ~g~~l~~~~~~p~~-----~~p~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~~~~~~~~~ 91 (223)
T 2o2g_A 20 GEVKLKGNLVIPNG-----ATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLT---QEEEEIDLRTRHLRFDI 91 (223)
T ss_dssp TTEEEEEEEECCTT-----CCEEEEEECCTTCCTTCHHHHHHHHHHHHHTCEEEEECSSC---HHHHHHHHHHCSSTTCH
T ss_pred CCeEEEEEEecCCC-----CceEEEEecCCCCCCCccchHHHHHHHHHCCCEEEEEcCCC---cCCCCccchhhcccCcH
Confidence 67889999998863 57999999997765433345567888999999999999998 4443322111 0 111
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccC
Q 003363 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 728 (826)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 728 (826)
....+|+.++++++..+..+|.++++++|||+||.+++.++.++|++++++|+.+|..+..
T Consensus 92 ~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~------------------- 152 (223)
T 2o2g_A 92 GLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLA------------------- 152 (223)
T ss_dssp HHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGC-------------------
T ss_pred HHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcC-------------------
Confidence 2236889999999998877899999999999999999999999999999999998864320
Q ss_pred cCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCC
Q 003363 729 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 808 (826)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~ 808 (826)
...+.++++|+|+++|++|..+|... .+.+.+.+.+++++++++++|.+..++
T Consensus 153 -----------------------~~~~~~~~~P~l~i~g~~D~~~~~~~----~~~~~~~~~~~~~~~~~~~~H~~~~~~ 205 (223)
T 2o2g_A 153 -----------------------PSALPHVKAPTLLIVGGYDLPVIAMN----EDALEQLQTSKRLVIIPRASHLFEEPG 205 (223)
T ss_dssp -----------------------TTTGGGCCSCEEEEEETTCHHHHHHH----HHHHHHCCSSEEEEEETTCCTTCCSTT
T ss_pred -----------------------HHHHhcCCCCEEEEEccccCCCCHHH----HHHHHhhCCCeEEEEeCCCCcccCChH
Confidence 02345577999999999999886333 345555567899999999999987666
Q ss_pred CHHHHHHHHHHHHHHHcC
Q 003363 809 SDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 809 ~~~~~~~~i~~w~~~~l~ 826 (826)
...++...+.+||+++|+
T Consensus 206 ~~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 206 ALTAVAQLASEWFMHYLR 223 (223)
T ss_dssp HHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 667889999999999986
No 31
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.88 E-value=9.2e-22 Score=199.92 Aligned_cols=208 Identities=18% Similarity=0.152 Sum_probs=159.0
Q ss_pred eccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhc-----
Q 003363 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQS----- 642 (826)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~----- 642 (826)
+...+|..+.++++.|. +++.|+||++||+... ...+...+..|+++||.|+++|+||.+..+......
T Consensus 8 ~~~~~g~~l~~~~~~p~----~~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~~~~~~ 81 (236)
T 1zi8_A 8 IQSYDGHTFGALVGSPA----KAPAPVIVIAQDIFGV--NAFMRETVSWLVDQGYAAVCPDLYARQAPGTALDPQDERQR 81 (236)
T ss_dssp EECTTSCEECEEEECCS----SCSEEEEEEECCTTBS--CHHHHHHHHHHHHTTCEEEEECGGGGTSTTCBCCTTCHHHH
T ss_pred EecCCCCeEEEEEECCC----CCCCCEEEEEcCCCCC--CHHHHHHHHHHHhCCcEEEeccccccCCCcccccccchhhh
Confidence 34456788999999886 3578999999997654 346777888999999999999999865543211000
Q ss_pred ------CCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCC
Q 003363 643 ------LPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD 716 (826)
Q Consensus 643 ------~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~ 716 (826)
..........+|+.++++++.++..++ ++|+|+|||+||.+++.++.++| ++++++.+|....
T Consensus 82 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~-------- 150 (236)
T 1zi8_A 82 EQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE-------- 150 (236)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG--------
T ss_pred hhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc--------
Confidence 000011223678999999998775444 79999999999999999999988 8888877763210
Q ss_pred CCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEE
Q 003363 717 IPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 796 (826)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 796 (826)
++...+.++++|+|+++|++|..+|++.+..+++.+++.+ ++++++
T Consensus 151 ---------------------------------~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~ 196 (236)
T 1zi8_A 151 ---------------------------------KQLNKVPEVKHPALFHMGGQDHFVPAPSRQLITEGFGANP-LLQVHW 196 (236)
T ss_dssp ---------------------------------GCGGGGGGCCSCEEEEEETTCTTSCHHHHHHHHHHHTTCT-TEEEEE
T ss_pred ---------------------------------cchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC-CceEEE
Confidence 1233456678999999999999999999999999997755 899999
Q ss_pred eCCCCCCCCCCCC-------HHHHHHHHHHHHHHHcC
Q 003363 797 FPNDVHGIERPQS-------DFESFLNIGLWFKKYCK 826 (826)
Q Consensus 797 ~p~~~H~~~~~~~-------~~~~~~~i~~w~~~~l~ 826 (826)
+++++|.+..... ..+.++.+.+||+++++
T Consensus 197 ~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 233 (236)
T 1zi8_A 197 YEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQS 233 (236)
T ss_dssp ETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC
T ss_pred ECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcC
Confidence 9999998775432 34688999999999875
No 32
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.88 E-value=5.6e-21 Score=206.50 Aligned_cols=304 Identities=13% Similarity=0.125 Sum_probs=194.5
Q ss_pred CcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCC-CCCeEEEEe
Q 003363 107 NGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN-ESPIQFELW 185 (826)
Q Consensus 107 dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~-~~~~~~~i~ 185 (826)
||++|+|.....+...+.....||++++. +++.++| ..+..++|||||++|||++..++ +..+++.+.
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~--~~~~~~l---------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~ 91 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLK--NNARRFI---------ENATMPRISPDGKKIAFMRANEEKKVSEIWVAD 91 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETT--TCCEEEE---------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCC--CCceEEc---------ccCCCeEECCCCCEEEEEEeccCCCcceEEEEE
Confidence 99999999877766666678889998864 3344444 24788999999999999986542 445677777
Q ss_pred -cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCC
Q 003363 186 -SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWG 264 (826)
Q Consensus 186 -~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g 264 (826)
.+++.++++.... . ..+.|||||++|+|.+.+..... . ........|..+ |
T Consensus 92 ~~~g~~~~l~~~~~-~----------~~~~wspdg~~l~~~~~~~~~~~----------~------~~~~~~~~~~~~-g 143 (347)
T 2gop_A 92 LETLSSKKILEAKN-I----------RSLEWNEDSRKLLIVGFKRREDE----------D------FIFEDDVPAWFD-D 143 (347)
T ss_dssp TTTTEEEEEEEESE-E----------EEEEECTTSSEEEEEEECCCC-------------------------CCCC----
T ss_pred CCCCceEEEEcCCC-c----------cceeECCCCCEEEEEEccCCCcC----------C------cEEEcccceeec-C
Confidence 5677777776543 3 78999999999999986421000 0 000011112212 2
Q ss_pred ccCCCccCceEEEEEccCCce-EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcc
Q 003363 265 ETYAGKRQPSLFVININSGEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVS 343 (826)
Q Consensus 265 ~~~~~~~~~~l~v~d~~~g~~-~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 343 (826)
..+......+||++|+++++. +.++ . . .+..+.||||| . ++......... +......||.+| .
T Consensus 144 ~~~~~~~~~~l~~~d~~~~~~~~~l~--~-~-~~~~~~~spdg-~----~~~~~~~~~~~------~~~~~~~l~~~d-~ 207 (347)
T 2gop_A 144 LGFFDGEKTTFWIFDTESEEVIEEFE--K-P-RFSSGIWHRDK-I----VVNVPHREIIP------QYFKFWDIYIWE-D 207 (347)
T ss_dssp ------CEEEEEEEETTTTEEEEEEE--E-E-TTCEEEEETTE-E----EEEEECCCSSC------CSSCCEEEEEEE-T
T ss_pred cccccCccceEEEEECCCCeEEeeec--C-C-CcccccCCCCe-E----EEEEecccccc------cccccccEEEeC-C
Confidence 222223457899999999998 7774 3 3 67889999998 6 65543211100 000133788887 2
Q ss_pred cccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccce
Q 003363 344 LYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI 423 (826)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 423 (826)
++.++|+.+ .....+ ||||++|+|.+..... ......+||++| +++.+.++...
T Consensus 208 ------------------~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~---~~~~~~~l~~~d--~~~~~~l~~~~ 261 (347)
T 2gop_A 208 ------------------GKEEKMFEK-VSFYAV--DSDGERILLYGKPEKK---YMSEHNKLYIYD--GKEVMGILDEV 261 (347)
T ss_dssp ------------------TEEEEEEEE-ESEEEE--EECSSCEEEEECCSSS---CCCSSCEEEEEC--SSCEEESSTTC
T ss_pred ------------------CceEEeccC-cceeeE--CCCCCEEEEEEccccC---CccccceEEEEC--CCceEeccccC
Confidence 345566655 444434 9999999999876421 112346899998 44443333221
Q ss_pred eeeeeeeeccCCCCCcccccCCCCC-CccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEE
Q 003363 424 VDVIPVVQCAEGDCFPGLYSSSILS-NPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNI 502 (826)
Q Consensus 424 ~~~~~~~~~~~~~~f~g~~~~~~~~-~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l 502 (826)
.. .+.. +.|+ || +++.+..++...|| ++ +|+.++++...+.+....+++ .+
T Consensus 262 ~~-------------------~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~--~g~~~~~~~~~~~v~~~~~s~---~~ 313 (347)
T 2gop_A 262 DR-------------------GVGQAKIKD-GK--VYFTLFEEGSVNLY-IW--DGEIKPIAKGRHWIMGFDVDE---IV 313 (347)
T ss_dssp CS-------------------EEEEEEEET-TE--EEEEEEETTEEEEE-EE--SSSEEEEECSSSEEEEEEESS---SE
T ss_pred Cc-------------------ccCCccEEc-Cc--EEEEEecCCcEEEE-Ec--CCceEEEecCCCeEEeeeeeC---cE
Confidence 11 1223 6799 87 77888888899999 99 577788876655444444554 68
Q ss_pred EEEEeCCCCCCeEEEEe
Q 003363 503 IAVSSSPVDVPQVKYGY 519 (826)
Q Consensus 503 ~~~~s~~~~p~~l~~~~ 519 (826)
+++.++...|++||.++
T Consensus 314 ~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 314 VYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEECSSSCCEEEEES
T ss_pred EEEEcCCCChHHheEeC
Confidence 88888999999999987
No 33
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=5e-21 Score=212.37 Aligned_cols=244 Identities=17% Similarity=0.146 Sum_probs=182.1
Q ss_pred CCCCeEEEEecCCCCC--CeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCC
Q 003363 163 PSGSKLLVVRNPENES--PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLG 239 (826)
Q Consensus 163 PdG~~la~~~~~~~~~--~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~ 239 (826)
+.|++|+|++...++. ..++..+ +++..+.++.....+ ..++|||||++|||.+.+.
T Consensus 141 ~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v----------~~~~~Spdg~~la~~s~~~---------- 200 (415)
T 2hqs_A 141 AFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPL----------MSPAWSPDGSKLAYVTFES---------- 200 (415)
T ss_dssp CTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCE----------EEEEECTTSSEEEEEECTT----------
T ss_pred cCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcc----------eeeEEcCCCCEEEEEEecC----------
Confidence 4588999998764221 3455444 444555555433333 7999999999999987543
Q ss_pred CCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeec
Q 003363 240 STKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWS 319 (826)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~ 319 (826)
+...|++||+.+++.+.+ ......+..++|||||+. |+|++..
T Consensus 201 -------------------------------~~~~i~~~d~~tg~~~~l--~~~~~~~~~~~~spdg~~----la~~~~~ 243 (415)
T 2hqs_A 201 -------------------------------GRSALVIQTLANGAVRQV--ASFPRHNGAPAFSPDGSK----LAFALSK 243 (415)
T ss_dssp -------------------------------SSCEEEEEETTTCCEEEE--ECCSSCEEEEEECTTSSE----EEEEECT
T ss_pred -------------------------------CCcEEEEEECCCCcEEEe--ecCCCcccCEEEcCCCCE----EEEEEec
Confidence 236899999999998888 334446778999999999 9988732
Q ss_pred CcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCC
Q 003363 320 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 399 (826)
Q Consensus 320 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~ 399 (826)
+....||++|+ .+++.++++.+...+..+.|||||++|+|.+.++
T Consensus 244 ------------~g~~~i~~~d~-----------------~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~------ 288 (415)
T 2hqs_A 244 ------------TGSLNLYVMDL-----------------ASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQA------ 288 (415)
T ss_dssp ------------TSSCEEEEEET-----------------TTCCEEECCCCSSCEEEEEECTTSSEEEEEECTT------
T ss_pred ------------CCCceEEEEEC-----------------CCCCEEeCcCCCCcccceEECCCCCEEEEEECCC------
Confidence 23347999998 7788888988877888999999999999998653
Q ss_pred CcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCc
Q 003363 400 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 479 (826)
Q Consensus 400 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~ 479 (826)
+..+||++|+.++....++.... ....+.|+|||+.|++.+...+...|+.+|+.+++
T Consensus 289 --g~~~i~~~d~~~~~~~~l~~~~~--------------------~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 289 --GRPQVYKVNINGGAPQRITWEGS--------------------QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp --SSCEEEEEETTSSCCEECCCSSS--------------------EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred --CCcEEEEEECCCCCEEEEecCCC--------------------cccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 34689999998866543332110 12356899999999988877777899999999999
Q ss_pred EEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 480 LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 480 ~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
.+.++... ......|+++|+.|++...... ...|++.++.+
T Consensus 347 ~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~-~~~l~~~d~~g 387 (415)
T 2hqs_A 347 VQVLSSTF-LDETPSLAPNGTMVIYSSSQGM-GSVLNLVSTDG 387 (415)
T ss_dssp EEECCCSS-SCEEEEECTTSSEEEEEEEETT-EEEEEEEETTS
T ss_pred EEEecCCC-CcCCeEEcCCCCEEEEEEcCCC-ccEEEEEECCC
Confidence 98887664 4566789999998888775443 45688888653
No 34
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.87 E-value=6.5e-21 Score=227.94 Aligned_cols=312 Identities=12% Similarity=0.094 Sum_probs=194.6
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccce-eecCCcceecccEEEEeCCCCCeEEEEecCCC---
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTF-QWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN--- 176 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~l-t~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~--- 176 (826)
...++|||+.++.. + ..|+++++.++ +..++ +...+.........++|||||++|+|..+...
T Consensus 21 ~~~w~~dg~~~~~~----~-------~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r 87 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ----E-------NNILVFNAEYG--NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWR 87 (740)
T ss_dssp CEEECSSSEEEEEE----T-------TEEEEEETTTC--CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSS
T ss_pred ccEECCCCcEEEEc----C-------CcEEEEECCCC--ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEE
Confidence 45678999766442 1 36777776433 32333 22221110011234899999999999886421
Q ss_pred --CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCC
Q 003363 177 --ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSW 253 (826)
Q Consensus 177 --~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (826)
....++..+ .+++.++++..... ...++|||||++|||++
T Consensus 88 ~~~~~~~~~~d~~~~~~~~l~~~~~~----------~~~~~~SPdG~~la~~~--------------------------- 130 (740)
T 4a5s_A 88 HSYTASYDIYDLNKRQLITEERIPNN----------TQWVTWSPVGHKLAYVW--------------------------- 130 (740)
T ss_dssp SCEEEEEEEEETTTTEECCSSCCCTT----------EEEEEECSSTTCEEEEE---------------------------
T ss_pred EccceEEEEEECCCCcEEEcccCCCc----------ceeeEECCCCCEEEEEE---------------------------
Confidence 112345444 45554443322222 27899999999999983
Q ss_pred CCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCC------------------ccceEEEeeCCCCCccEEEE
Q 003363 254 KGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL------------------SVGQVVWAPLNEGLHQYLVF 315 (826)
Q Consensus 254 ~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~------------------~~~~~~wSPDg~~~~~~lvf 315 (826)
+.+||++|+.+|+.++++ ..+.. ....+.|||||+. |+|
T Consensus 131 ------------------~~~i~~~~~~~~~~~~lt-~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~----la~ 187 (740)
T 4a5s_A 131 ------------------NNDIYVKIEPNLPSYRIT-WTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF----LAY 187 (740)
T ss_dssp ------------------TTEEEEESSTTSCCEECC-SCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE----EEE
T ss_pred ------------------CCeEEEEECCCCceEEEc-CCCCccceecCcccccccchhcCCCcceEECCCCCE----EEE
Confidence 257999999999998884 11211 1124899999999 999
Q ss_pred EeecCc-ceeee----------------eeeec----cCCCceEEEEcccccchhhhhhhhcCCCCC---C---cceecC
Q 003363 316 VGWSSE-TRKLG----------------IKYCY----NRPCALYAVRVSLYKSEASELELKESSSED---L---PVVNLT 368 (826)
Q Consensus 316 ~~~~~~-~~~~g----------------~~~~~----~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~---~---~~~~Lt 368 (826)
.+.+.. .+... +.|.. +....|+++|+ ++ + ..++|.
T Consensus 188 ~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~-----------------~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 188 AQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNT-----------------DSLSSVTNATSIQIT 250 (740)
T ss_dssp EEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEET-----------------TSCCSSSCCCEEEEC
T ss_pred EEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEEC-----------------CCCCCCCcceEEEec
Confidence 874433 11111 11111 12236888998 55 5 556665
Q ss_pred C------CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCC----CCcccceeeeeeeeeccCCCCC
Q 003363 369 E------SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN----FSSLEKIVDVIPVVQCAEGDCF 438 (826)
Q Consensus 369 ~------~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~f 438 (826)
. +......++|||||+.+++..++. .....|+++|+.+++. ..+.. + .....+.
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~-------~~~~~i~~~d~~tg~~~~~~~~~~~----l---~~~~~~~-- 314 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRI-------QNYSVMDICDYDESSGRWNCLVARQ----H---IEMSTTG-- 314 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESS-------TTEEEEEEEEEETTTTEEEECGGGC----E---EEECSSS--
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCC-------CCEEEEEEEECCCCccccceeEEEE----e---eeccCCc--
Confidence 4 455678899999999888887764 2346799999988761 11100 0 0000000
Q ss_pred cccccC--CCCCCccccCCCEEE-EEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeC---CCCC
Q 003363 439 PGLYSS--SILSNPWLSDGCTML-LSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS---PVDV 512 (826)
Q Consensus 439 ~g~~~~--~~~~~~ws~Dg~~l~-~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~---~~~p 512 (826)
|.. ....+.|||||+.|+ +.+..++..+||.+|+++++.++||.+...+.. .+++|++.|+|.+.. ...-
T Consensus 315 ---~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~-~~~~d~~~i~f~~~~~~~~~~~ 390 (740)
T 4a5s_A 315 ---WVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIG-IEALTSDYLYYISNEYKGMPGG 390 (740)
T ss_dssp ---CSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEE-EEEECSSEEEEEESCGGGCTTC
T ss_pred ---eEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEE-EEEEeCCEEEEEEecCCCCCce
Confidence 100 123678999999988 666677889999999999999999988765543 345778889888865 1223
Q ss_pred CeEEEEeecc
Q 003363 513 PQVKYGYFVD 522 (826)
Q Consensus 513 ~~l~~~~~~~ 522 (826)
..||.+++.+
T Consensus 391 ~~ly~v~~~g 400 (740)
T 4a5s_A 391 RNLYKIQLID 400 (740)
T ss_dssp BEEEEEETTE
T ss_pred eEEEEEECCC
Confidence 4677777654
No 35
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.87 E-value=1.9e-21 Score=208.44 Aligned_cols=227 Identities=15% Similarity=0.206 Sum_probs=162.5
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CccchHHHHHHHH-CCcEEEEECCCCCCCCchhhhhcCC
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLP 644 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-~~~~~~~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~ 644 (826)
++...+| .+.+.+|.|.+ ...|+||++|||++... ...+...+..|++ .||.|+++|||+++++.
T Consensus 67 ~~~~~~g-~i~~~~~~p~~----~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~-------- 133 (326)
T 3ga7_A 67 AVPTPYG-DVTTRLYSPQP----TSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQAR-------- 133 (326)
T ss_dssp EECCTTS-CEEEEEEESSS----SCSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSC--------
T ss_pred EeecCCC-CeEEEEEeCCC----CCCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCC--------
Confidence 3344455 79999999974 23399999999884432 3456677888877 89999999999865531
Q ss_pred CCCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHhCCCc------eeEEEecCCccchhhhccCC
Q 003363 645 GKVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK------FVAAAARNPLCNLALMVGTT 715 (826)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~~p~~------~~a~v~~~p~~~~~~~~~~~ 715 (826)
....++|+.++++|+.++. .+|++||+|+|+|+||.+++.++.++++. ++++++.+|+.+......
T Consensus 134 ---~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~-- 208 (326)
T 3ga7_A 134 ---YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVS-- 208 (326)
T ss_dssp ---TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCSCSCCHH--
T ss_pred ---CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccccCCChh--
Confidence 2335799999999999863 47899999999999999999999887764 899999999875421100
Q ss_pred CCCCchhhhhccCcCCccCCCCCChhhHHHH---------hhcCcc-----cccCCCCCcEEEEEeCCCCCCCcHHHHHH
Q 003363 716 DIPDWCYVESYGSKGKDSFTESPSVEDLTRF---------HSKSPI-----SHISKVKTPTIFLLGAQDLRVPVSNGLQY 781 (826)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~sp~-----~~~~~i~~PvLii~G~~D~~vp~~~~~~~ 781 (826)
...+... +. ....+....+ ...+|. ..+.+..+|+||+||+.|.++ .++.++
T Consensus 209 -------~~~~~~~----~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~~--~~~~~~ 274 (326)
T 3ga7_A 209 -------RRLFGGA----WD-GLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLI--DDSRLL 274 (326)
T ss_dssp -------HHHCCCT----TT-TCCHHHHHHHHHHHCSSGGGGGCTTTSGGGSCCSSCCCCEEEEEETTCTTH--HHHHHH
T ss_pred -------HhhhcCC----CC-CCCHHHHHHHHHHhCCCCCccCCcccCCCcchhhcCCCCEEEEecCcCcCH--HHHHHH
Confidence 0000000 00 0001111111 011221 233345679999999999998 688999
Q ss_pred HHHHHhCCCCEEEEEeCCCCCCCCCCC----CHHHHHHHHHHHHHHHc
Q 003363 782 ARALREKGVETKVIVFPNDVHGIERPQ----SDFESFLNIGLWFKKYC 825 (826)
Q Consensus 782 ~~~l~~~g~~~~~~~~p~~~H~~~~~~----~~~~~~~~i~~w~~~~l 825 (826)
+++|++.|+++++++|||++|++.... ...++++.+.+||+++|
T Consensus 275 ~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l 322 (326)
T 3ga7_A 275 HQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARM 322 (326)
T ss_dssp HHHHHHTTCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999985322 34588899999999987
No 36
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.87 E-value=2.1e-21 Score=207.49 Aligned_cols=224 Identities=17% Similarity=0.268 Sum_probs=158.8
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-ccchHHHHHHHH-CCcEEEEECCCCCCCCchhhhhcCCCCCCcchH
Q 003363 575 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 652 (826)
Q Consensus 575 ~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~~~~~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~ 652 (826)
.+.+++|.|+ ..++.|+||++|||++.... ..+...+..|+. .||.|+++|||+++++ .....+
T Consensus 66 ~i~~~~~~p~---~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~-----------~~~~~~ 131 (322)
T 3fak_A 66 GCAAEWVRAP---GCQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEH-----------PFPAAV 131 (322)
T ss_dssp TEEEEEEECT---TCCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTS-----------CTTHHH
T ss_pred CeEEEEEeCC---CCCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCC-----------CCCcHH
Confidence 3788899997 35678999999998865433 345556666665 6999999999986543 223458
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCc----eeEEEecCCccchhhhccCCCCCCchhhhhccC
Q 003363 653 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 728 (826)
Q Consensus 653 ~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 728 (826)
+|+.++++|+.++ .+|++||+|+|+|+||++++.++.+.++. ++++|+.+|+.++..... .+. .. ..
T Consensus 132 ~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~-----~~~--~~-~~ 202 (322)
T 3fak_A 132 EDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTND-----SFK--TR-AE 202 (322)
T ss_dssp HHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCT-----HHH--HT-TT
T ss_pred HHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCc-----CHH--Hh-Cc
Confidence 9999999999998 58999999999999999999999876654 999999999987532110 000 00 00
Q ss_pred cCCccCCCCCChh-hHHHH--------hhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 003363 729 KGKDSFTESPSVE-DLTRF--------HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 799 (826)
Q Consensus 729 ~~~~~~~~~~~~~-~~~~~--------~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~ 799 (826)
...+....... ....+ ...+|+...-+..+|+||+||+.|.++ .++..++++|++.|+++++++||+
T Consensus 203 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~g~~D~~~--~~~~~~~~~l~~~g~~~~~~~~~g 278 (322)
T 3fak_A 203 --ADPMVAPGGINKMAARYLNGADAKHPYASPNFANLKGLPPLLIHVGRDEVLL--DDSIKLDAKAKADGVKSTLEIWDD 278 (322)
T ss_dssp --TCCSCCSSHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEETTSTTH--HHHHHHHHHHHHTTCCEEEEEETT
T ss_pred --cCcccCHHHHHHHHHHhcCCCCCCCcccCCCcccccCCChHhEEEcCcCccH--HHHHHHHHHHHHcCCCEEEEEeCC
Confidence 00000000000 00111 123444222223369999999999875 788999999999999999999999
Q ss_pred CCCCCCC----CCCHHHHHHHHHHHHHHHc
Q 003363 800 DVHGIER----PQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 800 ~~H~~~~----~~~~~~~~~~i~~w~~~~l 825 (826)
++|++.. .+...+.++.+.+||+++|
T Consensus 279 ~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 308 (322)
T 3fak_A 279 MIHVWHAFHPMLPEGKQAIVRVGEFMREQW 308 (322)
T ss_dssp CCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred ceeehhhccCCCHHHHHHHHHHHHHHHHHH
Confidence 9998753 2334578899999999986
No 37
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.87 E-value=8e-22 Score=206.57 Aligned_cols=222 Identities=18% Similarity=0.187 Sum_probs=148.5
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (826)
+..+.||++||.+.+ ...|..+++.|+++||.|+++|+||.|.+.... .... ....++|+.++++++.+.
T Consensus 49 G~~~~VlllHG~~~s--~~~~~~la~~La~~Gy~Via~Dl~GhG~S~~~~---~~~~-~~~~~~d~~~~~~~l~~~---- 118 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGS--PQSMRFLAEGFARAGYTVATPRLTGHGTTPAEM---AAST-ASDWTADIVAAMRWLEER---- 118 (281)
T ss_dssp CSSEEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEECCCTTSSSCHHHH---HTCC-HHHHHHHHHHHHHHHHHH----
T ss_pred CCCceEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEECCCCCCCCCccc---cCCC-HHHHHHHHHHHHHHHHhC----
Confidence 345669999996544 457888999999999999999999954432221 1111 112267888888888765
Q ss_pred CCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhh-----ccCCCCCCch--hhhhccCcCCccC--CCCCCh
Q 003363 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-----VGTTDIPDWC--YVESYGSKGKDSF--TESPSV 740 (826)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~ 740 (826)
.++++|+||||||.+++.++.++|++++++|+.+|...+... ........+. ............+ ...+ .
T Consensus 119 ~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 197 (281)
T 4fbl_A 119 CDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTP-V 197 (281)
T ss_dssp CSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEE-G
T ss_pred CCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCc-h
Confidence 368999999999999999999999999999999987543210 0000000000 0000000000000 0000 0
Q ss_pred hhHHHHhh--cCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 003363 741 EDLTRFHS--KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIG 818 (826)
Q Consensus 741 ~~~~~~~~--~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~ 818 (826)
.....+.. ......+.++++|+|+++|++|..+|+++++.+++.+.. .+++++++|++||.+.......++.+.|.
T Consensus 198 ~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~v~~~~~~~l~~~l~~--~~~~l~~~~~~gH~~~~e~~~e~v~~~i~ 275 (281)
T 4fbl_A 198 PAIKHLITIGAVAEMLLPRVKCPALIIQSREDHVVPPHNGELIYNGIGS--TEKELLWLENSYHVATLDNDKELILERSL 275 (281)
T ss_dssp GGHHHHHHHHHHHHHHGGGCCSCEEEEEESSCSSSCTHHHHHHHHHCCC--SSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred HHHHHHHHhhhhccccccccCCCEEEEEeCCCCCcCHHHHHHHHHhCCC--CCcEEEEECCCCCcCccccCHHHHHHHHH
Confidence 11111110 011234678999999999999999999999999988753 46899999999998766655668899999
Q ss_pred HHHHHH
Q 003363 819 LWFKKY 824 (826)
Q Consensus 819 ~w~~~~ 824 (826)
+||++|
T Consensus 276 ~FL~~H 281 (281)
T 4fbl_A 276 AFIRKH 281 (281)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999987
No 38
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.87 E-value=2.3e-21 Score=206.48 Aligned_cols=241 Identities=17% Similarity=0.157 Sum_probs=165.4
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCC--
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP-- 644 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~-- 644 (826)
.+...+|..+.++++.|++ .++.|+||++||+++.. ...+. ....|+++||.|+++|+||.++++........
T Consensus 60 ~~~~~~g~~i~~~~~~P~~---~~~~p~vv~~HG~~~~~-~~~~~-~~~~l~~~g~~v~~~d~rg~g~s~~~~~~~~~~~ 134 (318)
T 1l7a_A 60 TYKSFGNARITGWYAVPDK---EGPHPAIVKYHGYNASY-DGEIH-EMVNWALHGYATFGMLVRGQQRSEDTSISPHGHA 134 (318)
T ss_dssp EEEEGGGEEEEEEEEEESS---CSCEEEEEEECCTTCCS-GGGHH-HHHHHHHTTCEEEEECCTTTSSSCCCCCCSSCCS
T ss_pred EEEccCCCEEEEEEEeeCC---CCCccEEEEEcCCCCCC-CCCcc-cccchhhCCcEEEEecCCCCCCCCCcccccCCcc
Confidence 3444467889999999974 56789999999987540 22333 33477889999999999997765433210000
Q ss_pred -----CCC-------CcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccc-hhhh
Q 003363 645 -----GKV-------GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-LALM 711 (826)
Q Consensus 645 -----~~~-------~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~-~~~~ 711 (826)
... ....++|+.++++++.++..+|.++|+|+|||+||.+++.++..+|+ ++++|+.+|... +...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~~~p~~~~~~~~ 213 (318)
T 1l7a_A 135 LGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVADYPYLSNFERA 213 (318)
T ss_dssp SSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEEESCCSCCHHHH
T ss_pred ccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEecCCcccCHHHH
Confidence 000 02347899999999999877888999999999999999999999886 677777888543 3222
Q ss_pred ccCCCCCCchhhhhccCcCCccCCCCC--ChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCC
Q 003363 712 VGTTDIPDWCYVESYGSKGKDSFTESP--SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG 789 (826)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g 789 (826)
........|.....+.. .. ..+ ...........++...+.++++|+|+++|+.|..+|++++.++++++..
T Consensus 214 ~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~-- 286 (318)
T 1l7a_A 214 IDVALEQPYLEINSFFR----RN-GSPETEVQAMKTLSYFDIMNLADRVKVPVLMSIGLIDKVTPPSTVFAAYNHLET-- 286 (318)
T ss_dssp HHHCCSTTTTHHHHHHH----HS-CCHHHHHHHHHHHHTTCHHHHGGGCCSCEEEEEETTCSSSCHHHHHHHHHHCCS--
T ss_pred HhcCCcCccHHHHHHHh----cc-CCcccHHHHHHhhccccHHHHHhhCCCCEEEEeccCCCCCCcccHHHHHhhcCC--
Confidence 11111111111100000 00 000 0111222334456677888899999999999999999999999888865
Q ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 790 VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 790 ~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
+++++++++++|.. ..+....+.+||+++|+
T Consensus 287 -~~~~~~~~~~~H~~-----~~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 287 -KKELKVYRYFGHEY-----IPAFQTEKLAFFKQILK 317 (318)
T ss_dssp -SEEEEEETTCCSSC-----CHHHHHHHHHHHHHHHC
T ss_pred -CeeEEEccCCCCCC-----cchhHHHHHHHHHHHhC
Confidence 48999999999983 24678999999999875
No 39
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.87 E-value=1.2e-21 Score=212.04 Aligned_cols=241 Identities=14% Similarity=0.148 Sum_probs=167.1
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCC--
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP-- 644 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~-- 644 (826)
.+...+|..++++++.|++ .++.|+||++||++... ..|.... .++++||.|+++|+||.++++........
T Consensus 86 ~~~~~~g~~l~~~~~~P~~---~~~~p~vv~~HG~g~~~--~~~~~~~-~~~~~G~~v~~~D~rG~g~s~~~~~~~~~~~ 159 (346)
T 3fcy_A 86 YFTGVRGARIHAKYIKPKT---EGKHPALIRFHGYSSNS--GDWNDKL-NYVAAGFTVVAMDVRGQGGQSQDVGGVTGNT 159 (346)
T ss_dssp EEECGGGCEEEEEEEEESC---SSCEEEEEEECCTTCCS--CCSGGGH-HHHTTTCEEEEECCTTSSSSCCCCCCCSSCC
T ss_pred EEEcCCCCEEEEEEEecCC---CCCcCEEEEECCCCCCC--CChhhhh-HHHhCCcEEEEEcCCCCCCCCCCCcccCCCC
Confidence 4555578899999999984 57789999999987663 3344333 56789999999999997665433211000
Q ss_pred --C--------C----CCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccc-hh
Q 003363 645 --G--------K----VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-LA 709 (826)
Q Consensus 645 --~--------~----~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~-~~ 709 (826)
+ . .....++|+.++++++.....+|.++|+|+|||+||.+++.++.++|+ ++++|+.+|... +.
T Consensus 160 ~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~vl~~p~~~~~~ 238 (346)
T 3fcy_A 160 LNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVVSEYPFLSDYK 238 (346)
T ss_dssp SBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEEEESCSSCCHH
T ss_pred cCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEEECCCcccCHH
Confidence 0 0 001125899999999998877889999999999999999999999998 999999998653 22
Q ss_pred hhccCC-CCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhC
Q 003363 710 LMVGTT-DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK 788 (826)
Q Consensus 710 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~ 788 (826)
...... ....+.....+.... .............+...++...+.++++|+|+++|+.|..+|++.+.++++++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~- 315 (346)
T 3fcy_A 239 RVWDLDLAKNAYQEITDYFRLF--DPRHERENEVFTKLGYIDVKNLAKRIKGDVLMCVGLMDQVCPPSTVFAAYNNIQS- 315 (346)
T ss_dssp HHHHTTCCCGGGHHHHHHHHHH--CTTCTTHHHHHHHHGGGCHHHHGGGCCSEEEEEEETTCSSSCHHHHHHHHTTCCS-
T ss_pred HHhhccccccchHHHHHHHHhc--CCCcchHHHHHHHhCcccHHHHHHhcCCCEEEEeeCCCCcCCHHHHHHHHHhcCC-
Confidence 211111 111111000000000 0000111222334445566677889999999999999999999999888887754
Q ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 789 GVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 789 g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
+++++++|+++|.+. .++...+.+||++.
T Consensus 316 --~~~~~~~~~~gH~~~-----~~~~~~i~~fl~~l 344 (346)
T 3fcy_A 316 --KKDIKVYPDYGHEPM-----RGFGDLAMQFMLEL 344 (346)
T ss_dssp --SEEEEEETTCCSSCC-----TTHHHHHHHHHHTT
T ss_pred --CcEEEEeCCCCCcCH-----HHHHHHHHHHHHHh
Confidence 689999999999986 35678899999864
No 40
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.87 E-value=2e-22 Score=211.95 Aligned_cols=228 Identities=17% Similarity=0.205 Sum_probs=164.6
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..+.++++.|. +.|+||++||++.. ...|...+..|+++||.|+++|+||.+. +..... .......
T Consensus 14 ~g~~l~~~~~~p~------~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~g~---s~~~~~-~~~~~~~ 81 (290)
T 3ksr_A 14 GQDELSGTLLTPT------GMPGVLFVHGWGGS--QHHSLVRAREAVGLGCICMTFDLRGHEG---YASMRQ-SVTRAQN 81 (290)
T ss_dssp TTEEEEEEEEEEE------SEEEEEEECCTTCC--TTTTHHHHHHHHTTTCEEECCCCTTSGG---GGGGTT-TCBHHHH
T ss_pred CCeEEEEEEecCC------CCcEEEEeCCCCCC--cCcHHHHHHHHHHCCCEEEEeecCCCCC---CCCCcc-cccHHHH
Confidence 5789999999985 67999999998765 4567788899999999999999999543 322111 1112234
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCC
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 731 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (826)
.+|+.++++++.+++.+|.++|+|+|||+||++++.++.++| ++++++.+|........ ..+...... ....
T Consensus 82 ~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~---~~~~~~~~~---~~~~ 153 (290)
T 3ksr_A 82 LDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHW---DQPKVSLNA---DPDL 153 (290)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCT---TSBHHHHHH---STTH
T ss_pred HHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhh---hcccccccC---Chhh
Confidence 689999999999887788899999999999999999999887 77888888865422110 000000000 0000
Q ss_pred ccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHH
Q 003363 732 DSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDF 811 (826)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~ 811 (826)
..+..... .....++...+.++++|+|+++|++|..++++++..+++.++..+ +++++++++++|.+.......
T Consensus 154 ~~~~~~~~-----~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~~~~ 227 (290)
T 3ksr_A 154 MDYRRRAL-----APGDNLALAACAQYKGDVLLVEAENDVIVPHPVMRNYADAFTNAR-SLTSRVIAGADHALSVKEHQQ 227 (290)
T ss_dssp HHHTTSCC-----CGGGCHHHHHHHHCCSEEEEEEETTCSSSCHHHHHHHHHHTTTSS-EEEEEEETTCCTTCCSHHHHH
T ss_pred hhhhhhhh-----hhccccHHHHHHhcCCCeEEEEecCCcccChHHHHHHHHHhccCC-CceEEEcCCCCCCCCcchHHH
Confidence 00000000 001122234456788999999999999999999999999998765 789999999999887665666
Q ss_pred HHHHHHHHHHHHHc
Q 003363 812 ESFLNIGLWFKKYC 825 (826)
Q Consensus 812 ~~~~~i~~w~~~~l 825 (826)
++...+.+||++++
T Consensus 228 ~~~~~i~~fl~~~~ 241 (290)
T 3ksr_A 228 EYTRALIDWLTEMV 241 (290)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 88899999999875
No 41
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=7.3e-20 Score=219.25 Aligned_cols=311 Identities=13% Similarity=0.083 Sum_probs=200.8
Q ss_pred eEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecC-Ccc----------e---------ecccE
Q 003363 98 AWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAP-FPV----------E---------MTGAS 157 (826)
Q Consensus 98 ~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~-~~~----------~---------~~~~~ 157 (826)
....+.+||||++|+|..... .+.....||++++.+ ++.++++... ... . ...+.
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d---~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKD---SDRNQLDLWSYDIGS--GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCS---SCTTEEEEEEEETTT--CCEEEEECGGGTC--------------------CCEESC
T ss_pred CCCCceEecCCCEEEEEeccC---CCCcccEEEEEECCC--CceeEccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 345667799999999976421 112345788887633 3444444321 000 0 01267
Q ss_pred EEEeCCCCCeEEEEecCCCCCCeEEEEe-cCC---ceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 158 AVVPSPSGSKLLVVRNPENESPIQFELW-SQS---QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 158 ~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~---~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
.++|||||++|+|... .+++.++ .++ ..++++...... ..++|||||++|||.+.
T Consensus 113 ~~~~SpDg~~l~~~~~-----~~i~~~d~~~~~~~~~~~l~~~~~~~----------~~~~~SPDG~~la~~~~------ 171 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG-----GELYLYDLKQEGKAAVRQLTHGEGFA----------TDAKLSPKGGFVSFIRG------ 171 (741)
T ss_dssp CCEECTTSSEEEEEET-----TEEEEEESSSCSTTSCCBCCCSSSCE----------EEEEECTTSSEEEEEET------
T ss_pred eeEECCCCCEEEEEeC-----CcEEEEECCCCCcceEEEcccCCccc----------ccccCCCCCCEEEEEeC------
Confidence 8999999999999876 2466555 444 444443322222 78999999999999742
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCc-----------------
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLS----------------- 296 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~----------------- 296 (826)
.+|++||+++++.++++ .....
T Consensus 172 ---------------------------------------~~i~~~d~~~g~~~~~~--~~~~~~~~~g~~~~v~~~~~~~ 210 (741)
T 2ecf_A 172 ---------------------------------------RNLWVIDLASGRQMQLT--ADGSTTIGNGIAEFVADEEMDR 210 (741)
T ss_dssp ---------------------------------------TEEEEEETTTTEEEECC--CCCCSSEEESCCCHHHHHHSCC
T ss_pred ---------------------------------------CcEEEEecCCCCEEEec--cCCccceeccccceeeeecccc
Confidence 37999999999988883 22211
Q ss_pred cceEEEeeCCCCCccEEEEEeecCccee--------------eeeeee----ccCCCceEEEEcccccchhhhhhhhcCC
Q 003363 297 VGQVVWAPLNEGLHQYLVFVGWSSETRK--------------LGIKYC----YNRPCALYAVRVSLYKSEASELELKESS 358 (826)
Q Consensus 297 ~~~~~wSPDg~~~~~~lvf~~~~~~~~~--------------~g~~~~----~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 358 (826)
+..++|||||+. |+|.+....... ..+.|. .+....|+++|+
T Consensus 211 ~~~~~~SpDg~~----l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~---------------- 270 (741)
T 2ecf_A 211 HTGYWWAPDDSA----IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP---------------- 270 (741)
T ss_dssp CCSEEECTTSSC----EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS----------------
T ss_pred ccceEECCCCCE----EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC----------------
Confidence 367999999999 999875432110 001110 012237889998
Q ss_pred CCC-CcceecCC---CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccC
Q 003363 359 SED-LPVVNLTE---SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAE 434 (826)
Q Consensus 359 ~~~-~~~~~Lt~---~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 434 (826)
.+ ++.+.+.. +...+..+.| |||++|++.+.... ....+|+++|+.+++.+.+.....
T Consensus 271 -~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~------~~~~~i~~~d~~~g~~~~~~~~~~---------- 332 (741)
T 2ecf_A 271 -AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRD------QKKLDLVEVTLASNQQRVLAHETS---------- 332 (741)
T ss_dssp -STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETT------SSEEEEEEEETTTCCEEEEEEEEC----------
T ss_pred -CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEeccc------CCeEEEEEEECCCCceEEEEEcCC----------
Confidence 66 66666653 3455778999 99999999886532 234689999998866533221110
Q ss_pred CCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeE-EEeecCCEEEEEEeCCCC-C
Q 003363 435 GDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWS-LLTLDGDNIIAVSSSPVD-V 512 (826)
Q Consensus 435 ~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~-~~s~dg~~l~~~~s~~~~-p 512 (826)
.. |......+.|+|||+ +++++..++..+||.+|+.++ .+.|+.....+... .|+++++.+++..+.... .
T Consensus 333 ~~-----~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~ 405 (741)
T 2ecf_A 333 PT-----WVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARE 405 (741)
T ss_dssp SS-----CCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTC
T ss_pred CC-----cCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCce
Confidence 00 111234788999999 767777777889999998777 88888776655444 599999998887764321 3
Q ss_pred CeEEEEee
Q 003363 513 PQVKYGYF 520 (826)
Q Consensus 513 ~~l~~~~~ 520 (826)
..||..++
T Consensus 406 ~~l~~~~~ 413 (741)
T 2ecf_A 406 SQIYAVPL 413 (741)
T ss_dssp BEEEEEET
T ss_pred EEEEEEEc
Confidence 34666554
No 42
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.86 E-value=5.6e-21 Score=208.28 Aligned_cols=247 Identities=13% Similarity=0.083 Sum_probs=166.3
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch-HHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCC
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 645 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~-~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~ 645 (826)
.+...+|..++++++.|.+ .+.++.|+||++||++.. ...+. ..+..|+++||.|+++|+||.+...... ...
T Consensus 72 ~~~~~~g~~~~~~~~~p~~-~~~~~~p~vv~~hG~~~~--~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~---~~~ 145 (367)
T 2hdw_A 72 TFANRYGITLAADLYLPKN-RGGDRLPAIVIGGPFGAV--KEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQP---RNV 145 (367)
T ss_dssp EEECTTSCEEEEEEEEESS-CCSSCEEEEEEECCTTCC--TTSHHHHHHHHHHHTTCEEEEECCTTSTTSCCSS---SSC
T ss_pred EEecCCCCEEEEEEEeCCC-CCCCCCCEEEEECCCCCc--chhhHHHHHHHHHHCCCEEEEECCCCcCCCCCcC---ccc
Confidence 3455568899999999985 235778999999997754 33444 3678899999999999999965432211 111
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc-cCCC--------
Q 003363 646 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-GTTD-------- 716 (826)
Q Consensus 646 ~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~-~~~~-------- 716 (826)
.......+|+.++++++.++..+|.++|+|+|||+||.+++.++.++| .++++|+.+|........ +...
T Consensus 146 ~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~~~~~~~~~~~~~~~~~~~~ 224 (367)
T 2hdw_A 146 ASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYDMTRVMSKGYNDSVTLEQRT 224 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCCHHHHHHHTTTTCCCHHHHH
T ss_pred cchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEeccccccHHHhhhhccccchHHHH
Confidence 112346799999999999987788899999999999999999999988 589999998863211000 0000
Q ss_pred ------------------------CC---C---ch---hhhhccCcC--Ccc---CCCCCChhhHHHHhhcCcccccCCC
Q 003363 717 ------------------------IP---D---WC---YVESYGSKG--KDS---FTESPSVEDLTRFHSKSPISHISKV 758 (826)
Q Consensus 717 ------------------------~~---~---~~---~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~sp~~~~~~i 758 (826)
.+ . .. ....+.... ... ............+...++...+.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 304 (367)
T 2hdw_A 225 RTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPILTYIKEI 304 (367)
T ss_dssp HHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTSCSCTTGGGG
T ss_pred HHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCCChhHhHHhh
Confidence 00 0 00 000000000 000 0000001223445566777888899
Q ss_pred C-CcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 759 K-TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 759 ~-~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
+ +|+|+++|++|. ++.++.+++++ .+.+++++++|+++|..........+.+.+.+||+++|
T Consensus 305 ~~~PvLii~G~~D~--~~~~~~~~~~~---~~~~~~~~~~~g~gH~~~~~~~~~~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 305 SPRPILLIHGERAH--SRYFSETAYAA---AAEPKELLIVPGASHVDLYDRLDRIPFDRIAGFFDEHL 367 (367)
T ss_dssp TTSCEEEEEETTCT--THHHHHHHHHH---SCSSEEEEEETTCCTTHHHHCTTTSCHHHHHHHHHHHC
T ss_pred cCCceEEEecCCCC--CHHHHHHHHHh---CCCCeeEEEeCCCCeeeeecCchhHHHHHHHHHHHhhC
Confidence 9 999999999998 77888777766 56789999999999974322222126789999999886
No 43
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.86 E-value=2.4e-20 Score=185.68 Aligned_cols=195 Identities=13% Similarity=0.153 Sum_probs=148.1
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCC---CCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcC
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP---HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL 643 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~---~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~ 643 (826)
.+...+| .++++++.|. ..++.|+||++||++ .......+...+..|+++||.|+++|+||.+.....
T Consensus 10 ~~~~~~g-~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~----- 80 (208)
T 3trd_A 10 LIQGPVG-QLEVMITRPK---GIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGR----- 80 (208)
T ss_dssp EEECSSS-EEEEEEECCS---SCCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC-----
T ss_pred EEECCCc-eEEEEEEcCC---CCCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCC-----
Confidence 3445567 8999999886 345789999999953 222233466788899999999999999995543221
Q ss_pred CCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhh
Q 003363 644 PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYV 723 (826)
Q Consensus 644 ~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~ 723 (826)
........+|+.++++++.++ .+.++|+++|||+||.+++.++ .+| +++++|+.+|..+. +
T Consensus 81 -~~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~-----------~--- 141 (208)
T 3trd_A 81 -YDNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY-----------E--- 141 (208)
T ss_dssp -CCTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS-----------G---
T ss_pred -ccchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc-----------C---
Confidence 122334589999999999987 4558999999999999999999 667 89999998886510 0
Q ss_pred hhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCC
Q 003363 724 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 803 (826)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~ 803 (826)
....+..+++|+|+++|++|..+|++.+.++++++... ++++++++++|.
T Consensus 142 ---------------------------~~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~~H~ 191 (208)
T 3trd_A 142 ---------------------------GFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSP---VEFVVMSGASHF 191 (208)
T ss_dssp ---------------------------GGTTCCSCCSCEEEEEETTCSSSCHHHHHHHHHHSSSC---CEEEEETTCCSS
T ss_pred ---------------------------CchhhhhcCCCEEEEECCCCCCCCHHHHHHHHHHccCc---eEEEEeCCCCCc
Confidence 01223445799999999999999999998888877653 899999999998
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 003363 804 IERPQSDFESFLNIGLWF 821 (826)
Q Consensus 804 ~~~~~~~~~~~~~i~~w~ 821 (826)
+... ..+..+.+.+||
T Consensus 192 ~~~~--~~~~~~~i~~fl 207 (208)
T 3trd_A 192 FHGR--LIELRELLVRNL 207 (208)
T ss_dssp CTTC--HHHHHHHHHHHH
T ss_pred cccc--HHHHHHHHHHHh
Confidence 8743 246666677666
No 44
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.86 E-value=2e-20 Score=202.74 Aligned_cols=231 Identities=16% Similarity=0.172 Sum_probs=159.0
Q ss_pred eeEEEEEEecCCCC--------------CCCCCcEEEEEcCCCCCCCCc---cchHHHHHHH-HCCcEEEEECCCCCCCC
Q 003363 574 KPFEAIFVSSSHKK--------------DCSCDPLIVVLHGGPHSVSLS---SYSKSLAFLS-SVGYSLLIVNYRGSLGF 635 (826)
Q Consensus 574 ~~l~~~~~~P~~~~--------------~~~~~P~vv~~HGg~~~~~~~---~~~~~~~~la-~~G~~Vl~~d~rG~~g~ 635 (826)
..+.+.+|.|++.. ..++.|+||++|||++..... .|...+..|+ +.||.|+++||||.+++
T Consensus 81 ~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~ 160 (351)
T 2zsh_A 81 INLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPEN 160 (351)
T ss_dssp TTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTSEEEEECCCCTTTS
T ss_pred CCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHcCCEEEEecCCCCCCC
Confidence 34777888887542 246789999999987644332 2667788888 78999999999996543
Q ss_pred chhhhhcCCCCCCcchHHHHHHHHHHHHHcC----CCCCC-cEEEEEecchHHHHHHHHHhCCC---ceeEEEecCCccc
Q 003363 636 GEEALQSLPGKVGSQDVNDVLTAIDHVIDMG----LANPS-KVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLCN 707 (826)
Q Consensus 636 G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~----~~d~~-rv~l~G~S~GG~~a~~~a~~~p~---~~~a~v~~~p~~~ 707 (826)
. ....++|+.++++|+.++. .+|.+ +|+|+|||+||.+++.++.++|+ +++++|+.+|+.+
T Consensus 161 ~-----------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~~~~v~~~vl~~p~~~ 229 (351)
T 2zsh_A 161 P-----------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGIDVLGNILLNPMFG 229 (351)
T ss_dssp C-----------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTTTCCCCEEEEESCCCC
T ss_pred C-----------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhccCCCeeEEEEECCccC
Confidence 1 2245899999999999864 47889 99999999999999999998888 8999999999875
Q ss_pred hhhhccC----CCCC--CchhhhhccCcCCccCCCCCChhhHHHHhhcCcc----cccCCCCC-cEEEEEeCCCCCCCcH
Q 003363 708 LALMVGT----TDIP--DWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPI----SHISKVKT-PTIFLLGAQDLRVPVS 776 (826)
Q Consensus 708 ~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~----~~~~~i~~-PvLii~G~~D~~vp~~ 776 (826)
....... ...+ .......+.. .+...... ......+|. ..+.++++ |+|+++|++|..++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~l~~i~~pP~Lii~G~~D~~~~-- 300 (351)
T 2zsh_A 230 GNERTESEKSLDGKYFVTVRDRDWYWK----AFLPEGED---REHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRD-- 300 (351)
T ss_dssp CSSCCHHHHHHTTTSSCCHHHHHHHHH----HHSCTTCC---TTSTTTCTTSTTSCCCTTCCCCEEEEEEETTSTTHH--
T ss_pred CCcCChhhhhcCCCcccCHHHHHHHHH----HhCCCCCC---CCCcccCCCCCCccchhhCCCCCEEEEEcCCCcchH--
Confidence 3211000 0000 0000000000 00000000 000011221 33455565 99999999999875
Q ss_pred HHHHHHHHHHhCCCCEEEEEeCCCCCCCCC---CCCHHHHHHHHHHHHHHH
Q 003363 777 NGLQYARALREKGVETKVIVFPNDVHGIER---PQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 777 ~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~---~~~~~~~~~~i~~w~~~~ 824 (826)
++..++++|++.|.+++++++++++|.+.. .+...++++.+.+||+++
T Consensus 301 ~~~~~~~~l~~~g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl~~~ 351 (351)
T 2zsh_A 301 WQLAYAEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVNAE 351 (351)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHcCCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 678899999999999999999999998865 244557888999999764
No 45
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.86 E-value=1.8e-21 Score=225.60 Aligned_cols=254 Identities=14% Similarity=0.160 Sum_probs=173.5
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-----CCccchH-HH---HHHHHCCcEEEEECCCCCCCCch
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-----SLSSYSK-SL---AFLSSVGYSLLIVNYRGSLGFGE 637 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-----~~~~~~~-~~---~~la~~G~~Vl~~d~rG~~g~G~ 637 (826)
.+...||..++++++.|++ .+++|+||++||..... ....|.. .. ++|+++||+|+.+|+||+++++.
T Consensus 29 ~i~~~DG~~L~~~~~~P~~---~~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D~RG~g~S~g 105 (615)
T 1mpx_A 29 MIPMRDGVKLHTVIVLPKG---AKNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQDVRGKYGSEG 105 (615)
T ss_dssp EEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCCS
T ss_pred EEECCCCCEEEEEEEeCCC---CCCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEECCCCCCCCCC
Confidence 4456678999999999974 36789999999844321 1112222 22 78999999999999999888776
Q ss_pred hhhhcCC-----CCCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccch-h-
Q 003363 638 EALQSLP-----GKVGSQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL-A- 709 (826)
Q Consensus 638 ~~~~~~~-----~~~~~~~~~D~~~~i~~l~~~-~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~-~- 709 (826)
.+....+ ..++..+.+|+.++++||.++ +..| .||+++|+||||++++.+++.+|+.++++|+.+|+.++ .
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~~~~~d~~~~ 184 (615)
T 1mpx_A 106 DYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVPESPMIDGWMG 184 (615)
T ss_dssp CCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEEESCCCCTTTT
T ss_pred ccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEecCCccccccc
Confidence 5432211 112226899999999999998 7666 59999999999999999998889999999999999884 2
Q ss_pred hhc---cCCCCC--CchhhhhccCcC--------Cc----------------cC-C-CCCChh-------hHHHHhhcCc
Q 003363 710 LMV---GTTDIP--DWCYVESYGSKG--------KD----------------SF-T-ESPSVE-------DLTRFHSKSP 751 (826)
Q Consensus 710 ~~~---~~~~~~--~~~~~~~~~~~~--------~~----------------~~-~-~~~~~~-------~~~~~~~~sp 751 (826)
... +..... .|.+........ .. .+ . ..+.++ ..+.|...||
T Consensus 185 ~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~w~~~Sp 264 (615)
T 1mpx_A 185 DDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAYDAFWQEQAL 264 (615)
T ss_dssp SSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSSCHHHHTTCH
T ss_pred cccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCcChhhhhcCh
Confidence 111 000000 011000000000 00 00 0 000000 1134567799
Q ss_pred ccccCC--CCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCC---EEEEEeCCCCCCCCC------------CCCH-HHH
Q 003363 752 ISHISK--VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE---TKVIVFPNDVHGIER------------PQSD-FES 813 (826)
Q Consensus 752 ~~~~~~--i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~---~~~~~~p~~~H~~~~------------~~~~-~~~ 813 (826)
+.++++ |++|+|++||..|.+ +..++.+++++|+++|++ .++++.|. +|+... .+.. ...
T Consensus 265 ~~~~~~~~I~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~g~p~~~~~lvigp~-~H~~~~~~~~~~~~~~f~~~~~~~~~ 342 (615)
T 1mpx_A 265 DKVMARTPLKVPTMWLQGLWDQE-DMWGAIHSYAAMEPRDKRNTLNYLVMGPW-RHSQVNYDGSALGALNFEGDTARQFR 342 (615)
T ss_dssp HHHHHTSCCCSCEEEEEETTCSS-CSSHHHHHHHHHGGGCTTSSSEEEEEESC-CTTGGGSCCSEETTEECSSCHHHHHH
T ss_pred hhhhhccCCCCCEEEeecccCcc-ccccHHHHHHHHHhhcCCCcCCEEEECCC-CCCCccccccccCccccCcccchhhh
Confidence 999999 999999999999998 889999999999998753 89999988 687511 1111 122
Q ss_pred HHHHHHHHHHHcC
Q 003363 814 FLNIGLWFKKYCK 826 (826)
Q Consensus 814 ~~~i~~w~~~~l~ 826 (826)
.+.+++||++|||
T Consensus 343 ~~~~~~wfd~~Lk 355 (615)
T 1mpx_A 343 HDVLRPFFDQYLV 355 (615)
T ss_dssp HHTHHHHHHHHHS
T ss_pred hhHHHHHHHHHhc
Confidence 5778999999986
No 46
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.85 E-value=1.1e-20 Score=207.87 Aligned_cols=313 Identities=13% Similarity=0.133 Sum_probs=202.3
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (826)
.+.+||||++|+|..... ....+|++++ .+++.++++.... .....+.|||||++|+|++... +
T Consensus 40 ~~~~SpdG~~l~~~~~~~------g~~~l~~~d~--~~~~~~~l~~~~~----~~~~~~~~spdg~~l~~~~~~~----~ 103 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDFD------GNRNYYLLNL--ETQQAVQLTEGKG----DNTFGGFISTDERAFFYVKNEL----N 103 (396)
T ss_dssp SCCBCTTSCEEEEEECTT------SSCEEEEEET--TTTEEEECCCSSC----BCTTTCEECTTSSEEEEEETTT----E
T ss_pred cCcCCCCCCEEEEEEecC------CCceEEEEEC--CCCcEEEeecCCC----CccccceECCCCCEEEEEEcCC----c
Confidence 356799999999986542 3456787765 3445566654431 1123378999999999998754 5
Q ss_pred EEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCccee
Q 003363 181 QFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (826)
Q Consensus 181 ~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (826)
++.+. .+++.++++... .. |+|||++|+|.+...... .+.....|
T Consensus 104 l~~~d~~~~~~~~~~~~~-------------~~--~~~~g~~l~~~~~~~~~~-------------------~~~~~~~~ 149 (396)
T 3c5m_A 104 LMKVDLETLEEQVIYTVD-------------EE--WKGYGTWVANSDCTKLVG-------------------IEILKRDW 149 (396)
T ss_dssp EEEEETTTCCEEEEEECC-------------TT--EEEEEEEEECTTSSEEEE-------------------EEEEGGGC
T ss_pred EEEEECCCCCcEEEEecc-------------cc--cCCCCCEEEeccCCcccc-------------------cccccccc
Confidence 77776 556666655432 12 888888888864332100 00001122
Q ss_pred ecCCCccCC-----CccCceEEEEEccCCceEeccCCCCCCccceEEEee-CCCCCccEEEEEeecCcceeeeeeeeccC
Q 003363 260 EEDWGETYA-----GKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNR 333 (826)
Q Consensus 260 ~~d~g~~~~-----~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSP-Dg~~~~~~lvf~~~~~~~~~~g~~~~~~~ 333 (826)
+++...... ......|+++|+++++.+.+ ......+..+.||| ||+. |+|.+.... ...
T Consensus 150 spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~--~~~~~~~~~~~~sp~dg~~----l~~~~~~~~---------~~~ 214 (396)
T 3c5m_A 150 QPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVI--HQDTAWLGHPIYRPFDDST----VGFCHEGPH---------DLV 214 (396)
T ss_dssp CCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEE--EEESSCEEEEEEETTEEEE----EEEEECSCS---------SSC
T ss_pred CCCCcceeeeeeccCCCcceEEEEECCCCcEEee--ccCCcccccceECCCCCCE----EEEEecCCC---------CCC
Confidence 232111100 12457899999999998888 34445677899999 8998 999873111 112
Q ss_pred CCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCC--ccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeC
Q 003363 334 PCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESI--SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 411 (826)
Q Consensus 334 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~--~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~ 411 (826)
...||.+|+ +++..+.++... ..+..+.|||||++|+|.+.+.. .....|+++|+
T Consensus 215 ~~~l~~~d~-----------------~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~~~l~~~d~ 271 (396)
T 3c5m_A 215 DARMWLVNE-----------------DGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKG------QTDRVIYKANP 271 (396)
T ss_dssp SCCCEEEET-----------------TSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETT------TCCEEEEEECT
T ss_pred CceEEEEEC-----------------CCCceeEeeccCCCccccceEECCCCCEEEEEecCCC------CccceEEEEEC
Confidence 257999998 677777777642 24677899999999999987641 11234999999
Q ss_pred CCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCcccc-CCCEEEEEEE-------------eCCeEEEEEEECCC
Q 003363 412 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSI-------------WGSSQVIISVNVSS 477 (826)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~-Dg~~l~~~~~-------------~~~~~~l~~vdl~t 477 (826)
.+++...+.. +++ . .+.|+| ||+.|++... ..+...||.+|+.+
T Consensus 272 ~~g~~~~l~~----------------~~~-----~-~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~ 329 (396)
T 3c5m_A 272 ETLENEEVMV----------------MPP-----C-SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKA 329 (396)
T ss_dssp TTCCEEEEEE----------------CCS-----E-EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTT
T ss_pred CCCCeEEeee----------------CCC-----C-CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEeccc
Confidence 8765432211 011 1 167999 9997665432 12457899999999
Q ss_pred CcEEEecCCCCC-----------eeeEEEeecCCEEEEEEeCCCCCCeEEEEeecccC
Q 003363 478 GELLRITPAESN-----------FSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDKA 524 (826)
Q Consensus 478 g~~~~lt~~~~~-----------~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~~ 524 (826)
++.++|+..... .....|++||+.|++..... ..++||++++.++.
T Consensus 330 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~-~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 330 KSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE-GVPAIYIADVPESY 386 (396)
T ss_dssp TBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT-SSCEEEEEECCTTC
T ss_pred CceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC-CCceEEEEEEcccc
Confidence 998888765431 23457899999988887654 45679998876543
No 47
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.85 E-value=2.7e-20 Score=200.64 Aligned_cols=245 Identities=16% Similarity=0.163 Sum_probs=165.7
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCC
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 646 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~ 646 (826)
.+...+|..+.+.++.|. +.+.|+||++||++.. ...|...+..|+++||.|+++|+||.+..... .....
T Consensus 39 ~~~~~dg~~l~~~~~~p~----~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~---~~~~~ 109 (342)
T 3hju_A 39 HLVNADGQYLFCRYWKPT----GTPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVGHGQSEGE---RMVVS 109 (342)
T ss_dssp EEECTTSCEEEEEEECCS----SCCSEEEEEECCTTCC--GGGGHHHHHHHHTTTEEEEEECCTTSTTSCSS---TTCCS
T ss_pred eEEccCCeEEEEEEeCCC----CCCCcEEEEECCCCcc--cchHHHHHHHHHhCCCeEEEEcCCCCcCCCCc---CCCcC
Confidence 345667889999999885 3567999999997755 45788889999999999999999995443221 11111
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCc--hhhh
Q 003363 647 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW--CYVE 724 (826)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~--~~~~ 724 (826)
.....++|+.++++++... .+.++|+|+|||+||.+++.++.++|++++++|+.+|........... .... ....
T Consensus 110 ~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~ 186 (342)
T 3hju_A 110 DFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATT-FKVLAAKVLN 186 (342)
T ss_dssp CTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSH-HHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhH-HHHHHHHHHH
Confidence 2223478999999999887 456799999999999999999999999999999999976532110000 0000 0000
Q ss_pred hccC----cCCccCCCCCChhhHHHHh---------------------hcCcccccCCCCCcEEEEEeCCCCCCCcHHHH
Q 003363 725 SYGS----KGKDSFTESPSVEDLTRFH---------------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGL 779 (826)
Q Consensus 725 ~~~~----~~~~~~~~~~~~~~~~~~~---------------------~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~ 779 (826)
.+.. .................+. ..+....+.++++|+|+++|++|..+|++.+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~ 266 (342)
T 3hju_A 187 LVLPNLSLGPIDSSVLSRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAY 266 (342)
T ss_dssp HHCTTCBCCCCCGGGSCSCHHHHHHHHTCTTCCCSCCBHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred HhccccccCcccccccccchHHHHHHhcCcccccccccHHHHHHHHHHHHHHHHHHHhCCcCEEEEEeCCCcccChHHHH
Confidence 0000 0000000000011111110 01112456788999999999999999999999
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHHHHc
Q 003363 780 QYARALREKGVETKVIVFPNDVHGIERPQS--DFESFLNIGLWFKKYC 825 (826)
Q Consensus 780 ~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~--~~~~~~~i~~w~~~~l 825 (826)
.+++.+.. ..+++++++++||.+..... ..+.+..+++||++++
T Consensus 267 ~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (342)
T 3hju_A 267 LLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 312 (342)
T ss_dssp HHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCC--CCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhccc
Confidence 99888763 25899999999998765433 4467788999999875
No 48
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.85 E-value=5e-20 Score=193.86 Aligned_cols=240 Identities=15% Similarity=0.201 Sum_probs=164.0
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCC
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK 646 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~ 646 (826)
.+...+|..++++++.|. +++.|+||++||.+.. ...|...+..|+++||.|+++|+||.+..... .....
T Consensus 21 ~~~~~~g~~l~~~~~~~~----~~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~---~~~~~ 91 (303)
T 3pe6_A 21 HLVNADGQYLFCRYWAPT----GTPKALIFVSHGAGEH--SGRYEELARMLMGLDLLVFAHDHVGHGQSEGE---RMVVS 91 (303)
T ss_dssp EEECTTSCEEEEEEECCS----SCCSEEEEEECCTTCC--GGGGHHHHHHHHHTTEEEEEECCTTSTTSCSS---TTCCS
T ss_pred eEecCCCeEEEEEEeccC----CCCCeEEEEECCCCch--hhHHHHHHHHHHhCCCcEEEeCCCCCCCCCCC---CCCCC
Confidence 345667889999999875 3567999999997655 45788889999999999999999995543221 11111
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhcc-----------CC
Q 003363 647 VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-----------TT 715 (826)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~-----------~~ 715 (826)
.....++|+.++++++... .+.+++.|+|||+||.+++.++.++|++++++|+.+|......... ..
T Consensus 92 ~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (303)
T 3pe6_A 92 DFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNS 169 (303)
T ss_dssp STHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHHHH
Confidence 1223478889999988877 3457899999999999999999999999999999999764321100 00
Q ss_pred CCCCchhhhhccCcCCccCCCCCChhhHHHHh---------------------hcCcccccCCCCCcEEEEEeCCCCCCC
Q 003363 716 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFH---------------------SKSPISHISKVKTPTIFLLGAQDLRVP 774 (826)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~sp~~~~~~i~~PvLii~G~~D~~vp 774 (826)
..+.... .. ...... .........+. .......+.++++|+|+++|++|..++
T Consensus 170 ~~~~~~~----~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~ 243 (303)
T 3pe6_A 170 VLPNLSS----GP-IDSSVL-SRNKTEVDIYNSDPLICRAGLKVCFGIQLLNAVSRVERALPKLTVPFLLLQGSADRLCD 243 (303)
T ss_dssp TCCSCCC----CC-CCGGGT-CSCHHHHHHHHTCTTSCCSCCCHHHHHHHHHHHHHHHHHGGGCCSCEEEEEETTCSSBC
T ss_pred hcccccC----Cc-cchhhh-hcchhHHHHhccCccccccchhhhhHHHHHHHHHHHHHHhhcCCCCEEEEeeCCCCCCC
Confidence 0000000 00 000000 00001111110 001124567889999999999999999
Q ss_pred cHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHHHHc
Q 003363 775 VSNGLQYARALREKGVETKVIVFPNDVHGIERPQS--DFESFLNIGLWFKKYC 825 (826)
Q Consensus 775 ~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~--~~~~~~~i~~w~~~~l 825 (826)
++.+..+++.+.. ..+++++++++||.+..... ..+....+++||++++
T Consensus 244 ~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~ 294 (303)
T 3pe6_A 244 SKGAYLLMELAKS--QDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 294 (303)
T ss_dssp HHHHHHHHHHCCC--SSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHhccc--CCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccC
Confidence 9999999888753 25899999999998765433 4467788999999876
No 49
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.85 E-value=3.1e-21 Score=201.95 Aligned_cols=231 Identities=14% Similarity=0.121 Sum_probs=154.7
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHH---HHHHHHCCcEEEEECC--CCCCCCchhh-----
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS---LAFLSSVGYSLLIVNY--RGSLGFGEEA----- 639 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~---~~~la~~G~~Vl~~d~--rG~~g~G~~~----- 639 (826)
...|.++...+|.|++++ .+++|+||++||++... ..+... .+.++++||.|+++|+ ||.++.|...
T Consensus 24 ~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~~~~~~g 100 (282)
T 3fcx_A 24 VELNCKMKFAVYLPPKAE-TGKCPALYWLSGLTCTE--QNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFG 100 (282)
T ss_dssp TTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC--------CC
T ss_pred hhcCCeeEEEEEcCCCCC-CCCCCEEEEEcCCCCCc--cchhhcchHHHHhhcCCeEEEEeccccCcccccccccccccc
Confidence 345778999999998643 36899999999987653 344333 5778899999999999 8876544321
Q ss_pred -----hhcCCC-CCC--cchHHHHH-HHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh
Q 003363 640 -----LQSLPG-KVG--SQDVNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 710 (826)
Q Consensus 640 -----~~~~~~-~~~--~~~~~D~~-~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~ 710 (826)
....+. .+. .....++. ++++++.+...+|++||+|+|+|+||++++.++.++|++|+++++.+|+.+...
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~ 180 (282)
T 3fcx_A 101 TGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVL 180 (282)
T ss_dssp CCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESCCCCGGG
T ss_pred CCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCCccCccc
Confidence 000000 000 01123333 445555545558889999999999999999999999999999999999876432
Q ss_pred hccCCCCCCch---hhhhccCcCCccCCCCCChhhHHHHhhcCccccc---CCCCCcEEEEEeCCCCCCCcHH--HHHHH
Q 003363 711 MVGTTDIPDWC---YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHI---SKVKTPTIFLLGAQDLRVPVSN--GLQYA 782 (826)
Q Consensus 711 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~---~~i~~PvLii~G~~D~~vp~~~--~~~~~ 782 (826)
. .|. +...++. ....+...+|...+ ..+++|+|++||+.|..+|..+ +++++
T Consensus 181 ~-------~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~ 240 (282)
T 3fcx_A 181 C-------PWGKKAFSGYLGT-------------DQSKWKAYDATHLVKSYPGSQLDILIDQGKDDQFLLDGQLLPDNFI 240 (282)
T ss_dssp S-------HHHHHHHHHHHC----------------CCGGGGCHHHHHTTCC---CCEEEEEETTCHHHHTTSSCHHHHH
T ss_pred C-------chhHHHHHHhcCC-------------chhhhhhcCHHHHHHhcccCCCcEEEEcCCCCcccccchhhHHHHH
Confidence 1 111 0000110 00112233444333 3447999999999999986655 56899
Q ss_pred HHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 783 RALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 783 ~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
++|++.|++++++++|+++|.+.. ........+.|+.++|+
T Consensus 241 ~~l~~~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 241 AACTEKKIPVVFRLQEDYDHSYYF---IATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHTTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCceEEEECCCCCcCHHH---HHhhhHHHHHHHHHhhc
Confidence 999999999999999999998742 23456778889988875
No 50
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.85 E-value=1.1e-20 Score=219.70 Aligned_cols=254 Identities=14% Similarity=0.188 Sum_probs=174.3
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCC-----CC-CccchHH---H-HHHHHCCcEEEEECCCCCCCCc
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-----VS-LSSYSKS---L-AFLSSVGYSLLIVNYRGSLGFG 636 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~-----~~-~~~~~~~---~-~~la~~G~~Vl~~d~rG~~g~G 636 (826)
.+...||..|++++|.|++ .+++|+||++||.... .. ...|... . ++|+++||+|+.+|+||+++++
T Consensus 41 ~i~~~DG~~L~~~l~~P~~---~~~~PvIl~~hpyg~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~D~RG~g~S~ 117 (652)
T 2b9v_A 41 MVPMRDGVKLYTVIVIPKN---ARNAPILLTRTPYNAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQDIRGKYGSQ 117 (652)
T ss_dssp EEECTTSCEEEEEEEEETT---CCSEEEEEEEESSCHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEEECTTSTTCC
T ss_pred EEECCCCcEEEEEEEecCC---CCCccEEEEECCCCCCcccccccccccccccccchHHHHHhCCCEEEEEecCcCCCCC
Confidence 3445678899999999984 3678999999973321 01 1112111 2 8899999999999999998887
Q ss_pred hhhhhcCC--CCCC---cchHHHHHHHHHHHHHc-CCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh
Q 003363 637 EEALQSLP--GKVG---SQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 710 (826)
Q Consensus 637 ~~~~~~~~--~~~~---~~~~~D~~~~i~~l~~~-~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~ 710 (826)
..+....+ ..++ ..+.+|+.++++||.++ +..| .||+|+|+||||++++.+++++|+.++++|+.+|+.++..
T Consensus 118 g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~~~~~~d~~~ 196 (652)
T 2b9v_A 118 GDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAPESPMVDGWM 196 (652)
T ss_dssp SCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEEEEECCCTTT
T ss_pred CcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEeccccccccc
Confidence 76533211 1122 36899999999999998 7777 5999999999999999999888999999999999988532
Q ss_pred --hc---cCCCCC--CchhhhhccCcCC--------ccC------------------CCCCChh-------hHHHHhhcC
Q 003363 711 --MV---GTTDIP--DWCYVESYGSKGK--------DSF------------------TESPSVE-------DLTRFHSKS 750 (826)
Q Consensus 711 --~~---~~~~~~--~~~~~~~~~~~~~--------~~~------------------~~~~~~~-------~~~~~~~~s 750 (826)
.. +..... .|........... ..+ ...+.++ ..+.|...+
T Consensus 197 ~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~d~yw~~~S 276 (652)
T 2b9v_A 197 GDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPAYDAFWQGQA 276 (652)
T ss_dssp BSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCSSSHHHHTTC
T ss_pred ccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCCCChHHhcCC
Confidence 10 110110 1110000000000 000 0000000 012345678
Q ss_pred cccccCC--CCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCC--CCEEEEEeCCCCCCCCC-----C------CC--HHHH
Q 003363 751 PISHISK--VKTPTIFLLGAQDLRVPVSNGLQYARALREKG--VETKVIVFPNDVHGIER-----P------QS--DFES 813 (826)
Q Consensus 751 p~~~~~~--i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g--~~~~~~~~p~~~H~~~~-----~------~~--~~~~ 813 (826)
|..++++ |++|+|++||..|.+ +..++.+++++|++++ ++.++++.|+ +|+... . .. ....
T Consensus 277 p~~~~~~~~I~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~g~~~~~~lvigp~-~H~~~~~~~~~~~~~~f~~~~~~~~~ 354 (652)
T 2b9v_A 277 LDKILAQRKPTVPMLWEQGLWDQE-DMWGAIHAWQALKDADVKAPNTLVMGPW-RHSGVNYNGSTLGPLEFEGDTAHQYR 354 (652)
T ss_dssp HHHHHHHHCCCSCEEEEEETTCSS-CSSHHHHHHHHHHHTTCSSCEEEEEESC-CTTGGGSCCSEETTEECSSCHHHHHH
T ss_pred hhhhhhcCCCCCCEEEEeecCCcc-ccccHHHHHHHHHhcCCCCCCEEEECCC-CCCCcccccccCCccccccccchhhh
Confidence 8889999 999999999999997 6789999999999998 8899999887 697521 1 11 1233
Q ss_pred HHHHHHHHHHHcC
Q 003363 814 FLNIGLWFKKYCK 826 (826)
Q Consensus 814 ~~~i~~w~~~~l~ 826 (826)
.+.+++||++|||
T Consensus 355 ~~~~~~wfd~~Lk 367 (652)
T 2b9v_A 355 RDVFRPFFDEYLK 367 (652)
T ss_dssp HHTHHHHHHHHHS
T ss_pred hhHHHHHHHHHhC
Confidence 6788999999986
No 51
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.85 E-value=1.5e-20 Score=199.53 Aligned_cols=185 Identities=16% Similarity=0.189 Sum_probs=151.6
Q ss_pred EEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHH
Q 003363 578 AIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLT 657 (826)
Q Consensus 578 ~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~ 657 (826)
+.+|.|.. ..+.|+||++||++.. ...|...+..|+++||.|+++|+||.+.... ...+|+.+
T Consensus 85 ~~~~~p~~---~~~~p~vv~~HG~~~~--~~~~~~~~~~la~~G~~vv~~d~~g~g~s~~------------~~~~d~~~ 147 (306)
T 3vis_A 85 GTIYYPRE---NNTYGAIAISPGYTGT--QSSIAWLGERIASHGFVVIAIDTNTTLDQPD------------SRARQLNA 147 (306)
T ss_dssp EEEEEESS---CSCEEEEEEECCTTCC--HHHHHHHHHHHHTTTEEEEEECCSSTTCCHH------------HHHHHHHH
T ss_pred eEEEeeCC---CCCCCEEEEeCCCcCC--HHHHHHHHHHHHhCCCEEEEecCCCCCCCcc------------hHHHHHHH
Confidence 46777863 3378999999997654 4467778889999999999999999544321 23578899
Q ss_pred HHHHHHHc------CCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCC
Q 003363 658 AIDHVIDM------GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 731 (826)
Q Consensus 658 ~i~~l~~~------~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (826)
+++++.+. ..+|.++|+|+|||+||.+++.++.++|+ ++++|+.+|...
T Consensus 148 ~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~------------------------ 202 (306)
T 3vis_A 148 ALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL------------------------ 202 (306)
T ss_dssp HHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS------------------------
T ss_pred HHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC------------------------
Confidence 99999887 66888999999999999999999999987 889988877432
Q ss_pred ccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcH-HHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCH
Q 003363 732 DSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVS-NGLQYARALREKGVETKVIVFPNDVHGIERPQSD 810 (826)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~-~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~ 810 (826)
...+.++++|+|+++|++|..+|++ +.+.+++.++..+ +++++++++++|.+.....
T Consensus 203 --------------------~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~~-~~~~~~~~g~gH~~~~~~~- 260 (306)
T 3vis_A 203 --------------------NKSWRDITVPTLIIGAEYDTIASVTLHSKPFYNSIPSPT-DKAYLELDGASHFAPNITN- 260 (306)
T ss_dssp --------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHTCCTTS-CEEEEEETTCCTTGGGSCC-
T ss_pred --------------------ccccccCCCCEEEEecCCCcccCcchhHHHHHHHhccCC-CceEEEECCCCccchhhch-
Confidence 1234567899999999999999998 6999999998766 8999999999998865554
Q ss_pred HHHHHHHHHHHHHHcC
Q 003363 811 FESFLNIGLWFKKYCK 826 (826)
Q Consensus 811 ~~~~~~i~~w~~~~l~ 826 (826)
.++...+.+||+++++
T Consensus 261 ~~~~~~i~~fl~~~l~ 276 (306)
T 3vis_A 261 KTIGMYSVAWLKRFVD 276 (306)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHcc
Confidence 4788999999999874
No 52
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.85 E-value=2.7e-20 Score=192.74 Aligned_cols=188 Identities=15% Similarity=0.151 Sum_probs=150.7
Q ss_pred EEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHH
Q 003363 577 EAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVL 656 (826)
Q Consensus 577 ~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~ 656 (826)
.+.++.|... +.++.|+||++||++.. ...|...+..|+++||.|+++|+||.+.... ....|+.
T Consensus 40 ~~~l~~p~~~-~~~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~~------------~~~~d~~ 104 (262)
T 1jfr_A 40 GGTIYYPTST-ADGTFGAVVISPGFTAY--QSSIAWLGPRLASQGFVVFTIDTNTTLDQPD------------SRGRQLL 104 (262)
T ss_dssp CEEEEEESCC-TTCCEEEEEEECCTTCC--GGGTTTHHHHHHTTTCEEEEECCSSTTCCHH------------HHHHHHH
T ss_pred ceeEEecCCC-CCCCCCEEEEeCCcCCC--chhHHHHHHHHHhCCCEEEEeCCCCCCCCCc------------hhHHHHH
Confidence 3567777642 35678999999997654 4467778889999999999999999543211 2357888
Q ss_pred HHHHHHHH----cCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCc
Q 003363 657 TAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKD 732 (826)
Q Consensus 657 ~~i~~l~~----~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (826)
++++++.+ ...++.++|+|+|||+||.+++.++.++|+ ++++|+.+|...
T Consensus 105 ~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~------------------------- 158 (262)
T 1jfr_A 105 SALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT------------------------- 158 (262)
T ss_dssp HHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS-------------------------
T ss_pred HHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc-------------------------
Confidence 89999987 344677899999999999999999999988 899998877421
Q ss_pred cCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHH-HHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHH
Q 003363 733 SFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVETKVIVFPNDVHGIERPQSDF 811 (826)
Q Consensus 733 ~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~ 811 (826)
...+.++++|+|+++|++|..++++. ++++++.++. +.+++++++++++|.+..... .
T Consensus 159 -------------------~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~H~~~~~~~-~ 217 (262)
T 1jfr_A 159 -------------------DKTWPELRTPTLVVGADGDTVAPVATHSKPFYESLPG-SLDKAYLELRGASHFTPNTSD-T 217 (262)
T ss_dssp -------------------CCCCTTCCSCEEEEEETTCSSSCTTTTHHHHHHHSCT-TSCEEEEEETTCCTTGGGSCC-H
T ss_pred -------------------cccccccCCCEEEEecCccccCCchhhHHHHHHHhhc-CCCceEEEeCCCCcCCcccch-H
Confidence 12345678999999999999999998 9999999853 567899999999998875544 4
Q ss_pred HHHHHHHHHHHHHcC
Q 003363 812 ESFLNIGLWFKKYCK 826 (826)
Q Consensus 812 ~~~~~i~~w~~~~l~ 826 (826)
++...+.+||+++++
T Consensus 218 ~~~~~i~~fl~~~l~ 232 (262)
T 1jfr_A 218 TIAKYSISWLKRFID 232 (262)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhc
Confidence 789999999999874
No 53
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.85 E-value=5.8e-21 Score=199.82 Aligned_cols=231 Identities=12% Similarity=0.087 Sum_probs=158.3
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH---HHHHHHHCCcEEEEECCCCCCC-----------C
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLG-----------F 635 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~Vl~~d~rG~~g-----------~ 635 (826)
...|.++...+|.|++++..+++|+||++||++... ..|.. ..+.+++.||.|+++|.++.+. .
T Consensus 25 ~~~g~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~~~~~~~G~ 102 (280)
T 3i6y_A 25 NTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSD--ENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVADDEGYDLGQ 102 (280)
T ss_dssp TTTTEEEEEEEEECGGGGTTCCEEEEEEECCTTCCS--SHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCCCSSTTSST
T ss_pred cccCCeeEEEEEeCCCCCCCCCccEEEEecCCCCCh--hHHhhcccHHHHHhhCCeEEEEeCCcccccccCccccccccc
Confidence 346788999999999766678899999999987653 33433 3456678899999999875321 1
Q ss_pred chhhhhcCCC-CCC-cch-HHHH-HHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhh
Q 003363 636 GEEALQSLPG-KVG-SQD-VNDV-LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 711 (826)
Q Consensus 636 G~~~~~~~~~-~~~-~~~-~~D~-~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~ 711 (826)
|..+...... .+. ... ...+ .+.++++.+...+ ++||+|+|||+||++++.++.++|++|+++++.+|+++....
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~~ 181 (280)
T 3i6y_A 103 GAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFSPINNPVNC 181 (280)
T ss_dssp TCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCCCGGGS
T ss_pred CccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeCCccccccC
Confidence 1111100000 000 001 2222 2444555455434 589999999999999999999999999999999998765321
Q ss_pred ccCCCCCCch---hhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCC--CcEEEEEeCCCCCCCcHH-HHHHHHHH
Q 003363 712 VGTTDIPDWC---YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSN-GLQYARAL 785 (826)
Q Consensus 712 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~PvLii~G~~D~~vp~~~-~~~~~~~l 785 (826)
. |. +...++. ....+...+|...+.+++ +|+|++||+.|.+++.+. +++++++|
T Consensus 182 ~-------~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~P~li~~G~~D~~v~~~~~~~~~~~~l 241 (280)
T 3i6y_A 182 P-------WGQKAFTAYLGK-------------DTDTWREYDASLLMRAAKQYVPALVDQGEADNFLAEQLKPEVLEAAA 241 (280)
T ss_dssp H-------HHHHHHHHHHCS-------------CGGGTGGGCHHHHHHHCSSCCCEEEEEETTCTTHHHHTCHHHHHHHH
T ss_pred c-------hHHHHHHHhcCC-------------chHHHHhcCHHHHHHhcCCCccEEEEEeCCCccccchhhHHHHHHHH
Confidence 0 10 0011111 011233455555555554 899999999999998755 88999999
Q ss_pred HhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 786 REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 786 ~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
++.|++++++++|+++|.+. .......++++|+.++|+
T Consensus 242 ~~~g~~~~~~~~~g~~H~~~---~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 242 SSNNYPLELRSHEGYDHSYY---FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHTTCCEEEEEETTCCSSHH---HHHHHHHHHHHHHHHHHT
T ss_pred HHcCCCceEEEeCCCCccHH---HHHHhHHHHHHHHHhhcc
Confidence 99999999999999999863 123567889999999875
No 54
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.85 E-value=1.2e-19 Score=188.12 Aligned_cols=233 Identities=12% Similarity=0.181 Sum_probs=157.5
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-Cccch-HHHHHHHHCCcEEEEECCCCCCCCchhhhhcCC
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 644 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-~~~~~-~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~ 644 (826)
.+...+|..+++.++.|. ..++.|+||++||+++... ...+. .....|++. |.|+++|+||++...
T Consensus 7 ~~~~~dg~~l~~~~~~p~---~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~-------- 74 (275)
T 3h04_A 7 KVITKDAFALPYTIIKAK---NQPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVS-------- 74 (275)
T ss_dssp EEECTTSCEEEEEEECCS---SSSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSC--------
T ss_pred EEecCCcEEEEEEEEccC---CCCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCccc--------
Confidence 344567888999999987 4557899999999873222 23333 566677776 999999999864321
Q ss_pred CCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCch---
Q 003363 645 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC--- 721 (826)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~--- 721 (826)
.....+|+.++++++.+. ++.++++|+|||+||.+++.++.+ ++++++|+.+|..+......... ..+.
T Consensus 75 ---~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~-~~~~~~~ 146 (275)
T 3h04_A 75 ---LDCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTT-NSYYAKI 146 (275)
T ss_dssp ---HHHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSC-CHHHHHH
T ss_pred ---cchhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccc-cchhhcc
Confidence 123578999999999987 667899999999999999999998 78999999999876521110000 0000
Q ss_pred -------hhhhccCcCCccCCCCCChhhHHHH------------hh--------cC-cccccCCCCCcEEEEEeCCCCCC
Q 003363 722 -------YVESYGSKGKDSFTESPSVEDLTRF------------HS--------KS-PISHISKVKTPTIFLLGAQDLRV 773 (826)
Q Consensus 722 -------~~~~~~~~~~~~~~~~~~~~~~~~~------------~~--------~s-p~~~~~~i~~PvLii~G~~D~~v 773 (826)
....+.. ...............+ .. .. ....+.++. |+|+++|++|..+
T Consensus 147 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~lii~G~~D~~~ 223 (275)
T 3h04_A 147 AQSINETMIAQLTS--PTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKTLP-PVFIAHCNGDYDV 223 (275)
T ss_dssp HTTSCHHHHHTTSC--SSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTTCC-CEEEEEETTCSSS
T ss_pred cccchHHHHhcccC--CCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhccCC-CEEEEecCCCCCC
Confidence 0000000 0000000000000000 00 00 111235666 9999999999999
Q ss_pred CcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCH--HHHHHHHHHHHHHHcC
Q 003363 774 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSD--FESFLNIGLWFKKYCK 826 (826)
Q Consensus 774 p~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~--~~~~~~i~~w~~~~l~ 826 (826)
|++++.++++.+++ .+++++++++|.+...... .+++..+.+||++++.
T Consensus 224 ~~~~~~~~~~~~~~----~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 224 PVEESEHIMNHVPH----STFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp CTHHHHHHHTTCSS----EEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHhcCC----ceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 99999888776654 7899999999998776664 6899999999999873
No 55
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.85 E-value=5.7e-21 Score=203.21 Aligned_cols=227 Identities=18% Similarity=0.209 Sum_probs=161.0
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHHHC-CcEEEEECCCCCCCCchhhhhcCCCCCC
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~~-G~~Vl~~d~rG~~g~G~~~~~~~~~~~~ 648 (826)
.+| .+.+++|.|++. .++.|+||++|||++.. ....|...+..|+++ ||.|+++||||.+++. .
T Consensus 56 ~~g-~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~~-----------~ 121 (310)
T 2hm7_A 56 PGR-TLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHK-----------F 121 (310)
T ss_dssp TTE-EEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC-----------T
T ss_pred CCC-eEEEEEEecCCC--CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCCC-----------C
Confidence 344 899999999742 56789999999977433 344677788888875 9999999999966532 1
Q ss_pred cchHHHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHhCCC----ceeEEEecCCccchhhhccCCCCCCch
Q 003363 649 SQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMVGTTDIPDWC 721 (826)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~~p~----~~~a~v~~~p~~~~~~~~~~~~~~~~~ 721 (826)
....+|+.++++|+.+.. .+|+++|+|+|||+||.+++.++.++|+ .++++|+.+|..+..... ..+.+
T Consensus 122 ~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~~~~~---~~~~~- 197 (310)
T 2hm7_A 122 PAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAH---PPASI- 197 (310)
T ss_dssp THHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCCCTTS---CCHHH-
T ss_pred CccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCCCccc---CCcch-
Confidence 235789999999998864 3678899999999999999999988776 699999999987653110 00000
Q ss_pred hhhhccCcCCccCCCCCChhhH----HHH---------hhcCccc--ccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHH
Q 003363 722 YVESYGSKGKDSFTESPSVEDL----TRF---------HSKSPIS--HISKVKTPTIFLLGAQDLRVPVSNGLQYARALR 786 (826)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~----~~~---------~~~sp~~--~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~ 786 (826)
..... ... ...... ..+ ...+|.. .+..+ +|+||++|++|..+ .++..++++|+
T Consensus 198 --~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~P~lii~G~~D~~~--~~~~~~~~~l~ 266 (310)
T 2hm7_A 198 --EENAE---GYL---LTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDLSGL-PPAYIATAQYDPLR--DVGKLYAEALN 266 (310)
T ss_dssp --HHTSS---SSS---SCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHHH
T ss_pred --hhcCC---CCC---CCHHHHHHHHHHhCCCCCccCCccCCCCcCccccCC-CCEEEEEecCCCch--HHHHHHHHHHH
Confidence 00000 000 000000 000 0123332 12333 49999999999987 78889999999
Q ss_pred hCCCCEEEEEeCCCCCCCCC----CCCHHHHHHHHHHHHHHHcC
Q 003363 787 EKGVETKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 787 ~~g~~~~~~~~p~~~H~~~~----~~~~~~~~~~i~~w~~~~l~ 826 (826)
+.|++++++++++++|++.. .+...+++..+.+||+++|+
T Consensus 267 ~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 267 KAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp HTTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred HCCCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 99999999999999998753 12335788999999999875
No 56
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.85 E-value=7.6e-20 Score=183.64 Aligned_cols=199 Identities=11% Similarity=0.093 Sum_probs=151.5
Q ss_pred ccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCC---CCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCC
Q 003363 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS---VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPG 645 (826)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~---~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~ 645 (826)
...+| .+.++++.|.+. ..++.|+||++||++.. .....+...+..|+++||.|+++|+||.+..... .
T Consensus 16 ~~~~g-~~~~~~~~p~~~-~~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~------~ 87 (220)
T 2fuk_A 16 DGPVG-PLDVAVDLPEPD-VAVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAGS------F 87 (220)
T ss_dssp EETTE-EEEEEEECCCTT-SCCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCSC------C
T ss_pred eCCCC-eEEEEEEeCCCC-CccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCCC------c
Confidence 34455 799999998731 01568999999996422 1223456678889999999999999995543221 1
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhh
Q 003363 646 KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 725 (826)
Q Consensus 646 ~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~ 725 (826)
.......+|+.++++++.++. +.++|+++|||+||.+++.++.++ .++++|+.+|......
T Consensus 88 ~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~--------------- 148 (220)
T 2fuk_A 88 DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD--------------- 148 (220)
T ss_dssp CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC---------------
T ss_pred ccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh---------------
Confidence 223446899999999999883 667999999999999999999887 8999999988764211
Q ss_pred ccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCC
Q 003363 726 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 805 (826)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~ 805 (826)
...+. ...|+|+++|++|..+|++.+.++++.++ .+++++++++++|.+.
T Consensus 149 --------------------------~~~~~-~~~p~l~i~g~~D~~~~~~~~~~~~~~~~---~~~~~~~~~~~~H~~~ 198 (220)
T 2fuk_A 149 --------------------------FSDVQ-PPAQWLVIQGDADEIVDPQAVYDWLETLE---QQPTLVRMPDTSHFFH 198 (220)
T ss_dssp --------------------------CTTCC-CCSSEEEEEETTCSSSCHHHHHHHHTTCS---SCCEEEEETTCCTTCT
T ss_pred --------------------------hhhcc-cCCcEEEEECCCCcccCHHHHHHHHHHhC---cCCcEEEeCCCCceeh
Confidence 00011 15789999999999999999988888774 3589999999999987
Q ss_pred CCCCHHHHHHHHHHHHHHHcC
Q 003363 806 RPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 806 ~~~~~~~~~~~i~~w~~~~l~ 826 (826)
. ...++.+.+.+||+++|+
T Consensus 199 ~--~~~~~~~~i~~~l~~~l~ 217 (220)
T 2fuk_A 199 R--KLIDLRGALQHGVRRWLP 217 (220)
T ss_dssp T--CHHHHHHHHHHHHGGGCS
T ss_pred h--hHHHHHHHHHHHHHHHhh
Confidence 5 245788999999999874
No 57
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.84 E-value=4.8e-21 Score=199.70 Aligned_cols=210 Identities=10% Similarity=0.103 Sum_probs=149.2
Q ss_pred CCCCCcEEEEEcCCCCCC---CCccchHHHHHH----HHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHH
Q 003363 588 DCSCDPLIVVLHGGPHSV---SLSSYSKSLAFL----SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAID 660 (826)
Q Consensus 588 ~~~~~P~vv~~HGg~~~~---~~~~~~~~~~~l----a~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~ 660 (826)
+.++.|+||++|||++.. ....|...+..| ++.||.|+++|||++++. .....++|+.++++
T Consensus 37 ~~~~~p~vv~lHGgg~~~g~~~~~~~~~~~~~L~~~a~~~g~~vi~~d~r~~~~~-----------~~~~~~~d~~~~~~ 105 (273)
T 1vkh_A 37 SQNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSMDTESTVCQYSIEYRLSPEI-----------TNPRNLYDAVSNIT 105 (273)
T ss_dssp CTTCCEEEEEECCSTTTCTTCCGGGGHHHHHHHHHHCTTCCEEEEEECCCCTTTS-----------CTTHHHHHHHHHHH
T ss_pred CCCCCeEEEEECCCcccCCcCChHHHHHHHHHHhhhhccCCcEEEEeecccCCCC-----------CCCcHHHHHHHHHH
Confidence 356789999999987543 244677778888 689999999999985432 11235789999999
Q ss_pred HHHHcCCCCCCcEEEEEecchHHHHHHHHHhC-----------------CCceeEEEecCCccchhhhccCCCCCCch--
Q 003363 661 HVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-----------------PDKFVAAAARNPLCNLALMVGTTDIPDWC-- 721 (826)
Q Consensus 661 ~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~-----------------p~~~~a~v~~~p~~~~~~~~~~~~~~~~~-- 721 (826)
+++++ ++.++|+|+|||+||.+++.++.++ |+.++++|+.+|+.++........ .+.
T Consensus 106 ~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~--~~~~~ 181 (273)
T 1vkh_A 106 RLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYP--EYDCF 181 (273)
T ss_dssp HHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCG--GGHHH
T ss_pred HHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcc--cHHHH
Confidence 99987 5778999999999999999999885 788999999999877654321110 110
Q ss_pred hhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCC
Q 003363 722 YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDV 801 (826)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~ 801 (826)
....++. ....+. ........+. ......+++|+|++||++|..+|+++++.+++.++..+.+++++++++++
T Consensus 182 ~~~~~~~-~~~~~~--~~~~~~~~~~----~~~~~~~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~~~~~~~~~~~~~g 254 (273)
T 1vkh_A 182 TRLAFPD-GIQMYE--EEPSRVMPYV----KKALSRFSIDMHLVHSYSDELLTLRQTNCLISCLQDYQLSFKLYLDDLGL 254 (273)
T ss_dssp HHHHCTT-CGGGCC--CCHHHHHHHH----HHHHHHHTCEEEEEEETTCSSCCTHHHHHHHHHHHHTTCCEEEEEECCCS
T ss_pred HHHHhcc-cccchh--hcccccChhh----hhcccccCCCEEEEecCCcCCCChHHHHHHHHHHHhcCCceEEEEeCCCc
Confidence 0011100 000000 0001111100 00122367999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q 003363 802 HGIERPQSDFESFLNIGLWF 821 (826)
Q Consensus 802 H~~~~~~~~~~~~~~i~~w~ 821 (826)
|.+.... .++.+.+.+||
T Consensus 255 H~~~~~~--~~~~~~i~~fl 272 (273)
T 1vkh_A 255 HNDVYKN--GKVAKYIFDNI 272 (273)
T ss_dssp GGGGGGC--HHHHHHHHHTC
T ss_pred ccccccC--hHHHHHHHHHc
Confidence 9876444 57778887775
No 58
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.84 E-value=2.9e-20 Score=204.18 Aligned_cols=289 Identities=15% Similarity=0.075 Sum_probs=185.0
Q ss_pred CCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceee
Q 003363 137 ENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISW 215 (826)
Q Consensus 137 ~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~w 215 (826)
.+...++||..+..........|+|||||++|||.+..+ +..+++.++ .+++.++++...... ...+.|
T Consensus 19 ~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-g~~~l~~~d~~~g~~~~lt~~~~~~---------~~~~~~ 88 (388)
T 3pe7_A 19 TGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFD-GPWNYYLLDLNTQVATQLTEGRGDN---------TFGGFL 88 (388)
T ss_dssp TCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTT-SSCEEEEEETTTCEEEECCCSSCBC---------SSSCEE
T ss_pred CCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCC-CCceEEEEeCCCCceEEeeeCCCCC---------ccceEE
Confidence 445567776554110001122389999999999998754 566788887 566666665433221 136789
Q ss_pred cCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCC
Q 003363 216 NSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL 295 (826)
Q Consensus 216 SPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~ 295 (826)
||||++|+|.+.+ ..|+++|+++++.+.+...+...
T Consensus 89 spdg~~l~~~~~~--------------------------------------------~~l~~~d~~~g~~~~~~~~~~~~ 124 (388)
T 3pe7_A 89 SPDDDALFYVKDG--------------------------------------------RNLMRVDLATLEENVVYQVPAEW 124 (388)
T ss_dssp CTTSSEEEEEETT--------------------------------------------TEEEEEETTTCCEEEEEECCTTE
T ss_pred cCCCCEEEEEeCC--------------------------------------------CeEEEEECCCCcceeeeechhhc
Confidence 9999999998532 47999999999988763222221
Q ss_pred -ccceEEEeeCCCCCccEEEEEeecCcceeeee-------eeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceec
Q 003363 296 -SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGI-------KYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL 367 (826)
Q Consensus 296 -~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~-------~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L 367 (826)
......++|||+. |+............. .+.......||++|+ .+++.+.+
T Consensus 125 ~~~~~~~~~~dg~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~-----------------~~g~~~~l 183 (388)
T 3pe7_A 125 VGYGTWVANSDCTK----LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDL-----------------KTGESTVI 183 (388)
T ss_dssp EEEEEEEECTTSSE----EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEET-----------------TTCCEEEE
T ss_pred ccccceeECCCCCe----eccccccCcccccccccchhhhhhccCCcceEEEEEC-----------------CCCceEEe
Confidence 1123345999997 775432111000000 001123358999998 78888888
Q ss_pred CCCCccccCceecC-CCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCC
Q 003363 368 TESISSAFFPRFSP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSI 446 (826)
Q Consensus 368 t~~~~~~~~p~~Sp-DG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~ 446 (826)
+........+.||| ||++|+|.+.... .....+||++|..++..+.++..... ...
T Consensus 184 ~~~~~~~~~~~~sp~dg~~l~~~~~~~~-----~~~~~~l~~~d~~~~~~~~l~~~~~~------------------~~~ 240 (388)
T 3pe7_A 184 LQENQWLGHPIYRPYDDSTVAFCHEGPH-----DLVDARMWLINEDGTNMRKVKTHAEG------------------ESC 240 (388)
T ss_dssp EEESSCEEEEEEETTEEEEEEEEECSCT-----TTSSCSEEEEETTSCCCEESCCCCTT------------------EEE
T ss_pred ecCCccccccEECCCCCCEEEEEEecCC-----CCCcceEEEEeCCCCceEEeeeCCCC------------------ccc
Confidence 87777778999999 9999999986421 12246899999887665544432210 011
Q ss_pred CCCccccCCCEEEEEEEeCCeE--EEEEEECCCCcEEEecCCCCC------eeeEEEeecCCEEEEEEeC-----CCCCC
Q 003363 447 LSNPWLSDGCTMLLSSIWGSSQ--VIISVNVSSGELLRITPAESN------FSWSLLTLDGDNIIAVSSS-----PVDVP 513 (826)
Q Consensus 447 ~~~~ws~Dg~~l~~~~~~~~~~--~l~~vdl~tg~~~~lt~~~~~------~~~~~~s~dg~~l~~~~s~-----~~~p~ 513 (826)
..+.|||||+.|++.+...+.. .||++|+++|+.++++..... .....|++||+.+++.... .....
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence 2467999999998887766544 599999999998888654330 1112689999998887643 25567
Q ss_pred eEEEEeeccc
Q 003363 514 QVKYGYFVDK 523 (826)
Q Consensus 514 ~l~~~~~~~~ 523 (826)
.|++.++.++
T Consensus 321 ~i~~~d~~~~ 330 (388)
T 3pe7_A 321 FLYVFNMKNG 330 (388)
T ss_dssp EEEEEETTTT
T ss_pred EEEEEeccCC
Confidence 8999987654
No 59
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.84 E-value=5e-20 Score=197.08 Aligned_cols=237 Identities=20% Similarity=0.205 Sum_probs=160.9
Q ss_pred eccCCCe-eEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHHH-CCcEEEEECCCCCCCCchhhhhcCC
Q 003363 568 LTKGAQK-PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLP 644 (826)
Q Consensus 568 ~~~~~g~-~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~ 644 (826)
+...+|. ++.+++|.|++ ..++.|+||++|||++.. ....+...+..|++ .||.|+++||||.+++.
T Consensus 56 i~~~~g~~~l~~~~~~P~~--~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~~~-------- 125 (323)
T 1lzl_A 56 APGLDGDPEVKIRFVTPDN--TAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETT-------- 125 (323)
T ss_dssp ECCSTTCCCEEEEEEEESS--CCSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTTSC--------
T ss_pred ecCCCCCceeEEEEEecCC--CCCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCCCC--------
Confidence 3344555 79999999974 346789999999987543 23456677778876 59999999999965431
Q ss_pred CCCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEEecchHHHHHHHHHhCCC----ceeEEEecCCccchhhhc----c
Q 003363 645 GKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMV----G 713 (826)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~a~~~p~----~~~a~v~~~p~~~~~~~~----~ 713 (826)
.....+|+.++++|+.+. ..+|+++|+|+|||+||.+++.++.++++ .++++++.+|+.+..... .
T Consensus 126 ---~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~ 202 (323)
T 1lzl_A 126 ---FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSMTN 202 (323)
T ss_dssp ---TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCCTTCCSHHHHH
T ss_pred ---CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccCCCcCchhHHH
Confidence 123578999999999874 23678899999999999999999987765 499999999987653210 0
Q ss_pred CCCCCCchh------hhhccCcCCccCCCCCChhhHHHHhhcCcccccCCC--CCcEEEEEeCCCCCCCcHHHHHHHHHH
Q 003363 714 TTDIPDWCY------VESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV--KTPTIFLLGAQDLRVPVSNGLQYARAL 785 (826)
Q Consensus 714 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~PvLii~G~~D~~vp~~~~~~~~~~l 785 (826)
......|.. ...+....... ..........+|... ..+ .+|+||++|+.|..+ .++..++++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~sp~~~-~~~~~~~P~li~~G~~D~~~--~~~~~~~~~l 273 (323)
T 1lzl_A 203 FVDTPLWHRPNAILSWKYYLGESYSG------PEDPDVSIYAAPSRA-TDLTGLPPTYLSTMELDPLR--DEGIEYALRL 273 (323)
T ss_dssp CSSCSSCCHHHHHHHHHHHHCTTCCC------TTCSCCCTTTCGGGC-SCCTTCCCEEEEEETTCTTH--HHHHHHHHHH
T ss_pred hccCCCCCHHHHHHHHHHhCCCCccc------ccccCCCcccCcccC-cccCCCChhheEECCcCCch--HHHHHHHHHH
Confidence 000000000 00000000000 000000011223222 122 279999999999987 6889999999
Q ss_pred HhCCCCEEEEEeCCCCCCCCCCC---CHHHHHHHHHHHHHHHcC
Q 003363 786 REKGVETKVIVFPNDVHGIERPQ---SDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 786 ~~~g~~~~~~~~p~~~H~~~~~~---~~~~~~~~i~~w~~~~l~ 826 (826)
++.|+++++++|||++|++.... ...+++..+.+||+++++
T Consensus 274 ~~~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~ 317 (323)
T 1lzl_A 274 LQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLR 317 (323)
T ss_dssp HHTTCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTC
T ss_pred HHcCCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999865322 245788999999999874
No 60
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.84 E-value=4.3e-21 Score=203.41 Aligned_cols=199 Identities=18% Similarity=0.193 Sum_probs=149.2
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHH
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 654 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D 654 (826)
+...+|.|++ ..++.|+||++|||++... ...+...++.|+++||.|+++|||++++.. ....+.|
T Consensus 68 ~~~~~~~p~~--~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~r~~~~~~-----------~~~~~~d 134 (303)
T 4e15_A 68 QLVDVFYSEK--TTNQAPLFVFVHGGYWQEMDMSMSCSIVGPLVRRGYRVAVMDYNLCPQVT-----------LEQLMTQ 134 (303)
T ss_dssp CEEEEEECTT--CCTTCCEEEEECCSTTTSCCGGGSCTTHHHHHHTTCEEEEECCCCTTTSC-----------HHHHHHH
T ss_pred cEEEEEecCC--CCCCCCEEEEECCCcCcCCChhHHHHHHHHHHhCCCEEEEecCCCCCCCC-----------hhHHHHH
Confidence 4556777863 4567899999999875432 335666788899999999999999965432 1234789
Q ss_pred HHHHHHHHHHc-CCCCCCcEEEEEecchHHHHHHHHHhCC-------CceeEEEecCCccchhhhccCCCCCCchhhhhc
Q 003363 655 VLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAP-------DKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 726 (826)
Q Consensus 655 ~~~~i~~l~~~-~~~d~~rv~l~G~S~GG~~a~~~a~~~p-------~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 726 (826)
+.++++++.+. ..++.++|+|+|||+||++++.++.+.+ ++++++|+.+|+.++..+..... .+ ....+
T Consensus 135 ~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~~~~~~--~~-~~~~~ 211 (303)
T 4e15_A 135 FTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLRELSNLES--VN-PKNIL 211 (303)
T ss_dssp HHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHHHTCTT--TS-GGGTT
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhhhcccc--cc-hhhhh
Confidence 99999999873 2256889999999999999999988654 37999999999988765432110 00 00001
Q ss_pred cCcCCccCCCCCChhhHHHHhhcCcc-cccCCC----CCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCC
Q 003363 727 GSKGKDSFTESPSVEDLTRFHSKSPI-SHISKV----KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDV 801 (826)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~sp~-~~~~~i----~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~ 801 (826)
+ .. .+.+...+|+ ..+..+ ++|+|++||++|..+|+.++.+++++|++.|.+++++++|+++
T Consensus 212 ~--------~~-----~~~~~~~sp~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~g~~~~~~~~~g~~ 278 (303)
T 4e15_A 212 G--------LN-----ERNIESVSPMLWEYTDVTVWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKKGYKASFTLFKGYD 278 (303)
T ss_dssp C--------CC-----TTTTTTTCGGGCCCCCGGGGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHHTCCEEEEEEEEEE
T ss_pred c--------CC-----HHHHHHcCchhhcccccccCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHCCCceEEEEeCCCC
Confidence 1 11 1223455666 556655 8999999999999999999999999999999999999999999
Q ss_pred CC
Q 003363 802 HG 803 (826)
Q Consensus 802 H~ 803 (826)
|.
T Consensus 279 H~ 280 (303)
T 4e15_A 279 HF 280 (303)
T ss_dssp TT
T ss_pred ch
Confidence 95
No 61
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.84 E-value=7.6e-20 Score=189.33 Aligned_cols=240 Identities=16% Similarity=0.181 Sum_probs=155.7
Q ss_pred ccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCC
Q 003363 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (826)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~ 648 (826)
...+|..+.+..+.+. +.+.|+||++||++.......+......|+++||.|+++|+||.+..... ..
T Consensus 18 ~~~~g~~l~~~~~~~~----~~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--------~~ 85 (270)
T 3llc_A 18 QGSDARSIAALVRAPA----QDERPTCIWLGGYRSDMTGTKALEMDDLAASLGVGAIRFDYSGHGASGGA--------FR 85 (270)
T ss_dssp SGGGCEEEEEEEECCS----STTSCEEEEECCTTCCTTSHHHHHHHHHHHHHTCEEEEECCTTSTTCCSC--------GG
T ss_pred eccCcceEEEEeccCC----CCCCCeEEEECCCccccccchHHHHHHHHHhCCCcEEEeccccCCCCCCc--------cc
Confidence 3446778877666553 23479999999977653332344467778889999999999996544322 11
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHh---CC---CceeEEEecCCccchhhhccCCCCCCch-
Q 003363 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ---AP---DKFVAAAARNPLCNLALMVGTTDIPDWC- 721 (826)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~---~p---~~~~a~v~~~p~~~~~~~~~~~~~~~~~- 721 (826)
...++++.+.+..+++. +..++++|+|||+||.+++.++.+ +| ++++++|+.+|..++.............
T Consensus 86 ~~~~~~~~~d~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~~~~~~~~~~ 163 (270)
T 3llc_A 86 DGTISRWLEEALAVLDH--FKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLIEPLLGDRER 163 (270)
T ss_dssp GCCHHHHHHHHHHHHHH--HCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTTGGGCCHHHH
T ss_pred cccHHHHHHHHHHHHHH--hccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhhhhhhhhhhh
Confidence 22344444444333333 235789999999999999999999 99 9999999999987654321111110000
Q ss_pred --hhhhccCcCCccCCCCC---ChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEE
Q 003363 722 --YVESYGSKGKDSFTESP---SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 796 (826)
Q Consensus 722 --~~~~~~~~~~~~~~~~~---~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 796 (826)
............+...+ ................+.++++|+|+++|++|..+|.+.+..+++.+.. .++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~v~~~~~~~~~~~~~~--~~~~~~~ 241 (270)
T 3llc_A 164 AELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDTGCPVHILQGMADPDVPYQHALKLVEHLPA--DDVVLTL 241 (270)
T ss_dssp HHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCCCSCEEEEEETTCSSSCHHHHHHHHHTSCS--SSEEEEE
T ss_pred hhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC--CCeeEEE
Confidence 00000000001111111 1122333444455667788999999999999999999999888887754 3589999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 797 FPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 797 ~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
+++++|.+...+...++...+.+||++.
T Consensus 242 ~~~~gH~~~~~~~~~~~~~~i~~fl~~~ 269 (270)
T 3llc_A 242 VRDGDHRLSRPQDIDRMRNAIRAMIEPR 269 (270)
T ss_dssp ETTCCSSCCSHHHHHHHHHHHHHHHC--
T ss_pred eCCCcccccccccHHHHHHHHHHHhcCC
Confidence 9999998766666667778888888653
No 62
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.84 E-value=7.8e-20 Score=195.38 Aligned_cols=222 Identities=18% Similarity=0.228 Sum_probs=154.5
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-ccchHHHHHHHH-CCcEEEEECCCCCCCCchhhhhcCCCCCCc
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~~~~~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~ 649 (826)
+|.++ |.|++ .....|+||++|||++.... ..+...+..|++ .||.|+++|||++++.. ..
T Consensus 66 ~g~~~----~~p~~--~~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-----------~~ 128 (322)
T 3k6k_A 66 GGVPC----IRQAT--DGAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENP-----------FP 128 (322)
T ss_dssp TTEEE----EEEEC--TTCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTTSC-----------TT
T ss_pred CCEeE----EecCC--CCCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCCCC-----------Cc
Confidence 45554 45653 23334459999998754333 356666777775 49999999999965431 23
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCc----eeEEEecCCccchhhhccCCCCCCchhhhh
Q 003363 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVES 725 (826)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~ 725 (826)
..++|+.++++|+.++ .+|+++|+|+|+|+||.+++.++.++++. ++++|+.+|+.++.... ..+...
T Consensus 129 ~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~-------~~~~~~ 200 (322)
T 3k6k_A 129 AAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSR-------WSNSNL 200 (322)
T ss_dssp HHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCS-------HHHHHT
T ss_pred hHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCcccCc-------cchhhc
Confidence 4589999999999998 47899999999999999999999887765 99999999988753210 000000
Q ss_pred ccCcCCccCCCCCChhhH----HHH--------hhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEE
Q 003363 726 YGSKGKDSFTESPSVEDL----TRF--------HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 793 (826)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~----~~~--------~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 793 (826)
... ..+ ...... ..+ ...+|+....+..+|+||+||++|..+ .++..++++|+..|++++
T Consensus 201 ~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~pP~li~~G~~D~~~--~~~~~~~~~l~~~g~~~~ 272 (322)
T 3k6k_A 201 ADR---DFL---AEPDTLGEMSELYVGGEDRKNPLISPVYADLSGLPEMLIHVGSEEALL--SDSTTLAERAGAAGVSVE 272 (322)
T ss_dssp GGG---CSS---SCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCTTCCCEEEEEESSCTTH--HHHHHHHHHHHHTTCCEE
T ss_pred cCC---CCc---CCHHHHHHHHHHhcCCCCCCCCcCCcccccccCCCcEEEEECCcCccH--HHHHHHHHHHHHCCCCEE
Confidence 000 000 000000 001 123444333334479999999999874 789999999999999999
Q ss_pred EEEeCCCCCCCCCC----CCHHHHHHHHHHHHHHHcC
Q 003363 794 VIVFPNDVHGIERP----QSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 794 ~~~~p~~~H~~~~~----~~~~~~~~~i~~w~~~~l~ 826 (826)
+++||+++|.+... +...+++..+.+||+++|+
T Consensus 273 l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (322)
T 3k6k_A 273 LKIWPDMPHVFQMYGKFVNAADISIKEICHWISARIS 309 (322)
T ss_dssp EEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC
T ss_pred EEEECCCccccccccccChHHHHHHHHHHHHHHHHHh
Confidence 99999999987532 2345788999999999874
No 63
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.84 E-value=1.6e-19 Score=215.55 Aligned_cols=315 Identities=11% Similarity=0.044 Sum_probs=193.3
Q ss_pred EEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCC
Q 003363 99 WTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENES 178 (826)
Q Consensus 99 ~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~ 178 (826)
...+.+||||+.+ +. + ....++++++.+. +..++.... ......+..++|||||++|||.....+..
T Consensus 19 ~~~~~~spdg~~~-~~-~--------~dg~i~~~d~~~g--~~~~~~~~~-~~~~~~v~~~~~SpDg~~l~~~~~~~~~~ 85 (723)
T 1xfd_A 19 DPEAKWISDTEFI-YR-E--------QKGTVRLWNVETN--TSTVLIEGK-KIESLRAIRYEISPDREYALFSYNVEPIY 85 (723)
T ss_dssp CCCCCBSSSSCBC-CC-C--------SSSCEEEBCGGGC--CCEEEECTT-TTTTTTCSEEEECTTSSEEEEEESCCCCS
T ss_pred ccccEEcCCCcEE-EE-e--------CCCCEEEEECCCC--cEEEEeccc-cccccccceEEECCCCCEEEEEecCccce
Confidence 4456789999955 32 1 1236777776433 333333221 00001378899999999999997654221
Q ss_pred -----CeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCC
Q 003363 179 -----PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNS 252 (826)
Q Consensus 179 -----~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (826)
..+++.+ .+++.+++.... .... +...++|||||++|||++.
T Consensus 86 ~~~~~~~i~~~d~~~~~~~~l~~~~-~~~~------~~~~~~~SPdG~~la~~~~------------------------- 133 (723)
T 1xfd_A 86 QHSYTGYYVLSKIPHGDPQSLDPPE-VSNA------KLQYAGWGPKGQQLIFIFE------------------------- 133 (723)
T ss_dssp SSCCCSEEEEEESSSCCCEECCCTT-CCSC------CCSBCCBCSSTTCEEEEET-------------------------
T ss_pred eecceeeEEEEECCCCceEeccCCc-cccc------cccccEECCCCCEEEEEEC-------------------------
Confidence 3455444 445544333221 1111 1268999999999999843
Q ss_pred CCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCC-CC----------------ccceEEEeeCCCCCccEEEE
Q 003363 253 WKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-SL----------------SVGQVVWAPLNEGLHQYLVF 315 (826)
Q Consensus 253 ~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~-~~----------------~~~~~~wSPDg~~~~~~lvf 315 (826)
.+|+++|+++|+.++++.... .. ....++|||||+. |+|
T Consensus 134 --------------------~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~----la~ 189 (723)
T 1xfd_A 134 --------------------NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTR----LAY 189 (723)
T ss_dssp --------------------TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSE----EEE
T ss_pred --------------------CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCE----EEE
Confidence 469999999998887741111 11 1257999999999 999
Q ss_pred EeecCcce-ee--------------eeeeec----cCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCC-----
Q 003363 316 VGWSSETR-KL--------------GIKYCY----NRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTES----- 370 (826)
Q Consensus 316 ~~~~~~~~-~~--------------g~~~~~----~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~----- 370 (826)
.+...... .. .+.+.. +....|+++|+ .+++ .+.|+.+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~-----------------~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 190 AAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGL-----------------NGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp EEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEES-----------------SSSCCCEECCCCCCGGG
T ss_pred EEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEEC-----------------CCCceeEEeeCCccCCC
Confidence 87543210 00 000100 12237999998 5665 3666653
Q ss_pred -CccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccC-CCCC
Q 003363 371 -ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS-SILS 448 (826)
Q Consensus 371 -~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~-~~~~ 448 (826)
...+..+.|||||+.|++.+.+. .....|+++|+.+++...+.... ... |.. ....
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~-------~~~~~i~~~d~~~g~~~~~~~~~----------~~~-----~~~~~~~~ 310 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRA-------QNVSILTLCDATTGVCTKKHEDE----------SEA-----WLHRQNEE 310 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETT-------SCEEEEEEEETTTCCEEEEEEEE----------CSS-----CCCCCCCC
T ss_pred ccceeEEEEEeCCCeEEEEEEcCC-------CCeEEEEEEeCCCCcceEEEEec----------cCC-----EEeccCCC
Confidence 44567899999999887776653 23467999999886643222110 000 000 0136
Q ss_pred CccccCCCEEEEE-EEeCC----eEEEEEEE-CCCCc---EEEecCCCCCee-eEEEeecCCEEEEEEeCCC-CCCeEEE
Q 003363 449 NPWLSDGCTMLLS-SIWGS----SQVIISVN-VSSGE---LLRITPAESNFS-WSLLTLDGDNIIAVSSSPV-DVPQVKY 517 (826)
Q Consensus 449 ~~ws~Dg~~l~~~-~~~~~----~~~l~~vd-l~tg~---~~~lt~~~~~~~-~~~~s~dg~~l~~~~s~~~-~p~~l~~ 517 (826)
+.|||||+.|++. +...+ ..+||.+| ..+++ .+.|+.+...+. ...|++||+.|++...... .-..||.
T Consensus 311 ~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 311 PVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp CEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred ceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 7899999999887 44555 67899999 67777 778876544433 3579999999988776531 2345666
Q ss_pred Eeec
Q 003363 518 GYFV 521 (826)
Q Consensus 518 ~~~~ 521 (826)
+++.
T Consensus 391 ~~~~ 394 (723)
T 1xfd_A 391 ANTV 394 (723)
T ss_dssp ECSS
T ss_pred EeCC
Confidence 6543
No 64
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.84 E-value=9.8e-21 Score=201.65 Aligned_cols=229 Identities=21% Similarity=0.205 Sum_probs=159.3
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHHH-CCcEEEEECCCCCCCCchhhhhcCCCCC
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKV 647 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~~~~ 647 (826)
..+| .+.+++|.|.+ .++.|+||++|||++.. ....+...+..|++ .||.|+++||||.+++.
T Consensus 58 ~~~g-~~~~~~~~P~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~----------- 122 (313)
T 2wir_A 58 GRGG-PIRARVYRPRD---GERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHK----------- 122 (313)
T ss_dssp ETTE-EEEEEEEECSC---CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHCCEEEEEECCCTTTSC-----------
T ss_pred CCCC-cEEEEEEecCC---CCCccEEEEECCCcccCCChHHHHHHHHHHHHHcCCEEEEeecCCCCCCC-----------
Confidence 3344 89999999973 45689999999987432 34467778888887 49999999999965431
Q ss_pred CcchHHHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHhCCCc----eeEEEecCCccchhhhccCCCCCCc
Q 003363 648 GSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDW 720 (826)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~p~~~~~~~~~~~~~~~~ 720 (826)
.....+|+.++++++.+.. .+|+++|+|+|+|+||.+++.++.+++++ ++++|+.+|+.++.... ...+
T Consensus 123 ~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~----~~~~ 198 (313)
T 2wir_A 123 FPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYPAVNLTGSP----TVSR 198 (313)
T ss_dssp TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCCSSCC----CHHH
T ss_pred CCchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEEEEcCccCCCCCC----CcCH
Confidence 1235789999999988752 36778999999999999999999988776 99999999988721110 0000
Q ss_pred hhhhhccCcCCccCCCCCChhhHHH-------------HhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHh
Q 003363 721 CYVESYGSKGKDSFTESPSVEDLTR-------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALRE 787 (826)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~ 787 (826)
..+... .... ........ ....+|+...-+..+|+||++|+.|..+ .++..++++|+.
T Consensus 199 ---~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~P~lii~G~~D~~~--~~~~~~~~~l~~ 269 (313)
T 2wir_A 199 ---VEYSGP--EYVI--LTADLMAWFGRQYFSKPQDALSPYASPIFADLSNLPPALVITAEYDPLR--DEGELYAHLLKT 269 (313)
T ss_dssp ---HHTCSG--GGCS--SCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCCTTCCCEEEEEEEECTTH--HHHHHHHHHHHH
T ss_pred ---HHhccc--CCCc--cCHHHHHHHHHHhCCCCCccCCCccCcCcccccCCCcceEEEcCcCcCh--HHHHHHHHHHHH
Confidence 000000 0000 00000000 0112444211122369999999999988 578899999999
Q ss_pred CCCCEEEEEeCCCCCCCCCC----CCHHHHHHHHHHHHHHHcC
Q 003363 788 KGVETKVIVFPNDVHGIERP----QSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 788 ~g~~~~~~~~p~~~H~~~~~----~~~~~~~~~i~~w~~~~l~ 826 (826)
.|+++++++++|++|.+... +...+++..+.+||+++++
T Consensus 270 ~g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 270 RGVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp TTCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999987532 2335788899999998764
No 65
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.84 E-value=4.7e-20 Score=196.90 Aligned_cols=228 Identities=19% Similarity=0.204 Sum_probs=157.8
Q ss_pred eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHHH-CCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 574 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 574 ~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
.++.+.+|.|.+ .++.|+||++|||++.. ....|...+..|++ .||.|+++||||.+++. ....
T Consensus 75 ~~i~~~iy~P~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~~-----------~p~~ 140 (323)
T 3ain_A 75 TNIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENK-----------FPAA 140 (323)
T ss_dssp SEEEEEEEECSS---CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC-----------TTHH
T ss_pred CeEEEEEEecCC---CCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCCC-----------Ccch
Confidence 379999999973 56789999999987433 34467778888876 49999999999965431 1235
Q ss_pred HHHHHHHHHHHHHcCC-C-CCCcEEEEEecchHHHHHHHHHhCCCce---eEEEecCCccchhhhcc----CCCCCCch-
Q 003363 652 VNDVLTAIDHVIDMGL-A-NPSKVTVVGGSHGGFLTTHLIGQAPDKF---VAAAARNPLCNLALMVG----TTDIPDWC- 721 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~-~-d~~rv~l~G~S~GG~~a~~~a~~~p~~~---~a~v~~~p~~~~~~~~~----~~~~~~~~- 721 (826)
++|+.++++|+.+... + |+++|+|+|+|+||.+++.++.++|++. +++|+.+|+.+...... ......+.
T Consensus 141 ~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~l~~ 220 (323)
T 3ain_A 141 VVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDLITKSLYDNGEGFFLTR 220 (323)
T ss_dssp HHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCSCCHHHHHHSSSSSSCH
T ss_pred HHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCCCCccHHHhccCCCCCH
Confidence 7899999999988631 1 7899999999999999999998887765 89999999876421100 00000000
Q ss_pred -hhhhccCcCCccCCCCCChhhHHHHhhcCcccc-cCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 003363 722 -YVESYGSKGKDSFTESPSVEDLTRFHSKSPISH-ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 799 (826)
Q Consensus 722 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~ 799 (826)
....+. ..+.... .. ......+|+.. +..+ +|+||++|+.|..+ .++..++++|+..|++++++++++
T Consensus 221 ~~~~~~~----~~~~~~~--~~-~~~~~~sp~~~~l~~l-~P~lii~G~~D~l~--~~~~~~a~~l~~ag~~~~~~~~~g 290 (323)
T 3ain_A 221 EHIDWFG----QQYLRSF--AD-LLDFRFSPILADLNDL-PPALIITAEHDPLR--DQGEAYANKLLQSGVQVTSVGFNN 290 (323)
T ss_dssp HHHHHHH----HHHCSSG--GG-GGCTTTCGGGSCCTTC-CCEEEEEETTCTTH--HHHHHHHHHHHHTTCCEEEEEETT
T ss_pred HHHHHHH----HHhCCCC--cc-cCCcccCcccCcccCC-CHHHEEECCCCccH--HHHHHHHHHHHHcCCCEEEEEECC
Confidence 000000 0000000 00 00012234332 2222 59999999999987 688899999999999999999999
Q ss_pred CCCCCCCC----CCHHHHHHHHHHHHHHHc
Q 003363 800 DVHGIERP----QSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 800 ~~H~~~~~----~~~~~~~~~i~~w~~~~l 825 (826)
++|.+... +...+++..+.+||+++|
T Consensus 291 ~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l 320 (323)
T 3ain_A 291 VIHGFVSFFPFIEQGRDAIGLIGYVLRKVF 320 (323)
T ss_dssp CCTTGGGGTTTCHHHHHHHHHHHHHHHHHH
T ss_pred CccccccccCcCHHHHHHHHHHHHHHHHHh
Confidence 99997642 334578899999999876
No 66
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.84 E-value=3.6e-20 Score=193.73 Aligned_cols=233 Identities=12% Similarity=0.067 Sum_probs=156.2
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH---HHHHHHHCCcEEEEECCCCCC-----------CCc
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSL-----------GFG 636 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~Vl~~d~rG~~-----------g~G 636 (826)
..|.++...+|.|++++..+++|+||++||++... ..|.. ..+.+++.||.|+++|.++.+ |.|
T Consensus 24 ~~g~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~~~~~~g~g 101 (280)
T 3ls2_A 24 STHCTMRFAVFLPPGASESNKVPVLYWLSGLTCTD--ENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNEDSYDFAQG 101 (280)
T ss_dssp TTTEEEEEEEEECTTCBTTBCEEEEEEECCTTCCS--HHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCSCTTSSTT
T ss_pred hcCCceEEEEEcCCCCCCCCCcCEEEEeCCCCCCh--hhhhcchhHHHHHhhCCeEEEEeCCcccccccccccccccccC
Confidence 45788999999999876678899999999987552 23332 355677889999999976422 111
Q ss_pred hhhhhcCCC-CC-Ccch-HHHHH-HHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc
Q 003363 637 EEALQSLPG-KV-GSQD-VNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 712 (826)
Q Consensus 637 ~~~~~~~~~-~~-~~~~-~~D~~-~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~ 712 (826)
..+....+. .+ .... ...+. +.+.++.+...+ .++++|+|||+||++++.++.++|++|+++++.+|+++.....
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~~ 180 (280)
T 3ls2_A 102 AGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPV-TSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPIVNPINCP 180 (280)
T ss_dssp CCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCCSCGGGSH
T ss_pred CccccccccccccccccHHHHHHHHHHHHHHhhCCC-CCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCccCcccCc
Confidence 211111110 00 0111 22222 334444444333 4899999999999999999999999999999999987653210
Q ss_pred cCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCC----CCcEEEEEeCCCCCCCcHH-HHHHHHHHHh
Q 003363 713 GTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV----KTPTIFLLGAQDLRVPVSN-GLQYARALRE 787 (826)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i----~~PvLii~G~~D~~vp~~~-~~~~~~~l~~ 787 (826)
.. ...+...++. ....+...+|...+.++ .+|+|++||+.|.+++.+. +++++++|++
T Consensus 181 ~~----~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~ 243 (280)
T 3ls2_A 181 WG----VKAFTGYLGA-------------DKTTWAQYDSCKLMAKAEQSNYLPMLVSQGDADNFLDEQLKPQNLVAVAKQ 243 (280)
T ss_dssp HH----HHHHHHHHCS-------------CGGGTGGGCHHHHHHTCCGGGCCCEEEEEETTCTTCCCCCCHHHHHHHHHH
T ss_pred ch----hhHHHhhcCc-------------hHHHHHhcCHHHHHHhccccCCCcEEEEEeCCCcccCCchhHHHHHHHHHH
Confidence 00 0000011111 01123344555555554 4599999999999999854 8899999999
Q ss_pred CCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 788 KGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 788 ~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
.|++++++++|+++|.+.. .......+++|+.++|+
T Consensus 244 ~g~~~~~~~~~g~~H~~~~---~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 244 KDYPLTLEMQTGYDHSYFF---ISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HTCCEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred hCCCceEEEeCCCCCchhh---HHHHHHHHHHHHHHHhc
Confidence 9999999999999998642 23567788999999875
No 67
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.84 E-value=8.4e-21 Score=204.56 Aligned_cols=232 Identities=16% Similarity=0.173 Sum_probs=154.7
Q ss_pred eeEEEEEEecCCC-CCCCCCcEEEEEcCCCCCCCCc---cchHHHHHHH-HCCcEEEEECCCCCCCCchhhhhcCCCCCC
Q 003363 574 KPFEAIFVSSSHK-KDCSCDPLIVVLHGGPHSVSLS---SYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (826)
Q Consensus 574 ~~l~~~~~~P~~~-~~~~~~P~vv~~HGg~~~~~~~---~~~~~~~~la-~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~ 648 (826)
..+.+.+|.|++. ...++.|+||++|||++..... .|...+..|+ +.||.|+++||||.+++. .
T Consensus 64 ~~~~~~~~~P~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~-----------~ 132 (338)
T 2o7r_A 64 HNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHR-----------L 132 (338)
T ss_dssp TTEEEEEEEEGGGGGSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTC-----------T
T ss_pred CCeEEEEEeCCCCCcCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCC-----------C
Confidence 3466678888753 2357889999999988654332 2667788887 789999999999965421 1
Q ss_pred cchHHHHHHHHHHHHHcC------CCCCCcEEEEEecchHHHHHHHHHhCCC--------ceeEEEecCCccchhhhcc-
Q 003363 649 SQDVNDVLTAIDHVIDMG------LANPSKVTVVGGSHGGFLTTHLIGQAPD--------KFVAAAARNPLCNLALMVG- 713 (826)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~------~~d~~rv~l~G~S~GG~~a~~~a~~~p~--------~~~a~v~~~p~~~~~~~~~- 713 (826)
...++|+.++++|+.++. .+|.++|+|+|||+||.+++.++.++|+ +++++|+.+|+.+......
T Consensus 133 ~~~~~d~~~~~~~l~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~ 212 (338)
T 2o7r_A 133 PAAYDDAMEALQWIKDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGS 212 (338)
T ss_dssp THHHHHHHHHHHHHHTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHH
T ss_pred chHHHHHHHHHHHHHhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChh
Confidence 235889999999998762 2577899999999999999999999888 8999999999875421100
Q ss_pred ---CCCCCC--chhhhhccCcCCccCCCCCChhhHHHHhhcCcc---------cccCCCCCcEEEEEeCCCCCCCcHHHH
Q 003363 714 ---TTDIPD--WCYVESYGSKGKDSFTESPSVEDLTRFHSKSPI---------SHISKVKTPTIFLLGAQDLRVPVSNGL 779 (826)
Q Consensus 714 ---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~---------~~~~~i~~PvLii~G~~D~~vp~~~~~ 779 (826)
....+. ......+... .+......+ ....+|. ..+.++.+|+|+++|++|..++ ++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~P~Lvi~G~~D~~~~--~~~ 283 (338)
T 2o7r_A 213 ELRLANDSRLPTFVLDLIWEL---SLPMGADRD----HEYCNPTAESEPLYSFDKIRSLGWRVMVVGCHGDPMID--RQM 283 (338)
T ss_dssp HHHTTTCSSSCHHHHHHHHHH---HSCTTCCTT----STTTCCC----CCTHHHHHHHHTCEEEEEEETTSTTHH--HHH
T ss_pred hhccCCCcccCHHHHHHHHHH---hCCCCCCCC----CcccCCCCCCcccccHhhhcCCCCCEEEEECCCCcchH--HHH
Confidence 000000 0000000000 000000000 0001111 1222345699999999999985 567
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCCCCCCC--CCHHHHHHHHHHHHHHHc
Q 003363 780 QYARALREKGVETKVIVFPNDVHGIERP--QSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 780 ~~~~~l~~~g~~~~~~~~p~~~H~~~~~--~~~~~~~~~i~~w~~~~l 825 (826)
+++++|++.+.+++++++++++|.+... +...++++.+.+||++++
T Consensus 284 ~~~~~l~~~~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~ 331 (338)
T 2o7r_A 284 ELAERLEKKGVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSC 331 (338)
T ss_dssp HHHHHHHHTTCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHCCCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhc
Confidence 8899999999999999999999987543 233578899999998875
No 68
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.84 E-value=3.4e-20 Score=204.87 Aligned_cols=239 Identities=15% Similarity=0.187 Sum_probs=160.9
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHH-HHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcc
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~-~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~ 650 (826)
+|..+.++++.+ +.++.|+||++||+... ...+.... ..+.++||.|+++|+||.+. +.... ......
T Consensus 143 ~~~~l~~~~~~~----~~~~~p~vv~~HG~~~~--~~~~~~~~~~~~~~~g~~vi~~D~~G~G~---s~~~~--~~~~~~ 211 (405)
T 3fnb_A 143 EGELLPGYAIIS----EDKAQDTLIVVGGGDTS--REDLFYMLGYSGWEHDYNVLMVDLPGQGK---NPNQG--LHFEVD 211 (405)
T ss_dssp TTEEEEEEEECC----SSSCCCEEEEECCSSCC--HHHHHHHTHHHHHHTTCEEEEECCTTSTT---GGGGT--CCCCSC
T ss_pred CCeEEEEEEEcC----CCCCCCEEEEECCCCCC--HHHHHHHHHHHHHhCCcEEEEEcCCCCcC---CCCCC--CCCCcc
Confidence 467899988843 34556999999997543 33443333 35668999999999999554 32211 122334
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccC-----CCCCCchhhhh
Q 003363 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-----TDIPDWCYVES 725 (826)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~-----~~~~~~~~~~~ 725 (826)
...|+.++++++.... ++|+|+|||+||++++.++.++| +++++|+.+|+.++...... ...+.+.....
T Consensus 212 ~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~ 286 (405)
T 3fnb_A 212 ARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFSTALKAPKTILKWG 286 (405)
T ss_dssp THHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC-------------
T ss_pred HHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhhhhhCcHHHHHHH
Confidence 4788999999976653 78999999999999999999988 89999999999887543210 00111100000
Q ss_pred ccC-------------cCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCE
Q 003363 726 YGS-------------KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVET 792 (826)
Q Consensus 726 ~~~-------------~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~ 792 (826)
... .....+...........+....+...+.++++|+|+++|++|..+|+.++.++++.+++.+.++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~l~~~~~~~ 366 (405)
T 3fnb_A 287 SKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKIDVPSLFLVGAGEDSELMRQSQVLYDNFKQRGIDV 366 (405)
T ss_dssp -----CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGCCSCEEEEEETTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhCCCCEEEEecCCCcCCChHHHHHHHHHhccCCCCc
Confidence 000 0000000001111122333344444478899999999999999999999999999999998999
Q ss_pred EEEEeCCCCCCC--CCCCCHHHHHHHHHHHHHHHcC
Q 003363 793 KVIVFPNDVHGI--ERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 793 ~~~~~p~~~H~~--~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
+++++++..|.. ...+....+.+.|.+||+++|+
T Consensus 367 ~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~ 402 (405)
T 3fnb_A 367 TLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFK 402 (405)
T ss_dssp EEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC
T ss_pred eEEEEcCCccchhccccchHHHHHHHHHHHHHHHhC
Confidence 999997666542 2355566888999999999874
No 69
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.84 E-value=1.3e-20 Score=200.77 Aligned_cols=230 Identities=17% Similarity=0.228 Sum_probs=161.7
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CccchHHHHHHH-HCCcEEEEECCCCCCCCchhhhhcCC
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLP 644 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-~~~~~~~~~~la-~~G~~Vl~~d~rG~~g~G~~~~~~~~ 644 (826)
++...+|.++.+++|.|.+ ++.|+||++|||++... ...+...+..|+ +.||.|+++|||+++++
T Consensus 64 ~i~~~~G~~i~~~~~~P~~----~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~--------- 130 (317)
T 3qh4_A 64 VVTGEAGRPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEH--------- 130 (317)
T ss_dssp EEECTTSCEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTS---------
T ss_pred EecCCCCCeEEEEEEecCC----CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCC---------
Confidence 4445567789999999973 67899999999875432 335666777776 56999999999986653
Q ss_pred CCCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEEecchHHHHHHHHHhCCC----ceeEEEecCCccchhhhccCCCC
Q 003363 645 GKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALMVGTTDI 717 (826)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~a~~~p~----~~~a~v~~~p~~~~~~~~~~~~~ 717 (826)
.....++|+.++++|+.++ ..+|++||+|+|+|+||.+++.++.++++ .++++++.+|+++....
T Consensus 131 --~~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~------ 202 (317)
T 3qh4_A 131 --PYPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDRPT------ 202 (317)
T ss_dssp --CTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSSCC------
T ss_pred --CCchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCCCC------
Confidence 2234588999999999885 44788999999999999999999987655 48999999998875310
Q ss_pred CCchhhhhccCcCCccCCCCCC-hhhHHHHh-------hcCcccccCCC--CCcEEEEEeCCCCCCCcHHHHHHHHHHHh
Q 003363 718 PDWCYVESYGSKGKDSFTESPS-VEDLTRFH-------SKSPISHISKV--KTPTIFLLGAQDLRVPVSNGLQYARALRE 787 (826)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------~~sp~~~~~~i--~~PvLii~G~~D~~vp~~~~~~~~~~l~~ 787 (826)
.. . ..+.. ........ ......+. ..+|... ..+ -+|+||+||+.|..+ .++..++++|++
T Consensus 203 ~~--~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~l~~lpP~li~~G~~D~~~--~~~~~~a~~l~~ 273 (317)
T 3qh4_A 203 AS--R-SEFRA---TPAFDGEAASLMWRHYLAGQTPSPESVPGRR-GQLAGLPATLITCGEIDPFR--DEVLDYAQRLLG 273 (317)
T ss_dssp HH--H-HHTTT---CSSSCHHHHHHHHHHHHTTCCCCTTTCGGGC-SCCTTCCCEEEEEEEESTTH--HHHHHHHHHHHH
T ss_pred cC--H-HHhcC---CCCcCHHHHHHHHHHhcCCCCCCcccCCCcc-cccCCCCceeEEecCcCCCc--hhHHHHHHHHHH
Confidence 00 0 00000 00000000 00011111 1122211 122 259999999999987 488899999999
Q ss_pred CCCCEEEEEeCCCCCCCCC----CCCHHHHHHHHHHHHHHHcC
Q 003363 788 KGVETKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 788 ~g~~~~~~~~p~~~H~~~~----~~~~~~~~~~i~~w~~~~l~ 826 (826)
.|+++++++||+++|++.. .+...+++..+.+||+++|.
T Consensus 274 ~g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 274 AGVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp TTCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 9999999999999998642 23446788999999999874
No 70
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.83 E-value=1.9e-20 Score=195.57 Aligned_cols=234 Identities=10% Similarity=0.019 Sum_probs=157.8
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH---HHHHHHHCCcEEEEECCCCCCCCchhh-------
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEA------- 639 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~Vl~~d~rG~~g~G~~~------- 639 (826)
...|.++...+|.|+++. .+++|+||++||++.. ...|.. ..+.+.+.||.|+++|+||.+......
T Consensus 23 ~~~g~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~--~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~~~~~~~~g 99 (278)
T 3e4d_A 23 ETLKSEMTFAVYVPPKAI-HEPCPVVWYLSGLTCT--HANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPDELTNWQMG 99 (278)
T ss_dssp TTTTEEEEEEEEECGGGG-TSCEEEEEEECCTTCC--SHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCCTTCTTSB
T ss_pred cccCCcceEEEEcCCCCC-CCCCCEEEEEcCCCCC--ccchhhcccHHHHHhhCCeEEEecCCcccCccccccccccccc
Confidence 345788999999998643 6789999999998755 334433 344566779999999999854321110
Q ss_pred -----hhcCCC-C-CCcchHH-HHH-HHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh
Q 003363 640 -----LQSLPG-K-VGSQDVN-DVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 710 (826)
Q Consensus 640 -----~~~~~~-~-~~~~~~~-D~~-~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~ 710 (826)
...... . ....... .+. ++++++.+...+|+++|+|+|||+||++++.++.++|++|+++++.+|+++...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~ 179 (278)
T 3e4d_A 100 KGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFAPIVAPSS 179 (278)
T ss_dssp TTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEESCCSCGGG
T ss_pred CCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEeCCcccccC
Confidence 000000 0 0011222 222 456666666557889999999999999999999999999999999999887542
Q ss_pred hccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCC--CCcEEEEEeCCCCCCCcHH-HHHHHHHHHh
Q 003363 711 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV--KTPTIFLLGAQDLRVPVSN-GLQYARALRE 787 (826)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~PvLii~G~~D~~vp~~~-~~~~~~~l~~ 787 (826)
... ....+...++. . ...+...+|...+.++ .+|+|++||++|..+|... +..++++|++
T Consensus 180 ~~~----~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~~l~~ 242 (278)
T 3e4d_A 180 ADW----SEPALEKYLGA---------D----RAAWRRYDACSLVEDGARFPEFLIDQGKADSFLEKGLRPWLFEEAIKG 242 (278)
T ss_dssp CTT----THHHHHHHHCS---------C----GGGGGGGCHHHHHHTTCCCSEEEEEEETTCTTHHHHTCTHHHHHHHTT
T ss_pred Ccc----chhhHHHhcCC---------c----HHHHHhcChhhHhhcCCCCCcEEEEecCCCcccccchhHHHHHHHHHH
Confidence 110 00000111111 0 1123344555444444 4699999999999997532 6889999999
Q ss_pred CCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 788 KGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 788 ~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
.|++++++++||++|.+.. .......+++|+.++|+
T Consensus 243 ~g~~~~~~~~~g~~H~~~~---~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 243 TDIGLTLRMHDRYDHSYYF---ISTFMDDHLKWHAERLG 278 (278)
T ss_dssp SSCEEEEEEETTCCSSHHH---HHHHHHHHHHHHHHHHC
T ss_pred cCCCceEEEeCCCCcCHHH---HHHHHHHHHHHHHHhcC
Confidence 9999999999999998642 23567788999999885
No 71
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.83 E-value=1.1e-20 Score=187.86 Aligned_cols=189 Identities=15% Similarity=0.139 Sum_probs=133.5
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHH---c
Q 003363 589 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVID---M 665 (826)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~---~ 665 (826)
.+..++||++||.+.. ...|...++.|...|+.|++||.+|.+.|+..+.... ......+++..+.++.+++ .
T Consensus 19 ~~a~~~Vv~lHG~G~~--~~~~~~l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~ 94 (210)
T 4h0c_A 19 QRAKKAVVMLHGRGGT--AADIISLQKVLKLDEMAIYAPQATNNSWYPYSFMAPV--QQNQPALDSALALVGEVVAEIEA 94 (210)
T ss_dssp TTCSEEEEEECCTTCC--HHHHHGGGGTSSCTTEEEEEECCGGGCSSSSCTTSCG--GGGTTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEEeCCCCC--HHHHHHHHHHhCCCCeEEEeecCCCCCccccccCCCc--ccchHHHHHHHHHHHHHHHHHHH
Confidence 4567899999995433 3345555666777899999999988655443322111 1111223444444443332 2
Q ss_pred CCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHH
Q 003363 666 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTR 745 (826)
Q Consensus 666 ~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (826)
..+|++||+|+|+|+||++++.++.++|++++++|+.++....... ....
T Consensus 95 ~~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~---------------------------~~~~--- 144 (210)
T 4h0c_A 95 QGIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQEL---------------------------AIGN--- 144 (210)
T ss_dssp TTCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSC---------------------------CGGG---
T ss_pred hCCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhh---------------------------hhhh---
Confidence 3489999999999999999999999999999999988874310000 0000
Q ss_pred HhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 746 FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 746 ~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
......++|+|++||++|++||++.++++++.|++.|.++++++||+.+|.+. .+.++.+.+||.|
T Consensus 145 -------~~~~~~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~g~~v~~~~ypg~gH~i~-----~~el~~i~~wL~k 210 (210)
T 4h0c_A 145 -------YKGDFKQTPVFISTGNPDPHVPVSRVQESVTILEDMNAAVSQVVYPGRPHTIS-----GDEIQLVNNTILK 210 (210)
T ss_dssp -------CCBCCTTCEEEEEEEESCTTSCHHHHHHHHHHHHHTTCEEEEEEEETCCSSCC-----HHHHHHHHHTTTC
T ss_pred -------hhhhccCCceEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCcC-----HHHHHHHHHHHcC
Confidence 00112257999999999999999999999999999999999999999999885 3456778888754
No 72
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.83 E-value=4.1e-20 Score=196.64 Aligned_cols=231 Identities=18% Similarity=0.228 Sum_probs=157.0
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHHHC-CcEEEEECCCCCCCCchhhhhcCCCCCC
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la~~-G~~Vl~~d~rG~~g~G~~~~~~~~~~~~ 648 (826)
.+| .+.+.+|.|.+ ..+.|+||++|||++.. ....|...+..|+++ ||.|+++||||.+++. .
T Consensus 56 ~~g-~i~~~~~~p~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~-----------~ 120 (311)
T 2c7b_A 56 SGG-SIRARVYFPKK---AAGLPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYK-----------F 120 (311)
T ss_dssp TTE-EEEEEEEESSS---CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTCEEEEECCCCTTTSC-----------T
T ss_pred CCC-cEEEEEEecCC---CCCCcEEEEECCCcccCCChhhhHHHHHHHHHhcCCEEEEecCCCCCCCC-----------C
Confidence 344 89999999973 44579999999987422 244677788888875 9999999999965531 1
Q ss_pred cchHHHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHhCCC----ceeEEEecCCccchhhh--------cc
Q 003363 649 SQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQAPD----KFVAAAARNPLCNLALM--------VG 713 (826)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~~p~----~~~a~v~~~p~~~~~~~--------~~ 713 (826)
....+|+.++++++.+.. .+|+++|+|+|||+||.+++.++.++|+ .++++|+.+|+.++... ..
T Consensus 121 ~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~ 200 (311)
T 2c7b_A 121 PTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNMTGVPTASLVEFGV 200 (311)
T ss_dssp THHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCCSSCCCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCCccccccCCccHHH
Confidence 234789999999988752 3677899999999999999999987765 59999999998773110 00
Q ss_pred CCCCC-CchhhhhccCcCCccCCCCCChhhHHHHhhcCcccc-cCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCC
Q 003363 714 TTDIP-DWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISH-ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 791 (826)
Q Consensus 714 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~-~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~ 791 (826)
..... .......+. ..+...+. . ......+|+.. +..+ +|+|+++|+.|..++ +...++++++..|.+
T Consensus 201 ~~~~~~~~~~~~~~~----~~~~~~~~-~--~~~~~~~p~~~~l~~~-~P~lii~G~~D~~~~--~~~~~~~~l~~~g~~ 270 (311)
T 2c7b_A 201 AETTSLPIELMVWFG----RQYLKRPE-E--AYDFKASPLLADLGGL-PPALVVTAEYDPLRD--EGELYAYKMKASGSR 270 (311)
T ss_dssp CTTCSSCHHHHHHHH----HHHCSSTT-G--GGSTTTCGGGSCCTTC-CCEEEEEETTCTTHH--HHHHHHHHHHHTTCC
T ss_pred hccCCCCHHHHHHHH----HHhCCCCc-c--ccCcccCcccccccCC-CcceEEEcCCCCchH--HHHHHHHHHHHCCCC
Confidence 00000 000000000 00000000 0 00011233322 2333 499999999999884 667888999999999
Q ss_pred EEEEEeCCCCCCCCC----CCCHHHHHHHHHHHHHHHcC
Q 003363 792 TKVIVFPNDVHGIER----PQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 792 ~~~~~~p~~~H~~~~----~~~~~~~~~~i~~w~~~~l~ 826 (826)
++++++++++|.+.. .+...++...+.+||+++++
T Consensus 271 ~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 309 (311)
T 2c7b_A 271 AVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQ 309 (311)
T ss_dssp EEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhc
Confidence 999999999998762 23345788999999999874
No 73
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.83 E-value=2.8e-20 Score=202.21 Aligned_cols=236 Identities=18% Similarity=0.171 Sum_probs=160.8
Q ss_pred eccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-Cc--cchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCC
Q 003363 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LS--SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 644 (826)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-~~--~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~ 644 (826)
+...+|..+.+.+|.|.+ ..++.|+||++|||++... .. .|......|+++||.|+++||||.+++..
T Consensus 87 ~~~~~g~~l~~~v~~p~~--~~~~~p~vv~iHGgg~~~g~~~~~~~~~~~~~la~~g~~vv~~d~r~~gg~~~------- 157 (361)
T 1jkm_A 87 ILGVDGNEITLHVFRPAG--VEGVLPGLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVMVDFRNAWTAEG------- 157 (361)
T ss_dssp EECTTSCEEEEEEEEETT--CCSCEEEEEEECCSTTTSSCSSSHHHHHHHHHHHHTTCEEEEEECCCSEETTE-------
T ss_pred eecCCCCeEEEEEEeCCC--CCCCCeEEEEEcCCccccCCCcccchhHHHHHHHhCCCEEEEEecCCCCCCCC-------
Confidence 344456689999999974 2237899999999874432 33 56667888988999999999999654321
Q ss_pred CCCCcchHHHHHHHHHHHHHcC-CCCCCcEEEEEecchHHHHHHHHHh-----CCCceeEEEecCCccchhhhcc----C
Q 003363 645 GKVGSQDVNDVLTAIDHVIDMG-LANPSKVTVVGGSHGGFLTTHLIGQ-----APDKFVAAAARNPLCNLALMVG----T 714 (826)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~-~~d~~rv~l~G~S~GG~~a~~~a~~-----~p~~~~a~v~~~p~~~~~~~~~----~ 714 (826)
.......+.|+.++++|+.++. ....++|+|+|||+||.+++.++.. +|++++++|+.+|+.+...... .
T Consensus 158 ~~~~~~~~~D~~~~~~~v~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~~~~~~~~~~~~~ 237 (361)
T 1jkm_A 158 HHPFPSGVEDCLAAVLWVDEHRESLGLSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHERRL 237 (361)
T ss_dssp ECCTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCCCCCTTSCHHHHH
T ss_pred CCCCCccHHHHHHHHHHHHhhHHhcCCCeEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcccccccccccccc
Confidence 1223445789999999998762 1122399999999999999999987 7889999999999876510000 0
Q ss_pred CCCCCchhhhhccCcCCccCCCCCChhhHH----HH---------hhcCcc----cccCCCCCcEEEEEeCCCCCCCcHH
Q 003363 715 TDIPDWCYVESYGSKGKDSFTESPSVEDLT----RF---------HSKSPI----SHISKVKTPTIFLLGAQDLRVPVSN 777 (826)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---------~~~sp~----~~~~~i~~PvLii~G~~D~~vp~~~ 777 (826)
.....+. .. .. .+ ....... .+ ...+|. ..+.++. |+||++|++|..++ +
T Consensus 238 ~~~~~~~--~~-~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~l~-P~Lii~G~~D~~~~--~ 304 (361)
T 1jkm_A 238 TELPSLV--EN-DG----YF---IENGGMALLVRAYDPTGEHAEDPIAWPYFASEDELRGLP-PFVVAVNELDPLRD--E 304 (361)
T ss_dssp HHCTHHH--HT-TT----SS---SCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHHTTCC-CEEEEEETTCTTHH--H
T ss_pred ccCcchh--hc-cC----cc---cCHHHHHHHHHHhCCCCCCCCCcccCccccChhhHcCCC-ceEEEEcCcCcchh--h
Confidence 0000000 00 00 00 0000000 00 012333 2345555 99999999999986 8
Q ss_pred HHHHHHHHHhCCCCEEEEEeCCCCCCCC-CC----CCH-HHHHHHHHHHHHHHc
Q 003363 778 GLQYARALREKGVETKVIVFPNDVHGIE-RP----QSD-FESFLNIGLWFKKYC 825 (826)
Q Consensus 778 ~~~~~~~l~~~g~~~~~~~~p~~~H~~~-~~----~~~-~~~~~~i~~w~~~~l 825 (826)
+..++++|++.|++++++++++++|.+. .. ... .++++.+.+||+++.
T Consensus 305 ~~~~~~~l~~~g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 305 GIAFARRLARAGVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 8899999999999999999999999876 21 222 577889999998863
No 74
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.83 E-value=1.1e-19 Score=184.34 Aligned_cols=210 Identities=15% Similarity=0.070 Sum_probs=154.9
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCC---------
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGK--------- 646 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~--------- 646 (826)
+..+++.|.+ +.|+||++||.+.. ...|...+..|+++||.|+++|+||.+...... ....
T Consensus 13 ~~~~~~~~~~-----~~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~---~~~~~~~~~~~~~ 82 (238)
T 1ufo_A 13 LSVLARIPEA-----PKALLLALHGLQGS--KEHILALLPGYAERGFLLLAFDAPRHGEREGPP---PSSKSPRYVEEVY 82 (238)
T ss_dssp EEEEEEEESS-----CCEEEEEECCTTCC--HHHHHHTSTTTGGGTEEEEECCCTTSTTSSCCC---CCTTSTTHHHHHH
T ss_pred EEEEEEecCC-----CccEEEEECCCccc--chHHHHHHHHHHhCCCEEEEecCCCCccCCCCC---CcccccchhhhHH
Confidence 4455777752 67999999997654 345666667788899999999999954432111 0000
Q ss_pred -CCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhh
Q 003363 647 -VGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 725 (826)
Q Consensus 647 -~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~ 725 (826)
......+|+.++++++.+.+. ++++++|||+||.+++.++.++|+.++++++.++...... ....
T Consensus 83 ~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~-------~~~~---- 148 (238)
T 1ufo_A 83 RVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKL-------PQGQ---- 148 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCC-------CTTC----
T ss_pred HHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchh-------hhhh----
Confidence 011236788888888877652 7899999999999999999999999999888776432110 0000
Q ss_pred ccCcCCccCCCCCChhhHHHHhhcCcccccCCC-CCcEEEEEeCCCCCCCcHHHHHHHHHHH-hCCC-CEEEEEeCCCCC
Q 003363 726 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKV-KTPTIFLLGAQDLRVPVSNGLQYARALR-EKGV-ETKVIVFPNDVH 802 (826)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i-~~PvLii~G~~D~~vp~~~~~~~~~~l~-~~g~-~~~~~~~p~~~H 802 (826)
+ ..+ +....+...++...+.++ ++|+|+++|++|..+|++.+.++++.++ +.|. +++++++++++|
T Consensus 149 --------~-~~~--~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H 217 (238)
T 1ufo_A 149 --------V-VED--PGVLALYQAPPATRGEAYGGVPLLHLHGSRDHIVPLARMEKTLEALRPHYPEGRLARFVEEGAGH 217 (238)
T ss_dssp --------C-CCC--HHHHHHHHSCGGGCGGGGTTCCEEEEEETTCTTTTHHHHHHHHHHHGGGCTTCCEEEEEETTCCS
T ss_pred --------c-cCC--cccchhhcCChhhhhhhccCCcEEEEECCCCCccCcHHHHHHHHHHhhcCCCCceEEEEeCCCCc
Confidence 0 111 224455566777777888 8999999999999999999999999999 7777 899999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc
Q 003363 803 GIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 803 ~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
.+. .+..+.+.+||.++|
T Consensus 218 ~~~-----~~~~~~~~~~l~~~l 235 (238)
T 1ufo_A 218 TLT-----PLMARVGLAFLEHWL 235 (238)
T ss_dssp SCC-----HHHHHHHHHHHHHHH
T ss_pred ccH-----HHHHHHHHHHHHHHH
Confidence 875 356778999998876
No 75
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.83 E-value=1.7e-19 Score=179.81 Aligned_cols=191 Identities=11% Similarity=0.098 Sum_probs=139.8
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhh----------cCCCCCCc
Q 003363 580 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQ----------SLPGKVGS 649 (826)
Q Consensus 580 ~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~----------~~~~~~~~ 649 (826)
++.|. ...+.| ||++||.+.. ...|...++.|+ .||.|+++|.++..+.+..|.. ........
T Consensus 8 ~~~~~---~~~~~p-vv~lHG~g~~--~~~~~~~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~ 80 (209)
T 3og9_A 8 VFKAG---RKDLAP-LLLLHSTGGD--EHQLVEIAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLD 80 (209)
T ss_dssp EEECC---CTTSCC-EEEECCTTCC--TTTTHHHHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHH
T ss_pred EEeCC---CCCCCC-EEEEeCCCCC--HHHHHHHHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHH
Confidence 44454 345678 9999996654 446777777776 7999999995532111111110 00000111
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCc
Q 003363 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 729 (826)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (826)
...+++.+.++.+.+...+|+++++|+|||+||.+++.++.++|++++++|+.+|......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------- 141 (209)
T 3og9_A 81 EETDWLTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF------------------- 141 (209)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC-------------------
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc-------------------
Confidence 2345666677777666668889999999999999999999999999999999988543100
Q ss_pred CCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCC
Q 003363 730 GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 809 (826)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~ 809 (826)
.......++|+|++||++|..+|+++++++++.|++.+.++++++++ ++|.+.
T Consensus 142 ----------------------~~~~~~~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~-~gH~~~---- 194 (209)
T 3og9_A 142 ----------------------EQTVQLDDKHVFLSYAPNDMIVPQKNFGDLKGDLEDSGCQLEIYESS-LGHQLT---- 194 (209)
T ss_dssp ----------------------CCCCCCTTCEEEEEECTTCSSSCHHHHHHHHHHHHHTTCEEEEEECS-STTSCC----
T ss_pred ----------------------cccccccCCCEEEEcCCCCCccCHHHHHHHHHHHHHcCCceEEEEcC-CCCcCC----
Confidence 00123457899999999999999999999999999999999999998 799884
Q ss_pred HHHHHHHHHHHHHHH
Q 003363 810 DFESFLNIGLWFKKY 824 (826)
Q Consensus 810 ~~~~~~~i~~w~~~~ 824 (826)
.+....+.+||+++
T Consensus 195 -~~~~~~~~~~l~~~ 208 (209)
T 3og9_A 195 -QEEVLAAKKWLTET 208 (209)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhh
Confidence 35678899999875
No 76
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.83 E-value=1e-19 Score=184.14 Aligned_cols=195 Identities=13% Similarity=0.091 Sum_probs=143.5
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECC-------------------CCCCCCchhhh
Q 003363 580 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNY-------------------RGSLGFGEEAL 640 (826)
Q Consensus 580 ~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~-------------------rG~~g~G~~~~ 640 (826)
++.|+ ..++.|+||++||++.. ...|...+..|+++||.|+++|+ +|. .....
T Consensus 14 ~~~p~---~~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~-~~~~~-- 85 (232)
T 1fj2_A 14 AIVPA---ARKATAAVIFLHGLGDT--GHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGL-SPDSQ-- 85 (232)
T ss_dssp EEECC---SSCCSEEEEEECCSSSC--HHHHHHHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCC-STTCC--
T ss_pred cccCC---CCCCCceEEEEecCCCc--cchHHHHHHHHhcCCcEEEecCCCccccccccccccccccccccC-Ccccc--
Confidence 44565 35678999999997754 44566677777778999999854 442 10000
Q ss_pred hcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCc
Q 003363 641 QSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW 720 (826)
Q Consensus 641 ~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~ 720 (826)
..........+|+.++++++.+ ..+|.++++|+|||+||.+++.++.++|++++++|+.+|........
T Consensus 86 --~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~-------- 154 (232)
T 1fj2_A 86 --EDESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASF-------- 154 (232)
T ss_dssp --BCHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGS--------
T ss_pred --cccHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCccc--------
Confidence 0000011124566666666665 45788999999999999999999999999999999999876432110
Q ss_pred hhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCC--EEEEEeC
Q 003363 721 CYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE--TKVIVFP 798 (826)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~--~~~~~~p 798 (826)
. .....+.++++|+|+++|++|..+|++.+.++++.+++.+.+ +++++++
T Consensus 155 ------~----------------------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 206 (232)
T 1fj2_A 155 ------P----------------------QGPIGGANRDISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTYE 206 (232)
T ss_dssp ------C----------------------SSCCCSTTTTCCEEEEEETTCSSSCHHHHHHHHHHHHHHSCGGGEEEEEET
T ss_pred ------c----------------------ccccccccCCCCEEEEecCCCccCCHHHHHHHHHHHHHhCCCCceEEEEeC
Confidence 0 001234567899999999999999999999999999988855 9999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 799 NDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 799 ~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
+++|.+. .+..+.+.+||+++|+
T Consensus 207 ~~~H~~~-----~~~~~~i~~~l~~~l~ 229 (232)
T 1fj2_A 207 GMMHSSC-----QQEMMDVKQFIDKLLP 229 (232)
T ss_dssp TCCSSCC-----HHHHHHHHHHHHHHSC
T ss_pred CCCcccC-----HHHHHHHHHHHHHhcC
Confidence 9999883 3556899999999874
No 77
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.82 E-value=1.3e-19 Score=213.47 Aligned_cols=246 Identities=13% Similarity=0.095 Sum_probs=169.8
Q ss_pred ccCCCee--EEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-------------------C--------------------
Q 003363 569 TKGAQKP--FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-------------------L-------------------- 607 (826)
Q Consensus 569 ~~~~g~~--l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-------------------~-------------------- 607 (826)
...||.. +.+.+|.|++ .+++|+||..||...... .
T Consensus 179 ~~~DG~~d~L~a~l~~P~~---~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~ 255 (763)
T 1lns_A 179 SEQRGENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSHEIHVEQKLPQKLSAKAKEL 255 (763)
T ss_dssp TTCSSSCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSEECCCCCCCCCCCCCCCCCC
T ss_pred cCCCCCeeeEEEEEEecCC---CCcccEEEecCCcCCCCcccccccccccccccccccCccccccccccccccccccccc
Confidence 5678888 9999999984 478999998887332100 0
Q ss_pred -------ccc-----hHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcC---------
Q 003363 608 -------SSY-----SKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG--------- 666 (826)
Q Consensus 608 -------~~~-----~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~--------- 666 (826)
..| ....++|+++||+|+++|+||+++++.. ...++..+.+|+.++++|+..+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~-----~~~~~~~e~~D~~a~IdwL~~~~~~~~d~~~~ 330 (763)
T 1lns_A 256 PIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGF-----QTSGDYQQIYSMTAVIDWLNGRARAYTSRKKT 330 (763)
T ss_dssp CEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSC-----CCTTSHHHHHHHHHHHHHHTTSSCEESSTTCC
T ss_pred cccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCc-----CCCCCHHHHHHHHHHHHHHhhccccccccccc
Confidence 011 1345889999999999999997665433 22334457899999999998431
Q ss_pred -----CCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCC-------CCCCchhh----hhccCcC
Q 003363 667 -----LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT-------DIPDWCYV----ESYGSKG 730 (826)
Q Consensus 667 -----~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~-------~~~~~~~~----~~~~~~~ 730 (826)
..+.+||+++|+||||++++.+|+.+|+.++++|+.+|+.++...+... ..+.+... ..+....
T Consensus 331 ~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~~g~~~~~~~~l~~~~~~~~~ 410 (763)
T 1lns_A 331 HEIKASWANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSPGGFPGEDLDVLAALTYSRNL 410 (763)
T ss_dssp CEECCTTEEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCCTTCTTCCHHHHHHHHCGGGG
T ss_pred ccccccCCCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhcccCCchhhhHHhHHHHhhhc
Confidence 1345799999999999999999999999999999999988765432111 01111000 0000000
Q ss_pred ---------------Ccc-----CCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCC
Q 003363 731 ---------------KDS-----FTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGV 790 (826)
Q Consensus 731 ---------------~~~-----~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~ 790 (826)
... ....+. ....+...++...+++|++|+|++||..|..||+.++.++++++++ +.
T Consensus 411 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~w~~~s~~~~l~~I~~PvLii~G~~D~~vp~~~a~~l~~al~~-~~ 487 (763)
T 1lns_A 411 DGADFLKGNAEYEKRLAEMTAALDRKSGD--YNQFWHDRNYLINTDKVKADVLIVHGLQDWNVTPEQAYNFWKALPE-GH 487 (763)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHCTTTCC--CCHHHHTTBGGGGGGGCCSEEEEEEETTCCSSCTHHHHHHHHHSCT-TC
T ss_pred CcchhhhHHHHHHHHHHHHHhhhhhccCc--hhHHhhccChhhHhhcCCCCEEEEEECCCCCCChHHHHHHHHhhcc-CC
Confidence 000 000000 0123345677888999999999999999999999999999999987 66
Q ss_pred CEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 791 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 791 ~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
+.++++ ++++|.........++.+.+.+||++|||
T Consensus 488 ~~~l~i-~~~gH~~~~~~~~~~~~~~i~~Ffd~~Lk 522 (763)
T 1lns_A 488 AKHAFL-HRGAHIYMNSWQSIDFSETINAYFVAKLL 522 (763)
T ss_dssp CEEEEE-ESCSSCCCTTBSSCCHHHHHHHHHHHHHT
T ss_pred CeEEEE-eCCcccCccccchHHHHHHHHHHHHHHhc
Confidence 776655 56789864332223568899999999986
No 78
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.82 E-value=7.3e-20 Score=187.10 Aligned_cols=219 Identities=17% Similarity=0.138 Sum_probs=151.2
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCc-hhhhhcCCCCCCcchHHHHHHHHHHHHHcCCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFG-EEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 668 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G-~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 668 (826)
++.|+||++||.+.. ...|...+..|+++||.|+++|+||.+... ...... . ......+|+.++++++.+.
T Consensus 20 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~--~-~~~~~~~d~~~~i~~l~~~--- 91 (251)
T 3dkr_A 20 GTDTGVVLLHAYTGS--PNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTK--G-NPDIWWAESSAAVAHMTAK--- 91 (251)
T ss_dssp CSSEEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEECCCTTCSSSCTHHHHHH--C-CHHHHHHHHHHHHHHHHTT---
T ss_pred CCCceEEEeCCCCCC--HHHHHHHHHHHHHCCCEEEecCCCCCCCCChhhhcCc--c-cHHHHHHHHHHHHHHHHHh---
Confidence 356889999997655 457888899999999999999999965442 111110 0 1112257888888888766
Q ss_pred CCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhh------
Q 003363 669 NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVED------ 742 (826)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 742 (826)
.++++|+|||+||.+++.++.++|++++++++.+|............ ..+...+. ......+....
T Consensus 92 -~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~ 163 (251)
T 3dkr_A 92 -YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGF---LKYAEYMN----RLAGKSDESTQILAYLP 163 (251)
T ss_dssp -CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHH---HHHHHHHH----HHHTCCCCHHHHHHHHH
T ss_pred -cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHH---HHHHHHHH----hhcccCcchhhHHhhhH
Confidence 57999999999999999999999999999999998765321000000 00000000 00000000000
Q ss_pred --HHHHh--hcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 003363 743 --LTRFH--SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIG 818 (826)
Q Consensus 743 --~~~~~--~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~ 818 (826)
...+. .......+.++++|+|+++|++|..+|++.+..+++.+... .+++++++++++|.+.......++.+.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 242 (251)
T 3dkr_A 164 GQLAAIDQFATTVAADLNLVKQPTFIGQAGQDELVDGRLAYQLRDALINA-ARVDFHWYDDAKHVITVNSAHHALEEDVI 242 (251)
T ss_dssp HHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSBCTTHHHHHHHHCTTC-SCEEEEEETTCCSCTTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCCEEEEecCCCcccChHHHHHHHHHhcCC-CCceEEEeCCCCcccccccchhHHHHHHH
Confidence 00010 01123456788999999999999999999999999988764 56899999999999877766778999999
Q ss_pred HHHHHHc
Q 003363 819 LWFKKYC 825 (826)
Q Consensus 819 ~w~~~~l 825 (826)
+||++..
T Consensus 243 ~fl~~~~ 249 (251)
T 3dkr_A 243 AFMQQEN 249 (251)
T ss_dssp HHHHTTC
T ss_pred HHHHhhc
Confidence 9998753
No 79
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.82 E-value=2.5e-19 Score=213.81 Aligned_cols=311 Identities=12% Similarity=0.092 Sum_probs=187.7
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCC----
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN---- 176 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~---- 176 (826)
.+.+||||+ +++.. ....++++++. +++.++++...-. ....+..++|||||++|||.+..++
T Consensus 20 ~~~~s~dg~-~~~~~---------~d~~i~~~~~~--~g~~~~~~~~~~~-~~~~~~~~~~SpDg~~la~~~~~~~~~~~ 86 (719)
T 1z68_A 20 FPNWISGQE-YLHQS---------ADNNIVLYNIE--TGQSYTILSNRTM-KSVNASNYGLSPDRQFVYLESDYSKLWRY 86 (719)
T ss_dssp CCEESSSSE-EEEEC---------TTSCEEEEESS--SCCEEEEECHHHH-HTTTCSEEEECTTSSEEEEEEEEEECSSS
T ss_pred ccEECCCCe-EEEEc---------CCCCEEEEEcC--CCcEEEEEccccc-cccceeeEEECCCCCeEEEEecCceeEEe
Confidence 456689995 44432 12367887763 3344555433200 0013778999999999999876321
Q ss_pred -CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCC
Q 003363 177 -ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWK 254 (826)
Q Consensus 177 -~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (826)
...+++..+ .+++......+.... ..++|||||++|||++
T Consensus 87 s~~~~i~~~d~~~g~~~~~~~l~~~~----------~~~~~SPDG~~la~~~---------------------------- 128 (719)
T 1z68_A 87 SYTATYYIYDLSNGEFVRGNELPRPI----------QYLCWSPVGSKLAYVY---------------------------- 128 (719)
T ss_dssp CEEEEEEEEETTTTEECCSSCCCSSB----------CCEEECSSTTCEEEEE----------------------------
T ss_pred ecceEEEEEECCCCccccceecCccc----------ccceECCCCCEEEEEE----------------------------
Confidence 122454444 344431001122222 7899999999999973
Q ss_pred CcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCC------------------ccceEEEeeCCCCCccEEEEE
Q 003363 255 GQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL------------------SVGQVVWAPLNEGLHQYLVFV 316 (826)
Q Consensus 255 ~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~------------------~~~~~~wSPDg~~~~~~lvf~ 316 (826)
...|++||+.+|+.++++ ..+.. ....++|||||+. |+|.
T Consensus 129 -----------------~~~i~~~~~~~g~~~~l~-~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~----la~~ 186 (719)
T 1z68_A 129 -----------------QNNIYLKQRPGDPPFQIT-FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKF----LAYA 186 (719)
T ss_dssp -----------------TTEEEEESSTTSCCEECC-CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSE----EEEE
T ss_pred -----------------CCeEEEEeCCCCCcEEEe-cCCCcCCeEcccccceeeeecccCcccEEECCCCCE----EEEE
Confidence 147999999999888873 11111 1147999999999 9998
Q ss_pred eecCcc-eee--------------eeeee----ccCCCceEEEEcccccchhhhhhhhcCCCCCCcce---ec------C
Q 003363 317 GWSSET-RKL--------------GIKYC----YNRPCALYAVRVSLYKSEASELELKESSSEDLPVV---NL------T 368 (826)
Q Consensus 317 ~~~~~~-~~~--------------g~~~~----~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~L------t 368 (826)
+.+... +.. .+.|. .+....|+++|+ ++++.. ++ .
T Consensus 187 ~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~-----------------~~~~~~~~~~~~~~~~~~ 249 (719)
T 1z68_A 187 EFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDT-----------------TYPAYVGPQEVPVPAMIA 249 (719)
T ss_dssp EEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEES-----------------SCHHHHCCEECCCCHHHH
T ss_pred EECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEEC-----------------CCCCccceeEccCCccCC
Confidence 754321 100 00000 012237889998 555431 33 3
Q ss_pred CCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEe----CCCCCCCCcccceeeeeeeeeccCCCCCcccccC
Q 003363 369 ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID----WPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS 444 (826)
Q Consensus 369 ~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d----~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~ 444 (826)
.+......+.|||||+ +++...... ....+|+++| +.+++.+.+..... ...+. +..
T Consensus 250 ~~~~~~~~~~~SpD~~-~~~~~~~~~------~~~~~l~~~d~~~~~~~g~~~~~~~~~~-------~~~~~-----~~~ 310 (719)
T 1z68_A 250 SSDYYFSWLTWVTDER-VCLQWLKRV------QNVSVLSICDFREDWQTWDCPKTQEHIE-------ESRTG-----WAG 310 (719)
T ss_dssp TSCEEEEEEEESSSSE-EEEEEEESS------TTEEEEEEEEECSSSSSEECCGGGEEEE-------ECSSS-----CSS
T ss_pred CCcceEEEeEEeCCCe-EEEEEeccc------cCeEEEEEEcccCCCCCCceEEEEeccc-------ccCCc-----eEc
Confidence 3555678899999976 555543321 2346899999 77765544431000 00000 000
Q ss_pred --CCCCCccccCCCEEEEEEE-eCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeC---CCCCCeEEEE
Q 003363 445 --SILSNPWLSDGCTMLLSSI-WGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSS---PVDVPQVKYG 518 (826)
Q Consensus 445 --~~~~~~ws~Dg~~l~~~~~-~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~---~~~p~~l~~~ 518 (826)
....+.|+|||+.|++.+. ..+..+||.+|+.+++.++|+.....+....++ +++.+++.... ...-..||..
T Consensus 311 ~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~ 389 (719)
T 1z68_A 311 GFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRI 389 (719)
T ss_dssp SSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEE
T ss_pred cccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEE
Confidence 0126789999998887544 567789999999999999998766655555666 89999888865 1233567777
Q ss_pred eec
Q 003363 519 YFV 521 (826)
Q Consensus 519 ~~~ 521 (826)
++.
T Consensus 390 ~~~ 392 (719)
T 1z68_A 390 SIG 392 (719)
T ss_dssp ECS
T ss_pred eCC
Confidence 763
No 80
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.82 E-value=7.2e-20 Score=189.44 Aligned_cols=193 Identities=15% Similarity=0.157 Sum_probs=147.4
Q ss_pred CeeEEEEEEecCCCCCCCCCcEEEEEcCCCCC-CCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 573 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHS-VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 573 g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~-~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+..+...+|.|.+ ++.|+||++|||++. .....|...+..|+++||.|+++|+||++.+. ....
T Consensus 48 ~~~~~~~~~~p~~----~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~~~~~~~-----------~~~~ 112 (262)
T 2pbl_A 48 GDRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKSSWSHLAVGALSKGWAVAMPSYELCPEVR-----------ISEI 112 (262)
T ss_dssp STTCEEEEECCSS----SCSEEEEEECCSTTTSCCGGGCGGGGHHHHHTTEEEEEECCCCTTTSC-----------HHHH
T ss_pred CCCceEEEEccCC----CCCCEEEEEcCcccccCChHHHHHHHHHHHhCCCEEEEeCCCCCCCCC-----------hHHH
Confidence 3345556777863 678999999997632 33456777788999999999999999964321 1234
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhC------CCceeEEEecCCccchhhhccCCCCCCchhhhh
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 725 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~------p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~ 725 (826)
.+|+.++++++..+.. ++++|+|||+||.+++.++.++ |++++++|+.+|+.++....... ....
T Consensus 113 ~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~~------~~~~ 183 (262)
T 2pbl_A 113 TQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTS------MNEK 183 (262)
T ss_dssp HHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGST------THHH
T ss_pred HHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhhh------hhhh
Confidence 7899999999988753 7899999999999999999887 88999999999987754332110 0000
Q ss_pred ccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCC
Q 003363 726 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 805 (826)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~ 805 (826)
+. .....+...+|...+.++++|+|+++|++|..++++++..+++.++ ++++++++++|...
T Consensus 184 ~~-------------~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~-----~~~~~~~~~~H~~~ 245 (262)
T 2pbl_A 184 FK-------------MDADAAIAESPVEMQNRYDAKVTVWVGGAERPAFLDQAIWLVEAWD-----ADHVIAFEKHHFNV 245 (262)
T ss_dssp HC-------------CCHHHHHHTCGGGCCCCCSCEEEEEEETTSCHHHHHHHHHHHHHHT-----CEEEEETTCCTTTT
T ss_pred hC-------------CCHHHHHhcCcccccCCCCCCEEEEEeCCCCcccHHHHHHHHHHhC-----CeEEEeCCCCcchH
Confidence 00 1123445667877888899999999999999999999999999986 78999999999876
Q ss_pred CC
Q 003363 806 RP 807 (826)
Q Consensus 806 ~~ 807 (826)
..
T Consensus 246 ~~ 247 (262)
T 2pbl_A 246 IE 247 (262)
T ss_dssp TG
T ss_pred Hh
Confidence 43
No 81
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.82 E-value=4.6e-19 Score=175.77 Aligned_cols=194 Identities=16% Similarity=0.185 Sum_probs=148.9
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH--HHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCC
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK--SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 647 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~--~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~ 647 (826)
+.+|..+++++|.|.+ +.|+||++||++.. ...|.. .+..|+++||.|+++|+||.+. ++... ...
T Consensus 10 ~~~g~~l~~~~~~~~~-----~~~~vv~~hG~~~~--~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~---s~~~~--~~~ 77 (207)
T 3bdi_A 10 DVNGTRVFQRKMVTDS-----NRRSIALFHGYSFT--SMDWDKADLFNNYSKIGYNVYAPDYPGFGR---SASSE--KYG 77 (207)
T ss_dssp EETTEEEEEEEECCTT-----CCEEEEEECCTTCC--GGGGGGGTHHHHHHTTTEEEEEECCTTSTT---SCCCT--TTC
T ss_pred eeCCcEEEEEEEeccC-----CCCeEEEECCCCCC--ccccchHHHHHHHHhCCCeEEEEcCCcccc---cCccc--CCC
Confidence 3467889999998863 56899999997755 456777 8899999999999999999443 31100 011
Q ss_pred Ccc-hHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhc
Q 003363 648 GSQ-DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 726 (826)
Q Consensus 648 ~~~-~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 726 (826)
... ..+++.+.+..+++. ++.++++++|||+||.+++.++.++|++++++++.+|..... +
T Consensus 78 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~----------~------ 139 (207)
T 3bdi_A 78 IDRGDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVES----------L------ 139 (207)
T ss_dssp CTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCGG----------G------
T ss_pred CCcchHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCccccc----------h------
Confidence 222 577888888877776 455799999999999999999999999999999998852100 0
Q ss_pred cCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCC
Q 003363 727 GSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER 806 (826)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~ 806 (826)
...+.++++|+|+++|++|..++++....+.+.+. +++++++++++|.+..
T Consensus 140 -------------------------~~~~~~~~~p~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~~H~~~~ 190 (207)
T 3bdi_A 140 -------------------------KGDMKKIRQKTLLVWGSKDHVVPIALSKEYASIIS----GSRLEIVEGSGHPVYI 190 (207)
T ss_dssp -------------------------HHHHTTCCSCEEEEEETTCTTTTHHHHHHHHHHST----TCEEEEETTCCSCHHH
T ss_pred -------------------------hHHHhhccCCEEEEEECCCCccchHHHHHHHHhcC----CceEEEeCCCCCCccc
Confidence 12345678999999999999999999988888774 4789999999998653
Q ss_pred CCCHHHHHHHHHHHHHH
Q 003363 807 PQSDFESFLNIGLWFKK 823 (826)
Q Consensus 807 ~~~~~~~~~~i~~w~~~ 823 (826)
.. ..++.+.+.+||++
T Consensus 191 ~~-~~~~~~~i~~fl~~ 206 (207)
T 3bdi_A 191 EK-PEEFVRITVDFLRN 206 (207)
T ss_dssp HS-HHHHHHHHHHHHHT
T ss_pred cC-HHHHHHHHHHHHhh
Confidence 33 44677888888864
No 82
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=3.9e-18 Score=178.59 Aligned_cols=263 Identities=14% Similarity=0.141 Sum_probs=180.4
Q ss_pred cceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cC-CceeEEEecCCCcc
Q 003363 124 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQ-SQLEKEFHVPQTVH 201 (826)
Q Consensus 124 ~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~-~~~~~~~~~~~~~~ 201 (826)
.....|+++++. +++.+.+.... ..+..++|||||++|++..+. .++.++ .+ ++..++.... ..
T Consensus 19 ~~~~~i~~~d~~--~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~-----~i~~~d~~~~~~~~~~~~~~--~~ 84 (297)
T 2ojh_A 19 SMRSSIEIFNIR--TRKMRVVWQTP-----ELFEAPNWSPDGKYLLLNSEG-----LLYRLSLAGDPSPEKVDTGF--AT 84 (297)
T ss_dssp CCCEEEEEEETT--TTEEEEEEEES-----SCCEEEEECTTSSEEEEEETT-----EEEEEESSSCCSCEECCCTT--CC
T ss_pred CcceeEEEEeCC--CCceeeeccCC-----cceEeeEECCCCCEEEEEcCC-----eEEEEeCCCCCCceEecccc--cc
Confidence 355677777653 33344444333 458899999999999997532 355444 34 4444443221 11
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEcc
Q 003363 202 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 281 (826)
Q Consensus 202 g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~ 281 (826)
+. +..+.|||||++|++...... ....||++++.
T Consensus 85 ~~------~~~~~~spdg~~l~~~~~~~~----------------------------------------~~~~l~~~~~~ 118 (297)
T 2ojh_A 85 IC------NNDHGISPDGALYAISDKVEF----------------------------------------GKSAIYLLPST 118 (297)
T ss_dssp CB------CSCCEECTTSSEEEEEECTTT----------------------------------------SSCEEEEEETT
T ss_pred cc------ccceEECCCCCEEEEEEeCCC----------------------------------------CcceEEEEECC
Confidence 12 268999999999999864321 24789999999
Q ss_pred CCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCC
Q 003363 282 SGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 361 (826)
Q Consensus 282 ~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 361 (826)
+++.+.+. ... ....++|+|||+. |+|++... ....||.+++ .+
T Consensus 119 ~~~~~~~~--~~~-~~~~~~~spdg~~----l~~~~~~~------------~~~~l~~~~~-----------------~~ 162 (297)
T 2ojh_A 119 GGTPRLMT--KNL-PSYWHGWSPDGKS----FTYCGIRD------------QVFDIYSMDI-----------------DS 162 (297)
T ss_dssp CCCCEECC--SSS-SEEEEEECTTSSE----EEEEEEET------------TEEEEEEEET-----------------TT
T ss_pred CCceEEee--cCC-CccceEECCCCCE----EEEEECCC------------CceEEEEEEC-----------------CC
Confidence 98888773 222 3667899999998 99877322 2236888887 67
Q ss_pred CcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCccc
Q 003363 362 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 441 (826)
Q Consensus 362 ~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~ 441 (826)
++.+.++........+.|||||++|++.+..+ +...||.++..++....+.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~----------------- 217 (297)
T 2ojh_A 163 GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRT--------GQMQIWRVRVDGSSVERITDSAY----------------- 217 (297)
T ss_dssp CCEEECCCSSSCEEEEEECTTSSEEEEEECTT--------SSCEEEEEETTSSCEEECCCCSE-----------------
T ss_pred CcceEcccCCCccccceECCCCCEEEEEecCC--------CCccEEEECCCCCCcEEEecCCc-----------------
Confidence 77788887777788999999999999887643 34678888876644433322111
Q ss_pred ccCCCCCCccccCCCEEEEEEEeC--------CeEEEEEEECCCCcEEEecC---CCCCeeeEEEeecCCEEEEEEeCCC
Q 003363 442 YSSSILSNPWLSDGCTMLLSSIWG--------SSQVIISVNVSSGELLRITP---AESNFSWSLLTLDGDNIIAVSSSPV 510 (826)
Q Consensus 442 ~~~~~~~~~ws~Dg~~l~~~~~~~--------~~~~l~~vdl~tg~~~~lt~---~~~~~~~~~~s~dg~~l~~~~s~~~ 510 (826)
....+.|+|||+.|++.+... ....|+.+|+.+++.+.+.. ....+....|+++++.|++......
T Consensus 218 ---~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 218 ---GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp ---EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECCC
T ss_pred ---ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEeccC
Confidence 123568999999998887654 34789999999998776653 2334455678999999988876643
No 83
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.81 E-value=3.7e-19 Score=178.14 Aligned_cols=197 Identities=15% Similarity=0.152 Sum_probs=142.0
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHH--CCcEEEEECCCCC-----CCCc-hhhhhc---C-CCCC
Q 003363 580 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGS-----LGFG-EEALQS---L-PGKV 647 (826)
Q Consensus 580 ~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~--~G~~Vl~~d~rG~-----~g~G-~~~~~~---~-~~~~ 647 (826)
++.|+ ..++.|+||++||++.. ...|...+..|++ +||.|+++|++|. .+++ ..|.+. . ....
T Consensus 5 ~~~~~---~~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~ 79 (218)
T 1auo_A 5 LILQP---AKPADACVIWLHGLGAD--RYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSI 79 (218)
T ss_dssp EEECC---SSCCSEEEEEECCTTCC--TTTTHHHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCEE
T ss_pred eecCC---CCCCCcEEEEEecCCCC--hhhHHHHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCccccc
Confidence 34454 35678999999997755 4467788889988 9999999997741 1100 000000 0 0001
Q ss_pred Ccch----HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHH-hCCCceeEEEecCCccchhhhccCCCCCCchh
Q 003363 648 GSQD----VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG-QAPDKFVAAAARNPLCNLALMVGTTDIPDWCY 722 (826)
Q Consensus 648 ~~~~----~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~-~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~ 722 (826)
.... .+++.++++++.+ ..++.++++++|||+||.+++.++. ++|++++++|+.+|..... ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~------~~----- 147 (218)
T 1auo_A 80 SLEELEVSAKMVTDLIEAQKR-TGIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF------GD----- 147 (218)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC------CT-----
T ss_pred chHHHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc------hh-----
Confidence 1112 3445555555544 3478889999999999999999999 9999999999999976430 00
Q ss_pred hhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCC
Q 003363 723 VESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVH 802 (826)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H 802 (826)
.. . ....++++|+|+++|++|..+|++.++++++.+++.|.++++++++ ++|
T Consensus 148 ----~~--------~---------------~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH 199 (218)
T 1auo_A 148 ----EL--------E---------------LSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGH 199 (218)
T ss_dssp ----TC--------C---------------CCHHHHTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEES-CSS
T ss_pred ----hh--------h---------------hhhcccCCCEEEEEeCCCceecHHHHHHHHHHHHhCCCceEEEEec-CCC
Confidence 00 0 0013457899999999999999999999999999988899999999 999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 803 GIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 803 ~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
.+. .+..+.+.+||.++|+
T Consensus 200 ~~~-----~~~~~~~~~~l~~~l~ 218 (218)
T 1auo_A 200 EVL-----PQEIHDIGAWLAARLG 218 (218)
T ss_dssp SCC-----HHHHHHHHHHHHHHHC
T ss_pred ccC-----HHHHHHHHHHHHHHhC
Confidence 874 3567899999999875
No 84
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.81 E-value=1.5e-18 Score=183.81 Aligned_cols=239 Identities=13% Similarity=0.228 Sum_probs=150.2
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..+...++.+.. ..+..|+||++||++.. ...|...+..|+++||.|+++|+||.+..... ......
T Consensus 28 ~~~~~~~~~~~~~~--~~~~~p~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-------~~~~~~ 96 (315)
T 4f0j_A 28 QGQPLSMAYLDVAP--KKANGRTILLMHGKNFC--AGTWERTIDVLADAGYRVIAVDQVGFCKSSKP-------AHYQYS 96 (315)
T ss_dssp TTEEEEEEEEEECC--SSCCSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC-------SSCCCC
T ss_pred CCCCeeEEEeecCC--CCCCCCeEEEEcCCCCc--chHHHHHHHHHHHCCCeEEEeecCCCCCCCCC-------CccccC
Confidence 34445544444432 34667999999997755 45788899999999999999999995443211 112345
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCC---Cchh------
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIP---DWCY------ 722 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~---~~~~------ 722 (826)
.+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|.............. .+..
T Consensus 97 ~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (315)
T 4f0j_A 97 FQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTS 174 (315)
T ss_dssp HHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCCCHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhhhhHHHHhhcccCC
Confidence 77888888877776 455799999999999999999999999999999999864211100000000 0000
Q ss_pred ---hhh-----ccCcC-C----------ccCCCCCChh--------hHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCc
Q 003363 723 ---VES-----YGSKG-K----------DSFTESPSVE--------DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPV 775 (826)
Q Consensus 723 ---~~~-----~~~~~-~----------~~~~~~~~~~--------~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~ 775 (826)
... +.... . .......... ........+....+.++++|+|+++|++|..+|.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~lii~G~~D~~~p~ 254 (315)
T 4f0j_A 175 AEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRLQMPTLLLIGEKDNTAIG 254 (315)
T ss_dssp HHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCCCCTT
T ss_pred hHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccCCCCeEEEEecCCCcCcc
Confidence 000 00000 0 0000000000 0111122334456788999999999999999994
Q ss_pred HHH------------HHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 776 SNG------------LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 776 ~~~------------~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
.+. .+..+.+.+....+++++++++||.+... ...++.+.|.+||+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~-~p~~~~~~i~~fl~~~ 314 (315)
T 4f0j_A 255 KDAAPAELKARLGNYAQLGKDAARRIPQATLVEFPDLGHTPQIQ-APERFHQALLEGLQTQ 314 (315)
T ss_dssp GGGSCHHHHTTSCCHHHHHHHHHHHSTTEEEEEETTCCSCHHHH-SHHHHHHHHHHHHCC-
T ss_pred ccccccccccccccchhhhhHHHhhcCCceEEEeCCCCcchhhh-CHHHHHHHHHHHhccC
Confidence 332 33334444444568999999999986543 3457888899998753
No 85
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.81 E-value=1.1e-18 Score=176.01 Aligned_cols=184 Identities=20% Similarity=0.245 Sum_probs=139.4
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHH--CCcEEEEECCCCCC----------------CCchhhhhcCCCCCCc
Q 003363 588 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGSL----------------GFGEEALQSLPGKVGS 649 (826)
Q Consensus 588 ~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~--~G~~Vl~~d~rG~~----------------g~G~~~~~~~~~~~~~ 649 (826)
+.++.|+||++||++.. ...|...+..|++ +||.|+++|++|.+ ++|.+ .....
T Consensus 20 ~~~~~~~vv~lHG~~~~--~~~~~~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~------~~~~~ 91 (226)
T 3cn9_A 20 APNADACIIWLHGLGAD--RTDFKPVAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPA------RAIDE 91 (226)
T ss_dssp CTTCCEEEEEECCTTCC--GGGGHHHHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSST------TCBCH
T ss_pred CCCCCCEEEEEecCCCC--hHHHHHHHHHHhhcCCCcEEEeecCCCCccccCCCCcccccccccccccc------ccccc
Confidence 56778999999997754 4567788888988 99999999988521 12211 01112
Q ss_pred chHHH----HHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHH-hCCCceeEEEecCCccchhhhccCCCCCCchhhh
Q 003363 650 QDVND----VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG-QAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVE 724 (826)
Q Consensus 650 ~~~~D----~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~-~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~ 724 (826)
..+.+ +..+++.+.+ ..++.++|+|+|||+||.+++.++. ++|++++++|+.+|..+.....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~------------ 158 (226)
T 3cn9_A 92 DQLNASADQVIALIDEQRA-KGIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL------------ 158 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC------------
T ss_pred hhHHHHHHHHHHHHHHHHH-cCCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh------------
Confidence 22334 4444444433 2477889999999999999999999 9999999999999876432110
Q ss_pred hccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCC
Q 003363 725 SYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 804 (826)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~ 804 (826)
.. ...++++|+|+++|++|..+|++.+.++++.+++.|.++++++++ ++|.+
T Consensus 159 -----------------------~~----~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~gH~~ 210 (226)
T 3cn9_A 159 -----------------------AL----DERHKRIPVLHLHGSQDDVVDPALGRAAHDALQAQGVEVGWHDYP-MGHEV 210 (226)
T ss_dssp -----------------------CC----CTGGGGCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEES-CCSSC
T ss_pred -----------------------hh----cccccCCCEEEEecCCCCccCHHHHHHHHHHHHHcCCceeEEEec-CCCCc
Confidence 00 013467899999999999999999999999999988899999999 99987
Q ss_pred CCCCCHHHHHHHHHHHHHHHc
Q 003363 805 ERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 805 ~~~~~~~~~~~~i~~w~~~~l 825 (826)
. .+..+.+.+||+++|
T Consensus 211 ~-----~~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 211 S-----LEEIHDIGAWLRKRL 226 (226)
T ss_dssp C-----HHHHHHHHHHHHHHC
T ss_pred c-----hhhHHHHHHHHHhhC
Confidence 4 356788999999875
No 86
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.81 E-value=6.3e-19 Score=182.90 Aligned_cols=219 Identities=17% Similarity=0.213 Sum_probs=151.0
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
+.|+||++||.+.. ...|...+..|+++||.|+++|+||.+....... . ......++|+.++++++.+. .
T Consensus 39 ~~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~~~---~-~~~~~~~~d~~~~i~~l~~~----~ 108 (270)
T 3rm3_A 39 GPVGVLLVHGFTGT--PHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDME---R-TTFHDWVASVEEGYGWLKQR----C 108 (270)
T ss_dssp SSEEEEEECCTTCC--GGGTHHHHHHHHHTTCEEEECCCTTCSSCHHHHH---T-CCHHHHHHHHHHHHHHHHTT----C
T ss_pred CCeEEEEECCCCCC--hhHHHHHHHHHHHCCCEEEEeCCCCCCCCccccc---c-CCHHHHHHHHHHHHHHHHhh----C
Confidence 45999999997655 4568888999999999999999999554432211 1 11122367888888887765 5
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCC----CCCCchhhhhccCcCC------ccCCCCCCh
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT----DIPDWCYVESYGSKGK------DSFTESPSV 740 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~------~~~~~~~~~ 740 (826)
++++|+|||+||.+++.++.++|+ ++++|+.+|........... ....+. ..+..... ..+...+ .
T Consensus 109 ~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~ 184 (270)
T 3rm3_A 109 QTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYL--DSIGSDLKNPDVKELAYEKTP-T 184 (270)
T ss_dssp SEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEE--ECCCCCCSCTTCCCCCCSEEE-H
T ss_pred CcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHH--HHhCccccccchHhhcccccC-h
Confidence 789999999999999999999999 99999999977653322110 011110 00000000 0000000 1
Q ss_pred hhHHHHh--hcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 003363 741 EDLTRFH--SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIG 818 (826)
Q Consensus 741 ~~~~~~~--~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~ 818 (826)
.....+. .......+.++++|+|+++|++|..+|+..+..+++.++. .+++++++|+++|.+.......++.+.+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~~~~~~~~~~~i~ 262 (270)
T 3rm3_A 185 ASLLQLARLMAQTKAKLDRIVCPALIFVSDEDHVVPPGNADIIFQGISS--TEKEIVRLRNSYHVATLDYDQPMIIERSL 262 (270)
T ss_dssp HHHHHHHHHHHHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHSCC--SSEEEEEESSCCSCGGGSTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhhhcCCCEEEEECCCCcccCHHHHHHHHHhcCC--CcceEEEeCCCCcccccCccHHHHHHHHH
Confidence 1111111 0112245677899999999999999999999999888864 35799999999999876666568999999
Q ss_pred HHHHHHc
Q 003363 819 LWFKKYC 825 (826)
Q Consensus 819 ~w~~~~l 825 (826)
+||+++.
T Consensus 263 ~fl~~~~ 269 (270)
T 3rm3_A 263 EFFAKHA 269 (270)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9999875
No 87
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.81 E-value=1.3e-18 Score=186.26 Aligned_cols=220 Identities=15% Similarity=0.221 Sum_probs=152.0
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCC-CCccchHHHHHHH-HCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHH
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSV-SLSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 653 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~-~~~~~~~~~~~la-~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~ 653 (826)
+.++++.|.+ ++.|+||++|||++.. ....|...+..|+ +.||.|+++||||+++.. ....++
T Consensus 84 ~~~~~~~p~~----~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~-----------~~~~~~ 148 (326)
T 3d7r_A 84 MQVFRFNFRH----QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFH-----------IDDTFQ 148 (326)
T ss_dssp EEEEEEESTT----CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSC-----------HHHHHH
T ss_pred EEEEEEeeCC----CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCC-----------chHHHH
Confidence 5567788863 5679999999987543 2345566677776 569999999999965421 123478
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCc----eeEEEecCCccchhhhccCCCCCCchhhhhccCc
Q 003363 654 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTTDIPDWCYVESYGSK 729 (826)
Q Consensus 654 D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (826)
|+.+++++++++ ++.++|+|+|||+||.+++.++.++|+. ++++|+.+|+.+....... ... ..... ..
T Consensus 149 d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~--~~~-~~~~~-~~- 221 (326)
T 3d7r_A 149 AIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKD--ISD-ALIEQ-DA- 221 (326)
T ss_dssp HHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTT--CCH-HHHHH-CS-
T ss_pred HHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChh--HHh-hhccc-Cc-
Confidence 999999999988 6789999999999999999999887766 9999999998765321100 000 00000 00
Q ss_pred CCccCCCCCChhh----HHHHh--------hcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEe
Q 003363 730 GKDSFTESPSVED----LTRFH--------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 797 (826)
Q Consensus 730 ~~~~~~~~~~~~~----~~~~~--------~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 797 (826)
. ..... ...+. ..+|+...-...+|+|+++|++|. +..++..+.+++++.+.+++++++
T Consensus 222 ----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~--~~~~~~~~~~~l~~~~~~~~~~~~ 292 (326)
T 3d7r_A 222 ----V---LSQFGVNEIMKKWANGLPLTDKRISPINGTIEGLPPVYMFGGGREM--THPDMKLFEQMMLQHHQYIEFYDY 292 (326)
T ss_dssp ----S---CCHHHHHHHHHHHHTTSCTTSTTTSGGGSCCTTCCCEEEEEETTST--THHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ----c---cCHHHHHHHHHHhcCCCCCCCCeECcccCCcccCCCEEEEEeCccc--chHHHHHHHHHHHHCCCcEEEEEe
Confidence 0 00000 00110 122322111122699999999996 446788899999999999999999
Q ss_pred CCCCCCCCC--CCCHHHHHHHHHHHHHHHcC
Q 003363 798 PNDVHGIER--PQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 798 p~~~H~~~~--~~~~~~~~~~i~~w~~~~l~ 826 (826)
|+++|.+.. .+...++...+.+||+++++
T Consensus 293 ~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 293 PKMVHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp TTCCTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 999998765 24445788999999988763
No 88
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.80 E-value=1.6e-19 Score=186.74 Aligned_cols=231 Identities=13% Similarity=0.058 Sum_probs=150.2
Q ss_pred CCCeeEEEEEEecCCCC----CCCCCcEEEEEcCCCCCCCCccchH--HHHHH-HHCCcEEEEECCCCCCCCchhhhhcC
Q 003363 571 GAQKPFEAIFVSSSHKK----DCSCDPLIVVLHGGPHSVSLSSYSK--SLAFL-SSVGYSLLIVNYRGSLGFGEEALQSL 643 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~----~~~~~P~vv~~HGg~~~~~~~~~~~--~~~~l-a~~G~~Vl~~d~rG~~g~G~~~~~~~ 643 (826)
..+..+.+.+|.|++++ +.+++|+||++||++.. ...|.. .+..+ ++.||.|+.+|+++++......
T Consensus 16 ~~~~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---- 89 (263)
T 2uz0_A 16 VLDMEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGN--HNSWLKRTNVERLLRGTNLIVVMPNTSNGWYTDTQY---- 89 (263)
T ss_dssp TTTEEEEEEEEECC---------CCBCEEEEECCTTCC--TTHHHHHSCHHHHTTTCCCEEEECCCTTSTTSBCTT----
T ss_pred hhCCceeEEEEeCCCccccCCcCCCCCEEEEECCCCCC--HHHHHhccCHHHHHhcCCeEEEEECCCCCccccCCC----
Confidence 35678999999998752 35789999999998755 334544 34444 5589999999998854321100
Q ss_pred CCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCC-CCchh
Q 003363 644 PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI-PDWCY 722 (826)
Q Consensus 644 ~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~-~~~~~ 722 (826)
.........+|+...++.+..+..+|+++++|+|||+||++++.++. +|++++++++.+|..+...+...... ....+
T Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 2uz0_A 90 GFDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNFSPESQNLGSPAY 168 (263)
T ss_dssp SCBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSCCGGGTTCSCHHH
T ss_pred cccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhccccccccccchh
Confidence 00111111344555555443323467899999999999999999999 99999999999998765432110000 00000
Q ss_pred h-hhccCcCCccCCCCCChhhHHHHhhcCcccccCCCC--CcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 003363 723 V-ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVK--TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 799 (826)
Q Consensus 723 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~--~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~ 799 (826)
. ..++. .. ...+...+|...+.++. +|+|++||++|..+ ..++.+++++++.|.++++++++|
T Consensus 169 ~~~~~~~---------~~---~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~v--~~~~~~~~~l~~~g~~~~~~~~~g 234 (263)
T 2uz0_A 169 WRGVFGE---------IR---DWTTSPYSLESLAKKSDKKTKLWAWCGEQDFLY--EANNLAVKNLKKLGFDVTYSHSAG 234 (263)
T ss_dssp HHHHHCC---------CS---CTTTSTTSHHHHGGGCCSCSEEEEEEETTSTTH--HHHHHHHHHHHHTTCEEEEEEESC
T ss_pred HHHHcCC---------hh---hhccccCCHHHHHHhccCCCeEEEEeCCCchhh--HHHHHHHHHHHHCCCCeEEEECCC
Confidence 0 00110 00 01122345555555554 79999999999988 467899999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 800 DVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 800 ~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
+|.+.. ..+.+..+++||.++++
T Consensus 235 -~H~~~~---~~~~~~~~~~~l~~~l~ 257 (263)
T 2uz0_A 235 -THEWYY---WEKQLEVFLTTLPIDFK 257 (263)
T ss_dssp -CSSHHH---HHHHHHHHHHHSSSCCC
T ss_pred -CcCHHH---HHHHHHHHHHHHHhhcc
Confidence 997631 23667889999988764
No 89
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.80 E-value=1.8e-19 Score=188.72 Aligned_cols=230 Identities=13% Similarity=0.091 Sum_probs=153.0
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch---HHHHHHHHCCcEEEEECC--CCCC---------CC
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS---KSLAFLSSVGYSLLIVNY--RGSL---------GF 635 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~---~~~~~la~~G~~Vl~~d~--rG~~---------g~ 635 (826)
...|.++...+|.|++++ .+++|+||++||++... ..|. .....+++.||.|+++|. ||.+ |.
T Consensus 30 ~~~~~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~--~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~~~~~~G~ 106 (283)
T 4b6g_A 30 QTLQCEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTE--QNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDDAYDLGQ 106 (283)
T ss_dssp TTTTEEEEEEEEECCCTT-CCCEEEEEEECCTTCCS--HHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCCSSTTSBT
T ss_pred hhhCCceEEEEEeCCCCC-CCCCCEEEEEcCCCCCc--cchhhcccHHHHHhhCCeEEEEeccccccccccccccccccC
Confidence 445788999999998754 67899999999987553 2332 234667788999999995 4432 12
Q ss_pred chhhhhcCCC-CCC-cch-HHHHH-HHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhh
Q 003363 636 GEEALQSLPG-KVG-SQD-VNDVL-TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM 711 (826)
Q Consensus 636 G~~~~~~~~~-~~~-~~~-~~D~~-~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~ 711 (826)
|..+....+. .+. ... ...+. +.+.++.+.. -+.+|++|+|||+||++++.++.++|++|+++++.+|+++....
T Consensus 107 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~~~~~~~ 185 (283)
T 4b6g_A 107 SAGFYLNATEQPWAANYQMYDYILNELPRLIEKHF-PTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPILSPSLV 185 (283)
T ss_dssp TBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHS-CEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCCCCGGGS
T ss_pred CCcccccCccCcccchhhHHHHHHHHHHHHHHHhC-CCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCccccccC
Confidence 2221111110 110 111 22222 3344444443 24689999999999999999999999999999999998764321
Q ss_pred ccCCCCCCch---hhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCC--CCcEEEEEeCCCCCCCcH-HHHHHHHHH
Q 003363 712 VGTTDIPDWC---YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKV--KTPTIFLLGAQDLRVPVS-NGLQYARAL 785 (826)
Q Consensus 712 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i--~~PvLii~G~~D~~vp~~-~~~~~~~~l 785 (826)
. |. +...++. ....+...+|...+.++ .+|+|++||+.|.+++.. ++.+++++|
T Consensus 186 ~-------~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~~~p~li~~G~~D~~~~~~~~~~~~~~~l 245 (283)
T 4b6g_A 186 P-------WGEKAFTAYLGK-------------DREKWQQYDANSLIQQGYKVQGMRIDQGLEDEFLPTQLRTEDFIETC 245 (283)
T ss_dssp H-------HHHHHHHHHHCS-------------CGGGGGGGCHHHHHHHTCCCSCCEEEEETTCTTHHHHTCHHHHHHHH
T ss_pred c-------chhhhHHhhcCC-------------chHHHHhcCHHHHHHhcccCCCEEEEecCCCccCcchhhHHHHHHHH
Confidence 0 10 0011111 00122334454444443 469999999999999762 288999999
Q ss_pred HhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 786 REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 786 ~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
++.|++++++++||++|.+.. .......+++|+.++|+
T Consensus 246 ~~~g~~~~~~~~~g~~H~~~~---~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 246 RAANQPVDVRFHKGYDHSYYF---IASFIGEHIAYHAAFLK 283 (283)
T ss_dssp HHHTCCCEEEEETTCCSSHHH---HHHHHHHHHHHHHTTCC
T ss_pred HHcCCCceEEEeCCCCcCHhH---HHHHHHHHHHHHHHhcC
Confidence 999999999999999998631 23566789999999885
No 90
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.80 E-value=7.4e-18 Score=209.29 Aligned_cols=329 Identities=12% Similarity=0.032 Sum_probs=212.9
Q ss_pred ceEEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceeccc-------EEEEeCCCCCeEE
Q 003363 97 KAWTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGA-------SAVVPSPSGSKLL 169 (826)
Q Consensus 97 ~~~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~-------~~~~~SPdG~~la 169 (826)
.....+.+||||++|+|...... ......||++++ .+++.++|+..+ ..+ ..++|||||+ ++
T Consensus 53 ~~v~~~~~SPDG~~la~~s~~~~---~~~~~~i~~~d~--~~g~~~~lt~~~-----~~~~~~~~~~~~~~~SpDg~-ll 121 (1045)
T 1k32_A 53 GVINNARFFPDGRKIAIRVMRGS---SLNTADLYFYNG--ENGEIKRITYFS-----GKSTGRRMFTDVAGFDPDGN-LI 121 (1045)
T ss_dssp SEEEEEEECTTSSEEEEEEEEST---TCCEEEEEEEET--TTTEEEECCCCC-----EEEETTEECSEEEEECTTCC-EE
T ss_pred CcccCeEECCCCCEEEEEEeecc---CCCCCeEEEEEC--CCCCeEEcccCC-----CcccccccccccccCCCCCE-EE
Confidence 34567778999999999865521 013567888876 344567776654 334 7899999998 77
Q ss_pred EEecCCC---CCCeEEEEe-cCCceeEEEec-------------------------------------------------
Q 003363 170 VVRNPEN---ESPIQFELW-SQSQLEKEFHV------------------------------------------------- 196 (826)
Q Consensus 170 ~~~~~~~---~~~~~~~i~-~~~~~~~~~~~------------------------------------------------- 196 (826)
|+...++ ...++|.+. .++...+++..
T Consensus 122 ~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~ 201 (1045)
T 1k32_A 122 ISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVD 201 (1045)
T ss_dssp EEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEEC
T ss_pred EEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcC
Confidence 8765431 233566555 33332221100
Q ss_pred -------------------CCCccccccC---C----------CcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCC
Q 003363 197 -------------------PQTVHGSVYA---D----------GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG 244 (826)
Q Consensus 197 -------------------~~~~~g~v~~---~----------~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~ 244 (826)
...-...+|. + ..+..++|||||++|+|..... ...|+.......
T Consensus 202 ~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~---i~~~d~~~~~l~ 278 (1045)
T 1k32_A 202 MSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGS---IYIFNPDTEKIE 278 (1045)
T ss_dssp CSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTE---EEEECTTTCCEE
T ss_pred CCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCE---EEEecCCceEee
Confidence 0000001110 0 1134678999999999975221 111211000000
Q ss_pred ----------CCCccCCCCCCcceee-cCCCccCCCccCceEEEEEccCCceEeccCCCCCC-ccceEEEeeCCCCCccE
Q 003363 245 ----------SSDKDCNSWKGQGDWE-EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL-SVGQVVWAPLNEGLHQY 312 (826)
Q Consensus 245 ----------~~~~~~~~~~~~~~~~-~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~-~~~~~~wSPDg~~~~~~ 312 (826)
.....+........|+ || |..++......|+++++.+++.+.+ ..... .+..++|+ ||+.
T Consensus 279 ~l~~~~~~~~~~~~~~~~~v~~~~~S~pd-G~~la~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~s-dg~~---- 350 (1045)
T 1k32_A 279 KIEIGDLESPEDRIISIPSKFAEDFSPLD-GDLIAFVSRGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGD-TKVA---- 350 (1045)
T ss_dssp ECCCCCCCBCCSEEEECGGGGEEEEEECG-GGCEEEEETTEEEEECTTSSBEEEC--SCCSCEEEEEECSS-SEEE----
T ss_pred eeccCcccccccccccccccceeeecCCC-CCEEEEEEcCEEEEEcCCCCceEEc--cCCCcceEEeeeEc-CCCe----
Confidence 0000112234567799 88 4444444478899999999988887 33333 67789999 9998
Q ss_pred EEEEeecCcceeeeeeeeccCCCceE-EEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEec
Q 003363 313 LVFVGWSSETRKLGIKYCYNRPCALY-AVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 391 (826)
Q Consensus 313 lvf~~~~~~~~~~g~~~~~~~~~~l~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~ 391 (826)
|+|.+. ...|| ++|+ .+++.+.++.+......+.|||||++|++.+.
T Consensus 351 l~~~s~---------------~~~l~~~~d~-----------------~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~ 398 (1045)
T 1k32_A 351 FIHGTR---------------EGDFLGIYDY-----------------RTGKAEKFEENLGNVFAMGVDRNGKFAVVAND 398 (1045)
T ss_dssp EEEEET---------------TEEEEEEEET-----------------TTCCEEECCCCCCSEEEEEECTTSSEEEEEET
T ss_pred EEEEEC---------------CCceEEEEEC-----------------CCCCceEecCCccceeeeEECCCCCEEEEECC
Confidence 998873 23789 8998 77778888865567888999999999998875
Q ss_pred cCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeC------
Q 003363 392 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG------ 465 (826)
Q Consensus 392 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~------ 465 (826)
+ ..|++||+.+++.+.+.... ...+..++|||||++|++.+...
T Consensus 399 ~-----------~~v~~~d~~tg~~~~~~~~~-------------------~~~v~~~~~SpDG~~la~~~~~~~~~~~~ 448 (1045)
T 1k32_A 399 R-----------FEIMTVDLETGKPTVIERSR-------------------EAMITDFTISDNSRFIAYGFPLKHGETDG 448 (1045)
T ss_dssp T-----------SEEEEEETTTCCEEEEEECS-------------------SSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred C-----------CeEEEEECCCCceEEeccCC-------------------CCCccceEECCCCCeEEEEecCccccccC
Confidence 4 36999999886643322111 01235778999999998876643
Q ss_pred -CeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCC
Q 003363 466 -SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSP 509 (826)
Q Consensus 466 -~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~ 509 (826)
....|+.+|+++++...++..........|++||+.|++.....
T Consensus 449 ~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 449 YVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp CCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred CCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEeccc
Confidence 45789999999999888887665555678999999998877543
No 91
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.80 E-value=5.2e-19 Score=183.81 Aligned_cols=197 Identities=19% Similarity=0.209 Sum_probs=141.4
Q ss_pred EEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHC--CcEEEEECCCC---CCCCchhhhhc--CCCCCCc---
Q 003363 580 FVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRG---SLGFGEEALQS--LPGKVGS--- 649 (826)
Q Consensus 580 ~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~--G~~Vl~~d~rG---~~g~G~~~~~~--~~~~~~~--- 649 (826)
...|.. +++++|+||++||.+.. ...|....+.|+.+ ++.++.++-+. ..+.|..|... .......
T Consensus 56 ~~~p~~--~~~~~plVI~LHG~G~~--~~~~~~~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~~~~~~~~ 131 (285)
T 4fhz_A 56 GRRGAA--PGEATSLVVFLHGYGAD--GADLLGLAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDGSSETAAA 131 (285)
T ss_dssp EEEESC--TTCCSEEEEEECCTTBC--HHHHHTTHHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHCCCHHHHH
T ss_pred ecCCCC--CCCCCcEEEEEcCCCCC--HHHHHHHHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccCcccchhh
Confidence 444543 67889999999995433 33455556666543 88899987431 12234433110 0000001
Q ss_pred ----chHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhh
Q 003363 650 ----QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVES 725 (826)
Q Consensus 650 ----~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~ 725 (826)
....++.+.++.++++..+|++||+|+|+|+||++++.++.++|+.|+++|..++...
T Consensus 132 ~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~------------------ 193 (285)
T 4fhz_A 132 EGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLL------------------ 193 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCS------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCcc------------------
Confidence 1134566666777776679999999999999999999999999999999998876321
Q ss_pred ccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCC
Q 003363 726 YGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 805 (826)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~ 805 (826)
..+... ...+.++|+|++||++|.+||+++++++++.|+++|.++++++|++.||.+.
T Consensus 194 -------------~~~~~~---------~~~~~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~g~~~~~~~y~g~gH~i~ 251 (285)
T 4fhz_A 194 -------------APERLA---------EEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIA 251 (285)
T ss_dssp -------------CHHHHH---------HHCCCCCCEEEEEETTCSSSCTHHHHHHHHHHHHTTCCEEEEEETTCCSSCC
T ss_pred -------------Cchhhh---------hhhhhcCcccceeeCCCCCcCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
Confidence 001100 0123468999999999999999999999999999999999999999999875
Q ss_pred CCCCHHHHHHHHHHHHHHHc
Q 003363 806 RPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 806 ~~~~~~~~~~~i~~w~~~~l 825 (826)
.+.+..+.+||+++|
T Consensus 252 -----~~~l~~~~~fL~~~L 266 (285)
T 4fhz_A 252 -----PDGLSVALAFLKERL 266 (285)
T ss_dssp -----HHHHHHHHHHHHHHC
T ss_pred -----HHHHHHHHHHHHHHC
Confidence 356788999999987
No 92
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.80 E-value=1.1e-18 Score=181.37 Aligned_cols=206 Identities=11% Similarity=-0.039 Sum_probs=145.5
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-----cchHHHHHHHHC----CcEEEEECCCCCCCCchhhhhc
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----SYSKSLAFLSSV----GYSLLIVNYRGSLGFGEEALQS 642 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-----~~~~~~~~la~~----G~~Vl~~d~rG~~g~G~~~~~~ 642 (826)
.+..+.+.+|.|++++..+++|+||++||++...... .+...+..|+++ ||.|+.+|+++.+.. .
T Consensus 42 ~~~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~~~~~~---~--- 115 (268)
T 1jjf_A 42 TNSTRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTNAAGPG---I--- 115 (268)
T ss_dssp TTEEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCCCCCTT---C---
T ss_pred cCCceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCCCCCcc---c---
Confidence 5678999999999876678899999999977543211 123346677776 599999999985321 0
Q ss_pred CCCCCCcchHHH-HHHHHHHHHHcCCC--CCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCC
Q 003363 643 LPGKVGSQDVND-VLTAIDHVIDMGLA--NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPD 719 (826)
Q Consensus 643 ~~~~~~~~~~~D-~~~~i~~l~~~~~~--d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~ 719 (826)
...+ ....++ +.++++++.++..+ |+++|+|+|||+||++++.++.++|++|+++++.+|..++..
T Consensus 116 -~~~~-~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~~~~~--------- 184 (268)
T 1jjf_A 116 -ADGY-ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYP--------- 184 (268)
T ss_dssp -SCHH-HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCTTSCC---------
T ss_pred -cccH-HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCCCCCc---------
Confidence 0011 011233 44566677665444 789999999999999999999999999999999998654311
Q ss_pred chhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCC-cEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeC
Q 003363 720 WCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKT-PTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 798 (826)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~-PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p 798 (826)
+ ...+.. .. .. ...+. |+|++||++|..+| .++++++.|++.|++++++++|
T Consensus 185 ~--~~~~~~---------~~-~~-------------~~~~~pp~li~~G~~D~~v~--~~~~~~~~l~~~g~~~~~~~~~ 237 (268)
T 1jjf_A 185 N--ERLFPD---------GG-KA-------------AREKLKLLFIACGTNDSLIG--FGQRVHEYCVANNINHVYWLIQ 237 (268)
T ss_dssp H--HHHCTT---------TT-HH-------------HHHHCSEEEEEEETTCTTHH--HHHHHHHHHHHTTCCCEEEEET
T ss_pred h--hhhcCc---------ch-hh-------------hhhcCceEEEEecCCCCCcc--HHHHHHHHHHHCCCceEEEEcC
Confidence 0 000000 00 00 01123 59999999999986 4778999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 799 NDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 799 ~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
+++|.+.. ..+.+..+++||.++
T Consensus 238 g~~H~~~~---~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 238 GGGHDFNV---WKPGLWNFLQMADEA 260 (268)
T ss_dssp TCCSSHHH---HHHHHHHHHHHHHHH
T ss_pred CCCcCHhH---HHHHHHHHHHHHHhc
Confidence 99998742 235567888999875
No 93
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.80 E-value=8.3e-19 Score=176.58 Aligned_cols=197 Identities=16% Similarity=0.125 Sum_probs=142.7
Q ss_pred eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcC-CCC----CC
Q 003363 574 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL-PGK----VG 648 (826)
Q Consensus 574 ~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~-~~~----~~ 648 (826)
.+++..++.|. ..+.|+||++||++.. ...|......|++ ||.|+++|.++..+.|..+.... ... ..
T Consensus 16 ~~l~~~~~~~~----~~~~p~vv~lHG~g~~--~~~~~~~~~~l~~-~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~~ 88 (223)
T 3b5e_A 16 LAFPYRLLGAG----KESRECLFLLHGSGVD--ETTLVPLARRIAP-TATLVAARGRIPQEDGFRWFERIDPTRFEQKSI 88 (223)
T ss_dssp SSSCEEEESTT----SSCCCEEEEECCTTBC--TTTTHHHHHHHCT-TSEEEEECCSEEETTEEESSCEEETTEECHHHH
T ss_pred CCceEEEeCCC----CCCCCEEEEEecCCCC--HHHHHHHHHhcCC-CceEEEeCCCCCcCCccccccccCCCcccHHHH
Confidence 34555555443 2334999999997655 3467777777765 99999999876422222221100 000 01
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccC
Q 003363 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 728 (826)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 728 (826)
....+++.+.++++.++..+|.++++|+|||+||.+++.++.++|++++++|+.+|..... .
T Consensus 89 ~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~------------------~ 150 (223)
T 3b5e_A 89 LAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD------------------H 150 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCS------------------S
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCcc------------------c
Confidence 1235667777777777655788999999999999999999999999999999998864310 0
Q ss_pred cCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCC
Q 003363 729 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ 808 (826)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~ 808 (826)
+ .....+++|+|++||++|..+|++.++ +++.+++.|.++++++++ ++|.+.
T Consensus 151 ---------~--------------~~~~~~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~g~~~~~~~~~-~gH~~~--- 202 (223)
T 3b5e_A 151 ---------V--------------PATDLAGIRTLIIAGAADETYGPFVPA-LVTLLSRHGAEVDARIIP-SGHDIG--- 202 (223)
T ss_dssp ---------C--------------CCCCCTTCEEEEEEETTCTTTGGGHHH-HHHHHHHTTCEEEEEEES-CCSCCC---
T ss_pred ---------c--------------ccccccCCCEEEEeCCCCCcCCHHHHH-HHHHHHHCCCceEEEEec-CCCCcC---
Confidence 0 012345789999999999999999999 999999999999999999 999885
Q ss_pred CHHHHHHHHHHHHHHHc
Q 003363 809 SDFESFLNIGLWFKKYC 825 (826)
Q Consensus 809 ~~~~~~~~i~~w~~~~l 825 (826)
.+....+.+||++.+
T Consensus 203 --~~~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 203 --DPDAAIVRQWLAGPI 217 (223)
T ss_dssp --HHHHHHHHHHHHCC-
T ss_pred --HHHHHHHHHHHHhhh
Confidence 244678999998654
No 94
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.79 E-value=1.6e-18 Score=174.78 Aligned_cols=185 Identities=13% Similarity=0.133 Sum_probs=140.5
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEE--CCCCCCCCchhhhhcCCCCCC----cchHHHHHHHHHHHH
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIV--NYRGSLGFGEEALQSLPGKVG----SQDVNDVLTAIDHVI 663 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~--d~rG~~g~G~~~~~~~~~~~~----~~~~~D~~~~i~~l~ 663 (826)
++.|+||++||++.. ...|...+..|++ ||.|+++ |++|.+.... +.......+. ..++.++.+.++++.
T Consensus 36 ~~~~~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~~~d~~g~g~s~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 111 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGN--ELDLLPLAEIVDS-EASVLSVRGNVLENGMPRF-FRRLAEGIFDEEDLIFRTKELNEFLDEAA 111 (226)
T ss_dssp TTSCEEEEECCTTCC--TTTTHHHHHHHHT-TSCEEEECCSEEETTEEES-SCEEETTEECHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCC--hhHHHHHHHHhcc-CceEEEecCcccCCcchhh-ccccCccCcChhhHHHHHHHHHHHHHHHH
Confidence 578999999997755 4467777888887 9999999 7777432210 0000001111 122455666777777
Q ss_pred HcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhH
Q 003363 664 DMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDL 743 (826)
Q Consensus 664 ~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (826)
+...++.++++++|||+||.+++.++.++|++++++|+.+|......
T Consensus 112 ~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------------------------------- 158 (226)
T 2h1i_A 112 KEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG--------------------------------- 158 (226)
T ss_dssp HHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS---------------------------------
T ss_pred hhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc---------------------------------
Confidence 77667889999999999999999999999999999999998753210
Q ss_pred HHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 744 TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 744 ~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
......+++|+|+++|++|..+|++.++.+++.+++.+.++++ ++++++|.+. .+....+.+||.+
T Consensus 159 --------~~~~~~~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~ 224 (226)
T 2h1i_A 159 --------MQLANLAGKSVFIAAGTNDPICSSAESEELKVLLENANANVTM-HWENRGHQLT-----MGEVEKAKEWYDK 224 (226)
T ss_dssp --------CCCCCCTTCEEEEEEESSCSSSCHHHHHHHHHHHHTTTCEEEE-EEESSTTSCC-----HHHHHHHHHHHHH
T ss_pred --------cccccccCCcEEEEeCCCCCcCCHHHHHHHHHHHHhcCCeEEE-EeCCCCCCCC-----HHHHHHHHHHHHH
Confidence 0112235789999999999999999999999999988888998 9999999884 4677899999998
Q ss_pred Hc
Q 003363 824 YC 825 (826)
Q Consensus 824 ~l 825 (826)
+|
T Consensus 225 ~l 226 (226)
T 2h1i_A 225 AF 226 (226)
T ss_dssp HC
T ss_pred hC
Confidence 75
No 95
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.79 E-value=5e-18 Score=172.77 Aligned_cols=194 Identities=17% Similarity=0.147 Sum_probs=138.5
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHHC-----CcEEEEECCCCCC------CCchhhhhc----CCCCCCcchHH
Q 003363 589 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV-----GYSLLIVNYRGSL------GFGEEALQS----LPGKVGSQDVN 653 (826)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~-----G~~Vl~~d~rG~~------g~G~~~~~~----~~~~~~~~~~~ 653 (826)
.++.|+||++||.+.. ...|...+..|+.+ ||.|+.+|.++.. +.+..|... .........++
T Consensus 20 ~~~~p~vv~lHG~g~~--~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 97 (239)
T 3u0v_A 20 GRHSASLIFLHGSGDS--GQGLRMWIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESID 97 (239)
T ss_dssp SCCCEEEEEECCTTCC--HHHHHHHHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHH
T ss_pred CCCCcEEEEEecCCCc--hhhHHHHHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHH
Confidence 4678999999996654 44566777777765 6999999986421 111111100 00011112344
Q ss_pred HHHHHHHHHHHc---CCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcC
Q 003363 654 DVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 730 (826)
Q Consensus 654 D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (826)
++.+.+..+++. ..+|.++++|+|||+||++++.++.++|++++++|+.+|..+....
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------------------- 158 (239)
T 3u0v_A 98 VMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------------------- 158 (239)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH-------------------
T ss_pred HHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH-------------------
Confidence 444444444432 3478899999999999999999999999999999999987542110
Q ss_pred CccCCCCCChhhHHHHhhcCcccccCCCCCc-EEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCC
Q 003363 731 KDSFTESPSVEDLTRFHSKSPISHISKVKTP-TIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQS 809 (826)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P-vLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~ 809 (826)
...... .....+| +|++||++|..+|++++.++++.|++.+.+++++++++++|.+.
T Consensus 159 -----------~~~~~~-------~~~~~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~~~~~~~~~~~g~~H~~~---- 216 (239)
T 3u0v_A 159 -----------VYQALQ-------KSNGVLPELFQCHGTADELVLHSWAEETNSMLKSLGVTTKFHSFPNVYHELS---- 216 (239)
T ss_dssp -----------HHHHHH-------HCCSCCCCEEEEEETTCSSSCHHHHHHHHHHHHHTTCCEEEEEETTCCSSCC----
T ss_pred -----------HHHHHH-------hhccCCCCEEEEeeCCCCccCHHHHHHHHHHHHHcCCcEEEEEeCCCCCcCC----
Confidence 000000 1223456 99999999999999999999999999999999999999999986
Q ss_pred HHHHHHHHHHHHHHHcC
Q 003363 810 DFESFLNIGLWFKKYCK 826 (826)
Q Consensus 810 ~~~~~~~i~~w~~~~l~ 826 (826)
.+....+.+||+++|+
T Consensus 217 -~~~~~~~~~~l~~~l~ 232 (239)
T 3u0v_A 217 -KTELDILKLWILTKLP 232 (239)
T ss_dssp -HHHHHHHHHHHHHHCC
T ss_pred -HHHHHHHHHHHHHhCC
Confidence 4678899999999874
No 96
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.79 E-value=1.3e-18 Score=192.04 Aligned_cols=230 Identities=13% Similarity=0.090 Sum_probs=152.2
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..+.++++.|.+ .++.|+||++||.+... ...+......|+++||.|+++|+||. |.+...... ...
T Consensus 176 ~g~~l~~~~~~P~~---~~~~P~vv~~hG~~~~~-~~~~~~~~~~l~~~G~~V~~~D~~G~---G~s~~~~~~----~~~ 244 (415)
T 3mve_A 176 EKGKITAHLHLTNT---DKPHPVVIVSAGLDSLQ-TDMWRLFRDHLAKHDIAMLTVDMPSV---GYSSKYPLT----EDY 244 (415)
T ss_dssp SSSEEEEEEEESCS---SSCEEEEEEECCTTSCG-GGGHHHHHHTTGGGTCEEEEECCTTS---GGGTTSCCC----SCT
T ss_pred CCEEEEEEEEecCC---CCCCCEEEEECCCCccH-HHHHHHHHHHHHhCCCEEEEECCCCC---CCCCCCCCC----CCH
Confidence 57789999999973 56789999999966432 22344456778899999999999994 443211111 111
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhh-cc-CCCCCCchhhhhccCc
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-VG-TTDIPDWCYVESYGSK 729 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~-~~-~~~~~~~~~~~~~~~~ 729 (826)
......+++++.+...+|.++|+|+|||+||++++.++..+|++++++|+.+|+.+.... .. ....+. .+...+..
T Consensus 245 ~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 322 (415)
T 3mve_A 245 SRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQMPK-MYLDVLAS- 322 (415)
T ss_dssp THHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHTTSCH-HHHHHHHH-
T ss_pred HHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHHHhHH-HHHHHHHH-
Confidence 233456777887777788899999999999999999999999999999999998642111 00 000000 00000000
Q ss_pred CCccCCCCC-Chh-hHHHHhhcCcccc----cCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCC-CCC
Q 003363 730 GKDSFTESP-SVE-DLTRFHSKSPISH----ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN-DVH 802 (826)
Q Consensus 730 ~~~~~~~~~-~~~-~~~~~~~~sp~~~----~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~-~~H 802 (826)
.+...+ ... ....+...++... +.++++|+|+++|++|..+|++++..+.+ .+.+++++++++ ..|
T Consensus 323 ---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~PvLii~G~~D~~vp~~~~~~l~~----~~~~~~l~~i~g~~~h 395 (415)
T 3mve_A 323 ---RLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKTKVPILAMSLEGDPVSPYSDNQMVAF----FSTYGKAKKISSKTIT 395 (415)
T ss_dssp ---HTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCBSSCEEEEEETTCSSSCHHHHHHHHH----TBTTCEEEEECCCSHH
T ss_pred ---HhCCCccCHHHHHHHHhhcCcccccccccCCCCCCEEEEEeCCCCCCCHHHHHHHHH----hCCCceEEEecCCCcc
Confidence 000000 111 1122223333222 46789999999999999999999887666 455689999998 333
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 803 GIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 803 ~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
. ...+....+.+||+++|+
T Consensus 396 ~-----~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 396 Q-----GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp H-----HHHHHHHHHHHHHHHHHT
T ss_pred c-----chHHHHHHHHHHHHHHhc
Confidence 2 345778899999999874
No 97
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.79 E-value=6.7e-19 Score=192.16 Aligned_cols=250 Identities=15% Similarity=0.166 Sum_probs=154.3
Q ss_pred eccCCCeeEEEEEEecCCCC--CCCCCcEEEEEcCCCCCCCCccch------HHHHHHHHCCcEEEEECCCCCCCCchhh
Q 003363 568 LTKGAQKPFEAIFVSSSHKK--DCSCDPLIVVLHGGPHSVSLSSYS------KSLAFLSSVGYSLLIVNYRGSLGFGEEA 639 (826)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~--~~~~~P~vv~~HGg~~~~~~~~~~------~~~~~la~~G~~Vl~~d~rG~~g~G~~~ 639 (826)
+...+|..++++.+.|.... ..++.|+||++||.+... ..|. ..+..|+++||.|+++|+||.+.+....
T Consensus 32 ~~~~dG~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~--~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~G~S~~~~ 109 (377)
T 1k8q_A 32 VVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASA--TNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNL 109 (377)
T ss_dssp EECTTSEEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCG--GGGSSSCTTTCHHHHHHHTTCEEEECCCTTSTTSCEES
T ss_pred eEcCCCCEEEEEEecCCCCCccccCCCCeEEEECCCCCch--hhhhcCCCcccHHHHHHHCCCCEEEecCCCCCCCCCCC
Confidence 44557888988888665211 114679999999976553 2232 3455889999999999999955433210
Q ss_pred h--hcCCC--CCCcc-hHH-HHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCC---ceeEEEecCCccchhh
Q 003363 640 L--QSLPG--KVGSQ-DVN-DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD---KFVAAAARNPLCNLAL 710 (826)
Q Consensus 640 ~--~~~~~--~~~~~-~~~-D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~---~~~a~v~~~p~~~~~~ 710 (826)
. ..... .+... ..+ |+.++++++++. .+.+++.|+|||+||.+++.++.++|+ +++++|+.+|......
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~~ 187 (377)
T 1k8q_A 110 YYSPDSVEFWAFSFDEMAKYDLPATIDFILKK--TGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKY 187 (377)
T ss_dssp SSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSS
T ss_pred CCCCCcccccCccHHHHHhhhHHHHHHHHHHh--cCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhccc
Confidence 0 00000 11111 234 888899988776 345789999999999999999999998 8999999998654321
Q ss_pred hccCC---------------C----CCCchhhhhc----------------------cC-------cCCcc-CCCCCC--
Q 003363 711 MVGTT---------------D----IPDWCYVESY----------------------GS-------KGKDS-FTESPS-- 739 (826)
Q Consensus 711 ~~~~~---------------~----~~~~~~~~~~----------------------~~-------~~~~~-~~~~~~-- 739 (826)
..... . .+........ +. ..... +...+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (377)
T 1k8q_A 188 TETLINKLMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMSRLDVYLSHNPAGT 267 (377)
T ss_dssp CCSGGGGGGTSCHHHHHHHSCSSEESCCCHHHHHHHHHTTTBTTTHHHHHHHHHHHHCCCGGGSCGGGHHHHHTTCCCCE
T ss_pred chhHHHHHHhhccHHHHhhcCccccCcHHHHHHHHHHHhhCCccHHHHHHHHHHHhcCCCcccCCHHHHHHHhccCCCCc
Confidence 10000 0 0000000000 00 00000 000000
Q ss_pred -hh------------------------hHHHHhhcC-cccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEE
Q 003363 740 -VE------------------------DLTRFHSKS-PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 793 (826)
Q Consensus 740 -~~------------------------~~~~~~~~s-p~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 793 (826)
.. ....+.... +...+.++++|+|+++|++|..+|++.+.++++.+.+. .+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~---~~ 344 (377)
T 1k8q_A 268 SVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHVPIAVWNGGNDLLADPHDVDLLLSKLPNL---IY 344 (377)
T ss_dssp EHHHHHHHHHHHHHCSCBCCCCSSHHHHHHHHSSSSCCBCCGGGCCSCEEEEEETTCSSSCHHHHHHHHTTCTTE---EE
T ss_pred cHHHHHHHHHHHhcCCeeeccCCcchhhHHHcCCCCCcccCHhhCCCCEEEEEeCCCcccCHHHHHHHHHhCcCc---cc
Confidence 00 111111111 23347889999999999999999999998888777642 24
Q ss_pred EEEeCCCCCCCCC--CCCHHHHHHHHHHHHHHH
Q 003363 794 VIVFPNDVHGIER--PQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 794 ~~~~p~~~H~~~~--~~~~~~~~~~i~~w~~~~ 824 (826)
+++++++||.... .+...+++..|.+||++|
T Consensus 345 ~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 377 (377)
T 1k8q_A 345 HRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTD 377 (377)
T ss_dssp EEEETTCCTTHHHHCTTHHHHTHHHHHHHHHTC
T ss_pred EEecCCCCceEEEecCCcHHHHHHHHHHHhccC
Confidence 8999999998653 455567889999999864
No 98
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.79 E-value=3.3e-19 Score=189.48 Aligned_cols=223 Identities=18% Similarity=0.204 Sum_probs=151.3
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC-CccchHHHHHHH-HCCcEEEEECCCCCCCCchhhhhcCCCCCCcchH
Q 003363 575 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS-LSSYSKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV 652 (826)
Q Consensus 575 ~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~-~~~~~~~~~~la-~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~ 652 (826)
.+.+.+| +. .++.|+||++|||++... ...+...+..|+ +.||.|+++||||.+++. .....
T Consensus 67 ~i~~~~y-~~----~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~-----------~p~~~ 130 (311)
T 1jji_A 67 DIRVRVY-QQ----KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHK-----------FPAAV 130 (311)
T ss_dssp EEEEEEE-ES----SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSC-----------TTHHH
T ss_pred cEEEEEE-cC----CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCC-----------CCCcH
Confidence 7888888 42 457899999999885332 346777788887 689999999999965431 12357
Q ss_pred HHHHHHHHHHHHc---CCCCCCcEEEEEecchHHHHHHHHHhCCCc----eeEEEecCCccchhhhcc----CCCCCC-c
Q 003363 653 NDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVG----TTDIPD-W 720 (826)
Q Consensus 653 ~D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~p~~~~~~~~~----~~~~~~-~ 720 (826)
+|+.++++|+.+. ..+|+++|+|+|||+||.+++.++.++++. ++++|+.+|+.+...... ...... +
T Consensus 131 ~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~ 210 (311)
T 1jji_A 131 YDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAPTPSLLEFGEGLWIL 210 (311)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSCCHHHHHTSSSCSSC
T ss_pred HHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCCCccHHHhcCCCccC
Confidence 8899999998875 236778999999999999999999887765 999999999876532100 000000 0
Q ss_pred h--hhhhccCcCCccCCCCCChhhHHHHhhcCccc-ccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEe
Q 003363 721 C--YVESYGSKGKDSFTESPSVEDLTRFHSKSPIS-HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 797 (826)
Q Consensus 721 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~-~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 797 (826)
. ....+. ..+.... .. ......+|+. .+..+ +|+||++|+.|..+ .++..++++|++.|++++++++
T Consensus 211 ~~~~~~~~~----~~~~~~~--~~-~~~~~~~p~~~~l~~~-~P~li~~G~~D~l~--~~~~~~~~~l~~~g~~~~~~~~ 280 (311)
T 1jji_A 211 DQKIMSWFS----EQYFSRE--ED-KFNPLASVIFADLENL-PPALIITAEYDPLR--DEGEVFGQMLRRAGVEASIVRY 280 (311)
T ss_dssp CHHHHHHHH----HHHCSSG--GG-GGCTTTSGGGSCCTTC-CCEEEEEEEECTTH--HHHHHHHHHHHHTTCCEEEEEE
T ss_pred CHHHHHHHH----HHhCCCC--cc-CCCcccCcccccccCC-ChheEEEcCcCcch--HHHHHHHHHHHHcCCCEEEEEE
Confidence 0 000000 0000000 00 0001123332 22222 69999999999987 5788899999999999999999
Q ss_pred CCCCCCCCCC----CCHHHHHHHHHHHHHH
Q 003363 798 PNDVHGIERP----QSDFESFLNIGLWFKK 823 (826)
Q Consensus 798 p~~~H~~~~~----~~~~~~~~~i~~w~~~ 823 (826)
+|++|.+... ....+++..+.+||++
T Consensus 281 ~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 281 RGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp EEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 9999987532 2345678889999875
No 99
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.79 E-value=2.2e-18 Score=182.59 Aligned_cols=216 Identities=17% Similarity=0.183 Sum_probs=147.5
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccc-hHHHHHHHHCCcEEEEECCCCCCC---------C--ch
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSSVGYSLLIVNYRGSLG---------F--GE 637 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~-~~~~~~la~~G~~Vl~~d~rG~~g---------~--G~ 637 (826)
..++..+.+++|.|.+. ..+.|+||++||++... ..| ......++++||.|+++|+|+... + |.
T Consensus 34 ~~~~~~l~~~~~~P~~~--~~~~p~vv~lHG~~~~~--~~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~~~~~g~~~g~ 109 (304)
T 3d0k_A 34 RNADRPFTLNTYRPYGY--TPDRPVVVVQHGVLRNG--ADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTA 109 (304)
T ss_dssp -CTTCCEEEEEEECTTC--CTTSCEEEEECCTTCCH--HHHHHHTHHHHHHHTCEEEEEECCTTTSCHHHHTTTTTCBCT
T ss_pred CCCCceEEEEEEeCCCC--CCCCcEEEEeCCCCCCH--HHHHHHHHHHHHHCCcEEEEeCCccccCCCccccccCccccc
Confidence 56778899999999753 35679999999987653 344 445778888999999999996411 1 11
Q ss_pred hhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCC-ceeEEEecC-CccchhhhccCC
Q 003363 638 EALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-KFVAAAARN-PLCNLALMVGTT 715 (826)
Q Consensus 638 ~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~-p~~~~~~~~~~~ 715 (826)
+. .+.......++|+.++++++.++..+|.++|+|+|||+||++++.++.++|+ +++++|+.+ |..++...
T Consensus 110 s~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~~~~~---- 182 (304)
T 3d0k_A 110 AG---NPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYTLPTF---- 182 (304)
T ss_dssp TS---CBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCCCSST----
T ss_pred cC---CCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCcccccCCc----
Confidence 10 0111223346789999999998867899999999999999999999999995 788888655 55442211
Q ss_pred CCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCC-----------------cHHH
Q 003363 716 DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVP-----------------VSNG 778 (826)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp-----------------~~~~ 778 (826)
...|. ++. ...+ .+|......+++|+|++||+.|..+. .+.+
T Consensus 183 -~~~~~----~~~------~~~~----------~~~~~~~~~~~~p~li~~G~~D~~~~~p~~~~~~~~~~~~~~~~~~~ 241 (304)
T 3d0k_A 183 -EHRFP----EGL------DGVG----------LTEDHLARLLAYPMTILAGDQDIATDDPNLPSEPAALRQGPHRYARA 241 (304)
T ss_dssp -TSBTT----TSS------BTTT----------CCHHHHHHHHHSCCEEEEETTCCCC--CCSCCSHHHHTTCSSHHHHH
T ss_pred -cccCc----ccc------CCCC----------CCHHHHHhhhcCCEEEEEeCCCCCccccccccChhhhccCccHHHHH
Confidence 00010 000 0000 12222223346899999999999742 3456
Q ss_pred HHHHHHHH----hCCCC--EEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 779 LQYARALR----EKGVE--TKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 779 ~~~~~~l~----~~g~~--~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
..+++.++ ..|.+ ++++++||++|.+. .....+.+||.+
T Consensus 242 ~~~~~~l~~~a~~~g~~~~~~~~~~pg~gH~~~------~~~~~~~~~~~~ 286 (304)
T 3d0k_A 242 RHYYEAGQRAAAQRGLPFGWQLQVVPGIGHDGQ------AMSQVCASLWFD 286 (304)
T ss_dssp HHHHHHHHHHHHHHTCCCCCEEEEETTCCSCHH------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEeCCCCCchH------HHHHHHHHHHhh
Confidence 67777776 66776 99999999999873 556777887754
No 100
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.79 E-value=9.8e-19 Score=179.59 Aligned_cols=185 Identities=17% Similarity=0.118 Sum_probs=136.9
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEE--CCCCCCCCchhhhhc-CCCC--CCcchHHHHHHHHHHHHH
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIV--NYRGSLGFGEEALQS-LPGK--VGSQDVNDVLTAIDHVID 664 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~--d~rG~~g~G~~~~~~-~~~~--~~~~~~~D~~~~i~~l~~ 664 (826)
++.|+||++||++.. ...|...+..|++ +|.|+++ |++|.++++...... .... .....++|+.++++++.+
T Consensus 60 ~~~p~vv~~HG~~~~--~~~~~~~~~~l~~-~~~v~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 136 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGD--ENQFFDFGARLLP-QATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERATGKMADFIKANRE 136 (251)
T ss_dssp TTSCEEEEECCTTCC--HHHHHHHHHHHST-TSEEEEECCSEEETTEEESSCBCGGGCBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCC--HhHHHHHHHhcCC-CceEEEecCCcCCCCCcccccCCCCCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 578999999997754 4466667777766 5999999 677754332110000 0000 011236777778888777
Q ss_pred cCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHH
Q 003363 665 MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT 744 (826)
Q Consensus 665 ~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (826)
+. +.++++|+|||+||++++.++.++|++++++|+.+|......
T Consensus 137 ~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~---------------------------------- 180 (251)
T 2r8b_A 137 HY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP---------------------------------- 180 (251)
T ss_dssp HH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC----------------------------------
T ss_pred cc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc----------------------------------
Confidence 63 678999999999999999999999999999999998753210
Q ss_pred HHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 745 RFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 745 ~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
......+++|+|+++|++|..+|+++++++++.+++.+.++++ ++++++|.+. .+..+.+.+||+++
T Consensus 181 -------~~~~~~~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~gH~~~-----~~~~~~~~~~l~~~ 247 (251)
T 2r8b_A 181 -------KISPAKPTRRVLITAGERDPICPVQLTKALEESLKAQGGTVET-VWHPGGHEIR-----SGEIDAVRGFLAAY 247 (251)
T ss_dssp -------CCCCCCTTCEEEEEEETTCTTSCHHHHHHHHHHHHHHSSEEEE-EEESSCSSCC-----HHHHHHHHHHHGGG
T ss_pred -------cccccccCCcEEEeccCCCccCCHHHHHHHHHHHHHcCCeEEE-EecCCCCccC-----HHHHHHHHHHHHHh
Confidence 0112345799999999999999999999999999987777777 6667899884 35678899999998
Q ss_pred cC
Q 003363 825 CK 826 (826)
Q Consensus 825 l~ 826 (826)
|+
T Consensus 248 l~ 249 (251)
T 2r8b_A 248 GG 249 (251)
T ss_dssp C-
T ss_pred cC
Confidence 74
No 101
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.79 E-value=3e-18 Score=165.34 Aligned_cols=174 Identities=11% Similarity=0.130 Sum_probs=130.3
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (826)
++.|+||++||.+.......+......|+++||.|+++|+||.+ .+.... ......+++.++++++.+.. +
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g---~s~~~~----~~~~~~~~~~~~~~~~~~~~--~ 72 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVTALAEVAERLGWTHERPDFTDLD---ARRDLG----QLGDVRGRLQRLLEIARAAT--E 72 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEECCCCHHHH---TCGGGC----TTCCHHHHHHHHHHHHHHHH--T
T ss_pred CCCcEEEEEeCCCCCccHHHHHHHHHHHHHCCCEEEEeCCCCCC---CCCCCC----CCCCHHHHHHHHHHHHHhcC--C
Confidence 46789999999775533224447788899999999999999943 332111 11112445556666766653 4
Q ss_pred CCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhc
Q 003363 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSK 749 (826)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (826)
.++++++|||+||.+++.++.++| ++++|+.+|......+ +
T Consensus 73 ~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~--------------------------~----------- 113 (176)
T 2qjw_A 73 KGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPL--------------------------P----------- 113 (176)
T ss_dssp TSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTB--------------------------C-----------
T ss_pred CCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCcccc--------------------------C-----------
Confidence 579999999999999999999988 9999999886542110 0
Q ss_pred CcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 750 SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 750 sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
.+.++++|+|+++|++|..+|++.+.++++.+ +++++++ +++|.+. +...++.+.+.+||++
T Consensus 114 ----~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-----~~~~~~~-~~~H~~~--~~~~~~~~~i~~fl~~ 175 (176)
T 2qjw_A 114 ----ALDAAAVPISIVHAWHDELIPAADVIAWAQAR-----SARLLLV-DDGHRLG--AHVQAASRAFAELLQS 175 (176)
T ss_dssp ----CCCCCSSCEEEEEETTCSSSCHHHHHHHHHHH-----TCEEEEE-SSCTTCT--TCHHHHHHHHHHHHHT
T ss_pred ----cccccCCCEEEEEcCCCCccCHHHHHHHHHhC-----CceEEEe-CCCcccc--ccHHHHHHHHHHHHHh
Confidence 04567899999999999999999999999887 3688888 8999883 5566788888888865
No 102
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.78 E-value=1.9e-18 Score=189.97 Aligned_cols=261 Identities=16% Similarity=0.129 Sum_probs=170.1
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 003363 156 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (826)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~ 234 (826)
...++|||||++|||+...+ +..+++.+. .+++.++++...... ...+.|||||++|+|.+.+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~-g~~~l~~~d~~~~~~~~l~~~~~~~---------~~~~~~spdg~~l~~~~~~------ 101 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFD-GNRNYYLLNLETQQAVQLTEGKGDN---------TFGGFISTDERAFFYVKNE------ 101 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTT-SSCEEEEEETTTTEEEECCCSSCBC---------TTTCEECTTSSEEEEEETT------
T ss_pred eecCcCCCCCCEEEEEEecC-CCceEEEEECCCCcEEEeecCCCCc---------cccceECCCCCEEEEEEcC------
Confidence 56789999999999998764 555787777 555555544322111 1348899999999998542
Q ss_pred CccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEE
Q 003363 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 314 (826)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lv 314 (826)
.+|+++|+++++.+.+...+.. |+|||+. |+
T Consensus 102 --------------------------------------~~l~~~d~~~~~~~~~~~~~~~-------~~~~g~~----l~ 132 (396)
T 3c5m_A 102 --------------------------------------LNLMKVDLETLEEQVIYTVDEE-------WKGYGTW----VA 132 (396)
T ss_dssp --------------------------------------TEEEEEETTTCCEEEEEECCTT-------EEEEEEE----EE
T ss_pred --------------------------------------CcEEEEECCCCCcEEEEecccc-------cCCCCCE----EE
Confidence 3699999999988877311111 7777776 66
Q ss_pred EEeec-------------Ccceeeeeee--eccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCcee
Q 003363 315 FVGWS-------------SETRKLGIKY--CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRF 379 (826)
Q Consensus 315 f~~~~-------------~~~~~~g~~~--~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~ 379 (826)
|.... .+.+...... .......||++|+ .+++.+.++........+.|
T Consensus 133 ~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~-----------------~~g~~~~~~~~~~~~~~~~~ 195 (396)
T 3c5m_A 133 NSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDI-----------------ETGELEVIHQDTAWLGHPIY 195 (396)
T ss_dssp CTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEET-----------------TTCCEEEEEEESSCEEEEEE
T ss_pred eccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEEC-----------------CCCcEEeeccCCcccccceE
Confidence 64311 0000000000 0024458999998 77788888766666788999
Q ss_pred cC-CCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEE
Q 003363 380 SP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 458 (826)
Q Consensus 380 Sp-DG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l 458 (826)
|| ||++|+|.+... ......+||++|+.++..+.++..... ..+..+.|+|||+.|
T Consensus 196 sp~dg~~l~~~~~~~-----~~~~~~~l~~~d~~~~~~~~l~~~~~~------------------~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGP-----HDLVDARMWLVNEDGSNVRKIKEHAEG------------------ESCTHEFWIPDGSAM 252 (396)
T ss_dssp ETTEEEEEEEEECSC-----SSSCSCCCEEEETTSCCCEESSCCCTT------------------EEEEEEEECTTSSCE
T ss_pred CCCCCCEEEEEecCC-----CCCCCceEEEEECCCCceeEeeccCCC------------------ccccceEECCCCCEE
Confidence 99 899999998532 111225799999877654433321000 012356899999999
Q ss_pred EEEEEeCCeE--EEEEEECCCCcEEEecCCCCCeeeEEEee-cCCEEEEEEeC------------CCCCCeEEEEeeccc
Q 003363 459 LLSSIWGSSQ--VIISVNVSSGELLRITPAESNFSWSLLTL-DGDNIIAVSSS------------PVDVPQVKYGYFVDK 523 (826)
Q Consensus 459 ~~~~~~~~~~--~l~~vdl~tg~~~~lt~~~~~~~~~~~s~-dg~~l~~~~s~------------~~~p~~l~~~~~~~~ 523 (826)
++.+...+.. .|+.+|+.+|+.++++.... .. ..|++ ||+.+++.... ......|++.++.++
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred EEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 8887766554 49999999999888875443 33 78899 99866654432 012267888887544
No 103
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.78 E-value=6e-18 Score=182.73 Aligned_cols=251 Identities=16% Similarity=0.080 Sum_probs=154.6
Q ss_pred eeeccCCC--eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-cc-----chHHHHHHH-HCCcEEEEECCCCCCCCc
Q 003363 566 ANLTKGAQ--KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SS-----YSKSLAFLS-SVGYSLLIVNYRGSLGFG 636 (826)
Q Consensus 566 ~~~~~~~g--~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~-----~~~~~~~la-~~G~~Vl~~d~rG~~g~G 636 (826)
+..++.+| ..+.++++.|.+. .++.|+|++.||....... .. ....+..|+ ++||+|+++||||.++++
T Consensus 48 Y~s~d~~G~~~~~~g~l~~P~~~--~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~D~rG~G~s~ 125 (377)
T 4ezi_A 48 YKTQSPDGNLTIASGLVAMPIHP--VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMPDYLGLGDNE 125 (377)
T ss_dssp EEEECTTSCEEEEEEEEEEESSC--SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEECCTTSTTCC
T ss_pred EEEECCCCCEEEEEEEEEECCCC--CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEeCCCCCCCCC
Confidence 34455445 5688999999852 4789999999997642211 11 113456678 999999999999976654
Q ss_pred hhhhhcCCCCCCc---chHHHHHHHHHHHHHc-CCCCCCcEEEEEecchHHHHHHHHHhCC----C-ceeEEEecCCccc
Q 003363 637 EEALQSLPGKVGS---QDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQAP----D-KFVAAAARNPLCN 707 (826)
Q Consensus 637 ~~~~~~~~~~~~~---~~~~D~~~~i~~l~~~-~~~d~~rv~l~G~S~GG~~a~~~a~~~p----~-~~~a~v~~~p~~~ 707 (826)
.... ....+. ..+.|...++..+.+. +..+.++|+++|||+||+++++++..+| + .+++++..++..+
T Consensus 126 ~~~~---~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~~~~p~d 202 (377)
T 4ezi_A 126 LTLH---PYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAPGSAPYG 202 (377)
T ss_dssp CSSC---CTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEEESCCCC
T ss_pred CCCc---ccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEecCcccC
Confidence 3110 101111 1233444444444443 3235689999999999999999987654 3 5889999999887
Q ss_pred hhhhccCCC---C-C--Cch-h--------------hhh-ccCcC-------Cc----------cCCCCC----ChhhHH
Q 003363 708 LALMVGTTD---I-P--DWC-Y--------------VES-YGSKG-------KD----------SFTESP----SVEDLT 744 (826)
Q Consensus 708 ~~~~~~~~~---~-~--~~~-~--------------~~~-~~~~~-------~~----------~~~~~~----~~~~~~ 744 (826)
+.......+ . . .+. + ... +...+ .. .+.... .....+
T Consensus 203 l~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (377)
T 4ezi_A 203 WEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIFQPKFSN 282 (377)
T ss_dssp HHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGBCHHHHH
T ss_pred HHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHhchhhhh
Confidence 653321110 0 0 000 0 000 00000 00 000000 000000
Q ss_pred HHh-hcCc-c------c--ccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCC--CCCCCCCCCCHHH
Q 003363 745 RFH-SKSP-I------S--HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN--DVHGIERPQSDFE 812 (826)
Q Consensus 745 ~~~-~~sp-~------~--~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~--~~H~~~~~~~~~~ 812 (826)
.+. ..+| + . .-.++++|+|++||+.|.+||+.+++++++++++.|. ++++.+++ .+|... ...
T Consensus 283 ~~~~~~~p~~~~~l~~~~~~~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~G~-v~~~~~~~~~~~H~~~----~~~ 357 (377)
T 4ezi_A 283 GIISKTDRNTEILKINFNHYDFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKYSD-FVWIKSVSDALDHVQA----HPF 357 (377)
T ss_dssp HHHTTCSTTHHHHHHHHCCCCSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTTCS-CEEEEESCSSCCTTTT----HHH
T ss_pred hcccccchHHHHHHHHhcccCCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhcCC-EEEEEcCCCCCCccCh----HHH
Confidence 011 0122 1 0 1125679999999999999999999999999999999 99999999 899764 346
Q ss_pred HHHHHHHHHHHHcC
Q 003363 813 SFLNIGLWFKKYCK 826 (826)
Q Consensus 813 ~~~~i~~w~~~~l~ 826 (826)
....+++||+++++
T Consensus 358 ~~~~~~~wl~~~~~ 371 (377)
T 4ezi_A 358 VLKEQVDFFKQFER 371 (377)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhc
Confidence 77899999999864
No 104
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.78 E-value=2.3e-18 Score=189.84 Aligned_cols=249 Identities=19% Similarity=0.212 Sum_probs=154.9
Q ss_pred eeccCCCeeEEEEEEecCC---CCCCCCCcEEEEEcCCCCCCCCccchHHHHHHH----HCCc---EEEEECCCCCCCCc
Q 003363 567 NLTKGAQKPFEAIFVSSSH---KKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLS----SVGY---SLLIVNYRGSLGFG 636 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~---~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la----~~G~---~Vl~~d~rG~~g~G 636 (826)
.+...+|..+++..+.|.+ ..+.++.|+||++||.+.. ...|...+..|+ ..|| .|+++|+|| +|
T Consensus 24 ~~~~~dg~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~~~G~~~~~vi~~D~~G---~G 98 (398)
T 2y6u_A 24 TLCATDRLELTYDVYTSAERQRRSRTATRLNLVFLHGSGMS--KVVWEYYLPRLVAADAEGNYAIDKVLLIDQVN---HG 98 (398)
T ss_dssp BSSTTCCCEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCC--GGGGGGGGGGSCCCBTTTTEEEEEEEEECCTT---SH
T ss_pred cccCCCceEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCc--HHHHHHHHHHHHHhhhhcCcceeEEEEEcCCC---CC
Confidence 4556788999999998864 1223456899999997755 456777777787 4589 999999999 66
Q ss_pred hhhhhcCCCCCCcch----HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc
Q 003363 637 EEALQSLPGKVGSQD----VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV 712 (826)
Q Consensus 637 ~~~~~~~~~~~~~~~----~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~ 712 (826)
.+............. ++|+.++++.+.....+++.++.|+||||||.+++.++.++|++++++|+.+|........
T Consensus 99 ~S~~~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 178 (398)
T 2y6u_A 99 DSAVRNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKAI 178 (398)
T ss_dssp HHHHHTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCCC
T ss_pred CCCCCCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEecccccccccc
Confidence 654321110011222 3444444443321111344569999999999999999999999999999999876531100
Q ss_pred c--CCCCCC----c--hhhhhccCcC-------------C--ccCCCCCChhhHHHHhh---------------------
Q 003363 713 G--TTDIPD----W--CYVESYGSKG-------------K--DSFTESPSVEDLTRFHS--------------------- 748 (826)
Q Consensus 713 ~--~~~~~~----~--~~~~~~~~~~-------------~--~~~~~~~~~~~~~~~~~--------------------- 748 (826)
. ....+. + .+...+.... . ..+......+..+.+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (398)
T 2y6u_A 179 GAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKME 258 (398)
T ss_dssp SCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESSC
T ss_pred ccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecCC
Confidence 0 000000 0 0000000000 0 00000011111111110
Q ss_pred ---------------cCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHH
Q 003363 749 ---------------KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFES 813 (826)
Q Consensus 749 ---------------~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~ 813 (826)
......+.++++|+|+++|++|..+|++.+..+++.+. .+++++++++||.+... ...++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~~~~~~~~~l~~~~~----~~~~~~~~~~gH~~~~e-~p~~~ 333 (398)
T 2y6u_A 259 QAQNLLCYMNMQTFAPFLISNVKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQ----NYHLDVIPGGSHLVNVE-APDLV 333 (398)
T ss_dssp HHHHHHTTSCGGGTHHHHHHHGGGCCSEEEEEEETTCCSSCHHHHHHHHHHCS----SEEEEEETTCCTTHHHH-SHHHH
T ss_pred chhhhhhhcccccchHHHHHhccccCCCEEEEEcCCCCCCCHHHHHHHHHhCC----CceEEEeCCCCccchhc-CHHHH
Confidence 01124567889999999999999999999888887775 47999999999976543 34578
Q ss_pred HHHHHHHHHHHc
Q 003363 814 FLNIGLWFKKYC 825 (826)
Q Consensus 814 ~~~i~~w~~~~l 825 (826)
.+.+.+||.+++
T Consensus 334 ~~~i~~fl~~~~ 345 (398)
T 2y6u_A 334 IERINHHIHEFV 345 (398)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 889999998865
No 105
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.78 E-value=3.2e-18 Score=176.66 Aligned_cols=184 Identities=15% Similarity=0.069 Sum_probs=137.8
Q ss_pred EEEEecCCCCC-CCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHH
Q 003363 578 AIFVSSSHKKD-CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVL 656 (826)
Q Consensus 578 ~~~~~P~~~~~-~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~ 656 (826)
+.+|.|.+... +++.|+||++||++.. ...|...+..|+++||.|+++|+|++. ...|+.
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~~s~-----------------~~~~~~ 94 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAG--PSTYAGLLSHWASHGFVVAAAETSNAG-----------------TGREML 94 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCC--GGGGHHHHHHHHHHTCEEEEECCSCCT-----------------TSHHHH
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCC--chhHHHHHHHHHhCCeEEEEecCCCCc-----------------cHHHHH
Confidence 67888874211 3378999999997764 467888899999999999999999631 124555
Q ss_pred HHHHHHHHc---------CCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhcc
Q 003363 657 TAIDHVIDM---------GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 727 (826)
Q Consensus 657 ~~i~~l~~~---------~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 727 (826)
.+++++.+. ..+|.++++|+|||+||.+++.++ .+++++++++.+|....
T Consensus 95 ~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~------------------- 153 (258)
T 2fx5_A 95 ACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLG------------------- 153 (258)
T ss_dssp HHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSS-------------------
T ss_pred HHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCcccc-------------------
Confidence 556665542 235778999999999999999887 45789999988764320
Q ss_pred CcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHH-HHHHHHHHHhCCCCEEEEEeCCCCCCCCC
Q 003363 728 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVETKVIVFPNDVHGIER 806 (826)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~-~~~~~~~l~~~g~~~~~~~~p~~~H~~~~ 806 (826)
.+. ....+.++++|+|+++|++|..+|+.. ..++++. .+.+++++++++++|.+..
T Consensus 154 ---------~~~-----------~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~H~~~~ 210 (258)
T 2fx5_A 154 ---------LGH-----------DSASQRRQQGPMFLMSGGGDTIAFPYLNAQPVYRR---ANVPVFWGERRYVSHFEPV 210 (258)
T ss_dssp ---------TTC-----------CGGGGGCCSSCEEEEEETTCSSSCHHHHTHHHHHH---CSSCEEEEEESSCCTTSST
T ss_pred ---------ccc-----------chhhhccCCCCEEEEEcCCCcccCchhhHHHHHhc---cCCCeEEEEECCCCCcccc
Confidence 000 012456688999999999999999986 7777766 3467999999999998875
Q ss_pred CCCHHHHHHHHHHHHHHHc
Q 003363 807 PQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 807 ~~~~~~~~~~i~~w~~~~l 825 (826)
.... ++...+.+||+++|
T Consensus 211 ~~~~-~~~~~i~~fl~~~l 228 (258)
T 2fx5_A 211 GSGG-AYRGPSTAWFRFQL 228 (258)
T ss_dssp TTCG-GGHHHHHHHHHHHH
T ss_pred chHH-HHHHHHHHHHHHHh
Confidence 5443 77889999999775
No 106
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.77 E-value=8e-19 Score=174.65 Aligned_cols=193 Identities=15% Similarity=0.225 Sum_probs=138.9
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH--HHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCC
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK--SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~--~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~ 648 (826)
.+|..+++..+.|. ..++.|+||++||++.. ...|.. ....|+++||.|+++|+|| +|.+..........
T Consensus 14 ~~g~~l~~~~~~p~---~~~~~~~vv~~hG~~~~--~~~~~~~~~~~~l~~~G~~v~~~d~~g---~g~s~~~~~~~~~~ 85 (210)
T 1imj_A 14 VQGQALFFREALPG---SGQARFSVLLLHGIRFS--SETWQNLGTLHRLAQAGYRAVAIDLPG---LGHSKEAAAPAPIG 85 (210)
T ss_dssp ETTEEECEEEEECS---SSCCSCEEEECCCTTCC--HHHHHHHTHHHHHHHTTCEEEEECCTT---SGGGTTSCCSSCTT
T ss_pred eCCeEEEEEEeCCC---CCCCCceEEEECCCCCc--cceeecchhHHHHHHCCCeEEEecCCC---CCCCCCCCCcchhh
Confidence 36788999999886 34578999999997754 345655 4788999999999999999 44443221111111
Q ss_pred cc-hHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhcc
Q 003363 649 SQ-DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 727 (826)
Q Consensus 649 ~~-~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 727 (826)
.. ..+++...++.+ +.++++++|||+||.+++.++.++|++++++|+.+|......
T Consensus 86 ~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~----------------- 142 (210)
T 1imj_A 86 ELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDKI----------------- 142 (210)
T ss_dssp SCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGGS-----------------
T ss_pred hcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCccccc-----------------
Confidence 11 115555555543 346899999999999999999999999999999988643100
Q ss_pred CcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCC
Q 003363 728 SKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP 807 (826)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~ 807 (826)
....+.++++|+|+++|++|. ++.+..+.+ +.+ .+.+++++++++|.+...
T Consensus 143 -----------------------~~~~~~~~~~p~l~i~g~~D~-~~~~~~~~~-~~~----~~~~~~~~~~~~H~~~~~ 193 (210)
T 1imj_A 143 -----------------------NAANYASVKTPALIVYGDQDP-MGQTSFEHL-KQL----PNHRVLIMKGAGHPCYLD 193 (210)
T ss_dssp -----------------------CHHHHHTCCSCEEEEEETTCH-HHHHHHHHH-TTS----SSEEEEEETTCCTTHHHH
T ss_pred -----------------------cchhhhhCCCCEEEEEcCccc-CCHHHHHHH-hhC----CCCCEEEecCCCcchhhc
Confidence 112234578999999999999 988777666 444 358999999999986433
Q ss_pred CCHHHHHHHHHHHHHHH
Q 003363 808 QSDFESFLNIGLWFKKY 824 (826)
Q Consensus 808 ~~~~~~~~~i~~w~~~~ 824 (826)
. ..++.+.+.+||++.
T Consensus 194 ~-~~~~~~~i~~fl~~~ 209 (210)
T 1imj_A 194 K-PEEWHTGLLDFLQGL 209 (210)
T ss_dssp C-HHHHHHHHHHHHHTC
T ss_pred C-HHHHHHHHHHHHHhc
Confidence 3 446788889998753
No 107
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.77 E-value=7.8e-18 Score=177.96 Aligned_cols=221 Identities=10% Similarity=0.105 Sum_probs=137.9
Q ss_pred ccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCC
Q 003363 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (826)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~ 648 (826)
...+|..++++.+.|.+. ..++.|+||++||.+.. ...|...+..|+++||.|+++|+||.. |.+... ...+.
T Consensus 13 ~~~dG~~l~~~~~~p~~~-~~~~~~~VvllHG~g~~--~~~~~~~~~~L~~~G~~Vi~~D~rGh~--G~S~~~--~~~~~ 85 (305)
T 1tht_A 13 RVNNGQELHVWETPPKEN-VPFKNNTILIASGFARR--MDHFAGLAEYLSTNGFHVFRYDSLHHV--GLSSGS--IDEFT 85 (305)
T ss_dssp EETTTEEEEEEEECCCTT-SCCCSCEEEEECTTCGG--GGGGHHHHHHHHTTTCCEEEECCCBCC------------CCC
T ss_pred EcCCCCEEEEEEecCccc-CCCCCCEEEEecCCccC--chHHHHHHHHHHHCCCEEEEeeCCCCC--CCCCCc--cccee
Confidence 344678899888877531 12356899999996644 457888999999999999999999951 333211 11121
Q ss_pred c-chHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchh--hhh
Q 003363 649 S-QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCY--VES 725 (826)
Q Consensus 649 ~-~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~--~~~ 725 (826)
. ...+|+.++++++.+. +.++++|+||||||.+++.++.+ | +++++|+.+|..++...........+.. ...
T Consensus 86 ~~~~~~D~~~~~~~l~~~---~~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (305)
T 1tht_A 86 MTTGKNSLCTVYHWLQTK---GTQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFDYLSLPIDE 160 (305)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSCGGGSCGGG
T ss_pred hHHHHHHHHHHHHHHHhC---CCCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhhhhhcchhh
Confidence 1 2257788888888743 34789999999999999999888 7 8899998887654321100000000000 000
Q ss_pred ccCcCCccCCCCC-Chh-hHHHHhhc------CcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEe
Q 003363 726 YGSKGKDSFTESP-SVE-DLTRFHSK------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 797 (826)
Q Consensus 726 ~~~~~~~~~~~~~-~~~-~~~~~~~~------sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 797 (826)
... .. .+.... ... ........ +....+.++++|+|+++|++|..+|++.+.++++.+.. ..++++++
T Consensus 161 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~i~~--~~~~l~~i 236 (305)
T 1tht_A 161 LPN-DL-DFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRT--GHCKLYSL 236 (305)
T ss_dssp CCS-EE-EETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTCCSCEEEEEETTCTTSCHHHHHHHHTTCTT--CCEEEEEE
T ss_pred Ccc-cc-cccccccCHHHHHHHHHhccccchhhHHHHHhhcCCCEEEEEeCCCCccCHHHHHHHHHhcCC--CCcEEEEe
Confidence 000 00 000000 000 00111111 12345778999999999999999999998887766532 34899999
Q ss_pred CCCCCCCC
Q 003363 798 PNDVHGIE 805 (826)
Q Consensus 798 p~~~H~~~ 805 (826)
|++||.+.
T Consensus 237 ~~agH~~~ 244 (305)
T 1tht_A 237 LGSSHDLG 244 (305)
T ss_dssp TTCCSCTT
T ss_pred CCCCCchh
Confidence 99999875
No 108
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.77 E-value=2.5e-17 Score=169.51 Aligned_cols=222 Identities=13% Similarity=0.136 Sum_probs=144.0
Q ss_pred eccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCC
Q 003363 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 647 (826)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~ 647 (826)
+...+|..++..... +.|+||++||++.. ...|...+..|+ +||.|+++|+||.+. +...
T Consensus 7 ~~~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~-~~~~vi~~d~~G~G~---S~~~------ 66 (262)
T 3r0v_A 7 VPSSDGTPIAFERSG--------SGPPVVLVGGALST--RAGGAPLAERLA-PHFTVICYDRRGRGD---SGDT------ 66 (262)
T ss_dssp EECTTSCEEEEEEEE--------CSSEEEEECCTTCC--GGGGHHHHHHHT-TTSEEEEECCTTSTT---CCCC------
T ss_pred EEcCCCcEEEEEEcC--------CCCcEEEECCCCcC--hHHHHHHHHHHh-cCcEEEEEecCCCcC---CCCC------
Confidence 344567777655442 24789999997765 456777888887 899999999999544 3211
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCch--hhhh
Q 003363 648 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWC--YVES 725 (826)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~--~~~~ 725 (826)
....++++.+.+..+++. ++ +++.|+|||+||.+++.++.++| +++++|+.+|........... ...+. ....
T Consensus 67 ~~~~~~~~~~~~~~~~~~--l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~-~~~~~~~~~~~ 141 (262)
T 3r0v_A 67 PPYAVEREIEDLAAIIDA--AG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPV-PPDYQTRLDAL 141 (262)
T ss_dssp SSCCHHHHHHHHHHHHHH--TT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCC-CTTHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHh--cC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchh-hhHHHHHHHHH
Confidence 123466666666666665 34 78999999999999999999999 999999999865432111000 00000 0000
Q ss_pred ccC--------cCCccCCCCCChhhHHHHh------------------------hcCcccccCCCCCcEEEEEeCCCCCC
Q 003363 726 YGS--------KGKDSFTESPSVEDLTRFH------------------------SKSPISHISKVKTPTIFLLGAQDLRV 773 (826)
Q Consensus 726 ~~~--------~~~~~~~~~~~~~~~~~~~------------------------~~sp~~~~~~i~~PvLii~G~~D~~v 773 (826)
... .........+ .+..+.+. ...+...+.++++|+|+++|++|..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~ 220 (262)
T 3r0v_A 142 LAEGRRGDAVTYFMTEGVGVP-PDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASISIPTLVMDGGASPAW 220 (262)
T ss_dssp HHTTCHHHHHHHHHHHTSCCC-HHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTCCSCEEEEECTTCCHH
T ss_pred hhccchhhHHHHHhhcccCCC-HHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcCCCCEEEEeecCCCCC
Confidence 000 0000000000 11111111 11234567788999999999999999
Q ss_pred CcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 774 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 774 p~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
|++.+..+.+.+.+ +++++++++||. +...++.+.+.+||++
T Consensus 221 ~~~~~~~~~~~~~~----~~~~~~~~~gH~----~~p~~~~~~i~~fl~~ 262 (262)
T 3r0v_A 221 IRHTAQELADTIPN----ARYVTLENQTHT----VAPDAIAPVLVEFFTR 262 (262)
T ss_dssp HHHHHHHHHHHSTT----EEEEECCCSSSS----CCHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHhCCC----CeEEEecCCCcc----cCHHHHHHHHHHHHhC
Confidence 99998888887754 799999999993 2455788889999864
No 109
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.77 E-value=1.1e-17 Score=173.70 Aligned_cols=231 Identities=16% Similarity=0.180 Sum_probs=137.1
Q ss_pred ccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCC
Q 003363 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (826)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~ 648 (826)
...+|..++...+. ..|.||++||.+.. ...|...+..|+++||.|+++|+||.| .+.. ...
T Consensus 4 ~~~~g~~l~y~~~G--------~g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G~G---~S~~-----~~~ 65 (271)
T 3ia2_A 4 VAKDGTQIYFKDWG--------SGKPVLFSHGWLLD--ADMWEYQMEYLSSRGYRTIAFDRRGFG---RSDQ-----PWT 65 (271)
T ss_dssp ECTTSCEEEEEEES--------SSSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTTST---TSCC-----CSS
T ss_pred EcCCCCEEEEEccC--------CCCeEEEECCCCCc--HHHHHHHHHHHHhCCceEEEecCCCCc---cCCC-----CCC
Confidence 34467777654432 23568999997655 567888889999999999999999954 4321 111
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHh-CCCceeEEEecCCccchhhhccC--CCCCC-ch---
Q 003363 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMVGT--TDIPD-WC--- 721 (826)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~p~~~~~~~~~~--~~~~~-~~--- 721 (826)
....+++.+.+..+++. ++.+++.|+||||||.+++.+++. .|++++++|+.++.......... ...+. ..
T Consensus 66 ~~~~~~~a~d~~~~l~~--l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (271)
T 3ia2_A 66 GNDYDTFADDIAQLIEH--LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVFARF 143 (271)
T ss_dssp CCSHHHHHHHHHHHHHH--HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH--hCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHHHHH
Confidence 22344444444444443 345789999999999877666554 58999999998764321100000 00000 00
Q ss_pred ----------hhhhccCcCCccC-CCCCChhh-------------------HHHHhhcCcccccCCCCCcEEEEEeCCCC
Q 003363 722 ----------YVESYGSKGKDSF-TESPSVED-------------------LTRFHSKSPISHISKVKTPTIFLLGAQDL 771 (826)
Q Consensus 722 ----------~~~~~~~~~~~~~-~~~~~~~~-------------------~~~~~~~sp~~~~~~i~~PvLii~G~~D~ 771 (826)
+...+........ ........ ...+...+....+.++++|+|+++|++|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lvi~G~~D~ 223 (271)
T 3ia2_A 144 KTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKIDVPTLVIHGDGDQ 223 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTCCSCEEEEEETTCS
T ss_pred HHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCCCCCEEEEEeCCCC
Confidence 0000000000000 00000000 00111222334467899999999999999
Q ss_pred CCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 772 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 772 ~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
.+|++.+.++.+.+.. ..+++++|++||.+... ...++.+.+.+||++
T Consensus 224 ~~p~~~~~~~~~~~~~---~~~~~~~~~~gH~~~~e-~p~~~~~~i~~Fl~~ 271 (271)
T 3ia2_A 224 IVPFETTGKVAAELIK---GAELKVYKDAPHGFAVT-HAQQLNEDLLAFLKR 271 (271)
T ss_dssp SSCGGGTHHHHHHHST---TCEEEEETTCCTTHHHH-THHHHHHHHHHHHTC
T ss_pred cCChHHHHHHHHHhCC---CceEEEEcCCCCccccc-CHHHHHHHHHHHhhC
Confidence 9999886555544432 37999999999987643 345788889999863
No 110
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.77 E-value=1e-17 Score=179.22 Aligned_cols=199 Identities=13% Similarity=0.157 Sum_probs=143.7
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch-------HHHHHHHHCCcEEEEECCCCCCCCchhhhhc------
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS-------KSLAFLSSVGYSLLIVNYRGSLGFGEEALQS------ 642 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~-------~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~------ 642 (826)
+...++.|.+ .+.|.||++||++.. ...|. ..+..|+++||.|+++|+||.+..+......
T Consensus 50 ~~~~~~~p~~----~~~~~vvl~HG~g~~--~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~ 123 (328)
T 1qlw_A 50 MYVRYQIPQR----AKRYPITLIHGCCLT--GMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLG 123 (328)
T ss_dssp EEEEEEEETT----CCSSCEEEECCTTCC--GGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTT
T ss_pred EEEEEEccCC----CCCccEEEEeCCCCC--CCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCccccccccc
Confidence 5555666752 234679999997754 34555 4788899999999999999965443321100
Q ss_pred ---------------------------CCCC-----CCcchHHH------------------HHHHHHHHHHcCCCCCCc
Q 003363 643 ---------------------------LPGK-----VGSQDVND------------------VLTAIDHVIDMGLANPSK 672 (826)
Q Consensus 643 ---------------------------~~~~-----~~~~~~~D------------------~~~~i~~l~~~~~~d~~r 672 (826)
.+.. +....+++ +.+++..+++.. ++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~----~~ 199 (328)
T 1qlw_A 124 KAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL----DG 199 (328)
T ss_dssp SSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH----TS
T ss_pred ccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh----CC
Confidence 0000 00000222 555666666552 38
Q ss_pred EEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcc
Q 003363 673 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPI 752 (826)
Q Consensus 673 v~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~ 752 (826)
+.|+|||+||.+++.++.++|++++++|+.+|... ..+.
T Consensus 200 ~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~-----------------------------------------~~~~ 238 (328)
T 1qlw_A 200 TVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC-----------------------------------------PKPE 238 (328)
T ss_dssp EEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC-----------------------------------------CCGG
T ss_pred ceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC-----------------------------------------CCHH
Confidence 99999999999999999999999999999987430 0001
Q ss_pred cccCCCCCcEEEEEeCCCCCCCc-----HHHHHHHHHHHhCCCCEEEEEeCCCC-----CCCCCCCCHHHHHHHHHHHHH
Q 003363 753 SHISKVKTPTIFLLGAQDLRVPV-----SNGLQYARALREKGVETKVIVFPNDV-----HGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 753 ~~~~~i~~PvLii~G~~D~~vp~-----~~~~~~~~~l~~~g~~~~~~~~p~~~-----H~~~~~~~~~~~~~~i~~w~~ 822 (826)
.....+++|+|++||++|..+|+ ++++.+++.+++.|.+++++++|++| |.+....+..++.+.+.+||+
T Consensus 239 ~~~~~~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~gi~G~~H~~~~~~~~~~~~~~i~~fl~ 318 (328)
T 1qlw_A 239 DVKPLTSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIG 318 (328)
T ss_dssp GCGGGTTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHTTCCEEEEEGGGGTCCCCCTTGGGSTTHHHHHHHHHHHHH
T ss_pred HHhhccCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHhCCCceEEEcCCCCcCCCcccchhccCHHHHHHHHHHHHH
Confidence 11223568999999999999997 99999999999989999999999665 988766656789999999999
Q ss_pred HHc
Q 003363 823 KYC 825 (826)
Q Consensus 823 ~~l 825 (826)
+++
T Consensus 319 ~~~ 321 (328)
T 1qlw_A 319 RNT 321 (328)
T ss_dssp HTC
T ss_pred hcc
Confidence 875
No 111
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=5.7e-17 Score=169.66 Aligned_cols=249 Identities=14% Similarity=0.164 Sum_probs=166.5
Q ss_pred EEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCC
Q 003363 99 WTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENES 178 (826)
Q Consensus 99 ~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~ 178 (826)
.....+||||+.+++.. ...++++++.+. ++..++.... ....+..++|||||++|++.....++.
T Consensus 44 v~~~~~spdg~~l~~~~----------~~~i~~~d~~~~-~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS----------EGLLYRLSLAGD-PSPEKVDTGF---ATICNNDHGISPDGALYAISDKVEFGK 109 (297)
T ss_dssp CEEEEECTTSSEEEEEE----------TTEEEEEESSSC-CSCEECCCTT---CCCBCSCCEECTTSSEEEEEECTTTSS
T ss_pred eEeeEECCCCCEEEEEc----------CCeEEEEeCCCC-CCceEecccc---ccccccceEECCCCCEEEEEEeCCCCc
Confidence 33455699999998852 236777776431 2333333221 013467789999999999998655456
Q ss_pred CeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcc
Q 003363 179 PIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 257 (826)
Q Consensus 179 ~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (826)
..+|.+. .++....+... ... ..+.|||||++|+|.+...
T Consensus 110 ~~l~~~~~~~~~~~~~~~~-~~~----------~~~~~spdg~~l~~~~~~~---------------------------- 150 (297)
T 2ojh_A 110 SAIYLLPSTGGTPRLMTKN-LPS----------YWHGWSPDGKSFTYCGIRD---------------------------- 150 (297)
T ss_dssp CEEEEEETTCCCCEECCSS-SSE----------EEEEECTTSSEEEEEEEET----------------------------
T ss_pred ceEEEEECCCCceEEeecC-CCc----------cceEECCCCCEEEEEECCC----------------------------
Confidence 7788877 44443333221 112 6789999999999876542
Q ss_pred eeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCce
Q 003363 258 DWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 337 (826)
Q Consensus 258 ~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l 337 (826)
+...||.+++.+++.+.+ ......+..+.|+|||+. |++.+.. +....|
T Consensus 151 -------------~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~----l~~~~~~------------~~~~~i 199 (297)
T 2ojh_A 151 -------------QVFDIYSMDIDSGVETRL--THGEGRNDGPDYSPDGRW----IYFNSSR------------TGQMQI 199 (297)
T ss_dssp -------------TEEEEEEEETTTCCEEEC--CCSSSCEEEEEECTTSSE----EEEEECT------------TSSCEE
T ss_pred -------------CceEEEEEECCCCcceEc--ccCCCccccceECCCCCE----EEEEecC------------CCCccE
Confidence 225788888888888887 455556788999999998 8887632 123478
Q ss_pred EEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCC
Q 003363 338 YAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF 417 (826)
Q Consensus 338 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~ 417 (826)
|.+++ .++....++.+......+.|||||++|++.+.+......+......|+++|+.+++..
T Consensus 200 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~ 262 (297)
T 2ojh_A 200 WRVRV-----------------DGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE 262 (297)
T ss_dssp EEEET-----------------TSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE
T ss_pred EEECC-----------------CCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce
Confidence 88887 6677788887777788899999999999998764211001113367999999876543
Q ss_pred CcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeC
Q 003363 418 SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 465 (826)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~ 465 (826)
.+.. +.. ....+..+.|+|||+.|++.+...
T Consensus 263 ~~~~-------~~~----------~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 263 TLFD-------LFG----------GQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEE-------EEE----------STTTSCSCCBCTTSSEEEEEEECC
T ss_pred eeec-------cCC----------CCcccccceECCCCCEEEEEEecc
Confidence 2221 100 011345789999999998887654
No 112
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.76 E-value=5.6e-17 Score=168.86 Aligned_cols=228 Identities=14% Similarity=0.148 Sum_probs=143.9
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cc-hHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCc
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SY-SKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~~-~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~ 649 (826)
+|.++ .+|.|.+ ++.|+||++|||++..... .+ ......+++.||.|+++|||+.+++ ...
T Consensus 13 ~~~~~--~~y~p~~----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~-----------~~p 75 (274)
T 2qru_A 13 NGATV--TIYPTTT----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT-----------KID 75 (274)
T ss_dssp TSCEE--EEECCSS----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS-----------CHH
T ss_pred CCeeE--EEEcCCC----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC-----------CCc
Confidence 34444 5677752 5689999999998754332 33 4456678889999999999985532 223
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHH---hCCCceeEEEecCCccchhhhccCC--CCCC--chh
Q 003363 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIG---QAPDKFVAAAARNPLCNLALMVGTT--DIPD--WCY 722 (826)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~---~~p~~~~a~v~~~p~~~~~~~~~~~--~~~~--~~~ 722 (826)
..++|+.++++|+.++.. ++++|+|+|+|+||.+++.++. ..+..++++++.+|..+........ ..+. -..
T Consensus 76 ~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (274)
T 2qru_A 76 HILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQAISAKE 154 (274)
T ss_dssp HHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSCCCSGG
T ss_pred HHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhccccccHHH
Confidence 358999999999998742 2789999999999999999887 3577889999888877622110000 0000 000
Q ss_pred hhhccCcCCccCCCCCC---hh---------hHHHHhhc--------Ccc--cccCCCCCcEEEEEeCCCCCCCcHHHHH
Q 003363 723 VESYGSKGKDSFTESPS---VE---------DLTRFHSK--------SPI--SHISKVKTPTIFLLGAQDLRVPVSNGLQ 780 (826)
Q Consensus 723 ~~~~~~~~~~~~~~~~~---~~---------~~~~~~~~--------sp~--~~~~~i~~PvLii~G~~D~~vp~~~~~~ 780 (826)
...... ......... .. .+..+... .++ ..+.++ +|+||++|+.|..++..++++
T Consensus 155 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-pP~li~~G~~D~~~~~~~~~~ 231 (274)
T 2qru_A 155 IAAIDQ--TKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDETLKTF-PPCFSTASSSDEEVPFRYSKK 231 (274)
T ss_dssp GTTSCC--SSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHHHHHTS-CCEEEEEETTCSSSCTHHHHH
T ss_pred Hhhhcc--cCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChhhhcCC-CCEEEEEecCCCCcCHHHHHH
Confidence 000000 000000000 00 00000000 001 123455 899999999999999888877
Q ss_pred HHHHHHhCCCCEEEEEeCCCCCCCCCCC---CHHHHHHHHHHHHHHH
Q 003363 781 YARALREKGVETKVIVFPNDVHGIERPQ---SDFESFLNIGLWFKKY 824 (826)
Q Consensus 781 ~~~~l~~~g~~~~~~~~p~~~H~~~~~~---~~~~~~~~i~~w~~~~ 824 (826)
+.+++. +++++++++++|++.... ...++.+.+.+||+++
T Consensus 232 l~~~~~----~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~~ 274 (274)
T 2qru_A 232 IGRTIP----ESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKER 274 (274)
T ss_dssp HHHHST----TCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHTC
T ss_pred HHHhCC----CcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhhC
Confidence 776654 479999999999985321 2235678899999764
No 113
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.76 E-value=4.1e-17 Score=177.38 Aligned_cols=245 Identities=13% Similarity=0.151 Sum_probs=153.3
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-----------cchHHHH---HHHHCCcEEEEECCCC--CCCC
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----------SYSKSLA---FLSSVGYSLLIVNYRG--SLGF 635 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-----------~~~~~~~---~la~~G~~Vl~~d~rG--~~g~ 635 (826)
+|..++...+.+. .....|+||++||.+...... .|...+. .|.+.||.|+++|+|| .+..
T Consensus 29 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~vi~~D~~G~~~G~s 105 (366)
T 2pl5_A 29 SPVVIAYETYGTL---SSSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDTNQYFIICSNVIGGCKGSS 105 (366)
T ss_dssp SSEEEEEEEEECC---CTTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSSSSS
T ss_pred cCceeeEEeccCc---CCCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccccccEEEEecCCCcccCCC
Confidence 3556666665543 223468899999977654310 3444442 3557899999999999 3433
Q ss_pred chhhhhcCCC---C----CCcchHHHHHHHHHHHHHcCCCCCCcE-EEEEecchHHHHHHHHHhCCCceeEEEecCCccc
Q 003363 636 GEEALQSLPG---K----VGSQDVNDVLTAIDHVIDMGLANPSKV-TVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN 707 (826)
Q Consensus 636 G~~~~~~~~~---~----~~~~~~~D~~~~i~~l~~~~~~d~~rv-~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~ 707 (826)
+.... .+. . .....++++.+.+..+++. ++.+++ .|+|||+||.+++.++.++|++++++|+.+|...
T Consensus 106 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 181 (366)
T 2pl5_A 106 GPLSI--HPETSTPYGSRFPFVSIQDMVKAQKLLVES--LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAE 181 (366)
T ss_dssp STTSB--CTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSB
T ss_pred CCCCC--CCCCCccccCCCCcccHHHHHHHHHHHHHH--cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCcc
Confidence 22110 000 0 0123577777777777766 455788 8999999999999999999999999999998654
Q ss_pred hhhhc---------cCCCCCCc-----------------------------hhhhhccCcC-----------Cc------
Q 003363 708 LALMV---------GTTDIPDW-----------------------------CYVESYGSKG-----------KD------ 732 (826)
Q Consensus 708 ~~~~~---------~~~~~~~~-----------------------------~~~~~~~~~~-----------~~------ 732 (826)
..... .....+.| .....+.... ..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (366)
T 2pl5_A 182 HSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQ 261 (366)
T ss_dssp CCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGST
T ss_pred CCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHH
Confidence 31100 00000000 0000000000 00
Q ss_pred --cCCCCCChhhH----HHHhhcCc------ccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEe-CC
Q 003363 733 --SFTESPSVEDL----TRFHSKSP------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF-PN 799 (826)
Q Consensus 733 --~~~~~~~~~~~----~~~~~~sp------~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~-p~ 799 (826)
.+......... ..+...+. ...+.++++|+|+++|++|..+|++.+.++.+.+...|..++++++ ++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (366)
T 2pl5_A 262 GESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNATCRFLVVSYSSDWLYPPAQSREIVKSLEAADKRVFYVELQSG 341 (366)
T ss_dssp TCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTCCSEEEEEEETTCCSSCHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred HHhhhcccChhHHHHHHhhhhhhccccccchhhhhccCCCCEEEEecCCCcccCHHHHHHHHHHhhhcccCeEEEEeCCC
Confidence 00000111111 11112221 2267889999999999999999999999999999976667899999 89
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 800 DVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 800 ~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
+||....... .++.+.|.+||+++
T Consensus 342 ~gH~~~~e~p-~~~~~~i~~fl~~~ 365 (366)
T 2pl5_A 342 EGHDSFLLKN-PKQIEILKGFLENP 365 (366)
T ss_dssp BSSGGGGSCC-HHHHHHHHHHHHCC
T ss_pred CCcchhhcCh-hHHHHHHHHHHccC
Confidence 9998775554 48889999999864
No 114
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=1.3e-17 Score=196.93 Aligned_cols=272 Identities=14% Similarity=0.116 Sum_probs=174.8
Q ss_pred cccEEEEeCCCCCeEEEEec--CCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeec--CCCCe-EEEEeec
Q 003363 154 TGASAVVPSPSGSKLLVVRN--PENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWN--SDETL-IAYVAEE 228 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wS--PDg~~-ia~~~~~ 228 (826)
..+..|++||| +++|++. .+++...+|.+..++..++++.....+...++..+ -..+.|| |||++ |||.+..
T Consensus 24 ~~~~~~~~s~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~SPDg~~~la~~~~~ 100 (662)
T 3azo_A 24 GRPACVGAVGD--EVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYS-GFPWAGVPRPAGGPLLVFTHFG 100 (662)
T ss_dssp SCCEEEEEETT--EEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTC-CCCEEEECCSSSSCEEEEEBTT
T ss_pred CccceeEEcCC--eEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccC-CccceeeeecCCCeEEEEEECC
Confidence 35788999854 7888876 33344445554445555555443222211111100 0145566 99999 9997532
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEcc--C-CceEeccCCC---CCCccceEEE
Q 003363 229 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ--S-GEVQAVKGIP---KSLSVGQVVW 302 (826)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~--~-g~~~~l~~~~---~~~~~~~~~w 302 (826)
...||+++++ + ++.+.++..+ ....+..++|
T Consensus 101 -------------------------------------------~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~ 137 (662)
T 3azo_A 101 -------------------------------------------DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVL 137 (662)
T ss_dssp -------------------------------------------TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEE
T ss_pred -------------------------------------------CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEE
Confidence 2569999998 5 8888884222 3446778999
Q ss_pred eeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCC------CcceecC-CCCcccc
Q 003363 303 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED------LPVVNLT-ESISSAF 375 (826)
Q Consensus 303 SPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~------~~~~~Lt-~~~~~~~ 375 (826)
||||+. |+|++....... .......||++|+ ++ ++.++|+ .+.....
T Consensus 138 spDg~~----l~~~~~~~~~~~-----~~~~~~~i~~~~~-----------------~~~~~~~~~~~~~l~~~~~~~~~ 191 (662)
T 3azo_A 138 LPERGE----VWCMAEEFTGEG-----PSDVRRFLAAVPL-----------------DGSAAADRSAVRELSDDAHRFVT 191 (662)
T ss_dssp ETTTTE----EEEEEEEECSSS-----TTCEEEEEEEEET-----------------TSTTTTCGGGSEESSCSCSSEEC
T ss_pred CCCCCE----EEEEEecccCCC-----CCCceeEEEEEEC-----------------CCCccccCCceeEEEecCCCccc
Confidence 999999 999874311000 0012248999998 66 7788888 7767788
Q ss_pred CceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCC-CC---CCCCcccceeeeeeeeeccCCCCCcccccCCCCCCcc
Q 003363 376 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP-TN---GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW 451 (826)
Q Consensus 376 ~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~-~~---~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~w 451 (826)
.|+|||||++|+|.+.+.. +......+||++|+. ++ ..+.++... ......+.|
T Consensus 192 ~~~~SpDG~~la~~~~~~~---~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-------------------~~~~~~~~~ 249 (662)
T 3azo_A 192 GPRLSPDGRQAVWLAWDHP---RMPWEGTELKTARVTEDGRFADTRTLLGGP-------------------EEAIAQAEW 249 (662)
T ss_dssp CCEECTTSSEEEEEEECTT---CCTTTCEEEEEEEECTTSCEEEEEEEEEET-------------------TBCEEEEEE
T ss_pred CceECCCCCEEEEEECCCC---CCCCCCcEEEEEEECCCCcccccEEeCCCC-------------------CceEcceEE
Confidence 9999999999999986642 111234689999998 44 222221110 012346789
Q ss_pred ccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCe---------eeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 452 LSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNF---------SWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 452 s~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~---------~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
+|||+ ++|.+..++...||.+|+++++.++++...... ....+++++. +++.... .-.+|+.+++.+
T Consensus 250 spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~--~~~~l~~~d~~~ 325 (662)
T 3azo_A 250 APDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK--GAAVLGILDPES 325 (662)
T ss_dssp CTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS--SSCEEEEEETTT
T ss_pred CCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCE-EEEEEEc--CccEEEEEECCC
Confidence 99999 888877777779999999999999998754432 1234445554 6666665 556788888654
Q ss_pred c
Q 003363 523 K 523 (826)
Q Consensus 523 ~ 523 (826)
+
T Consensus 326 ~ 326 (662)
T 3azo_A 326 G 326 (662)
T ss_dssp T
T ss_pred C
Confidence 3
No 115
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.75 E-value=1.2e-17 Score=177.62 Aligned_cols=210 Identities=16% Similarity=0.176 Sum_probs=138.5
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (826)
.|+||++||++.. ...|...+..|++ ||.|+++|+||.+... .......++++.+.+..+++. ++.+
T Consensus 68 ~p~vv~lhG~~~~--~~~~~~~~~~L~~-~~~v~~~D~~G~G~S~--------~~~~~~~~~~~~~dl~~~l~~--l~~~ 134 (314)
T 3kxp_A 68 GPLMLFFHGITSN--SAVFEPLMIRLSD-RFTTIAVDQRGHGLSD--------KPETGYEANDYADDIAGLIRT--LARG 134 (314)
T ss_dssp SSEEEEECCTTCC--GGGGHHHHHTTTT-TSEEEEECCTTSTTSC--------CCSSCCSHHHHHHHHHHHHHH--HTSS
T ss_pred CCEEEEECCCCCC--HHHHHHHHHHHHc-CCeEEEEeCCCcCCCC--------CCCCCCCHHHHHHHHHHHHHH--hCCC
Confidence 5799999997755 4567777888876 6999999999954432 122233566666666666665 2347
Q ss_pred cEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc--------cCC--CCCCchhhhhccCcCCccCCCCCChh
Q 003363 672 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV--------GTT--DIPDWCYVESYGSKGKDSFTESPSVE 741 (826)
Q Consensus 672 rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~--------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (826)
+++|+|||+||.+++.++.++|++++++|+.+|........ ... ....+.....+.. ..+... ..+
T Consensus 135 ~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~ 210 (314)
T 3kxp_A 135 HAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFEDIKAVEAYLA---GRYPNI-PAD 210 (314)
T ss_dssp CEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBSSHHHHHHHHH---HHSTTS-CHH
T ss_pred CcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhcCHHHHHHHHH---hhcccC-chH
Confidence 89999999999999999999999999999998764321110 000 0000000000000 000000 001
Q ss_pred hHHHH---------------------------hhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEE
Q 003363 742 DLTRF---------------------------HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 794 (826)
Q Consensus 742 ~~~~~---------------------------~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 794 (826)
....+ ...+....+.++++|+|+++|++|..+|++.+.++.+.++. +++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~----~~~ 286 (314)
T 3kxp_A 211 AIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPD----LPV 286 (314)
T ss_dssp HHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHCCSCEEEEEETTCSSSCHHHHHHHHHHCTT----SCE
T ss_pred HHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcCCCCEEEEecCCCccCCHHHHHHHHHhCCC----ceE
Confidence 11111 01134445677899999999999999999999888887754 688
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 795 IVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 795 ~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
+++|++||.+.... ..++.+.+.+||++
T Consensus 287 ~~~~g~gH~~~~e~-~~~~~~~i~~fl~~ 314 (314)
T 3kxp_A 287 VVVPGADHYVNEVS-PEITLKAITNFIDA 314 (314)
T ss_dssp EEETTCCSCHHHHC-HHHHHHHHHHHHHC
T ss_pred EEcCCCCCcchhhC-HHHHHHHHHHHHhC
Confidence 99999999875333 44788889999864
No 116
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.75 E-value=5.5e-18 Score=175.92 Aligned_cols=219 Identities=16% Similarity=0.208 Sum_probs=141.8
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (826)
...|+||++||.+.. ...|...+..|++ +|.|+++|+||. |.+... ......++++.+.+..+++. ++
T Consensus 13 ~~~~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G~---G~S~~~----~~~~~~~~~~a~dl~~~l~~--l~ 80 (268)
T 3v48_A 13 ADAPVVVLISGLGGS--GSYWLPQLAVLEQ-EYQVVCYDQRGT---GNNPDT----LAEDYSIAQMAAELHQALVA--AG 80 (268)
T ss_dssp TTCCEEEEECCTTCC--GGGGHHHHHHHHT-TSEEEECCCTTB---TTBCCC----CCTTCCHHHHHHHHHHHHHH--TT
T ss_pred CCCCEEEEeCCCCcc--HHHHHHHHHHHhh-cCeEEEECCCCC---CCCCCC----ccccCCHHHHHHHHHHHHHH--cC
Confidence 346889999997655 5678888888865 699999999994 443211 11223566777666666665 34
Q ss_pred CCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhcc-----------CC-------------CCCCchhh--
Q 003363 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-----------TT-------------DIPDWCYV-- 723 (826)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~-----------~~-------------~~~~~~~~-- 723 (826)
.+++.|+||||||.+++.++.++|++++++|+.++......... .. ....|...
T Consensus 81 ~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (268)
T 3v48_A 81 IEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARA 160 (268)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTTH
T ss_pred CCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhccc
Confidence 57899999999999999999999999999999887532210000 00 00000000
Q ss_pred hhccCcCCccCCCCCChhh----HHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 003363 724 ESYGSKGKDSFTESPSVED----LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 799 (826)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~----~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~ 799 (826)
................... ...+...+....+.++++|+|+++|++|..+|+..++.+.+.+.. .+++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~l~~~~p~----~~~~~~~~ 236 (268)
T 3v48_A 161 PRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPD----SQKMVMPY 236 (268)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGCCSCEEEEEETTCSSSCTHHHHHHHHHCSS----EEEEEESS
T ss_pred ccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcCCCCeEEEEeCCCcccCHHHHHHHHHhCCc----CeEEEeCC
Confidence 0000000000000000000 111122333455778999999999999999999999888887764 78999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 800 DVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 800 ~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
+||..... ....+...|.+|+.+.+
T Consensus 237 ~GH~~~~e-~p~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 237 GGHACNVT-DPETFNALLLNGLASLL 261 (268)
T ss_dssp CCTTHHHH-CHHHHHHHHHHHHHHHH
T ss_pred CCcchhhc-CHHHHHHHHHHHHHHhc
Confidence 99976544 34478889999998753
No 117
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.75 E-value=2.2e-17 Score=172.58 Aligned_cols=212 Identities=20% Similarity=0.281 Sum_probs=131.0
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (826)
.|.||++||.+.. ...|...+..|+++||.|+++|+||. |.+.. .......+++.+.+..+++. ++.+
T Consensus 27 g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G~---G~S~~-----~~~~~~~~~~a~dl~~ll~~--l~~~ 94 (281)
T 3fob_A 27 GKPVVLIHGWPLS--GRSWEYQVPALVEAGYRVITYDRRGF---GKSSQ-----PWEGYEYDTFTSDLHQLLEQ--LELQ 94 (281)
T ss_dssp SEEEEEECCTTCC--GGGGTTTHHHHHHTTEEEEEECCTTS---TTSCC-----CSSCCSHHHHHHHHHHHHHH--TTCC
T ss_pred CCeEEEECCCCCc--HHHHHHHHHHHHhCCCEEEEeCCCCC---CCCCC-----CccccCHHHHHHHHHHHHHH--cCCC
Confidence 3678999998765 45677788899999999999999994 44321 11223455655555556555 3457
Q ss_pred cEEEEEecchHHHHHHHHHh-CCCceeEEEecCCccchhhhc-cCCC-CCCch---------------hhhh----ccCc
Q 003363 672 KVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMV-GTTD-IPDWC---------------YVES----YGSK 729 (826)
Q Consensus 672 rv~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~p~~~~~~~~-~~~~-~~~~~---------------~~~~----~~~~ 729 (826)
++.|+||||||.+++.+++. +|++++++|+.++........ .... ..... +... +...
T Consensus 95 ~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (281)
T 3fob_A 95 NVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSEDHPEGALDDATIETFKSGVINDRLAFLDEFTKGFFAA 174 (281)
T ss_dssp SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSSTTCSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTCB
T ss_pred cEEEEEECccHHHHHHHHHHccccceeEEEEecCCCcchhccccccccccchhHHHHHHHHhhhhHHHHHHHHHHHhccc
Confidence 89999999999887776655 589999999887642110000 0000 00000 0000 0000
Q ss_pred CCccCCCCCChhh-------------------HHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHH-HHHHHHHHhCC
Q 003363 730 GKDSFTESPSVED-------------------LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKG 789 (826)
Q Consensus 730 ~~~~~~~~~~~~~-------------------~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~-~~~~~~l~~~g 789 (826)
.. ......... ...+...+....+.++++|+|+++|++|..+|++.+ ..+.+.+.
T Consensus 175 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~p--- 249 (281)
T 3fob_A 175 GD--RTDLVSESFRLYNWDIAAGASPKGTLDCITAFSKTDFRKDLEKFNIPTLIIHGDSDATVPFEYSGKLTHEAIP--- 249 (281)
T ss_dssp TT--BCCSSCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHST---
T ss_pred cc--ccccchHHHHHHhhhhhcccChHHHHHHHHHccccchhhhhhhcCCCEEEEecCCCCCcCHHHHHHHHHHhCC---
Confidence 00 000000000 011112233455788999999999999999999876 44444444
Q ss_pred CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 003363 790 VETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 790 ~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~ 822 (826)
+.++++++++||...... ..++.+.+.+||+
T Consensus 250 -~~~~~~i~~~gH~~~~e~-p~~~~~~i~~Fl~ 280 (281)
T 3fob_A 250 -NSKVALIKGGPHGLNATH-AKEFNEALLLFLK 280 (281)
T ss_dssp -TCEEEEETTCCTTHHHHT-HHHHHHHHHHHHC
T ss_pred -CceEEEeCCCCCchhhhh-HHHHHHHHHHHhh
Confidence 379999999999875433 4478888888885
No 118
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.75 E-value=1.5e-17 Score=173.40 Aligned_cols=213 Identities=18% Similarity=0.259 Sum_probs=133.6
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCc
Q 003363 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 672 (826)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 672 (826)
|.||++||.+.. ...|...+..|+++||.|+++|+||. |.+... .....++++.+.+..+++. ++.++
T Consensus 24 ~pvvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G~---G~S~~~-----~~~~~~~~~a~dl~~~l~~--l~~~~ 91 (277)
T 1brt_A 24 QPVVLIHGFPLS--GHSWERQSAALLDAGYRVITYDRRGF---GQSSQP-----TTGYDYDTFAADLNTVLET--LDLQD 91 (277)
T ss_dssp SEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTS---TTSCCC-----SSCCSHHHHHHHHHHHHHH--HTCCS
T ss_pred CeEEEECCCCCc--HHHHHHHHHHHhhCCCEEEEeCCCCC---CCCCCC-----CCCccHHHHHHHHHHHHHH--hCCCc
Confidence 459999997754 56788889999999999999999994 443211 1123344444444444443 23478
Q ss_pred EEEEEecchHHHHHHHHHhCCC-ceeEEEecCCccchhhhccC-CC--CC-Cch-------------hhhhccCcCCcc-
Q 003363 673 VTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALMVGT-TD--IP-DWC-------------YVESYGSKGKDS- 733 (826)
Q Consensus 673 v~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~p~~~~~~~~~~-~~--~~-~~~-------------~~~~~~~~~~~~- 733 (826)
+.|+||||||.+++.++.++|+ +++++|+.+|.......... .. .+ ... ....+.......
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (277)
T 1brt_A 92 AVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKADRYAFYTGFFNDFYNLD 171 (277)
T ss_dssp EEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHTTHH
T ss_pred eEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHHHHHHHHhcCchhhHHHHHHHHhhcc
Confidence 9999999999999999999999 99999999874321100000 00 00 000 000000000000
Q ss_pred --CCCCCChhhHHHHh------------------hcCcccccCCCCCcEEEEEeCCCCCCCcHHH-HHHHHHHHhCCCCE
Q 003363 734 --FTESPSVEDLTRFH------------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNG-LQYARALREKGVET 792 (826)
Q Consensus 734 --~~~~~~~~~~~~~~------------------~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~-~~~~~~l~~~g~~~ 792 (826)
.......+..+.+. ..+....+.++++|+|+++|++|..+|++.+ ..+.+.+.. .
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~----~ 247 (277)
T 1brt_A 172 ENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHGTGDRTLPIENTARVFHKALPS----A 247 (277)
T ss_dssp HHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGGCCSCEEEEEETTCSSSCGGGTHHHHHHHCTT----S
T ss_pred ccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhcccCCCCeEEEecCCCccCChHHHHHHHHHHCCC----C
Confidence 00001111111110 1122335678899999999999999999887 777777653 6
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 003363 793 KVIVFPNDVHGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 793 ~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~ 822 (826)
++++++++||..... ...++.+.|.+||+
T Consensus 248 ~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 276 (277)
T 1brt_A 248 EYVEVEGAPHGLLWT-HAEEVNTALLAFLA 276 (277)
T ss_dssp EEEEETTCCTTHHHH-THHHHHHHHHHHHH
T ss_pred cEEEeCCCCcchhhh-CHHHHHHHHHHHHh
Confidence 899999999986543 34578888999986
No 119
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.75 E-value=8e-17 Score=167.55 Aligned_cols=231 Identities=15% Similarity=0.180 Sum_probs=137.8
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCc
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~ 649 (826)
..+|..++...+.|+ +.|.||++||.+.. ...|...+..|+++||.|+++|+||.|. +... ...
T Consensus 5 ~~~g~~l~y~~~g~~------~~~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G~G~---S~~~-----~~~ 68 (275)
T 1a88_A 5 TSDGTNIFYKDWGPR------DGLPVVFHHGWPLS--ADDWDNQMLFFLSHGYRVIAHDRRGHGR---SDQP-----STG 68 (275)
T ss_dssp CTTSCEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTT---SCCC-----SSC
T ss_pred ccCCCEEEEEEcCCC------CCceEEEECCCCCc--hhhHHHHHHHHHHCCceEEEEcCCcCCC---CCCC-----CCC
Confidence 345667765555332 23679999997654 5578888899999999999999999544 3211 112
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhC-CCceeEEEecCCccchhhhccC-C-CCCCchh----
Q 003363 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGT-T-DIPDWCY---- 722 (826)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~~~~~~-~-~~~~~~~---- 722 (826)
..++++.+.+..+++. ++.+++.|+||||||.+++.+++++ |++++++|+.++.......... . ..+....
T Consensus 69 ~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (275)
T 1a88_A 69 HDMDTYAADVAALTEA--LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSDTNPDGLPLEVFDEFR 146 (275)
T ss_dssp CSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCCCSCCBCBTTBTTSBCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--cCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCCCcccccCccCcccCCHHHHHHHH
Confidence 2344444444444443 2346899999999999999877776 9999999998864321000000 0 0000000
Q ss_pred ----------hhhccC-c--CCccCCCCCChhhHHH-------------------HhhcCcccccCCCCCcEEEEEeCCC
Q 003363 723 ----------VESYGS-K--GKDSFTESPSVEDLTR-------------------FHSKSPISHISKVKTPTIFLLGAQD 770 (826)
Q Consensus 723 ----------~~~~~~-~--~~~~~~~~~~~~~~~~-------------------~~~~sp~~~~~~i~~PvLii~G~~D 770 (826)
...+.. . ...........+.... +...+....+.++++|+|+++|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 226 (275)
T 1a88_A 147 AALAANRAQFYIDVPSGPFYGFNREGATVSQGLIDHWWLQGMMGAANAHYECIAAFSETDFTDDLKRIDVPVLVAHGTDD 226 (275)
T ss_dssp HHHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHHCCSCEEEEEETTC
T ss_pred HHHhhhHHHHHHhhhccccccccCcccccCHHHHHHHHHHhhhcchHhHHHHHhhhhhcccccccccCCCCEEEEecCCC
Confidence 000000 0 0000000011111111 1112223345678999999999999
Q ss_pred CCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 003363 771 LRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 771 ~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~ 822 (826)
..+|+....+.+..+. .++++++++++||.+... ...++.+.+.+||+
T Consensus 227 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~ 274 (275)
T 1a88_A 227 QVVPYADAAPKSAELL---ANATLKSYEGLPHGMLST-HPEVLNPDLLAFVK 274 (275)
T ss_dssp SSSCSTTTHHHHHHHS---TTEEEEEETTCCTTHHHH-CHHHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHhhC---CCcEEEEcCCCCccHHHh-CHHHHHHHHHHHhh
Confidence 9999875444333332 248999999999987543 44578888999986
No 120
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.75 E-value=1.3e-17 Score=172.44 Aligned_cols=221 Identities=14% Similarity=0.096 Sum_probs=139.8
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCC
Q 003363 589 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 668 (826)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 668 (826)
....|+||++||.+.. ...|...+..|+++||.|+++|+||.+.+.... .....+++..+.+..+++.- -
T Consensus 9 ~~~~~~vvllHG~~~~--~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~l~~l-~ 78 (267)
T 3sty_A 9 PFVKKHFVLVHAAFHG--AWCWYKIVALMRSSGHNVTALDLGASGINPKQA-------LQIPNFSDYLSPLMEFMASL-P 78 (267)
T ss_dssp -CCCCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTCSCCG-------GGCCSHHHHHHHHHHHHHTS-C
T ss_pred CCCCCeEEEECCCCCC--cchHHHHHHHHHhcCCeEEEeccccCCCCCCcC-------CccCCHHHHHHHHHHHHHhc-C
Confidence 4567899999997755 567888999999999999999999954432211 11134566666555555552 1
Q ss_pred CCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhh-----ccCC--CCCCchhhhhc-cC--cC--------
Q 003363 669 NPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALM-----VGTT--DIPDWCYVESY-GS--KG-------- 730 (826)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~-----~~~~--~~~~~~~~~~~-~~--~~-------- 730 (826)
+.+++.|+|||+||.+++.++.++|++++++|+.++....... .... ....|...... .. ..
T Consensus 79 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
T 3sty_A 79 ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAG 158 (267)
T ss_dssp TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECC
T ss_pred CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhh
Confidence 4689999999999999999999999999999998875432110 0000 00111000000 00 00
Q ss_pred ----CccCCCCCChhhHHH---------------HhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCC
Q 003363 731 ----KDSFTESPSVEDLTR---------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 791 (826)
Q Consensus 731 ----~~~~~~~~~~~~~~~---------------~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~ 791 (826)
...+......+.... +............++|+|+++|++|..+|++....+.+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---- 234 (267)
T 3sty_A 159 PKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPP---- 234 (267)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCCCTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSCC----
T ss_pred HHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhcccccccCCCEEEEEeCCCCccCHHHHHHHHHhCCC----
Confidence 000011111111111 111112222222358999999999999999988888877754
Q ss_pred EEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 792 TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 792 ~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
++++++|++||..... ...++...+.+|++++
T Consensus 235 ~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~~~ 266 (267)
T 3sty_A 235 DEVKEIEGSDHVTMMS-KPQQLFTTLLSIANKY 266 (267)
T ss_dssp SEEEECTTCCSCHHHH-SHHHHHHHHHHHHHHC
T ss_pred ceEEEeCCCCcccccc-ChHHHHHHHHHHHHhc
Confidence 6899999999986543 3457888999999874
No 121
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.75 E-value=1.7e-17 Score=170.01 Aligned_cols=216 Identities=17% Similarity=0.245 Sum_probs=135.5
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch-HHHHHHHHHHHHHcCCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD-VNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~-~~D~~~~i~~l~~~~~~d~ 670 (826)
.|.||++||.+.. ...|...+..|+++||.|+++|+||.| .+..... .+.... .+|+.++++++.+.+ .
T Consensus 16 ~~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~GhG---~s~~~~~--~~~~~~~~~d~~~~~~~l~~~~---~ 85 (247)
T 1tqh_A 16 ERAVLLLHGFTGN--SADVRMLGRFLESKGYTCHAPIYKGHG---VPPEELV--HTGPDDWWQDVMNGYEFLKNKG---Y 85 (247)
T ss_dssp SCEEEEECCTTCC--THHHHHHHHHHHHTTCEEEECCCTTSS---SCHHHHT--TCCHHHHHHHHHHHHHHHHHHT---C
T ss_pred CcEEEEECCCCCC--hHHHHHHHHHHHHCCCEEEecccCCCC---CCHHHhc--CCCHHHHHHHHHHHHHHHHHcC---C
Confidence 3679999997654 456777888999999999999999954 3221111 111111 456666667766553 3
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchh---hhccCCCCCCc--hhhhhccC------cCCccCCCCC-
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---LMVGTTDIPDW--CYVESYGS------KGKDSFTESP- 738 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~---~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~- 738 (826)
+++.|+||||||.+++.++.++| ++++|+.++..... ..... ...+ .+...... .....+...+
T Consensus 86 ~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (247)
T 1tqh_A 86 EKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEG--VLEYAREYKKREGKSEEQIEQEMEKFKQTPM 161 (247)
T ss_dssp CCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHH--HHHHHHHHHHHHTCCHHHHHHHHHHHTTSCC
T ss_pred CeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHH--HHHHHHHhhcccccchHHHHhhhhcccCCCH
Confidence 68999999999999999999998 77777654322100 00000 0000 00000000 0000000000
Q ss_pred -ChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHH
Q 003363 739 -SVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNI 817 (826)
Q Consensus 739 -~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i 817 (826)
.......+. .+....+.++++|+|+++|++|..+|++.++.+++.++. ..++++++|++||.....+...++.+.+
T Consensus 162 ~~~~~~~~~~-~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e~~~~~~~~~i 238 (247)
T 1tqh_A 162 KTLKALQELI-ADVRDHLDLIYAPTFVVQARHDEMINPDSANIIYNEIES--PVKQIKWYEQSGHVITLDQEKDQLHEDI 238 (247)
T ss_dssp TTHHHHHHHH-HHHHHTGGGCCSCEEEEEETTCSSSCTTHHHHHHHHCCC--SSEEEEEETTCCSSGGGSTTHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHhhcccCCCCEEEEecCCCCCCCcchHHHHHHhcCC--CceEEEEeCCCceeeccCccHHHHHHHH
Confidence 011111110 122345778999999999999999999999888887753 2479999999999877655556888999
Q ss_pred HHHHHHH
Q 003363 818 GLWFKKY 824 (826)
Q Consensus 818 ~~w~~~~ 824 (826)
.+||++.
T Consensus 239 ~~Fl~~~ 245 (247)
T 1tqh_A 239 YAFLESL 245 (247)
T ss_dssp HHHHHHS
T ss_pred HHHHHhc
Confidence 9999863
No 122
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.75 E-value=8e-17 Score=167.34 Aligned_cols=215 Identities=19% Similarity=0.292 Sum_probs=130.7
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (826)
.|.||++||.+.. ...|...+..|+++||.|+++|+||.| .+.. + .....++++.+.+..+++. ++.+
T Consensus 19 ~~~vvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G~G---~S~~---~--~~~~~~~~~~~dl~~~l~~--l~~~ 86 (273)
T 1a8s_A 19 GQPIVFSHGWPLN--ADSWESQMIFLAAQGYRVIAHDRRGHG---RSSQ---P--WSGNDMDTYADDLAQLIEH--LDLR 86 (273)
T ss_dssp SSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTST---TSCC---C--SSCCSHHHHHHHHHHHHHH--TTCC
T ss_pred CCEEEEECCCCCc--HHHHhhHHhhHhhCCcEEEEECCCCCC---CCCC---C--CCCCCHHHHHHHHHHHHHH--hCCC
Confidence 3679999997654 557888889999999999999999954 4321 1 1123455555555555554 3457
Q ss_pred cEEEEEecchHHHHHHHHHhC-CCceeEEEecCCccchhhhccC-CC-CCCchh--------------hhhccC-c--CC
Q 003363 672 KVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGT-TD-IPDWCY--------------VESYGS-K--GK 731 (826)
Q Consensus 672 rv~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~~~~~~-~~-~~~~~~--------------~~~~~~-~--~~ 731 (826)
++.|+||||||.+++.+++++ |++++++|+.++.......... .. .+.... ...+.. . ..
T Consensus 87 ~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (273)
T 1a8s_A 87 DAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEANPGGLPMEVFDGIRQASLADRSQLYKDLASGPFFGF 166 (273)
T ss_dssp SEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSSST
T ss_pred CeEEEEeChHHHHHHHHHHhcCchheeEEEEEcccCcccccCccccccCcHHHHHHHHHHhHhhHHHHHHHhhcccccCc
Confidence 899999999999999877765 9999999998864211000000 00 000000 000000 0 00
Q ss_pred ccCCCCCChhhHHH-------------------HhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCE
Q 003363 732 DSFTESPSVEDLTR-------------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVET 792 (826)
Q Consensus 732 ~~~~~~~~~~~~~~-------------------~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~ 792 (826)
.........+.... +...+....+.++++|+|+++|++|..+|++...+....+. .+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~---~~~ 243 (273)
T 1a8s_A 167 NQPGAKSSAGMVDWFWLQGMAAGHKNAYDCIKAFSETDFTEDLKKIDVPTLVVHGDADQVVPIEASGIASAALV---KGS 243 (273)
T ss_dssp TSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCCCHHHHHTCCSCEEEEEETTCSSSCSTTTHHHHHHHS---TTC
T ss_pred CCcccccCHHHHHHHHHhccccchhHHHHHHHHHhccChhhhhhcCCCCEEEEECCCCccCChHHHHHHHHHhC---CCc
Confidence 00000011111110 11122334567899999999999999999885444433332 247
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 003363 793 KVIVFPNDVHGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 793 ~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~ 822 (826)
++++++++||.+... ...++.+.+.+||+
T Consensus 244 ~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~ 272 (273)
T 1a8s_A 244 TLKIYSGAPHGLTDT-HKDQLNADLLAFIK 272 (273)
T ss_dssp EEEEETTCCSCHHHH-THHHHHHHHHHHHH
T ss_pred EEEEeCCCCCcchhh-CHHHHHHHHHHHHh
Confidence 899999999987543 44578888999986
No 123
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.75 E-value=8.8e-18 Score=195.15 Aligned_cols=234 Identities=17% Similarity=0.104 Sum_probs=160.2
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 003363 156 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (826)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~ 235 (826)
+...++||||++|||++..+ +..++|.+ ++++.++++.... +.+ ..++|||| +|+|.+....
T Consensus 24 ~~~~~~~~DG~~la~~s~~~-g~~~lw~~-~~g~~~~lt~~~~---~~~------~~~~~spd--~~l~~~~~~~----- 85 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSE-GSVNAYLY-DGGETVKLNREPI---NSV------LDPHYGVG--RVILVRDVSK----- 85 (582)
T ss_dssp EEEEEEEETTTEEEEEEEET-TEEEEEEE-ETTEEEECCSSCC---SEE------CEECTTCS--EEEEEEECST-----
T ss_pred hheeecCCCCCeEEEEEccC-CceeEEEE-cCCCcEeeecccc---ccc------ccccCCCC--eEEEEeccCC-----
Confidence 78889999999999998754 44556655 5666666654331 122 78999999 6888765410
Q ss_pred ccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEc--cCCceEeccCCCCCCccceEEEeeCCCCCccEE
Q 003363 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI--NSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (826)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~--~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (826)
| .....||++++ +++.. .++ ... .....+|||||+. +
T Consensus 86 ----------------------------g-----~~~~~l~~~~~~~~g~~~-~l~--~~~-~~~~~~~s~dg~~----~ 124 (582)
T 3o4h_A 86 ----------------------------G-----AEQHALFKVNTSRPGEEQ-RLE--AVK-PMRILSGVDTGEA----V 124 (582)
T ss_dssp ----------------------------T-----SCCEEEEEEETTSTTCCE-ECT--TSC-SBEEEEEEECSSC----E
T ss_pred ----------------------------C-----CcceEEEEEeccCCCccc-ccc--CCC-CceeeeeCCCCCe----E
Confidence 0 02357999998 65554 552 222 2336799999999 9
Q ss_pred EEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccC
Q 003363 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 393 (826)
Q Consensus 314 vf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~ 393 (826)
+|++...+ .+.++|+ ++++.++++.... .++.|||||++|+|.+.+.
T Consensus 125 ~~~s~~~~--------------~~~l~d~-----------------~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~ 171 (582)
T 3o4h_A 125 VFTGATED--------------RVALYAL-----------------DGGGLRELARLPG--FGFVSDIRGDLIAGLGFFG 171 (582)
T ss_dssp EEEEECSS--------------CEEEEEE-----------------ETTEEEEEEEESS--CEEEEEEETTEEEEEEEEE
T ss_pred EEEecCCC--------------CceEEEc-----------------cCCcEEEeecCCC--ceEEECCCCCEEEEEEEcC
Confidence 99873322 3446687 6778888876544 7899999999999998764
Q ss_pred CCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003363 394 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (826)
Q Consensus 394 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~v 473 (826)
.+...||++|+.+++.+.++.... ....++|||||+.|+ .+...+...||++
T Consensus 172 -------~~~~~i~~~d~~~g~~~~l~~~~~--------------------~~~~~~~SpDG~~l~-~~~~~~~~~i~~~ 223 (582)
T 3o4h_A 172 -------GGRVSLFTSNLSSGGLRVFDSGEG--------------------SFSSASISPGMKVTA-GLETAREARLVTV 223 (582)
T ss_dssp -------TTEEEEEEEETTTCCCEEECCSSC--------------------EEEEEEECTTSCEEE-EEECSSCEEEEEE
T ss_pred -------CCCeEEEEEcCCCCCceEeecCCC--------------------ccccceECCCCCEEE-EccCCCeeEEEEE
Confidence 123569999999877655443221 123678999999887 5555666799999
Q ss_pred ECCCCcEEEecCCCCCeeeEE--------EeecCCEEEEEEeCCC
Q 003363 474 NVSSGELLRITPAESNFSWSL--------LTLDGDNIIAVSSSPV 510 (826)
Q Consensus 474 dl~tg~~~~lt~~~~~~~~~~--------~s~dg~~l~~~~s~~~ 510 (826)
|+++|+.+.++.....+.... |++|| .+++..+...
T Consensus 224 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g 267 (582)
T 3o4h_A 224 DPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREG 267 (582)
T ss_dssp CTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETT
T ss_pred cCCCCcEEEccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCC
Confidence 999999883333333233334 89999 6776665443
No 124
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.75 E-value=1.2e-17 Score=165.21 Aligned_cols=187 Identities=13% Similarity=0.073 Sum_probs=120.0
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHC--CcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~--G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (826)
.|+|||+||...+..........+++.++ +|.|+++|++| +|.+ ..+.++.+++. .+
T Consensus 2 mptIl~lHGf~ss~~s~k~~~l~~~~~~~~~~~~v~~pdl~~---~g~~----------------~~~~l~~~~~~--~~ 60 (202)
T 4fle_A 2 MSTLLYIHGFNSSPSSAKATTFKSWLQQHHPHIEMQIPQLPP---YPAE----------------AAEMLESIVMD--KA 60 (202)
T ss_dssp -CEEEEECCTTCCTTCHHHHHHHHHHHHHCTTSEEECCCCCS---SHHH----------------HHHHHHHHHHH--HT
T ss_pred CcEEEEeCCCCCCCCccHHHHHHHHHHHcCCCcEEEEeCCCC---CHHH----------------HHHHHHHHHHh--cC
Confidence 38999999954432222223345667665 49999999998 4432 23333444443 34
Q ss_pred CCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhc
Q 003363 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSK 749 (826)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (826)
.++|+|+|+||||++|+.++.++|+....++...+..+.......... .+. . ...+. ....... ...
T Consensus 61 ~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~---~~~~~--~~~~~~~--~~~ 127 (202)
T 4fle_A 61 GQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGENQ-NPY-----T---GQKYV--LESRHIY--DLK 127 (202)
T ss_dssp TSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEEE-CTT-----T---CCEEE--ECHHHHH--HHH
T ss_pred CCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhhc-ccc-----c---ccccc--chHHHHH--HHH
Confidence 579999999999999999999999888777766654433211100000 000 0 00000 0111111 122
Q ss_pred CcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 003363 750 SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 750 sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~ 822 (826)
.....+.++++|+|++||++|.+||++++.++++ ++++++++|++|.+... .++++.|.+||+
T Consensus 128 ~~~~~~~~~~~P~LiihG~~D~~Vp~~~s~~l~~-------~~~l~i~~g~~H~~~~~---~~~~~~I~~FL~ 190 (202)
T 4fle_A 128 AMQIEKLESPDLLWLLQQTGDEVLDYRQAVAYYT-------PCRQTVESGGNHAFVGF---DHYFSPIVTFLG 190 (202)
T ss_dssp TTCCSSCSCGGGEEEEEETTCSSSCHHHHHHHTT-------TSEEEEESSCCTTCTTG---GGGHHHHHHHHT
T ss_pred hhhhhhhccCceEEEEEeCCCCCCCHHHHHHHhh-------CCEEEEECCCCcCCCCH---HHHHHHHHHHHh
Confidence 3445567888999999999999999999987763 36899999999987543 256788999986
No 125
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.75 E-value=4.9e-17 Score=169.36 Aligned_cols=229 Identities=16% Similarity=0.171 Sum_probs=137.2
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcc
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~ 650 (826)
.+|..++...+.|+ ..|.||++||.+.. ...|...+..|+++||.|+++|+||.|. +... ....
T Consensus 7 ~~g~~l~y~~~g~~------~~~~vvllHG~~~~--~~~w~~~~~~L~~~g~~vi~~D~~G~G~---S~~~-----~~~~ 70 (276)
T 1zoi_A 7 KDGVQIFYKDWGPR------DAPVIHFHHGWPLS--ADDWDAQLLFFLAHGYRVVAHDRRGHGR---SSQV-----WDGH 70 (276)
T ss_dssp TTSCEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTT---SCCC-----SSCC
T ss_pred CCCcEEEEEecCCC------CCCeEEEECCCCcc--hhHHHHHHHHHHhCCCEEEEecCCCCCC---CCCC-----CCCC
Confidence 35667765555432 23679999997654 5578888899999999999999999544 3211 1122
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhC-CCceeEEEecCCccchhhhccCC--CCCCch------
Q 003363 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTT--DIPDWC------ 721 (826)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~~~~~~~--~~~~~~------ 721 (826)
.++++.+.+..+++. ++.+++.|+||||||.+++.+++++ |++++++|+.++........... ..+...
T Consensus 71 ~~~~~~~d~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (276)
T 1zoi_A 71 DMDHYADDVAAVVAH--LGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQA 148 (276)
T ss_dssp SHHHHHHHHHHHHHH--HTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCCCSCCBCCSSCTTSBCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCCCccccccccccccccHHHHHHHHH
Confidence 344444444444443 2346899999999999999988777 99999999988643210000000 000000
Q ss_pred --------hhhhccC-cC--CccCCCCCChhhHHH-------------------HhhcCcccccCCCCCcEEEEEeCCCC
Q 003363 722 --------YVESYGS-KG--KDSFTESPSVEDLTR-------------------FHSKSPISHISKVKTPTIFLLGAQDL 771 (826)
Q Consensus 722 --------~~~~~~~-~~--~~~~~~~~~~~~~~~-------------------~~~~sp~~~~~~i~~PvLii~G~~D~ 771 (826)
+...+.. .. ..........+.... +...+....+.++++|+|+++|++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~ 228 (276)
T 1zoi_A 149 QVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIGSAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQ 228 (276)
T ss_dssp HHHHCHHHHHHHHHHTTTTTTTSTTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHHHCCSCEEEEEETTCS
T ss_pred HHHHhHHHHHHHhhhccccccccccccccHHHHHHHHhhhhhhhHHHHHHHHHHhcccchhhhccccCCCEEEEEcCCCc
Confidence 0000000 00 000000001111111 11112233466789999999999999
Q ss_pred CCCcHHHHH-HHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 003363 772 RVPVSNGLQ-YARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 772 ~vp~~~~~~-~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~ 822 (826)
.+|+....+ +.+.+. ..++++++++||..... ...++.+.+.+|++
T Consensus 229 ~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 275 (276)
T 1zoi_A 229 IVPYENSGVLSAKLLP----NGALKTYKGYPHGMPTT-HADVINADLLAFIR 275 (276)
T ss_dssp SSCSTTTHHHHHHHST----TEEEEEETTCCTTHHHH-THHHHHHHHHHHHT
T ss_pred ccChHHHHHHHHhhCC----CceEEEcCCCCCchhhh-CHHHHHHHHHHHhc
Confidence 999885443 333333 48999999999987543 44578888999985
No 126
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.75 E-value=5.6e-17 Score=168.65 Aligned_cols=216 Identities=15% Similarity=0.214 Sum_probs=131.6
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (826)
.|.||++||.+.. ...|...+..|+++||.|+++|+||.|. +.. + .....++++.+.+..+++. ++.+
T Consensus 19 g~~vvllHG~~~~--~~~w~~~~~~l~~~g~~vi~~D~~G~G~---S~~---~--~~~~~~~~~~~dl~~~l~~--l~~~ 86 (274)
T 1a8q_A 19 GRPVVFIHGWPLN--GDAWQDQLKAVVDAGYRGIAHDRRGHGH---STP---V--WDGYDFDTFADDLNDLLTD--LDLR 86 (274)
T ss_dssp SSEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTT---SCC---C--SSCCSHHHHHHHHHHHHHH--TTCC
T ss_pred CceEEEECCCcch--HHHHHHHHHHHHhCCCeEEEEcCCCCCC---CCC---C--CCCCcHHHHHHHHHHHHHH--cCCC
Confidence 3679999997654 5578888899999999999999999544 321 1 1123455555555555554 3457
Q ss_pred cEEEEEecchHHHHHHHHHhC-CCceeEEEecCCccchhhhccC-C-CCCCchh--------------hhhccCc--CCc
Q 003363 672 KVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGT-T-DIPDWCY--------------VESYGSK--GKD 732 (826)
Q Consensus 672 rv~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~~~~~~-~-~~~~~~~--------------~~~~~~~--~~~ 732 (826)
++.|+||||||.+++.+++++ |++++++|+.++.......... . ..+...+ ...+... ...
T Consensus 87 ~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (274)
T 1a8q_A 87 DVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVFDALKNGVLTERSQFWKDTAEGFFSAN 166 (274)
T ss_dssp SEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred ceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHHHHHHHHhhccHHHHHHHhcccccccc
Confidence 899999999999999877765 9999999998864311000000 0 0000000 0000000 000
Q ss_pred cCCCCCChhhHH-------------------HHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEE
Q 003363 733 SFTESPSVEDLT-------------------RFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 793 (826)
Q Consensus 733 ~~~~~~~~~~~~-------------------~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 793 (826)
........+... .+...+....+.++++|+|+++|++|..+|++...+....+. ...+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~---~~~~ 243 (274)
T 1a8q_A 167 RPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKFDIPTLVVHGDDDQVVPIDATGRKSAQII---PNAE 243 (274)
T ss_dssp STTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCGGGTHHHHHHHS---TTCE
T ss_pred cccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcCCCCEEEEecCcCCCCCcHHHHHHHHhhC---CCce
Confidence 000000111100 111123334567899999999999999999885544333332 2478
Q ss_pred EEEeCCCCCCCCCC-CCHHHHHHHHHHHHH
Q 003363 794 VIVFPNDVHGIERP-QSDFESFLNIGLWFK 822 (826)
Q Consensus 794 ~~~~p~~~H~~~~~-~~~~~~~~~i~~w~~ 822 (826)
+++++++||.+... +...++.+.+.+||+
T Consensus 244 ~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 244 LKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp EEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred EEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 99999999987754 245578888999985
No 127
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.75 E-value=1.2e-17 Score=176.56 Aligned_cols=241 Identities=13% Similarity=0.090 Sum_probs=150.2
Q ss_pred CeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHH---HHHHHHCCcEEEEECCCCCCCCchhhhhc-CCCCCC
Q 003363 573 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS---LAFLSSVGYSLLIVNYRGSLGFGEEALQS-LPGKVG 648 (826)
Q Consensus 573 g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~---~~~la~~G~~Vl~~d~rG~~g~G~~~~~~-~~~~~~ 648 (826)
+..+..+ +.|. .+++|+||++||++.......|... .+.+++.||.|+++|++++..+....... ..+...
T Consensus 20 ~~~i~v~-~~p~----~~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~~~~~~~~~~g~~~ 94 (304)
T 1sfr_A 20 GRDIKVQ-FQSG----GANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYSDWYQPACGKAGCQ 94 (304)
T ss_dssp TEEEEEE-EECC----STTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTCBCSSCEEETTEEE
T ss_pred CCceEEE-ECCC----CCCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCccccccCCccccccccc
Confidence 4566655 4443 2679999999998533223445442 35677889999999998754432110000 000001
Q ss_pred cchHHHH--HHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhc
Q 003363 649 SQDVNDV--LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 726 (826)
Q Consensus 649 ~~~~~D~--~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 726 (826)
.....+. .+++.++.++..+++++++|+|+||||++++.++.++|++|+++++.+|..++........+. ......
T Consensus 95 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~--~~~~~~ 172 (304)
T 1sfr_A 95 TYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIG--LAMGDA 172 (304)
T ss_dssp CCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTTHHHHHH--HHHHHT
T ss_pred cccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccchhhhhh--Hhhhhc
Confidence 1223332 234445444334777899999999999999999999999999999999987643210000000 000000
Q ss_pred cCcCCccCCCCCChhhHHHHhhcCcccccCCC---CCcEEEEEeCCCC--------------CCCcHHHHHHHHHHHhCC
Q 003363 727 GSKGKDSFTESPSVEDLTRFHSKSPISHISKV---KTPTIFLLGAQDL--------------RVPVSNGLQYARALREKG 789 (826)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i---~~PvLii~G~~D~--------------~vp~~~~~~~~~~l~~~g 789 (826)
+......+.+.+. ...+...+|...+.++ ++|+++++|+.|. .++..++++++++|+++|
T Consensus 173 ~~~~~~~~~g~~~---~~~~~~~~p~~~~~~l~~~~~pi~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~G 249 (304)
T 1sfr_A 173 GGYKASDMWGPKE---DPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGG 249 (304)
T ss_dssp TSCCHHHHHCSTT---STHHHHSCTTTTHHHHHHHTCEEEEECCCSCCBTTBCCSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccchHHhcCCcc---hhhhHhcCHHHHHHHhhhcCCeEEEEecCCCCccccccccccchhHHHHHHHHHHHHHHHHhCC
Confidence 0000000001111 1235556776655554 5899999999998 678899999999999999
Q ss_pred -CCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 790 -VETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 790 -~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
+++++.+|++++|.+. .....+..++.||.++|+
T Consensus 250 ~~~v~~~~~~~g~H~~~---~w~~~l~~~l~~l~~~l~ 284 (304)
T 1sfr_A 250 GHNGVFDFPDSGTHSWE---YWGAQLNAMKPDLQRALG 284 (304)
T ss_dssp CCSEEEECCSCCCSSHH---HHHHHHHHTHHHHHHHHT
T ss_pred CCceEEEecCCCccCHH---HHHHHHHHHHHHHHHhcC
Confidence 9999999987899752 123456678889988764
No 128
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.74 E-value=1.4e-17 Score=171.14 Aligned_cols=218 Identities=16% Similarity=0.083 Sum_probs=139.3
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCc
Q 003363 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 672 (826)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 672 (826)
|+||++||.+.. ...|...+..|+++||.|+++|+||.+...... .....+++..+.+..+++.-.. .++
T Consensus 5 ~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~l~~l~~-~~~ 74 (258)
T 3dqz_A 5 HHFVLVHNAYHG--AWIWYKLKPLLESAGHRVTAVELAASGIDPRPI-------QAVETVDEYSKPLIETLKSLPE-NEE 74 (258)
T ss_dssp CEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTTSTTCSSCG-------GGCCSHHHHHHHHHHHHHTSCT-TCC
T ss_pred CcEEEECCCCCc--cccHHHHHHHHHhCCCEEEEecCCCCcCCCCCC-------CccccHHHhHHHHHHHHHHhcc-cCc
Confidence 889999997755 556888899999999999999999954432211 1123456666655555555322 278
Q ss_pred EEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccC-------CCCCCchhhhhc---cC-----------c-C
Q 003363 673 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-------TDIPDWCYVESY---GS-----------K-G 730 (826)
Q Consensus 673 v~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~-------~~~~~~~~~~~~---~~-----------~-~ 730 (826)
+.|+|||+||.+++.++.++|++++++|+.+|.......... .....|...... +. . .
T Consensus 75 ~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T 3dqz_A 75 VILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKFM 154 (258)
T ss_dssp EEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHHH
T ss_pred eEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHHH
Confidence 999999999999999999999999999999885432110000 000011000000 00 0 0
Q ss_pred CccCCCCCChhhHHHHh--------------hcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEE
Q 003363 731 KDSFTESPSVEDLTRFH--------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 796 (826)
Q Consensus 731 ~~~~~~~~~~~~~~~~~--------------~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 796 (826)
...+......+....+. ...........++|+|+++|++|..+|++....+.+.+.. .++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~ 230 (258)
T 3dqz_A 155 KARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNV----SKVYE 230 (258)
T ss_dssp HHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCC----SCEEE
T ss_pred HHHhhccCCHHHHHHHHHhccCCchhhhhhhccccccccccccCCEEEEECCCCeeeCHHHHHHHHHhCCc----ccEEE
Confidence 00001111111111111 0122222233368999999999999999999888887754 58899
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 797 FPNDVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 797 ~p~~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
+|++||..... ...++.+.|.+|+++|+
T Consensus 231 ~~~~gH~~~~~-~p~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 231 IDGGDHMVMLS-KPQKLFDSLSAIATDYM 258 (258)
T ss_dssp ETTCCSCHHHH-SHHHHHHHHHHHHHHTC
T ss_pred cCCCCCchhhc-ChHHHHHHHHHHHHHhC
Confidence 99999986643 44578899999999875
No 129
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.74 E-value=4.3e-17 Score=171.98 Aligned_cols=231 Identities=13% Similarity=0.145 Sum_probs=140.7
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHH-HHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCc
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKS-LAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~-~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~ 649 (826)
.+|..+++..+.|+ ..|.||++||.+.. ...|... +..|+++||.|+++|+||.|.+... . + ....
T Consensus 8 ~~g~~l~y~~~G~~------~~~~vvllHG~~~~--~~~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~---~-~-~~~~ 74 (298)
T 1q0r_A 8 SGDVELWSDDFGDP------ADPALLLVMGGNLS--ALGWPDEFARRLADGGLHVIRYDHRDTGRSTTR---D-F-AAHP 74 (298)
T ss_dssp ETTEEEEEEEESCT------TSCEEEEECCTTCC--GGGSCHHHHHHHHTTTCEEEEECCTTSTTSCCC---C-T-TTSC
T ss_pred cCCeEEEEEeccCC------CCCeEEEEcCCCCC--ccchHHHHHHHHHhCCCEEEeeCCCCCCCCCCC---C-C-CcCC
Confidence 35667766555332 34689999997654 4567654 4889999999999999995443210 0 0 1112
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCcc-chhhh------------ccCCC
Q 003363 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC-NLALM------------VGTTD 716 (826)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~-~~~~~------------~~~~~ 716 (826)
..++++.+.+..+++. ++.+++.|+||||||.+++.++.++|++++++|+.++.. ..... .....
T Consensus 75 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (298)
T 1q0r_A 75 YGFGELAADAVAVLDG--WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDIDFDANIERVMRGEPTLDGLP 152 (298)
T ss_dssp CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCTTCCHHHHHHHHHHTCCCSSCSC
T ss_pred cCHHHHHHHHHHHHHH--hCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccCCCcccccchhhhhhhhhhhcccc
Confidence 3455555555555554 345789999999999999999999999999999988754 21000 00000
Q ss_pred CCCchhhhhc-c----CcC--------C---ccC--CCC-CChhhHHH-----Hh-----------------hcCcccc-
Q 003363 717 IPDWCYVESY-G----SKG--------K---DSF--TES-PSVEDLTR-----FH-----------------SKSPISH- 754 (826)
Q Consensus 717 ~~~~~~~~~~-~----~~~--------~---~~~--~~~-~~~~~~~~-----~~-----------------~~sp~~~- 754 (826)
.........+ . ... . ..+ ... ...+.... +. ..+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
T 1q0r_A 153 GPQQPFLDALALMNQPAEGRAAEVAKRVSKWRILSGTGVPFDDAEYARWEERAIDHAGGVLAEPYAHYSLTLPPPSRAAE 232 (298)
T ss_dssp CCCHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHHTTTCCSCCCGGGGCCCCCGGGGGG
T ss_pred cccHHHHHHHhccCcccccHHHHHHHHHHhhhhccCCCCCCCHHHHHHHHHHHhhccCCccchhhhhhhhhcCccccccc
Confidence 0000000000 0 000 0 000 000 00010000 00 0011224
Q ss_pred cCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 755 ISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 755 ~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
+.++++|+|+++|++|..+|++.++.+.+.+.. .+++++|++||.. + .++.+.+.+|+.+++
T Consensus 233 l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~----~~~~~i~~~gHe~--p---~~~~~~i~~fl~~~~ 294 (298)
T 1q0r_A 233 LREVTVPTLVIQAEHDPIAPAPHGKHLAGLIPT----ARLAEIPGMGHAL--P---SSVHGPLAEVILAHT 294 (298)
T ss_dssp GGGCCSCEEEEEETTCSSSCTTHHHHHHHTSTT----EEEEEETTCCSSC--C---GGGHHHHHHHHHHHH
T ss_pred ccccCCCEEEEEeCCCccCCHHHHHHHHHhCCC----CEEEEcCCCCCCC--c---HHHHHHHHHHHHHHh
Confidence 678899999999999999999998887776654 7999999999922 2 367888999998764
No 130
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.74 E-value=5.2e-18 Score=192.17 Aligned_cols=242 Identities=12% Similarity=0.098 Sum_probs=160.8
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-----------------cc----hHHHHHHHHCCcEEE
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-----------------SY----SKSLAFLSSVGYSLL 625 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-----------------~~----~~~~~~la~~G~~Vl 625 (826)
.+...||..|.+.+|.|++ .+++|+||+.||.+...... .+ ....+.|+++||+|+
T Consensus 45 ~i~~~DG~~L~a~l~~P~~---~~~~P~vl~~~pyg~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~Gy~vv 121 (560)
T 3iii_A 45 TVEMRDGEKLYINIFRPNK---DGKFPVVMSADTYGKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWVPNDYVVV 121 (560)
T ss_dssp EEECTTSCEEEEEEEECSS---SSCEEEEEEEESSCTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHGGGTCEEE
T ss_pred EEECCCCcEEEEEEEecCC---CCCCCEEEEecCCCCCcccccccccccccccccccccccccccCCCHHHHHhCCCEEE
Confidence 4556688999999999983 57899999999854432110 00 013678999999999
Q ss_pred EECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCc
Q 003363 626 IVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (826)
Q Consensus 626 ~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~ 705 (826)
++|+||+++++..+. .++..+.+|+.++++|+.+++..| .||+++|+|+||++++.+|+..|+.++|+|+.+|+
T Consensus 122 ~~D~RG~G~S~G~~~-----~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~aiv~~~~~ 195 (560)
T 3iii_A 122 KVALRGSDKSKGVLS-----PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKAMIPWEGL 195 (560)
T ss_dssp EEECTTSTTCCSCBC-----TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEEEEEESCC
T ss_pred EEcCCCCCCCCCccc-----cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEEEEecCCc
Confidence 999999887766542 344567999999999999988777 89999999999999999999999999999999999
Q ss_pred cchhh---hccCCCCCC----chh--hhhccC-cCC----ccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCC
Q 003363 706 CNLAL---MVGTTDIPD----WCY--VESYGS-KGK----DSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL 771 (826)
Q Consensus 706 ~~~~~---~~~~~~~~~----~~~--~~~~~~-~~~----~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~ 771 (826)
.|+.. +.+...... |.. ...... ... ..+...+..+ +.|...++ .+++|++|+|+++|..|.
T Consensus 196 ~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d--~~W~~~~~--~~~~I~vPvl~v~Gw~D~ 271 (560)
T 3iii_A 196 NDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFD--DFWKQRQV--PLSQIKTPLLTCASWSTQ 271 (560)
T ss_dssp CBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSC--HHHHTTBC--CGGGCCSCEEEEEEGGGT
T ss_pred ccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcc--hHhhccCC--chhhCCCCEEEeCCcCCC
Confidence 98643 111111111 100 000000 000 0011111111 12333444 678999999999999997
Q ss_pred CCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 772 RVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 772 ~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
.+....+.+.+++++..+ ..+++.+ .+|.... - ..+..+..++||++|||
T Consensus 272 ~~~~~g~l~~y~~l~~~~--k~l~ih~-~~~~~~~-~-~~~~~~~~~~wfD~~Lk 321 (560)
T 3iii_A 272 GLHNRGSFEGFKQAASEE--KWLYVHG-RKEWESY-Y-ARENLERQKSFFDFYLK 321 (560)
T ss_dssp TTTHHHHHHHHHHCCCSS--EEEEEES-SCHHHHH-H-SHHHHHHHHHHHHHHTS
T ss_pred cccchhHHHHHHhccccC--cEEEECC-CCCcCcc-c-ChhHHHHHHHHHHHHhC
Confidence 666677777888776532 3343322 2232100 0 12456788999999996
No 131
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.74 E-value=2.6e-17 Score=172.64 Aligned_cols=230 Identities=14% Similarity=0.105 Sum_probs=143.8
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCc
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~ 649 (826)
-+|..++...+.|+ ..|.||++||.+.. .. .|...+..| +.||.|+++|+||.| .+.. .+.....
T Consensus 10 ~~g~~l~~~~~G~~------~~~~vvllHG~~~~--~~~~w~~~~~~L-~~~~~vi~~Dl~G~G---~S~~--~~~~~~~ 75 (286)
T 2yys_A 10 VGEAELYVEDVGPV------EGPALFVLHGGPGG--NAYVLREGLQDY-LEGFRVVYFDQRGSG---RSLE--LPQDPRL 75 (286)
T ss_dssp CSSCEEEEEEESCT------TSCEEEEECCTTTC--CSHHHHHHHGGG-CTTSEEEEECCTTST---TSCC--CCSCGGG
T ss_pred ECCEEEEEEeecCC------CCCEEEEECCCCCc--chhHHHHHHHHh-cCCCEEEEECCCCCC---CCCC--CccCccc
Confidence 35667766655432 34789999998765 45 677777778 568999999999954 4321 0111012
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh----hc-cC--CCCCC-ch
Q 003363 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----MV-GT--TDIPD-WC 721 (826)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~----~~-~~--~~~~~-~~ 721 (826)
..++++.+.+..+++. ++.+++.|+||||||.+++.++.++|+ ++++|+.+|..+... .. .. ..... ..
T Consensus 76 ~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (286)
T 2yys_A 76 FTVDALVEDTLLLAEA--LGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAPLPDPEE 152 (286)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCCCSCHHH
T ss_pred CcHHHHHHHHHHHHHH--hCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhccccchhHHH
Confidence 3455666555555555 345789999999999999999999999 999999998653221 00 00 00000 00
Q ss_pred -hh------------hh--ccCc-------CC-ccCCCCCChhhHHH--H---hhcCcccccCCCCCcEEEEEeCCCCCC
Q 003363 722 -YV------------ES--YGSK-------GK-DSFTESPSVEDLTR--F---HSKSPISHISKVKTPTIFLLGAQDLRV 773 (826)
Q Consensus 722 -~~------------~~--~~~~-------~~-~~~~~~~~~~~~~~--~---~~~sp~~~~~~i~~PvLii~G~~D~~v 773 (826)
.. .. +... .. ..+........... + ...+....+.++++|+|+++|++|..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~ 232 (286)
T 2yys_A 153 NLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPERRPLYVLVGERDGTS 232 (286)
T ss_dssp HHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCCSSCEEEEEETTCTTT
T ss_pred HHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhcCCCEEEEEeCCCCcC
Confidence 00 00 0000 00 00000000000000 1 111233457789999999999999999
Q ss_pred CcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 774 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 774 p~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
|++ +..+.+ +.. .++++++++||...... ..++.+.|.+|+.+.
T Consensus 233 ~~~-~~~~~~-~~~----~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 276 (286)
T 2yys_A 233 YPY-AEEVAS-RLR----APIRVLPEAGHYLWIDA-PEAFEEAFKEALAAL 276 (286)
T ss_dssp TTT-HHHHHH-HHT----CCEEEETTCCSSHHHHC-HHHHHHHHHHHHHTT
T ss_pred CHh-HHHHHh-CCC----CCEEEeCCCCCCcChhh-HHHHHHHHHHHHHhh
Confidence 999 888888 765 58889999999876444 457889999999763
No 132
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.74 E-value=8.2e-17 Score=180.21 Aligned_cols=232 Identities=16% Similarity=0.172 Sum_probs=144.0
Q ss_pred eccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCC
Q 003363 568 LTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKV 647 (826)
Q Consensus 568 ~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~ 647 (826)
+.+.+|..++.... +..|+||++||++.. ...|...+..|+++||.|+++|+||.+.+... .
T Consensus 8 ~~~~dG~~l~y~~~--------G~gp~VV~lHG~~~~--~~~~~~l~~~La~~Gy~Vi~~D~rG~G~S~~~--------~ 69 (456)
T 3vdx_A 8 QENSTSIDLYYEDH--------GTGVPVVLIHGFPLS--GHSWERQSAALLDAGYRVITYDRRGFGQSSQP--------T 69 (456)
T ss_dssp EETTEEEEEEEEEE--------SSSEEEEEECCTTCC--GGGGTTHHHHHHHHTEEEEEECCTTSTTSCCC--------S
T ss_pred ccccCCeEEEEEEe--------CCCCEEEEECCCCCc--HHHHHHHHHHHHHCCcEEEEECCCCCCCCCCC--------C
Confidence 34556666653322 145899999998765 45677788999999999999999995443211 1
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhC-CCceeEEEecCCccchhhhccCCCCCC---c---
Q 003363 648 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTTDIPD---W--- 720 (826)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~~~~~~~~~~~---~--- 720 (826)
....+++..+.+..+++. ++.++++|+|||+||.+++.+++.+ |++++++|+.+|............... .
T Consensus 70 ~~~s~~~~a~dl~~~l~~--l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~ 147 (456)
T 3vdx_A 70 TGYDYDTFAADLNTVLET--LDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFD 147 (456)
T ss_dssp SCCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSBCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccchHHHHH
Confidence 122344444444444443 3457899999999999998888876 899999999998764211100000000 0
Q ss_pred -----------hhh----hhccCcCCccCCCCCChhhHHHHh------------------hcCcccccCCCCCcEEEEEe
Q 003363 721 -----------CYV----ESYGSKGKDSFTESPSVEDLTRFH------------------SKSPISHISKVKTPTIFLLG 767 (826)
Q Consensus 721 -----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~------------------~~sp~~~~~~i~~PvLii~G 767 (826)
.+. ..+... ..........+....+. ..+....+.++++|+|+++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~PvLiI~G 226 (456)
T 3vdx_A 148 GIVAAVKADRYAFYTGFFNDFYNL-DENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRIDVPALILHG 226 (456)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTT-TTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTCCSCCEEEEE
T ss_pred HHHHhhhccchHHHHHHHHHHhcc-cccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhCCCCEEEEEe
Confidence 000 000000 00000000111111100 11334556788999999999
Q ss_pred CCCCCCCcH-HHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 768 AQDLRVPVS-NGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 768 ~~D~~vp~~-~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
++|..+|++ ....+.+.+. ++++++++++||.+.. +...++...+.+||++++
T Consensus 227 ~~D~~vp~~~~~~~l~~~~~----~~~~~~i~gagH~~~~-e~p~~v~~~I~~FL~~~l 280 (456)
T 3vdx_A 227 TGDRTLPIENTARVFHKALP----SAEYVEVEGAPHGLLW-THAEEVNTALLAFLAKAL 280 (456)
T ss_dssp TTCSSSCGGGTHHHHHHHCT----TSEEEEETTCCSCTTT-TTHHHHHHHHHHHHHHHH
T ss_pred CCCCCcCHHHHHHHHHHHCC----CceEEEeCCCCCcchh-hCHHHHHHHHHHHHHHhh
Confidence 999999998 4444444443 4799999999998765 455688999999999875
No 133
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.74 E-value=8.7e-18 Score=193.17 Aligned_cols=244 Identities=14% Similarity=0.111 Sum_probs=164.5
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-ccchHHH-HHHHHCCcEEEEECCCCCCCCchhhhhcCC
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-SSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLP 644 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-~~~~~~~-~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~ 644 (826)
.+...||..|.+.+|.|++ .+++|+||+.||.+..... ..|...+ +.|+++||+|+++|+||+++++..+..
T Consensus 13 ~i~~~DG~~L~~~~~~P~~---~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~~~--- 86 (587)
T 3i2k_A 13 MVPMRDGVRLAVDLYRPDA---DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEFVP--- 86 (587)
T ss_dssp EEECTTSCEEEEEEEEECC---SSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCCCT---
T ss_pred EEECCCCCEEEEEEEECCC---CCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcccc---
Confidence 3445578899999999973 5688999999985433210 0122123 889999999999999998877654321
Q ss_pred CCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCc-cchhhhc-cCCCCC----
Q 003363 645 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL-CNLALMV-GTTDIP---- 718 (826)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~-~~~~~~~-~~~~~~---- 718 (826)
...+.+|+.++++|+.+++..+ .+|+++|+||||++++.+++++|+.++++|+.++. .++.... ......
T Consensus 87 ---~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~~~~~~gG~~~~~~ 162 (587)
T 3i2k_A 87 ---HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPGGALSVEA 162 (587)
T ss_dssp ---TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCCCCSCTTCCCCHHH
T ss_pred ---ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCcccccccceeecCCccccch
Confidence 2357899999999999887655 79999999999999999999999999999999998 6653211 000000
Q ss_pred --Cchhhhh------------------------------c-cCcCC-------------ccC-CCCCChhhHHHHhhcCc
Q 003363 719 --DWCYVES------------------------------Y-GSKGK-------------DSF-TESPSVEDLTRFHSKSP 751 (826)
Q Consensus 719 --~~~~~~~------------------------------~-~~~~~-------------~~~-~~~~~~~~~~~~~~~sp 751 (826)
.|..... + ..... ..+ ...+. ....|...++
T Consensus 163 ~~~w~~~~~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~yw~~~s~ 240 (587)
T 3i2k_A 163 LLGWSALIGTGLITSRSDARPEDAADFVQLAAILNDVAGAASVTPLAEQPLLGRLIPWVIDQVVDHPD--NDESWQSISL 240 (587)
T ss_dssp HHHHHHHHHHHHHHHSSSCCTTHHHHHHHHHHHHTCHHHHHTCSSTTCCHHHHHHCTHHHHTTTTCCS--CCHHHHTTCC
T ss_pred HHHHHHHhhhhcccccccCCccchhhhhhhhhhhhHHHHHHhcCCcccchhccccchhHHhhhhcCCC--CChHHhcCCh
Confidence 1211000 0 00000 000 11111 1233556777
Q ss_pred ccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCC---------CCCHH---HHHHHHHH
Q 003363 752 ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER---------PQSDF---ESFLNIGL 819 (826)
Q Consensus 752 ~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~---------~~~~~---~~~~~i~~ 819 (826)
...+++|++|+|+++|..|..+ ..+.+++++|+..+. .++++-|.. |.... +.... +..+.+++
T Consensus 241 ~~~l~~I~vPvL~v~Gw~D~~~--~~~~~~~~~l~~~~~-~~L~iGPw~-H~~~~~~~g~~~~g~~~~~~~~~~~~~~~~ 316 (587)
T 3i2k_A 241 FERLGGLATPALITAGWYDGFV--GESLRTFVAVKDNAD-ARLVVGPWS-HSNLTGRNADRKFGIAATYPIQEATTMHKA 316 (587)
T ss_dssp HHHHTTCCCCEEEEEEEECTTH--HHHHHHHHHHTTTSC-EEEEEEEEE-TTBCSSEETTEECCGGGSCCHHHHHHHHHH
T ss_pred hhhhccCCCCEEEEccCCCccc--hHHHHHHHHHhhcCC-CEEEECCcc-ccCccccCCCcccCCccccccchhhHHHHH
Confidence 7889999999999999999875 567889999987664 366666653 65311 11111 33488999
Q ss_pred HHHHHcC
Q 003363 820 WFKKYCK 826 (826)
Q Consensus 820 w~~~~l~ 826 (826)
||++|||
T Consensus 317 wFD~~Lk 323 (587)
T 3i2k_A 317 FFDRHLR 323 (587)
T ss_dssp HHHHHHS
T ss_pred HHHHHhc
Confidence 9999996
No 134
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.74 E-value=2.8e-17 Score=173.53 Aligned_cols=227 Identities=14% Similarity=0.150 Sum_probs=144.5
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..++..... +.|+||++||.+.. ...|...+..|.++||.|+++|+||.+. +.. ......
T Consensus 17 ~g~~l~~~~~g--------~~~~vv~~HG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~---S~~-----~~~~~~ 78 (309)
T 3u1t_A 17 EGATIAYVDEG--------SGQPVLFLHGNPTS--SYLWRNIIPYVVAAGYRAVAPDLIGMGD---SAK-----PDIEYR 78 (309)
T ss_dssp TTEEEEEEEEE--------CSSEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTTSTT---SCC-----CSSCCC
T ss_pred CCeEEEEEEcC--------CCCEEEEECCCcch--hhhHHHHHHHHHhCCCEEEEEccCCCCC---CCC-----CCcccC
Confidence 56666544432 24789999997655 4567777888788899999999999543 321 111334
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhcc--------------CCCC
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG--------------TTDI 717 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~--------------~~~~ 717 (826)
++++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|......... ....
T Consensus 79 ~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (309)
T 3u1t_A 79 LQDHVAYMDGFIDA--LGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDLRT 156 (309)
T ss_dssp HHHHHHHHHHHHHH--HTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHH--cCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHHhc
Confidence 66666666666655 2447899999999999999999999999999999887543210000 0000
Q ss_pred C---------CchhhhhccCcCCccCCCCCChhhHHHHhh-----------------c--------------CcccccCC
Q 003363 718 P---------DWCYVESYGSKGKDSFTESPSVEDLTRFHS-----------------K--------------SPISHISK 757 (826)
Q Consensus 718 ~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~--------------sp~~~~~~ 757 (826)
+ ...+...+.... ........+....+.. . +....+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 234 (309)
T 3u1t_A 157 ADVGEKMVLDGNFFVETILPEM--GVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMA 234 (309)
T ss_dssp TTHHHHHHTTTCHHHHTHHHHT--SCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHH
T ss_pred cchhhhhccccceehhhhcccc--cccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhccc
Confidence 0 000000000000 0000001111111110 0 11123567
Q ss_pred CCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 758 VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 758 i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
+++|+|+++|++|..+|++.+..+.+.+.. .++++++++||..... ...++...|.+||+++.
T Consensus 235 i~~P~l~i~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~~-~p~~~~~~i~~fl~~~~ 297 (309)
T 3u1t_A 235 SPIPKLLFHAEPGALAPKPVVDYLSENVPN----LEVRFVGAGTHFLQED-HPHLIGQGIADWLRRNK 297 (309)
T ss_dssp CCSCEEEEEEEECSSSCHHHHHHHHHHSTT----EEEEEEEEESSCHHHH-CHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEecCCCCCCCHHHHHHHHhhCCC----CEEEEecCCcccchhh-CHHHHHHHHHHHHHhcc
Confidence 899999999999999999998888887754 6778889999976543 44578889999998864
No 135
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.74 E-value=1.7e-17 Score=172.02 Aligned_cols=227 Identities=15% Similarity=0.233 Sum_probs=142.4
Q ss_pred ccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCC
Q 003363 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (826)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~ 648 (826)
...+|..+++....+ +..|+||++||.+.. ...|...+..|++ +|.|+++|+||. |.+... ..
T Consensus 10 ~~~~g~~l~y~~~G~------~~~p~lvl~hG~~~~--~~~w~~~~~~L~~-~~~vi~~D~rG~---G~S~~~-----~~ 72 (266)
T 3om8_A 10 ATSDGASLAYRLDGA------AEKPLLALSNSIGTT--LHMWDAQLPALTR-HFRVLRYDARGH---GASSVP-----PG 72 (266)
T ss_dssp ECTTSCEEEEEEESC------TTSCEEEEECCTTCC--GGGGGGGHHHHHT-TCEEEEECCTTS---TTSCCC-----CS
T ss_pred eccCCcEEEEEecCC------CCCCEEEEeCCCccC--HHHHHHHHHHhhc-CcEEEEEcCCCC---CCCCCC-----CC
Confidence 344677777665532 235889999996654 4578878888875 799999999994 444211 11
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh----------hccCCCCC
Q 003363 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----------MVGTTDIP 718 (826)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~----------~~~~~~~~ 718 (826)
...++++.+.+..+++. +..+++.|+||||||.+++.++.++|++++++|+.++...... ........
T Consensus 73 ~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (266)
T 3om8_A 73 PYTLARLGEDVLELLDA--LEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQAEDMS 150 (266)
T ss_dssp CCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHCSSSH
T ss_pred CCCHHHHHHHHHHHHHH--hCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHccccHH
Confidence 23455555555555554 3457899999999999999999999999999999876432100 00000000
Q ss_pred Cch--hhhhccCcCCccCCCCCC-hhh----------------HHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHH
Q 003363 719 DWC--YVESYGSKGKDSFTESPS-VED----------------LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGL 779 (826)
Q Consensus 719 ~~~--~~~~~~~~~~~~~~~~~~-~~~----------------~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~ 779 (826)
... ....+... ......+. .+. ...+...+....+.++++|+|+++|++|..+|++.++
T Consensus 151 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i~~P~Lvi~G~~D~~~~~~~~~ 228 (266)
T 3om8_A 151 ETAAGFLGNWFPP--ALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGE 228 (266)
T ss_dssp HHHHHHHHHHSCH--HHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGCCSCEEEEEETTCSSSCHHHHH
T ss_pred HHHHHHHHHhcCh--hhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCCCCCEEEEEeCCCCCCCHHHHH
Confidence 000 00000000 00000000 000 0011122223457789999999999999999999999
Q ss_pred HHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 003363 780 QYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 780 ~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~ 822 (826)
.+.+.+.. .++++++ +||....+. ..++...+.+||.
T Consensus 229 ~l~~~ip~----a~~~~i~-~gH~~~~e~-p~~~~~~i~~Fl~ 265 (266)
T 3om8_A 229 LIAASIAG----ARLVTLP-AVHLSNVEF-PQAFEGAVLSFLG 265 (266)
T ss_dssp HHHHHSTT----CEEEEES-CCSCHHHHC-HHHHHHHHHHHHT
T ss_pred HHHHhCCC----CEEEEeC-CCCCccccC-HHHHHHHHHHHhc
Confidence 88888765 6888897 799765433 4477888888875
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.74 E-value=3.3e-16 Score=186.37 Aligned_cols=263 Identities=10% Similarity=0.079 Sum_probs=174.6
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
.+..++|||| ++++|..+. .++..+ .+++..+++...... ..++|||||++|||+.
T Consensus 83 ~v~~~~~spd-~~~~~~~~~-----~i~~~d~~~~~~~~l~~~~~~~----------~~~~~SpdG~~la~~~------- 139 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFTQG-----GLVGFDMLARKVTYLFDTNEET----------ASLDFSPVGDRVAYVR------- 139 (706)
T ss_dssp CCEEEEETTT-TEEEEEETT-----EEEEEETTTTEEEEEECCTTCC----------TTCEECTTSSEEEEEE-------
T ss_pred CceeEEECCC-CeEEEEECC-----EEEEEECCCCceEEccCCcccc----------cCCcCCCCCCEEEEEE-------
Confidence 4788999999 888887652 355444 455555555433333 7899999999999962
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccC-----CceEeccCCCCCCc------------
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS-----GEVQAVKGIPKSLS------------ 296 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~-----g~~~~l~~~~~~~~------------ 296 (826)
...|++||+.+ ++.++++ .....
T Consensus 140 --------------------------------------~~~i~v~~~~~~~~~~g~~~~~~--~~~~~~~~~g~~~~~ee 179 (706)
T 2z3z_A 140 --------------------------------------NHNLYIARGGKLGEGMSRAIAVT--IDGTETLVYGQAVHQRE 179 (706)
T ss_dssp --------------------------------------TTEEEEEECBCTTSCCCCCEESC--SCCBTTEEESSCCGGGC
T ss_pred --------------------------------------CCeEEEEecCcccccCCCcEEec--cCCCCCeEcccchhhhh
Confidence 25799999999 8888873 32222
Q ss_pred ---cceEEEeeCCCCCccEEEEEeecCcc--------------eeeeeeee----ccCCCceEEEEcccccchhhhhhhh
Q 003363 297 ---VGQVVWAPLNEGLHQYLVFVGWSSET--------------RKLGIKYC----YNRPCALYAVRVSLYKSEASELELK 355 (826)
Q Consensus 297 ---~~~~~wSPDg~~~~~~lvf~~~~~~~--------------~~~g~~~~----~~~~~~l~~~d~~~~~~~~~~~~~~ 355 (826)
+..+.|||||+. |+|.+..... ......|. .+....|+++|+
T Consensus 180 ~~~~~~~~~SpDg~~----la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~------------- 242 (706)
T 2z3z_A 180 FGIEKGTFWSPKGSC----LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHL------------- 242 (706)
T ss_dssp TTCCCSEEECTTSSE----EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEET-------------
T ss_pred cCCCceEEECCCCCE----EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEEC-------------
Confidence 468999999999 9998732210 00000000 123357999998
Q ss_pred cCCCCCCcceecCC---CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCC-CCCcccceeeeeeeee
Q 003363 356 ESSSEDLPVVNLTE---SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG-NFSSLEKIVDVIPVVQ 431 (826)
Q Consensus 356 ~~~~~~~~~~~Lt~---~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~ 431 (826)
++++.+.++. ....+..+.|||||++|++.+.+.. .....|+++|+.++. .+.+....
T Consensus 243 ----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~------~~~~~v~~~d~~~g~~~~~~~~~~-------- 304 (706)
T 2z3z_A 243 ----ATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRA------QNECKVNAYDAETGRFVRTLFVET-------- 304 (706)
T ss_dssp ----TTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTT------SCEEEEEEEETTTCCEEEEEEEEE--------
T ss_pred ----CCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCC------CCeeEEEEEECCCCceeeEEEEcc--------
Confidence 6777666653 2345678999999999999876531 234689999998863 22111100
Q ss_pred ccCCCCCcccccCCCCCCcccc--CCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeee-EEEeecCCEEEEEEeC
Q 003363 432 CAEGDCFPGLYSSSILSNPWLS--DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSW-SLLTLDGDNIIAVSSS 508 (826)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~--Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~-~~~s~dg~~l~~~~s~ 508 (826)
... |......+.|+| ||+ +++.+..++..+||.+|..++..+.|+.....+.. ..|+++++.|++....
T Consensus 305 --~~~-----~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 305 --DKH-----YVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp --CSS-----CCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred --CCC-----eECccCCceeecCCCCE-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 000 111124678999 998 55666666788999999888888888876654543 5899999998888765
Q ss_pred CCC-CCeEEEEeeccc
Q 003363 509 PVD-VPQVKYGYFVDK 523 (826)
Q Consensus 509 ~~~-p~~l~~~~~~~~ 523 (826)
... -..||..++.++
T Consensus 377 ~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 377 ASPLERHFYCIDIKGG 392 (706)
T ss_dssp SCTTCBEEEEEETTCC
T ss_pred CCCceEEEEEEEcCCC
Confidence 321 246777776543
No 137
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.73 E-value=9.3e-17 Score=165.03 Aligned_cols=210 Identities=16% Similarity=0.208 Sum_probs=130.4
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchH-HHHHHHHHHHHHcCCCCCC
Q 003363 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDV-NDVLTAIDHVIDMGLANPS 671 (826)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~-~D~~~~i~~l~~~~~~d~~ 671 (826)
|.||++||.+.. ....|...+..|+++||.|+++|+||.+.+... ...+..... +++.++++++.+. +.+
T Consensus 24 ~~vvllHG~~~~-~~~~~~~~~~~l~~~g~~vi~~D~~G~G~S~~~-----~~~~~~~~~~~~~~~~~~~l~~l---~~~ 94 (254)
T 2ocg_A 24 HAVLLLPGMLGS-GETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPP-----DRDFPADFFERDAKDAVDLMKAL---KFK 94 (254)
T ss_dssp EEEEEECCTTCC-HHHHCHHHHHHSCTTTEEEEEECCTTSTTCCSS-----CCCCCTTHHHHHHHHHHHHHHHT---TCS
T ss_pred CeEEEECCCCCC-CccchHHHHHHHhhCCCeEEEECCCCCCCCCCC-----CCCCChHHHHHHHHHHHHHHHHh---CCC
Confidence 679999996543 123577788888899999999999995443211 111111112 3344444444333 347
Q ss_pred cEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh-----hccCCCCCCchhh------hhccCcCCccCCCCCCh
Q 003363 672 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-----MVGTTDIPDWCYV------ESYGSKGKDSFTESPSV 740 (826)
Q Consensus 672 rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~-----~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 740 (826)
++.|+|||+||.+++.+|.++|++++++|+.+|...... +....+...|... ..++... +. ..+
T Consensus 95 ~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~ 169 (254)
T 2ocg_A 95 KVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDY---FA--RTC 169 (254)
T ss_dssp SEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHHHHHHHHHHHCHHH---HH--HHH
T ss_pred CEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHHhHHHHHHHhcchh---hH--HHH
Confidence 899999999999999999999999999999887532110 0000111111000 0000000 00 000
Q ss_pred hh----HHHHhh----cCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHH
Q 003363 741 ED----LTRFHS----KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFE 812 (826)
Q Consensus 741 ~~----~~~~~~----~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~ 812 (826)
.. ...+.. ......+.++++|+|+++|++|..+|++.+..+.+.++. .+++++|++||..... ...+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~e-~p~~ 244 (254)
T 2ocg_A 170 EKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKG----SRLHLMPEGKHNLHLR-FADE 244 (254)
T ss_dssp HHHHHHHHGGGGSGGGBSSGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSTT----CEEEEETTCCTTHHHH-THHH
T ss_pred HHHHHHHHHHHhccCCchhhhhhhcccCCEEEEecCCCccCCHHHHHHHHHhCCC----CEEEEcCCCCCchhhh-CHHH
Confidence 00 000000 012345678999999999999999999998888877754 6899999999987643 3446
Q ss_pred HHHHHHHHH
Q 003363 813 SFLNIGLWF 821 (826)
Q Consensus 813 ~~~~i~~w~ 821 (826)
+.+.+.+||
T Consensus 245 ~~~~i~~fl 253 (254)
T 2ocg_A 245 FNKLAEDFL 253 (254)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777888887
No 138
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.73 E-value=9.5e-17 Score=163.26 Aligned_cols=203 Identities=13% Similarity=0.118 Sum_probs=133.1
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHH--CCcEEEEECCCCCCC------CchhhhhcCCCC-
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS--VGYSLLIVNYRGSLG------FGEEALQSLPGK- 646 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~--~G~~Vl~~d~rG~~g------~G~~~~~~~~~~- 646 (826)
+...++.|+ ....++||++||.+.. ...+......|.. .++.++.|+-+.... .+..|.......
T Consensus 25 l~y~ii~P~----~~~~~~VI~LHG~G~~--~~dl~~l~~~l~~~~~~~~~i~P~Ap~~~~~~~~~~~~~~Wf~~~~~~~ 98 (246)
T 4f21_A 25 MNYELMEPA----KQARFCVIWLHGLGAD--GHDFVDIVNYFDVSLDEIRFIFPHADIIPVTINMGMQMRAWYDIKSLDA 98 (246)
T ss_dssp CCEEEECCS----SCCCEEEEEEEC--CC--CCCGGGGGGGCCSCCTTEEEEEECGGGSCTTTHHHHHHHSCTTCCCC--
T ss_pred cCceEeCCC----CcCCeEEEEEcCCCCC--HHHHHHHHHHhhhcCCCeEEEeCCCCccccccCCCCCcccccccccccc
Confidence 555678785 3456799999995543 2344444444432 367888887432110 011121110000
Q ss_pred ------CCcchHHHHHHHHHHHHH---cCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCC
Q 003363 647 ------VGSQDVNDVLTAIDHVID---MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI 717 (826)
Q Consensus 647 ------~~~~~~~D~~~~i~~l~~---~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~ 717 (826)
.-...+....+.++.+++ ...+|++||+|+|+|+||.+++.++.++|+.+++++..++.......
T Consensus 99 ~~~~~~~d~~~i~~~~~~i~~li~~~~~~gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~i~~sG~lp~~~~------ 172 (246)
T 4f21_A 99 NSLNRVVDVEGINSSIAKVNKLIDSQVNQGIASENIILAGFSQGGIIATYTAITSQRKLGGIMALSTYLPAWDN------ 172 (246)
T ss_dssp -CGGGGSCCC-CHHHHHHHHHHHHHHHHC-CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEEEEESCCCTTHHH------
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHHHcCCChhcEEEEEeCchHHHHHHHHHhCccccccceehhhccCcccc------
Confidence 000112333333333332 23489999999999999999999999999999999998875421110
Q ss_pred CCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEe
Q 003363 718 PDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVF 797 (826)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~ 797 (826)
+.. ... ....++|+|++||+.|++||++.++++++.|++.|.++++..|
T Consensus 173 --------~~~-------------------~~~----~~~~~~Pvl~~HG~~D~vVp~~~~~~~~~~L~~~g~~v~~~~y 221 (246)
T 4f21_A 173 --------FKG-------------------KIT----SINKGLPILVCHGTDDQVLPEVLGHDLSDKLKVSGFANEYKHY 221 (246)
T ss_dssp --------HST-------------------TCC----GGGTTCCEEEEEETTCSSSCHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred --------ccc-------------------ccc----ccccCCchhhcccCCCCccCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 000 000 0113589999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 798 PNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 798 p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
|+.||.+. .+.+..+.+||++.|+
T Consensus 222 ~g~gH~i~-----~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 222 VGMQHSVC-----MEEIKDISNFIAKTFK 245 (246)
T ss_dssp SSCCSSCC-----HHHHHHHHHHHHHHTT
T ss_pred CCCCCccC-----HHHHHHHHHHHHHHhC
Confidence 99999875 3567889999999886
No 139
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.73 E-value=3.7e-17 Score=175.25 Aligned_cols=236 Identities=17% Similarity=0.240 Sum_probs=138.4
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHH-CCcEEEEECCCCCCCCchhhhhcCCCCCCcc
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~ 650 (826)
+|..+++....|.+ .+.+.+.||++||++.. ...|...+..|++ .||.|+++|+||.|.+.... +......
T Consensus 36 ~g~~l~y~~~G~~~--~~~~g~plvllHG~~~~--~~~w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~----~~~~~~~ 107 (330)
T 3nwo_A 36 GDHETWVQVTTPEN--AQPHALPLIVLHGGPGM--AHNYVANIAALADETGRTVIHYDQVGCGNSTHLP----DAPADFW 107 (330)
T ss_dssp TTEEEEEEEECCSS--CCTTCCCEEEECCTTTC--CSGGGGGGGGHHHHHTCCEEEECCTTSTTSCCCT----TSCGGGC
T ss_pred cCcEEEEEEecCcc--CCCCCCcEEEECCCCCC--chhHHHHHHHhccccCcEEEEECCCCCCCCCCCC----CCccccc
Confidence 56778777766531 11112358889997765 3456666666765 69999999999954432100 0111112
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc------------------
Q 003363 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV------------------ 712 (826)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~------------------ 712 (826)
..+++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++........
T Consensus 108 ~~~~~a~dl~~ll~~--lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (330)
T 3nwo_A 108 TPQLFVDEFHAVCTA--LGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASMRLWSEAAGDLRAQLPAETRAAL 185 (330)
T ss_dssp CHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCSBHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHH--cCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCcchHHHHHHHHHHHHhcCHHHHHHH
Confidence 344444444444443 234689999999999999999999999999999887754321100
Q ss_pred ------cCCCCCCchh-hhhccCcCCccCCCCCChhhHHH----------H---------------hhcCcccccCCCCC
Q 003363 713 ------GTTDIPDWCY-VESYGSKGKDSFTESPSVEDLTR----------F---------------HSKSPISHISKVKT 760 (826)
Q Consensus 713 ------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~---------------~~~sp~~~~~~i~~ 760 (826)
.....+.+.. ...+...........+ ...... + ...+....+.+|++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 264 (330)
T 3nwo_A 186 DRHEAAGTITHPDYLQAAAEFYRRHVCRVVPTP-QDFADSVAQMEAEPTVYHTMNGPNEFHVVGTLGDWSVIDRLPDVTA 264 (330)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHTCCSSSCC-HHHHHHHHHHHHSCHHHHHHTCSCSSSCCSGGGGCBCGGGGGGCCS
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHhhccccCCC-HHHHHHHHhhccchhhhhcccCchhhhhhccccCCchhhhcccCCC
Confidence 0000000000 0000000000000001 000000 0 01122345677899
Q ss_pred cEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 761 PTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 761 PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
|+|+++|++|..+| ..+.++.+.+. ..+++++|++||....++ ..++.+.+.+||+++
T Consensus 265 P~Lvi~G~~D~~~p-~~~~~~~~~ip----~~~~~~i~~~gH~~~~e~-p~~~~~~i~~FL~~~ 322 (330)
T 3nwo_A 265 PVLVIAGEHDEATP-KTWQPFVDHIP----DVRSHVFPGTSHCTHLEK-PEEFRAVVAQFLHQH 322 (330)
T ss_dssp CEEEEEETTCSSCH-HHHHHHHHHCS----SEEEEEETTCCTTHHHHS-HHHHHHHHHHHHHHH
T ss_pred CeEEEeeCCCccCh-HHHHHHHHhCC----CCcEEEeCCCCCchhhcC-HHHHHHHHHHHHHhc
Confidence 99999999999875 45566665554 489999999999876544 457889999999875
No 140
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.73 E-value=2.2e-17 Score=173.10 Aligned_cols=217 Identities=17% Similarity=0.220 Sum_probs=135.2
Q ss_pred CcEEEEEcCCC-CCCCCccchHHH-HHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC
Q 003363 592 DPLIVVLHGGP-HSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (826)
Q Consensus 592 ~P~vv~~HGg~-~~~~~~~~~~~~-~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (826)
.|.||++||.+ +......|...+ ..|++. |.|+++|+||. |.+.. +.. ....++++.+.+..+++. ++
T Consensus 33 g~~vvllHG~~~~~~~~~~w~~~~~~~L~~~-~~vi~~D~~G~---G~S~~---~~~-~~~~~~~~a~dl~~~l~~--l~ 102 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNYYRNVGPFVDAG-YRVILKDSPGF---NKSDA---VVM-DEQRGLVNARAVKGLMDA--LD 102 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHHTT-CEEEEECCTTS---TTSCC---CCC-SSCHHHHHHHHHHHHHHH--TT
T ss_pred CCcEEEECCCCCCCCcHHHHHHHHHHHHhcc-CEEEEECCCCC---CCCCC---CCC-cCcCHHHHHHHHHHHHHH--hC
Confidence 36899999964 222234566667 778765 99999999994 44421 111 123566666666666665 34
Q ss_pred CCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCC------------CCCchhhhhccCc---CCccC
Q 003363 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD------------IPDWCYVESYGSK---GKDSF 734 (826)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~------------~~~~~~~~~~~~~---~~~~~ 734 (826)
.+++.|+||||||.+++.+|.++|++++++|+.+|............ .+.+.....+... .....
T Consensus 103 ~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (286)
T 2puj_A 103 IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLI 182 (286)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGC
T ss_pred CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccC
Confidence 57899999999999999999999999999999987542100000000 0000000000000 00000
Q ss_pred CC----------CCChhhHHHHh---------hcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEE
Q 003363 735 TE----------SPSVEDLTRFH---------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVI 795 (826)
Q Consensus 735 ~~----------~~~~~~~~~~~---------~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~ 795 (826)
.. ....+....+. ..+....+.++++|+|+++|++|..+|+..++++.+.++. .+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~p~~~~~~~~~~~~~----~~~~ 258 (286)
T 2puj_A 183 TEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDD----ARLH 258 (286)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSSS----EEEE
T ss_pred CHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhcCCCEEEEEECCCCccCHHHHHHHHHHCCC----CeEE
Confidence 00 00000001110 1122345678899999999999999999999888877753 7999
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 796 VFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 796 ~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
+++++||...... ..++...+.+||++
T Consensus 259 ~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 285 (286)
T 2puj_A 259 VFSKCGAWAQWEH-ADEFNRLVIDFLRH 285 (286)
T ss_dssp EESSCCSCHHHHT-HHHHHHHHHHHHHH
T ss_pred EeCCCCCCccccC-HHHHHHHHHHHHhc
Confidence 9999999865433 45788889999875
No 141
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.73 E-value=5.4e-18 Score=176.32 Aligned_cols=219 Identities=11% Similarity=0.097 Sum_probs=140.9
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCc
Q 003363 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 672 (826)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 672 (826)
|+||++||.+.. ...|...+..|++ ||.|+++|+||.+...... . .......+++..+.+..+++. ++.++
T Consensus 29 ~~vv~lHG~~~~--~~~~~~~~~~l~~-g~~v~~~d~~G~G~s~~~~---~-~~~~~~~~~~~~~~~~~~~~~--~~~~~ 99 (282)
T 3qvm_A 29 KTVLLAHGFGCD--QNMWRFMLPELEK-QFTVIVFDYVGSGQSDLES---F-STKRYSSLEGYAKDVEEILVA--LDLVN 99 (282)
T ss_dssp CEEEEECCTTCC--GGGGTTTHHHHHT-TSEEEECCCTTSTTSCGGG---C-CTTGGGSHHHHHHHHHHHHHH--TTCCS
T ss_pred CeEEEECCCCCC--cchHHHHHHHHhc-CceEEEEecCCCCCCCCCC---C-CccccccHHHHHHHHHHHHHH--cCCCc
Confidence 899999997655 4567777888877 9999999999955443221 1 011122466666666666665 34578
Q ss_pred EEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccC----CCCCCch-hhhhccCc-------CCc-cCCCCCC
Q 003363 673 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT----TDIPDWC-YVESYGSK-------GKD-SFTESPS 739 (826)
Q Consensus 673 v~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~----~~~~~~~-~~~~~~~~-------~~~-~~~~~~~ 739 (826)
+.|+|||+||.+++.++.++|++++++|+.+|.......... ....... ........ ... .+.....
T Consensus 100 ~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (282)
T 3qvm_A 100 VSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHS 179 (282)
T ss_dssp EEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTSC
T ss_pred eEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCccc
Confidence 999999999999999999999999999999986542211000 0000000 00000000 000 0000000
Q ss_pred hhh-------------------HHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 003363 740 VED-------------------LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 800 (826)
Q Consensus 740 ~~~-------------------~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~ 800 (826)
... .......+....+.++++|+|+++|++|..+|++.+..+.+.+.+ .++++++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~ 255 (282)
T 3qvm_A 180 SELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPN----SQLELIQAE 255 (282)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGCCSCEEEEEEEECTTCCHHHHHHHHHHSSS----EEEEEEEEE
T ss_pred hhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcCCCCeEEEEeCCCCcCCHHHHHHHHHhCCC----CcEEEecCC
Confidence 000 011112233456788899999999999999999999888887754 799999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 801 VHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 801 ~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
+|.+.... ..++.+.|.+||+++.
T Consensus 256 gH~~~~~~-~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 256 GHCLHMTD-AGLITPLLIHFIQNNQ 279 (282)
T ss_dssp SSCHHHHC-HHHHHHHHHHHHHHC-
T ss_pred CCcccccC-HHHHHHHHHHHHHhcC
Confidence 99875433 5578899999998753
No 142
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.73 E-value=5.6e-18 Score=174.94 Aligned_cols=221 Identities=12% Similarity=0.048 Sum_probs=139.0
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
..|+||++||.+.. ...|...+..|++ ||.|+++|+||.+..... .. .......++++.+.+..+++. ++.
T Consensus 19 ~~p~vv~~HG~~~~--~~~~~~~~~~l~~-g~~v~~~D~~G~G~S~~~---~~-~~~~~~~~~~~~~~~~~~~~~--~~~ 89 (269)
T 4dnp_A 19 GERVLVLAHGFGTD--QSAWNRILPFFLR-DYRVVLYDLVCAGSVNPD---FF-DFRRYTTLDPYVDDLLHILDA--LGI 89 (269)
T ss_dssp CSSEEEEECCTTCC--GGGGTTTGGGGTT-TCEEEEECCTTSTTSCGG---GC-CTTTCSSSHHHHHHHHHHHHH--TTC
T ss_pred CCCEEEEEeCCCCc--HHHHHHHHHHHhC-CcEEEEEcCCCCCCCCCC---CC-CccccCcHHHHHHHHHHHHHh--cCC
Confidence 45899999997654 4567677777877 999999999995443221 11 111122455655555555555 345
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCC-C--Cch-hhhhccCc-------CCccCCCCCC
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI-P--DWC-YVESYGSK-------GKDSFTESPS 739 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~-~--~~~-~~~~~~~~-------~~~~~~~~~~ 739 (826)
+++.|+|||+||.+++.++.++|++++++|+.+|............. . ... ........ ..........
T Consensus 90 ~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (269)
T 4dnp_A 90 DCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGADV 169 (269)
T ss_dssp CSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSSC
T ss_pred CeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCCC
Confidence 78999999999999999999999999999999986432110000000 0 000 00000000 0000000000
Q ss_pred hh-------------------hHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 003363 740 VE-------------------DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 800 (826)
Q Consensus 740 ~~-------------------~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~ 800 (826)
.+ ....+...+....+.++++|+|+++|++|..+|++.+..+.+.+... +++++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 246 (269)
T 4dnp_A 170 PAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLVKVPCHIFQTARDHSVPASVATYLKNHLGGK---NTVHWLNIE 246 (269)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGCCSCEEEEEEESBTTBCHHHHHHHHHHSSSC---EEEEEEEEE
T ss_pred hhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccccCCEEEEecCCCcccCHHHHHHHHHhCCCC---ceEEEeCCC
Confidence 00 01111223445567789999999999999999999998888877542 799999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 801 VHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 801 ~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
+|..... ...++.+.|.+||+++
T Consensus 247 gH~~~~~-~p~~~~~~i~~fl~~~ 269 (269)
T 4dnp_A 247 GHLPHLS-APTLLAQELRRALSHR 269 (269)
T ss_dssp SSCHHHH-CHHHHHHHHHHHHC--
T ss_pred CCCcccc-CHHHHHHHHHHHHhhC
Confidence 9986543 3457788888998763
No 143
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.73 E-value=3.6e-17 Score=170.10 Aligned_cols=211 Identities=17% Similarity=0.146 Sum_probs=137.7
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCc
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~ 649 (826)
.-+|..+++..+.|+ +.|+||++||.+.. ...|...+..|+++||.|+++|+||.+..... .....
T Consensus 10 ~~~g~~l~~~~~g~~------~~~~vv~~hG~~~~--~~~~~~~~~~l~~~G~~v~~~d~~G~G~s~~~------~~~~~ 75 (286)
T 3qit_A 10 EFGGNQICLCSWGSP------EHPVVLCIHGILEQ--GLAWQEVALPLAAQGYRVVAPDLFGHGRSSHL------EMVTS 75 (286)
T ss_dssp EETTEEEEEEEESCT------TSCEEEEECCTTCC--GGGGHHHHHHHHHTTCEEEEECCTTSTTSCCC------SSGGG
T ss_pred ecCCceEEEeecCCC------CCCEEEEECCCCcc--cchHHHHHHHhhhcCeEEEEECCCCCCCCCCC------CCCCC
Confidence 346778887777542 45789999998765 55788889999999999999999995443211 11123
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc----------------c
Q 003363 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV----------------G 713 (826)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~----------------~ 713 (826)
...+++.+.+..+++. ++.+++.++|||+||.+++.++.++|++++++|+.+|........ .
T Consensus 76 ~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (286)
T 3qit_A 76 YSSLTFLAQIDRVIQE--LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSS 153 (286)
T ss_dssp CSHHHHHHHHHHHHHH--SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCC---CCHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHh--cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCCccccchhhhHHHHHHHHHHhc
Confidence 3566777777777666 345789999999999999999999999999999999865432110 0
Q ss_pred CCC---CCCchhhhhccCcCCccCCCCCChhhHHHH---------------------------------hhcCcccccCC
Q 003363 714 TTD---IPDWCYVESYGSKGKDSFTESPSVEDLTRF---------------------------------HSKSPISHISK 757 (826)
Q Consensus 714 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~sp~~~~~~ 757 (826)
... ........... .... .....+....+ ...+....+.+
T Consensus 154 ~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T 3qit_A 154 TPQHPIFPDVATAASRL---RQAI-PSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKS 229 (286)
T ss_dssp CCCCCCBSSHHHHHHHH---HHHS-TTSCHHHHHHHHHHTEEEETTEEEECSCGGGGGHHHHTTTSCTTHHHHHHHHHHH
T ss_pred cccccccccHHHHHHHh---hcCC-cccCHHHHHHHhhccccccccceeeeechhhhccccccccccccchhHHHHHHhc
Confidence 000 00000000000 0000 00000000000 11112233467
Q ss_pred CCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCC
Q 003363 758 VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 805 (826)
Q Consensus 758 i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~ 805 (826)
+++|+|+++|++|..+|++....+.+.+.. ++++++++ ||...
T Consensus 230 i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~g-gH~~~ 272 (286)
T 3qit_A 230 IQVPTTLVYGDSSKLNRPEDLQQQKMTMTQ----AKRVFLSG-GHNLH 272 (286)
T ss_dssp CCSCEEEEEETTCCSSCHHHHHHHHHHSTT----SEEEEESS-SSCHH
T ss_pred cCCCeEEEEeCCCcccCHHHHHHHHHHCCC----CeEEEeeC-CchHh
Confidence 899999999999999999998888877754 68999999 99765
No 144
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.73 E-value=7.3e-17 Score=170.91 Aligned_cols=229 Identities=17% Similarity=0.141 Sum_probs=141.7
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCc
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~ 649 (826)
..++..++.+... .+..|+||++||++.. ...|...+..|++ ||.|+++|+||.+|. +.. ....
T Consensus 51 ~~~~~~~~~~~~g------~~~~~~vv~lHG~~~~--~~~~~~~~~~L~~-g~~vi~~D~~G~gG~--s~~-----~~~~ 114 (306)
T 2r11_A 51 STRFGQTHVIASG------PEDAPPLVLLHGALFS--STMWYPNIADWSS-KYRTYAVDIIGDKNK--SIP-----ENVS 114 (306)
T ss_dssp CCTTEEEEEEEES------CTTSCEEEEECCTTTC--GGGGTTTHHHHHH-HSEEEEECCTTSSSS--CEE-----CSCC
T ss_pred ecCCceEEEEeeC------CCCCCeEEEECCCCCC--HHHHHHHHHHHhc-CCEEEEecCCCCCCC--CCC-----CCCC
Confidence 3345566555432 2345889999998755 4457777788887 999999999996322 211 1112
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhcc------CCCC-CCc--
Q 003363 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG------TTDI-PDW-- 720 (826)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~------~~~~-~~~-- 720 (826)
...+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|......... .... ..+
T Consensus 115 ~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (306)
T 2r11_A 115 GTRTDYANWLLDVFDN--LGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALGLTASNGVE 192 (306)
T ss_dssp CCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHTTTSTTHHH
T ss_pred CCHHHHHHHHHHHHHh--cCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhHHHHHHHHH
Confidence 3466666666666665 3457899999999999999999999999999999998765311000 0000 000
Q ss_pred hhhhhccCcCCccCCCCCC---hhhHHH---------------HhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHH
Q 003363 721 CYVESYGSKGKDSFTESPS---VEDLTR---------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYA 782 (826)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~---~~~~~~---------------~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~ 782 (826)
.+...+... . ....+. .+.... .........+.++++|+|+++|++|..+|++.+.+++
T Consensus 193 ~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~ 269 (306)
T 2r11_A 193 TFLNWMMND-Q--NVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHSALHRA 269 (306)
T ss_dssp HHHHHHTTT-C--CCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHHHHHHH
T ss_pred HHHHHhhCC-c--cccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHHHHHHH
Confidence 000000000 0 000000 000000 0001122345678999999999999999998887666
Q ss_pred HHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 783 RALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 783 ~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
+.+. ..+++++++++||.+.... ..++.+.|.+||++
T Consensus 270 ~~~~---~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~ 306 (306)
T 2r11_A 270 SSFV---PDIEAEVIKNAGHVLSMEQ-PTYVNERVMRFFNA 306 (306)
T ss_dssp HHHS---TTCEEEEETTCCTTHHHHS-HHHHHHHHHHHHC-
T ss_pred HHHC---CCCEEEEeCCCCCCCcccC-HHHHHHHHHHHHhC
Confidence 5442 2479999999999765433 45778888888853
No 145
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.73 E-value=2e-17 Score=171.53 Aligned_cols=228 Identities=16% Similarity=0.216 Sum_probs=142.5
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..+++..+.|. +.+.|+||++||.+.. ...|...+..|++ +|.|+++|+||. |.+... .....
T Consensus 10 ~g~~l~y~~~g~~----~~~~~~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~D~~G~---G~S~~~-----~~~~~ 74 (266)
T 2xua_A 10 NGTELHYRIDGER----HGNAPWIVLSNSLGTD--LSMWAPQVAALSK-HFRVLRYDTRGH---GHSEAP-----KGPYT 74 (266)
T ss_dssp SSSEEEEEEESCS----SSCCCEEEEECCTTCC--GGGGGGGHHHHHT-TSEEEEECCTTS---TTSCCC-----SSCCC
T ss_pred CCEEEEEEEcCCc----cCCCCeEEEecCccCC--HHHHHHHHHHHhc-CeEEEEecCCCC---CCCCCC-----CCCCC
Confidence 5667776665432 1125889999996654 4567777888865 599999999994 443211 11234
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh---hcc------CCCCCCch-
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL---MVG------TTDIPDWC- 721 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~---~~~------~~~~~~~~- 721 (826)
++++.+.+..+++. +..+++.|+||||||.+++.+|.++|++++++|+.++...... ... ........
T Consensus 75 ~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (266)
T 2xua_A 75 IEQLTGDVLGLMDT--LKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHALAD 152 (266)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHh--cCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHHHHH
Confidence 55555555555554 3446899999999999999999999999999999887542100 000 00000000
Q ss_pred -hhhh-ccCcC-----------CccCCCCCChhh----HHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHH
Q 003363 722 -YVES-YGSKG-----------KDSFTESPSVED----LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA 784 (826)
Q Consensus 722 -~~~~-~~~~~-----------~~~~~~~~~~~~----~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~ 784 (826)
.... +.... ...+.. ..... ...+...+....+.++++|+|+++|++|..+|++.++.+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~ 231 (266)
T 2xua_A 153 AVLPRWFTADYMEREPVVLAMIRDVFVH-TDKEGYASNCEAIDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQA 231 (266)
T ss_dssp HHHHHHSCHHHHHHCHHHHHHHHHHHHT-SCHHHHHHHHHHHHHCCCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred HHHHHHcCcccccCCHHHHHHHHHHHhh-CCHHHHHHHHHHHhccCchhhhccCCCCEEEEEcCCCCcCCHHHHHHHHHh
Confidence 0000 00000 000000 00000 011112233455778999999999999999999998888877
Q ss_pred HHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 785 LREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 785 l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
+.. .++++++ +||...... ..++.+.+.+||.+
T Consensus 232 ~~~----~~~~~~~-~gH~~~~e~-p~~~~~~i~~fl~~ 264 (266)
T 2xua_A 232 IAG----ARYVELD-ASHISNIER-ADAFTKTVVDFLTE 264 (266)
T ss_dssp STT----CEEEEES-CCSSHHHHT-HHHHHHHHHHHHTC
T ss_pred CCC----CEEEEec-CCCCchhcC-HHHHHHHHHHHHHh
Confidence 754 6899999 999875443 44788889999864
No 146
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.73 E-value=7.8e-18 Score=177.05 Aligned_cols=232 Identities=16% Similarity=0.142 Sum_probs=136.0
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..++...+.+ +.+.|.||++||+++.. ..|......++++||.|+++|+||.| .+... . .....
T Consensus 13 ~g~~l~~~~~g~-----~~~~~~vvllHG~~~~~--~~~~~~~~~l~~~g~~vi~~D~~G~G---~S~~~---~-~~~~~ 78 (293)
T 1mtz_A 13 NGIYIYYKLCKA-----PEEKAKLMTMHGGPGMS--HDYLLSLRDMTKEGITVLFYDQFGCG---RSEEP---D-QSKFT 78 (293)
T ss_dssp TTEEEEEEEECC-----SSCSEEEEEECCTTTCC--SGGGGGGGGGGGGTEEEEEECCTTST---TSCCC---C-GGGCS
T ss_pred CCEEEEEEEECC-----CCCCCeEEEEeCCCCcc--hhHHHHHHHHHhcCcEEEEecCCCCc---cCCCC---C-CCccc
Confidence 455565444322 12237799999976542 23333344456789999999999954 33211 1 11123
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccC-----CCCCCc--hhh-
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT-----TDIPDW--CYV- 723 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~-----~~~~~~--~~~- 723 (826)
++++.+.+..+++.- .+.+++.|+||||||.+++.+|.++|++++++|+.+|.......... ...+.. ...
T Consensus 79 ~~~~~~dl~~~~~~l-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (293)
T 1mtz_A 79 IDYGVEEAEALRSKL-FGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPAKYRDAIK 157 (293)
T ss_dssp HHHHHHHHHHHHHHH-HTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-cCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccChHHHHHHHHHHHHhcCHHHHHHHH
Confidence 444444444444431 02368999999999999999999999999999999987653211000 000000 000
Q ss_pred -----------------hhccCcCCccCCCCCChhhHHH---------Hh---------------hcCcccccCCCCCcE
Q 003363 724 -----------------ESYGSKGKDSFTESPSVEDLTR---------FH---------------SKSPISHISKVKTPT 762 (826)
Q Consensus 724 -----------------~~~~~~~~~~~~~~~~~~~~~~---------~~---------------~~sp~~~~~~i~~Pv 762 (826)
..+...........+. ..... +. ..+....+.++++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~ 236 (293)
T 1mtz_A 158 KYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPP-EVLKSLEYAERRNVYRIMNGPNEFTITGTIKDWDITDKISAIKIPT 236 (293)
T ss_dssp HHHHHTCTTCHHHHHHHHHHHHHHTSCSSCCCH-HHHHHHHHHHHSSHHHHHTCSBTTBCCSTTTTCBCTTTGGGCCSCE
T ss_pred HhhccCCcChHHHHHHHHHHHHhhcccccCchH-HHHHhHhhhccchhhhhccCcceecccccccCCChhhhhccCCCCE
Confidence 0000000000001110 00000 00 111223456789999
Q ss_pred EEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 763 IFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 763 Lii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
|+++|++| .+++..+.++.+.+.. .++++++++||..... ...++...+.+||.++|
T Consensus 237 lii~G~~D-~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~~l 293 (293)
T 1mtz_A 237 LITVGEYD-EVTPNVARVIHEKIAG----SELHVFRDCSHLTMWE-DREGYNKLLSDFILKHL 293 (293)
T ss_dssp EEEEETTC-SSCHHHHHHHHHHSTT----CEEEEETTCCSCHHHH-SHHHHHHHHHHHHHTCC
T ss_pred EEEeeCCC-CCCHHHHHHHHHhCCC----ceEEEeCCCCCCcccc-CHHHHHHHHHHHHHhcC
Confidence 99999999 7788877777776643 7899999999987544 34578889999998764
No 147
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.73 E-value=3.6e-17 Score=170.75 Aligned_cols=232 Identities=14% Similarity=0.113 Sum_probs=144.7
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH---HHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCC
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~ 648 (826)
.+.++..+ |.|++ .|+||++||++.......|.. ..+.+++.||+|+++|++++..+.. +.. . ..+
T Consensus 21 ~~~~~~~~-~~P~~------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~~~-~~~--~-~~~ 89 (280)
T 1r88_A 21 MGRDIPVA-FLAGG------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTN-WEQ--D-GSK 89 (280)
T ss_dssp TTEEEEEE-EECCS------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTTSB-CSS--C-TTC
T ss_pred cCCcceEE-EeCCC------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCccCC-CCC--C-CCC
Confidence 46778777 77763 289999999854322334443 4566778899999999987544321 100 0 001
Q ss_pred cchHHH--HHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhc
Q 003363 649 SQDVND--VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESY 726 (826)
Q Consensus 649 ~~~~~D--~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~ 726 (826)
...+ ..+.+.++.++..+++++++|+|+||||++++.++.++|++|+++++.+|..++........+.. .....
T Consensus 90 --~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~--~~~~~ 165 (280)
T 1r88_A 90 --QWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAA--GMQQF 165 (280)
T ss_dssp --BHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHHHHHHHH--HHHHH
T ss_pred --cHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccchhhHHH--Hhhhc
Confidence 1212 12334444444457888999999999999999999999999999999999876432110000000 00000
Q ss_pred cCcCCccCCCCCChhhHHHHhhcCcccccCCC---CCcEEEEE----eCCCCC-------CCcHHHHHHHHHHHhCC-CC
Q 003363 727 GSKGKDSFTESPSVEDLTRFHSKSPISHISKV---KTPTIFLL----GAQDLR-------VPVSNGLQYARALREKG-VE 791 (826)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i---~~PvLii~----G~~D~~-------vp~~~~~~~~~~l~~~g-~~ 791 (826)
+......+.+.+ ....+...+|...++++ .+|+++.| |+.|.. ++.+++++++++|++.| ++
T Consensus 166 ~~~~~~~~~g~~---~~~~~~~~~p~~~~~~~~~~~~pv~i~~~~~~G~~D~~~~~~~~~~~~~~~~~~~~~L~~~g~~~ 242 (280)
T 1r88_A 166 GGVDTNGMWGAP---QLGRWKWHDPWVHASLLAQNNTRVWVWSPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSVGGHN 242 (280)
T ss_dssp HCCCTHHHHCCG---GGSTTGGGCTTTTHHHHHHTTCEEEEECCSSCCCSSGGGGTTCHHHHHHHHHHHHHHHHHTTCCS
T ss_pred cccchhhhcCCC---chhhhHhcCHHHHHHhhhccCCeEEEEeccCCCCCCcccccchhHHHHHHHHHHHHHHHHCCCcc
Confidence 000000000111 01234455666655544 58999999 999984 68899999999999999 99
Q ss_pred EEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 792 TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 792 ~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
+++.++++++|.+.. ....+...+.||.+-
T Consensus 243 ~~~~~~~~g~H~~~~---w~~~l~~~l~~~~~~ 272 (280)
T 1r88_A 243 GHFDFPASGDNGWGS---WAPQLGAMSGDIVGA 272 (280)
T ss_dssp EEEECCSSCCSSHHH---HHHHHHHHHHHHHHH
T ss_pred eEEEecCCCCcChhH---HHHHHHHHHHHHHHH
Confidence 999999888997632 123344555565543
No 148
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.73 E-value=2.9e-17 Score=171.84 Aligned_cols=215 Identities=16% Similarity=0.214 Sum_probs=133.0
Q ss_pred CcEEEEEcCCCCC-CCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 592 DPLIVVLHGGPHS-VSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 592 ~P~vv~~HGg~~~-~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
.|.||++||.+.. .....|...+..| +.||.|+++|+||. |.+.. +.. ....+++..+.+..+++. ++.
T Consensus 25 g~~vvllHG~~~~~~~~~~w~~~~~~L-~~~~~vi~~Dl~G~---G~S~~---~~~-~~~~~~~~a~dl~~~l~~--l~~ 94 (282)
T 1iup_A 25 GQPVILIHGSGPGVSAYANWRLTIPAL-SKFYRVIAPDMVGF---GFTDR---PEN-YNYSKDSWVDHIIGIMDA--LEI 94 (282)
T ss_dssp SSEEEEECCCCTTCCHHHHHTTTHHHH-TTTSEEEEECCTTS---TTSCC---CTT-CCCCHHHHHHHHHHHHHH--TTC
T ss_pred CCeEEEECCCCCCccHHHHHHHHHHhh-ccCCEEEEECCCCC---CCCCC---CCC-CCCCHHHHHHHHHHHHHH--hCC
Confidence 3679999995432 2122455566666 67899999999994 44321 110 123456666655555555 345
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchh-------hhccCCCCCCchhh----hhccCcC-------Cc
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA-------LMVGTTDIPDWCYV----ESYGSKG-------KD 732 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~-------~~~~~~~~~~~~~~----~~~~~~~-------~~ 732 (826)
+++.|+||||||.+++.+|.++|++++++|+.+|..... ..... .+..... ..+.... ..
T Consensus 95 ~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (282)
T 1iup_A 95 EKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGY--TPSIENMRNLLDIFAYDRSLVTDELAR 172 (282)
T ss_dssp CSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTC--CSCHHHHHHHHHHHCSSGGGCCHHHHH
T ss_pred CceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcC--CCcHHHHHHHHHHhhcCcccCCHHHHH
Confidence 789999999999999999999999999999998754210 00000 0000000 0000000 00
Q ss_pred -cC--CCCCCh-hhHHHHh--------h--cCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeC
Q 003363 733 -SF--TESPSV-EDLTRFH--------S--KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 798 (826)
Q Consensus 733 -~~--~~~~~~-~~~~~~~--------~--~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p 798 (826)
.+ ...+.. .....+. . ......+.++++|+|+++|++|..+|++.+.++.+.+.. .++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~p~~~~~~~~~~~~~----~~~~~i~ 248 (282)
T 1iup_A 173 LRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDR----AQLHVFG 248 (282)
T ss_dssp HHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTT----EEEEEES
T ss_pred HHHhhccChHHHHHHHHHHhccccccccccccchhhhhhcCCCEEEEecCCCCCCCHHHHHHHHHhCCC----CeEEEEC
Confidence 00 000100 0000000 0 001145678999999999999999999998888877754 7999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 799 NDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 799 ~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
++||...... ..++.+.+.+|+++
T Consensus 249 ~~gH~~~~e~-p~~~~~~i~~fl~~ 272 (282)
T 1iup_A 249 RCGHWTQIEQ-TDRFNRLVVEFFNE 272 (282)
T ss_dssp SCCSCHHHHS-HHHHHHHHHHHHHT
T ss_pred CCCCCccccC-HHHHHHHHHHHHhc
Confidence 9999865433 45788889999975
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.73 E-value=1.6e-16 Score=197.29 Aligned_cols=339 Identities=6% Similarity=-0.019 Sum_probs=201.1
Q ss_pred EEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCC--CC
Q 003363 100 TFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPE--NE 177 (826)
Q Consensus 100 ~~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~--~~ 177 (826)
..|.+|| ++|+|... ..||++++ .+++.++|+..+ ..+..++|||||++|||.+... ++
T Consensus 18 ~~~~~S~--~~iaf~~~----------~~l~~~~~--~gg~~~~lt~~~-----~~v~~~~~SPDG~~la~~s~~~~~~~ 78 (1045)
T 1k32_A 18 LNPDIHG--DRIIFVCC----------DDLWEHDL--KSGSTRKIVSNL-----GVINNARFFPDGRKIAIRVMRGSSLN 78 (1045)
T ss_dssp EEEEEET--TEEEEEET----------TEEEEEET--TTCCEEEEECSS-----SEEEEEEECTTSSEEEEEEEESTTCC
T ss_pred eCcEEeC--CEEEEEEC----------CcEEEEEC--CCCcEEEeeeCC-----CcccCeEECCCCCEEEEEEeeccCCC
Confidence 3455564 58999753 36888876 455677887665 5689999999999999998652 24
Q ss_pred CCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCC-----CCCccCCCCCCCCC-----
Q 003363 178 SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS-----KPTFSLGSTKGGSS----- 246 (826)
Q Consensus 178 ~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~-----~~~~~~~~~~~~~~----- 246 (826)
..+++++. .+++.++++.......+.. -....++|||||+ |+|.+...... ...++...+.....
T Consensus 79 ~~~i~~~d~~~g~~~~lt~~~~~~~~~~---~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~ 154 (1045)
T 1k32_A 79 TADLYFYNGENGEIKRITYFSGKSTGRR---MFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPA 154 (1045)
T ss_dssp EEEEEEEETTTTEEEECCCCCEEEETTE---ECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSC
T ss_pred CCeEEEEECCCCCeEEcccCCCcccccc---cccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCc
Confidence 45677666 4555554443221110000 0015789999998 88877543111 11111100000000
Q ss_pred ---------------------C-----------------------ccCCCCCCcceeecCCCccCC--CccCceEEEEEc
Q 003363 247 ---------------------D-----------------------KDCNSWKGQGDWEEDWGETYA--GKRQPSLFVINI 280 (826)
Q Consensus 247 ---------------------~-----------------------~~~~~~~~~~~~~~d~g~~~~--~~~~~~l~v~d~ 280 (826)
+ ..+........|+++ .-.+. ..+...||.++.
T Consensus 155 ~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~ 233 (1045)
T 1k32_A 155 THILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDL 233 (1045)
T ss_dssp SEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEET
T ss_pred ceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeC
Confidence 0 000001111223333 11111 113457888888
Q ss_pred cCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCccee-----------------------------eeeeee-
Q 003363 281 NSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRK-----------------------------LGIKYC- 330 (826)
Q Consensus 281 ~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~-----------------------------~g~~~~- 330 (826)
++++.+.++ ... ....++|||||+. |+|.... .-.. ....+.
T Consensus 234 ~g~~~~~l~--~~~-~~~~~~~SpDG~~----la~~~~~-~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~ 305 (1045)
T 1k32_A 234 DGKDLRKHT--SFT-DYYPRHLNTDGRR----ILFSKGG-SIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSP 305 (1045)
T ss_dssp TSCSCEECC--CCC-SSCEEEEEESSSC----EEEEETT-EEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEE
T ss_pred CCCcceEec--CCC-CcceeeEcCCCCE----EEEEeCC-EEEEecCCceEeeeeccCcccccccccccccccceeeecC
Confidence 888888873 222 3456799999998 8886421 0000 000110
Q ss_pred cc-------CCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCc-cccCceecCCCCEEEEEeccCCCCCCCCcc
Q 003363 331 YN-------RPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS-SAFFPRFSPDGKFLVFLSAKSSVDSGAHSA 402 (826)
Q Consensus 331 ~~-------~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~-~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~ 402 (826)
.+ ....|+.+++ .++..++++.+.. ....+.|| ||+.|+|.+.+
T Consensus 306 pdG~~la~~~~~~i~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~---------- 357 (1045)
T 1k32_A 306 LDGDLIAFVSRGQAFIQDV-----------------SGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTRE---------- 357 (1045)
T ss_dssp CGGGCEEEEETTEEEEECT-----------------TSSBEEECSCCSCEEEEEECSS-SEEEEEEEETT----------
T ss_pred CCCCEEEEEEcCEEEEEcC-----------------CCCceEEccCCCcceEEeeeEc-CCCeEEEEECC----------
Confidence 00 0224455554 5666777777666 78889999 99999998852
Q ss_pred cceEE-EEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEE
Q 003363 403 TDSLH-RIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 481 (826)
Q Consensus 403 ~~~l~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~ 481 (826)
.+|| ++|+.++....++ ... ..+..++|||||+.|++... ...|+.+|+.+|+.+
T Consensus 358 -~~l~~~~d~~~~~~~~l~-~~~-------------------~~~~~~~~SpDG~~la~~~~---~~~v~~~d~~tg~~~ 413 (1045)
T 1k32_A 358 -GDFLGIYDYRTGKAEKFE-ENL-------------------GNVFAMGVDRNGKFAVVAND---RFEIMTVDLETGKPT 413 (1045)
T ss_dssp -EEEEEEEETTTCCEEECC-CCC-------------------CSEEEEEECTTSSEEEEEET---TSEEEEEETTTCCEE
T ss_pred -CceEEEEECCCCCceEec-CCc-------------------cceeeeEECCCCCEEEEECC---CCeEEEEECCCCceE
Confidence 4699 9998876544333 110 12336789999998887643 347899999999999
Q ss_pred EecC-CCCCeeeEEEeecCCEEEEEEeCC------CCCCeEEEEeecc
Q 003363 482 RITP-AESNFSWSLLTLDGDNIIAVSSSP------VDVPQVKYGYFVD 522 (826)
Q Consensus 482 ~lt~-~~~~~~~~~~s~dg~~l~~~~s~~------~~p~~l~~~~~~~ 522 (826)
.+.. ....+....|+|||+.+++..... ..+..|++.++.+
T Consensus 414 ~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 414 VIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred EeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 8874 333445678999999998887654 4456788888654
No 150
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.72 E-value=1.5e-17 Score=171.93 Aligned_cols=218 Identities=14% Similarity=0.115 Sum_probs=133.9
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHH-CCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (826)
+.|+||++||.+.. ...|...+..|++ +||.|+++|+||.+..... . . ...+++.+.+..+++.. .+
T Consensus 20 ~~~~vv~lhG~~~~--~~~~~~~~~~l~~~~g~~v~~~d~~G~G~s~~~---~---~---~~~~~~~~~~~~~l~~~-~~ 87 (272)
T 3fsg_A 20 SGTPIIFLHGLSLD--KQSTCLFFEPLSNVGQYQRIYLDLPGMGNSDPI---S---P---STSDNVLETLIEAIEEI-IG 87 (272)
T ss_dssp CSSEEEEECCTTCC--HHHHHHHHTTSTTSTTSEEEEECCTTSTTCCCC---S---S---CSHHHHHHHHHHHHHHH-HT
T ss_pred CCCeEEEEeCCCCc--HHHHHHHHHHHhccCceEEEEecCCCCCCCCCC---C---C---CCHHHHHHHHHHHHHHH-hC
Confidence 34789999997654 4456666767776 7999999999995443211 1 1 33444444443333331 23
Q ss_pred CCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccC----cCCccC---CCCCChhh
Q 003363 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS----KGKDSF---TESPSVED 742 (826)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~ 742 (826)
.+++.|+|||+||.+++.++.++|++++++|+.+|.....................+.. .....+ ........
T Consensus 88 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (272)
T 3fsg_A 88 ARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVENKEYFADFLSMNVIINNQA 167 (272)
T ss_dssp TCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCCCTTGGGHHHHHHHCSEESHHH
T ss_pred CCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhcccCHHHHHHHHHHhccCCCch
Confidence 47899999999999999999999999999999988753221111000000000000000 000000 00000000
Q ss_pred HHH-------------------Hhhc-----CcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeC
Q 003363 743 LTR-------------------FHSK-----SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP 798 (826)
Q Consensus 743 ~~~-------------------~~~~-----sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p 798 (826)
... +... .+...+.++++|+|+++|++|..+|++.+.++.+.++ .+++++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~----~~~~~~~~ 243 (272)
T 3fsg_A 168 WHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNINYQFPFKIMVGRNDQVVGYQEQLKLINHNE----NGEIVLLN 243 (272)
T ss_dssp HHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCCCSSCEEEEEETTCTTTCSHHHHHHHTTCT----TEEEEEES
T ss_pred hHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhccCCCCEEEEEeCCCCcCCHHHHHHHHHhcC----CCeEEEec
Confidence 000 0000 0111347789999999999999999999888776664 48999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 799 NDVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 799 ~~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
++||.+... ...++.+.+.+||++..
T Consensus 244 ~~gH~~~~~-~~~~~~~~i~~fl~~~~ 269 (272)
T 3fsg_A 244 RTGHNLMID-QREAVGFHFDLFLDELN 269 (272)
T ss_dssp SCCSSHHHH-THHHHHHHHHHHHHHHH
T ss_pred CCCCCchhc-CHHHHHHHHHHHHHHhh
Confidence 999987643 34578889999998753
No 151
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.72 E-value=7.5e-17 Score=168.87 Aligned_cols=231 Identities=15% Similarity=0.133 Sum_probs=137.7
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCC-CCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcc
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~-~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~ 650 (826)
+|..++.....+ ...|+||++||.+ +......|...+..|++. |.|+++|+||.| .+... .. ...
T Consensus 15 ~g~~l~y~~~g~------~g~p~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~D~~G~G---~S~~~---~~-~~~ 80 (285)
T 1c4x_A 15 GTLASHALVAGD------PQSPAVVLLHGAGPGAHAASNWRPIIPDLAEN-FFVVAPDLIGFG---QSEYP---ET-YPG 80 (285)
T ss_dssp TTSCEEEEEESC------TTSCEEEEECCCSTTCCHHHHHGGGHHHHHTT-SEEEEECCTTST---TSCCC---SS-CCS
T ss_pred CCEEEEEEecCC------CCCCEEEEEeCCCCCCcchhhHHHHHHHHhhC-cEEEEecCCCCC---CCCCC---CC-ccc
Confidence 456665443321 2346799999964 222234566667777665 999999999944 43211 10 022
Q ss_pred hHHHH----HHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh--------hccCCCCC
Q 003363 651 DVNDV----LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL--------MVGTTDIP 718 (826)
Q Consensus 651 ~~~D~----~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~--------~~~~~~~~ 718 (826)
.++++ .+.+..+++. ++.+++.|+||||||.+++.++.++|++++++|+.+|...... +......+
T Consensus 81 ~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (285)
T 1c4x_A 81 HIMSWVGMRVEQILGLMNH--FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAFYADP 158 (285)
T ss_dssp SHHHHHHHHHHHHHHHHHH--HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTGGGSC
T ss_pred chhhhhhhHHHHHHHHHHH--hCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHHhccc
Confidence 34555 5545444444 2347899999999999999999999999999999987542100 00000000
Q ss_pred CchhhhhccCcCCccCCCC--C------------ChhhHHHHhh------------cCcccccCCCCCcEEEEEeCCCCC
Q 003363 719 DWCYVESYGSKGKDSFTES--P------------SVEDLTRFHS------------KSPISHISKVKTPTIFLLGAQDLR 772 (826)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~--~------------~~~~~~~~~~------------~sp~~~~~~i~~PvLii~G~~D~~ 772 (826)
.+................. . ..+....+.. ......+.++++|+|+++|++|..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 238 (285)
T 1c4x_A 159 RLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRLPHDVLVFHGRQDRI 238 (285)
T ss_dssp CHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTCCSCEEEEEETTCSS
T ss_pred cHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccCCCCEEEEEeCCCee
Confidence 0000000000000000000 0 0000000000 012234678899999999999999
Q ss_pred CCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 773 VPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 773 vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
+|++.++.+++.+. ..++++++++||...... ..++.+.+.+||.+
T Consensus 239 ~p~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 284 (285)
T 1c4x_A 239 VPLDTSLYLTKHLK----HAELVVLDRCGHWAQLER-WDAMGPMLMEHFRA 284 (285)
T ss_dssp SCTHHHHHHHHHCS----SEEEEEESSCCSCHHHHS-HHHHHHHHHHHHHC
T ss_pred eCHHHHHHHHHhCC----CceEEEeCCCCcchhhcC-HHHHHHHHHHHHhc
Confidence 99999888877765 379999999999865433 45788889999864
No 152
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.72 E-value=2.5e-17 Score=170.82 Aligned_cols=214 Identities=13% Similarity=0.129 Sum_probs=135.4
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
+.|+||++||++... ..|...+..|++ ||.|+++|+||.+..... .......++++.+.+..+++. ++.
T Consensus 22 ~~~~vv~~HG~~~~~--~~~~~~~~~L~~-~~~vi~~d~~G~G~s~~~------~~~~~~~~~~~~~~~~~~~~~--l~~ 90 (278)
T 3oos_A 22 EGPPLCVTHLYSEYN--DNGNTFANPFTD-HYSVYLVNLKGCGNSDSA------KNDSEYSMTETIKDLEAIREA--LYI 90 (278)
T ss_dssp SSSEEEECCSSEECC--TTCCTTTGGGGG-TSEEEEECCTTSTTSCCC------SSGGGGSHHHHHHHHHHHHHH--TTC
T ss_pred CCCeEEEEcCCCcch--HHHHHHHHHhhc-CceEEEEcCCCCCCCCCC------CCcccCcHHHHHHHHHHHHHH--hCC
Confidence 357899999977553 345556677776 999999999995443211 112233467777777766666 345
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCC-----CCchh----hhhccCc------------
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDI-----PDWCY----VESYGSK------------ 729 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~-----~~~~~----~~~~~~~------------ 729 (826)
+++.|+|||+||.+++.++.++|++++++|+.+|............. ..... .......
T Consensus 91 ~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (278)
T 3oos_A 91 NKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNALNDDSTVQEERKALSR 170 (278)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBGGGGGSTTSTTSTTSTTHHHHHHHHHHHTCTTSCHHHHHHHHH
T ss_pred CeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccccccccccchhhhhhchhHHHHHHHHHhhcccccCchHHHHHHH
Confidence 68999999999999999999999999999999998762111100000 00000 0000000
Q ss_pred -----------CCccCCCCCC-----hhhHHHHh-----hcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhC
Q 003363 730 -----------GKDSFTESPS-----VEDLTRFH-----SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK 788 (826)
Q Consensus 730 -----------~~~~~~~~~~-----~~~~~~~~-----~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~ 788 (826)
....+...+. ......+. ..+....+.++++|+|+++|++|..+|++.+.++.+.+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~- 249 (278)
T 3oos_A 171 EWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVRQKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPN- 249 (278)
T ss_dssp HHHHHHCSCHHHHHHHTTSCCCCEECHHHHHHHHHTTGGGCBCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTT-
T ss_pred HHhhcccCCcHHHHHHhhccccchhHHHHHHHhhhcccccccHHHHHhCCCCCEEEEEeccCCCCCHHHHHHHHhhCCC-
Confidence 0000000000 01111111 2233455678999999999999999999999888887753
Q ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 003363 789 GVETKVIVFPNDVHGIERPQSDFESFLNIGLW 820 (826)
Q Consensus 789 g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w 820 (826)
+++++++++||.+... ...++.+.+.+|
T Consensus 250 ---~~~~~~~~~gH~~~~~-~p~~~~~~i~~f 277 (278)
T 3oos_A 250 ---ATLTKFEESNHNPFVE-EIDKFNQFVNDT 277 (278)
T ss_dssp ---EEEEEETTCSSCHHHH-SHHHHHHHHHHT
T ss_pred ---cEEEEcCCcCCCcccc-cHHHHHHHHHhh
Confidence 7999999999986533 333555555555
No 153
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.72 E-value=9.7e-18 Score=182.87 Aligned_cols=234 Identities=14% Similarity=0.133 Sum_probs=143.6
Q ss_pred CCCCcEEEEEcCCCCCCCC----------c-cchHHH---HHHHHCCcEEEEECCCCCCC--------CchhhhhcCCC-
Q 003363 589 CSCDPLIVVLHGGPHSVSL----------S-SYSKSL---AFLSSVGYSLLIVNYRGSLG--------FGEEALQSLPG- 645 (826)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~----------~-~~~~~~---~~la~~G~~Vl~~d~rG~~g--------~G~~~~~~~~~- 645 (826)
..+.|+||++||.+..... . -|...+ ..|...||.|+++|+||.|. +|........+
T Consensus 39 ~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~G~S~G~~~g~~g~~~~~p~~~~ 118 (377)
T 3i1i_A 39 RERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQVKNPHVITTGPKSINPKTGD 118 (377)
T ss_dssp TTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECCTTCSCTTSTTCCCCSTTSBCTTTSS
T ss_pred CCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecccccccccCCCcccCCCCCCCCCCCC
Confidence 3456899999997665322 0 133333 46667899999999998532 12111000000
Q ss_pred ----CCCcchHHHHHHHHHHHHHcCCCCCCcEE-EEEecchHHHHHHHHHhCCCceeEEEe-cCCccchhhh-cc-----
Q 003363 646 ----KVGSQDVNDVLTAIDHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAA-RNPLCNLALM-VG----- 713 (826)
Q Consensus 646 ----~~~~~~~~D~~~~i~~l~~~~~~d~~rv~-l~G~S~GG~~a~~~a~~~p~~~~a~v~-~~p~~~~~~~-~~----- 713 (826)
.+....++|+.+.+..+++. ++.+++. |+||||||.+++.+|.++|++++++|+ .++....... ..
T Consensus 119 ~~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~ 196 (377)
T 3i1i_A 119 EYAMDFPVFTFLDVARMQCELIKD--MGIARLHAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQNPIITSVNVAQNA 196 (377)
T ss_dssp BCGGGSCCCCHHHHHHHHHHHHHH--TTCCCBSEEEEETHHHHHHHHHHHHCTTTBSEEEEESCCSBCCHHHHHHTTHHH
T ss_pred cccCCCCCCCHHHHHHHHHHHHHH--cCCCcEeeEEeeCHhHHHHHHHHHHChHHHHHhcccCcCCCcCCchhhHHHHHH
Confidence 01134677888888777776 4456786 999999999999999999999999999 6654331000 00
Q ss_pred ---CCCCCCch-----------------------------hhhhccCcCCcc-----C-----------------CCCCC
Q 003363 714 ---TTDIPDWC-----------------------------YVESYGSKGKDS-----F-----------------TESPS 739 (826)
Q Consensus 714 ---~~~~~~~~-----------------------------~~~~~~~~~~~~-----~-----------------~~~~~ 739 (826)
....+.|. +...+....... + .....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (377)
T 3i1i_A 197 IEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFEKEINKLTYRSIELVD 276 (377)
T ss_dssp HHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGGTCTTCCCHHHHHHHHHHHHTTTTCC
T ss_pred HHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhccccccccccchhHHHHHHHHHHhhhhcccC
Confidence 00000000 000000000000 0 00000
Q ss_pred hhh----HHHHhhcCc-------ccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCC-CCCCCCCC
Q 003363 740 VED----LTRFHSKSP-------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN-DVHGIERP 807 (826)
Q Consensus 740 ~~~----~~~~~~~sp-------~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~-~~H~~~~~ 807 (826)
... ...+...+. ...+.++++|+|+++|++|..+|++.+..+++.+++.+..++++++++ +||.....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~gH~~~~e 356 (377)
T 3i1i_A 277 ANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKYAEVYEIESINGHMAGVF 356 (377)
T ss_dssp HHHHHHHHHHHHHCBTTTTSSCHHHHHHTCCSEEEEECBTTCSSSCTHHHHHHHHHHHHTTCCEEECCBCCTTGGGHHHH
T ss_pred HHHHHHHHHHHhhcccccccCCHHHHHhhCCCCEEEEecCCccccCHHHHHHHHHHHHhcCCCceEEEcCCCCCCcchhc
Confidence 000 000011111 234578899999999999999999999999999987777899999998 99976544
Q ss_pred CCHHHHHHHHHHHHHHHc
Q 003363 808 QSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 808 ~~~~~~~~~i~~w~~~~l 825 (826)
+. .++.+.|.+||++++
T Consensus 357 ~p-~~~~~~i~~fl~~~~ 373 (377)
T 3i1i_A 357 DI-HLFEKKVYEFLNRKV 373 (377)
T ss_dssp CG-GGTHHHHHHHHHSCC
T ss_pred CH-HHHHHHHHHHHHhhh
Confidence 33 477889999998875
No 154
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.72 E-value=2.1e-17 Score=181.00 Aligned_cols=192 Identities=18% Similarity=0.128 Sum_probs=133.6
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhh------hcCCCCC-------Cc-----
Q 003363 588 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEAL------QSLPGKV-------GS----- 649 (826)
Q Consensus 588 ~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~------~~~~~~~-------~~----- 649 (826)
.++++|+||++||++.. ...|...++.|+++||.|+++|+||.+....... ......+ +.
T Consensus 94 ~~~~~P~Vv~~HG~~~~--~~~~~~~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 171 (383)
T 3d59_A 94 PGEKYPLVVFSHGLGAF--RTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHI 171 (383)
T ss_dssp CSSCEEEEEEECCTTCC--TTTTHHHHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCEEEECCCCCHHHHHHH
T ss_pred cCCCCCEEEEcCCCCCC--chHHHHHHHHHHhCceEEEEeccCCCCccceeecCCccccccCCceeeeccccCcccchhh
Confidence 34689999999997755 4567888999999999999999998654321000 0000000 10
Q ss_pred ------chHHHHHHHHHHHHH--------------------cCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecC
Q 003363 650 ------QDVNDVLTAIDHVID--------------------MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARN 703 (826)
Q Consensus 650 ------~~~~D~~~~i~~l~~--------------------~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~ 703 (826)
...+|+..+++++.+ ...+|.+||+++|||+||.+++.++.+.+ +++++|+.+
T Consensus 172 ~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~-~v~a~v~~~ 250 (383)
T 3d59_A 172 RNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQ-RFRCGIALD 250 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEES
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHHHhhCC-CccEEEEeC
Confidence 114688889999876 34577889999999999999999988755 699999988
Q ss_pred CccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHH
Q 003363 704 PLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYAR 783 (826)
Q Consensus 704 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~ 783 (826)
|... +... ..+.++++|+|++||++|..+ ... +..+
T Consensus 251 ~~~~------------------------------p~~~-----------~~~~~i~~P~Lii~g~~D~~~--~~~-~~~~ 286 (383)
T 3d59_A 251 AWMF------------------------------PLGD-----------EVYSRIPQPLFFINSEYFQYP--ANI-IKMK 286 (383)
T ss_dssp CCCT------------------------------TCCG-----------GGGGSCCSCEEEEEETTTCCH--HHH-HHHH
T ss_pred CccC------------------------------CCch-----------hhhccCCCCEEEEecccccch--hhH-HHHH
Confidence 7421 0000 122567899999999999854 332 3346
Q ss_pred HHHhCCCCEEEEEeCCCCCCCCC------------------CCCH----HHHHHHHHHHHHHHcC
Q 003363 784 ALREKGVETKVIVFPNDVHGIER------------------PQSD----FESFLNIGLWFKKYCK 826 (826)
Q Consensus 784 ~l~~~g~~~~~~~~p~~~H~~~~------------------~~~~----~~~~~~i~~w~~~~l~ 826 (826)
++...+.+.+++++++++|.+.. .... ..+...+++||+++|+
T Consensus 287 ~l~~~~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Fl~~~L~ 351 (383)
T 3d59_A 287 KCYSPDKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLG 351 (383)
T ss_dssp TTCCTTSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHHHHHHHHHHcC
Confidence 66667788999999999998621 1112 1233469999999975
No 155
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.72 E-value=1.1e-17 Score=174.36 Aligned_cols=217 Identities=15% Similarity=0.123 Sum_probs=143.0
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHH-HHHCC---cEEEEECCCCCCCCchhhh--hcCCC
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAF-LSSVG---YSLLIVNYRGSLGFGEEAL--QSLPG 645 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~-la~~G---~~Vl~~d~rG~~g~G~~~~--~~~~~ 645 (826)
.|.++..++|.|++++..+++|+|+++||++.......+...... .++.| ++|+.+|+++...++...+ +-.+.
T Consensus 28 ~g~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~~~~~r~~~~~~~ 107 (275)
T 2qm0_A 28 EGKEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAFSGEERCYDFTPS 107 (275)
T ss_dssp TCCEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSCCHHHHHHHHCSS
T ss_pred CCCEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcCcccccccccCCC
Confidence 577899999999998777899999999997631111112112222 24567 9999999998543321100 00000
Q ss_pred ----------------CCC-cchHHHHH--HHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCcc
Q 003363 646 ----------------KVG-SQDVNDVL--TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (826)
Q Consensus 646 ----------------~~~-~~~~~D~~--~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 706 (826)
..+ .....+.+ +.+.++.++..+|+++++|+|||+||++++.++.++|+.|+++++.+|..
T Consensus 108 ~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~~f~~~~~~s~~~ 187 (275)
T 2qm0_A 108 VISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPSI 187 (275)
T ss_dssp CCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCT
T ss_pred CccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCchhhceeEEeCcee
Confidence 111 11223322 34455556555788999999999999999999999999999999999986
Q ss_pred chhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHH-
Q 003363 707 NLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARAL- 785 (826)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l- 785 (826)
.+... .+.. .. ....... ......+|++++||+.|..++..++++++++|
T Consensus 188 ~~~~~-------------~~~~--------~~-~~~~~~~-------~~~~~~~~~~l~~G~~D~~~~~~~~~~~~~~L~ 238 (275)
T 2qm0_A 188 WWNNK-------------SVLE--------KE-ENLIIEL-------NNAKFETGVFLTVGSLEREHMVVGANELSERLL 238 (275)
T ss_dssp THHHH-------------GGGG--------GT-THHHHHH-------HTCSSCEEEEEEEETTSCHHHHHHHHHHHHHHH
T ss_pred eeChH-------------HHHH--------HH-HHHHhhh-------cccCCCceEEEEeCCcccchhhHHHHHHHHHHH
Confidence 43211 0000 00 0000000 02345689999999999999999999999999
Q ss_pred --HhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 003363 786 --REKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 821 (826)
Q Consensus 786 --~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~ 821 (826)
+..|+++++.++|+++|+.. ....+...+.||
T Consensus 239 ~~~~~g~~~~~~~~~g~~H~~~----~~~~l~~~l~~l 272 (275)
T 2qm0_A 239 QVNHDKLKFKFYEAEGENHASV----VPTSLSKGLRFI 272 (275)
T ss_dssp HCCCTTEEEEEEEETTCCTTTH----HHHHHHHHHHHH
T ss_pred hcccCCceEEEEECCCCCcccc----HHHHHHHHHHHH
Confidence 56788999999999999643 223445566665
No 156
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.71 E-value=6.9e-17 Score=169.82 Aligned_cols=231 Identities=17% Similarity=0.189 Sum_probs=139.7
Q ss_pred CC-eeEEEEEEecCCCCCCCCCcEEEEEcCCC-CCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCc
Q 003363 572 AQ-KPFEAIFVSSSHKKDCSCDPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (826)
Q Consensus 572 ~g-~~l~~~~~~P~~~~~~~~~P~vv~~HGg~-~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~ 649 (826)
+| ..++....- .++.|.||++||.+ +......|...+..|++. |.|+++|+||. |.+.. +.. ..
T Consensus 21 ~g~~~l~y~~~G------~g~~~~vvllHG~~pg~~~~~~w~~~~~~L~~~-~~via~Dl~G~---G~S~~---~~~-~~ 86 (291)
T 2wue_A 21 DGPLKLHYHEAG------VGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGY---GHSDK---RAE-HG 86 (291)
T ss_dssp SSEEEEEEEEEC------TTCSSEEEEECCCCTTCCHHHHTTTTHHHHTTT-SEEEEECCTTS---TTSCC---CSC-CS
T ss_pred CCcEEEEEEecC------CCCCCcEEEECCCCCccchHHHHHHHHHHHHhc-CEEEEECCCCC---CCCCC---CCC-CC
Confidence 56 666654432 23346899999963 322234566677778665 99999999994 44321 111 12
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccC--C----------CC
Q 003363 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT--T----------DI 717 (826)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~--~----------~~ 717 (826)
..++++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.+|.......... . ..
T Consensus 87 ~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
T 2wue_A 87 QFNRYAAMALKGLFDQ--LGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVA 164 (291)
T ss_dssp SHHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHS
T ss_pred cCHHHHHHHHHHHHHH--hCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhcc
Confidence 3466666555555554 23478999999999999999999999999999999875421000000 0 00
Q ss_pred CCchhhhhccCcCC---ccC---------CCCCChhhHHHHhh-----cC-----cc--cccCCCCCcEEEEEeCCCCCC
Q 003363 718 PDWCYVESYGSKGK---DSF---------TESPSVEDLTRFHS-----KS-----PI--SHISKVKTPTIFLLGAQDLRV 773 (826)
Q Consensus 718 ~~~~~~~~~~~~~~---~~~---------~~~~~~~~~~~~~~-----~s-----p~--~~~~~i~~PvLii~G~~D~~v 773 (826)
+.+.....+..... ... ...........+.. .+ .. ..+.++++|+|+++|++|..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~ 244 (291)
T 2wue_A 165 PTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRLRQPVLLIWGREDRVN 244 (291)
T ss_dssp CCHHHHHHHHHTSCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGCCSCEEEEEETTCSSS
T ss_pred CCHHHHHHHHHHhccCcccCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhCCCCeEEEecCCCCCC
Confidence 00000000000000 000 00000000001100 00 11 456788999999999999999
Q ss_pred CcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 774 PVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 774 p~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
|++.+..+.+.+.. .++++++++||...... ..++.+.+.+||++
T Consensus 245 ~~~~~~~~~~~~p~----~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 289 (291)
T 2wue_A 245 PLDGALVALKTIPR----AQLHVFGQCGHWVQVEK-FDEFNKLTIEFLGG 289 (291)
T ss_dssp CGGGGHHHHHHSTT----EEEEEESSCCSCHHHHT-HHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHCCC----CeEEEeCCCCCChhhhC-HHHHHHHHHHHHhc
Confidence 99988888777653 79999999999865433 44778888888864
No 157
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.71 E-value=5.7e-17 Score=169.13 Aligned_cols=213 Identities=17% Similarity=0.217 Sum_probs=131.0
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCc
Q 003363 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 672 (826)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 672 (826)
|.||++||.+.. ...|...+..|+++||.|+++|+||.+. +... ......+++.+.+..+++. ++.++
T Consensus 24 ~pvvllHG~~~~--~~~~~~~~~~L~~~g~~vi~~D~~G~G~---S~~~-----~~~~~~~~~~~dl~~~l~~--l~~~~ 91 (279)
T 1hkh_A 24 QPVVLIHGYPLD--GHSWERQTRELLAQGYRVITYDRRGFGG---SSKV-----NTGYDYDTFAADLHTVLET--LDLRD 91 (279)
T ss_dssp EEEEEECCTTCC--GGGGHHHHHHHHHTTEEEEEECCTTSTT---SCCC-----SSCCSHHHHHHHHHHHHHH--HTCCS
T ss_pred CcEEEEcCCCch--hhHHhhhHHHHHhCCcEEEEeCCCCCCC---CCCC-----CCCCCHHHHHHHHHHHHHh--cCCCc
Confidence 459999997654 5578888999999999999999999544 3211 1122344444444444443 24578
Q ss_pred EEEEEecchHHHHHHHHHhCCC-ceeEEEecCCccchhhhccC-CC-CCCchh--------------hhhccCcCCcc--
Q 003363 673 VTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALMVGT-TD-IPDWCY--------------VESYGSKGKDS-- 733 (826)
Q Consensus 673 v~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~p~~~~~~~~~~-~~-~~~~~~--------------~~~~~~~~~~~-- 733 (826)
+.|+||||||.+++.++.++|+ +++++|+.++.......... .. .+.... ...+.......
T Consensus 92 ~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (279)
T 1hkh_A 92 VVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRDDNPEGVPQEVFDGIEAAAKGDRFAWFTDFYKNFYNLDE 171 (279)
T ss_dssp EEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHH
T ss_pred eEEEEeChhHHHHHHHHHHcCccceeeEEEEccCCcccccCcCCcCCCcHHHHHHHHHHhhhhhhhhHHHHHhhhhhccc
Confidence 9999999999999999999998 99999999874321100000 00 000000 00000000000
Q ss_pred -CCCCCChhhHHHHh------------------hcCcccccCCC---CCcEEEEEeCCCCCCCcHHH-HHHHHHHHhCCC
Q 003363 734 -FTESPSVEDLTRFH------------------SKSPISHISKV---KTPTIFLLGAQDLRVPVSNG-LQYARALREKGV 790 (826)
Q Consensus 734 -~~~~~~~~~~~~~~------------------~~sp~~~~~~i---~~PvLii~G~~D~~vp~~~~-~~~~~~l~~~g~ 790 (826)
.......+....+. ..+....+.++ ++|+|+++|++|..+|++.+ ..+.+.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~P~lii~G~~D~~~~~~~~~~~~~~~~~---- 247 (279)
T 1hkh_A 172 NLGSRISEQAVTGSWNVAIGSAPVAAYAVVPAWIEDFRSDVEAVRAAGKPTLILHGTKDNILPIDATARRFHQAVP---- 247 (279)
T ss_dssp HBTTTBCHHHHHHHHHHHHTSCTTHHHHTHHHHTCBCHHHHHHHHHHCCCEEEEEETTCSSSCTTTTHHHHHHHCT----
T ss_pred CCcccccHHHHHhhhhhhccCcHHHHHHHHHHHhhchhhhHHHhccCCCCEEEEEcCCCccCChHHHHHHHHHhCC----
Confidence 00000111111000 11112235567 89999999999999998877 66766654
Q ss_pred CEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 003363 791 ETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 791 ~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~ 822 (826)
..++++++++||.+... ...++.+.+.+||+
T Consensus 248 ~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 278 (279)
T 1hkh_A 248 EADYVEVEGAPHGLLWT-HADEVNAALKTFLA 278 (279)
T ss_dssp TSEEEEETTCCTTHHHH-THHHHHHHHHHHHH
T ss_pred CeeEEEeCCCCccchhc-CHHHHHHHHHHHhh
Confidence 37899999999987543 34578888888885
No 158
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.71 E-value=3.9e-16 Score=164.11 Aligned_cols=190 Identities=13% Similarity=0.027 Sum_probs=129.0
Q ss_pred eEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC-----ccchHHHHHHHHCC----cEEEEECCCCCCCCchhhhhcCCC
Q 003363 575 PFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL-----SSYSKSLAFLSSVG----YSLLIVNYRGSLGFGEEALQSLPG 645 (826)
Q Consensus 575 ~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~-----~~~~~~~~~la~~G----~~Vl~~d~rG~~g~G~~~~~~~~~ 645 (826)
.+.+++|.|++++..+++|+||++||++..... ..+...+..|+++| |+|+.+|++|..+.+..
T Consensus 52 ~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~~~~~~~~------- 124 (297)
T 1gkl_A 52 TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNGGNCTAQN------- 124 (297)
T ss_dssp EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCSTTCCTTT-------
T ss_pred EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcCCccchHH-------
Confidence 889999999988767889999999998754321 12334566777764 99999999874322111
Q ss_pred CCCcchHHHHHHHHHHHHHcCC------------CCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhcc
Q 003363 646 KVGSQDVNDVLTAIDHVIDMGL------------ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG 713 (826)
Q Consensus 646 ~~~~~~~~D~~~~i~~l~~~~~------------~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~ 713 (826)
+.....+| ++.++.+... .|+++++|+|+||||++++.++.++|++|+++++.+|...+...
T Consensus 125 -~~~~~~~~---l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~sg~~~~~~~-- 198 (297)
T 1gkl_A 125 -FYQEFRQN---VIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPLSGDYWYGNS-- 198 (297)
T ss_dssp -HHHHHHHT---HHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEESCCCCBSSS--
T ss_pred -HHHHHHHH---HHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEeccccccCCc--
Confidence 11111233 3444444422 26678999999999999999999999999999999986532100
Q ss_pred CCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCC----
Q 003363 714 TTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG---- 789 (826)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g---- 789 (826)
+. ........+... ..+.....++++.+|+.|..+ .+++++.++|+++|
T Consensus 199 -------------~~---------~~~~~~~~~~~~---~~~~~~~~~l~~~~G~~D~~~--~~~~~l~~~L~~~g~~~~ 251 (297)
T 1gkl_A 199 -------------PQ---------DKANSIAEAINR---SGLSKREYFVFAATGSEDIAY--ANMNPQIEAMKALPHFDY 251 (297)
T ss_dssp -------------HH---------HHHHHHHHHHHH---HTCCTTSCEEEEEEETTCTTH--HHHHHHHHHHHTSTTCCB
T ss_pred -------------cc---------hhhhHHHHHHhh---ccCCcCcEEEEEEeCCCcccc--hhHHHHHHHHHHcCCccc
Confidence 00 000111111111 112233466777899999764 68889999999998
Q ss_pred ------CCEEEEEeCCCCCCC
Q 003363 790 ------VETKVIVFPNDVHGI 804 (826)
Q Consensus 790 ------~~~~~~~~p~~~H~~ 804 (826)
+++++.++||++|.+
T Consensus 252 ~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 252 TSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp BSCTTTCCEEEEEETTCCSSH
T ss_pred cccccCCceEEEECCCCCcCH
Confidence 699999999999975
No 159
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.71 E-value=5.3e-17 Score=159.48 Aligned_cols=181 Identities=14% Similarity=0.062 Sum_probs=123.7
Q ss_pred CCcEEEEEcCCCCCCC-CccchH-HHHHHHHC-CcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCC
Q 003363 591 CDPLIVVLHGGPHSVS-LSSYSK-SLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 667 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~-~~~~~~-~~~~la~~-G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 667 (826)
+.|+||++||++.... ...|.. ....|+++ ||.|+++|+||... .++...++.+++.-.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~------------------~~~~~~~~~~~~~l~ 64 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT------------------ARESIWLPFMETELH 64 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT------------------CCHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc------------------ccHHHHHHHHHHHhC
Confidence 4689999999776532 234544 67788877 99999999998321 122334444455422
Q ss_pred CCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHh
Q 003363 668 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFH 747 (826)
Q Consensus 668 ~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (826)
+ .+++.|+|||+||.+++.++.++| ++++|+.+|...... .. .... ..+...+.
T Consensus 65 ~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~--------~~--~~~~-----~~~~~~~~-------- 118 (194)
T 2qs9_A 65 C-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLG--------DE--NERA-----SGYFTRPW-------- 118 (194)
T ss_dssp C-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTT--------CH--HHHH-----TSTTSSCC--------
T ss_pred c-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccc--------hh--hhHH-----Hhhhcccc--------
Confidence 2 278999999999999999999998 999999988653210 00 0000 00000110
Q ss_pred hcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 748 SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 748 ~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
....+.++.+|+|+++|++|..+|++.+..+.+.+ . .+++++++++|.+.... . +.+..+++||++..
T Consensus 119 ---~~~~~~~~~~p~lii~G~~D~~vp~~~~~~~~~~~-~----~~~~~~~~~gH~~~~~~-p-~~~~~~~~fl~~~~ 186 (194)
T 2qs9_A 119 ---QWEKIKANCPYIVQFGSTDDPFLPWKEQQEVADRL-E----TKLHKFTDCGHFQNTEF-H-ELITVVKSLLKVPA 186 (194)
T ss_dssp ---CHHHHHHHCSEEEEEEETTCSSSCHHHHHHHHHHH-T----CEEEEESSCTTSCSSCC-H-HHHHHHHHHHTCCC
T ss_pred ---cHHHHHhhCCCEEEEEeCCCCcCCHHHHHHHHHhc-C----CeEEEeCCCCCccchhC-H-HHHHHHHHHHHhhh
Confidence 01122334679999999999999999999998888 3 58999999999876433 3 56677789998653
No 160
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.71 E-value=6.9e-17 Score=169.44 Aligned_cols=216 Identities=15% Similarity=0.181 Sum_probs=138.2
Q ss_pred CCcEEEEEcCCCCCCCCccch-HHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~-~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (826)
+.|+||++||.+.. ...|. ..+..|+++||.|+++|+|| +|.+.. + .....+++.+.+..+++. ++
T Consensus 42 ~~~~vv~lHG~~~~--~~~~~~~~~~~l~~~g~~vi~~D~~G---~G~s~~---~---~~~~~~~~~~~~~~~l~~--l~ 108 (293)
T 3hss_A 42 TGDPVVFIAGRGGA--GRTWHPHQVPAFLAAGYRCITFDNRG---IGATEN---A---EGFTTQTMVADTAALIET--LD 108 (293)
T ss_dssp SSEEEEEECCTTCC--GGGGTTTTHHHHHHTTEEEEEECCTT---SGGGTT---C---CSCCHHHHHHHHHHHHHH--HT
T ss_pred CCCEEEEECCCCCc--hhhcchhhhhhHhhcCCeEEEEccCC---CCCCCC---c---ccCCHHHHHHHHHHHHHh--cC
Confidence 45889999997755 44566 56788889999999999999 454421 1 123455555555555554 24
Q ss_pred CCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhcc------------CCCCC-Cchhh----hhccCcC--
Q 003363 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG------------TTDIP-DWCYV----ESYGSKG-- 730 (826)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~------------~~~~~-~~~~~----~~~~~~~-- 730 (826)
.+++.|+|||+||.+++.++.++|++++++|+.+|......... ....+ .+... ..+....
T Consensus 109 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (293)
T 3hss_A 109 IAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLN 188 (293)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHHT
T ss_pred CCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhccccccc
Confidence 57899999999999999999999999999999998653211100 00000 00000 0000000
Q ss_pred -----------CccCCCCCChhhHHH---HhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEE
Q 003363 731 -----------KDSFTESPSVEDLTR---FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 796 (826)
Q Consensus 731 -----------~~~~~~~~~~~~~~~---~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 796 (826)
............... ....+....+.++++|+|+++|++|..+|++.+..+.+.+++ +++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~----~~~~~ 264 (293)
T 3hss_A 189 DDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPN----GRYLQ 264 (293)
T ss_dssp CHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHSTT----EEEEE
T ss_pred ccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHHCCC----ceEEE
Confidence 000000000000000 011222345678899999999999999999998888887754 79999
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 797 FPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 797 ~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
++++||..... ...++.+.|.+||++.
T Consensus 265 ~~~~gH~~~~~-~p~~~~~~i~~fl~~~ 291 (293)
T 3hss_A 265 IPDAGHLGFFE-RPEAVNTAMLKFFASV 291 (293)
T ss_dssp ETTCCTTHHHH-SHHHHHHHHHHHHHTC
T ss_pred eCCCcchHhhh-CHHHHHHHHHHHHHhc
Confidence 99999986543 3457888899998763
No 161
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.71 E-value=5.9e-17 Score=178.34 Aligned_cols=133 Identities=17% Similarity=0.117 Sum_probs=93.0
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC---------ccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhc
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL---------SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQS 642 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~---------~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~ 642 (826)
....+.++++.|.+..+.+++|+||++||++..... ..+...+..|+++||.|+++|+||.++++...
T Consensus 59 ~~~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~~V~~~D~~G~G~s~~~~--- 135 (397)
T 3h2g_A 59 EPATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPLVTRLASQGYVVVGSDYLGLGKSNYAY--- 135 (397)
T ss_dssp CEEEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHHHHTTGGGTCEEEEECCTTSTTCCCSS---
T ss_pred CeEEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHHHHHHHHCCCEEEEecCCCCCCCCCCc---
Confidence 335689999999876556789999999997765322 12556778889999999999999966543211
Q ss_pred CCCCCC-----cchHHHHHHHHHHHHHc-CCCCCCcEEEEEecchHHHHHHHHHh-CC----C-ceeEEEecCCccchh
Q 003363 643 LPGKVG-----SQDVNDVLTAIDHVIDM-GLANPSKVTVVGGSHGGFLTTHLIGQ-AP----D-KFVAAAARNPLCNLA 709 (826)
Q Consensus 643 ~~~~~~-----~~~~~D~~~~i~~l~~~-~~~d~~rv~l~G~S~GG~~a~~~a~~-~p----~-~~~a~v~~~p~~~~~ 709 (826)
..+. ...+.|...++..+.++ +..|+++|+|+|||+||++++.++.. .+ + .+.+++..++..++.
T Consensus 136 --~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (397)
T 3h2g_A 136 --HPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVASAPISGPYALE 212 (397)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEEEEESCCSSHH
T ss_pred --cchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEEecccccccHH
Confidence 1111 12355566666666554 33346899999999999999887632 22 2 578888888877764
No 162
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.71 E-value=5.9e-17 Score=177.62 Aligned_cols=140 Identities=10% Similarity=0.024 Sum_probs=103.4
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCC------------ccch----HHHHHHHHCCcEEEEECCC
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSL------------SSYS----KSLAFLSSVGYSLLIVNYR 630 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~------------~~~~----~~~~~la~~G~~Vl~~d~r 630 (826)
.+...+|..+.++++.|++. .++.|+||++||.+..... ..|. ..++.|+++||+|+++|+|
T Consensus 91 ~~~~~~g~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G~~Vl~~D~r 168 (391)
T 3g8y_A 91 EFYPFPKSVSTFLVLKPEHL--KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEGYVAVAVDNA 168 (391)
T ss_dssp EECCSTTCCEEEEEEEETTC--CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTTCEEEECCCT
T ss_pred EEEcCCCCEEEEEEEeCCCC--CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCCCEEEEecCC
Confidence 45566788999999999842 5789999999996543210 0112 5678999999999999999
Q ss_pred CCCCCchhhhhcC----------------CCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCC
Q 003363 631 GSLGFGEEALQSL----------------PGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD 694 (826)
Q Consensus 631 G~~g~G~~~~~~~----------------~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~ 694 (826)
|.++.+....... ...+....+.|+.++++++.+++.+|++||+|+|||+||++++.+++. ++
T Consensus 169 g~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~-~~ 247 (391)
T 3g8y_A 169 AAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVL-DK 247 (391)
T ss_dssp TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHH-CT
T ss_pred CccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHc-CC
Confidence 9665443211000 001111224799999999999988999999999999999999988886 56
Q ss_pred ceeEEEecCCccchh
Q 003363 695 KFVAAAARNPLCNLA 709 (826)
Q Consensus 695 ~~~a~v~~~p~~~~~ 709 (826)
+++++|+.++++.+.
T Consensus 248 ~i~a~v~~~~~~~~~ 262 (391)
T 3g8y_A 248 DIYAFVYNDFLCQTQ 262 (391)
T ss_dssp TCCEEEEESCBCCHH
T ss_pred ceeEEEEccCCCCcc
Confidence 799999888877664
No 163
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.70 E-value=1.1e-16 Score=162.49 Aligned_cols=207 Identities=12% Similarity=0.180 Sum_probs=131.1
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHH------
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVI------ 663 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~------ 663 (826)
++.|+||++||.+.. ...|. .+..|+ +||.|+++|+||.+... .......++..+.+..++
T Consensus 14 ~~~~~vv~~hG~~~~--~~~~~-~~~~l~-~g~~v~~~d~~g~g~s~---------~~~~~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 3e0x_A 14 KSPNTLLFVHGSGCN--LKIFG-ELEKYL-EDYNCILLDLKGHGESK---------GQCPSTVYGYIDNVANFITNSEVT 80 (245)
T ss_dssp TCSCEEEEECCTTCC--GGGGT-TGGGGC-TTSEEEEECCTTSTTCC---------SCCCSSHHHHHHHHHHHHHHCTTT
T ss_pred CCCCEEEEEeCCccc--HHHHH-HHHHHH-hCCEEEEecCCCCCCCC---------CCCCcCHHHHHHHHHHHHHhhhhH
Confidence 356899999997655 34555 555565 89999999999954432 111224555555555555
Q ss_pred HcCCCCCCcEEEEEecchHHHHHHHHHh-CCCceeEEEecCCccchhhhc-------cCCCCCCchhhhhccCc------
Q 003363 664 DMGLANPSKVTVVGGSHGGFLTTHLIGQ-APDKFVAAAARNPLCNLALMV-------GTTDIPDWCYVESYGSK------ 729 (826)
Q Consensus 664 ~~~~~d~~rv~l~G~S~GG~~a~~~a~~-~p~~~~a~v~~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~------ 729 (826)
+. ++ ++.|+|||+||.+++.++.+ +|+ ++++|+.+|........ ..... ...+.......
T Consensus 81 ~~--~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 154 (245)
T 3e0x_A 81 KH--QK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQL-DNNYLLECIGGIDNPLS 154 (245)
T ss_dssp TT--CS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCC-CHHHHHHHHTCSCSHHH
T ss_pred hh--cC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHH-HhhcCcccccccchHHH
Confidence 33 33 89999999999999999999 999 99999999976541100 00000 00000000000
Q ss_pred --CCccCCCCCC--hhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCC
Q 003363 730 --GKDSFTESPS--VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 805 (826)
Q Consensus 730 --~~~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~ 805 (826)
....+...+. ..........+....+.++++|+|+++|++|..+|++.+..+++.+++ ++++++++++|.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~ 230 (245)
T 3e0x_A 155 EKYFETLEKDPDIMINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTLVEYSEIIKKEVEN----SELKIFETGKHFLL 230 (245)
T ss_dssp HHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGCCSCEEEEEETTCSSSCHHHHHHHHHHSSS----EEEEEESSCGGGHH
T ss_pred HHHHHHHhcCcHHHHHHHHHhccccHHHHHHhCCCCEEEEEeCCCCCCCHHHHHHHHHHcCC----ceEEEeCCCCcceE
Confidence 0000011000 011122233455566788999999999999999999999888887753 79999999999865
Q ss_pred CCCCHHHHHHHHHHH
Q 003363 806 RPQSDFESFLNIGLW 820 (826)
Q Consensus 806 ~~~~~~~~~~~i~~w 820 (826)
.. ...++.+.+.+|
T Consensus 231 ~~-~~~~~~~~i~~f 244 (245)
T 3e0x_A 231 VV-NAKGVAEEIKNF 244 (245)
T ss_dssp HH-THHHHHHHHHTT
T ss_pred Ee-cHHHHHHHHHhh
Confidence 33 333555555555
No 164
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.70 E-value=6.3e-17 Score=166.51 Aligned_cols=215 Identities=16% Similarity=0.139 Sum_probs=129.2
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
..|.||++||.+.+ ...|...+..|++. |.|+++|+||. |.+... . ...++++.+.+..+++. ++.
T Consensus 15 ~~~~vvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G~---G~S~~~---~---~~~~~~~a~dl~~~l~~--l~~ 80 (255)
T 3bf7_A 15 NNSPIVLVHGLFGS--LDNLGVLARDLVND-HNIIQVDVRNH---GLSPRE---P---VMNYPAMAQDLVDTLDA--LQI 80 (255)
T ss_dssp CCCCEEEECCTTCC--TTTTHHHHHHHTTT-SCEEEECCTTS---TTSCCC---S---CCCHHHHHHHHHHHHHH--HTC
T ss_pred CCCCEEEEcCCccc--HhHHHHHHHHHHhh-CcEEEecCCCC---CCCCCC---C---CcCHHHHHHHHHHHHHH--cCC
Confidence 34779999997755 45688888888765 99999999994 443211 1 12334444333333333 234
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCc--cch----hhhc----c--CCCCCCchhhhhccCcCC-------
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL--CNL----ALMV----G--TTDIPDWCYVESYGSKGK------- 731 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~--~~~----~~~~----~--~~~~~~~~~~~~~~~~~~------- 731 (826)
+++.|+||||||.+++.++.++|++++++|+.++. ... .... . ..................
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (255)
T 3bf7_A 81 DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ 160 (255)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHHH
T ss_pred CCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHHH
Confidence 68999999999999999999999999999987532 110 0000 0 000000000000000000
Q ss_pred ---ccCC---CCCChhhH-HHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCC
Q 003363 732 ---DSFT---ESPSVEDL-TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGI 804 (826)
Q Consensus 732 ---~~~~---~~~~~~~~-~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~ 804 (826)
..+. ........ ..+........+.++++|+|+++|++|..++++.+..+.+.+. ..+++++|++||.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~ 236 (255)
T 3bf7_A 161 FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVSEQYRDDLLAQFP----QARAHVIAGAGHWV 236 (255)
T ss_dssp HHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCCCSCEEEECBTTCSTTCGGGHHHHHHHCT----TEEECCBTTCCSCH
T ss_pred HHHHhccCCceeecHHHHHhhhhhccccccccccCCCeEEEECCCCCCCCHHHHHHHHHHCC----CCeEEEeCCCCCcc
Confidence 0000 00000000 0010000012356789999999999999999988877776654 38999999999986
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 003363 805 ERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 805 ~~~~~~~~~~~~i~~w~~~~ 824 (826)
.... ...+.+.+.+|+.+|
T Consensus 237 ~~e~-p~~~~~~i~~fl~~~ 255 (255)
T 3bf7_A 237 HAEK-PDAVLRAIRRYLNDH 255 (255)
T ss_dssp HHHC-HHHHHHHHHHHHHTC
T ss_pred ccCC-HHHHHHHHHHHHhcC
Confidence 5444 357888999999865
No 165
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.70 E-value=2.9e-16 Score=165.33 Aligned_cols=234 Identities=11% Similarity=0.122 Sum_probs=136.5
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCc
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~ 649 (826)
..+|..++..... +.|+||++||.+.. ...|...+..|++ ||.|+++|+||.+. +...........
T Consensus 19 ~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~~-~~~v~~~D~~G~G~---S~~~~~~~~~~~ 84 (306)
T 3r40_A 19 NTSSGRIFARVGG--------DGPPLLLLHGFPQT--HVMWHRVAPKLAE-RFKVIVADLPGYGW---SDMPESDEQHTP 84 (306)
T ss_dssp CCTTCCEEEEEEE--------CSSEEEEECCTTCC--GGGGGGTHHHHHT-TSEEEEECCTTSTT---SCCCCCCTTCGG
T ss_pred EeCCEEEEEEEcC--------CCCeEEEECCCCCC--HHHHHHHHHHhcc-CCeEEEeCCCCCCC---CCCCCCCcccCC
Confidence 3456667655432 34789999998765 4567778888887 99999999999543 321111111113
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCC--------------
Q 003363 650 QDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT-------------- 715 (826)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~-------------- 715 (826)
...+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|...........
T Consensus 85 ~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (306)
T 3r40_A 85 YTKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYALKIYHWSFLA 162 (306)
T ss_dssp GSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCHHHHHHHCSHHHHHHSTHHHHHT
T ss_pred CCHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCCCCccchhhhhhhhhhhhHHHHHhh
Confidence 4566766666666665 345789999999999999999999999999999999754321110000
Q ss_pred CC---C-------CchhhhhccCcCCcc-CCCCCChhhHHHHhh--cC------------------------cccccCCC
Q 003363 716 DI---P-------DWCYVESYGSKGKDS-FTESPSVEDLTRFHS--KS------------------------PISHISKV 758 (826)
Q Consensus 716 ~~---~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~s------------------------p~~~~~~i 758 (826)
.. . ...+...+....... .......+..+.+.. .. ....+.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i 242 (306)
T 3r40_A 163 QPAPLPENLLGGDPDFYVKAKLASWTRAGDLSAFDPRAVEHYRIAFADPMRRHVMCEDYRAGAYADFEHDKIDVEAGNKI 242 (306)
T ss_dssp SCTTHHHHHHTSCHHHHHHHHHHHTSSSSSSTTSCHHHHHHHHHHHTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCB
T ss_pred cccchHHHHHcCCHHHHHHHHhhcccCCCccccCCHHHHHHHHHHHccCCCcchhhHHHHhcccccchhhhhhhhhccCC
Confidence 00 0 000000000000000 000011111111110 00 00135788
Q ss_pred CCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 759 KTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 759 ~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
++|+|+++|++|..+|.....+..+.+.. .++++++ ++||..... ...++.+.|.+||++.
T Consensus 243 ~~P~lii~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~-~~gH~~~~e-~p~~~~~~i~~fl~~~ 303 (306)
T 3r40_A 243 PVPMLALWGASGIAQSAATPLDVWRKWAS---DVQGAPI-ESGHFLPEE-APDQTAEALVRFFSAA 303 (306)
T ss_dssp CSCEEEEEETTCC------CHHHHHHHBS---SEEEEEE-SSCSCHHHH-SHHHHHHHHHHHHHC-
T ss_pred CcceEEEEecCCcccCchhHHHHHHhhcC---CCeEEEe-cCCcCchhh-ChHHHHHHHHHHHHhc
Confidence 99999999999999986555555555433 4788888 689976543 4457889999999864
No 166
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.70 E-value=1.3e-16 Score=167.55 Aligned_cols=214 Identities=14% Similarity=0.193 Sum_probs=132.8
Q ss_pred cEEEEEcCCC-CCCCCccchHHH-HHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 593 PLIVVLHGGP-HSVSLSSYSKSL-AFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 593 P~vv~~HGg~-~~~~~~~~~~~~-~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
|.||++||.+ .......|...+ ..|++ +|.|+++|+||.| .+.. +. ......+++.+.+..+++. ++.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G---~S~~---~~-~~~~~~~~~~~~l~~~l~~--l~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVEA-GYRVILLDCPGWG---KSDS---VV-NSGSRSDLNARILKSVVDQ--LDI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHHT-TCEEEEECCTTST---TSCC---CC-CSSCHHHHHHHHHHHHHHH--TTC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHhc-CCeEEEEcCCCCC---CCCC---CC-ccccCHHHHHHHHHHHHHH--hCC
Confidence 3899999964 222233565566 66765 4999999999954 3321 11 1134566766666666665 345
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCC------------CCCchhhhhccCcCCccCCCC-
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD------------IPDWCYVESYGSKGKDSFTES- 737 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~- 737 (826)
+++.|+||||||.+++.++.++|++++++|+.+|............ .+.+.....+.... .+...
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 184 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIF--VFDTSD 184 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTT--SSCTTS
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHh--hcCccc
Confidence 7899999999999999999999999999999887542110000000 00000000000000 00000
Q ss_pred CChh--------------hHHHHh---------hcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEE
Q 003363 738 PSVE--------------DLTRFH---------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 794 (826)
Q Consensus 738 ~~~~--------------~~~~~~---------~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 794 (826)
...+ ....+. ..+....+.++++|+|+++|++|..+|++.+.++.+.+.. .++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~----~~~ 260 (289)
T 1u2e_A 185 LTDALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRLLSGIAG----SEL 260 (289)
T ss_dssp CCHHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGCCSCEEEEEETTCSSSCTHHHHHHHHHSTT----CEE
T ss_pred CCHHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhcCCCeEEEeeCCCCccCHHHHHHHHhhCCC----cEE
Confidence 0000 000000 0112245678899999999999999999999888887754 689
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 795 IVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 795 ~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
++++++||...... ..++.+.+.+||++
T Consensus 261 ~~i~~~gH~~~~e~-p~~~~~~i~~fl~~ 288 (289)
T 1u2e_A 261 HIFRDCGHWAQWEH-ADAFNQLVLNFLAR 288 (289)
T ss_dssp EEESSCCSCHHHHT-HHHHHHHHHHHHTC
T ss_pred EEeCCCCCchhhcC-HHHHHHHHHHHhcC
Confidence 99999999865433 44777888888863
No 167
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.70 E-value=2.6e-16 Score=165.78 Aligned_cols=217 Identities=14% Similarity=0.087 Sum_probs=133.2
Q ss_pred CcEEEEEcCCC-CCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 592 DPLIVVLHGGP-HSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 592 ~P~vv~~HGg~-~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
.|.||++||.+ .......|...+..|++. |.|+++|+||.| .+. . . .....+++..+.+..+++. +..
T Consensus 36 g~~vvllHG~~~~~~~~~~~~~~~~~L~~~-~~vi~~Dl~G~G---~S~-~---~-~~~~~~~~~~~dl~~~l~~--l~~ 104 (296)
T 1j1i_A 36 GQPVILIHGGGAGAESEGNWRNVIPILARH-YRVIAMDMLGFG---KTA-K---P-DIEYTQDRRIRHLHDFIKA--MNF 104 (296)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHTTT-SEEEEECCTTST---TSC-C---C-SSCCCHHHHHHHHHHHHHH--SCC
T ss_pred CCeEEEECCCCCCcchHHHHHHHHHHHhhc-CEEEEECCCCCC---CCC-C---C-CCCCCHHHHHHHHHHHHHh--cCC
Confidence 36799999964 222234566667777655 999999999954 432 1 1 1123455555555555554 233
Q ss_pred -CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhcc-CCC----CCCchhhhhccCcCCccCCCCCChhh--
Q 003363 671 -SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-TTD----IPDWCYVESYGSKGKDSFTESPSVED-- 742 (826)
Q Consensus 671 -~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-- 742 (826)
+++.|+||||||.+++.++.++|++++++|+.+|......... ... .+.+............. ......+.
T Consensus 105 ~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 183 (296)
T 1j1i_A 105 DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREGMVHLVKALTND-GFKIDDAMIN 183 (296)
T ss_dssp SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHHHHHHHHHHSCT-TCCCCHHHHH
T ss_pred CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchHHHHHHHHhccC-cccccHHHHH
Confidence 6899999999999999999999999999999987542110000 000 00000000000000000 00000000
Q ss_pred -----------HHHHh-----------hcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 003363 743 -----------LTRFH-----------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 800 (826)
Q Consensus 743 -----------~~~~~-----------~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~ 800 (826)
...+. .......+.++++|+|+++|++|..+|++.+..+.+.+.. .++++++++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~Lii~G~~D~~~~~~~~~~~~~~~~~----~~~~~i~~~ 259 (296)
T 1j1i_A 184 SRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKVQVPTLVVQGKDDKVVPVETAYKFLDLIDD----SWGYIIPHC 259 (296)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTCCSCEEEEEETTCSSSCHHHHHHHHHHCTT----EEEEEESSC
T ss_pred HHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcCCCCEEEEEECCCcccCHHHHHHHHHHCCC----CEEEEECCC
Confidence 00000 0112234678999999999999999999998888877653 789999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 801 VHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 801 ~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
||...... ..++.+.+.+||.+++
T Consensus 260 gH~~~~e~-p~~~~~~i~~fl~~~~ 283 (296)
T 1j1i_A 260 GHWAMIEH-PEDFANATLSFLSLRV 283 (296)
T ss_dssp CSCHHHHS-HHHHHHHHHHHHHHC-
T ss_pred CCCchhcC-HHHHHHHHHHHHhccC
Confidence 99865433 4578889999998754
No 168
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.69 E-value=1.9e-16 Score=172.98 Aligned_cols=246 Identities=13% Similarity=0.117 Sum_probs=147.3
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-------cchHHHH---HHHHCCcEEEEECCCC-CCCCchhhh
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-------SYSKSLA---FLSSVGYSLLIVNYRG-SLGFGEEAL 640 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-------~~~~~~~---~la~~G~~Vl~~d~rG-~~g~G~~~~ 640 (826)
+|..++...+.++ ...+.|+||++||.+...... .|...+. .|++.||.|+++|+|| .++......
T Consensus 42 ~g~~l~y~~~g~~---~~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~ 118 (377)
T 2b61_A 42 SYINVAYQTYGTL---NDEKNNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSS 118 (377)
T ss_dssp CSEEEEEEEESCC---CTTCCCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTS
T ss_pred cceeEEEEecccc---cccCCCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcc
Confidence 3555655544332 223358999999977653220 0554443 3667899999999999 444322110
Q ss_pred hcCC-------CCCCcchHHHHHHHHHHHHHcCCCCCCcEE-EEEecchHHHHHHHHHhCCCceeEEEecCCccchhh--
Q 003363 641 QSLP-------GKVGSQDVNDVLTAIDHVIDMGLANPSKVT-VVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-- 710 (826)
Q Consensus 641 ~~~~-------~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~-l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~-- 710 (826)
..+ ..+....++|+.+.+..+++. ++.+++. |+|||+||.+++.+|.++|++++++|+.+|......
T Consensus 119 -~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 195 (377)
T 2b61_A 119 -INPQTGKPYGSQFPNIVVQDIVKVQKALLEH--LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIYFSAEA 195 (377)
T ss_dssp -BCTTTSSBCGGGCCCCCHHHHHHHHHHHHHH--TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSSCCHHH
T ss_pred -cCccccccccccCCcccHHHHHHHHHHHHHH--cCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCccccccc
Confidence 000 000124677888777777776 4557888 999999999999999999999999999998543210
Q ss_pred --hc-----cCCCCCCchh------------------------------hhhccCcCCcc--------------------
Q 003363 711 --MV-----GTTDIPDWCY------------------------------VESYGSKGKDS-------------------- 733 (826)
Q Consensus 711 --~~-----~~~~~~~~~~------------------------------~~~~~~~~~~~-------------------- 733 (826)
+. .....+.|.. ...+.......
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (377)
T 2b61_A 196 IGFNHVMRQAVINDPNFNGGDYYEGTPPDQGLSIARMLGMLTYRTDLQLAKAFGRATKSDGSFWGDYFQVESYLSYQGKK 275 (377)
T ss_dssp HHHHHHHHHHHHTSTTCGGGCCTTSCCCHHHHHHHHHHHHHHHSCHHHHHHHTTTCBCTTCCTTSCCBHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhcCccccccchhccCCCchhhhHHHHhhhhcccCHHHHHHHhccccccccccccchHHHHHHHHhhhhh
Confidence 00 0000001100 00000000000
Q ss_pred CCCCCChhhH----HHHhhcC-------cccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeC-CCC
Q 003363 734 FTESPSVEDL----TRFHSKS-------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP-NDV 801 (826)
Q Consensus 734 ~~~~~~~~~~----~~~~~~s-------p~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p-~~~ 801 (826)
+......... ..+...+ ....+.++++|+|+++|++|..+|+++..+..+.+.+....+++++++ ++|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~G~~D~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~g 355 (377)
T 2b61_A 276 FLERFDANSYLHLLRALDMYDPSLGYENVKEALSRIKARYTLVSVTTDQLFKPIDLYKSKQLLEQSGVDLHFYEFPSDYG 355 (377)
T ss_dssp HHTTCCHHHHHHHHHHHHHCCTTTTSSCHHHHHTTCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEECCTTG
T ss_pred hccccChhHHHHHHHHHhccccccccchHHhhhhhcCCCEEEEecCCcccCCccchHHHHHHHHhcCCCceEEEeCCCCC
Confidence 0000000000 0011111 134567899999999999999999966666666666655668999999 999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHH
Q 003363 802 HGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 802 H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
|...... ..++.+.|.+||+++
T Consensus 356 H~~~~e~-p~~~~~~i~~fl~~~ 377 (377)
T 2b61_A 356 HDAFLVD-YDQFEKRIRDGLAGN 377 (377)
T ss_dssp GGHHHHC-HHHHHHHHHHHHHTC
T ss_pred chhhhcC-HHHHHHHHHHHHhcC
Confidence 9876443 347888999999763
No 169
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.69 E-value=2.2e-16 Score=163.38 Aligned_cols=218 Identities=17% Similarity=0.083 Sum_probs=130.9
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (826)
+..|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+.... .....++++.+.+..+++.-. .
T Consensus 8 ~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~-------~~~~~~~~~a~dl~~~l~~l~-~ 77 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLG--AWIWYKLKPLLESAGHKVTAVDLSAAGINPRRL-------DEIHTFRDYSEPLMEVMASIP-P 77 (264)
T ss_dssp -CCCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCG-------GGCCSHHHHHHHHHHHHHHSC-T
T ss_pred CCCCeEEEECCCccc--cchHHHHHHHHHhCCCEEEEeecCCCCCCCCCc-------ccccCHHHHHHHHHHHHHHhC-C
Confidence 456789999997654 456888889999999999999999954332110 011235555555555555421 1
Q ss_pred CCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchh---------hhccCCCCCCchh--hhhcc-----------
Q 003363 670 PSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---------LMVGTTDIPDWCY--VESYG----------- 727 (826)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~---------~~~~~~~~~~~~~--~~~~~----------- 727 (826)
.+++.|+||||||.+++.++.++|++++++|+.++..... .+........|.. ...+.
T Consensus 78 ~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
T 2wfl_A 78 DEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPADMMLDSQFSTYGNPENPGMSMIL 157 (264)
T ss_dssp TCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCCCCTTSCTTHHHHHHHHHSCTTTTTTCEEEEESCTTSCEEEEEC
T ss_pred CCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeeccCCCCcchhhHHHHhhhcCcchhhhhhhhhhccCCCCCcchhhh
Confidence 3689999999999999999999999999999988642100 0000000000000 00000
Q ss_pred -CcCC-ccCCCCCChhhHHHHh-hcCcc----------ccc---CCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCC
Q 003363 728 -SKGK-DSFTESPSVEDLTRFH-SKSPI----------SHI---SKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVE 791 (826)
Q Consensus 728 -~~~~-~~~~~~~~~~~~~~~~-~~sp~----------~~~---~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~ 791 (826)
.... ..+......+...... ...+. ..+ ...++|+|+++|++|..+|++.++.+.+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~p~---- 233 (264)
T 2wfl_A 158 GPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGA---- 233 (264)
T ss_dssp CHHHHHHHTSTTSCHHHHHHHHHHCCCEECCHHHHTTSCCCCTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHHCC----
T ss_pred hHHHHHHHHhcCCCHHHHHHHHhccCCCcccccccccccccChHHhCCCCeEEEEeCCcCCCCHHHHHHHHHhCCC----
Confidence 0000 0000000111111000 00010 011 11368999999999999999998888888754
Q ss_pred EEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 003363 792 TKVIVFPNDVHGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 792 ~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~ 822 (826)
.++++++++||....+.. .++.+.+.+|+.
T Consensus 234 ~~~~~i~~~gH~~~~e~P-~~~~~~l~~f~~ 263 (264)
T 2wfl_A 234 DKVKEIKEADHMGMLSQP-REVCKCLLDISD 263 (264)
T ss_dssp SEEEEETTCCSCHHHHSH-HHHHHHHHHHHC
T ss_pred ceEEEeCCCCCchhhcCH-HHHHHHHHHHhh
Confidence 689999999998764443 477788888864
No 170
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.69 E-value=1.2e-16 Score=175.39 Aligned_cols=140 Identities=11% Similarity=0.014 Sum_probs=103.8
Q ss_pred eeccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCC------------Cccch----HHHHHHHHCCcEEEEECCC
Q 003363 567 NLTKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVS------------LSSYS----KSLAFLSSVGYSLLIVNYR 630 (826)
Q Consensus 567 ~~~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~------------~~~~~----~~~~~la~~G~~Vl~~d~r 630 (826)
.+...+|..+.++++.|++. .++.|+||++||++.... ...|. ..++.|+++||+|+++|+|
T Consensus 96 ~~~~~~g~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~Gy~Vl~~D~r 173 (398)
T 3nuz_A 96 EFYPLPKCVSTFLVLIPDNI--NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEGYIAVAVDNP 173 (398)
T ss_dssp EECCSTTBCEEEEEEEESSC--CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTTCEEEEECCT
T ss_pred EEEcCCCcEEEEEEEeCCCC--CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCCCEEEEecCC
Confidence 45566788999999999852 578999999999765321 00121 4778999999999999999
Q ss_pred CCCCCchhhhhc----------------CCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCC
Q 003363 631 GSLGFGEEALQS----------------LPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD 694 (826)
Q Consensus 631 G~~g~G~~~~~~----------------~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~ 694 (826)
|.++.+...... ....+....+.|+.+++++|.+++.+|++||+|+|||+||++++.+++. ++
T Consensus 174 G~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa~-~~ 252 (398)
T 3nuz_A 174 AAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGTL-DT 252 (398)
T ss_dssp TSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHHH-CT
T ss_pred CCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHhc-CC
Confidence 966544322100 1112222345899999999999988999999999999999999988886 45
Q ss_pred ceeEEEecCCccchh
Q 003363 695 KFVAAAARNPLCNLA 709 (826)
Q Consensus 695 ~~~a~v~~~p~~~~~ 709 (826)
+++++|+.++++.+.
T Consensus 253 ~i~a~v~~~~~~~~~ 267 (398)
T 3nuz_A 253 SIYAFVYNDFLCQTQ 267 (398)
T ss_dssp TCCEEEEESCBCCHH
T ss_pred cEEEEEEecccccch
Confidence 788888877665543
No 171
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.69 E-value=6.6e-16 Score=162.82 Aligned_cols=229 Identities=17% Similarity=0.155 Sum_probs=137.4
Q ss_pred eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHH
Q 003363 574 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 653 (826)
Q Consensus 574 ~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~ 653 (826)
..+++....|. ...|.||++||.+.. ...|...+..|+++||.|+++|+||. |.+.. +.......++
T Consensus 33 ~~l~y~~~G~~-----~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~rvia~Dl~G~---G~S~~---~~~~~~~~~~ 99 (297)
T 2xt0_A 33 LRMHYVDEGPR-----DAEHTFLCLHGEPSW--SFLYRKMLPVFTAAGGRVVAPDLFGF---GRSDK---PTDDAVYTFG 99 (297)
T ss_dssp CCEEEEEESCT-----TCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTTS---TTSCE---ESCGGGCCHH
T ss_pred eEEEEEEccCC-----CCCCeEEEECCCCCc--ceeHHHHHHHHHhCCcEEEEeCCCCC---CCCCC---CCCcccCCHH
Confidence 66765554332 114789999997754 55778888999999999999999994 44321 1111123455
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh-----------hcc-CCCCCCch
Q 003363 654 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL-----------MVG-TTDIPDWC 721 (826)
Q Consensus 654 D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~-----------~~~-~~~~~~~~ 721 (826)
++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++...... ... ........
T Consensus 100 ~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (297)
T 2xt0_A 100 FHRRSLLAFLDA--LQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLDVGK 177 (297)
T ss_dssp HHHHHHHHHHHH--HTCCSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCCCCSSSCSCHHHHHHHHHHHTCTTCCHHH
T ss_pred HHHHHHHHHHHH--hCCCCEEEEEECchHHHHHHHHHhChHHhcEEEEECCCCCcccCCchhHHHHHHHhhcccccchhH
Confidence 555555555554 2347899999999999999999999999999999887431000 000 00000000
Q ss_pred hhhhccCc----CCccCCC-CCCh---hhHHHHhhc--------------CcccccC-CCCCcEEEEEeCCCCCCCcHHH
Q 003363 722 YVESYGSK----GKDSFTE-SPSV---EDLTRFHSK--------------SPISHIS-KVKTPTIFLLGAQDLRVPVSNG 778 (826)
Q Consensus 722 ~~~~~~~~----~~~~~~~-~~~~---~~~~~~~~~--------------sp~~~~~-~i~~PvLii~G~~D~~vp~~~~ 778 (826)
........ ....+.. .... .....+... .....+. ++++|+|+++|++|..+| ..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~~D~~~~-~~~ 256 (297)
T 2xt0_A 178 LMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRFPAIVPITPDMEGAEIGRQAMSFWSTQWSGPTFMAVGAQDPVLG-PEV 256 (297)
T ss_dssp HHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHGGGGSCCSTTSTTHHHHHHHHHHHHHTCCSCEEEEEETTCSSSS-HHH
T ss_pred HHhccCccCCHHHHHHHhccccCcchhHHHHHHHHhCccccccchhhHHHHHHHHhhhccCCCeEEEEeCCCcccC-hHH
Confidence 00000000 0000000 0000 000111000 0112355 899999999999999999 778
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 003363 779 LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 779 ~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~ 822 (826)
.++.+.+... ....+.++++||.... +. .++...|.+|++
T Consensus 257 ~~~~~~~p~~--~~~~~~~~~~GH~~~~-~p-~~~~~~i~~fl~ 296 (297)
T 2xt0_A 257 MGMLRQAIRG--CPEPMIVEAGGHFVQE-HG-EPIARAALAAFG 296 (297)
T ss_dssp HHHHHHHSTT--CCCCEEETTCCSSGGG-GC-HHHHHHHHHHTT
T ss_pred HHHHHhCCCC--eeEEeccCCCCcCccc-CH-HHHHHHHHHHHh
Confidence 8888777642 3333447999998775 44 478888888875
No 172
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.69 E-value=8.2e-17 Score=172.54 Aligned_cols=212 Identities=16% Similarity=0.147 Sum_probs=132.3
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (826)
.|+||++||.+.. ...|...+..| ||.|+++|+||.+ .+.. ........+++.+.+..+++. ++.+
T Consensus 81 ~~~vv~~hG~~~~--~~~~~~~~~~l---g~~Vi~~D~~G~G---~S~~----~~~~~~~~~~~a~dl~~~l~~--l~~~ 146 (330)
T 3p2m_A 81 APRVIFLHGGGQN--AHTWDTVIVGL---GEPALAVDLPGHG---HSAW----REDGNYSPQLNSETLAPVLRE--LAPG 146 (330)
T ss_dssp CCSEEEECCTTCC--GGGGHHHHHHS---CCCEEEECCTTST---TSCC----CSSCBCCHHHHHHHHHHHHHH--SSTT
T ss_pred CCeEEEECCCCCc--cchHHHHHHHc---CCeEEEEcCCCCC---CCCC----CCCCCCCHHHHHHHHHHHHHH--hCCC
Confidence 4779999997755 44566555554 9999999999954 3321 111233466666666666665 3457
Q ss_pred cEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccC--CC----------CCCchhhhhccCcCCccCCCCCC
Q 003363 672 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT--TD----------IPDWCYVESYGSKGKDSFTESPS 739 (826)
Q Consensus 672 rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~~ 739 (826)
++.|+|||+||.+++.++.++|++++++|+.+|.......... .. ...+............ ......
T Consensus 147 ~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 225 (330)
T 3p2m_A 147 AEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIA-AAPHRD 225 (330)
T ss_dssp CCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHHH-HCTTSC
T ss_pred CcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHHh-cCCCCC
Confidence 8999999999999999999999999999999976442110000 00 0000000000000000 000000
Q ss_pred hhhHHHHhhcC------------------------cccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEE-E
Q 003363 740 VEDLTRFHSKS------------------------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK-V 794 (826)
Q Consensus 740 ~~~~~~~~~~s------------------------p~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~-~ 794 (826)
.+......... ....+.++++|+|+++|++|..+|++.+..+.+.+.. .+ +
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~v~~~~~~~l~~~~~~----~~~~ 301 (330)
T 3p2m_A 226 VKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATH----FRGV 301 (330)
T ss_dssp HHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHHCCSCEEEEEETTCCSSCHHHHHHHHHHCSS----EEEE
T ss_pred HHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC----CeeE
Confidence 01111000000 0123567899999999999999999999888877754 67 9
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 795 IVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 795 ~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
++++++||.+... ...++.+.|.+||++
T Consensus 302 ~~i~~~gH~~~~e-~p~~~~~~i~~fl~~ 329 (330)
T 3p2m_A 302 HIVEKSGHSVQSD-QPRALIEIVRGVLDT 329 (330)
T ss_dssp EEETTCCSCHHHH-CHHHHHHHHHHHTTC
T ss_pred EEeCCCCCCcchh-CHHHHHHHHHHHHhc
Confidence 9999999987543 445778888888865
No 173
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.69 E-value=4.5e-16 Score=165.20 Aligned_cols=228 Identities=16% Similarity=0.185 Sum_probs=139.6
Q ss_pred eeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHH
Q 003363 574 KPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 653 (826)
Q Consensus 574 ~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~ 653 (826)
..+++....|. .+.|.||++||.+.. ...|...+..|+++||.|+++|+|| +|.+.. +.......++
T Consensus 34 ~~l~y~~~G~~-----~~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~rvia~Dl~G---~G~S~~---~~~~~~y~~~ 100 (310)
T 1b6g_A 34 LRAHYLDEGNS-----DAEDVFLCLHGEPTW--SYLYRKMIPVFAESGARVIAPDFFG---FGKSDK---PVDEEDYTFE 100 (310)
T ss_dssp CEEEEEEEECT-----TCSCEEEECCCTTCC--GGGGTTTHHHHHHTTCEEEEECCTT---STTSCE---ESCGGGCCHH
T ss_pred eEEEEEEeCCC-----CCCCEEEEECCCCCc--hhhHHHHHHHHHhCCCeEEEeCCCC---CCCCCC---CCCcCCcCHH
Confidence 67766555432 114789999997754 4578888899999999999999999 444421 1111123455
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccc--hhh------hccCCCC--CCchhh
Q 003363 654 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN--LAL------MVGTTDI--PDWCYV 723 (826)
Q Consensus 654 D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~--~~~------~~~~~~~--~~~~~~ 723 (826)
++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++... ... +...... ..|...
T Consensus 101 ~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (310)
T 1b6g_A 101 FHRNFLLALIER--LDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAWKYD 178 (310)
T ss_dssp HHHHHHHHHHHH--HTCCSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCCCCCCTTTCTHHHHTTTSSTTTHHHHHHH
T ss_pred HHHHHHHHHHHH--cCCCCEEEEEcChHHHHHHHHHHhChHhheEEEEeccccccCCccccchhhhhhccchHHHHHHHH
Confidence 555555555554 2347899999999999999999999999999999887431 000 0000000 001000
Q ss_pred hhcc-------------C----cCCccCCC-CCCh---hhHHHHhh--c-----------CcccccC-CCCCcEEEEEeC
Q 003363 724 ESYG-------------S----KGKDSFTE-SPSV---EDLTRFHS--K-----------SPISHIS-KVKTPTIFLLGA 768 (826)
Q Consensus 724 ~~~~-------------~----~~~~~~~~-~~~~---~~~~~~~~--~-----------sp~~~~~-~i~~PvLii~G~ 768 (826)
.... . .....+.. .... .....+.. . .....+. ++++|+|+++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~P~Lvi~G~ 258 (310)
T 1b6g_A 179 LVTPSDLRLDQFMKRWAPTLTEAEASAYAAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFWQNDWNGQTFMAIGM 258 (310)
T ss_dssp HHSCSSCCHHHHHHHHSTTCCHHHHHHHHTTCSSGGGCHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHTCCSEEEEEEET
T ss_pred hccCchhhhhhHHhhcCCCCCHHHHHHHhcccCCccchHHHHHHHHHhcccccchhhhhhhHhhhhhccccCceEEEecc
Confidence 0000 0 00000000 0000 00000000 0 0112355 899999999999
Q ss_pred CCCCCCcHHHHHHHHHHHhCCCCEEEEEe--CCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 769 QDLRVPVSNGLQYARALREKGVETKVIVF--PNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 769 ~D~~vp~~~~~~~~~~l~~~g~~~~~~~~--p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
+|..+| ..+..+.+.+.+ .+++++ +++||.... ...++.+.+.+||.+
T Consensus 259 ~D~~~~-~~~~~~~~~ip~----~~~~~i~~~~~GH~~~~--~p~~~~~~i~~Fl~~ 308 (310)
T 1b6g_A 259 KDKLLG-PDVMYPMKALIN----GCPEPLEIADAGHFVQE--FGEQVAREALKHFAE 308 (310)
T ss_dssp TCSSSS-HHHHHHHHHHST----TCCCCEEETTCCSCGGG--GHHHHHHHHHHHHHH
T ss_pred Ccchhh-hHHHHHHHhccc----ccceeeecCCcccchhh--ChHHHHHHHHHHHhc
Confidence 999999 888888887765 344444 999998776 455888999999975
No 174
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.69 E-value=6.4e-17 Score=169.96 Aligned_cols=225 Identities=12% Similarity=0.166 Sum_probs=140.7
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..++...+.+ ...|+||++||.+.. ...|...+..|+ +||.|+++|+||.+. +.. ......
T Consensus 18 ~g~~l~~~~~g~------~~~~~vl~lHG~~~~--~~~~~~~~~~l~-~~~~v~~~d~~G~G~---s~~-----~~~~~~ 80 (299)
T 3g9x_A 18 LGERMHYVDVGP------RDGTPVLFLHGNPTS--SYLWRNIIPHVA-PSHRCIAPDLIGMGK---SDK-----PDLDYF 80 (299)
T ss_dssp TTEEEEEEEESC------SSSCCEEEECCTTCC--GGGGTTTHHHHT-TTSCEEEECCTTSTT---SCC-----CCCCCC
T ss_pred CCeEEEEEecCC------CCCCEEEEECCCCcc--HHHHHHHHHHHc-cCCEEEeeCCCCCCC---CCC-----CCCccc
Confidence 566776555532 235689999997765 446666777774 699999999999543 321 111345
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCC----------CCCc-
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD----------IPDW- 720 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~----------~~~~- 720 (826)
++++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.++............ .+..
T Consensus 81 ~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (299)
T 3g9x_A 81 FDDHVRYLDAFIEA--LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWPEFARETFQAFRTADVG 158 (299)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECCCBSSGGGSCGGGHHHHHHHTSSSHH
T ss_pred HHHHHHHHHHHHHH--hCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCcchhhhhhcchHHHHHHHHHcCCCcc
Confidence 67777777777666 3557899999999999999999999999999999885433210000000 0000
Q ss_pred --------hhhhhccCcCCccCCCCCChhhHHHHh-----------------hc--------------CcccccCCCCCc
Q 003363 721 --------CYVESYGSKGKDSFTESPSVEDLTRFH-----------------SK--------------SPISHISKVKTP 761 (826)
Q Consensus 721 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~--------------sp~~~~~~i~~P 761 (826)
.+...+.. ..+......+....+. .. +....+.++++|
T Consensus 159 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 235 (299)
T 3g9x_A 159 RELIIDQNAFIEGALP---KCVVRPLTEVEMDHYREPFLKPVDREPLWRFPNELPIAGEPANIVALVEAYMNWLHQSPVP 235 (299)
T ss_dssp HHHHTTSCHHHHTHHH---HTCSSCCCHHHHHHHHGGGSSGGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCSC
T ss_pred hhhhccchhhHHHhhh---hhhccCCCHHHHHHHHHHhccccccchhhhhhhhhhhccccchhhhhhhhhhhhcccCCCC
Confidence 00000000 0000000111111110 00 111224678999
Q ss_pred EEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 762 TIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 762 vLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
+|+++|++|..+|++.+..+.+.+.. +++++++++||.+.... ..++.+.|.+++.+
T Consensus 236 ~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~gH~~~~e~-p~~~~~~i~~~~~~ 292 (299)
T 3g9x_A 236 KLLFWGTPGVLIPPAEAARLAESLPN----CKTVDIGPGLHYLQEDN-PDLIGSEIARWLPA 292 (299)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHSTT----EEEEEEEEESSCHHHHC-HHHHHHHHHHHSGG
T ss_pred eEEEecCCCCCCCHHHHHHHHhhCCC----CeEEEeCCCCCcchhcC-HHHHHHHHHHHHhh
Confidence 99999999999999999888887754 78999999999865433 33666666666544
No 175
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.68 E-value=3.4e-17 Score=170.00 Aligned_cols=216 Identities=16% Similarity=0.157 Sum_probs=132.2
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
+.|+||++||.+.. ...|...+..|.++||.|+++|+||.+...... .......++++.+.+..+++. ++.
T Consensus 23 ~~~~vv~lHG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~ 93 (279)
T 4g9e_A 23 EGAPLLMIHGNSSS--GAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAI-----DPDRSYSMEGYADAMTEVMQQ--LGI 93 (279)
T ss_dssp CEEEEEEECCTTCC--GGGGHHHHHSHHHHHEEEEEECCTTSTTSCCCS-----CHHHHSSHHHHHHHHHHHHHH--HTC
T ss_pred CCCeEEEECCCCCc--hhHHHHHHhHHHhcCCeEEeecCCCCCCCCCCC-----CcccCCCHHHHHHHHHHHHHH--hCC
Confidence 56889999997755 556877888877789999999999955432210 011123456666666666655 345
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCc-cchhhhc-cCCCCCCchh----------hhhccCcCCccCCCCC
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL-CNLALMV-GTTDIPDWCY----------VESYGSKGKDSFTESP 738 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~-~~~~~~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 738 (826)
+++.|+|||+||.+++.++.++|+ +.++|+.++. ....... .......... ...+.. ..+....
T Consensus 94 ~~~~lvG~S~Gg~~a~~~a~~~p~-~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 169 (279)
T 4g9e_A 94 ADAVVFGWSLGGHIGIEMIARYPE-MRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERDVESYAR---STCGEPF 169 (279)
T ss_dssp CCCEEEEETHHHHHHHHHTTTCTT-CCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHH---HHHCSSC
T ss_pred CceEEEEECchHHHHHHHHhhCCc-ceeEEEecCCCCCCCccchhhccchhhhhcCcccccHHHHHHHHH---hhccCcc
Confidence 689999999999999999999999 5555555443 2221110 0000000000 000000 0000000
Q ss_pred ChhhHHHHh------------------hcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHH-HHHHhCCCCEEEEEeCC
Q 003363 739 SVEDLTRFH------------------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYA-RALREKGVETKVIVFPN 799 (826)
Q Consensus 739 ~~~~~~~~~------------------~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~-~~l~~~g~~~~~~~~p~ 799 (826)
.......+. ..+....+.++++|+|+++|++|..+|++....+. +.+. .++++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----~~~~~~~~~ 245 (279)
T 4g9e_A 170 EASLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEAQLPIAVVNGRDEPFVELDFVSKVKFGNLW----EGKTHVIDN 245 (279)
T ss_dssp CHHHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHCCSCEEEEEETTCSSBCHHHHTTCCCSSBG----GGSCEEETT
T ss_pred cHHHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhcCCCEEEEEcCCCcccchHHHHHHhhccCC----CCeEEEECC
Confidence 001111111 11222335678999999999999999998877665 3333 367889999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 800 DVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 800 ~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
+||.... +...++.+.+.+||++.
T Consensus 246 ~gH~~~~-~~p~~~~~~i~~fl~~~ 269 (279)
T 4g9e_A 246 AGHAPFR-EAPAEFDAYLARFIRDC 269 (279)
T ss_dssp CCSCHHH-HSHHHHHHHHHHHHHHH
T ss_pred CCcchHH-hCHHHHHHHHHHHHHHh
Confidence 9998653 34457888999999875
No 176
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.68 E-value=5.1e-16 Score=152.05 Aligned_cols=180 Identities=15% Similarity=0.124 Sum_probs=122.6
Q ss_pred CcEEEEEcCCCCCCCCccchHHHH-HHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLA-FLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~-~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
.|+||++||.+.... ..|...+. .|+++||.|+++|+|.+.. + ..+++.+.+..+++. + .
T Consensus 4 ~p~vv~~HG~~~~~~-~~~~~~~~~~l~~~g~~v~~~d~~~~~~---------~------~~~~~~~~~~~~~~~--~-~ 64 (192)
T 1uxo_A 4 TKQVYIIHGYRASST-NHWFPWLKKRLLADGVQADILNMPNPLQ---------P------RLEDWLDTLSLYQHT--L-H 64 (192)
T ss_dssp CCEEEEECCTTCCTT-STTHHHHHHHHHHTTCEEEEECCSCTTS---------C------CHHHHHHHHHTTGGG--C-C
T ss_pred CCEEEEEcCCCCCcc-hhHHHHHHHHHHhCCcEEEEecCCCCCC---------C------CHHHHHHHHHHHHHh--c-c
Confidence 478999999776532 15666564 6889999999999993211 1 355555555555444 2 5
Q ss_pred CcEEEEEecchHHHHHHHHHhCCC--ceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhh
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPD--KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHS 748 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~--~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (826)
+++.++|||+||.+++.++.++|+ +++++|+.+|...... .+.... .+...+.
T Consensus 65 ~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~--------~~~~~~--------~~~~~~~--------- 119 (192)
T 1uxo_A 65 ENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLP--------TLQMLD--------EFTQGSF--------- 119 (192)
T ss_dssp TTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCT--------TCGGGG--------GGTCSCC---------
T ss_pred CCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccc--------cchhhh--------hhhhcCC---------
Confidence 789999999999999999999999 9999999998654211 010000 0111110
Q ss_pred cCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHH
Q 003363 749 KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQ--SDFESFLNIGLWFK 822 (826)
Q Consensus 749 ~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~--~~~~~~~~i~~w~~ 822 (826)
....+.++++|+|+++|++|..+|++.+..+.+.+ . .+++++++++|.+.... ...++...+.+|++
T Consensus 120 --~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~----~~~~~~~~~gH~~~~~~~~~~~~~~~~l~~~l~ 188 (192)
T 1uxo_A 120 --DHQKIIESAKHRAVIASKDDQIVPFSFSKDLAQQI-D----AALYEVQHGGHFLEDEGFTSLPIVYDVLTSYFS 188 (192)
T ss_dssp --CHHHHHHHEEEEEEEEETTCSSSCHHHHHHHHHHT-T----CEEEEETTCTTSCGGGTCSCCHHHHHHHHHHHH
T ss_pred --CHHHHHhhcCCEEEEecCCCCcCCHHHHHHHHHhc-C----ceEEEeCCCcCcccccccccHHHHHHHHHHHHH
Confidence 01223456689999999999999999998888877 3 68999999999876432 22234444445544
No 177
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.68 E-value=3.1e-16 Score=180.59 Aligned_cols=232 Identities=15% Similarity=0.150 Sum_probs=145.1
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcc
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~ 650 (826)
.+|..++.... ++.|+||++||++.. ...|...+..|+++||.|+++|+||.+.+.. +......
T Consensus 245 ~dg~~l~~~~~--------g~~p~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~D~~G~G~S~~------~~~~~~~ 308 (555)
T 3i28_A 245 KPRVRLHFVEL--------GSGPAVCLCHGFPES--WYSWRYQIPALAQAGYRVLAMDMKGYGESSA------PPEIEEY 308 (555)
T ss_dssp ETTEEEEEEEE--------CSSSEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTTSTTSCC------CSCGGGG
T ss_pred CCCcEEEEEEc--------CCCCEEEEEeCCCCc--hhHHHHHHHHHHhCCCEEEEecCCCCCCCCC------CCCcccc
Confidence 35677764433 145899999998765 4577788899999999999999999544321 1111223
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhcc-----CCCCCCch----
Q 003363 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG-----TTDIPDWC---- 721 (826)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~-----~~~~~~~~---- 721 (826)
..+++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|......... ....+.+.
T Consensus 309 ~~~~~~~d~~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (555)
T 3i28_A 309 CMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQLY 386 (555)
T ss_dssp SHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCTTSCHHHHHHTCGGGHHHHH
T ss_pred cHHHHHHHHHHHHHH--cCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCCCCCCcccchHHHHhcCCccchhHH
Confidence 355555555444444 2457899999999999999999999999999999887532100000 00000000
Q ss_pred ------------------hhhhccCc---------------------CCccCCCCCChhhHHHHh---------------
Q 003363 722 ------------------YVESYGSK---------------------GKDSFTESPSVEDLTRFH--------------- 747 (826)
Q Consensus 722 ------------------~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~--------------- 747 (826)
+...+... ...........+....+.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (555)
T 3i28_A 387 FQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWY 466 (555)
T ss_dssp HHSTTHHHHHHHHCHHHHHHHHSCCTTSCCCCCSSHHHHTSSSTTSCSSCCCCTTCCHHHHHHHHHHHTTTTTHHHHHTT
T ss_pred hhCCCchHHHHhhhHHHHHHHHhccccccccccccccccccccccCccccccccccCHHHHHHHHHHHhcccchhHHHHH
Confidence 00000000 000000000111111110
Q ss_pred -------hcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 003363 748 -------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLW 820 (826)
Q Consensus 748 -------~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w 820 (826)
..+....+.++++|+|+++|++|..+|++.+..+++.+. .+++++++++||..... ...++.+.+.+|
T Consensus 467 ~~~~~~~~~~~~~~~~~i~~Pvlii~G~~D~~~~~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e-~p~~~~~~i~~f 541 (555)
T 3i28_A 467 RNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIP----HLKRGHIEDCGHWTQMD-KPTEVNQILIKW 541 (555)
T ss_dssp SCHHHHHHHHHTTTTCCCCSCEEEEEETTCSSSCGGGGTTGGGTCT----TCEEEEETTCCSCHHHH-SHHHHHHHHHHH
T ss_pred HhccccchhhccccccccccCEEEEEeCCCCCcCHHHHHHHHhhCC----CceEEEeCCCCCCcchh-CHHHHHHHHHHH
Confidence 012233456889999999999999999998887776664 37899999999976543 345788899999
Q ss_pred HHHHc
Q 003363 821 FKKYC 825 (826)
Q Consensus 821 ~~~~l 825 (826)
|+++.
T Consensus 542 l~~~~ 546 (555)
T 3i28_A 542 LDSDA 546 (555)
T ss_dssp HHHHT
T ss_pred HHhcc
Confidence 98864
No 178
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.68 E-value=2.8e-16 Score=167.29 Aligned_cols=229 Identities=14% Similarity=0.175 Sum_probs=140.2
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..+++...- .++.|.||++||.+.+ ...|...+..|++ +|.|+++|+|| +|.+.. + .....
T Consensus 15 ~g~~l~y~~~G------~g~~~pvvllHG~~~~--~~~w~~~~~~L~~-~~~via~Dl~G---~G~S~~---~--~~~~~ 77 (316)
T 3afi_E 15 LGSSMAYRETG------AQDAPVVLFLHGNPTS--SHIWRNILPLVSP-VAHCIAPDLIG---FGQSGK---P--DIAYR 77 (316)
T ss_dssp TTEEEEEEEES------CTTSCEEEEECCTTCC--GGGGTTTHHHHTT-TSEEEEECCTT---STTSCC---C--SSCCC
T ss_pred CCEEEEEEEeC------CCCCCeEEEECCCCCc--hHHHHHHHHHHhh-CCEEEEECCCC---CCCCCC---C--CCCCC
Confidence 45566544432 1223589999998765 4577777888865 49999999999 444421 1 11235
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccc---hhhhc----------------
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN---LALMV---------------- 712 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~---~~~~~---------------- 712 (826)
++++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++... +....
T Consensus 78 ~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
T 3afi_E 78 FFDHVRYLDAFIEQ--RGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAEAARA 155 (316)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEECCCBSSGGGTTCCCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--cCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeeccCCCcchhhhccchhhccccccchhHHH
Confidence 66666666666665 3457899999999999999999999999999999876321 10000
Q ss_pred --cCCCCCCch--hhh---hccCcCCcc-CCCCCChhhHHHHh-----------------hcCc--------------cc
Q 003363 713 --GTTDIPDWC--YVE---SYGSKGKDS-FTESPSVEDLTRFH-----------------SKSP--------------IS 753 (826)
Q Consensus 713 --~~~~~~~~~--~~~---~~~~~~~~~-~~~~~~~~~~~~~~-----------------~~sp--------------~~ 753 (826)
.....+... ... .+....... .......+..+.+. .... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T 3afi_E 156 VFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQSAHA 235 (316)
T ss_dssp HHHHHTSTTHHHHHHTTSCHHHHTTTGGGCSSCCCHHHHHHHHTTCCSTGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHH
T ss_pred HHHHhcCCchhhHHHhccchHHHHhcccccCCCCCHHHHHHHHhhcCCccchhHHHHHHHhccccccchhhhhHHHHHHH
Confidence 000000000 000 000000000 00000001111110 0000 01
Q ss_pred ccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 754 HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 754 ~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
.+.++++|+|+++|++|..+|++.++.+.+.+.. .++++++++||....+ ...++.+.|.+||++.
T Consensus 236 ~l~~i~~P~Lvi~G~~D~~~~~~~~~~~~~~~p~----~~~~~i~~~GH~~~~e-~p~~~~~~i~~fl~~~ 301 (316)
T 3afi_E 236 ALAASSYPKLLFTGEPGALVSPEFAERFAASLTR----CALIRLGAGLHYLQED-HADAIGRSVAGWIAGI 301 (316)
T ss_dssp HHHHCCSCEEEEEEEECSSSCHHHHHHHHHHSSS----EEEEEEEEECSCHHHH-HHHHHHHHHHHHHHHH
T ss_pred hhhccCCCeEEEecCCCCccCHHHHHHHHHhCCC----CeEEEcCCCCCCchhh-CHHHHHHHHHHHHhhc
Confidence 2346899999999999999999888888777654 7999999999986544 3447888899999764
No 179
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.68 E-value=6.8e-16 Score=167.32 Aligned_cols=122 Identities=20% Similarity=0.260 Sum_probs=89.1
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcc
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~ 650 (826)
.+|..+++....|+ ....|+||++||.+.. ...|...+..|+++||.|+++|+||.+. +.. +......
T Consensus 10 ~~g~~l~y~~~G~~----~~~~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~vi~~d~~g~g~---s~~---~~~~~~~ 77 (356)
T 2e3j_A 10 CRGTRIHAVADSPP----DQQGPLVVLLHGFPES--WYSWRHQIPALAGAGYRVVAIDQRGYGR---SSK---YRVQKAY 77 (356)
T ss_dssp ETTEEEEEEEECCT----TCCSCEEEEECCTTCC--GGGGTTTHHHHHHTTCEEEEECCTTSTT---SCC---CCSGGGG
T ss_pred cCCeEEEEEEecCC----CCCCCEEEEECCCCCc--HHHHHHHHHHHHHcCCEEEEEcCCCCCC---CCC---CCccccc
Confidence 35677877776654 2346889999997755 4567778888999999999999999543 321 1111123
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCcc
Q 003363 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (826)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 706 (826)
...++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.++..
T Consensus 78 ~~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 78 RIKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp SHHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred CHHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 455555555555554 456789999999999999999999999999999988654
No 180
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.68 E-value=7.5e-16 Score=161.17 Aligned_cols=231 Identities=15% Similarity=0.218 Sum_probs=132.8
Q ss_pred ccCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCC
Q 003363 569 TKGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVG 648 (826)
Q Consensus 569 ~~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~ 648 (826)
...+|..+++..+.+.+ +.|.||++||.+.. ...|...+..|++ ||.|+++|+||.| .+... ....
T Consensus 11 ~~~~g~~l~~~~~g~~~-----~~~~vvllHG~~~~--~~~~~~~~~~L~~-~~~vi~~Dl~G~G---~S~~~---~~~~ 76 (285)
T 3bwx_A 11 TSSDGLRLHFRAYEGDI-----SRPPVLCLPGLTRN--ARDFEDLATRLAG-DWRVLCPEMRGRG---DSDYA---KDPM 76 (285)
T ss_dssp ECTTSCEEEEEEECBCT-----TSCCEEEECCTTCC--GGGGHHHHHHHBB-TBCEEEECCTTBT---TSCCC---SSGG
T ss_pred ecCCCceEEEEEcCCCC-----CCCcEEEECCCCcc--hhhHHHHHHHhhc-CCEEEeecCCCCC---CCCCC---CCcc
Confidence 34467778777665431 24679999997654 5578888888876 9999999999954 43211 1111
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCC--ccchhh------hccCC-CCCC
Q 003363 649 SQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP--LCNLAL------MVGTT-DIPD 719 (826)
Q Consensus 649 ~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p--~~~~~~------~~~~~-~~~~ 719 (826)
...++++.+.+..+++. +..+++.|+||||||.+++.+|.++|++++++|+.++ ...... +.... ....
T Consensus 77 ~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (285)
T 3bwx_A 77 TYQPMQYLQDLEALLAQ--EGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFET 154 (285)
T ss_dssp GCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHTTCCCEESS
T ss_pred ccCHHHHHHHHHHHHHh--cCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEecCCcccCcchhHHHHHHhcCCccccc
Confidence 22344433333333333 2346899999999999999999999999999998643 221100 00000 0001
Q ss_pred chhhhh-ccCcCCccCCCCCChhhHHHH----hhc----------Cc------------------ccccCCC-CCcEEEE
Q 003363 720 WCYVES-YGSKGKDSFTESPSVEDLTRF----HSK----------SP------------------ISHISKV-KTPTIFL 765 (826)
Q Consensus 720 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~----------sp------------------~~~~~~i-~~PvLii 765 (826)
|..... ........+.... ......+ ... ++ ...+.++ ++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii 233 (285)
T 3bwx_A 155 WMHAARALQESSGDVYPDWD-ITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQVDMWPLFDALATRPLLVL 233 (285)
T ss_dssp HHHHHHHHHHHHTTTSTTCC-HHHHHHHHHHHEEECTTSCEEESBCGGGGCCTTSCTTCCCSSCCHHHHHHHTTSCEEEE
T ss_pred HHHHHHHHHHhhhhcccccC-hHHHHHHHHhhheeCCCCceeeccCHHHHHHHhhhhhccccchhhHHHHHccCCCeEEE
Confidence 100000 0000000000000 0000000 000 00 0011223 7999999
Q ss_pred EeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 766 LGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 766 ~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
+|++|..+++..+.++.+. ...++++++++||.....+. +.+..|.+||++
T Consensus 234 ~G~~D~~~~~~~~~~~~~~-----~~~~~~~i~~~gH~~~~e~p--~~~~~i~~fl~~ 284 (285)
T 3bwx_A 234 RGETSDILSAQTAAKMASR-----PGVELVTLPRIGHAPTLDEP--ESIAAIGRLLER 284 (285)
T ss_dssp EETTCSSSCHHHHHHHHTS-----TTEEEEEETTCCSCCCSCSH--HHHHHHHHHHTT
T ss_pred EeCCCCccCHHHHHHHHhC-----CCcEEEEeCCCCccchhhCc--hHHHHHHHHHHh
Confidence 9999999998877665544 45899999999998765443 234678899864
No 181
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.68 E-value=3.3e-16 Score=162.45 Aligned_cols=212 Identities=16% Similarity=0.169 Sum_probs=132.2
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCc
Q 003363 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 672 (826)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 672 (826)
|.||++||.+.. ...|...+..|++. |.|+++|+||.| .+... ... ...++++.+.+..+++. ++.++
T Consensus 17 ~~vvllHG~~~~--~~~~~~~~~~L~~~-~~vi~~Dl~G~G---~S~~~---~~~-~~~~~~~~~dl~~~l~~--l~~~~ 84 (269)
T 2xmz_A 17 QVLVFLHGFLSD--SRTYHNHIEKFTDN-YHVITIDLPGHG---EDQSS---MDE-TWNFDYITTLLDRILDK--YKDKS 84 (269)
T ss_dssp EEEEEECCTTCC--GGGGTTTHHHHHTT-SEEEEECCTTST---TCCCC---TTS-CCCHHHHHHHHHHHHGG--GTTSE
T ss_pred CeEEEEcCCCCc--HHHHHHHHHHHhhc-CeEEEecCCCCC---CCCCC---CCC-ccCHHHHHHHHHHHHHH--cCCCc
Confidence 469999997765 45677778888765 999999999954 43211 010 23466666666666665 34578
Q ss_pred EEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhcc----CCCCCCc---------h-hhhhccCcCCccCCC--
Q 003363 673 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVG----TTDIPDW---------C-YVESYGSKGKDSFTE-- 736 (826)
Q Consensus 673 v~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~----~~~~~~~---------~-~~~~~~~~~~~~~~~-- 736 (826)
+.|+||||||.+++.++.++|++++++|+.+|......... ......+ . +...+... ..+..
T Consensus 85 ~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 162 (269)
T 2xmz_A 85 ITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKL--PLFQSQL 162 (269)
T ss_dssp EEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCSCCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS--GGGGGGG
T ss_pred EEEEEECchHHHHHHHHHhCchheeeeEEEcCCcccCCchhHHHHhhhhhHHHHhhccccHHHHHHHHHhC--ccccccc
Confidence 99999999999999999999999999999987543210000 0000000 0 00000000 00000
Q ss_pred -CC--------------ChhhH-HHHh------hcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEE
Q 003363 737 -SP--------------SVEDL-TRFH------SKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKV 794 (826)
Q Consensus 737 -~~--------------~~~~~-~~~~------~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~ 794 (826)
.. ..... ..+. ..+....+.++++|+|+++|++|..+|+.... +.+.+. .+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~-~~~~~~----~~~~ 237 (269)
T 2xmz_A 163 ELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKK-MANLIP----NSKC 237 (269)
T ss_dssp GSCHHHHHHHHHHHHTSCHHHHHHHHHHHSTTTSCCCGGGGGGCCSCEEEEEETTCHHHHHHHHH-HHHHST----TEEE
T ss_pred cCCHHHHHHHHHHHhccCcHHHHHHHHHHHhccCccHHHHHHhcCCCEEEEEeCCCcccCHHHHH-HHhhCC----CcEE
Confidence 00 00000 0010 01112356788999999999999998876643 554443 4899
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 795 IVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 795 ~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
++++++||.+.... ..++.+.|.+|+++.
T Consensus 238 ~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~ 266 (269)
T 2xmz_A 238 KLISATGHTIHVED-SDEFDTMILGFLKEE 266 (269)
T ss_dssp EEETTCCSCHHHHS-HHHHHHHHHHHHHHH
T ss_pred EEeCCCCCChhhcC-HHHHHHHHHHHHHHh
Confidence 99999999876543 457888999999865
No 182
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.68 E-value=5.6e-16 Score=161.18 Aligned_cols=217 Identities=18% Similarity=0.134 Sum_probs=133.7
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC-C
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN-P 670 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d-~ 670 (826)
.|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+.... .....++++.+.+..+++. ++ .
T Consensus 4 ~~~vvllHG~~~~--~~~w~~~~~~L~~~g~rVia~Dl~G~G~S~~~~-------~~~~~~~~~a~dl~~~l~~--l~~~ 72 (273)
T 1xkl_A 4 GKHFVLVHGACHG--GWSWYKLKPLLEAAGHKVTALDLAASGTDLRKI-------EELRTLYDYTLPLMELMES--LSAD 72 (273)
T ss_dssp CCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEECCCTTSTTCCCCG-------GGCCSHHHHHHHHHHHHHT--SCSS
T ss_pred CCeEEEECCCCCC--cchHHHHHHHHHhCCCEEEEecCCCCCCCccCc-------ccccCHHHHHHHHHHHHHH--hccC
Confidence 4679999997654 456888889999999999999999954332110 1123466666666556655 32 3
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchh---------hhccCCCCCCchhhh--hccC-----------
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA---------LMVGTTDIPDWCYVE--SYGS----------- 728 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~---------~~~~~~~~~~~~~~~--~~~~----------- 728 (826)
+++.|+||||||.+++.++.++|++++++|+.++..... .+........|.... .+..
T Consensus 73 ~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T 1xkl_A 73 EKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFG 152 (273)
T ss_dssp SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECC
T ss_pred CCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccC
Confidence 689999999999999999999999999999888642100 000000000000000 0000
Q ss_pred -cCC-ccCCCCCChhhHHHHh---hc-----------CcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCE
Q 003363 729 -KGK-DSFTESPSVEDLTRFH---SK-----------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVET 792 (826)
Q Consensus 729 -~~~-~~~~~~~~~~~~~~~~---~~-----------sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~ 792 (826)
... ..+......+...... .. .........++|+|+++|++|..+|+..++.+.+.+.. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p~----~ 228 (273)
T 1xkl_A 153 PKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGV----T 228 (273)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCCCTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCC----S
T ss_pred HHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhcccccchhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCCC----C
Confidence 000 0000000001000000 00 00100111368999999999999999999888888754 5
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 793 KVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 793 ~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
+++++|++||....... .++.+.+.+|+++.
T Consensus 229 ~~~~i~~aGH~~~~e~P-~~~~~~i~~fl~~~ 259 (273)
T 1xkl_A 229 EAIEIKGADHMAMLCEP-QKLCASLLEIAHKY 259 (273)
T ss_dssp EEEEETTCCSCHHHHSH-HHHHHHHHHHHHHC
T ss_pred eEEEeCCCCCCchhcCH-HHHHHHHHHHHHHh
Confidence 89999999998764443 47888999999764
No 183
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.67 E-value=4.4e-16 Score=162.62 Aligned_cols=224 Identities=14% Similarity=0.075 Sum_probs=138.0
Q ss_pred cEEEEEcCCCCCCCCccchH---HHHHHHHCCcEEEEECCCCCCCCchhhhhcCC--CCCCcchHHHH--HHHHHHHHHc
Q 003363 593 PLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP--GKVGSQDVNDV--LTAIDHVIDM 665 (826)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~--~~~~~~~~~D~--~~~i~~l~~~ 665 (826)
|+||++||++.......|.. ..+.+++.||.|+++|.++...+.... .... +........+. .+++.++.++
T Consensus 30 ~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~l~~~i~~~ 108 (280)
T 1dqz_A 30 HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWY-QPSQSNGQNYTYKWETFLTREMPAWLQAN 108 (280)
T ss_dssp SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTSBCS-SSCTTTTCCSCCBHHHHHHTHHHHHHHHH
T ss_pred CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCccccCCC-CCCccccccccccHHHHHHHHHHHHHHHH
Confidence 58999999753222334443 235677889999999988654332110 0000 00011223332 2344444443
Q ss_pred CCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHH
Q 003363 666 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTR 745 (826)
Q Consensus 666 ~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (826)
..+++++++|+||||||++++.++.++|++|+++++.+|..+.........+.. .....+......+.+.+. ...
T Consensus 109 ~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~---~~~ 183 (280)
T 1dqz_A 109 KGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESWWPTLIGL--AMNDSGGYNANSMWGPSS---DPA 183 (280)
T ss_dssp HCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTTHHHHHHH--HHHHTTSCCHHHHHCSTT---SHH
T ss_pred cCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcchhhhHHH--HhhhccCcCHHHhcCCCC---chh
Confidence 346778999999999999999999999999999999999876432100000000 000000000000001111 124
Q ss_pred HhhcCcccccCCC---CCcEEEEEeCCCC--------------CCCcHHHHHHHHHHHhCC-CCEEEEEeCCCCCCCCCC
Q 003363 746 FHSKSPISHISKV---KTPTIFLLGAQDL--------------RVPVSNGLQYARALREKG-VETKVIVFPNDVHGIERP 807 (826)
Q Consensus 746 ~~~~sp~~~~~~i---~~PvLii~G~~D~--------------~vp~~~~~~~~~~l~~~g-~~~~~~~~p~~~H~~~~~ 807 (826)
+...+|...+.++ .+|+++.||+.|. .++..++++++++|+++| +++++.++++++|.+.
T Consensus 184 ~~~~~p~~~~~~l~~~~~~~~l~~G~~D~~~~~~~~~~~~~~e~~~~~~~~~~~~~L~~~g~~~~~~~~~~~g~H~~~-- 261 (280)
T 1dqz_A 184 WKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAADGGRNGVFNFPPNGTHSWP-- 261 (280)
T ss_dssp HHHTCTTTTHHHHHHHTCEEEEECCCSCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCSCCCSSHH--
T ss_pred hhhcCHHHHHHHHHhcCCeEEEEeCCCCcccccccccchhhHHHHHHHHHHHHHHHHHhCCCCceEEEecCCCccChH--
Confidence 4556776555544 5899999999997 578899999999999999 9999999999999752
Q ss_pred CCHHHHHHHHHHHHHHHc
Q 003363 808 QSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 808 ~~~~~~~~~i~~w~~~~l 825 (826)
.....+...+.||.+.|
T Consensus 262 -~w~~~l~~~l~~l~~~l 278 (280)
T 1dqz_A 262 -YWNEQLVAMKADIQHVL 278 (280)
T ss_dssp -HHHHHHHHTHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHh
Confidence 12344566777777665
No 184
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.67 E-value=8.1e-17 Score=180.23 Aligned_cols=228 Identities=17% Similarity=0.219 Sum_probs=138.3
Q ss_pred CCcEEEEEcCCCCCCCCc-cchHHHH---HHHHCCcEEEEECCCCCCCCchhhhhcC-CC--C---C----CcchHHHHH
Q 003363 591 CDPLIVVLHGGPHSVSLS-SYSKSLA---FLSSVGYSLLIVNYRGSLGFGEEALQSL-PG--K---V----GSQDVNDVL 656 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~-~~~~~~~---~la~~G~~Vl~~d~rG~~g~G~~~~~~~-~~--~---~----~~~~~~D~~ 656 (826)
..|+||++||.+...... .|...+. .|...||.|+++|+||+ ++|.+..... +. . + ....++|+.
T Consensus 108 ~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~-~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a 186 (444)
T 2vat_A 108 RDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGS-PFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDV 186 (444)
T ss_dssp SCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTC-SSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHH
T ss_pred CCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCC-CCCCCCCCCCCcccccccccccccccccHHHHH
Confidence 458999999977664321 1544443 46678999999999994 1333221000 00 0 1 123567777
Q ss_pred HHHHHHHHcCCCCCCc-EEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc-------c--CCCCCCch-----
Q 003363 657 TAIDHVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV-------G--TTDIPDWC----- 721 (826)
Q Consensus 657 ~~i~~l~~~~~~d~~r-v~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~-------~--~~~~~~~~----- 721 (826)
+.+..+++. ++.++ +.|+||||||.+++.++.++|++++++|+.++........ . ....+.|.
T Consensus 187 ~dl~~ll~~--l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (444)
T 2vat_A 187 RIHRQVLDR--LGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCRQSGWCAAWFETQRQCIYDDPKYLDGEYD 264 (444)
T ss_dssp HHHHHHHHH--HTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSBCCHHHHHHHHHHHHHHHHSTTSGGGTCC
T ss_pred HHHHHHHHh--cCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEeccccCCccchhHHHHHHHHHhcCCcccccccc
Confidence 777666665 34467 9999999999999999999999999999998865421000 0 00000000
Q ss_pred -------------------------hhhhccCcCCc-c----------------------CCCCC--ChhhH--------
Q 003363 722 -------------------------YVESYGSKGKD-S----------------------FTESP--SVEDL-------- 743 (826)
Q Consensus 722 -------------------------~~~~~~~~~~~-~----------------------~~~~~--~~~~~-------- 743 (826)
+...+...... . +.... ..+..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (444)
T 2vat_A 265 VDDQPVRGLETARKIANLTYKSKPAMDERFHMAPGVQAGRNISSQDAKKEINGTDSGNSHRAGQPIEAVSSYLRYQAQKF 344 (444)
T ss_dssp TTSCCHHHHHHHHHHHHHHTSCHHHHHHHSCCCCCCC---------------------------CGGGHHHHHHHHHHHH
T ss_pred ccCCcccchhHHHhhhhccccChHHHHHHhccCccccccccccccccccccccccccccccccCchhhHHHHHHHHHHHH
Confidence 00001100000 0 00000 00000
Q ss_pred -------------HHHhhc--------CcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeC-CCC
Q 003363 744 -------------TRFHSK--------SPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFP-NDV 801 (826)
Q Consensus 744 -------------~~~~~~--------sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p-~~~ 801 (826)
..+... +....+.++++|+|+++|++|..+|++.++++.+.+.+ +++++++ ++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~i~~PvLvi~G~~D~~~p~~~~~~l~~~~p~----~~~~~i~~~~G 420 (444)
T 2vat_A 345 AASFDANCYIAMTLKFDTHDISRGRAGSIPEALAMITQPALIICARSDGLYSFDEHVEMGRSIPN----SRLCVVDTNEG 420 (444)
T ss_dssp HHSSCHHHHHHHHHHHHTCBTTTTTCSSHHHHHTTCCSCEEEEECTTCSSSCHHHHHHHHHHSTT----EEEEECCCSCG
T ss_pred hhccCccHHHHHHHHhhhhhccccccccHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHHCCC----cEEEEeCCCCC
Confidence 000001 13345678999999999999999999999888888764 7999999 899
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 802 HGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 802 H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
|.....+ ..++...|.+||+++++
T Consensus 421 H~~~~e~-p~~~~~~i~~fL~~~l~ 444 (444)
T 2vat_A 421 HDFFVME-ADKVNDAVRGFLDQSLM 444 (444)
T ss_dssp GGHHHHT-HHHHHHHHHHHHTC---
T ss_pred cchHHhC-HHHHHHHHHHHHHHhcC
Confidence 9865433 45788899999988763
No 185
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.67 E-value=4.2e-15 Score=162.50 Aligned_cols=245 Identities=14% Similarity=0.105 Sum_probs=152.5
Q ss_pred eeeccCCCee--EEEEEEecCCCCCCCCCcEEEEEcCCCCCC--CCcc----------------ch-HHHHHH-HHCCcE
Q 003363 566 ANLTKGAQKP--FEAIFVSSSHKKDCSCDPLIVVLHGGPHSV--SLSS----------------YS-KSLAFL-SSVGYS 623 (826)
Q Consensus 566 ~~~~~~~g~~--l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~--~~~~----------------~~-~~~~~l-a~~G~~ 623 (826)
+.+++.+|.+ ..+.++.|.+. ..+.|+|.|-||..+.. +..+ +. ..+..+ .++||+
T Consensus 80 Y~std~~G~p~~~~gtv~~P~~~--~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~~~l~~G~~ 157 (462)
T 3guu_A 80 YRTTNTQNEAVADVATVWIPAKP--ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIGWALQQGYY 157 (462)
T ss_dssp EEEECTTSCEEEEEEEEEECSSC--CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHHHHHHTTCE
T ss_pred EEEECCCCCEEEEEEEEEecCCC--CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHHHHHhCCCE
Confidence 4556666755 78899999863 33589999999954322 1111 11 245566 899999
Q ss_pred EEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC-CCcEEEEEecchHHHHHHHHHhC----CC-cee
Q 003363 624 LLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN-PSKVTVVGGSHGGFLTTHLIGQA----PD-KFV 697 (826)
Q Consensus 624 Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d-~~rv~l~G~S~GG~~a~~~a~~~----p~-~~~ 697 (826)
|+++||+|.+. .+. .+.....++.++++.+.+...++ ..+++++|||+||..+++++... |+ .++
T Consensus 158 Vv~~Dy~G~G~---~y~------~~~~~~~~vlD~vrAa~~~~~~~~~~~v~l~G~S~GG~aal~aa~~~~~yapel~~~ 228 (462)
T 3guu_A 158 VVSSDHEGFKA---AFI------AGYEEGMAILDGIRALKNYQNLPSDSKVALEGYSGGAHATVWATSLAESYAPELNIV 228 (462)
T ss_dssp EEEECTTTTTT---CTT------CHHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEETHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEecCCCCCC---ccc------CCcchhHHHHHHHHHHHHhccCCCCCCEEEEeeCccHHHHHHHHHhChhhcCccceE
Confidence 99999999543 221 11112234444555444432243 47999999999999999887654 34 588
Q ss_pred EEEecCCccchhhhccCCCCCCc------------------------------------------hhhhh---cc-CcCC
Q 003363 698 AAAARNPLCNLALMVGTTDIPDW------------------------------------------CYVES---YG-SKGK 731 (826)
Q Consensus 698 a~v~~~p~~~~~~~~~~~~~~~~------------------------------------------~~~~~---~~-~~~~ 731 (826)
+++..++..|+.......+...+ |..+. +. ....
T Consensus 229 g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~~~~~~~~~ 308 (462)
T 3guu_A 229 GASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVLTYPFLNVF 308 (462)
T ss_dssp EEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHHHCTTCCGG
T ss_pred EEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHHhhccCCHH
Confidence 99999988876433211111000 00000 00 0000
Q ss_pred ccCCCCC---ChhhHHHHhhcCccc-----ccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCC
Q 003363 732 DSFTESP---SVEDLTRFHSKSPIS-----HISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 803 (826)
Q Consensus 732 ~~~~~~~---~~~~~~~~~~~sp~~-----~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~ 803 (826)
..+.+.. .....+.+.+...-. ...++++|+||+||.+|.+||+.+++++++++++.|.+++++.|++.+|.
T Consensus 309 ~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~G~~V~~~~y~~~~H~ 388 (462)
T 3guu_A 309 SLVNDTNLLNEAPIASILKQETVVQAEASYTVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAKGANINFSPYPIAEHL 388 (462)
T ss_dssp GGBSCTTGGGSTTHHHHHHHSBCCTTTCSSCCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHTTCEEEEEEESSCCHH
T ss_pred HHcCCCccccCHHHHHHHHhhcccccccccCCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHcCCCeEEEEECcCCcc
Confidence 0111000 001111222222111 13467899999999999999999999999999999999999999999997
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc
Q 003363 804 IERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 804 ~~~~~~~~~~~~~i~~w~~~~l 825 (826)
.... ..+..+++||++++
T Consensus 389 ~~~~----~~~~d~l~WL~~r~ 406 (462)
T 3guu_A 389 TAEI----FGLVPSLWFIKQAF 406 (462)
T ss_dssp HHHH----HTHHHHHHHHHHHH
T ss_pred Cchh----hhHHHHHHHHHHHh
Confidence 6422 33678899999876
No 186
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.67 E-value=1.5e-15 Score=162.42 Aligned_cols=120 Identities=20% Similarity=0.257 Sum_probs=82.4
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..++..... +.|.||++||.+.. ...|...+..|+++||.|+++|+||.| .+..... .......
T Consensus 19 ~g~~l~y~~~G--------~g~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G~G---~S~~~~~-~~~~~~~ 84 (328)
T 2cjp_A 19 NGLNMHLAELG--------EGPTILFIHGFPEL--WYSWRHQMVYLAERGYRAVAPDLRGYG---DTTGAPL-NDPSKFS 84 (328)
T ss_dssp TTEEEEEEEEC--------SSSEEEEECCTTCC--GGGGHHHHHHHHTTTCEEEEECCTTST---TCBCCCT-TCGGGGS
T ss_pred CCcEEEEEEcC--------CCCEEEEECCCCCc--hHHHHHHHHHHHHCCcEEEEECCCCCC---CCCCcCc-CCccccc
Confidence 46666544331 23789999997765 557888889999999999999999954 4321100 1112223
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCc
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~ 705 (826)
++++.+.+..+++.-..+.+++.|+||||||.+++.+|.++|++++++|+.++.
T Consensus 85 ~~~~a~dl~~~l~~l~~~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~ 138 (328)
T 2cjp_A 85 ILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVH 138 (328)
T ss_dssp HHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEccC
Confidence 444444444444331112578999999999999999999999999999998753
No 187
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.66 E-value=1.3e-14 Score=158.99 Aligned_cols=242 Identities=15% Similarity=0.128 Sum_probs=164.3
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
.+..++|||||++|++....+ ..+.+| ..++..+.+.....+ ..++|||||++|++....
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d----~~i~v~d~~~~~~~~~~~~~~~v----------~~~~~spdg~~l~~~~~~---- 94 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHS----NDVSIIDTATNNVIATVPAGSSP----------QGVAVSPDGKQVYVTNMA---- 94 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGG----TEEEEEETTTTEEEEEEECSSSE----------EEEEECTTSSEEEEEETT----
T ss_pred CcceEEECCCCCEEEEECCCC----CeEEEEECCCCeEEEEEECCCCc----------cceEECCCCCEEEEEECC----
Confidence 477899999999997765332 134455 355555555443333 789999999999886432
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccE
Q 003363 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 312 (826)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~ 312 (826)
...|++||+.+++.... ......+..++|+|||+.
T Consensus 95 ---------------------------------------~~~v~v~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~---- 129 (391)
T 1l0q_A 95 ---------------------------------------SSTLSVIDTTSNTVAGT--VKTGKSPLGLALSPDGKK---- 129 (391)
T ss_dssp ---------------------------------------TTEEEEEETTTTEEEEE--EECSSSEEEEEECTTSSE----
T ss_pred ---------------------------------------CCEEEEEECCCCeEEEE--EeCCCCcceEEECCCCCE----
Confidence 26799999999987665 344446778999999998
Q ss_pred EEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEecc
Q 003363 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 392 (826)
Q Consensus 313 lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~ 392 (826)
|++++. ....|+++|+ .+++...............|+|||++|+.....
T Consensus 130 l~~~~~--------------~~~~v~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 130 LYVTNN--------------GDKTVSVINT-----------------VTKAVINTVSVGRSPKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp EEEEET--------------TTTEEEEEET-----------------TTTEEEEEEECCSSEEEEEECTTSSEEEEEETT
T ss_pred EEEEeC--------------CCCEEEEEEC-----------------CCCcEEEEEecCCCcceEEECCCCCEEEEEeCC
Confidence 877652 2347999998 555544443333446788999999988665543
Q ss_pred CCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEE
Q 003363 393 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 472 (826)
Q Consensus 393 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~ 472 (826)
+ ..|++||+.++..... +... ..+..+.|+|||+.|++.........|+.
T Consensus 179 ~----------~~v~~~d~~~~~~~~~----------~~~~----------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~ 228 (391)
T 1l0q_A 179 S----------MSISVIDTVTNSVIDT----------VKVE----------AAPSGIAVNPEGTKAYVTNVDKYFNTVSM 228 (391)
T ss_dssp T----------TEEEEEETTTTEEEEE----------EECS----------SEEEEEEECTTSSEEEEEEECSSCCEEEE
T ss_pred C----------CEEEEEECCCCeEEEE----------EecC----------CCccceEECCCCCEEEEEecCcCCCcEEE
Confidence 2 5699999887543211 1000 12235689999998887765445678888
Q ss_pred EECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 473 VNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 473 vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
+|+.+++...............++++++.+++..+.. ..+.+.++.++
T Consensus 229 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d---~~v~v~d~~~~ 276 (391)
T 1l0q_A 229 IDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFX---NTVSVIDTATN 276 (391)
T ss_dssp EETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTT---TEEEEEETTTT
T ss_pred EECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCC---CEEEEEECCCC
Confidence 9999887766555444455567899999887766433 45777776543
No 188
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.66 E-value=3.8e-15 Score=158.35 Aligned_cols=229 Identities=14% Similarity=0.222 Sum_probs=130.6
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..++.....+ ...|.||++||++.......+ ...+...||.|+++|+||.| .+.. +.......
T Consensus 23 ~g~~l~~~~~g~------~~g~~vvllHG~~~~~~~~~~---~~~~~~~~~~vi~~D~~G~G---~S~~---~~~~~~~~ 87 (317)
T 1wm1_A 23 DGHRIYWELSGN------PNGKPAVFIHGGPGGGISPHH---RQLFDPERYKVLLFDQRGCG---RSRP---HASLDNNT 87 (317)
T ss_dssp SSCEEEEEEEEC------TTSEEEEEECCTTTCCCCGGG---GGGSCTTTEEEEEECCTTST---TCBS---TTCCTTCS
T ss_pred CCcEEEEEEcCC------CCCCcEEEECCCCCcccchhh---hhhccccCCeEEEECCCCCC---CCCC---Cccccccc
Confidence 556665444332 123669999997754322112 23344579999999999954 4321 11112234
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh--------------------h
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL--------------------M 711 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~--------------------~ 711 (826)
..++.+.+..+++. ++.+++.|+||||||.+++.+|.++|++++++|+.++...... +
T Consensus 88 ~~~~~~dl~~l~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (317)
T 1wm1_A 88 TWHLVADIERLREM--AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTLRKQRLHWYYQDGASRFFPEKWERV 165 (317)
T ss_dssp HHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCHHHHHHHHTSSGGGTSHHHHHHH
T ss_pred HHHHHHHHHHHHHH--cCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccCCCchhhhhHHhhccchhhcHHHHHHH
Confidence 56666666666665 3457899999999999999999999999999999876432100 0
Q ss_pred ccCCCCCCc-----hhhhhccCc-----------------CCccCCCCC------Chhh---HH----HHh------hcC
Q 003363 712 VGTTDIPDW-----CYVESYGSK-----------------GKDSFTESP------SVED---LT----RFH------SKS 750 (826)
Q Consensus 712 ~~~~~~~~~-----~~~~~~~~~-----------------~~~~~~~~~------~~~~---~~----~~~------~~s 750 (826)
......... .+....... ........+ .... .. .+. ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (317)
T 1wm1_A 166 LSILSDDERKDVIAAYRQRLTSADPQVQLEAAKLWSVWEGETVTLLPSRESASFGEDDFALAFARIENHYFTHLGFLESD 245 (317)
T ss_dssp HTTSCTTGGGCHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTSSSSCCGGGGGGGCHHHHHHHHHHHHHHHHTGGGCSST
T ss_pred HhhccchhhcchHHHHHhhhcCCCccccccccccccccccchhhccCCcccccccccchhhhHHHhhhhhhhcccccccc
Confidence 000000000 000000000 000000000 0000 00 000 001
Q ss_pred --cccccCCCC-CcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 003363 751 --PISHISKVK-TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 821 (826)
Q Consensus 751 --p~~~~~~i~-~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~ 821 (826)
....+.+++ +|+|+++|++|..+|+..+..+.+.+.+ .++++++++||....++...++...+.+|+
T Consensus 246 ~~~~~~~~~i~~~P~lii~G~~D~~~~~~~~~~l~~~~p~----~~~~~i~~~gH~~~~~~~~~~~~~~i~~f~ 315 (317)
T 1wm1_A 246 DQLLRNVPLIRHIPAVIVHGRYDMACQVQNAWDLAKAWPE----AELHIVEGAGHSYDEPGILHQLMIATDRFA 315 (317)
T ss_dssp THHHHTGGGGTTSCEEEEEETTCSSSCHHHHHHHHHHCTT----SEEEEETTCCSSTTSHHHHHHHHHHHHHHT
T ss_pred hhhHhhcccccCCCEEEEEecCCCCCCHHHHHHHHhhCCC----ceEEEECCCCCCCCCcchHHHHHHHHHHHh
Confidence 123455674 9999999999999999998888887754 689999999997743322334445555554
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.66 E-value=2.1e-15 Score=179.30 Aligned_cols=267 Identities=9% Similarity=0.111 Sum_probs=167.7
Q ss_pred eCCCCCeEEEEecCCCC-CCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccC
Q 003363 161 PSPSGSKLLVVRNPENE-SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSL 238 (826)
Q Consensus 161 ~SPdG~~la~~~~~~~~-~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~ 238 (826)
++|||++++|+++.++. ...+|.+. .+++.+.+++...-..+. ...+..++|||||++|||.+.+.
T Consensus 79 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~---~~~~~~~~~SPDg~~la~~~~~~--------- 146 (710)
T 2xdw_A 79 HFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDG---TVALRGYAFSEDGEYFAYGLSAS--------- 146 (710)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTS---CEEEEEEEECTTSSEEEEEEEET---------
T ss_pred CEEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCC---CEEEEEEEECCCCCEEEEEEcCC---------
Confidence 34999999999876532 23667776 456666666543211110 01237899999999999997654
Q ss_pred CCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEee
Q 003363 239 GSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGW 318 (826)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~ 318 (826)
|. ....|+++|+++|+...+ +.....+..++|||||+. |+|++.
T Consensus 147 -------------------------G~-----~~~~i~v~d~~tg~~~~~--~~~~~~~~~~~wspDg~~----l~~~~~ 190 (710)
T 2xdw_A 147 -------------------------GS-----DWVTIKFMKVDGAKELPD--VLERVKFSCMAWTHDGKG----MFYNAY 190 (710)
T ss_dssp -------------------------TC-----SCEEEEEEETTTTEEEEE--EEEEECSCCEEECTTSSE----EEEEEC
T ss_pred -------------------------CC-----ceEEEEEEECCCCCCCcc--cccCcccceEEEEeCCCE----EEEEEE
Confidence 11 235899999999998765 222223567999999999 999875
Q ss_pred cCcce-eeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc--eecCCC---CccccCceecCCCCEEEEEecc
Q 003363 319 SSETR-KLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTES---ISSAFFPRFSPDGKFLVFLSAK 392 (826)
Q Consensus 319 ~~~~~-~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~Lt~~---~~~~~~p~~SpDG~~l~f~s~~ 392 (826)
..... ..+.....++...||++++ .+++. +.+... ......+.|||||++|++.+.+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~l-----------------~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 253 (710)
T 2xdw_A 191 PQQDGKSDGTETSTNLHQKLYYHVL-----------------GTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIRE 253 (710)
T ss_dssp CCCSSCCSSSCCCCCCCCEEEEEET-----------------TSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred CCccccccccccccCCCCEEEEEEC-----------------CCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEc
Confidence 43210 0011111234567999998 44442 233222 2335689999999999999875
Q ss_pred CCCCCCCCcccceEEEEeCCC------CC--CCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEe
Q 003363 393 SSVDSGAHSATDSLHRIDWPT------NG--NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 464 (826)
Q Consensus 393 ~~~~~g~~~~~~~l~~~d~~~------~~--~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~ 464 (826)
.. ....+||++|+.+ +. .+.++... + .....|++||+.|++.+..
T Consensus 254 ~~------~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~-----------~----------~~~~~~s~dg~~l~~~s~~ 306 (710)
T 2xdw_A 254 GC------DPVNRLWYCDLQQESNGITGILKWVKLIDNF-----------E----------GEYDYVTNEGTVFTFKTNR 306 (710)
T ss_dssp SS------SSCCEEEEEEGGGSSSSSCSSCCCEEEECSS-----------S----------SCEEEEEEETTEEEEEECT
T ss_pred cC------CCccEEEEEECcccccccCCccceEEeeCCC-----------C----------cEEEEEeccCCEEEEEECC
Confidence 41 1147899999876 32 11111100 0 0122589999999998765
Q ss_pred CC-eEEEEEEECCCCc---EEEecCCCC--CeeeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 003363 465 GS-SQVIISVNVSSGE---LLRITPAES--NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 465 ~~-~~~l~~vdl~tg~---~~~lt~~~~--~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
++ ...|+.+|+++++ .+.|+.... .+....++ +++.+++..... .-.+|++.++.
T Consensus 307 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~~-g~~~l~~~~~~ 367 (710)
T 2xdw_A 307 HSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLHD-VKNTLQLHDLA 367 (710)
T ss_dssp TCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEET-TEEEEEEEETT
T ss_pred CCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEEC-CEEEEEEEECC
Confidence 53 6789999998875 466766543 23333444 467777766543 33568877763
No 190
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.66 E-value=4.6e-16 Score=160.23 Aligned_cols=215 Identities=15% Similarity=0.090 Sum_probs=132.5
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC-C
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN-P 670 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d-~ 670 (826)
.|.||++||.+.+ ...|...+..|+++||.|+++|+||.|.+.... .....+++..+.+..+++. ++ .
T Consensus 3 ~~~vvllHG~~~~--~~~w~~~~~~L~~~g~~via~Dl~G~G~S~~~~-------~~~~~~~~~a~dl~~~l~~--l~~~ 71 (257)
T 3c6x_A 3 FAHFVLIHTICHG--AWIWHKLKPLLEALGHKVTALDLAASGVDPRQI-------EEIGSFDEYSEPLLTFLEA--LPPG 71 (257)
T ss_dssp CCEEEEECCTTCC--GGGGTTHHHHHHHTTCEEEEECCTTSTTCSCCG-------GGCCSHHHHTHHHHHHHHT--SCTT
T ss_pred CCcEEEEcCCccC--cCCHHHHHHHHHhCCCEEEEeCCCCCCCCCCCc-------ccccCHHHHHHHHHHHHHh--cccc
Confidence 3679999997654 456888899999999999999999954432110 1113456666555555554 32 3
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccch-h--------hhccCCCCCCchh--hhhcc------------
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNL-A--------LMVGTTDIPDWCY--VESYG------------ 727 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~-~--------~~~~~~~~~~~~~--~~~~~------------ 727 (826)
+++.|+||||||.+++.++.++|++++++|+.++.... . .+... .+.|.. ...+.
T Consensus 72 ~~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (257)
T 3c6x_A 72 EKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEV--FPDWKDTTYFTYTKDGKEITGLKLG 149 (257)
T ss_dssp CCEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHH--SCCCTTCEEEEEEETTEEEEEEECC
T ss_pred CCeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhc--CcchhhhhhhhccCCCCcccccccc
Confidence 68999999999999999999999999999988764210 0 00000 000000 00000
Q ss_pred CcCC-ccCCCCCChhhHHHHh-hcCc-------------ccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCE
Q 003363 728 SKGK-DSFTESPSVEDLTRFH-SKSP-------------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVET 792 (826)
Q Consensus 728 ~~~~-~~~~~~~~~~~~~~~~-~~sp-------------~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~ 792 (826)
.... ..+......+...... ...+ .......++|+|+++|++|..+|+..++.+.+.+.. .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~~----~ 225 (257)
T 3c6x_A 150 FTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP----D 225 (257)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCCCTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCC----S
T ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCccchhhhccccccChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCCC----C
Confidence 0000 0000000111111100 0011 000011268999999999999999998888877753 6
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 793 KVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 793 ~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
+++++|++||....+.. .++.+.+.+|++++
T Consensus 226 ~~~~i~~~gH~~~~e~P-~~~~~~l~~f~~~~ 256 (257)
T 3c6x_A 226 KVYKVEGGDHKLQLTKT-KEIAEILQEVADTY 256 (257)
T ss_dssp EEEECCSCCSCHHHHSH-HHHHHHHHHHHHHC
T ss_pred eEEEeCCCCCCcccCCH-HHHHHHHHHHHHhc
Confidence 89999999998764443 47888899998754
No 191
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.66 E-value=1.2e-16 Score=172.88 Aligned_cols=225 Identities=12% Similarity=0.126 Sum_probs=133.0
Q ss_pred CCCcEEEEEcCCCCCCCC---ccch-----------HHHHHHHHCCcEEEEECCCCCCCCchhhhhcCC--CCCC-cchH
Q 003363 590 SCDPLIVVLHGGPHSVSL---SSYS-----------KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP--GKVG-SQDV 652 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~---~~~~-----------~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~--~~~~-~~~~ 652 (826)
++.|+||++||++..... ..|. ..+..|+++||.|+++|+||.+........... ..+. ...+
T Consensus 48 ~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 127 (354)
T 2rau_A 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWI 127 (354)
T ss_dssp CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHH
T ss_pred CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHH
Confidence 346899999997755210 0222 677889999999999999995433211100000 0111 2236
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhC-CCceeEEEecCCccchhhhccCC----------------
Q 003363 653 NDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLALMVGTT---------------- 715 (826)
Q Consensus 653 ~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~~~~~~~---------------- 715 (826)
+|+.++++++.++ .+.+++.|+|||+||.+++.++.++ |++++++|+.++...........
T Consensus 128 ~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (354)
T 2rau_A 128 SDIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPTKHGIRPKFYTPEVNSIEEMEAKGI 205 (354)
T ss_dssp HHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESCSCBCTTCC--CCCCSCSSHHHHHHHTC
T ss_pred HHHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecccccccCcccchhhhhhhhHHHhhhhcc
Confidence 7888888888776 3457899999999999999999998 99999999986532210000000
Q ss_pred -------CCC------------------------CchhhhhccCcCCccCC-CCCChhhH-HHH------------hhcC
Q 003363 716 -------DIP------------------------DWCYVESYGSKGKDSFT-ESPSVEDL-TRF------------HSKS 750 (826)
Q Consensus 716 -------~~~------------------------~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~------------~~~s 750 (826)
... .|.....+.......+. ........ ..+ ...+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (354)
T 2rau_A 206 YVIPSRGGPNNPIWSYALANPDMPSPDPKYKSISDFLMDSLYVTGSANPYDYPYSKKEDMFPILASFDPYWPYRLSLERD 285 (354)
T ss_dssp CEEECSSSTTCTHHHHHHHSTTSCCSSTTSSSHHHHHHHHHHHTTSCCTTSTTCCCHHHHHHHHHTSCSEEEHHHHHTTT
T ss_pred cccCCCchhhhHHHHHhccccccCccccchhhHHHHHHHhhhccccCCcccCCCccHHHHHHHHhhhccccccccccCcc
Confidence 000 00000000000000000 00001111 111 1123
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCC--CCCHHHHHHHHHHHHHHH
Q 003363 751 PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER--PQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 751 p~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~--~~~~~~~~~~i~~w~~~~ 824 (826)
....+.++++|+|+++|++|.++|. .+ +.+ ....++++++++||.... ++...++...+.+||+++
T Consensus 286 ~~~~l~~i~~P~Lii~G~~D~~~p~-~~----~~l---~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~ 353 (354)
T 2rau_A 286 LKFDYEGILVPTIAFVSERFGIQIF-DS----KIL---PSNSEIILLKGYGHLDVYTGENSEKDVNSVVLKWLSQQ 353 (354)
T ss_dssp CCCCCTTCCCCEEEEEETTTHHHHB-CG----GGS---CTTCEEEEETTCCGGGGTSSTTHHHHTHHHHHHHHHHH
T ss_pred cccccccCCCCEEEEecCCCCCCcc-ch----hhh---ccCceEEEcCCCCCchhhcCCCcHHHHHHHHHHHHHhc
Confidence 3445678999999999999987653 22 222 235799999999997643 344568899999999875
No 192
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.66 E-value=1.3e-16 Score=165.78 Aligned_cols=219 Identities=15% Similarity=0.113 Sum_probs=133.3
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCc
Q 003363 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSK 672 (826)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~r 672 (826)
|+||++||.+.. ...|...+..|++ +|.|+++|+||.|.+... ... ......+++..+.+..+++. ++.++
T Consensus 21 ~~vvllHG~~~~--~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~---~~~-~~~~~~~~~~a~dl~~~l~~--l~~~~ 91 (271)
T 1wom_A 21 ASIMFAPGFGCD--QSVWNAVAPAFEE-DHRVILFDYVGSGHSDLR---AYD-LNRYQTLDGYAQDVLDVCEA--LDLKE 91 (271)
T ss_dssp SEEEEECCTTCC--GGGGTTTGGGGTT-TSEEEECCCSCCSSSCCT---TCC-TTGGGSHHHHHHHHHHHHHH--TTCSC
T ss_pred CcEEEEcCCCCc--hhhHHHHHHHHHh-cCeEEEECCCCCCCCCCC---ccc-ccccccHHHHHHHHHHHHHH--cCCCC
Confidence 789999996654 4467666777765 799999999995443211 000 01112345555444444544 34578
Q ss_pred EEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh----hccCCCCCCc-hhhhhccCc-------CCc-cCCCCCC
Q 003363 673 VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL----MVGTTDIPDW-CYVESYGSK-------GKD-SFTESPS 739 (826)
Q Consensus 673 v~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~----~~~~~~~~~~-~~~~~~~~~-------~~~-~~~~~~~ 739 (826)
+.|+||||||.+++.++.++|++++++|+.++...... .......... ......... ... .+.....
T Consensus 92 ~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (271)
T 1wom_A 92 TVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQPDR 171 (271)
T ss_dssp EEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCTTC
T ss_pred eEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999887421100 0000000000 000000000 000 0000000
Q ss_pred hhhHHH-------------------HhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCC
Q 003363 740 VEDLTR-------------------FHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPND 800 (826)
Q Consensus 740 ~~~~~~-------------------~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~ 800 (826)
.+..+. ....+....+.++++|+|+++|++|..+|++.++.+.+.+.+ .++++++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~----~~~~~i~~~ 247 (271)
T 1wom_A 172 PEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKVTVPSLILQCADDIIAPATVGKYMHQHLPY----SSLKQMEAR 247 (271)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTCCSCEEEEEEETCSSSCHHHHHHHHHHSSS----EEEEEEEEE
T ss_pred hHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhccccCCCEEEEEcCCCCcCCHHHHHHHHHHCCC----CEEEEeCCC
Confidence 000000 011122335678999999999999999999888877776653 799999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 801 VHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 801 ~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
||...... ..++.+.+.+|+++++
T Consensus 248 gH~~~~e~-p~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 248 GHCPHMSH-PDETIQLIGDYLKAHV 271 (271)
T ss_dssp SSCHHHHC-HHHHHHHHHHHHHHHC
T ss_pred CcCccccC-HHHHHHHHHHHHHhcC
Confidence 99865433 4578899999998874
No 193
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.66 E-value=5.4e-16 Score=163.17 Aligned_cols=227 Identities=11% Similarity=0.022 Sum_probs=137.6
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCc
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGS 649 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~ 649 (826)
.-+|..++..... ..|+||++||++.. ...|...+..|+++ |.|+++|+||.+..... ...
T Consensus 16 ~~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~L~~~-~~vi~~D~~G~G~S~~~--------~~~ 76 (301)
T 3kda_A 16 EVDGVKLHYVKGG--------QGPLVMLVHGFGQT--WYEWHQLMPELAKR-FTVIAPDLPGLGQSEPP--------KTG 76 (301)
T ss_dssp EETTEEEEEEEEE--------SSSEEEEECCTTCC--GGGGTTTHHHHTTT-SEEEEECCTTSTTCCCC--------SSC
T ss_pred eeCCeEEEEEEcC--------CCCEEEEECCCCcc--hhHHHHHHHHHHhc-CeEEEEcCCCCCCCCCC--------CCC
Confidence 3356777655442 34789999998765 45677788888887 99999999995443211 123
Q ss_pred chHHHHHHHHHHHHHcCCCCCCc-EEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccC------CCCCCchh
Q 003363 650 QDVNDVLTAIDHVIDMGLANPSK-VTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGT------TDIPDWCY 722 (826)
Q Consensus 650 ~~~~D~~~~i~~l~~~~~~d~~r-v~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~------~~~~~~~~ 722 (826)
..++++.+.+..+++. ++.++ +.|+|||+||.+++.++.++|++++++|+.+|.......... .....|..
T Consensus 77 ~~~~~~~~~l~~~l~~--l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (301)
T 3kda_A 77 YSGEQVAVYLHKLARQ--FSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTAQGESLVWHF 154 (301)
T ss_dssp SSHHHHHHHHHHHHHH--HCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSCCSSGGGGGSBSEETTEECSSTHH
T ss_pred ccHHHHHHHHHHHHHH--cCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccCCCCCCccchhhhcchhhhhhhhH
Confidence 3456666666555554 23456 999999999999999999999999999999985321110000 00001100
Q ss_pred h---------hhccC--------cCCccCCC---CCChhhHHHHhh-------------------------cCcccccCC
Q 003363 723 V---------ESYGS--------KGKDSFTE---SPSVEDLTRFHS-------------------------KSPISHISK 757 (826)
Q Consensus 723 ~---------~~~~~--------~~~~~~~~---~~~~~~~~~~~~-------------------------~sp~~~~~~ 757 (826)
. ..... ........ ....+....+.. ......+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 234 (301)
T 3kda_A 155 SFFAADDRLAETLIAGKERFFLEHFIKSHASNTEVFSERLLDLYARSYAKPHSLNASFEYYRALNESVRQNAELAKTRLQ 234 (301)
T ss_dssp HHHHCSTTHHHHHHTTCHHHHHHHHHHHTCSSGGGSCHHHHHHHHHHHTSHHHHHHHHHHHHTHHHHHHHHHHHTTSCBC
T ss_pred HHhhcCcchHHHHhccchHHHHHHHHHhccCCcccCCHHHHHHHHHHhccccccchHHHHHHhhccchhhcccchhhccc
Confidence 0 00000 00000000 001111111100 000112338
Q ss_pred CCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 758 VKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 758 i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
+++|+|+++|++| +++.....+.+.+ .++++++++++||.+.... ..++.+.|.+|+++.
T Consensus 235 i~~P~l~i~G~~D--~~~~~~~~~~~~~----~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~~l~~~ 294 (301)
T 3kda_A 235 MPTMTLAGGGAGG--MGTFQLEQMKAYA----EDVEGHVLPGCGHWLPEEC-AAPMNRLVIDFLSRG 294 (301)
T ss_dssp SCEEEEEECSTTS--CTTHHHHHHHTTB----SSEEEEEETTCCSCHHHHT-HHHHHHHHHHHHTTS
T ss_pred cCcceEEEecCCC--CChhHHHHHHhhc----ccCeEEEcCCCCcCchhhC-HHHHHHHHHHHHhhC
Confidence 8999999999999 6666665554443 4589999999999875433 447888888888764
No 194
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.65 E-value=3.3e-15 Score=157.18 Aligned_cols=228 Identities=16% Similarity=0.186 Sum_probs=133.9
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..++....- ..|.||++||.+.+ ...|...+..|++. |.|+++|+||. |.+... .........
T Consensus 17 ~g~~l~y~~~G--------~g~~lvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~G~---G~S~~~-~~~~~~~~~ 81 (294)
T 1ehy_A 17 PDVKIHYVREG--------AGPTLLLLHGWPGF--WWEWSKVIGPLAEH-YDVIVPDLRGF---GDSEKP-DLNDLSKYS 81 (294)
T ss_dssp SSCEEEEEEEE--------CSSEEEEECCSSCC--GGGGHHHHHHHHTT-SEEEEECCTTS---TTSCCC-CTTCGGGGC
T ss_pred CCEEEEEEEcC--------CCCEEEEECCCCcc--hhhHHHHHHHHhhc-CEEEecCCCCC---CCCCCC-ccccccCcC
Confidence 45666554332 23679999998765 56788888888776 99999999994 444211 000001234
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccc-hh-hhcc-CCCCCCchh------
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCN-LA-LMVG-TTDIPDWCY------ 722 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~-~~-~~~~-~~~~~~~~~------ 722 (826)
++++.+.+..+++. +..+++.|+||||||.+++.+|.++|++++++|+.++... .. .... ......|..
T Consensus 82 ~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
T 1ehy_A 82 LDKAADDQAALLDA--LGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFGPVYFGLGHVHESWYSQFHQLD 159 (294)
T ss_dssp HHHHHHHHHHHHHH--TTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECCSCTTC-----------CCHHHHHTTCH
T ss_pred HHHHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecCCCCCcchhhccchhccCceEEEecCcc
Confidence 66666666666665 3457899999999999999999999999999999986321 10 0000 000001100
Q ss_pred -hhhc--cCc---------CCcc-CC--CCCChhhHHHHh-----------------hc--Cccc-----ccCCCCCcEE
Q 003363 723 -VESY--GSK---------GKDS-FT--ESPSVEDLTRFH-----------------SK--SPIS-----HISKVKTPTI 763 (826)
Q Consensus 723 -~~~~--~~~---------~~~~-~~--~~~~~~~~~~~~-----------------~~--sp~~-----~~~~i~~PvL 763 (826)
.... ... .... .. .....+..+.+. .. .... .+.++++|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~L 239 (294)
T 1ehy_A 160 MAVEVVGSSREVCKKYFKHFFDHWSYRDELLTEEELEVHVDNCMKPDNIHGGFNYYRANIRPDAALWTDLDHTMSDLPVT 239 (294)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHTSSSSCCSCHHHHHHHHHHHTSTTHHHHHHHHHHHHSSSSCCCCCTGGGSCBCSCEE
T ss_pred hhHHHhccchhHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHhcCCcccchHHHHHHHHHhhhhhhcCCcccCcCCCCEE
Confidence 0000 000 0000 00 000111111110 00 0001 2337899999
Q ss_pred EEEeCCCCCCCc-HHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 003363 764 FLLGAQDLRVPV-SNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 821 (826)
Q Consensus 764 ii~G~~D~~vp~-~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~ 821 (826)
+++|++|..+|. .....+.+.+. ..+++++|++||....+. ..++.+.|.+||
T Consensus 240 vi~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl 293 (294)
T 1ehy_A 240 MIWGLGDTCVPYAPLIEFVPKYYS----NYTMETIEDCGHFLMVEK-PEIAIDRIKTAF 293 (294)
T ss_dssp EEEECCSSCCTTHHHHHHHHHHBS----SEEEEEETTCCSCHHHHC-HHHHHHHHHHHC
T ss_pred EEEeCCCCCcchHHHHHHHHHHcC----CCceEEeCCCCCChhhhC-HHHHHHHHHHHh
Confidence 999999999884 45555544433 489999999999865443 346777777775
No 195
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.65 E-value=9.4e-14 Score=149.61 Aligned_cols=283 Identities=6% Similarity=-0.023 Sum_probs=171.2
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (826)
....||||+++.+.... .... .....++.++. .+++.......+ ......+|||||+++++....+ ..
T Consensus 45 ~~~~s~dg~~l~~~~~~-~~~~-~~~~~v~~~d~--~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~v~~~~~---~~ 112 (353)
T 3vgz_A 45 EMAYSQQENALWLATSQ-SRKL-DKGGVVYRLDP--VTLEVTQAIHND-----LKPFGATINNTTQTLWFGNTVN---SA 112 (353)
T ss_dssp EEEEETTTTEEEEEECC-CTTT-EESEEEEEECT--TTCCEEEEEEES-----SCCCSEEEETTTTEEEEEETTT---TE
T ss_pred ceEECCCCCEEEEEcCC-CcCC-CCCccEEEEcC--CCCeEEEEEecC-----CCcceEEECCCCCEEEEEecCC---CE
Confidence 34558999988554322 1111 12456777664 333332221111 2366789999999887765532 24
Q ss_pred EEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCccee
Q 003363 181 QFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (826)
Q Consensus 181 ~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (826)
++.++ ..++....+.................++.|||||++|++....
T Consensus 113 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------------------------- 161 (353)
T 3vgz_A 113 VTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG------------------------------- 161 (353)
T ss_dssp EEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-------------------------------
T ss_pred EEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-------------------------------
Confidence 55555 4556555555432210000000012568999999988776421
Q ss_pred ecCCCccCCCccCceEEEEEccCCceEeccCCC-CCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceE
Q 003363 260 EEDWGETYAGKRQPSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 338 (826)
Q Consensus 260 ~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~-~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~ 338 (826)
....|+++|+++++.... .+ ....+..++|+|||+. |++.. ....|+
T Consensus 162 -----------~~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~s~dg~~----l~~~~---------------~~~~i~ 209 (353)
T 3vgz_A 162 -----------KESVIWVVDGGNIKLKTA--IQNTGKMSTGLALDSEGKR----LYTTN---------------ADGELI 209 (353)
T ss_dssp -----------SSCEEEEEETTTTEEEEE--ECCCCTTCCCCEEETTTTE----EEEEC---------------TTSEEE
T ss_pred -----------CCceEEEEcCCCCceEEE--ecCCCCccceEEECCCCCE----EEEEc---------------CCCeEE
Confidence 135799999999887655 33 2334678899999997 76654 234788
Q ss_pred EEEcccccchhhhhhhhcCCCCCCcce-ecCC----CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCC
Q 003363 339 AVRVSLYKSEASELELKESSSEDLPVV-NLTE----SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 413 (826)
Q Consensus 339 ~~d~~~~~~~~~~~~~~~~~~~~~~~~-~Lt~----~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~ 413 (826)
.+|+ .+++.. .+.. .........|+|||++|+..... ...|+++|+.+
T Consensus 210 ~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------~~~v~~~d~~~ 262 (353)
T 3vgz_A 210 TIDT-----------------ADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK----------AAEVLVVDTRN 262 (353)
T ss_dssp EEET-----------------TTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS----------SSEEEEEETTT
T ss_pred EEEC-----------------CCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC----------CCEEEEEECCC
Confidence 9998 555443 2222 12234457999999988655432 25799999877
Q ss_pred CCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeE
Q 003363 414 NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWS 493 (826)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~ 493 (826)
++... .+..+ ....+.|+|||+.+|++.. ....|+.+|+.+++..............
T Consensus 263 ~~~~~----------~~~~~-----------~~~~~~~s~dg~~l~v~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 319 (353)
T 3vgz_A 263 GNILA----------KVAAP-----------ESLAVLFNPARNEAYVTHR--QAGKVSVIDAKSYKVVKTFDTPTHPNSL 319 (353)
T ss_dssp CCEEE----------EEECS-----------SCCCEEEETTTTEEEEEET--TTTEEEEEETTTTEEEEEEECCSEEEEE
T ss_pred CcEEE----------EEEcC-----------CCceEEECCCCCEEEEEEC--CCCeEEEEECCCCeEEEEEecCCCCCeE
Confidence 55321 11110 1235789999998877643 3346888899988877655444444556
Q ss_pred EEeecCCEEEEEEeC
Q 003363 494 LLTLDGDNIIAVSSS 508 (826)
Q Consensus 494 ~~s~dg~~l~~~~s~ 508 (826)
.|+++|+.+++...+
T Consensus 320 ~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 320 ALSADGKTLYVSVKQ 334 (353)
T ss_dssp EECTTSCEEEEEEEC
T ss_pred EEcCCCCEEEEEEcc
Confidence 789999988877765
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.65 E-value=1.1e-15 Score=164.72 Aligned_cols=248 Identities=11% Similarity=0.052 Sum_probs=156.5
Q ss_pred ccEEEEeCCCCCeEEEEecCCC-----CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeec
Q 003363 155 GASAVVPSPSGSKLLVVRNPEN-----ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 228 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~-----~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~ 228 (826)
.+..|++ ||++|||+....+ ....++.+. .+++.+++ ... ..+.|||||++|||.+.+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~----------~~~~~SpDg~~la~~~~~ 79 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENA----------TMPRISPDGKKIAFMRAN 79 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESC----------EEEEECTTSSEEEEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccC----------CCeEECCCCCEEEEEEec
Confidence 4677888 9999999864321 133566655 45554444 223 689999999999998764
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCC
Q 003363 229 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 308 (826)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~ 308 (826)
.. ....+||++|+++|+.+.+. .... +..+.|||||+.
T Consensus 80 ~~---------------------------------------~~~~~l~~~~~~~g~~~~l~--~~~~-~~~~~wspdg~~ 117 (347)
T 2gop_A 80 EE---------------------------------------KKVSEIWVADLETLSSKKIL--EAKN-IRSLEWNEDSRK 117 (347)
T ss_dssp TT---------------------------------------TTEEEEEEEETTTTEEEEEE--EESE-EEEEEECTTSSE
T ss_pred cC---------------------------------------CCcceEEEEECCCCceEEEE--cCCC-ccceeECCCCCE
Confidence 31 02367999999999988883 3333 788999999999
Q ss_pred CccEEEEEeecCcce-------e-----eeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc-eecCCCCcccc
Q 003363 309 LHQYLVFVGWSSETR-------K-----LGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTESISSAF 375 (826)
Q Consensus 309 ~~~~lvf~~~~~~~~-------~-----~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt~~~~~~~ 375 (826)
|+|.+...... + .|..+.......||++|+ .+++. +.|+. . ...
T Consensus 118 ----l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~-----------------~~~~~~~~l~~-~-~~~ 174 (347)
T 2gop_A 118 ----LLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT-----------------ESEEVIEEFEK-P-RFS 174 (347)
T ss_dssp ----EEEEEECCCC---------CCCC---------CEEEEEEEET-----------------TTTEEEEEEEE-E-TTC
T ss_pred ----EEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC-----------------CCCeEEeeecC-C-Ccc
Confidence 99987431000 0 010011112357999998 77777 77776 4 678
Q ss_pred CceecCCCCEEEEEeccCCCCCCCCcc-cceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccC
Q 003363 376 FPRFSPDGKFLVFLSAKSSVDSGAHSA-TDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 454 (826)
Q Consensus 376 ~p~~SpDG~~l~f~s~~~~~~~g~~~~-~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~D 454 (826)
.+.||||| |+|.+...... .... ..+||.+| +++.+.++.. . . ...++||
T Consensus 175 ~~~~spdg--~~~~~~~~~~~--~~~~~~~~l~~~d--~~~~~~l~~~-~--------------------~--~~~~spd 225 (347)
T 2gop_A 175 SGIWHRDK--IVVNVPHREII--PQYFKFWDIYIWE--DGKEEKMFEK-V--------------------S--FYAVDSD 225 (347)
T ss_dssp EEEEETTE--EEEEEECCCSS--CCSSCCEEEEEEE--TTEEEEEEEE-E--------------------S--EEEEEEC
T ss_pred cccCCCCe--EEEEEeccccc--ccccccccEEEeC--CCceEEeccC-c--------------------c--eeeECCC
Confidence 89999999 77777543100 0001 45899998 4433222211 0 0 1124899
Q ss_pred CCEEEEEEEeC-----CeEEEEEEECCCCcEEEecCCC-CCeee-EEEeecCCEEEEEEeCCCCCCeEEEEe
Q 003363 455 GCTMLLSSIWG-----SSQVIISVNVSSGELLRITPAE-SNFSW-SLLTLDGDNIIAVSSSPVDVPQVKYGY 519 (826)
Q Consensus 455 g~~l~~~~~~~-----~~~~l~~vdl~tg~~~~lt~~~-~~~~~-~~~s~dg~~l~~~~s~~~~p~~l~~~~ 519 (826)
|+.|++.+... ....||.+| +++.++++... ..+.. ..|+ |+ +++...... -.+|| .+
T Consensus 226 g~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~-~~~l~-~~ 290 (347)
T 2gop_A 226 GERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEG-SVNLY-IW 290 (347)
T ss_dssp SSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEEETT-EEEEE-EE
T ss_pred CCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc--EEEEEecCC-cEEEE-Ec
Confidence 99998887543 246899999 78888887763 33332 5677 65 666554433 34566 55
No 197
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.65 E-value=3.3e-16 Score=164.26 Aligned_cols=226 Identities=15% Similarity=0.072 Sum_probs=138.4
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..++...+. +.|+||++||.+.. ...|...+..|++ +|.|+++|+||.+. +..... .......
T Consensus 16 ~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~l~~-~~~vi~~D~~G~G~---S~~~~~-~~~~~~~ 80 (297)
T 2qvb_A 16 AGKRMAYIDEG--------KGDAIVFQHGNPTS--SYLWRNIMPHLEG-LGRLVACDLIGMGA---SDKLSP-SGPDRYS 80 (297)
T ss_dssp TTEEEEEEEES--------SSSEEEEECCTTCC--GGGGTTTGGGGTT-SSEEEEECCTTSTT---SCCCSS-CSTTSSC
T ss_pred CCEEEEEEecC--------CCCeEEEECCCCch--HHHHHHHHHHHhh-cCeEEEEcCCCCCC---CCCCCC-ccccCcC
Confidence 56666654432 24899999997765 3456666667765 59999999999543 321100 0111135
Q ss_pred HHHHHHHHHHHHHcCCCCC-CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCC----------CCCC-
Q 003363 652 VNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTT----------DIPD- 719 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~-~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~----------~~~~- 719 (826)
.+++.+.+..+++. ++. +++.|+|||+||.+++.++.++|++++++|+.+|........... ..+.
T Consensus 81 ~~~~~~~~~~~l~~--~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (297)
T 2qvb_A 81 YGEQRDFLFALWDA--LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWADWPPAVRGVFQGFRSPQG 158 (297)
T ss_dssp HHHHHHHHHHHHHH--TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHTSTTH
T ss_pred HHHHHHHHHHHHHH--cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccCCccCCCCChHHHHHHHHHhcccc
Confidence 66666666666655 345 789999999999999999999999999999998865311000000 0000
Q ss_pred c-------hhhhhccCcCCccCCCCCChhhHH------------------HHhhc--------------CcccccCCCCC
Q 003363 720 W-------CYVESYGSKGKDSFTESPSVEDLT------------------RFHSK--------------SPISHISKVKT 760 (826)
Q Consensus 720 ~-------~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~--------------sp~~~~~~i~~ 760 (826)
. .+...+... ........+... .+... +....+.++++
T Consensus 159 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~ 235 (297)
T 2qvb_A 159 EPMALEHNIFVERVLPG---AILRQLSDEEMNHYRRPFVNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDM 235 (297)
T ss_dssp HHHHHTTCHHHHTHHHH---TCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHHCCS
T ss_pred hhhhccccHHHHHHHhc---cccccCCHHHHHHHHHHhcCcccchhhHHHHHHhccccCCchhhHHHHHHHHhhcccccc
Confidence 0 000000000 000000001111 11111 11234567899
Q ss_pred cEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 761 PTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 761 PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
|+|+++|++|..+|++....+.+.+. . +++++ ++||.+... ...++.+.|.+||+++
T Consensus 236 P~lii~G~~D~~~~~~~~~~~~~~~~----~-~~~~~-~~gH~~~~~-~p~~~~~~i~~fl~~~ 292 (297)
T 2qvb_A 236 PKLFINAEPGAIITGRIRDYVRSWPN----Q-TEITV-PGVHFVQED-SPEEIGAAIAQFVRRL 292 (297)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHTSSS----E-EEEEE-EESSCGGGT-CHHHHHHHHHHHHHHH
T ss_pred cEEEEecCCCCcCCHHHHHHHHHHcC----C-eEEEe-cCccchhhh-CHHHHHHHHHHHHHHH
Confidence 99999999999999988776665543 3 78888 999986644 4558889999999875
No 198
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=3.3e-15 Score=178.40 Aligned_cols=270 Identities=12% Similarity=0.120 Sum_probs=170.3
Q ss_pred cEEEEeCCCCCeEEEEecCCCC-CCeEEEEe-c---CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCC
Q 003363 156 ASAVVPSPSGSKLLVVRNPENE-SPIQFELW-S---QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (826)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~-~~~~~~i~-~---~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~ 230 (826)
...+.++|||++++|+++.++. ...+|.+. . ++..+.+++...-..+. +..+.+++|||||++|||.+.+.
T Consensus 109 ~~~~~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~---~~~~~~~~~SPDG~~la~~~~~~- 184 (741)
T 1yr2_A 109 ERFGLPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDG---ATALDAWAASDDGRLLAYSVQDG- 184 (741)
T ss_dssp CEECCCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC-------EEEEEEEECTTSSEEEEEEEET-
T ss_pred cccCCCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCC---CEEEEeEEECCCCCEEEEEEcCC-
Confidence 3445667999999999976532 45677777 3 56667776643211110 01237899999999999987654
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCc
Q 003363 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 310 (826)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (826)
|. ....|+++|+++|+.... .........++|||| +.
T Consensus 185 ---------------------------------G~-----e~~~i~v~dl~tg~~~~~--~~~~~~~~~~~wspD-~~-- 221 (741)
T 1yr2_A 185 ---------------------------------GS-----DWRTVKFVGVADGKPLAD--ELKWVKFSGLAWLGN-DA-- 221 (741)
T ss_dssp ---------------------------------TC-----SEEEEEEEETTTCCEEEE--EEEEEESCCCEESTT-SE--
T ss_pred ---------------------------------CC-----ceEEEEEEECCCCCCCCc--cCCCceeccEEEECC-CE--
Confidence 11 236899999999987654 222223467899999 98
Q ss_pred cEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc--eecCCCC---ccccCceecCCCCE
Q 003363 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTESI---SSAFFPRFSPDGKF 385 (826)
Q Consensus 311 ~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~Lt~~~---~~~~~p~~SpDG~~ 385 (826)
|+|++..... +.+.....+++..||++++ .++.. +.+.... .....+.|||||++
T Consensus 222 --l~~~~~~~~~-~~~~~~~~~~~~~v~~~~l-----------------gt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~ 281 (741)
T 1yr2_A 222 --LLYSRFAEPK-EGQAFQALNYNQTVWLHRL-----------------GTPQSADQPVFATPELPKRGHGASVSSDGRW 281 (741)
T ss_dssp --EEEEECCCC---------CCCCCEEEEEET-----------------TSCGGGCEEEECCTTCTTCEEEEEECTTSCE
T ss_pred --EEEEEecCcc-cccccccCCCCCEEEEEEC-----------------CCCchhCEEEeccCCCCeEEEEEEECCCCCE
Confidence 9998754321 1111122344568999998 44432 2333222 23678999999999
Q ss_pred EEEEeccCCCCCCCCcccceEEEEeCCCC--C-CCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEE
Q 003363 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTN--G-NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 462 (826)
Q Consensus 386 l~f~s~~~~~~~g~~~~~~~l~~~d~~~~--~-~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~ 462 (826)
|+|.+.+.. ....+||++|+.++ + .+.++... + .. ...++|||+.|++.+
T Consensus 282 l~~~~~~~~------~~~~~l~~~d~~~~~~~~~~~l~~~~-----------~---------~~-~~~~~~dg~~l~~~s 334 (741)
T 1yr2_A 282 VVITSSEGT------DPVNTVHVARVTNGKIGPVTALIPDL-----------K---------AQ-WDFVDGVGDQLWFVS 334 (741)
T ss_dssp EEEEEECTT------CSCCEEEEEEEETTEECCCEEEECSS-----------S---------SC-EEEEEEETTEEEEEE
T ss_pred EEEEEEccC------CCcceEEEEECCCCCCcccEEecCCC-----------C---------ce-EEEEeccCCEEEEEE
Confidence 999987641 13568999998875 3 22222111 0 01 112568999999987
Q ss_pred EeCC-eEEEEEEECCCC--cEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 003363 463 IWGS-SQVIISVNVSSG--ELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 463 ~~~~-~~~l~~vdl~tg--~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
...+ ...|+.+|++++ +.+.+++..... ...++..++.+++...... -.+|++.++.
T Consensus 335 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~-l~~~~~~~~~lv~~~~~dg-~~~l~~~~~~ 394 (741)
T 1yr2_A 335 GDGAPLKKIVRVDLSGSTPRFDTVVPESKDN-LESVGIAGNRLFASYIHDA-KSQVLAFDLD 394 (741)
T ss_dssp CTTCTTCEEEEEECSSSSCEEEEEECCCSSE-EEEEEEEBTEEEEEEEETT-EEEEEEEETT
T ss_pred CCCCCCCEEEEEeCCCCccccEEEecCCCCe-EEEEEEECCEEEEEEEECC-EEEEEEEeCC
Confidence 7553 678999999884 577777654432 2345556777777765533 3568887753
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.65 E-value=3.5e-15 Score=176.86 Aligned_cols=269 Identities=13% Similarity=0.105 Sum_probs=168.6
Q ss_pred EEEEeCCCCCeEEEEecCCCC-CCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 003363 157 SAVVPSPSGSKLLVVRNPENE-SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (826)
Q Consensus 157 ~~~~~SPdG~~la~~~~~~~~-~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~ 234 (826)
..+.++|||++++|+++.++. ...+|.+. .+++.+.+++...-..+. +..+.+++|||||++|||.....
T Consensus 71 ~~~~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~---~~~~~~~~~SPDG~~la~~~~~~----- 142 (695)
T 2bkl_A 71 SVSTPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDG---TVSLGTWAVSWDGKKVAFAQKPN----- 142 (695)
T ss_dssp EECCCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSS---CEEEEEEEECTTSSEEEEEEEET-----
T ss_pred cCCCCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCC---CEEEEEEEECCCCCEEEEEECCC-----
Confidence 344566999999999876532 45677777 566777777653211110 01237899999999999987654
Q ss_pred CccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEE
Q 003363 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 314 (826)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lv 314 (826)
| .....|+++|+++|+..... .........++|||||+. |+
T Consensus 143 -----------------------------G-----~~~~~i~v~dl~tg~~~~~~-~~~~~~~~~~~wspDg~~----l~ 183 (695)
T 2bkl_A 143 -----------------------------A-----ADEAVLHVIDVDSGEWSKVD-VIEGGKYATPKWTPDSKG----FY 183 (695)
T ss_dssp -----------------------------T-----CSCCEEEEEETTTCCBCSSC-CBSCCTTCCCEECTTSSE----EE
T ss_pred -----------------------------C-----CceEEEEEEECCCCCCcCCc-ccCcccccceEEecCCCE----EE
Confidence 1 13478999999999875111 111222368999999999 99
Q ss_pred EEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc--eecCCC---CccccCceecCCCCEEEEE
Q 003363 315 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTES---ISSAFFPRFSPDGKFLVFL 389 (826)
Q Consensus 315 f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~Lt~~---~~~~~~p~~SpDG~~l~f~ 389 (826)
|++...... +.....++...||++++ .++.. +.+... ......+.|||||++|++.
T Consensus 184 ~~~~d~~~~--~~~~~~~~~~~v~~~~l-----------------~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~ 244 (695)
T 2bkl_A 184 YEWLPTDPS--IKVDERPGYTTIRYHTL-----------------GTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVY 244 (695)
T ss_dssp EEECCCCTT--SCGGGGGGGCEEEEEET-----------------TSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEE
T ss_pred EEEecCCCC--CccccCCCCCEEEEEEC-----------------CCCchhceEEEecCCCCEEEEEEEECCCCCEEEEE
Confidence 988543200 00011234557999998 44442 233322 2356789999999999999
Q ss_pred eccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeC-CeE
Q 003363 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG-SSQ 468 (826)
Q Consensus 390 s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~-~~~ 468 (826)
+.+.. ...+||++|..+++.+.++.... ....+.| +||+ +++.+... ...
T Consensus 245 ~~~~~-------~~~~l~~~~~~~~~~~~l~~~~~--------------------~~~~~~~-~~g~-l~~~s~~~~~~~ 295 (695)
T 2bkl_A 245 ILRGW-------SENDVYWKRPGEKDFRLLVKGVG--------------------AKYEVHA-WKDR-FYVLTDEGAPRQ 295 (695)
T ss_dssp EEETT-------TEEEEEEECTTCSSCEEEEECSS--------------------CCEEEEE-ETTE-EEEEECTTCTTC
T ss_pred EeCCC-------CceEEEEEcCCCCceEEeecCCC--------------------ceEEEEe-cCCc-EEEEECCCCCCC
Confidence 87641 34689999876654433322111 1112344 7888 88876644 467
Q ss_pred EEEEEECCCCcE---EEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 003363 469 VIISVNVSSGEL---LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 469 ~l~~vdl~tg~~---~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
.|+.+|+++++. +.++..........++..++.+++..... .-.+|++.++.
T Consensus 296 ~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~d-g~~~l~~~~~~ 350 (695)
T 2bkl_A 296 RVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKD-ATSEVRVATLK 350 (695)
T ss_dssp EEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEET-TEEEEEEEETT
T ss_pred EEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEEC-CEEEEEEEeCC
Confidence 999999988763 66665542222233444467777766543 34568887754
No 200
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.65 E-value=4.4e-16 Score=160.87 Aligned_cols=218 Identities=15% Similarity=0.121 Sum_probs=133.2
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCC
Q 003363 588 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 667 (826)
Q Consensus 588 ~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 667 (826)
...+.|+||++||++.. ...|...+..|++. |.|+++|+|| +|.+... .....++++.+.+..+++.
T Consensus 16 ~~~~~~~vv~~HG~~~~--~~~~~~~~~~l~~~-~~v~~~d~~G---~G~s~~~-----~~~~~~~~~~~~~~~~l~~-- 82 (267)
T 3fla_A 16 APDARARLVCLPHAGGS--ASFFFPLAKALAPA-VEVLAVQYPG---RQDRRHE-----PPVDSIGGLTNRLLEVLRP-- 82 (267)
T ss_dssp CTTCSEEEEEECCTTCC--GGGGHHHHHHHTTT-EEEEEECCTT---SGGGTTS-----CCCCSHHHHHHHHHHHTGG--
T ss_pred CCCCCceEEEeCCCCCC--chhHHHHHHHhccC-cEEEEecCCC---CCCCCCC-----CCCcCHHHHHHHHHHHHHh--
Confidence 34567999999997654 56787788888654 9999999999 5554321 1123466666665555554
Q ss_pred CCCCcEEEEEecchHHHHHHHHHhCCCc----eeEEEecCCccchhhhccCC-CCCCchhhhhccCcC--CccCCCCCC-
Q 003363 668 ANPSKVTVVGGSHGGFLTTHLIGQAPDK----FVAAAARNPLCNLALMVGTT-DIPDWCYVESYGSKG--KDSFTESPS- 739 (826)
Q Consensus 668 ~d~~rv~l~G~S~GG~~a~~~a~~~p~~----~~a~v~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~- 739 (826)
++.+++.|+|||+||.+++.++.++|++ ++++++.++........... ......+...+.... .......+.
T Consensus 83 ~~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (267)
T 3fla_A 83 FGDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPEL 162 (267)
T ss_dssp GTTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHH
T ss_pred cCCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHH
Confidence 3457899999999999999999999986 88888887653221110000 000000000000000 000000000
Q ss_pred --------hhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHH
Q 003363 740 --------VEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDF 811 (826)
Q Consensus 740 --------~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~ 811 (826)
...........+.. ..++++|+|+++|++|..+|++....+.+.+.. +++++++++ ||.+... ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~---~~~~~~~~g-gH~~~~~-~~~ 236 (267)
T 3fla_A 163 LAMVLPAIRSDYRAVETYRHEP-GRRVDCPVTVFTGDHDPRVSVGEARAWEEHTTG---PADLRVLPG-GHFFLVD-QAA 236 (267)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCT-TCCBSSCEEEEEETTCTTCCHHHHHGGGGGBSS---CEEEEEESS-STTHHHH-THH
T ss_pred HHHHHHHHHHHHHhhhcccccc-cCcCCCCEEEEecCCCCCCCHHHHHHHHHhcCC---CceEEEecC-Cceeecc-CHH
Confidence 00001111111111 157889999999999999999888776665543 489999998 9986533 445
Q ss_pred HHHHHHHHHHHHH
Q 003363 812 ESFLNIGLWFKKY 824 (826)
Q Consensus 812 ~~~~~i~~w~~~~ 824 (826)
++.+.+.+||++.
T Consensus 237 ~~~~~i~~fl~~~ 249 (267)
T 3fla_A 237 PMIATMTEKLAGP 249 (267)
T ss_dssp HHHHHHHHHTC--
T ss_pred HHHHHHHHHhccc
Confidence 7788888888764
No 201
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.64 E-value=4.3e-15 Score=145.32 Aligned_cols=171 Identities=12% Similarity=0.112 Sum_probs=122.4
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
+.|.||++||.+... ...|......+...+ +.++++|.. ....+++.+.+..+++. .+
T Consensus 16 ~~~~vv~~HG~~~~~-~~~~~~~~~~~~~~~---~~v~~~~~~---------------~~~~~~~~~~~~~~~~~--~~- 73 (191)
T 3bdv_A 16 QQLTMVLVPGLRDSD-DEHWQSHWERRFPHW---QRIRQREWY---------------QADLDRWVLAIRRELSV--CT- 73 (191)
T ss_dssp TTCEEEEECCTTCCC-TTSHHHHHHHHCTTS---EECCCSCCS---------------SCCHHHHHHHHHHHHHT--CS-
T ss_pred CCceEEEECCCCCCc-hhhHHHHHHHhcCCe---EEEeccCCC---------------CcCHHHHHHHHHHHHHh--cC-
Confidence 458899999977553 134444444333333 456776621 12356666666666655 33
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcC
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKS 750 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 750 (826)
+++.|+|||+||.+++.++.++|++++++|+.+|....... + +.
T Consensus 74 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~--------------~-----------~~----------- 117 (191)
T 3bdv_A 74 QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFE--------------I-----------DD----------- 117 (191)
T ss_dssp SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGT--------------C-----------TT-----------
T ss_pred CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCcccccc--------------C-----------cc-----------
Confidence 78999999999999999999999999999999987653210 0 00
Q ss_pred cccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCC--CCHHHHHHHHHHHHHHHc
Q 003363 751 PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERP--QSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 751 p~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~--~~~~~~~~~i~~w~~~~l 825 (826)
...+.++++|+|+++|++|..+|++.++++.+.+ ..+++++++++|.+... ....+....+.+|+++..
T Consensus 118 -~~~~~~~~~P~lii~g~~D~~~~~~~~~~~~~~~-----~~~~~~~~~~gH~~~~~~~~~~~~~~~~i~~fl~~~~ 188 (191)
T 3bdv_A 118 -RIQASPLSVPTLTFASHNDPLMSFTRAQYWAQAW-----DSELVDVGEAGHINAEAGFGPWEYGLKRLAEFSEILI 188 (191)
T ss_dssp -TSCSSCCSSCEEEEECSSBTTBCHHHHHHHHHHH-----TCEEEECCSCTTSSGGGTCSSCHHHHHHHHHHHHTTC
T ss_pred -ccccccCCCCEEEEecCCCCcCCHHHHHHHHHhc-----CCcEEEeCCCCcccccccchhHHHHHHHHHHHHHHhc
Confidence 0345678899999999999999999999998877 26899999999987542 133456688889987653
No 202
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.64 E-value=2.5e-15 Score=145.61 Aligned_cols=169 Identities=17% Similarity=0.102 Sum_probs=124.6
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCc---EEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY---SLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 668 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~---~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 668 (826)
.|+||++||.+.. ...|...+..|+++|| .|+++|++|.+.... ...+++.+.+..+++. +
T Consensus 3 ~~~vv~~HG~~~~--~~~~~~~~~~l~~~G~~~~~v~~~d~~g~g~s~~------------~~~~~~~~~~~~~~~~--~ 66 (181)
T 1isp_A 3 HNPVVMVHGIGGA--SFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNY------------NNGPVLSRFVQKVLDE--T 66 (181)
T ss_dssp CCCEEEECCTTCC--GGGGHHHHHHHHHTTCCGGGEEECCCSCTTCCHH------------HHHHHHHHHHHHHHHH--H
T ss_pred CCeEEEECCcCCC--HhHHHHHHHHHHHcCCCCccEEEEecCCCCCchh------------hhHHHHHHHHHHHHHH--c
Confidence 4779999997654 5578888899999998 699999999543211 2355666666666665 3
Q ss_pred CCCcEEEEEecchHHHHHHHHHhC--CCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHH
Q 003363 669 NPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRF 746 (826)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (826)
+.+++.++|||+||.+++.++.++ |++++++|+.+|....... . .+ +.
T Consensus 67 ~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~------------~--------~~---~~------- 116 (181)
T 1isp_A 67 GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTG------------K--------AL---PG------- 116 (181)
T ss_dssp CCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCS------------B--------CC---CC-------
T ss_pred CCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccc------------c--------cC---CC-------
Confidence 457899999999999999999988 8899999999987543210 0 00 00
Q ss_pred hhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 747 HSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 747 ~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
. ....++|+|+++|++|..+|++.+. + ...+++++++++|...... . ++.+.+.+||.+.
T Consensus 117 --~-----~~~~~~p~l~i~G~~D~~v~~~~~~-----~----~~~~~~~~~~~gH~~~~~~-~-~~~~~i~~fl~~~ 176 (181)
T 1isp_A 117 --T-----DPNQKILYTSIYSSADMIVMNYLSR-----L----DGARNVQIHGVGHIGLLYS-S-QVNSLIKEGLNGG 176 (181)
T ss_dssp --S-----CTTCCCEEEEEEETTCSSSCHHHHC-----C----BTSEEEEESSCCTGGGGGC-H-HHHHHHHHHHTTT
T ss_pred --C-----CCccCCcEEEEecCCCccccccccc-----C----CCCcceeeccCchHhhccC-H-HHHHHHHHHHhcc
Confidence 0 0123579999999999999987532 2 3468899999999876444 3 6889999999764
No 203
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.63 E-value=1e-15 Score=161.14 Aligned_cols=228 Identities=11% Similarity=0.037 Sum_probs=139.6
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcc
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~ 650 (826)
.+|..++...+. +.|+||++||.+.. ...|...+..|++. |.|+++|+||.+. +..... ......
T Consensus 16 ~~g~~l~~~~~g--------~~~~vv~lHG~~~~--~~~~~~~~~~L~~~-~~vi~~D~~G~G~---S~~~~~-~~~~~~ 80 (302)
T 1mj5_A 16 IKGRRMAYIDEG--------TGDPILFQHGNPTS--SYLWRNIMPHCAGL-GRLIACDLIGMGD---SDKLDP-SGPERY 80 (302)
T ss_dssp ETTEEEEEEEES--------CSSEEEEECCTTCC--GGGGTTTGGGGTTS-SEEEEECCTTSTT---SCCCSS-CSTTSS
T ss_pred ECCEEEEEEEcC--------CCCEEEEECCCCCc--hhhhHHHHHHhccC-CeEEEEcCCCCCC---CCCCCC-CCcccc
Confidence 356666554432 24889999997755 44566666777655 8999999999543 321100 011124
Q ss_pred hHHHHHHHHHHHHHcCCCCC-CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCC----------CC-
Q 003363 651 DVNDVLTAIDHVIDMGLANP-SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD----------IP- 718 (826)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~-~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~----------~~- 718 (826)
..+++.+.+..+++. ++. +++.|+|||+||.+++.++.++|++++++|+.+|............ .+
T Consensus 81 ~~~~~~~~~~~~l~~--l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (302)
T 1mj5_A 81 AYAEHRDYLDALWEA--LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAFRSQA 158 (302)
T ss_dssp CHHHHHHHHHHHHHH--TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCSCBCGGGSCGGGHHHHHHHHSTT
T ss_pred cHHHHHHHHHHHHHH--hCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCCchhhhhhhHHHHHHHHHHhccc
Confidence 566666666666665 344 7899999999999999999999999999999988653110000000 00
Q ss_pred Cc-------hhhhhccCcCCccCCCCCChhhHHH------------------Hhhc--------------CcccccCCCC
Q 003363 719 DW-------CYVESYGSKGKDSFTESPSVEDLTR------------------FHSK--------------SPISHISKVK 759 (826)
Q Consensus 719 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~--------------sp~~~~~~i~ 759 (826)
.. .+...+... ........+.... +... +....+.+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 235 (302)
T 1mj5_A 159 GEELVLQDNVFVEQVLPG---LILRPLSEAEMAAYREPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESP 235 (302)
T ss_dssp HHHHHTTTCHHHHTHHHH---TSSSCCCHHHHHHHHGGGCSSSGGGHHHHHTGGGSCBTTBSHHHHHHHHHHHHHHTTCC
T ss_pred hhhhhcChHHHHHHHHHh---cCcccCCHHHHHHHHHHhhcccccccchHHHHHhccccccchhhHHHHHHHHhhhhccC
Confidence 00 000000000 0000000010000 0010 1133467889
Q ss_pred CcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 760 TPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 760 ~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
+|+|+++|++|..+|++.++.+.+.+. . +++++ ++||.+... ...++.+.|.+|+.+..
T Consensus 236 ~P~l~i~g~~D~~~~~~~~~~~~~~~~----~-~~~~~-~~gH~~~~e-~p~~~~~~i~~fl~~~~ 294 (302)
T 1mj5_A 236 IPKLFINAEPGALTTGRMRDFCRTWPN----Q-TEITV-AGAHFIQED-SPDEIGAAIAAFVRRLR 294 (302)
T ss_dssp SCEEEEEEEECSSSSHHHHHHHTTCSS----E-EEEEE-EESSCGGGT-CHHHHHHHHHHHHHHHS
T ss_pred CCeEEEEeCCCCCCChHHHHHHHHhcC----C-ceEEe-cCcCccccc-CHHHHHHHHHHHHHhhc
Confidence 999999999999999987766655443 3 78888 999987644 45588899999998753
No 204
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.63 E-value=8.9e-15 Score=155.16 Aligned_cols=117 Identities=19% Similarity=0.292 Sum_probs=78.6
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..++.....+ ...|.||++||+++...... ....+...||.|+++|+||. |.+.. +.......
T Consensus 20 ~g~~l~y~~~G~------~~g~pvvllHG~~~~~~~~~---~~~~~~~~~~~vi~~D~~G~---G~S~~---~~~~~~~~ 84 (313)
T 1azw_A 20 DRHTLYFEQCGN------PHGKPVVMLHGGPGGGCNDK---MRRFHDPAKYRIVLFDQRGS---GRSTP---HADLVDNT 84 (313)
T ss_dssp SSCEEEEEEEEC------TTSEEEEEECSTTTTCCCGG---GGGGSCTTTEEEEEECCTTS---TTSBS---TTCCTTCC
T ss_pred CCCEEEEEecCC------CCCCeEEEECCCCCccccHH---HHHhcCcCcceEEEECCCCC---cCCCC---Cccccccc
Confidence 456665444432 12366899999765432211 12334457999999999994 44421 11112234
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCc
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~ 705 (826)
.+++.+.+..+++. ++.+++.|+||||||.+++.++.++|++++++|+.++.
T Consensus 85 ~~~~~~dl~~l~~~--l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 85 TWDLVADIERLRTH--LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp HHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 56666666666665 34568999999999999999999999999999998764
No 205
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.63 E-value=3.3e-15 Score=153.95 Aligned_cols=224 Identities=11% Similarity=0.106 Sum_probs=132.7
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcch
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQD 651 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~ 651 (826)
+|..++.....+ ...|+||++||.+.. ...|...+..|++ +|.|+++|+||. |.+... .....
T Consensus 7 ~g~~l~~~~~g~------~~~~~vv~lHG~~~~--~~~~~~~~~~L~~-~~~v~~~D~~G~---G~S~~~-----~~~~~ 69 (264)
T 3ibt_A 7 NGTLMTYSESGD------PHAPTLFLLSGWCQD--HRLFKNLAPLLAR-DFHVICPDWRGH---DAKQTD-----SGDFD 69 (264)
T ss_dssp TTEECCEEEESC------SSSCEEEEECCTTCC--GGGGTTHHHHHTT-TSEEEEECCTTC---STTCCC-----CSCCC
T ss_pred CCeEEEEEEeCC------CCCCeEEEEcCCCCc--HhHHHHHHHHHHh-cCcEEEEccccC---CCCCCC-----ccccC
Confidence 455555444322 235789999997765 4567778888854 599999999994 443211 22234
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhC-CCceeEEEecCCccchh-----hhccCCCCCCchhh-h
Q 003363 652 VNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNLA-----LMVGTTDIPDWCYV-E 724 (826)
Q Consensus 652 ~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~~-----~~~~~~~~~~~~~~-~ 724 (826)
++++.+.+..+++. ++.+++.|+|||+||.+++.++.++ |++++++|+.+|..... .+........+... .
T Consensus 70 ~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (264)
T 3ibt_A 70 SQTLAQDLLAFIDA--KGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQLAEGQHPTEYVAGRQ 147 (264)
T ss_dssp HHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCSSCCHHHHHHHHHTTCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHh--cCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCCCcChhhcchhhcccChhhHHHHHH
Confidence 66666666666655 3456899999999999999999999 99999999998755110 00000000001000 0
Q ss_pred hccCcCCccCCCCCChhhHHHH-------------------h-----hcCcccccCCCCCcEEEEEeCCCCCC--CcHHH
Q 003363 725 SYGSKGKDSFTESPSVEDLTRF-------------------H-----SKSPISHISKVKTPTIFLLGAQDLRV--PVSNG 778 (826)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~-------------------~-----~~sp~~~~~~i~~PvLii~G~~D~~v--p~~~~ 778 (826)
... ...+......+..+.+ . ..++...+.++++|+|++||..|... ++...
T Consensus 148 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~g~~~~~~~~~~~~~ 224 (264)
T 3ibt_A 148 SFF---DEWAETTDNADVLNHLRNEMPWFHGEMWQRACREIEANYRTWGSPLDRMDSLPQKPEICHIYSQPLSQDYRQLQ 224 (264)
T ss_dssp HHH---HHHHTTCCCHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHHSSHHHHHHTCSSCCEEEEEECCSCCHHHHHHH
T ss_pred HHH---HHhcccCCcHHHHHHHHHhhhhccchhHHHHHHHhccchhhccchhhcccccCCCeEEEEecCCccchhhHHHH
Confidence 000 0000000000000000 0 11223556789999999987554433 34444
Q ss_pred HHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 003363 779 LQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 779 ~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~ 822 (826)
..+.+.+ ...++++++++||..... ...++.+.|.+||+
T Consensus 225 ~~~~~~~----~~~~~~~i~~~gH~~~~e-~p~~~~~~i~~fl~ 263 (264)
T 3ibt_A 225 LEFAAGH----SWFHPRHIPGRTHFPSLE-NPVAVAQAIREFLQ 263 (264)
T ss_dssp HHHHHHC----TTEEEEECCCSSSCHHHH-CHHHHHHHHHHHTC
T ss_pred HHHHHhC----CCceEEEcCCCCCcchhh-CHHHHHHHHHHHHh
Confidence 4444443 347999999999976533 34467788888875
No 206
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.62 E-value=1.5e-15 Score=158.96 Aligned_cols=235 Identities=14% Similarity=0.162 Sum_probs=133.3
Q ss_pred cCCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchH-----HHHHHHHCCcEEEEECCCCCCCCchhhhhcCC
Q 003363 570 KGAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSK-----SLAFLSSVGYSLLIVNYRGSLGFGEEALQSLP 644 (826)
Q Consensus 570 ~~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~-----~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~ 644 (826)
..+|..++...+.+. ....|+||++||.+.... ..|.. .+..|++ +|.|+++|+||.+ .+... .+
T Consensus 17 ~~~~~~l~y~~~G~~----~~~~p~vvllHG~~~~~~-~~~~~~~~~~~~~~L~~-~~~vi~~D~~G~G---~s~~~-~~ 86 (286)
T 2qmq_A 17 ETPYGSVTFTVYGTP----KPKRPAIFTYHDVGLNYK-SCFQPLFRFGDMQEIIQ-NFVRVHVDAPGME---EGAPV-FP 86 (286)
T ss_dssp EETTEEEEEEEESCC----CTTCCEEEEECCTTCCHH-HHHHHHHTSHHHHHHHT-TSCEEEEECTTTS---TTCCC-CC
T ss_pred ccCCeEEEEEeccCC----CCCCCeEEEeCCCCCCch-hhhhhhhhhchhHHHhc-CCCEEEecCCCCC---CCCCC-CC
Confidence 445677766555432 224689999999775521 11333 5666765 6999999999953 22110 01
Q ss_pred CCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc--------c-CC
Q 003363 645 GKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV--------G-TT 715 (826)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~--------~-~~ 715 (826)
.......++++.+.+..+++. ++.+++.|+|||+||.+++.++.++|++++++|+.+|........ . ..
T Consensus 87 ~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 164 (286)
T 2qmq_A 87 LGYQYPSLDQLADMIPCILQY--LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTS 164 (286)
T ss_dssp TTCCCCCHHHHHHTHHHHHHH--HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCCCCHHHHHHHHHHHTTS
T ss_pred CCCCccCHHHHHHHHHHHHHH--hCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCCcccchhhhhhhhhccccc
Confidence 111112455555555555554 234689999999999999999999999999999999854221100 0 00
Q ss_pred CCCCchhhhhccCcC-----------CccCCCCCChhhHHHHh----hcCc----ccccCCCCCcEEEEEeCCCCCCCcH
Q 003363 716 DIPDWCYVESYGSKG-----------KDSFTESPSVEDLTRFH----SKSP----ISHISKVKTPTIFLLGAQDLRVPVS 776 (826)
Q Consensus 716 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~----~~sp----~~~~~~i~~PvLii~G~~D~~vp~~ 776 (826)
..........+.... ...+...........+. .... ...+.++++|+|+++|++|..+| .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-~ 243 (286)
T 2qmq_A 165 SIPDMILGHLFSQEELSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFERGGETTLKCPVMLVVGDQAPHED-A 243 (286)
T ss_dssp CHHHHHHHHHSCHHHHHTTCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCCCCCSEETTEECCCSCEEEEEETTSTTHH-H
T ss_pred cchHHHHHHHhcCCCCCcchHHHHHHHHHHHhcCCcchHHHHHHHHhhhhhhhhhhchhccCCCCEEEEecCCCcccc-H
Confidence 000000000000000 00000000000001111 1011 13456889999999999999987 2
Q ss_pred HHHHHHHHHHhCCC-CEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHH
Q 003363 777 NGLQYARALREKGV-ETKVIVFPNDVHGIERPQSDFESFLNIGLWFK 822 (826)
Q Consensus 777 ~~~~~~~~l~~~g~-~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~ 822 (826)
. .+.+.+... .+++++++++||.+.... ..++.+.+.+||+
T Consensus 244 ~----~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~ 285 (286)
T 2qmq_A 244 V----VECNSKLDPTQTSFLKMADSGGQPQLTQ-PGKLTEAFKYFLQ 285 (286)
T ss_dssp H----HHHHHHSCGGGEEEEEETTCTTCHHHHC-HHHHHHHHHHHHC
T ss_pred H----HHHHHHhcCCCceEEEeCCCCCcccccC-hHHHHHHHHHHhc
Confidence 2 233333333 589999999999875433 4577888888875
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.62 E-value=3.7e-14 Score=167.78 Aligned_cols=267 Identities=9% Similarity=0.015 Sum_probs=171.7
Q ss_pred EEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCC--
Q 003363 99 WTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN-- 176 (826)
Q Consensus 99 ~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~-- 176 (826)
.-...+||||++++|+.+... .....|+++++.+ ++..+.+... .....++|| ||+.|+|++..+.
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G----~~~~~i~v~dl~t--g~~~~~~~~~-----~k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAG----SDWREIHLMDVES--KQPLETPLKD-----VKFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSS----CCEEEEEEEETTT--CSEEEEEEEE-----EESCCCEEE-TTTEEEEEESSCCC-
T ss_pred EEEEEECCCCCEEEEEEecCC----CceEEEEEEECCC--CCCCccccCC-----ceeccEEEe-CCCEEEEEEecCccc
Confidence 334467999999999876532 3457888888743 3333332221 114678999 9999999987642
Q ss_pred -------CCCeEEEEecC-Cc--eeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCC
Q 003363 177 -------ESPIQFELWSQ-SQ--LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSS 246 (826)
Q Consensus 177 -------~~~~~~~i~~~-~~--~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~ 246 (826)
...+++....+ +. .+.+....... +.++.++.|||||++|++.+....
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~------~~~~~~~~~SpDg~~l~~~~~~~~---------------- 256 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ------HHRYVGATVTEDDRFLLISAANST---------------- 256 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESCSGGG------CCSEEEEEECTTSCEEEEEEESSS----------------
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEecCCCC------CeEEEEEEEcCCCCEEEEEEccCC----------------
Confidence 23345544422 22 23333322101 112358899999999999865431
Q ss_pred CccCCCCCCcceeecCCCccCCCccCceEEEEEccCC--ceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCccee
Q 003363 247 DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG--EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRK 324 (826)
Q Consensus 247 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g--~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~ 324 (826)
....||++|++++ +.+.+. ........ .|++||+. |+|.++...
T Consensus 257 ------------------------~~~~i~~~d~~~~~~~~~~l~--~~~~~~~~-~~~~~g~~----l~~~t~~~~--- 302 (693)
T 3iuj_A 257 ------------------------SGNRLYVKDLSQENAPLLTVQ--GDLDADVS-LVDNKGST----LYLLTNRDA--- 302 (693)
T ss_dssp ------------------------SCCEEEEEETTSTTCCCEEEE--CSSSSCEE-EEEEETTE----EEEEECTTC---
T ss_pred ------------------------CCcEEEEEECCCCCCceEEEe--CCCCceEE-EEeccCCE----EEEEECCCC---
Confidence 1258999999876 567773 33222223 38999999 999986432
Q ss_pred eeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc---eecCCCCccccCceecCCCCEEEEEeccCCCCCCCCc
Q 003363 325 LGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV---VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHS 401 (826)
Q Consensus 325 ~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~ 401 (826)
....|+.+|+ +++.. +.|+.+..... .||++|++|++...++
T Consensus 303 --------~~~~l~~~d~-----------------~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~-------- 347 (693)
T 3iuj_A 303 --------PNRRLVTVDA-----------------ANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVD-------- 347 (693)
T ss_dssp --------TTCEEEEEET-----------------TSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEET--------
T ss_pred --------CCCEEEEEeC-----------------CCCCccccEEEecCCCCEE--EEEEECCEEEEEEEEC--------
Confidence 2347999998 44443 66766655443 9999999999988774
Q ss_pred ccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEe-CCeEEEEEEECCCCcE
Q 003363 402 ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSSQVIISVNVSSGEL 480 (826)
Q Consensus 402 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~-~~~~~l~~vdl~tg~~ 480 (826)
+..+|+++|++++..+.+.... .. .+..+.+++|++.|++.... .....+|.+|+.+++.
T Consensus 348 g~~~l~~~d~~g~~~~~l~~p~-----------~~--------~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 348 ATARVEQFDYEGKRVREVALPG-----------LG--------SVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp TEEEEEEECTTSCEEEEECCSS-----------SS--------EEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred CeeEEEEEECCCCeeEEeecCC-----------Cc--------eEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 3468999998864432221110 00 12245678899988887654 2456899999999998
Q ss_pred EEecCCC
Q 003363 481 LRITPAE 487 (826)
Q Consensus 481 ~~lt~~~ 487 (826)
+.+....
T Consensus 409 ~~l~~~~ 415 (693)
T 3iuj_A 409 SLYRASA 415 (693)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 8887543
No 208
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.62 E-value=3.3e-15 Score=152.34 Aligned_cols=206 Identities=17% Similarity=0.116 Sum_probs=127.1
Q ss_pred CCCcEEEEEcCCCCCCCCccch----HHHHHHHHCCcEEEEECCCCCCC------------------CchhhhhcCCCCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYS----KSLAFLSSVGYSLLIVNYRGSLG------------------FGEEALQSLPGKV 647 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~----~~~~~la~~G~~Vl~~d~rG~~g------------------~G~~~~~~~~~~~ 647 (826)
.+.|.||++||.+.+ ...|. .....|.++||.|+.+|+++... +|... .-....
T Consensus 3 ~~~~~vl~lHG~g~~--~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~--~w~~~~ 78 (243)
T 1ycd_A 3 VQIPKLLFLHGFLQN--GKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNR--AWFYHS 78 (243)
T ss_dssp CCCCEEEEECCTTCC--HHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCE--ESSCCC
T ss_pred CcCceEEEeCCCCcc--HHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCc--ccccCC
Confidence 356899999996654 33333 35566777899999999993211 11100 000001
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCC------CceeEEEecCCccchhhhccCCCCCCch
Q 003363 648 GSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP------DKFVAAAARNPLCNLALMVGTTDIPDWC 721 (826)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p------~~~~a~v~~~p~~~~~~~~~~~~~~~~~ 721 (826)
......|+.++++++.+....+..+++|+|||+||.+++.++.+++ ..++++++.++....... ....
T Consensus 79 ~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~---~~~~--- 152 (243)
T 1ycd_A 79 EISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPD---PEHP--- 152 (243)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEEC---TTST---
T ss_pred CCcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcc---cccc---
Confidence 1122455666666665542223468999999999999999988653 246777777665432110 0000
Q ss_pred hhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCC---CCEEEEEeC
Q 003363 722 YVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKG---VETKVIVFP 798 (826)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g---~~~~~~~~p 798 (826)
+. ..+ . + .+ ......+.++++|+|++||++|..||++++.++++.++..+ .....++++
T Consensus 153 -----~~---~~~----~-~---~~--~~~~~~~~~~~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~~g~~~~~~~~~~~ 214 (243)
T 1ycd_A 153 -----GE---LRI----T-E---KF--RDSFAVKPDMKTKMIFIYGASDQAVPSVRSKYLYDIYLKAQNGNKEKVLAYEH 214 (243)
T ss_dssp -----TC---EEE----C-G---GG--TTTTCCCTTCCCEEEEEEETTCSSSCHHHHHHHHHHHHHHTTTCTTTEEEEEE
T ss_pred -----cc---ccc----c-h---hH--HHhccCcccCCCCEEEEEeCCCCccCHHHHHHHHHHhhhhccccccccEEEec
Confidence 00 000 0 0 00 01122356688999999999999999999999999998641 112345667
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 799 NDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 799 ~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
++||.+... ..+...+.+||+++++
T Consensus 215 ~~gH~~~~~---~~~~~~i~~fl~~~~~ 239 (243)
T 1ycd_A 215 PGGHMVPNK---KDIIRPIVEQITSSLQ 239 (243)
T ss_dssp SSSSSCCCC---HHHHHHHHHHHHHHHC
T ss_pred CCCCcCCch---HHHHHHHHHHHHHhhh
Confidence 789987543 2588999999998764
No 209
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.62 E-value=1.5e-15 Score=166.32 Aligned_cols=213 Identities=11% Similarity=0.030 Sum_probs=141.4
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcE----EEEECCCCCCCCchhhhhcCCCCC
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYS----LLIVNYRGSLGFGEEALQSLPGKV 647 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~----Vl~~d~rG~~g~G~~~~~~~~~~~ 647 (826)
.|.....++|.|++++ .+++|+|+++||+.+... ..+...++.|+++|+. |+.+|+++..+ +.. ...
T Consensus 178 ~g~~~~~~vy~P~~~~-~~~~PvlvllHG~~~~~~-~~~~~~~~~l~~~g~~~p~iVV~~d~~~~~~--r~~--~~~--- 248 (403)
T 3c8d_A 178 LKNSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQS-MPVWPVLTSLTHRQQLPPAVYVLIDAIDTTH--RAH--ELP--- 248 (403)
T ss_dssp TTEEEEEEEEEC------CCCCEEEESSHHHHHHT-SCCHHHHHHHHHTTSSCSCEEEEECCCSHHH--HHH--HSS---
T ss_pred cCCcEEEEEEeCCCCC-CCCCCEEEEeCCHHHhhc-CcHHHHHHHHHHcCCCCCeEEEEECCCCCcc--ccc--cCC---
Confidence 4567888999998753 578999999999643211 1234567788888875 99999986321 111 111
Q ss_pred CcchHHHH--HHHHHHHHHcCC--CCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCchhh
Q 003363 648 GSQDVNDV--LTAIDHVIDMGL--ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDWCYV 723 (826)
Q Consensus 648 ~~~~~~D~--~~~i~~l~~~~~--~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~ 723 (826)
......+. .+++.++.++.. .|+++++|+|+||||++++.++.++|++|+++++.+|.+.+....
T Consensus 249 ~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~~~----------- 317 (403)
T 3c8d_A 249 CNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRG----------- 317 (403)
T ss_dssp SCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTCTT-----------
T ss_pred ChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCCCC-----------
Confidence 11123332 345667666532 578999999999999999999999999999999999976432110
Q ss_pred hhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCC
Q 003363 724 ESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG 803 (826)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~ 803 (826)
.. +.......+.. . ......+|++|+||+.|..+ ..++++++++|+++|+++++.++|| +|.
T Consensus 318 ----~~--------~~~~~~~~~~~-~---~~~~~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~G~~v~~~~~~G-gH~ 379 (403)
T 3c8d_A 318 ----GQ--------QEGVLLEKLKA-G---EVSAEGLRIVLEAGIREPMI-MRANQALYAQLHPIKESIFWRQVDG-GHD 379 (403)
T ss_dssp ----SS--------SCCHHHHHHHT-T---SSCCCSCEEEEEEESSCHHH-HHHHHHHHHHTGGGTTSEEEEEESC-CSC
T ss_pred ----CC--------cHHHHHHHHHh-c---cccCCCceEEEEeeCCCchh-HHHHHHHHHHHHhCCCCEEEEEeCC-CCC
Confidence 00 00011111111 1 12345688999999998653 6889999999999999999999999 597
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc
Q 003363 804 IERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 804 ~~~~~~~~~~~~~i~~w~~~~l 825 (826)
+. .....+..++.||.+.+
T Consensus 380 ~~---~w~~~l~~~l~~l~~~~ 398 (403)
T 3c8d_A 380 AL---CWRGGLMQGLIDLWQPL 398 (403)
T ss_dssp HH---HHHHHHHHHHHHHHGGG
T ss_pred HH---HHHHHHHHHHHHHhccc
Confidence 42 12345667788876653
No 210
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.61 E-value=2.9e-13 Score=144.52 Aligned_cols=243 Identities=12% Similarity=0.136 Sum_probs=150.9
Q ss_pred EEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCce-eEEEecCCCccccccCCCcccc-eeecCCCCeEEEEeecCCCCCC
Q 003363 158 AVVPSPSGSKLLVVRNPENESPIQFELW-SQSQL-EKEFHVPQTVHGSVYADGWFEG-ISWNSDETLIAYVAEEPSPSKP 234 (826)
Q Consensus 158 ~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~-~~~~~~~~~~~g~v~~~~~~~~-~~wSPDg~~ia~~~~~~~~~~~ 234 (826)
.++|||||++|++..... ..++.++ ..++. .+........ .. +.|||||++|+ ++....
T Consensus 44 ~~~~s~dg~~l~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~----------~~~~~~s~dg~~l~-~~~~~~---- 105 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFC---QTLVQIETQLEPPKVVAIQEGQSS----------MADVDITPDDQFAV-TVTGLN---- 105 (331)
T ss_dssp EEEECSSSCEEEEEESTT---CEEEEEECSSSSCEEEEEEECSSC----------CCCEEECTTSSEEE-ECCCSS----
T ss_pred eEEEcCCCCEEEEEeCCC---CeEEEEECCCCceeEEecccCCCC----------ccceEECCCCCEEE-EecCCC----
Confidence 889999999887776533 2566666 44554 3333333333 34 99999999998 432210
Q ss_pred CccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEE
Q 003363 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 314 (826)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lv 314 (826)
....|++||+++++.... .+.......++|+|||+. |+
T Consensus 106 ------------------------------------~~~~i~v~d~~~~~~~~~--~~~~~~~~~~~~spdg~~----l~ 143 (331)
T 3u4y_A 106 ------------------------------------HPFNMQSYSFLKNKFIST--IPIPYDAVGIAISPNGNG----LI 143 (331)
T ss_dssp ------------------------------------SSCEEEEEETTTTEEEEE--EECCTTEEEEEECTTSSC----EE
T ss_pred ------------------------------------CcccEEEEECCCCCeEEE--EECCCCccceEECCCCCE----EE
Confidence 124899999999887665 334445678999999998 87
Q ss_pred EEeecCcceeeeeeeeccCCCc-eEEEEcccccchhhhhhhhcCCCCCCcc----eecCCCCccccCceecCCCCEEEEE
Q 003363 315 FVGWSSETRKLGIKYCYNRPCA-LYAVRVSLYKSEASELELKESSSEDLPV----VNLTESISSAFFPRFSPDGKFLVFL 389 (826)
Q Consensus 315 f~~~~~~~~~~g~~~~~~~~~~-l~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~Lt~~~~~~~~p~~SpDG~~l~f~ 389 (826)
+.... ... |++++++ ..+.. ..............|||||++|++.
T Consensus 144 ~~~~~--------------~~~~i~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 144 LIDRS--------------SANTVRRFKID----------------ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp EEEET--------------TTTEEEEEEEC----------------TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred EEecC--------------CCceEEEEEEC----------------CCCcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 76522 124 6666662 12221 1222223346778999999988766
Q ss_pred eccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEE
Q 003363 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 469 (826)
Q Consensus 390 s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~ 469 (826)
.... ..|++||+.+++... .+..+... .....+.|+|||++|+++. .+...
T Consensus 194 ~~~~----------~~v~v~d~~~~~~~~-------~~~~~~~~----------~~~~~~~~spdg~~l~v~~--~~~~~ 244 (331)
T 3u4y_A 194 NLIG----------NSIGILETQNPENIT-------LLNAVGTN----------NLPGTIVVSRDGSTVYVLT--ESTVD 244 (331)
T ss_dssp ETTT----------TEEEEEECSSTTSCE-------EEEEEECS----------SCCCCEEECTTSSEEEEEC--SSEEE
T ss_pred eCCC----------CeEEEEECCCCcccc-------eeeeccCC----------CCCceEEECCCCCEEEEEE--cCCCE
Confidence 5432 569999988755411 01111110 1345778999999887653 34566
Q ss_pred EEEEECCCCcEEEecC---C----CC---CeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 470 IISVNVSSGELLRITP---A----ES---NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 470 l~~vdl~tg~~~~lt~---~----~~---~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
|+.+|+.+++++.+.. . .. ......|++|++.+++..... ..+.+.++..
T Consensus 245 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~---~~v~v~d~~~ 304 (331)
T 3u4y_A 245 VFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS---RELKVFTISG 304 (331)
T ss_dssp EEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT---TEEEEEETTS
T ss_pred EEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC---CcEEEEEecC
Confidence 8889999998854421 1 11 112247899999887766543 2477777643
No 211
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.61 E-value=8.2e-16 Score=158.30 Aligned_cols=207 Identities=17% Similarity=0.159 Sum_probs=126.3
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcE
Q 003363 594 LIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKV 673 (826)
Q Consensus 594 ~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv 673 (826)
.||++||.+.. ...|...+..|+ .+|.|+++|+||. |.+... ....++++. +.+.+. ++ +++
T Consensus 15 ~vvllHG~~~~--~~~w~~~~~~L~-~~~~vi~~Dl~G~---G~S~~~------~~~~~~~~~---~~l~~~--l~-~~~ 76 (258)
T 1m33_A 15 HLVLLHGWGLN--AEVWRCIDEELS-SHFTLHLVDLPGF---GRSRGF------GALSLADMA---EAVLQQ--AP-DKA 76 (258)
T ss_dssp EEEEECCTTCC--GGGGGGTHHHHH-TTSEEEEECCTTS---TTCCSC------CCCCHHHHH---HHHHTT--SC-SSE
T ss_pred eEEEECCCCCC--hHHHHHHHHHhh-cCcEEEEeeCCCC---CCCCCC------CCcCHHHHH---HHHHHH--hC-CCe
Confidence 79999997654 456777777776 5899999999994 444211 123344433 444443 44 789
Q ss_pred EEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCCCCCc---hhhhhcc----C---cC--CccCC------
Q 003363 674 TVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTDIPDW---CYVESYG----S---KG--KDSFT------ 735 (826)
Q Consensus 674 ~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~~~~~---~~~~~~~----~---~~--~~~~~------ 735 (826)
.|+||||||.+++.+|.++|++++++|+.++................ .+..... . .. ...+.
T Consensus 77 ~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (258)
T 1m33_A 77 IWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDQQRTVERFLALQTMGTETARQ 156 (258)
T ss_dssp EEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBCBTTBCSBCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTSTTHHH
T ss_pred EEEEECHHHHHHHHHHHHhhHhhceEEEECCCCCccccccccCCCHHHHHHHHHHHhccHHHHHHHHHHHHhcCCccchh
Confidence 99999999999999999999999999998764211100000000000 0000000 0 00 00000
Q ss_pred ------------CCCChhhH----HHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCC
Q 003363 736 ------------ESPSVEDL----TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPN 799 (826)
Q Consensus 736 ------------~~~~~~~~----~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~ 799 (826)
..+..... ..+...+....+.++++|+|+++|++|..+|+..++.+.+.+. ..+++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~----~~~~~~i~~ 232 (258)
T 1m33_A 157 DARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP----HSESYIFAK 232 (258)
T ss_dssp HHHHHHHHHHTSCCCCHHHHHHHHHHHHHCCCTTGGGGCCSCEEEEEETTCSSSCGGGCC-CTTTCT----TCEEEEETT
T ss_pred hHHHHHHHHHhccCCcHHHHHHHHHHHHhCCHHHHHhhCCCCEEEEeecCCCCCCHHHHHHHHHhCc----cceEEEeCC
Confidence 00000000 0111222334567889999999999999999887665554443 468999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 800 DVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 800 ~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
+||.....+ ..++...|.+|+.+
T Consensus 233 ~gH~~~~e~-p~~~~~~i~~fl~~ 255 (258)
T 1m33_A 233 AAHAPFISH-PAEFCHLLVALKQR 255 (258)
T ss_dssp CCSCHHHHS-HHHHHHHHHHHHTT
T ss_pred CCCCccccC-HHHHHHHHHHHHHh
Confidence 999865443 45788889999865
No 212
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.61 E-value=4.9e-15 Score=158.77 Aligned_cols=207 Identities=14% Similarity=0.136 Sum_probs=125.3
Q ss_pred CCcEEEEEcCCCCCCC-CccchHHHHHHHHCCcEEEEECC----CCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHc
Q 003363 591 CDPLIVVLHGGPHSVS-LSSYSKSLAFLSSVGYSLLIVNY----RGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDM 665 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~-~~~~~~~~~~la~~G~~Vl~~d~----rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 665 (826)
..|+||++||.+.... ...|...+..| +.||.|+++|+ || +|.+.. ....+|+.++++++.+.
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L-~~g~~Vi~~Dl~~D~~G---~G~S~~--------~~~~~d~~~~~~~l~~~ 104 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIG---SGPQDH--------AHDAEDVDDLIGILLRD 104 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHH-TTTCEEEEECCGGGBTT---SCSCCH--------HHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHH-HCCcEEEEEeccCCCCC---CCCccc--------cCcHHHHHHHHHHHHHH
Confidence 4578999999654322 22345667777 78999999965 66 544321 12467888888888875
Q ss_pred CCCCCCcEEEEEecchHHHHHHHHH--hCCCceeEEEecCCccchhhhccCCCCCC--ch----hhhhc---c--CcC--
Q 003363 666 GLANPSKVTVVGGSHGGFLTTHLIG--QAPDKFVAAAARNPLCNLALMVGTTDIPD--WC----YVESY---G--SKG-- 730 (826)
Q Consensus 666 ~~~d~~rv~l~G~S~GG~~a~~~a~--~~p~~~~a~v~~~p~~~~~~~~~~~~~~~--~~----~~~~~---~--~~~-- 730 (826)
++.+++.|+||||||.+++.++. .+|++++++|+.+|..+... ..... +. ..... + ...
T Consensus 105 --l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (335)
T 2q0x_A 105 --HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCDPEN----PLFTPEGCAARKEHVEKLMAEGRGEDSLA 178 (335)
T ss_dssp --SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCCTTS----TTTSHHHHHHHHHHHHHHHHHTCTTCGGG
T ss_pred --cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCcccchh----cccCHHHHHHHHHHHHHHhhccCcccccc
Confidence 45689999999999999999998 57999999999887643210 00000 00 00000 0 000
Q ss_pred CccCCCCCC-hhh-------------HHHHh---hcCcccccCCCCCcEEEEEeCCCCCCCcHH-HHHHHHHHHhCCCCE
Q 003363 731 KDSFTESPS-VED-------------LTRFH---SKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREKGVET 792 (826)
Q Consensus 731 ~~~~~~~~~-~~~-------------~~~~~---~~sp~~~~~~i~~PvLii~G~~D~~vp~~~-~~~~~~~l~~~g~~~ 792 (826)
...+...+. ... ..... ..+....+.++++|+|+++|++|..+|+.. ...+.+.+.+.-...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLvi~G~~D~~vp~~~~~~~~~~~l~~~~~~~ 258 (335)
T 2q0x_A 179 MLKHYDIPITPARLAGGGFPTLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRDHTGCN 258 (335)
T ss_dssp GTTTCSSCCCHHHHHTCSCSSHHHHTHHHHHTTCHHHHHHTGGGCCSCEEEEEECCTTCCCCHHHHHHHHHHHHHHSSSS
T ss_pred chhhccCccCHHHHhhccCCCchhhhhhhhhhhhhhHHHHHHhcCCCCeEEEEecCCCCCChhhhHHHHHHHHHHhcCcc
Confidence 000000000 000 00000 011223567899999999999999999864 223334443322223
Q ss_pred E--------E-----EEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 793 K--------V-----IVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 793 ~--------~-----~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
+ + +++|++|| +....+.+||++.
T Consensus 259 ~~~~~~~~~~~~~~~~~i~~agH---------e~~~~i~~FL~~~ 294 (335)
T 2q0x_A 259 RVTVSYFNDTCDELRRVLKAAES---------EHVAAILQFLADE 294 (335)
T ss_dssp CEEEEECCCEECTTSCEEECCHH---------HHHHHHHHHHHHH
T ss_pred ccccccccchhhhhhcccCCCCC---------HHHHHHHHHHHhh
Confidence 3 5 78999999 3478899999764
No 213
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.61 E-value=3.1e-15 Score=154.64 Aligned_cols=210 Identities=15% Similarity=0.177 Sum_probs=123.9
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (826)
.|.||++||.+.. ...|...+..|++.||.|+++|+||.|. +... ....++++.+.+..+++.-.++..
T Consensus 16 ~~~vvllHG~~~~--~~~w~~~~~~L~~~~~~vi~~Dl~GhG~---S~~~------~~~~~~~~a~~l~~~l~~l~~~~~ 84 (264)
T 1r3d_A 16 TPLVVLVHGLLGS--GADWQPVLSHLARTQCAALTLDLPGHGT---NPER------HCDNFAEAVEMIEQTVQAHVTSEV 84 (264)
T ss_dssp BCEEEEECCTTCC--GGGGHHHHHHHTTSSCEEEEECCTTCSS---CC-------------CHHHHHHHHHHHTTCCTTS
T ss_pred CCcEEEEcCCCCC--HHHHHHHHHHhcccCceEEEecCCCCCC---CCCC------CccCHHHHHHHHHHHHHHhCcCCC
Confidence 4889999997655 5578888888876899999999999543 3211 012345555555555555323322
Q ss_pred cEEEEEecchHHHHHH---HHHhCCCceeEEEecCCccchhhhcc----CCCCCCch----------hhhhccCcCCccC
Q 003363 672 KVTVVGGSHGGFLTTH---LIGQAPDKFVAAAARNPLCNLALMVG----TTDIPDWC----------YVESYGSKGKDSF 734 (826)
Q Consensus 672 rv~l~G~S~GG~~a~~---~a~~~p~~~~a~v~~~p~~~~~~~~~----~~~~~~~~----------~~~~~~~~~~~~~ 734 (826)
++.|+||||||.+++. ++.++|++++++|+.++......... ......|. ....+.. ...+
T Consensus 85 p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 162 (264)
T 1r3d_A 85 PVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQENEEKAARWQHDQQWAQRFSQQPIEHVLSDWYQ--QAVF 162 (264)
T ss_dssp EEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCCCCCCSHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHTT--SGGG
T ss_pred ceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCCCCCCChhhhhhhhcccHHHHHHhccccHHHHHHHHhh--hhhh
Confidence 4999999999999999 88889999999999876432110000 00000000 0000000 0000
Q ss_pred CCCC--------------ChhhHHHHh-h------cCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEE
Q 003363 735 TESP--------------SVEDLTRFH-S------KSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETK 793 (826)
Q Consensus 735 ~~~~--------------~~~~~~~~~-~------~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~ 793 (826)
.... .......+. . ......+.++++|+|+++|++|..+ ..+.+.+. ++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~-----~~~~~~~~-----~~ 232 (264)
T 1r3d_A 163 SSLNHEQRQTLIAQRSANLGSSVAHMLLATSLAKQPYLLPALQALKLPIHYVCGEQDSKF-----QQLAESSG-----LS 232 (264)
T ss_dssp TTCCHHHHHHHHHHHTTSCHHHHHHHHHHTCGGGCCCCHHHHHTCSSCEEEEEETTCHHH-----HHHHHHHC-----SE
T ss_pred hccCHHHHHHHHHHHhhcchHHHHHHHHhhhhccCccHHHHHHhcCCCEEEEEECCCchH-----HHHHHHhC-----Cc
Confidence 0000 000000111 0 1122345678999999999999743 22333332 56
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 794 VIVFPNDVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 794 ~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
+++++++||...... ..++.+.+.+|+.++.
T Consensus 233 ~~~i~~~gH~~~~e~-p~~~~~~i~~fl~~~~ 263 (264)
T 1r3d_A 233 YSQVAQAGHNVHHEQ-PQAFAKIVQAMIHSII 263 (264)
T ss_dssp EEEETTCCSCHHHHC-HHHHHHHHHHHHHHHC
T ss_pred EEEcCCCCCchhhcC-HHHHHHHHHHHHHHhc
Confidence 889999999875443 4478899999998765
No 214
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.61 E-value=4e-15 Score=157.03 Aligned_cols=216 Identities=12% Similarity=0.055 Sum_probs=132.6
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHHC--CcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcC
Q 003363 589 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 666 (826)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~--G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 666 (826)
.+..|.||++||.+.. ...|...+..|+++ ||.|+++|+|| +|.+... ....++++.+.+..+++..
T Consensus 33 ~~~~~~vvllHG~~~~--~~~~~~~~~~L~~~~~g~~vi~~D~~G---~G~s~~~------~~~~~~~~~~~l~~~~~~~ 101 (302)
T 1pja_A 33 RASYKPVIVVHGLFDS--SYSFRHLLEYINETHPGTVVTVLDLFD---GRESLRP------LWEQVQGFREAVVPIMAKA 101 (302)
T ss_dssp --CCCCEEEECCTTCC--GGGGHHHHHHHHHHSTTCCEEECCSSC---SGGGGSC------HHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCeEEEECCCCCC--hhHHHHHHHHHHhcCCCcEEEEeccCC---Cccchhh------HHHHHHHHHHHHHHHhhcC
Confidence 4456789999997655 45788889999988 99999999999 4444311 1135677777777777663
Q ss_pred CCCCCcEEEEEecchHHHHHHHHHhCCC-ceeEEEecCCccchhhhc------cCCCCCCchhhh-hccC----cCCccC
Q 003363 667 LANPSKVTVVGGSHGGFLTTHLIGQAPD-KFVAAAARNPLCNLALMV------GTTDIPDWCYVE-SYGS----KGKDSF 734 (826)
Q Consensus 667 ~~d~~rv~l~G~S~GG~~a~~~a~~~p~-~~~a~v~~~p~~~~~~~~------~~~~~~~~~~~~-~~~~----~~~~~~ 734 (826)
.+++.|+|||+||.+++.++.++|+ +++++|+.++........ ............ .+.. .....+
T Consensus 102 ---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (302)
T 1pja_A 102 ---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNY 178 (302)
T ss_dssp ---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCTTCBCSCCHHHHHHCTTCCHHHHHHHHTSTTGGGSTGGGG
T ss_pred ---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCcccccccchhhhhHHHHHHHHHHhhccchHHHHHhhhhhc
Confidence 4789999999999999999999999 799999988754321000 000000000000 0000 000001
Q ss_pred CCCCC-hhhH-------HHHhhcC-------cccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHH---------------
Q 003363 735 TESPS-VEDL-------TRFHSKS-------PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARA--------------- 784 (826)
Q Consensus 735 ~~~~~-~~~~-------~~~~~~s-------p~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~--------------- 784 (826)
...+. .+.. ..+.... ....+.+++ |+|+++|++|..+|++.+..+.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 1pja_A 179 WHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLRVG-HLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVY 257 (302)
T ss_dssp BCCTTCHHHHHHHCSSHHHHTTSSCCTTHHHHHHHHTTCS-EEEEEECTTCSSSSSGGGGGTCEECTTCCEECGGGSHHH
T ss_pred ccChhhhhhhhccchHHHHhhcCCccccchhHHHHHhccC-cEEEEEeCCCCccchhHhhHhhhcCCcccccchhhhhhh
Confidence 11111 1110 0000000 123467788 999999999999999887666322
Q ss_pred ---------HHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 003363 785 ---------LREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWF 821 (826)
Q Consensus 785 ---------l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~ 821 (826)
+... .+++++++|++||...... ...+.+.+.+|+
T Consensus 258 ~~~~~~~~~l~~~-~~~~~~~i~~~gH~~~~e~-p~~~~~~i~~fl 301 (302)
T 1pja_A 258 LRDSFGLKTLLAR-GAIVRCPMAGISHTAWHSN-RTLYETCIEPWL 301 (302)
T ss_dssp HTTTTSHHHHHHT-TCEEEEECSSCCTTTTTSC-HHHHHHHTGGGC
T ss_pred hhhhhchhhHhhc-CCeEEEEecCccccccccC-HHHHHHHHHHhc
Confidence 1111 2389999999999876443 446666666664
No 215
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.60 E-value=3e-15 Score=155.72 Aligned_cols=211 Identities=17% Similarity=0.128 Sum_probs=130.5
Q ss_pred CeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHH-CCcEEEEECCCCCCCCc-----hhhhhcC---
Q 003363 573 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFG-----EEALQSL--- 643 (826)
Q Consensus 573 g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~Vl~~d~rG~~g~G-----~~~~~~~--- 643 (826)
+.++..++|.|+++++.+++|+|+++||+.... .......+.|++ .+..|+.+++++...+. .++....
T Consensus 24 ~~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~--~~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~~~R~~d~~~~~~~~ 101 (278)
T 2gzs_A 24 TRHYRVWTAVPNTTAPASGYPILYMLDGNAVMD--RLDDELLKQLSEKTPPVIVAVGYQTNLPFDLNSRAYDYTPAAESR 101 (278)
T ss_dssp SCEEEEEEEEESSCCCTTCEEEEEESSHHHHHH--HCCHHHHHHHTTSCCCEEEEEEESSSSSCCHHHHHHHTCCGGGGT
T ss_pred CceEEEEEECCCCCCCCCCCCEEEEeeChhHHH--HHHHHHHHHhccCCCeEEEEEcCCCCCcCcccccccccCCCCccc
Confidence 578899999999987778899887777743210 111223445554 67888889987532111 1111000
Q ss_pred -C-------CCCCcchHHHHHHH-----HHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhh
Q 003363 644 -P-------GKVGSQDVNDVLTA-----IDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLAL 710 (826)
Q Consensus 644 -~-------~~~~~~~~~D~~~~-----i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~ 710 (826)
+ .... ....++.+. +.++.++..+|++|++|+|+||||++++.++.+ |++|+++++.+|...+..
T Consensus 102 ~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~~~~~~s~~~~~~~ 179 (278)
T 2gzs_A 102 KTDLHSGRFSRKS-GGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFRSYYSASPSLGRGY 179 (278)
T ss_dssp TCSCC-----CCC-CCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCSEEEEESGGGSTTH
T ss_pred cccccccCcCCCc-CCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccCeEEEeCcchhcCc
Confidence 0 0000 112232222 233344455788899999999999999999999 999999999998653211
Q ss_pred hccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCC--------CcHHHHHHH
Q 003363 711 MVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRV--------PVSNGLQYA 782 (826)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~v--------p~~~~~~~~ 782 (826)
. ..........+ . ..-..|+++.+|+.|..+ +..++++++
T Consensus 180 ~-----------------------------~~~~~~~~~~~--~-~~~~~~i~l~~G~~d~~~~~~~~~~~~~~~~~~~~ 227 (278)
T 2gzs_A 180 D-----------------------------ALLSRVTAVEP--L-QFCTKHLAIMEGSATQGDNRETHAVGVLSKIHTTL 227 (278)
T ss_dssp H-----------------------------HHHHHHHTSCT--T-TTTTCEEEEEECCC-----------CHHHHHHHHH
T ss_pred c-----------------------------hHHHHHHHhhc--c-CCCCCcEEEEecCccccccccchhhhhHHHHHHHH
Confidence 0 00000001100 0 112468999999999864 478999999
Q ss_pred HHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 783 RALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 783 ~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
++|+++|+++++.++||++|..... ..+...+.||.+
T Consensus 228 ~~L~~~g~~~~~~~~~g~~H~~~~~----~~~~~~l~fl~~ 264 (278)
T 2gzs_A 228 TILKDKGVNAVFWDFPNLGHGPMFN----ASFRQALLDISG 264 (278)
T ss_dssp HHHHHTTCCEEEEECTTCCHHHHHH----HHHHHHHHHHTT
T ss_pred HHHHcCCCeeEEEEcCCCCccchhH----HHHHHHHHHHhh
Confidence 9999999999999999999975321 223445667754
No 216
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.60 E-value=6.2e-15 Score=156.98 Aligned_cols=211 Identities=15% Similarity=0.193 Sum_probs=126.7
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
+.|.||++||.+.. ...|...+..|++. |.|+++|+||. |.+.. + ......++++.+.+..+++. ++.
T Consensus 42 ~~~~vvllHG~~~~--~~~w~~~~~~L~~~-~~via~Dl~Gh---G~S~~---~-~~~~~~~~~~a~dl~~ll~~--l~~ 109 (318)
T 2psd_A 42 AENAVIFLHGNATS--SYLWRHVVPHIEPV-ARCIIPDLIGM---GKSGK---S-GNGSYRLLDHYKYLTAWFEL--LNL 109 (318)
T ss_dssp TTSEEEEECCTTCC--GGGGTTTGGGTTTT-SEEEEECCTTS---TTCCC---C-TTSCCSHHHHHHHHHHHHTT--SCC
T ss_pred CCCeEEEECCCCCc--HHHHHHHHHHhhhc-CeEEEEeCCCC---CCCCC---C-CCCccCHHHHHHHHHHHHHh--cCC
Confidence 34689999997754 44676667777654 79999999994 44321 1 11223567777777777765 344
Q ss_pred -CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchh-hhccCCCCCC-c----------------hhhhhccCcCC
Q 003363 671 -SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA-LMVGTTDIPD-W----------------CYVESYGSKGK 731 (826)
Q Consensus 671 -~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~-~~~~~~~~~~-~----------------~~~~~~~~~~~ 731 (826)
+++.|+||||||.+++.+|.++|++++++|+.++..... .......... + .+...+...
T Consensus 110 ~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 187 (318)
T 2psd_A 110 PKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEKMVLENNFFVETVLPS-- 187 (318)
T ss_dssp CSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEECCSCBSCCTTSCSCHHHHHHHHSTHHHHHHTTTCHHHHTHHHH--
T ss_pred CCCeEEEEEChhHHHHHHHHHhChHhhheEEEeccccCCccchhhhhhHHHHHHHHhcccchhhhhcchHHHHhhccc--
Confidence 789999999999999999999999999999876432110 0000000000 0 000000000
Q ss_pred ccCCCCCChhhHHH-----------------HhhcC----------------cccccCCC-CCcEEEEEeCCCCCCCcHH
Q 003363 732 DSFTESPSVEDLTR-----------------FHSKS----------------PISHISKV-KTPTIFLLGAQDLRVPVSN 777 (826)
Q Consensus 732 ~~~~~~~~~~~~~~-----------------~~~~s----------------p~~~~~~i-~~PvLii~G~~D~~vp~~~ 777 (826)
........+.... +.... ....+.++ ++|+|+++|++| .+++ .
T Consensus 188 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~P~Lvi~G~~D-~~~~-~ 264 (318)
T 2psd_A 188 -KIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESDPG-FFSN-A 264 (318)
T ss_dssp -TCSSCCCHHHHHHHHGGGCSSSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEEEEEEEEC-SSHH-H
T ss_pred -cccccCCHHHHHHHHHhhcCccccccchhcccccccccccccchhHHHHHHHHHHhccccCCCeEEEEeccc-cCcH-H
Confidence 0000000000000 00000 01124567 999999999999 8876 6
Q ss_pred HHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 778 GLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 778 ~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
+..+.+.+. ..+++++ ++||..... ...++.+.|.+||.+.
T Consensus 265 ~~~~~~~~~----~~~~~~i-~~gH~~~~e-~p~~~~~~i~~fl~~~ 305 (318)
T 2psd_A 265 IVEGAKKFP----NTEFVKV-KGLHFLQED-APDEMGKYIKSFVERV 305 (318)
T ss_dssp HHHHHTTSS----SEEEEEE-EESSSGGGT-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCC----CcEEEEe-cCCCCCHhh-CHHHHHHHHHHHHHHh
Confidence 555555443 3678888 679976544 4568889999999865
No 217
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.60 E-value=1e-13 Score=149.39 Aligned_cols=266 Identities=11% Similarity=0.135 Sum_probs=148.3
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (826)
+||||+ + |..+... ....++++++.++ ..+.+... ..........+|||||++|++....+ +.-.+|.
T Consensus 47 ~spdg~-l-~~~~~~~-----~~~~v~~~~~~~g--~~~~~~~~--~~~~~~p~~~a~spdg~~l~~~~~~~-~~v~v~~ 114 (347)
T 3hfq_A 47 LSAKDC-L-YSVDKED-----DEGGIAAWQIDGQ--TAHKLNTV--VAPGTPPAYVAVDEARQLVYSANYHK-GTAEVMK 114 (347)
T ss_dssp ECTTCE-E-EEEEEET-----TEEEEEEEEEETT--EEEEEEEE--EEESCCCSEEEEETTTTEEEEEETTT-TEEEEEE
T ss_pred EccCCe-E-EEEEecC-----CCceEEEEEecCC--cEEEeeee--ecCCCCCEEEEECCCCCEEEEEeCCC-CEEEEEE
Confidence 489998 5 4433321 2457778777432 22333221 00113467789999999998776432 3334444
Q ss_pred EecCCceeEEEecCCCccccc--cCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeec
Q 003363 184 LWSQSQLEKEFHVPQTVHGSV--YADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 261 (826)
Q Consensus 184 i~~~~~~~~~~~~~~~~~g~v--~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (826)
+..++....+........+.. -.......++|||||+ |+. +..
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v-~~~--------------------------------- 159 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAV-IDL--------------------------------- 159 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEE-EET---------------------------------
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEE-EeC---------------------------------
Confidence 444445444433321111100 0001125689999999 544 332
Q ss_pred CCCccCCCccCceEEEEEcc-CCceEecc--CCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceE
Q 003363 262 DWGETYAGKRQPSLFVININ-SGEVQAVK--GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 338 (826)
Q Consensus 262 d~g~~~~~~~~~~l~v~d~~-~g~~~~l~--~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~ 338 (826)
....|++|+++ +|++..+. .......+..++|+|||+. |++... ....++
T Consensus 160 ---------~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~----l~v~~~--------------~~~~v~ 212 (347)
T 3hfq_A 160 ---------GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQY----AFLAGE--------------LSSQIA 212 (347)
T ss_dssp ---------TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSE----EEEEET--------------TTTEEE
T ss_pred ---------CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCE----EEEEeC--------------CCCEEE
Confidence 22578899987 66655431 1222234567899999997 766542 122455
Q ss_pred EEEcccccchhhhhhhhcCCCCCCcceec---CCC------CccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEE
Q 003363 339 AVRVSLYKSEASELELKESSSEDLPVVNL---TES------ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 409 (826)
Q Consensus 339 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~L---t~~------~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~ 409 (826)
+++++. .+++.+.+ ... ......++|||||++|+...... ..|.+|
T Consensus 213 v~~~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~----------~~v~v~ 267 (347)
T 3hfq_A 213 SLKYDT---------------QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY----------NTLAVF 267 (347)
T ss_dssp EEEEET---------------TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT----------TEEEEE
T ss_pred EEEecC---------------CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC----------CEEEEE
Confidence 555521 23332221 111 12356689999999886555332 468888
Q ss_pred eCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec
Q 003363 410 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 484 (826)
Q Consensus 410 d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt 484 (826)
+++.++... .+..+.. .+ ..+..++|+|||++|+++....+...+|.+|..+|+++++.
T Consensus 268 ~~~~~g~~~-------~~~~~~~--~~-------~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 268 AVTADGHLT-------LIQQIST--EG-------DFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EECGGGCEE-------EEEEEEC--SS-------SCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EECCCCcEE-------EeEEEec--CC-------CCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 876432110 1111111 00 12346789999998887766667888999999999988764
No 218
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.60 E-value=6.6e-16 Score=161.99 Aligned_cols=215 Identities=13% Similarity=0.139 Sum_probs=129.4
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (826)
.|+||++||.+.......|...+..|+ +||.|+++|+||.+ .+.. .......++++.+.+..+++.- ..+
T Consensus 41 ~p~vv~lHG~G~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G---~S~~----~~~~~~~~~~~~~~l~~~l~~~--~~~ 110 (292)
T 3l80_A 41 NPCFVFLSGAGFFSTADNFANIIDKLP-DSIGILTIDAPNSG---YSPV----SNQANVGLRDWVNAILMIFEHF--KFQ 110 (292)
T ss_dssp SSEEEEECCSSSCCHHHHTHHHHTTSC-TTSEEEEECCTTST---TSCC----CCCTTCCHHHHHHHHHHHHHHS--CCS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHHh-hcCeEEEEcCCCCC---CCCC----CCcccccHHHHHHHHHHHHHHh--CCC
Confidence 389999997433322346667777776 69999999999944 3321 1122345777777777777763 446
Q ss_pred cEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCC-CC-Cc-hhhhhccC---------cCCccCCCCCC
Q 003363 672 KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD-IP-DW-CYVESYGS---------KGKDSFTESPS 739 (826)
Q Consensus 672 rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~-~~-~~-~~~~~~~~---------~~~~~~~~~~~ 739 (826)
++.|+|||+||.+++.++.++|++++++|+.+|......+..... .. .. ........ .....+.....
T Consensus 111 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (292)
T 3l80_A 111 SYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLKTAADRLNYLKDLSRSHFSSQQ 190 (292)
T ss_dssp EEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCCCHHHHHHCTTSSSSHHHHHHHHTCCSHHHHHHHHHHHHHHHSCHHH
T ss_pred CeEEEEEchhHHHHHHHHHhCchheeeEEEECCCCcchhhhccccccchhHHHHHHHHhccCchhhhHhhccccccCHHH
Confidence 899999999999999999999999999999996443221111000 00 00 00000000 00000000000
Q ss_pred --------hhhHHHHhhcCc---------------ccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEE
Q 003363 740 --------VEDLTRFHSKSP---------------ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIV 796 (826)
Q Consensus 740 --------~~~~~~~~~~sp---------------~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~ 796 (826)
......+....+ ...+.+ ++|+|+++|++|..++++ + .+.+.+. ..+ ++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~-~~P~lii~g~~D~~~~~~-~-~~~~~~~----~~~-~~ 262 (292)
T 3l80_A 191 FKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGISE-KIPSIVFSESFREKEYLE-S-EYLNKHT----QTK-LI 262 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSTTCCSSCCCCGGGGCCCCCT-TSCEEEEECGGGHHHHHT-S-TTCCCCT----TCE-EE
T ss_pred HHHhHHHHHHHHHHHHhhhhccccchhhhhcchhhhhccCC-CCCEEEEEccCccccchH-H-HHhccCC----Cce-ee
Confidence 000011111111 123445 899999999999988777 5 5443333 356 89
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 003363 797 FPNDVHGIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 797 ~p~~~H~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
+++++|.+... ...++.+.|.+||+++-
T Consensus 263 ~~~~gH~~~~e-~p~~~~~~i~~fl~~~~ 290 (292)
T 3l80_A 263 LCGQHHYLHWS-ETNSILEKVEQLLSNHE 290 (292)
T ss_dssp ECCSSSCHHHH-CHHHHHHHHHHHHHTCT
T ss_pred eCCCCCcchhh-CHHHHHHHHHHHHHhcc
Confidence 99999976543 34578899999998764
No 219
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.59 E-value=3.6e-14 Score=151.48 Aligned_cols=269 Identities=10% Similarity=0.016 Sum_probs=167.7
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CC-ceeEEEecC-CCccccccCCCcccceeecCCCCeEEEEeecC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QS-QLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEP 229 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~-~~~~~~~~~-~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~ 229 (826)
..+...+|||||+.|+... . ..+.+|+ .+ ....+.... ....+. +..+.|+|||+.|+..+.+.
T Consensus 52 ~~v~~~~~~~~~~~l~~~~-d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~------v~~~~~~~~~~~l~~~~~d~ 119 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGG-K-----GCVKVWDISHPGNKSPVSQLDCLNRDNY------IRSCKLLPDGCTLIVGGEAS 119 (337)
T ss_dssp SCCCEEEECSSSSEEEEEC-B-----SEEEEEETTSTTCCSCSEEEECSCTTSB------EEEEEECTTSSEEEEEESSS
T ss_pred CceEEEEEecCCcEEEEcC-C-----CeEEEEECCCCCceeeeecccccCCCCc------EEEEEEcCCCCEEEEEcCCC
Confidence 3588899999999999875 2 2456662 22 111111111 112222 37899999999999887665
Q ss_pred CCCCCCccCCCCC--CCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC
Q 003363 230 SPSKPTFSLGSTK--GGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 307 (826)
Q Consensus 230 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~ 307 (826)
... .|+..... .......+........|.++....+++.....|++||+.+++..... ......+..++|+|||+
T Consensus 120 ~i~--~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~ 196 (337)
T 1gxr_A 120 TLS--IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDGASCIDISNDGT 196 (337)
T ss_dssp EEE--EEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSS
T ss_pred cEE--EEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeee-ecccCceEEEEECCCCC
Confidence 332 22221111 11111223333445667777545556666788999999988765441 23345678899999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEE
Q 003363 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 387 (826)
Q Consensus 308 ~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~ 387 (826)
. |+..+ .+..|+.+|+ .+++..........+....|+|||+.|+
T Consensus 197 ~----l~~~~---------------~dg~i~~~d~-----------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 240 (337)
T 1gxr_A 197 K----LWTGG---------------LDNTVRSWDL-----------------REGRQLQQHDFTSQIFSLGYCPTGEWLA 240 (337)
T ss_dssp E----EEEEE---------------TTSEEEEEET-----------------TTTEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred E----EEEEe---------------cCCcEEEEEC-----------------CCCceEeeecCCCceEEEEECCCCCEEE
Confidence 7 77665 3347889998 5555444444556678899999999988
Q ss_pred EEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCe
Q 003363 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 467 (826)
Q Consensus 388 f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~ 467 (826)
..+.+ ..|++||+.+++...+.. ....+..+.|+|||+.|+. ...++
T Consensus 241 ~~~~~-----------~~i~~~~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~l~~-~~~dg- 287 (337)
T 1gxr_A 241 VGMES-----------SNVEVLHVNKPDKYQLHL--------------------HESCVLSLKFAYCGKWFVS-TGKDN- 287 (337)
T ss_dssp EEETT-----------SCEEEEETTSSCEEEECC--------------------CSSCEEEEEECTTSSEEEE-EETTS-
T ss_pred EEcCC-----------CcEEEEECCCCCeEEEcC--------------------CccceeEEEECCCCCEEEE-ecCCC-
Confidence 77644 358999987754321110 1113446789999996654 33333
Q ss_pred EEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEe
Q 003363 468 QVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSS 507 (826)
Q Consensus 468 ~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s 507 (826)
.+..+|+.+++..........+....|+++++.++....
T Consensus 288 -~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 326 (337)
T 1gxr_A 288 -LLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSG 326 (337)
T ss_dssp -EEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEET
T ss_pred -cEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecC
Confidence 566678888887765555555666778888886665443
No 220
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.58 E-value=2.4e-13 Score=158.60 Aligned_cols=314 Identities=16% Similarity=0.124 Sum_probs=185.3
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (826)
.||||+.+++... ..+.++++. .+.....++... ..+...+|||||++||..+..+ .+.
T Consensus 26 ~spdg~~l~~~~~----------~~v~l~~~~-~~~~~~~~~~h~-----~~v~~~~~spdg~~lasg~~d~-----~v~ 84 (611)
T 1nr0_A 26 NTPAGDKIQYCNG----------TSVYTVPVG-SLTDTEIYTEHS-----HQTTVAKTSPSGYYCASGDVHG-----NVR 84 (611)
T ss_dssp ECTTSSEEEEEET----------TEEEEEETT-CSSCCEEECCCS-----SCEEEEEECTTSSEEEEEETTS-----EEE
T ss_pred eCCCCCEEEeCCC----------CEEEEecCC-CcccCeEecCCC-----CceEEEEECCCCcEEEEEeCCC-----CEE
Confidence 4899999998631 145555553 222233343333 4588999999999999876643 577
Q ss_pred Eec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC--CCCCccCCCCCCCCCCccCCCCCCccee
Q 003363 184 LWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP--SKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (826)
Q Consensus 184 i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (826)
+|+ .++......+ ....+.| ..++|||||+.||..+.+... ....|+. .........+...+....|
T Consensus 85 lWd~~~~~~~~~~~~-~~~~~~v------~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~~~v~~v~f 155 (611)
T 1nr0_A 85 IWDTTQTTHILKTTI-PVFSGPV------KDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTGQARAMNSVDF 155 (611)
T ss_dssp EEESSSTTCCEEEEE-ECSSSCE------EEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCCCCSSCEEEEEE
T ss_pred EeECCCCcceeeEee-cccCCce------EEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceecCCCCCceEEEE
Confidence 884 2222211111 1222333 899999999999988764321 1122331 2222334456666677889
Q ss_pred ecCCCc-cCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceE
Q 003363 260 EEDWGE-TYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 338 (826)
Q Consensus 260 ~~d~g~-~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~ 338 (826)
.|+... ..++..+..|.+||..+++..... ......+..++|+|||+. |+..+ .+..|.
T Consensus 156 ~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l-~~H~~~V~~v~fspdg~~----las~s---------------~D~~i~ 215 (611)
T 1nr0_A 156 KPSRPFRIISGSDDNTVAIFEGPPFKFKSTF-GEHTKFVHSVRYNPDGSL----FASTG---------------GDGTIV 215 (611)
T ss_dssp CSSSSCEEEEEETTSCEEEEETTTBEEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSCEE
T ss_pred CCCCCeEEEEEeCCCeEEEEECCCCeEeeee-ccccCceEEEEECCCCCE----EEEEE---------------CCCcEE
Confidence 888543 456667788999998877654431 233446789999999997 77666 334688
Q ss_pred EEEcccccchhhhhhhhcCCCCCCcc-eecC-------CCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEe
Q 003363 339 AVRVSLYKSEASELELKESSSEDLPV-VNLT-------ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID 410 (826)
Q Consensus 339 ~~d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt-------~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d 410 (826)
++|+ .+++. ..+. .+.+.+....|||||++|+..+.+ ..|.+||
T Consensus 216 lwd~-----------------~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----------~~v~lWd 267 (611)
T 1nr0_A 216 LYNG-----------------VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----------KTIKIWN 267 (611)
T ss_dssp EEET-----------------TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----------SEEEEEE
T ss_pred EEEC-----------------CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC-----------CeEEEEe
Confidence 8887 34433 2332 456678889999999999876654 4588888
Q ss_pred CCCCCCCCccc----------------------ceeeeeeeeeccCCC---CCcccccCCCCCCccccCCCEEEEEEEeC
Q 003363 411 WPTNGNFSSLE----------------------KIVDVIPVVQCAEGD---CFPGLYSSSILSNPWLSDGCTMLLSSIWG 465 (826)
Q Consensus 411 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~---~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~ 465 (826)
+.+++...... ..+..+.++...... .+.| +...+..++|+|||+.|+ +...+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g-h~~~v~~l~~spdg~~l~-s~s~D 345 (611)
T 1nr0_A 268 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG-HNKAITALSSSADGKTLF-SADAE 345 (611)
T ss_dssp TTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEE-EEETT
T ss_pred CCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC-CCCCEEEEEEeCCCCEEE-EEeCC
Confidence 87754321000 000111222211100 0111 223455788999999665 44444
Q ss_pred CeEEEEEEECCCCcEEEecCC--CCCeeeEEEeecC
Q 003363 466 SSQVIISVNVSSGELLRITPA--ESNFSWSLLTLDG 499 (826)
Q Consensus 466 ~~~~l~~vdl~tg~~~~lt~~--~~~~~~~~~s~dg 499 (826)
+ .+..+|+.+++..++... ...+....+++++
T Consensus 346 ~--~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 346 G--HINSWDISTGISNRVFPDVHATMITGIKTTSKG 379 (611)
T ss_dssp S--CEEEEETTTCCEEECSSCSCSSCEEEEEECTTS
T ss_pred C--cEEEEECCCCceeeecccCCcceEEEEEECCCC
Confidence 4 455668888887766422 2234444556443
No 221
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=99.35 E-value=1.6e-16 Score=167.22 Aligned_cols=220 Identities=12% Similarity=0.192 Sum_probs=125.5
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
+.|+||++||.+.. ...|...+..|+ +||.|+++|+||.+ .+..............+++.+.+..+++. ++.
T Consensus 24 ~~p~vv~lHG~~~~--~~~~~~~~~~l~-~g~~v~~~D~~G~G---~s~~~~~~~~~~~~~~~~~~~~l~~~l~~--l~~ 95 (304)
T 3b12_A 24 SGPALLLLHGFPQN--LHMWARVAPLLA-NEYTVVCADLRGYG---GSSKPVGAPDHANYSFRAMASDQRELMRT--LGF 95 (304)
Confidence 45789999997654 446777778887 79999999999944 43321100001122334444444444433 344
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhccCCC-----------------CCCch-------hhhh-
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMVGTTD-----------------IPDWC-------YVES- 725 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~~~~~-----------------~~~~~-------~~~~- 725 (826)
+++.|+|||+||.+++.++.++|++++++|+.+|............ ..... +...
T Consensus 96 ~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
T 3b12_A 96 ERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEVDRFVARAYWHWYFLQQPAPYPEKVIGADPDTFYEGC 175 (304)
Confidence 6899999999999999999999999999999988654221100000 00000 0000
Q ss_pred cc-----------CcCCccCCCC---CC--hhhHHHHhhc---C----cccccCCCCCcEEEEEeCCCCCC-CcHHHHHH
Q 003363 726 YG-----------SKGKDSFTES---PS--VEDLTRFHSK---S----PISHISKVKTPTIFLLGAQDLRV-PVSNGLQY 781 (826)
Q Consensus 726 ~~-----------~~~~~~~~~~---~~--~~~~~~~~~~---s----p~~~~~~i~~PvLii~G~~D~~v-p~~~~~~~ 781 (826)
+. ......+... +. ......+... + ....+.++++|+|+++|++|..+ +......+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~G~~D~~~~~~~~~~~~ 255 (304)
T 3b12_A 176 LFGWGATGADGFDPEQLEEYRKQWRDPAAIHGSCCDYRAGGTIDFELDHGDLGRQVQCPALVFSGSAGLMHSLFEMQVVW 255 (304)
Confidence 00 0000000000 00 0000000000 0 00115788999999999999655 44444444
Q ss_pred HHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 003363 782 ARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKY 824 (826)
Q Consensus 782 ~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~ 824 (826)
.+.+. .++++++ ++||.+..... .++.+.|.+||+++
T Consensus 256 ~~~~~----~~~~~~i-~~gH~~~~e~p-~~~~~~i~~fl~~~ 292 (304)
T 3b12_A 256 APRLA----NMRFASL-PGGHFFVDRFP-DDTARILREFLSDA 292 (304)
Confidence 44433 3677788 99998765443 47788899999765
No 222
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.57 E-value=8.6e-13 Score=140.82 Aligned_cols=258 Identities=9% Similarity=-0.012 Sum_probs=148.0
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEE-EEeCCCCCeEEEEecCCCCCC
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASA-VVPSPSGSKLLVVRNPENESP 179 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~-~~~SPdG~~la~~~~~~~~~~ 179 (826)
...++|||+.+++.... ...++.+++.+.......++.. ..... ++|||||++|+ +....++..
T Consensus 44 ~~~~s~dg~~l~~~~~~--------~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~-~~~~~~~~~ 108 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDF--------CQTLVQIETQLEPPKVVAIQEG------QSSMADVDITPDDQFAV-TVTGLNHPF 108 (331)
T ss_dssp EEEECSSSCEEEEEEST--------TCEEEEEECSSSSCEEEEEEEC------SSCCCCEEECTTSSEEE-ECCCSSSSC
T ss_pred eEEEcCCCCEEEEEeCC--------CCeEEEEECCCCceeEEecccC------CCCccceEECCCCCEEE-EecCCCCcc
Confidence 44568999977554321 2367777653321102223222 23445 89999999998 544332222
Q ss_pred eEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcce
Q 003363 180 IQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 258 (826)
Q Consensus 180 ~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (826)
.+..++ ..++..+.+...... ..+.|||||++|++.....
T Consensus 109 ~i~v~d~~~~~~~~~~~~~~~~----------~~~~~spdg~~l~~~~~~~----------------------------- 149 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIPYDA----------VGIAISPNGNGLILIDRSS----------------------------- 149 (331)
T ss_dssp EEEEEETTTTEEEEEEECCTTE----------EEEEECTTSSCEEEEEETT-----------------------------
T ss_pred cEEEEECCCCCeEEEEECCCCc----------cceEECCCCCEEEEEecCC-----------------------------
Confidence 455554 455555555443333 6899999999887764432
Q ss_pred eecCCCccCCCccCce-EEEEEccC-Cce----EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeecc
Q 003363 259 WEEDWGETYAGKRQPS-LFVININS-GEV----QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYN 332 (826)
Q Consensus 259 ~~~d~g~~~~~~~~~~-l~v~d~~~-g~~----~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~ 332 (826)
.. |++|+++. |.+ ... .........++|+|||+. |++...
T Consensus 150 --------------~~~i~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~spdg~~----l~v~~~-------------- 195 (331)
T 3u4y_A 150 --------------ANTVRRFKIDADGVLFDTGQEF--ISGGTRPFNITFTPDGNF----AFVANL-------------- 195 (331)
T ss_dssp --------------TTEEEEEEECTTCCEEEEEEEE--ECSSSSEEEEEECTTSSE----EEEEET--------------
T ss_pred --------------CceEEEEEECCCCcEeecCCcc--ccCCCCccceEECCCCCE----EEEEeC--------------
Confidence 23 66666543 222 111 122334678899999997 766652
Q ss_pred CCCceEEEEcccccchhhhhhhhcCCCCCCcc----eecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEE
Q 003363 333 RPCALYAVRVSLYKSEASELELKESSSEDLPV----VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHR 408 (826)
Q Consensus 333 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~ 408 (826)
....|+++|+ .+++. ..+. .......+.|||||++|+..... ...|++
T Consensus 196 ~~~~v~v~d~-----------------~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~----------~~~i~~ 247 (331)
T 3u4y_A 196 IGNSIGILET-----------------QNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTES----------TVDVFN 247 (331)
T ss_dssp TTTEEEEEEC-----------------SSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSS----------EEEEEE
T ss_pred CCCeEEEEEC-----------------CCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcC----------CCEEEE
Confidence 2347889998 44443 3333 33456789999999987665432 246999
Q ss_pred EeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC
Q 003363 409 IDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA 486 (826)
Q Consensus 409 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~ 486 (826)
+|+.+++...+..- ..-+.. +.. .......++|+|||++|+++.... ..+..+|+.+..+..+...
T Consensus 248 ~d~~~~~~~~~~~~----~~~~~~--~~~----~~~~~~~~~~spdg~~l~v~~~~~--~~v~v~d~~~~~~~~~~~~ 313 (331)
T 3u4y_A 248 FNQLSGTLSFVKSF----GHGLLI--DPR----PLFGANQMALNKTETKLFISANIS--RELKVFTISGKVVGYVAGI 313 (331)
T ss_dssp EETTTTEEEEEEEE----ECCCCC--CCG----GGTTCCCEEECTTSSEEEEEETTT--TEEEEEETTSCEEEECTTC
T ss_pred EECCCCceeeeccc----cccccc--CCC----CcccccceEECCCCCEEEEecCCC--CcEEEEEecCCcccceecc
Confidence 99887654221100 000000 000 001123568999999888765433 3566678877776665443
No 223
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.56 E-value=4.5e-13 Score=142.99 Aligned_cols=261 Identities=11% Similarity=0.012 Sum_probs=154.6
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCC-CccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 156 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ-TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~-~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
...++|||||+++++..... ..++.++ .+++....+.... ..++ .....+.|||||++|++.......
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~---~~v~~~d~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~~-- 105 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKS---ESLVKIDLVTGETLGRIDLSTPEERV-----KSLFGAALSPDGKTLAIYESPVRL-- 105 (337)
T ss_dssp CCCEEECTTSSEEEEEETTT---TEEEEEETTTCCEEEEEECCBTTEEE-----ECTTCEEECTTSSEEEEEEEEEEE--
T ss_pred ccceEEcCCCCEEEEEeCCC---CeEEEEECCCCCeEeeEEcCCccccc-----ccccceEECCCCCEEEEEeccccc--
Confidence 56789999999987765432 3465555 4555555444332 0000 012689999999998887432100
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEE
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (826)
.++|.. .....|+++|+++++.... ......+..++|+|||+. |
T Consensus 106 --------------------------~~~~~~----~~~~~i~v~d~~~~~~~~~--~~~~~~~~~~~~s~dg~~----l 149 (337)
T 1pby_B 106 --------------------------ELTHFE----VQPTRVALYDAETLSRRKA--FEAPRQITMLAWARDGSK----L 149 (337)
T ss_dssp --------------------------CSSCEE----ECCCEEEEEETTTTEEEEE--EECCSSCCCEEECTTSSC----E
T ss_pred --------------------------cccccc----ccCceEEEEECCCCcEEEE--EeCCCCcceeEECCCCCE----E
Confidence 000000 0136899999998876654 233345667899999998 8
Q ss_pred EEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccC
Q 003363 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 393 (826)
Q Consensus 314 vf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~ 393 (826)
++.. ..|+++|+ .+++...............|+|||++|++.....
T Consensus 150 ~~~~-----------------~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 195 (337)
T 1pby_B 150 YGLG-----------------RDLHVMDP-----------------EAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESS 195 (337)
T ss_dssp EEES-----------------SSEEEEET-----------------TTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTT
T ss_pred EEeC-----------------CeEEEEEC-----------------CCCcEeeeeeccccCCCceeCCCccEEeeeccCC
Confidence 7762 16999998 5555443322222223558999999876544322
Q ss_pred CCC----------CC---CCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEE
Q 003363 394 SVD----------SG---AHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 460 (826)
Q Consensus 394 ~~~----------~g---~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~ 460 (826)
... .+ +......|+++|+.+++...+. +.+ .......+.|+|||+.|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-----~~~-------------~~~~~~~~~~s~dg~~l~~ 257 (337)
T 1pby_B 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE-----VRI-------------MDVFYFSTAVNPAKTRAFG 257 (337)
T ss_dssp TEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEE-----EEE-------------CSSCEEEEEECTTSSEEEE
T ss_pred CceeeeeeccccccccccccccccceEEEeCCCCCceEee-----cCC-------------CCCceeeEEECCCCCEEEE
Confidence 100 00 0001126889998876542111 000 0012235789999998876
Q ss_pred EEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 461 SSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 461 ~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
. ...|+.+|+.+++...............|+++|+.+++. .. ...|.+.++.+.
T Consensus 258 ~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~---~~~i~v~d~~~~ 311 (337)
T 1pby_B 258 A-----YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG-GA---LGDLAAYDAETL 311 (337)
T ss_dssp E-----ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE-SB---SSEEEEEETTTC
T ss_pred e-----CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEE-cC---CCcEEEEECcCC
Confidence 6 357899999998876554433334556889999977765 22 356888886544
No 224
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.55 E-value=2.8e-12 Score=137.91 Aligned_cols=234 Identities=11% Similarity=0.043 Sum_probs=147.9
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEe-cCCCccccccCCCcccceeecCCCCeEEEEeecCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFH-VPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~-~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~ 230 (826)
..+...+||||+ +|+..+..+ .+.+| ..++...... ...+..+.| ..++|||||++|+..+.+
T Consensus 83 ~~v~~~~~s~d~-~l~~~s~dg-----~v~lWd~~~~~~~~~~~~~~~~H~~~V------~~v~~spdg~~l~sgs~d-- 148 (344)
T 4gqb_B 83 AGVADLTWVGER-GILVASDSG-----AVELWELDENETLIVSKFCKYEHDDIV------STVSVLSSGTQAVSGSKD-- 148 (344)
T ss_dssp SCEEEEEEETTT-EEEEEETTS-----EEEEEEECTTSSCEEEEEEEECCSSCE------EEEEECTTSSEEEEEETT--
T ss_pred CCEEEEEEeCCC-eEEEEECCC-----EEEEEeccCCCceeEeeccccCCCCCE------EEEEECCCCCEEEEEeCC--
Confidence 358899999996 455554432 45666 2333322222 112333334 899999999999886543
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCc
Q 003363 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 310 (826)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (826)
..|.+||+.+++..... ......+..++|+||++.
T Consensus 149 ------------------------------------------~~i~iwd~~~~~~~~~~-~~h~~~V~~~~~~~~~~~-- 183 (344)
T 4gqb_B 149 ------------------------------------------ICIKVWDLAQQVVLSSY-RAHAAQVTCVAASPHKDS-- 183 (344)
T ss_dssp ------------------------------------------SCEEEEETTTTEEEEEE-CCCSSCEEEEEECSSCTT--
T ss_pred ------------------------------------------CeEEEEECCCCcEEEEE-cCcCCceEEEEecCCCCC--
Confidence 46899999998765441 233456788999999988
Q ss_pred cEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCC--CCccccCceecCCCCEEE
Q 003363 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTE--SISSAFFPRFSPDGKFLV 387 (826)
Q Consensus 311 ~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~--~~~~~~~p~~SpDG~~l~ 387 (826)
++.++. .+..|.++|+ .+++ ...+.. .........|+|++..++
T Consensus 184 --~l~s~s--------------~D~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 230 (344)
T 4gqb_B 184 --VFLSCS--------------EDNRILLWDT-----------------RCPKPASQIGCSAPGYLPTSLAWHPQQSEVF 230 (344)
T ss_dssp --EEEEEE--------------TTSCEEEEET-----------------TSSSCEEECC----CCCEEEEEECSSCTTEE
T ss_pred --ceeeec--------------cccccccccc-----------------cccceeeeeecceeeccceeeeecCCCCcce
Confidence 766552 2347888998 4444 334432 233466789999765544
Q ss_pred EEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCe
Q 003363 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 467 (826)
Q Consensus 388 f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~ 467 (826)
.....+ ..|.+||+.+++....... +...+..++|+|||..++++...++.
T Consensus 231 ~sg~~d----------g~v~~wd~~~~~~~~~~~~-------------------h~~~v~~v~fsp~g~~~lasgs~D~~ 281 (344)
T 4gqb_B 231 VFGDEN----------GTVSLVDTKSTSCVLSSAV-------------------HSQCVTGLVFSPHSVPFLASLSEDCS 281 (344)
T ss_dssp EEEETT----------SEEEEEESCC--CCEEEEC-------------------CSSCEEEEEECSSSSCCEEEEETTSC
T ss_pred EEeccC----------CcEEEEECCCCcEEEEEcC-------------------CCCCEEEEEEccCCCeEEEEEeCCCe
Confidence 333322 4689999887654321111 11234567899999777776665555
Q ss_pred EEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCC
Q 003363 468 QVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 510 (826)
Q Consensus 468 ~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~ 510 (826)
..| +|+.++++.++......+....|+|+++.++++++...
T Consensus 282 i~v--wd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~ 322 (344)
T 4gqb_B 282 LAV--LDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDH 322 (344)
T ss_dssp EEE--ECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred EEE--EECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCC
Confidence 444 58889988877665556666789999988877766443
No 225
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.55 E-value=4.2e-13 Score=140.21 Aligned_cols=261 Identities=10% Similarity=0.074 Sum_probs=181.1
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCC--------
Q 003363 105 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN-------- 176 (826)
Q Consensus 105 s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~-------- 176 (826)
+.||.+|.|+... + ...|+.++ .++...++|+.. ...-++|+|++|+|+....+
T Consensus 22 ~~~g~~iy~~n~~-d------~~~ly~~~--~dg~~~~~l~~~---------~~~~i~~~g~~Iyy~~~~~~~~~~~~~~ 83 (302)
T 3s25_A 22 CESDGEVFFSNTN-D------NGRLYAMN--IDGSNIHKLSND---------TAMYINADKNYVYYVRNNNQKITSQTFF 83 (302)
T ss_dssp EEETTEEEEEEGG-G------TTEEEEEE--TTSCSCEEEEEE---------EEEEEEECSSEEEEEEECC------CCS
T ss_pred EEeCCEEEEEeCC-C------CceEEEEc--CCCCCCEEccCC---------ceeeEEEcCCEEEEEECCCCccccccee
Confidence 4788999887432 1 24677765 455566666543 23466899999999987642
Q ss_pred --CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCC
Q 003363 177 --ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSW 253 (826)
Q Consensus 177 --~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (826)
....++.+. ++++.++++. . .+..|+|+|++|+|......
T Consensus 84 ~~n~~~Iy~i~~dg~~~~~l~~---~-----------~~~~~s~~g~~Iy~~~~~~~----------------------- 126 (302)
T 3s25_A 84 SYDRNSLCRIKRNGHGSTVLDP---D-----------PCIYASLIGNYIYYLHYDTQ----------------------- 126 (302)
T ss_dssp SCCSEEEEEEETTSCCCEEEEC---S-----------CEEEEEEETTEEEEEEESSS-----------------------
T ss_pred ccCCCeEEEEeCCCCcceEeec---C-----------CccEEEEeCCEEEEEeecCC-----------------------
Confidence 134577787 4445444442 2 24579999999999851110
Q ss_pred CCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccC
Q 003363 254 KGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNR 333 (826)
Q Consensus 254 ~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~ 333 (826)
....||++++++.+.++|+ .... ..|+|+|+. |+|+.. .
T Consensus 127 -----------------~~~~Iy~~~~dGs~~~~lt--~~~~----~~~~~~g~~----iy~t~~--------------g 165 (302)
T 3s25_A 127 -----------------TATSLYRIRIDGEEKKKIK--NHYL----FTCNTSDRY----FYYNNP--------------K 165 (302)
T ss_dssp -----------------SCEEEEEEETTSCCCEEEE--SSCC----CCSEEETTE----EEEECT--------------T
T ss_pred -----------------CCceEEEEECCCCCeEEEe--CCCc----eEeeEECCE----EEEEeC--------------C
Confidence 3478999999998888883 3332 357899999 999873 2
Q ss_pred CCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCC
Q 003363 334 PCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 413 (826)
Q Consensus 334 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~ 413 (826)
...||++++ +++..++|..+.. ..| ++|+|++|+|..... ..+|+++++++
T Consensus 166 ~~~Iy~~~l-----------------~g~~~~~l~~~~~--~~~-~~P~g~~iy~t~~~~---------~~~I~~~~ldG 216 (302)
T 3s25_A 166 NGQLYRYDT-----------------ASQSEALFYDCNC--YKP-VVLDDTNVYYMDVNR---------DNAIVHVNINN 216 (302)
T ss_dssp TCCEEEEET-----------------TTTEEEEEECSCE--EEE-EEEETTEEEEEEGGG---------TTEEEEECSSS
T ss_pred CceEEEEEC-----------------CCCCEEEEeCCCc--cce-eeecCCEEEEEEcCC---------CcEEEEEECCC
Confidence 237999998 7777777765432 335 559999999987653 26899999998
Q ss_pred CCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeE
Q 003363 414 NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWS 493 (826)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~ 493 (826)
+..+.++... .+.|+|+|++||+..... ...|+++++++...++|.... ..
T Consensus 217 ~~~~~Lt~~~------------------------~~~~~~~g~~Iy~~~~~~-~~~i~~~~~DG~~r~~l~~~~----~~ 267 (302)
T 3s25_A 217 PNPVVLTEAN------------------------IEHYNVYGSLIFYQRGGD-NPALCVVKNDGTGFKELAKGE----FC 267 (302)
T ss_dssp CCCEECSCSC------------------------EEEEEEETTEEEEEECSS-SCEEEEEETTSCCCEEEEESC----EE
T ss_pred CCeEEEeCCC------------------------cceEEECCCEEEEEECCC-CcEEEEEECCCCccEEeeCCc----cc
Confidence 8776665322 124789999998875443 478999999998888887653 23
Q ss_pred EEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 494 LLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 494 ~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
.+++.+++|+++...... |+..++.+
T Consensus 268 ~i~i~~d~Iy~td~~~~~---i~~~~~dG 293 (302)
T 3s25_A 268 NINVTSQYVYFTDFVSNK---EYCTSTQN 293 (302)
T ss_dssp EEEECSSEEEEEETTTCC---EEEEESSS
T ss_pred eEEEeCCEEEEEECCCCe---EEEEECCC
Confidence 678899999998754443 77766543
No 226
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.53 E-value=2.3e-13 Score=157.48 Aligned_cols=264 Identities=18% Similarity=0.153 Sum_probs=167.3
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec-CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
..+...+++|||+.|+.....+ .+.+|+ .+...+... .....+ ..++|+|||+.|+....+....
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~-----~i~~w~~~~~~~~~~~---~~~~~v------~~~~~s~~g~~l~~~~~dg~v~ 369 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDK-----TVKLWNRNGQHLQTLT---GHSSSV------WGVAFSPDGQTIASASDDKTVK 369 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEEC---CCSSCE------EEEEECTTSSEEEEEETTSEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCC-----eEEEEeCCCCeeEEEe---CCCCCE------EEEEECCCCCEEEEEeCCCEEE
Confidence 4578899999999999876543 466773 332222221 111222 6899999999999887665432
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccE
Q 003363 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 312 (826)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~ 312 (826)
.|+. ..........+........|++|.....++.....|.+||..+..++.+ ......+..++|+||++.
T Consensus 370 --~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~--~~~~~~v~~~~~s~d~~~---- 440 (577)
T 2ymu_A 370 --LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL--TGHSSSVWGVAFSPDDQT---- 440 (577)
T ss_dssp --EEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEE--ECCSSCEEEEEECTTSSE----
T ss_pred --EEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEe--cCCCCCeEEEEECCCCCE----
Confidence 2221 1111112223344445667888854445555678899999766656666 334456778999999997
Q ss_pred EEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEecc
Q 003363 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 392 (826)
Q Consensus 313 lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~ 392 (826)
|+..+ .+..|..+|+ .+.....+..+...+....|||||++|+..+.+
T Consensus 441 l~~~~---------------~d~~v~~w~~-----------------~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 441 IASAS---------------DDKTVKLWNR-----------------NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp EEEEE---------------TTSEEEEEET-----------------TSCEEEEEECCSSCEEEEEECTTSCEEEEEETT
T ss_pred EEEEc---------------CCCEEEEEEC-----------------CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 77665 2336788887 556667777777788889999999998866644
Q ss_pred CCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEE
Q 003363 393 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 472 (826)
Q Consensus 393 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~ 472 (826)
..|.+||..+ +... . +.. +...+..++|+|||+.|+ +...++. |..
T Consensus 489 -----------~~i~iw~~~~-~~~~---------~-~~~---------h~~~v~~l~~s~dg~~l~-s~~~dg~--v~l 534 (577)
T 2ymu_A 489 -----------KTVKLWNRNG-QLLQ---------T-LTG---------HSSSVRGVAFSPDGQTIA-SASDDKT--VKL 534 (577)
T ss_dssp -----------SEEEEEETTS-CEEE---------E-EEC---------CSSCEEEEEECTTSSCEE-EEETTSE--EEE
T ss_pred -----------CEEEEEcCCC-CEEE---------E-EeC---------CCCCEEEEEEcCCCCEEE-EEECcCE--EEE
Confidence 4588888543 2110 0 000 112345778999999664 4444454 455
Q ss_pred EECCCCcEEEecCCCCCeeeEEEeecCCEEEEEE
Q 003363 473 VNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 506 (826)
Q Consensus 473 vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ 506 (826)
+|..+..+..+......+....|++|++.|+...
T Consensus 535 wd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 535 WNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp ECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred EeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 5765555555655555666678999998776543
No 227
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.53 E-value=3.6e-12 Score=137.09 Aligned_cols=249 Identities=12% Similarity=0.123 Sum_probs=157.4
Q ss_pred ccEEEEeCCCCCeEEEEecCCC---CCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPEN---ESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~---~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~ 230 (826)
....+++||||++|++...... ....++.++ ..++..+.+...... ..+.|||||++|++....
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~v~~~~-- 109 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKP----------FGATINNTTQTLWFGNTV-- 109 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCC----------CSEEEETTTTEEEEEETT--
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCc----------ceEEECCCCCEEEEEecC--
Confidence 3667899999999977654321 133455555 456666666554444 689999999988776432
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCC--------CccceEEE
Q 003363 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS--------LSVGQVVW 302 (826)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~--------~~~~~~~w 302 (826)
...|+++|++++++......... .....++|
T Consensus 110 -----------------------------------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (353)
T 3vgz_A 110 -----------------------------------------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVA 148 (353)
T ss_dssp -----------------------------------------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEE
T ss_pred -----------------------------------------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEE
Confidence 25799999998886443111111 12567899
Q ss_pred eeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCC-CCccccCceecC
Q 003363 303 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSP 381 (826)
Q Consensus 303 SPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~Sp 381 (826)
+|||+. |++.... ....|+.+|+ .+++...... .........|+|
T Consensus 149 s~dg~~----l~~~~~~-------------~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 149 DDATNT----VYISGIG-------------KESVIWVVDG-----------------GNIKLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp ETTTTE----EEEEEES-------------SSCEEEEEET-----------------TTTEEEEEECCCCTTCCCCEEET
T ss_pred CCCCCE----EEEEecC-------------CCceEEEEcC-----------------CCCceEEEecCCCCccceEEECC
Confidence 999997 7666522 2236999998 5555544333 334467889999
Q ss_pred CCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEE
Q 003363 382 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 461 (826)
Q Consensus 382 DG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~ 461 (826)
||++|+..... ..|+++|+.+++... .+.....+. ......+.|+|||+.++++
T Consensus 195 dg~~l~~~~~~-----------~~i~~~d~~~~~~~~----------~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 195 EGKRLYTTNAD-----------GELITIDTADNKILS----------RKKLLDDGK-----EHFFINISLDTARQRAFIT 248 (353)
T ss_dssp TTTEEEEECTT-----------SEEEEEETTTTEEEE----------EEECCCSSS-----CCCEEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----------CeEEEEECCCCeEEE----------EEEcCCCCC-----CcccceEEECCCCCEEEEE
Confidence 99988765432 468999987754321 111100000 0012246899999988766
Q ss_pred EEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 462 SIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 462 ~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
. .....|+.+|+.+++.......... ....++++++.+++..... ..|.+.++.+
T Consensus 249 ~--~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~---~~v~~~d~~~ 303 (353)
T 3vgz_A 249 D--SKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQA---GKVSVIDAKS 303 (353)
T ss_dssp E--SSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTT---TEEEEEETTT
T ss_pred e--CCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCC---CeEEEEECCC
Confidence 4 3445788889988887654433222 3467899999877765433 3577777543
No 228
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.53 E-value=2e-13 Score=151.75 Aligned_cols=290 Identities=10% Similarity=-0.024 Sum_probs=175.2
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecC--CCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 156 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVP--QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~--~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
+...+||| +..+++....+ + .+...+ ..++..+.+... .+..+.+ ..+.|+|||+.++..+.+....
T Consensus 125 ~~~~~~s~-~~~~~~~~~~~-~--~i~~~d~~~g~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~~~s~~~d~~v~ 194 (433)
T 3bws_A 125 PKSVRFID-NTRLAIPLLED-E--GMDVLDINSGQTVRLSPPEKYKKKLGFV------ETISIPEHNELWVSQMQANAVH 194 (433)
T ss_dssp BCCCEESS-SSEEEEEBTTS-S--SEEEEETTTCCEEEECCCHHHHTTCCEE------EEEEEGGGTEEEEEEGGGTEEE
T ss_pred ceEEEEeC-CCeEEEEeCCC-C--eEEEEECCCCeEeeecCcccccccCCce------eEEEEcCCCEEEEEECCCCEEE
Confidence 55789999 55666665432 2 243333 344444433221 1222233 6889999998776665544322
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCc-cCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003363 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGK-RQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~-~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (826)
.|+............+........|.++....+... ....|++||+.+++.... ......+..++|+|||+.
T Consensus 195 --~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~~g~~--- 267 (433)
T 3bws_A 195 --VFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK--TDKIGLPRGLLLSKDGKE--- 267 (433)
T ss_dssp --EEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE--CCCCSEEEEEEECTTSSE---
T ss_pred --EEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE--ecCCCCceEEEEcCCCCE---
Confidence 233221111111222334445667888854443333 567899999998887665 444556788999999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEec
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 391 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~ 391 (826)
|++.+.....- ...+..|+++|+ .+++.............+.|+|||++|++...
T Consensus 268 -l~~~~~~~~~~-------~~~dg~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 322 (433)
T 3bws_A 268 -LYIAQFSASNQ-------ESGGGRLGIYSM-----------------DKEKLIDTIGPPGNKRHIVSGNTENKIYVSDM 322 (433)
T ss_dssp -EEEEEEESCTT-------CSCCEEEEEEET-----------------TTTEEEEEEEEEECEEEEEECSSTTEEEEEET
T ss_pred -EEEEECCCCcc-------ccCCCeEEEEEC-----------------CCCcEEeeccCCCCcceEEECCCCCEEEEEec
Confidence 87766322110 012347999998 55555444444445677899999998877764
Q ss_pred cCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCC-----
Q 003363 392 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS----- 466 (826)
Q Consensus 392 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~----- 466 (826)
.+ ..|++||+.+++... .+.. ...+..++|+|||+.|++.....+
T Consensus 323 ~~----------~~v~v~d~~~~~~~~----------~~~~----------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 372 (433)
T 3bws_A 323 CC----------SKIEVYDLKEKKVQK----------SIPV----------FDKPNTIALSPDGKYLYVSCRGPNHPTEG 372 (433)
T ss_dssp TT----------TEEEEEETTTTEEEE----------EEEC----------SSSEEEEEECTTSSEEEEEECCCCCTTTC
T ss_pred CC----------CEEEEEECCCCcEEE----------EecC----------CCCCCeEEEcCCCCEEEEEecCCCccccc
Confidence 43 579999988654321 1110 012346789999998877665433
Q ss_pred -------eEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 003363 467 -------SQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 520 (826)
Q Consensus 467 -------~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~ 520 (826)
+..|+.+|+.+++...............|+++++.+++..... ..+.+.++
T Consensus 373 ~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d---~~i~v~~~ 430 (433)
T 3bws_A 373 YLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLD---HQIRVYRR 430 (433)
T ss_dssp TTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTT---TEEEEEEE
T ss_pred cccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCC---CeEEEEEe
Confidence 2389999999988777665544556678899998877655422 23555553
No 229
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.53 E-value=8.1e-13 Score=144.68 Aligned_cols=245 Identities=11% Similarity=0.105 Sum_probs=157.1
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003363 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (826)
Q Consensus 102 ~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (826)
..++|||+.++++... ...++++++. .++.......+ ..+...+|||||++|++....+ ..+
T Consensus 37 ~~~s~dg~~l~~~~~~--------d~~i~v~d~~--~~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~~---~~v 98 (391)
T 1l0q_A 37 AVISPDGTKVYVANAH--------SNDVSIIDTA--TNNVIATVPAG-----SSPQGVAVSPDGKQVYVTNMAS---STL 98 (391)
T ss_dssp EEECTTSSEEEEEEGG--------GTEEEEEETT--TTEEEEEEECS-----SSEEEEEECTTSSEEEEEETTT---TEE
T ss_pred EEECCCCCEEEEECCC--------CCeEEEEECC--CCeEEEEEECC-----CCccceEECCCCCEEEEEECCC---CEE
Confidence 3458999988665322 3466776652 22322222222 2578899999999998875432 234
Q ss_pred EEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceee
Q 003363 182 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (826)
Q Consensus 182 ~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (826)
..++ ..++....+...... ..++|+|||++|++....
T Consensus 99 ~v~d~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~~~~~~-------------------------------- 136 (391)
T 1l0q_A 99 SVIDTTSNTVAGTVKTGKSP----------LGLALSPDGKKLYVTNNG-------------------------------- 136 (391)
T ss_dssp EEEETTTTEEEEEEECSSSE----------EEEEECTTSSEEEEEETT--------------------------------
T ss_pred EEEECCCCeEEEEEeCCCCc----------ceEEECCCCCEEEEEeCC--------------------------------
Confidence 4333 345554444433333 689999999999776432
Q ss_pred cCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEE
Q 003363 261 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (826)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (826)
...|++||+.+++.... ......+..++|+|||+. |++.+. ....|+++
T Consensus 137 -----------~~~v~~~d~~~~~~~~~--~~~~~~~~~~~~~~dg~~----l~~~~~--------------~~~~v~~~ 185 (391)
T 1l0q_A 137 -----------DKTVSVINTVTKAVINT--VSVGRSPKGIAVTPDGTK----VYVANF--------------DSMSISVI 185 (391)
T ss_dssp -----------TTEEEEEETTTTEEEEE--EECCSSEEEEEECTTSSE----EEEEET--------------TTTEEEEE
T ss_pred -----------CCEEEEEECCCCcEEEE--EecCCCcceEEECCCCCE----EEEEeC--------------CCCEEEEE
Confidence 36799999998887655 333445678999999997 766542 23479999
Q ss_pred EcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcc
Q 003363 341 RVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSL 420 (826)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~ 420 (826)
|+ .+++...............|+|||++|+..+... ....|++||+.+++....
T Consensus 186 d~-----------------~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~--------~~~~v~~~d~~~~~~~~~- 239 (391)
T 1l0q_A 186 DT-----------------VTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDK--------YFNTVSMIDTGTNKITAR- 239 (391)
T ss_dssp ET-----------------TTTEEEEEEECSSEEEEEEECTTSSEEEEEEECS--------SCCEEEEEETTTTEEEEE-
T ss_pred EC-----------------CCCeEEEEEecCCCccceEECCCCCEEEEEecCc--------CCCcEEEEECCCCeEEEE-
Confidence 98 5555544444445567789999999988777531 235799999877543211
Q ss_pred cceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec
Q 003363 421 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 484 (826)
Q Consensus 421 ~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt 484 (826)
+... ..+..+.|+|||+.|+++...+ ..+..+|+.+++.....
T Consensus 240 ---------~~~~----------~~~~~~~~s~dg~~l~~s~~~d--~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 240 ---------IPVG----------PDPAGIAVTPDGKKVYVALSFX--NTVSVIDTATNTITATM 282 (391)
T ss_dssp ---------EECC----------SSEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEE
T ss_pred ---------EecC----------CCccEEEEccCCCEEEEEcCCC--CEEEEEECCCCcEEEEE
Confidence 1100 0123568999999887765433 45777799888876543
No 230
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.52 E-value=2.6e-13 Score=161.56 Aligned_cols=255 Identities=13% Similarity=0.122 Sum_probs=160.0
Q ss_pred eCCCCCeEEEEecCCCCCC-eEEEEec---CCc---eeEEEecCCC--ccccccCCCcccceeec-CCCCeEEEEeecCC
Q 003363 161 PSPSGSKLLVVRNPENESP-IQFELWS---QSQ---LEKEFHVPQT--VHGSVYADGWFEGISWN-SDETLIAYVAEEPS 230 (826)
Q Consensus 161 ~SPdG~~la~~~~~~~~~~-~~~~i~~---~~~---~~~~~~~~~~--~~g~v~~~~~~~~~~wS-PDg~~ia~~~~~~~ 230 (826)
+.|+|.+++|.+..+++.. .++.... .+. .+.+++.... .|+. -....++|| |||++|||+....
T Consensus 122 p~~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~----~~~~~~~~S~PDG~~lAy~~~~~- 196 (751)
T 2xe4_A 122 PYVYGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAF----CDVMEVKPAPPEHDLVAFSVDMS- 196 (751)
T ss_dssp CEEETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSC----CEEEEEEECTTTTCEEEEEEESS-
T ss_pred CeEECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCe----EEEeeeEecCCCCCEEEEEEeCC-
Confidence 3479999999988764433 3444443 343 3444443211 1110 023689999 9999999987653
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCC-ceEeccCCCCCCccceEEEeeCCCCC
Q 003363 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-EVQAVKGIPKSLSVGQVVWAPLNEGL 309 (826)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g-~~~~l~~~~~~~~~~~~~wSPDg~~~ 309 (826)
| .....||++|+++| +. +. ..-......++|||||+.
T Consensus 197 ---------------------------------G-----~~~~~l~v~dl~~g~~~--l~-~~~~~~~~~~~WspDg~~- 234 (751)
T 2xe4_A 197 ---------------------------------G-----NEVYTIEFKRISDPSQT--IA-DKVSGTNGEIVWGPDHTS- 234 (751)
T ss_dssp ---------------------------------S-----SSCEEEEEEETTCTTCC--CC-CCEEEECSCCEECSSTTE-
T ss_pred ---------------------------------C-----CceEEEEEEECCCCCEe--CC-ccccCceeeEEEecCCCE-
Confidence 1 12357999999998 62 21 000112457899999999
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc--eecCC--CCccccCceecCCCCE
Q 003363 310 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VNLTE--SISSAFFPRFSPDGKF 385 (826)
Q Consensus 310 ~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~Lt~--~~~~~~~p~~SpDG~~ 385 (826)
|+|+..... .++..||++++ .+++. +.+.. .......+.|||||++
T Consensus 235 ---l~y~~~d~~----------~~~~~v~~~~l-----------------gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~ 284 (751)
T 2xe4_A 235 ---LFYVTKDET----------LRENKVWRHVM-----------------GKLQSEDVCLYEEHNPLFSAFMYKAADTNT 284 (751)
T ss_dssp ---EEEEEECTT----------CCEEEEEEEET-----------------TSCGGGCEEEEECCCTTCEEEEEECTTSSE
T ss_pred ---EEEEEECCC----------CCCCEEEEEEC-----------------CCCchhcEEEEecCCCceEEEEEECCCCCE
Confidence 999874321 13348999998 44432 23322 2234567899999999
Q ss_pred EEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccC---CCEEEEEE
Q 003363 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD---GCTMLLSS 462 (826)
Q Consensus 386 l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~D---g~~l~~~~ 462 (826)
|+|.+... ...+||++|+.++.... .+..+... .....|++| |+.|+|.+
T Consensus 285 l~~~~~~~--------~~~~l~~~d~~~~~~~~------~~~~l~~~-------------~~~~~~s~~~~~g~~l~~~t 337 (751)
T 2xe4_A 285 LCIGSQSP--------ETAEVHLLDLRKGNAHN------TLEIVRPR-------------EKGVRYDVQMHGTSHLVILT 337 (751)
T ss_dssp EEEEEECS--------SCEEEEEEESSSCTTCC------CEEESSCC-------------CTTCCEEEEEETTTEEEEEE
T ss_pred EEEEecCC--------CCceEEEEECCCCCCCc------eeEEeecC-------------CCCceEEEeeeeCCEEEEEe
Confidence 99998653 35789999998752110 00111100 113346666 88899988
Q ss_pred EeC--CeEEEEEEECCC-CcEEE-ecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 003363 463 IWG--SSQVIISVNVSS-GELLR-ITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 520 (826)
Q Consensus 463 ~~~--~~~~l~~vdl~t-g~~~~-lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~ 520 (826)
... +..+|+.+|+++ ++.+. +...........++++++.|++.... ....+|+++++
T Consensus 338 ~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~-~g~~~l~~~dl 398 (751)
T 2xe4_A 338 NEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRR-AGLTRIWTMMA 398 (751)
T ss_dssp CTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEE-TTEEEEEEEEC
T ss_pred CCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEe-CCEEEEEEEec
Confidence 765 677999999986 45555 55554444555677788888777654 34567888885
No 231
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.52 E-value=2.2e-14 Score=149.29 Aligned_cols=213 Identities=15% Similarity=0.163 Sum_probs=124.3
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (826)
.|.||++||.+.+ ...|...+..|+ .+|.|+++|+|| +|.+.. + .....++++.+.+..+++. ++.+
T Consensus 27 ~p~vvllHG~~~~--~~~w~~~~~~L~-~~~rvia~DlrG---hG~S~~---~--~~~~~~~~~a~dl~~ll~~--l~~~ 93 (276)
T 2wj6_A 27 GPAILLLPGWCHD--HRVYKYLIQELD-ADFRVIVPNWRG---HGLSPS---E--VPDFGYQEQVKDALEILDQ--LGVE 93 (276)
T ss_dssp SCEEEEECCTTCC--GGGGHHHHHHHT-TTSCEEEECCTT---CSSSCC---C--CCCCCHHHHHHHHHHHHHH--HTCC
T ss_pred CCeEEEECCCCCc--HHHHHHHHHHHh-cCCEEEEeCCCC---CCCCCC---C--CCCCCHHHHHHHHHHHHHH--hCCC
Confidence 4789999997654 567888888886 479999999999 444421 1 1123455555555555554 3457
Q ss_pred cEEEEEecchHHHHHHHHHhC-CCceeEEEecCCccch-----h-hhccCCCCCCchh-----hhhccCcC---------
Q 003363 672 KVTVVGGSHGGFLTTHLIGQA-PDKFVAAAARNPLCNL-----A-LMVGTTDIPDWCY-----VESYGSKG--------- 730 (826)
Q Consensus 672 rv~l~G~S~GG~~a~~~a~~~-p~~~~a~v~~~p~~~~-----~-~~~~~~~~~~~~~-----~~~~~~~~--------- 730 (826)
++.|+||||||.+++.++.++ |++++++|+.++.... . .+........|.. ...+....
T Consensus 94 ~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (276)
T 2wj6_A 94 TFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSLTLLKDPERWREGTHGLFDVWLDGHDEKRVRHHL 173 (276)
T ss_dssp SEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESCCCSSCCHHHHHHHHHHHCTTTHHHHHHHHHHHHHTTBCCHHHHHHH
T ss_pred ceEEEEECHHHHHHHHHHHHhCHHhhceEEEecccccCCCchHHHHhhhccCcchHHHHHHHHHHHhhcccchHHHHHHH
Confidence 899999999999999999999 9999999998753210 0 0000000011100 00000000
Q ss_pred CccCCCCCChhhH----H----HHh-hcCcccccCCCCCcEEEEEeCCCCCCC-c-HHHHHHHHHHHhCCCCEEEEEeCC
Q 003363 731 KDSFTESPSVEDL----T----RFH-SKSPISHISKVKTPTIFLLGAQDLRVP-V-SNGLQYARALREKGVETKVIVFPN 799 (826)
Q Consensus 731 ~~~~~~~~~~~~~----~----~~~-~~sp~~~~~~i~~PvLii~G~~D~~vp-~-~~~~~~~~~l~~~g~~~~~~~~p~ 799 (826)
...... ...+.. . .+. ..++...+.++++|+|+++|..|...+ + .....+.+.+ ...+++++|+
T Consensus 174 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lv~~~~~~~~~~~~~~~~~~~~~~~----p~a~~~~i~~ 248 (276)
T 2wj6_A 174 LEEMAD-YGYDCWGRSGRVIEDAYGRNGSPMQMMANLTKTRPIRHIFSQPTEPEYEKINSDFAEQH----PWFSYAKLGG 248 (276)
T ss_dssp HTTTTT-CCHHHHHHHHHHHHHHHHHHCCHHHHHHTCSSCCCEEEEECCSCSHHHHHHHHHHHHHC----TTEEEEECCC
T ss_pred HHHhhh-cchhhhhhccchhHHHHhhccchhhHHhhcCCCceEEEEecCccchhHHHHHHHHHhhC----CCeEEEEeCC
Confidence 000000 000000 0 000 012234567789999999875443332 1 2223333333 3589999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHH
Q 003363 800 DVHGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 800 ~~H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
+||....++ ..++...+.+||.+
T Consensus 249 ~gH~~~~e~-P~~~~~~i~~Fl~~ 271 (276)
T 2wj6_A 249 PTHFPAIDV-PDRAAVHIREFATA 271 (276)
T ss_dssp SSSCHHHHS-HHHHHHHHHHHHHH
T ss_pred CCCcccccC-HHHHHHHHHHHHhh
Confidence 999765443 45788899999975
No 232
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.52 E-value=2.2e-12 Score=138.02 Aligned_cols=259 Identities=10% Similarity=0.031 Sum_probs=146.7
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (826)
++|||+.+++.... ...+.+++++..++....+...+.. ......+|||||++|++....+ +.-.+|.
T Consensus 45 ~spdg~~l~~~~~~--------~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~-~~i~~~d 112 (343)
T 1ri6_A 45 VSPDKRYLYVGVRP--------EFRVLAYRIAPDDGALTFAAESALP---GSLTHISTDHQGQFVFVGSYNA-GNVSVTR 112 (343)
T ss_dssp ECTTSSEEEEEETT--------TTEEEEEEECTTTCCEEEEEEEECS---SCCSEEEECTTSSEEEEEETTT-TEEEEEE
T ss_pred ECCCCCEEEEeecC--------CCeEEEEEecCCCCceeeccccccC---CCCcEEEEcCCCCEEEEEecCC-CeEEEEE
Confidence 48999988665322 1355666664333333333211111 2467889999999998776532 3223333
Q ss_pred EecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCC
Q 003363 184 LWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDW 263 (826)
Q Consensus 184 i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 263 (826)
+. .+...+....... +.. ...+.|||||+.|+....
T Consensus 113 ~~-~~~~~~~~~~~~~-~~~------~~~~~~s~dg~~l~~~~~------------------------------------ 148 (343)
T 1ri6_A 113 LE-DGLPVGVVDVVEG-LDG------CHSANISPDNRTLWVPAL------------------------------------ 148 (343)
T ss_dssp EE-TTEEEEEEEEECC-CTT------BCCCEECTTSSEEEEEEG------------------------------------
T ss_pred CC-CCccccccccccC-CCC------ceEEEECCCCCEEEEecC------------------------------------
Confidence 32 3322222221111 111 268899999998876532
Q ss_pred CccCCCccCceEEEEEccC-CceEecc----CCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceE
Q 003363 264 GETYAGKRQPSLFVININS-GEVQAVK----GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 338 (826)
Q Consensus 264 g~~~~~~~~~~l~v~d~~~-g~~~~l~----~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~ 338 (826)
....|++||+.+ +++..+. .......+..++|+|||+. |+++.. ....|+
T Consensus 149 -------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~----l~~~~~--------------~~~~i~ 203 (343)
T 1ri6_A 149 -------KQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY----AYCVNE--------------LNSSVD 203 (343)
T ss_dssp -------GGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE----EEEEET--------------TTTEEE
T ss_pred -------CCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE----EEEEeC--------------CCCEEE
Confidence 125799999987 7664321 0222335567899999997 766652 223677
Q ss_pred EEEcccccchhhhhhhhcCCCCCCcce---e---cCCC---CccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEE
Q 003363 339 AVRVSLYKSEASELELKESSSEDLPVV---N---LTES---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 409 (826)
Q Consensus 339 ~~d~~~~~~~~~~~~~~~~~~~~~~~~---~---Lt~~---~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~ 409 (826)
+++++. .+++.. . +... ......+.|+|||++|+..... ...|.+|
T Consensus 204 ~~~~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~----------~~~i~v~ 258 (343)
T 1ri6_A 204 VWELKD---------------PHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT----------ASLITVF 258 (343)
T ss_dssp EEESSC---------------TTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT----------TTEEEEE
T ss_pred EEEecC---------------CCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC----------CCEEEEE
Confidence 777631 223221 1 1111 1223468999999988655432 2568888
Q ss_pred eCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec
Q 003363 410 DWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 484 (826)
Q Consensus 410 d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt 484 (826)
|+...... ...+..+.. . ..+..++|+|||+.|++.....+...+|.+|..+|+.+++.
T Consensus 259 d~~~~~~~------~~~~~~~~~--~--------~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 259 SVSEDGSV------LSKEGFQPT--E--------TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp EECTTSCC------EEEEEEEEC--S--------SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred EEcCCCCc------eEEeeeecC--C--------CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 87632110 001111111 0 12447789999998877665567888999999888876653
No 233
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.52 E-value=2.7e-15 Score=168.07 Aligned_cols=224 Identities=15% Similarity=0.151 Sum_probs=141.6
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cchHHHHHHHHCC-cEEEEECCC-CCCCCchhhhhcCCCCCCcchH
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVG-YSLLIVNYR-GSLGFGEEALQSLPGKVGSQDV 652 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~~~~~~~~la~~G-~~Vl~~d~r-G~~g~G~~~~~~~~~~~~~~~~ 652 (826)
+...+|.|.. ..++.|+||++|||++..... ........|+++| ++|+.+||| |..|++...... ....+...+
T Consensus 83 L~l~v~~P~~--~~~~~PviV~iHGGg~~~g~~~~~~~~~~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~-~~~~~n~gl 159 (489)
T 1qe3_A 83 LYVNVFAPDT--PSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFD-EAYSDNLGL 159 (489)
T ss_dssp CEEEEEEECS--SCCSEEEEEEECCSTTTSCCTTSGGGCCHHHHHHHTCEEEEECCCCHHHHSCCCTTTC-TTSCSCHHH
T ss_pred CEEEEEeCCC--CCCCCCEEEEECCCccccCCCCCcccCHHHHHhcCCEEEEecCccCcccccCcccccc-ccCCCCcch
Confidence 4556788874 234589999999988654332 2222355666665 999999999 333343321100 112334458
Q ss_pred HHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHhC--CCceeEEEecCCccchhhhccCCCCCCchhhhhcc
Q 003363 653 NDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYG 727 (826)
Q Consensus 653 ~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~ 727 (826)
.|+.++++|+.++. .+|++||+|+|+|+||++++.++... +++|+++|+.+|..++......... ...+....+
T Consensus 160 ~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~-~~~~~~~~g 238 (489)
T 1qe3_A 160 LDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAAST-AAAFLQVLG 238 (489)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHHH-HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHHH-HHHHHHHcC
Confidence 89999999998862 36999999999999999998887653 5789999999997633211100000 001112222
Q ss_pred Cc--CCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCC
Q 003363 728 SK--GKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIE 805 (826)
Q Consensus 728 ~~--~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~ 805 (826)
.. ...++...+..+ .+...+++........|.+++++..|..+.+++..+++++.+..++++.+-..++++|.+.
T Consensus 239 ~~~~~~~~Lr~~~~~~---l~~~~~~~~~~~~~~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~~vp~~~g~~~~Eg~~~~ 315 (489)
T 1qe3_A 239 INESQLDRLHTVAAED---LLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKSIAEGAASGIPLLIGTTRDEGYLFF 315 (489)
T ss_dssp CCTTCGGGGGTSCHHH---HHHHHHHHHTSTTCCTTSCSSCCBCBTTTBCSCHHHHHHTTTTTTCCEEEEEETTGGGGTC
T ss_pred CCHHHHHHHHcCCHHH---HHHHHHHhhhccccccCCccceEeECCeecCcCHHHHHhcCCCCCCCEEEeeecchhHhhc
Confidence 21 122222222111 1111122221123345678889999999999999999988888899999999999999876
Q ss_pred C
Q 003363 806 R 806 (826)
Q Consensus 806 ~ 806 (826)
.
T Consensus 316 ~ 316 (489)
T 1qe3_A 316 T 316 (489)
T ss_dssp C
T ss_pred c
Confidence 4
No 234
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.52 E-value=1.6e-14 Score=150.74 Aligned_cols=213 Identities=11% Similarity=0.028 Sum_probs=119.2
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
..|.||++||.+.. ...|...+..|++ ||.|+++|+|| +|.+... .....++++.+.+..+++.- .+.
T Consensus 50 ~~~~lvllHG~~~~--~~~~~~l~~~L~~-~~~v~~~D~~G---~G~S~~~-----~~~~~~~~~a~~~~~~l~~~-~~~ 117 (280)
T 3qmv_A 50 APLRLVCFPYAGGT--VSAFRGWQERLGD-EVAVVPVQLPG---RGLRLRE-----RPYDTMEPLAEAVADALEEH-RLT 117 (280)
T ss_dssp CSEEEEEECCTTCC--GGGGTTHHHHHCT-TEEEEECCCTT---SGGGTTS-----CCCCSHHHHHHHHHHHHHHT-TCS
T ss_pred CCceEEEECCCCCC--hHHHHHHHHhcCC-CceEEEEeCCC---CCCCCCC-----CCCCCHHHHHHHHHHHHHHh-CCC
Confidence 34889999997655 5567778888876 99999999999 5554321 12234555555544444432 145
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCcee----EEEecCCccchhhhcc-CCCCCCchh---hhhccCcCCc-----cCCCC
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDKFV----AAAARNPLCNLALMVG-TTDIPDWCY---VESYGSKGKD-----SFTES 737 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~~~----a~v~~~p~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~-----~~~~~ 737 (826)
+++.|+|||+||.+++.+|.++|+++. .+++.+.......... ......-.+ ...++..... .+...
T Consensus 118 ~~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (280)
T 3qmv_A 118 HDYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDR 197 (280)
T ss_dssp SSEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCT
T ss_pred CCEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHH
Confidence 789999999999999999999887665 5555443221100000 000000000 0000000000 00000
Q ss_pred CCh---hhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCC-CCCHHHH
Q 003363 738 PSV---EDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIER-PQSDFES 813 (826)
Q Consensus 738 ~~~---~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~-~~~~~~~ 813 (826)
... ..........+ ..+.++++|+|+++|++|..++++.+..+.+.+. ...+++++++ ||.... .+...++
T Consensus 198 ~~~~~~~~~~~~~~~~~-~~~~~i~~P~l~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~~~g-gH~~~~~~~~~~~~ 272 (280)
T 3qmv_A 198 RLPVLRADLRACERYDW-HPRPPLDCPTTAFSAAADPIATPEMVEAWRPYTT---GSFLRRHLPG-NHFFLNGGPSRDRL 272 (280)
T ss_dssp THHHHHHHHHHHHTCCC-CCCCCBCSCEEEEEEEECSSSCHHHHHTTGGGBS---SCEEEEEEEE-ETTGGGSSHHHHHH
T ss_pred HHHHHHHHHHHHHhccc-cCCCceecCeEEEEecCCCCcChHHHHHHHHhcC---CceEEEEecC-CCeEEcCchhHHHH
Confidence 000 01111111111 2246789999999999999999888776655543 2467888875 887654 2333334
Q ss_pred HHHHHHH
Q 003363 814 FLNIGLW 820 (826)
Q Consensus 814 ~~~i~~w 820 (826)
.+.|.+|
T Consensus 273 ~~~i~~~ 279 (280)
T 3qmv_A 273 LAHLGTE 279 (280)
T ss_dssp HHHHHTT
T ss_pred HHHHHhh
Confidence 4444433
No 235
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.51 E-value=8.2e-13 Score=140.87 Aligned_cols=275 Identities=13% Similarity=0.065 Sum_probs=169.8
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (826)
++|||+.++... ...+.++++..........+.. .......+...+|+|||+.|+.....+ .+.
T Consensus 59 ~~~~~~~l~~~~----------dg~i~iw~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~ 122 (337)
T 1gxr_A 59 ISNPTRHVYTGG----------KGCVKVWDISHPGNKSPVSQLD-CLNRDNYIRSCKLLPDGCTLIVGGEAS-----TLS 122 (337)
T ss_dssp ECSSSSEEEEEC----------BSEEEEEETTSTTCCSCSEEEE-CSCTTSBEEEEEECTTSSEEEEEESSS-----EEE
T ss_pred EecCCcEEEEcC----------CCeEEEEECCCCCceeeeeccc-ccCCCCcEEEEEEcCCCCEEEEEcCCC-----cEE
Confidence 479998887642 2456666664432211111111 000114588999999999999876543 455
Q ss_pred Eec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeec
Q 003363 184 LWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 261 (826)
Q Consensus 184 i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (826)
+|+ .++........ ...+.+ ..+.|+||++.|+..+.+.... .|+............+........|.+
T Consensus 123 ~~d~~~~~~~~~~~~~-~~~~~i------~~~~~~~~~~~l~~~~~dg~v~--~~d~~~~~~~~~~~~~~~~i~~~~~~~ 193 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELT-SSAPAC------YALAISPDSKVCFSCCSDGNIA--VWDLHNQTLVRQFQGHTDGASCIDISN 193 (337)
T ss_dssp EEECCCC--EEEEEEE-CSSSCE------EEEEECTTSSEEEEEETTSCEE--EEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EEECCCCCcceeeecc-cCCCce------EEEEECCCCCEEEEEeCCCcEE--EEeCCCCceeeeeecccCceEEEEECC
Confidence 662 33322222221 111222 7899999999999887765432 233222211122223344445667888
Q ss_pred CCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEE
Q 003363 262 DWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVR 341 (826)
Q Consensus 262 d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d 341 (826)
+....+++.....|++||+.+++.... ......+..++|+|||+. |+..+ ....|+.+|
T Consensus 194 ~~~~l~~~~~dg~i~~~d~~~~~~~~~--~~~~~~v~~~~~s~~~~~----l~~~~---------------~~~~i~~~~ 252 (337)
T 1gxr_A 194 DGTKLWTGGLDNTVRSWDLREGRQLQQ--HDFTSQIFSLGYCPTGEW----LAVGM---------------ESSNVEVLH 252 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEE
T ss_pred CCCEEEEEecCCcEEEEECCCCceEee--ecCCCceEEEEECCCCCE----EEEEc---------------CCCcEEEEE
Confidence 754555666678999999998876655 334456778999999997 77665 234788999
Q ss_pred cccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCccc
Q 003363 342 VSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE 421 (826)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~ 421 (826)
+ .+++...+..+...+....|+|||++|+..+.+ ..|++||+.+++......
T Consensus 253 ~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------g~i~~~~~~~~~~~~~~~ 304 (337)
T 1gxr_A 253 V-----------------NKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD-----------NLLNAWRTPYGASIFQSK 304 (337)
T ss_dssp T-----------------TSSCEEEECCCSSCEEEEEECTTSSEEEEEETT-----------SEEEEEETTTCCEEEEEE
T ss_pred C-----------------CCCCeEEEcCCccceeEEEECCCCCEEEEecCC-----------CcEEEEECCCCeEEEEec
Confidence 8 566667777777788899999999988766643 468999988765421100
Q ss_pred ceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003363 422 KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (826)
Q Consensus 422 ~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~v 473 (826)
....+..+.|+|||+.|+ +...++...+|.+
T Consensus 305 --------------------~~~~v~~~~~s~~~~~l~-~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 305 --------------------ESSSVLSCDISVDDKYIV-TGSGDKKATVYEV 335 (337)
T ss_dssp --------------------CSSCEEEEEECTTSCEEE-EEETTSCEEEEEE
T ss_pred --------------------CCCcEEEEEECCCCCEEE-EecCCCeEEEEEE
Confidence 011334678999998664 4455666666654
No 236
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.51 E-value=1.1e-12 Score=142.35 Aligned_cols=253 Identities=15% Similarity=0.130 Sum_probs=147.9
Q ss_pred CCcceEEEEEe--echhhcccceeEEEEEEeecCCCCccceeecCCc---ceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003363 106 GNGTQAMFSIS--QPNLLANKRKKFMLSTVISKENENSVTFQWAPFP---VEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (826)
Q Consensus 106 ~dg~~v~~~~~--~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~---~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (826)
+++..++.... ...+..+.....+.++.+.........+....+- .....+...+|||||++||..+... ..
T Consensus 81 ~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~---d~ 157 (365)
T 4h5i_A 81 ASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKV---PA 157 (365)
T ss_dssp EETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCS---SC
T ss_pred eCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCC---CC
Confidence 45554443322 2234555556667777665544332222211110 0002356789999999998876432 23
Q ss_pred EEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcce
Q 003363 181 QFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 258 (826)
Q Consensus 181 ~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (826)
.+.+|+ .++....... ++.| ..++|||||+.|+..+.
T Consensus 158 ~i~iwd~~~~~~~~~~~~----~~~V------~~v~fspdg~~l~s~s~------------------------------- 196 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIET----RGEV------KDLHFSTDGKVVAYITG------------------------------- 196 (365)
T ss_dssp EEEEEETTTTEEEEEEEC----SSCC------CEEEECTTSSEEEEECS-------------------------------
T ss_pred EEEEeECCCCcEEEEeCC----CCce------EEEEEccCCceEEeccc-------------------------------
Confidence 677884 3333333322 2333 79999999999998743
Q ss_pred eecCCCccCCCccCceEEEEEccCCceEe-ccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCce
Q 003363 259 WEEDWGETYAGKRQPSLFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 337 (826)
Q Consensus 259 ~~~d~g~~~~~~~~~~l~v~d~~~g~~~~-l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l 337 (826)
..+.+|+..+++... .........+..++|+|||+. ++..+..... ...+
T Consensus 197 --------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~----l~~~s~d~~~-----------~~~i 247 (365)
T 4h5i_A 197 --------------SSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTV----LIAASLKKGK-----------GIVL 247 (365)
T ss_dssp --------------SCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEE----EEEEEESSSC-----------CEEE
T ss_pred --------------eeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCE----EEEEecCCcc-----------eeEE
Confidence 246677776665432 211233446778999999998 8777633221 1245
Q ss_pred EEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCC
Q 003363 338 YAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF 417 (826)
Q Consensus 338 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~ 417 (826)
+.+++.... ........+..+...+...+|||||++||..+.+ ..|.+||+.+++..
T Consensus 248 ~~~~~~~~~------------~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D-----------~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 248 TKISIKSGN------------TSVLRSKQVTNRFKGITSMDVDMKGELAVLASND-----------NSIALVKLKDLSMS 304 (365)
T ss_dssp EEEEEETTE------------EEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT-----------SCEEEEETTTTEEE
T ss_pred eecccccce------------ecceeeeeecCCCCCeEeEEECCCCCceEEEcCC-----------CEEEEEECCCCcEE
Confidence 666652100 0001123455666678889999999999877765 35899998875542
Q ss_pred Cc-ccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEE
Q 003363 418 SS-LEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 474 (826)
Q Consensus 418 ~~-~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vd 474 (826)
.. ..+ +...+..++|||||++| ++.+.++..+||.+.
T Consensus 305 ~~~~~g-------------------H~~~V~~v~fSpdg~~l-aS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 305 KIFKQA-------------------HSFAITEVTISPDSTYV-ASVSAANTIHIIKLP 342 (365)
T ss_dssp EEETTS-------------------SSSCEEEEEECTTSCEE-EEEETTSEEEEEECC
T ss_pred EEecCc-------------------ccCCEEEEEECCCCCEE-EEEeCCCeEEEEEcC
Confidence 11 111 12245578999999855 566667777777664
No 237
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.50 E-value=1e-12 Score=145.07 Aligned_cols=265 Identities=12% Similarity=0.083 Sum_probs=161.5
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
..+...+|||||++|+.....+ .+.+| ..+.....+. ...+.| ..+.|+|||+.|+..+.+....
T Consensus 109 ~~v~~~~~s~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~---~~~~~v------~~~~~~~~~~~l~~~~~d~~i~ 174 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSIVTGVENG-----ELRLWNKTGALLNVLN---FHRAPI------VSVKWNKDGTHIISMDVENVTI 174 (425)
T ss_dssp BCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEEC---CCCSCE------EEEEECTTSSEEEEEETTCCEE
T ss_pred CceEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCeeeecc---CCCccE------EEEEECCCCCEEEEEecCCeEE
Confidence 3688999999999999876543 35566 3343333332 122222 7899999999999887765432
Q ss_pred CCCccCCCCCCCCCCccCC---------------CCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCcc
Q 003363 233 KPTFSLGSTKGGSSDKDCN---------------SWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSV 297 (826)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~ 297 (826)
.|+.............. .......|.++ +..+++.....|++||+.+++..... ......+
T Consensus 175 --iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~-~~~~~~i 250 (425)
T 1r5m_A 175 --LWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKL-IGHHGPI 250 (425)
T ss_dssp --EEETTTTEEEEEECCC---------------CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEE-CCCSSCE
T ss_pred --EEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeee-ccCCCce
Confidence 22211111100001111 11445567766 56666667889999999987654331 2334567
Q ss_pred ceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCC-cceecCCCCccccC
Q 003363 298 GQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNLTESISSAFF 376 (826)
Q Consensus 298 ~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~Lt~~~~~~~~ 376 (826)
..++|+||++. |+..+ .+..|+++|+ ..+ ....+..+...+..
T Consensus 251 ~~~~~~~~~~~----l~~~~---------------~d~~i~i~d~-----------------~~~~~~~~~~~~~~~i~~ 294 (425)
T 1r5m_A 251 SVLEFNDTNKL----LLSAS---------------DDGTLRIWHG-----------------GNGNSQNCFYGHSQSIVS 294 (425)
T ss_dssp EEEEEETTTTE----EEEEE---------------TTSCEEEECS-----------------SSBSCSEEECCCSSCEEE
T ss_pred EEEEECCCCCE----EEEEc---------------CCCEEEEEEC-----------------CCCccceEecCCCccEEE
Confidence 88999999997 77665 3347888887 333 34555556677889
Q ss_pred ceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCC
Q 003363 377 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 456 (826)
Q Consensus 377 p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~ 456 (826)
..|+||| .|+..+.+ ..|++||+.++..... ... ....+..+.|+|||+
T Consensus 295 ~~~~~~~-~l~~~~~d-----------~~i~i~d~~~~~~~~~----------~~~---------~~~~i~~~~~s~~~~ 343 (425)
T 1r5m_A 295 ASWVGDD-KVISCSMD-----------GSVRLWSLKQNTLLAL----------SIV---------DGVPIFAGRISQDGQ 343 (425)
T ss_dssp EEEETTT-EEEEEETT-----------SEEEEEETTTTEEEEE----------EEC---------TTCCEEEEEECTTSS
T ss_pred EEECCCC-EEEEEeCC-----------CcEEEEECCCCcEeEe----------ccc---------CCccEEEEEEcCCCC
Confidence 9999999 55555433 4699999877543211 100 011334678999998
Q ss_pred EEEEEEEeCCeEEEEEEECCCCc---------------------EEEecCCCC--CeeeEEEeecCCEEEEEE
Q 003363 457 TMLLSSIWGSSQVIISVNVSSGE---------------------LLRITPAES--NFSWSLLTLDGDNIIAVS 506 (826)
Q Consensus 457 ~l~~~~~~~~~~~l~~vdl~tg~---------------------~~~lt~~~~--~~~~~~~s~dg~~l~~~~ 506 (826)
.|+.. ..++. |..+|+.+++ +..+..... .+....|+++++.|+...
T Consensus 344 ~l~~~-~~dg~--i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 413 (425)
T 1r5m_A 344 KYAVA-FMDGQ--VNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY 413 (425)
T ss_dssp EEEEE-ETTSC--EEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE
T ss_pred EEEEE-ECCCe--EEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe
Confidence 66544 44444 5555666655 333433322 566677888888665544
No 238
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.50 E-value=1.1e-11 Score=134.28 Aligned_cols=270 Identities=13% Similarity=0.067 Sum_probs=150.0
Q ss_pred eeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCC--CCCeEEEEec-CCceeEEEecCCCccc
Q 003363 126 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPEN--ESPIQFELWS-QSQLEKEFHVPQTVHG 202 (826)
Q Consensus 126 ~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~--~~~~~~~i~~-~~~~~~~~~~~~~~~g 202 (826)
...++++.++...++..+++.. ........+|||||++|++....++ +.-.+|.+.. ++..+.+........
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~----~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~- 100 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDA----EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA- 100 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEE----ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSS-
T ss_pred CCCEEEEEEeCCCCCEEEeecc----cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCC-
Confidence 3466677676655555444332 1245677899999999988876522 3334455553 366665554331110
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccC
Q 003363 203 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 282 (826)
Q Consensus 203 ~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~ 282 (826)
....+++ ||+.|+..... ...|.+|++..
T Consensus 101 ------~p~~~~~--dg~~l~~~~~~-------------------------------------------~~~v~~~~~~~ 129 (361)
T 3scy_A 101 ------DPCYLTT--NGKNIVTANYS-------------------------------------------GGSITVFPIGQ 129 (361)
T ss_dssp ------CEEEEEE--CSSEEEEEETT-------------------------------------------TTEEEEEEBCT
T ss_pred ------CcEEEEE--CCCEEEEEECC-------------------------------------------CCEEEEEEeCC
Confidence 0024445 99887765321 25677777753
Q ss_pred -CceEecc---CCCC---------CCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchh
Q 003363 283 -GEVQAVK---GIPK---------SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 349 (826)
Q Consensus 283 -g~~~~l~---~~~~---------~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 349 (826)
+.+..+. ...+ ...+..++|+|||+. |++... ....|++++++.
T Consensus 130 ~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~----l~~~~~--------------~~~~v~v~~~~~----- 186 (361)
T 3scy_A 130 DGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY----LLADDL--------------GTDQIHKFNINP----- 186 (361)
T ss_dssp TSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE----EEEEET--------------TTTEEEEEEECT-----
T ss_pred CCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE----EEEEeC--------------CCCEEEEEEEcC-----
Confidence 3322220 0000 112356899999997 776652 122566666521
Q ss_pred hhhhhhcCCCCCC----c-c-------eecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCC
Q 003363 350 SELELKESSSEDL----P-V-------VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF 417 (826)
Q Consensus 350 ~~~~~~~~~~~~~----~-~-------~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~ 417 (826)
.++ + . ............+.|||||++|+...... ..|.+||+.++...
T Consensus 187 ----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~----------~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 187 ----------NANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG----------GTVIAFRYADGMLD 246 (361)
T ss_dssp ----------TCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT----------CEEEEEEEETTEEE
T ss_pred ----------CCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC----------CeEEEEEecCCceE
Confidence 222 1 1 11122233456789999999877665332 46888887754321
Q ss_pred CcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEe-CCeEEEEEEECCCCcEEEecC--CCCCeeeEE
Q 003363 418 SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW-GSSQVIISVNVSSGELLRITP--AESNFSWSL 494 (826)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~-~~~~~l~~vdl~tg~~~~lt~--~~~~~~~~~ 494 (826)
. +..+...+. .+. ....++|+|||++||++... .+...+|.++..+|+.+.+.. .........
T Consensus 247 ~-------~~~~~~~~~--~~~-----~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~ 312 (361)
T 3scy_A 247 E-------IQTVAADTV--NAQ-----GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFI 312 (361)
T ss_dssp E-------EEEEESCSS--CCC-----CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEE
T ss_pred E-------eEEEecCCC--CCC-----CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEE
Confidence 1 111111110 010 12367899999988776555 566778888777887665432 112234467
Q ss_pred EeecCCEEEEEEeC
Q 003363 495 LTLDGDNIIAVSSS 508 (826)
Q Consensus 495 ~s~dg~~l~~~~s~ 508 (826)
|++||+.|++....
T Consensus 313 ~spdg~~l~~~~~~ 326 (361)
T 3scy_A 313 ITPNGKYLLVACRD 326 (361)
T ss_dssp ECTTSCEEEEEETT
T ss_pred ECCCCCEEEEEECC
Confidence 89999987766543
No 239
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.50 E-value=8.2e-12 Score=134.84 Aligned_cols=281 Identities=11% Similarity=0.013 Sum_probs=174.9
Q ss_pred cCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003363 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (826)
Q Consensus 103 ~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (826)
.++|||+.++... ....+.++++.. +.....+.... ..+...+|+|||++|+.....+ .+
T Consensus 39 ~~s~~~~~l~~~~---------~dg~i~vwd~~~-~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~~dg-----~i 98 (369)
T 3zwl_B 39 KYNKEGDLLFSCS---------KDSSASVWYSLN-GERLGTLDGHT-----GTIWSIDVDCFTKYCVTGSADY-----SI 98 (369)
T ss_dssp EECTTSCEEEEEE---------SSSCEEEEETTT-CCEEEEECCCS-----SCEEEEEECTTSSEEEEEETTT-----EE
T ss_pred EEcCCCCEEEEEe---------CCCEEEEEeCCC-chhhhhhhhcC-----CcEEEEEEcCCCCEEEEEeCCC-----eE
Confidence 3489998876542 233566666532 22223333222 4588999999999999876543 46
Q ss_pred EEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceee
Q 003363 183 ELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (826)
Q Consensus 183 ~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (826)
.+| ..++..........+ ..+.|+|||+.|+....+..
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v----------~~~~~~~~~~~l~~~~~~~~------------------------------ 138 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPV----------KRVEFSPCGNYFLAILDNVM------------------------------ 138 (369)
T ss_dssp EEEETTTCCEEEEEECSSCE----------EEEEECTTSSEEEEEECCBT------------------------------
T ss_pred EEEECCCCcEEEEeecCCCe----------EEEEEccCCCEEEEecCCcc------------------------------
Confidence 666 344444444433333 78999999999998765410
Q ss_pred cCCCccCCCccCceEEEEEccCCce------------EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeee
Q 003363 261 EDWGETYAGKRQPSLFVININSGEV------------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIK 328 (826)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~------------~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~ 328 (826)
.....|.+||+.++.. ..+........+..++|+|||+. |+..+
T Consensus 139 ---------~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~----------- 194 (369)
T 3zwl_B 139 ---------KNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY----IIAGH----------- 194 (369)
T ss_dssp ---------TBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE----EEEEE-----------
T ss_pred ---------CCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE----EEEEc-----------
Confidence 0235688888765532 12211222226778899999997 76655
Q ss_pred eeccCCCceEEEEcccccchhhhhhhhcCCCC-CCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEE
Q 003363 329 YCYNRPCALYAVRVSLYKSEASELELKESSSE-DLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLH 407 (826)
Q Consensus 329 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~ 407 (826)
.+..|+++|+. . ......+..+...+....|+|||++|+..+.+ ..|+
T Consensus 195 ----~dg~i~i~d~~----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~ 243 (369)
T 3zwl_B 195 ----KDGKISKYDVS----------------NNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRD-----------TNSF 243 (369)
T ss_dssp ----TTSEEEEEETT----------------TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----------SEEE
T ss_pred ----CCCEEEEEECC----------------CCcEeEEEEecCCCceeEEEECCCCCEEEEecCC-----------ceEE
Confidence 33478899982 2 23345566667778899999999998877644 4699
Q ss_pred EEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCC-----------eEEEEEEECC
Q 003363 408 RIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS-----------SQVIISVNVS 476 (826)
Q Consensus 408 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~-----------~~~l~~vdl~ 476 (826)
+||+.++....... . ...+..+.|+|+++.+++....++ ...+..+|+.
T Consensus 244 v~d~~~~~~~~~~~----------~----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 244 LVDVSTLQVLKKYE----------T----------DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp EEETTTCCEEEEEE----------C----------SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred EEECCCCceeeeec----------C----------CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 99988755321110 0 012346789999998876654321 2267788888
Q ss_pred CCcEEEecC-CCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 477 SGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 477 tg~~~~lt~-~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
+++...... ....+....|+++++.++....+ ..|.+.++..
T Consensus 304 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~v~iw~~~~ 346 (369)
T 3zwl_B 304 FEEEIGRVQGHFGPLNTVAISPQGTSYASGGED----GFIRLHHFEK 346 (369)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEETT----SEEEEEEECH
T ss_pred CCcchhheecccCcEEEEEECCCCCEEEEEcCC----CeEEEEECcc
Confidence 877665443 34456667889988866654432 2466666543
No 240
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.50 E-value=2e-13 Score=148.80 Aligned_cols=121 Identities=16% Similarity=0.205 Sum_probs=92.8
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHC---------CcEEEEECCCCCCCCchhhhh
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSV---------GYSLLIVNYRGSLGFGEEALQ 641 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~---------G~~Vl~~d~rG~~g~G~~~~~ 641 (826)
-+|..++...+.+. .+..|.||++||.+++ ...|...+..|++. ||.|+++|+|| +|.+...
T Consensus 75 i~g~~i~~~~~~~~----~~~~~plll~HG~~~s--~~~~~~~~~~L~~~~~~~~~~~~~~~vi~~dl~G---~G~S~~~ 145 (388)
T 4i19_A 75 IDGATIHFLHVRSP----EPDATPMVITHGWPGT--PVEFLDIIGPLTDPRAHGGDPADAFHLVIPSLPG---FGLSGPL 145 (388)
T ss_dssp ETTEEEEEEEECCS----STTCEEEEEECCTTCC--GGGGHHHHHHHHCGGGGTSCGGGCEEEEEECCTT---SGGGCCC
T ss_pred ECCeEEEEEEccCC----CCCCCeEEEECCCCCC--HHHHHHHHHHHhCcccccCCCCCCeEEEEEcCCC---CCCCCCC
Confidence 36788887776654 2346789999998765 55788888888776 99999999999 5554321
Q ss_pred cCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCcc
Q 003363 642 SLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (826)
Q Consensus 642 ~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 706 (826)
. .......++.+.+..+++. ++.+++.++|||+||.+++.++.++|++++++++.+|..
T Consensus 146 ~----~~~~~~~~~a~~~~~l~~~--lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 146 K----SAGWELGRIAMAWSKLMAS--LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp S----SCCCCHHHHHHHHHHHHHH--TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred C----CCCCCHHHHHHHHHHHHHH--cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 1 1133577777777777766 345789999999999999999999999999999998643
No 241
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.49 E-value=1.2e-11 Score=132.09 Aligned_cols=245 Identities=16% Similarity=0.125 Sum_probs=138.1
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
.+...+|||||++|++....+ +.-.+|.+. .++..+.+...... +.+ ..++|||||+.|++....
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~s~dg~~l~~~~~~----- 104 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPE-FRVLAYRIAPDDGALTFAAESALP--GSL------THISTDHQGQFVFVGSYN----- 104 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTT-TEEEEEEECTTTCCEEEEEEEECS--SCC------SEEEECTTSSEEEEEETT-----
T ss_pred CCceEEECCCCCEEEEeecCC-CeEEEEEecCCCCceeeccccccC--CCC------cEEEEcCCCCEEEEEecC-----
Confidence 467789999999998876642 322333343 24454444333211 112 689999999988876432
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCC---ceEeccCCCCCCccceEEEeeCCCCCc
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG---EVQAVKGIPKSLSVGQVVWAPLNEGLH 310 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g---~~~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (826)
...|.+||+..+ +.... ......+..++|+|||+.
T Consensus 105 --------------------------------------~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~-- 142 (343)
T 1ri6_A 105 --------------------------------------AGNVSVTRLEDGLPVGVVDV--VEGLDGCHSANISPDNRT-- 142 (343)
T ss_dssp --------------------------------------TTEEEEEEEETTEEEEEEEE--ECCCTTBCCCEECTTSSE--
T ss_pred --------------------------------------CCeEEEEECCCCcccccccc--ccCCCCceEEEECCCCCE--
Confidence 256888888433 33332 233345678899999997
Q ss_pred cEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCC-Cccee-----cCC-CCccccCceecCCC
Q 003363 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVN-----LTE-SISSAFFPRFSPDG 383 (826)
Q Consensus 311 ~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~-----Lt~-~~~~~~~p~~SpDG 383 (826)
|++... ....|+++|+ .+ +.... +.. .........|+|||
T Consensus 143 --l~~~~~--------------~~~~v~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 143 --LWVPAL--------------KQDRICLFTV-----------------SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp --EEEEEG--------------GGTEEEEEEE-----------------CTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred --EEEecC--------------CCCEEEEEEe-----------------cCCCceeeecccccccCCCCCcceEEECCCC
Confidence 765541 1236888887 33 43332 221 22245567899999
Q ss_pred CEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEE
Q 003363 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 463 (826)
Q Consensus 384 ~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~ 463 (826)
++|++..... ..|.+||++....... .+..+...+. .+.+ ......++|+|||+.|+++..
T Consensus 190 ~~l~~~~~~~----------~~i~~~~~~~~~g~~~-----~~~~~~~~~~--~~~~--~~~~~~i~~s~dg~~l~v~~~ 250 (343)
T 1ri6_A 190 QYAYCVNELN----------SSVDVWELKDPHGNIE-----CVQTLDMMPE--NFSD--TRWAADIHITPDGRHLYACDR 250 (343)
T ss_dssp SEEEEEETTT----------TEEEEEESSCTTSCCE-----EEEEEECSCT--TCCS--CCCEEEEEECTTSSEEEEEET
T ss_pred CEEEEEeCCC----------CEEEEEEecCCCCcEE-----EEeeccccCc--cccc--cCCccceEECCCCCEEEEEec
Confidence 9887766432 4688888854211100 0000000000 0000 001225789999998877654
Q ss_pred eCCeEEEEEEECCCCcEEEec--CCCCCeeeEEEeecCCEEEEEEe
Q 003363 464 WGSSQVIISVNVSSGELLRIT--PAESNFSWSLLTLDGDNIIAVSS 507 (826)
Q Consensus 464 ~~~~~~l~~vdl~tg~~~~lt--~~~~~~~~~~~s~dg~~l~~~~s 507 (826)
..+...+|.++..+++.+.+. ..........|+++++.+++...
T Consensus 251 ~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 296 (343)
T 1ri6_A 251 TASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQ 296 (343)
T ss_dssp TTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECT
T ss_pred CCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecC
Confidence 445555555544366555442 12222445678999987776553
No 242
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.49 E-value=8.7e-12 Score=134.13 Aligned_cols=276 Identities=12% Similarity=0.056 Sum_probs=147.1
Q ss_pred eEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEec---CCCccc
Q 003363 127 KFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV---PQTVHG 202 (826)
Q Consensus 127 ~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~---~~~~~g 202 (826)
+.++++.++..+++...++... .......++|||||+ |+++...+ +...++.+. .++..+.+... ....
T Consensus 16 ~~i~v~~~d~~tg~~~~~~~~~---~~~~p~~~a~spdg~-l~~~~~~~-~~~~v~~~~~~~g~~~~~~~~~~~~~~p-- 88 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLTNDGLLA---ATQNPTYLALSAKDC-LYSVDKED-DEGGIAAWQIDGQTAHKLNTVVAPGTPP-- 88 (347)
T ss_dssp CEEEEEEEETTTTEEEEEEEEE---ECSCCCCEEECTTCE-EEEEEEET-TEEEEEEEEEETTEEEEEEEEEEESCCC--
T ss_pred CCEEEEEEcCCCCeEEEeeeee---ccCCcceEEEccCCe-EEEEEecC-CCceEEEEEecCCcEEEeeeeecCCCCC--
Confidence 3455555655544443332211 113467789999999 76665431 222344433 45554444432 2222
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEcc-
Q 003363 203 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ- 281 (826)
Q Consensus 203 ~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~- 281 (826)
..++|||||++|++.... ...+.+|+++
T Consensus 89 --------~~~a~spdg~~l~~~~~~-------------------------------------------~~~v~v~~~~~ 117 (347)
T 3hfq_A 89 --------AYVAVDEARQLVYSANYH-------------------------------------------KGTAEVMKIAA 117 (347)
T ss_dssp --------SEEEEETTTTEEEEEETT-------------------------------------------TTEEEEEEECT
T ss_pred --------EEEEECCCCCEEEEEeCC-------------------------------------------CCEEEEEEeCC
Confidence 688999999988876432 2467777774
Q ss_pred CCceEeccC--CCC--------CCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhh
Q 003363 282 SGEVQAVKG--IPK--------SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (826)
Q Consensus 282 ~g~~~~l~~--~~~--------~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (826)
+|+.+.+.. ..+ ...+..++|+|||+ +++... ....|+++++.
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-----l~v~~~--------------~~~~v~~~~~~-------- 170 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-----LAVIDL--------------GSDKVYVYNVS-------- 170 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-----EEEEET--------------TTTEEEEEEEC--------
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCc-----EEEEeC--------------CCCEEEEEEEC--------
Confidence 455444320 111 11345689999999 444431 22368888872
Q ss_pred hhhhcCCCCCCcceecC---CC-CccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCC--CCCCCcccceee
Q 003363 352 LELKESSSEDLPVVNLT---ES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT--NGNFSSLEKIVD 425 (826)
Q Consensus 352 ~~~~~~~~~~~~~~~Lt---~~-~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~--~~~~~~~~~~~~ 425 (826)
.++....+. .. .......+|||||++|++..... ..+.+++++. +....
T Consensus 171 --------~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~----------~~v~v~~~~~~~g~~~~------- 225 (347)
T 3hfq_A 171 --------DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS----------SQIASLKYDTQTGAFTQ------- 225 (347)
T ss_dssp --------TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT----------TEEEEEEEETTTTEEEE-------
T ss_pred --------CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC----------CEEEEEEecCCCCceEE-------
Confidence 234433221 11 12345679999999887665442 4566666553 22110
Q ss_pred eeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec---CCCCCeeeEEEeecCCEE
Q 003363 426 VIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT---PAESNFSWSLLTLDGDNI 502 (826)
Q Consensus 426 ~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt---~~~~~~~~~~~s~dg~~l 502 (826)
+..+...+. .+.+ ......++|+|||++||++....+...+|.++. +|+.+.+. ..........|++||+.|
T Consensus 226 ~~~~~~~~~--~~~~--~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~-~g~~~~~~~~~~~~~~~~~~~~spdg~~l 300 (347)
T 3hfq_A 226 LGIVKTIPA--DYTA--HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA-DGHLTLIQQISTEGDFPRDFDLDPTEAFV 300 (347)
T ss_dssp EEEEESSCT--TCCS--CCEEEEEEECTTSCEEEEEEETTTEEEEEEECG-GGCEEEEEEEECSSSCCCEEEECTTSSEE
T ss_pred eeeeeecCC--CCCC--CCcceeEEECCCCCEEEEEeCCCCEEEEEEECC-CCcEEEeEEEecCCCCcCeEEECCCCCEE
Confidence 111100010 0100 012335789999998887766556666666653 34444432 212223456789999987
Q ss_pred EEEEeCCCCCCeEEEEee
Q 003363 503 IAVSSSPVDVPQVKYGYF 520 (826)
Q Consensus 503 ~~~~s~~~~p~~l~~~~~ 520 (826)
++...... .+.+.++
T Consensus 301 ~v~~~~~~---~v~v~~~ 315 (347)
T 3hfq_A 301 VVVNQNTD---NATLYAR 315 (347)
T ss_dssp EEEETTTT---EEEEEEE
T ss_pred EEEEcCCC---cEEEEEE
Confidence 76655432 3555543
No 243
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.49 E-value=4.9e-13 Score=140.24 Aligned_cols=119 Identities=14% Similarity=0.189 Sum_probs=79.6
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcc
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQ 650 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~ 650 (826)
.+|..++.... +..|.||++||.+.. ...|...+..|+ .+|.|+++|+||. |.+............
T Consensus 12 ~~~~~~~~~~~--------g~g~~~vllHG~~~~--~~~w~~~~~~l~-~~~~vi~~Dl~G~---G~s~~~~~~~~~~~~ 77 (291)
T 3qyj_A 12 TTEARINLVKA--------GHGAPLLLLHGYPQT--HVMWHKIAPLLA-NNFTVVATDLRGY---GDSSRPASVPHHINY 77 (291)
T ss_dssp CSSCEEEEEEE--------CCSSEEEEECCTTCC--GGGGTTTHHHHT-TTSEEEEECCTTS---TTSCCCCCCGGGGGG
T ss_pred cCCeEEEEEEc--------CCCCeEEEECCCCCC--HHHHHHHHHHHh-CCCEEEEEcCCCC---CCCCCCCCCcccccc
Confidence 35566654432 134679999998765 556777777774 5899999999994 443211111011123
Q ss_pred hHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCc
Q 003363 651 DVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (826)
Q Consensus 651 ~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~ 705 (826)
..+++.+.+..+++. +..+++.|+||||||.+++.++.++|++++++|+.++.
T Consensus 78 ~~~~~~~~~~~~~~~--l~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 130 (291)
T 3qyj_A 78 SKRVMAQDQVEVMSK--LGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIA 130 (291)
T ss_dssp SHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCC
T ss_pred CHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhCchhccEEEEECCC
Confidence 344444444444444 23468999999999999999999999999999988653
No 244
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.49 E-value=3e-13 Score=146.44 Aligned_cols=288 Identities=9% Similarity=0.033 Sum_probs=165.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCC-CCeEEEEecCCceeEE---EecCCCccccccCCCcccceeecCCCCeEEEEeecC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENE-SPIQFELWSQSQLEKE---FHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEP 229 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~-~~~~~~i~~~~~~~~~---~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~ 229 (826)
..+..++|||||++||..+..... -.....+|........ .......++.| ..++|+||++.| ..+.++
T Consensus 43 ~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V------~~~~~s~d~~~l-~~s~dg 115 (357)
T 4g56_B 43 VQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGV------TDVAWVSEKGIL-VASDSG 115 (357)
T ss_dssp SEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCE------EEEEEETTTEEE-EEETTS
T ss_pred CCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCE------EEEEEcCCCCEE-EEECCC
Confidence 358899999999999987653210 0122344522111110 00001111222 789999999755 455555
Q ss_pred CCCCCCccCCCCCCCC----CCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeC
Q 003363 230 SPSKPTFSLGSTKGGS----SDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 305 (826)
Q Consensus 230 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPD 305 (826)
..+ .|+........ ....+...+....|.++....+++.....|.+||+.+++..... ......+..++|+|+
T Consensus 116 ~v~--lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~-~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 116 AVE--LWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSY-NAHSSEVNCVAACPG 192 (357)
T ss_dssp CEE--EC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTT
T ss_pred EEE--EeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEE-cCCCCCEEEEEEccC
Confidence 433 34322221111 11234555667788998555566667889999999998765441 233446778999999
Q ss_pred CCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc-eec--CCCCccccCceecCC
Q 003363 306 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL--TESISSAFFPRFSPD 382 (826)
Q Consensus 306 g~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~L--t~~~~~~~~p~~SpD 382 (826)
++. ++.++. .+..|.++|+ .+++. ..+ ......+....|+||
T Consensus 193 ~~~----~~~s~~--------------~dg~v~~wd~-----------------~~~~~~~~~~~~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 193 KDT----IFLSCG--------------EDGRILLWDT-----------------RKPKPATRIDFCASDTIPTSVTWHPE 237 (357)
T ss_dssp CSS----CEEEEE--------------TTSCEEECCT-----------------TSSSCBCBCCCTTCCSCEEEEEECTT
T ss_pred CCc----eeeeec--------------cCCceEEEEC-----------------CCCceeeeeeeccccccccchhhhhc
Confidence 986 555442 2336888887 44432 222 233445678899999
Q ss_pred CCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEE
Q 003363 383 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 462 (826)
Q Consensus 383 G~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~ 462 (826)
+..++.....+ ..|++||+.+++....... ....+..++|+|||+.++++.
T Consensus 238 ~~~~la~g~~d----------~~i~~wd~~~~~~~~~~~~-------------------~~~~v~~l~~sp~~~~~lasg 288 (357)
T 4g56_B 238 KDDTFACGDET----------GNVSLVNIKNPDSAQTSAV-------------------HSQNITGLAYSYHSSPFLASI 288 (357)
T ss_dssp STTEEEEEESS----------SCEEEEESSCGGGCEEECC-------------------CSSCEEEEEECSSSSCCEEEE
T ss_pred ccceEEEeecc----------cceeEEECCCCcEeEEEec-------------------cceeEEEEEEcCCCCCEEEEE
Confidence 76554443332 4589999877554221111 111344678999997776766
Q ss_pred EeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEee-cCCEEEEEEeCCCCCCeEEEEeec
Q 003363 463 IWGSSQVIISVNVSSGELLRITPAESNFSWSLLTL-DGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 463 ~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~-dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
..++. |..+|+.+++..+.......+....|+| +++.| ++++.... |.+-++.
T Consensus 289 s~D~~--i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l-~s~s~Dg~---v~iW~~~ 342 (357)
T 4g56_B 289 SEDCT--VAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKF-TTVGWDHK---VLHHHLP 342 (357)
T ss_dssp ETTSC--EEEECTTSCEEEEECCCSSCEEEEEECSSSTTEE-EEEETTSC---EEEEECC
T ss_pred eCCCE--EEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEE-EEEcCCCe---EEEEECC
Confidence 65555 4555888998877765555566678888 55544 44443332 5555543
No 245
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.48 E-value=1.3e-12 Score=151.20 Aligned_cols=264 Identities=18% Similarity=0.155 Sum_probs=167.1
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
..+...+|+|||+.|+.....+ .+.+| ..++..+... +..+.| ..++|+|||+.|+..+.++..+
T Consensus 263 ~~v~~v~~~~d~~~l~~~~~d~-----~i~~w~~~~~~~~~~~---~h~~~v------~~~~~~~~~~~l~t~~~d~~i~ 328 (577)
T 2ymu_A 263 SSVNGVAFRPDGQTIASASDDK-----TVKLWNRNGQLLQTLT---GHSSSV------WGVAFSPDGQTIASASDDKTVK 328 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTSCEEEEEC---CCSSCE------EEEEECTTSSEEEEEETTSCEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCC-----EEEEEeCCCcEEEEEe---cCCCCe------EEEEECCCCCEEEEEeCCCeEE
Confidence 4578899999999998876543 45677 3444433332 222223 7899999999999888766443
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccE
Q 003363 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 312 (826)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~ 312 (826)
.|+... ........+........|.++.....++.....|.+||..+..+..+ ......+..++|+|||+.
T Consensus 329 --~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~--~~~~~~v~~~~~s~dg~~---- 399 (577)
T 2ymu_A 329 --LWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL--TGHSSSVRGVAFSPDGQT---- 399 (577)
T ss_dssp --EEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEE--ECCSSCEEEEEECTTSSC----
T ss_pred --EEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEe--cCCCCCeEEEEECCCCCE----
Confidence 232111 11111122223334566788854445555678899999766666666 344456788999999998
Q ss_pred EEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEecc
Q 003363 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 392 (826)
Q Consensus 313 lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~ 392 (826)
|+..+ .+..|+++|. .+.....+..+...+....||||+++|+..+.+
T Consensus 400 l~~~~---------------~d~~v~~~~~-----------------~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 400 IASAS---------------DDKTVKLWNR-----------------NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp EEEEE---------------TTSEEEEECT-----------------TCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEe---------------CCCEEEEEeC-----------------CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCC
Confidence 88776 2236777886 455566777777778889999999998876654
Q ss_pred CCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEE
Q 003363 393 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 472 (826)
Q Consensus 393 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~ 472 (826)
..|.+||..+.....+. . +...+..++|+|||+.|+ +...++. |..
T Consensus 448 -----------~~v~~w~~~~~~~~~~~-----------~---------~~~~v~~~~~spd~~~la-s~~~d~~--i~i 493 (577)
T 2ymu_A 448 -----------KTVKLWNRNGQLLQTLT-----------G---------HSSSVRGVAFSPDGQTIA-SASDDKT--VKL 493 (577)
T ss_dssp -----------SEEEEEETTSCEEEEEE-----------C---------CSSCEEEEEECTTSCEEE-EEETTSE--EEE
T ss_pred -----------CEEEEEECCCCEEEEEc-----------C---------CCCCEEEEEEcCCCCEEE-EEeCCCE--EEE
Confidence 35888886432111110 0 111344678999999664 4444444 455
Q ss_pred EECCCCcEEEecCCCCCeeeEEEeecCCEEEEEE
Q 003363 473 VNVSSGELLRITPAESNFSWSLLTLDGDNIIAVS 506 (826)
Q Consensus 473 vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~ 506 (826)
+|..+..++.+......+....|+++++.|+...
T Consensus 494 w~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 494 WNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp EETTSCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred EcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 5765555566665555666778999998765443
No 246
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.48 E-value=4.2e-12 Score=136.66 Aligned_cols=289 Identities=12% Similarity=0.152 Sum_probs=166.7
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
.+...+|||||+.||....++ .+.+|+ ++..........+..+.| ..++|||||+.||..+.+....
T Consensus 18 ~v~~l~~sp~g~~las~~~D~-----~i~iw~~~~~~~~~~~~~~~~h~~~v------~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDR-----RIRIWGTEGDSWICKSVLSEGHQRTV------RKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTS-----CEEEEEEETTEEEEEEEECSSCSSCE------EEEEECTTSSEEEEEETTSCEE
T ss_pred cEEEEEECCCCCEEEEEcCCC-----eEEEEEcCCCcceeeeeeccccCCcE------EEEEECCCCCEEEEEECCCcEE
Confidence 478899999999999876543 456662 232222222223333344 7999999999999988776543
Q ss_pred CCCccCCCCC--CCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCce----EeccCCCCCCccceEEEeeCC
Q 003363 233 KPTFSLGSTK--GGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV----QAVKGIPKSLSVGQVVWAPLN 306 (826)
Q Consensus 233 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~----~~l~~~~~~~~~~~~~wSPDg 306 (826)
. |+..... .......+...+....|.++....+++..+..|.+||+.++.. ..+ ......+..++|+|||
T Consensus 87 i--w~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 87 I--WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL--NSHTQDVKHVVWHPSQ 162 (345)
T ss_dssp E--EEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE--CCCCSCEEEEEECSSS
T ss_pred E--EEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe--cCcCCCeEEEEECCCC
Confidence 2 3211111 1112234555566778888855556666778999999987642 223 2334467789999999
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc---ceecCCCCccccCceecCCC
Q 003363 307 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVNLTESISSAFFPRFSPDG 383 (826)
Q Consensus 307 ~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~Lt~~~~~~~~p~~SpDG 383 (826)
+. |+..+. +..|.++|+ ..+. ...+..+...+...+|||||
T Consensus 163 ~~----l~s~s~---------------d~~i~~w~~-----------------~~~~~~~~~~~~~h~~~v~~l~~sp~g 206 (345)
T 3fm0_A 163 EL----LASASY---------------DDTVKLYRE-----------------EEDDWVCCATLEGHESTVWSLAFDPSG 206 (345)
T ss_dssp SC----EEEEET---------------TSCEEEEEE-----------------ETTEEEEEEEECCCSSCEEEEEECTTS
T ss_pred CE----EEEEeC---------------CCcEEEEEe-----------------cCCCEEEEEEecCCCCceEEEEECCCC
Confidence 98 877762 235666666 2332 24566677778899999999
Q ss_pred CEEEEEeccCCCCCCCCcccceEEEEeCCCCCC-CCccc-ceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEE
Q 003363 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN-FSSLE-KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLS 461 (826)
Q Consensus 384 ~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~-~~~~~-~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~ 461 (826)
++|+..+.+. .|.+||....+. ..+.. ........+. .+.+.....+..++|++++..| ++
T Consensus 207 ~~l~s~s~D~-----------~v~iW~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~h~~~v~~v~~~~~~~~l-~s 269 (345)
T 3fm0_A 207 QRLASCSDDR-----------TVRIWRQYLPGNEQGVACSGSDPSWKCIC-----TLSGFHSRTIYDIAWCQLTGAL-AT 269 (345)
T ss_dssp SEEEEEETTS-----------CEEEEEEECTTCTTCCCCC---CEEEEEE-----EECSSCSSCEEEEEECTTTCCE-EE
T ss_pred CEEEEEeCCC-----------eEEEeccccCCCCccceeeccCCccceeE-----EecCCCCCcEEEEEEecCCCEE-EE
Confidence 9998777552 366666432221 11110 0000000000 0011112234578899999855 45
Q ss_pred EEeCCeEEEEEEECCCCc----E---EEe-cCCCCCeeeEEEeecCCEEEEEEeCCCC
Q 003363 462 SIWGSSQVIISVNVSSGE----L---LRI-TPAESNFSWSLLTLDGDNIIAVSSSPVD 511 (826)
Q Consensus 462 ~~~~~~~~l~~vdl~tg~----~---~~l-t~~~~~~~~~~~s~dg~~l~~~~s~~~~ 511 (826)
...++...+|.++..... . ..+ ......+....|+|++..++++++....
T Consensus 270 ~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~ 327 (345)
T 3fm0_A 270 ACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGE 327 (345)
T ss_dssp EETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCc
Confidence 555666777766533211 1 111 1223345666788887655655554433
No 247
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.48 E-value=2.6e-12 Score=149.85 Aligned_cols=186 Identities=10% Similarity=0.016 Sum_probs=113.8
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (826)
+||||++++-.. ....+.++++..... ....+.... ...+...+|||||++||...... +....+.
T Consensus 67 ~spdg~~lasg~---------~d~~v~lWd~~~~~~-~~~~~~~~~---~~~v~~v~fs~dg~~l~~~~~~~-~~~~~v~ 132 (611)
T 1nr0_A 67 TSPSGYYCASGD---------VHGNVRIWDTTQTTH-ILKTTIPVF---SGPVKDISWDSESKRIAAVGEGR-ERFGHVF 132 (611)
T ss_dssp ECTTSSEEEEEE---------TTSEEEEEESSSTTC-CEEEEEECS---SSCEEEEEECTTSCEEEEEECCS-SCSEEEE
T ss_pred ECCCCcEEEEEe---------CCCCEEEeECCCCcc-eeeEeeccc---CCceEEEEECCCCCEEEEEECCC-CceeEEE
Confidence 389998876432 244677777633221 111121111 14588999999999999876543 2233456
Q ss_pred EecCCceeEEEecCCCccccccCCCcccceeecCCCC-eEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecC
Q 003363 184 LWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDET-LIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEED 262 (826)
Q Consensus 184 i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~-~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 262 (826)
+|+.+.....+ .+..+.| ..++|+||++ .|+..+.+.... .|+....+.......+..++....|++|
T Consensus 133 ~wd~~~~~~~l---~gh~~~v------~~v~f~p~~~~~l~s~s~D~~v~--lwd~~~~~~~~~l~~H~~~V~~v~fspd 201 (611)
T 1nr0_A 133 LFDTGTSNGNL---TGQARAM------NSVDFKPSRPFRIISGSDDNTVA--IFEGPPFKFKSTFGEHTKFVHSVRYNPD 201 (611)
T ss_dssp ETTTCCBCBCC---CCCSSCE------EEEEECSSSSCEEEEEETTSCEE--EEETTTBEEEEEECCCSSCEEEEEECTT
T ss_pred EeeCCCCccee---cCCCCCc------eEEEECCCCCeEEEEEeCCCeEE--EEECCCCeEeeeeccccCceEEEEECCC
Confidence 67544332211 2222333 7999999998 477777766543 2332211222234456677778889999
Q ss_pred CCccCCCccCceEEEEEccCCceEeccCC------CCCCccceEEEeeCCCCCccEEEEEee
Q 003363 263 WGETYAGKRQPSLFVININSGEVQAVKGI------PKSLSVGQVVWAPLNEGLHQYLVFVGW 318 (826)
Q Consensus 263 ~g~~~~~~~~~~l~v~d~~~g~~~~l~~~------~~~~~~~~~~wSPDg~~~~~~lvf~~~ 318 (826)
.....++..+..|.+||+.+++....... .....+..++|+|||+. |+..+.
T Consensus 202 g~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~----l~s~s~ 259 (611)
T 1nr0_A 202 GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK----IASASA 259 (611)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE----EEEEET
T ss_pred CCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCE----EEEEeC
Confidence 54455666788999999988876543100 23346778999999998 877663
No 248
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.48 E-value=2.6e-12 Score=136.79 Aligned_cols=269 Identities=13% Similarity=0.086 Sum_probs=164.9
Q ss_pred cccEEEEeCCC----CCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEee
Q 003363 154 TGASAVVPSPS----GSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 227 (826)
Q Consensus 154 ~~~~~~~~SPd----G~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~ 227 (826)
..+...+|+|+ |+.|+..+..+ .+.+|+ .+.......+ .+..+.| ..+.|+|+++.|+..+.
T Consensus 33 ~~V~~v~~~~~~~~~~~~l~tgs~D~-----~v~vW~~~~~~~~~~~~l-~gh~~~v------~~~~~~~~~~~l~s~s~ 100 (321)
T 3ow8_A 33 DAIWSVAWGTNKKENSETVVTGSLDD-----LVKVWKWRDERLDLQWSL-EGHQLGV------VSVDISHTLPIAASSSL 100 (321)
T ss_dssp SCEEEEEEC-------CEEEEEETTS-----CEEEEEEETTEEEEEEEE-CCCSSCE------EEEEECSSSSEEEEEET
T ss_pred CcEEEEEEecCCCCCCCEEEEEcCCC-----CEEEEECCCCCeeeeeee-ccCCCCE------EEEEECCCCCEEEEEeC
Confidence 45899999986 55676655432 456662 2322222222 2333333 78999999999988877
Q ss_pred cCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC
Q 003363 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 307 (826)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~ 307 (826)
+...+ .|+.....................|.++....+++.....|.+||+.+++..... ......+..++|+|||+
T Consensus 101 D~~i~--lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~-~~~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 101 DAHIR--LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL-DTRGKFILSIAYSPDGK 177 (321)
T ss_dssp TSEEE--EEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEE-ECSSSCEEEEEECTTSS
T ss_pred CCcEE--EEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEe-cCCCceEEEEEECCCCC
Confidence 76543 3332222111112222333445678888555556666789999999988755431 22334577899999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEE
Q 003363 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFL 386 (826)
Q Consensus 308 ~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l 386 (826)
. |+..+ .+..|+++|+ .+++ ...+..+...+....|||||++|
T Consensus 178 ~----lasg~---------------~dg~i~iwd~-----------------~~~~~~~~~~~h~~~v~~l~~spd~~~l 221 (321)
T 3ow8_A 178 Y----LASGA---------------IDGIINIFDI-----------------ATGKLLHTLEGHAMPIRSLTFSPDSQLL 221 (321)
T ss_dssp E----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCCCEEEECTTSCEE
T ss_pred E----EEEEc---------------CCCeEEEEEC-----------------CCCcEEEEEcccCCceeEEEEcCCCCEE
Confidence 8 87765 3347889998 4444 45566667778899999999988
Q ss_pred EEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCC
Q 003363 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (826)
Q Consensus 387 ~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (826)
+..+.+ ..|.+||+.++.......+ +...+..++|+|||+.|+ +...++
T Consensus 222 ~s~s~d-----------g~i~iwd~~~~~~~~~~~~-------------------h~~~v~~~~~sp~~~~l~-s~s~D~ 270 (321)
T 3ow8_A 222 VTASDD-----------GYIKIYDVQHANLAGTLSG-------------------HASWVLNVAFCPDDTHFV-SSSSDK 270 (321)
T ss_dssp EEECTT-----------SCEEEEETTTCCEEEEECC-------------------CSSCEEEEEECTTSSEEE-EEETTS
T ss_pred EEEcCC-----------CeEEEEECCCcceeEEEcC-------------------CCCceEEEEECCCCCEEE-EEeCCC
Confidence 866654 3488999876543211000 111344678999999654 444444
Q ss_pred eEEEEEEECCCCcEEEec-CCCCCeeeEEEeecCCEEEEEE
Q 003363 467 SQVIISVNVSSGELLRIT-PAESNFSWSLLTLDGDNIIAVS 506 (826)
Q Consensus 467 ~~~l~~vdl~tg~~~~lt-~~~~~~~~~~~s~dg~~l~~~~ 506 (826)
. +..+|+.+++..... .....+....|+++++.|+...
T Consensus 271 ~--v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 271 S--VKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVG 309 (321)
T ss_dssp C--EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred c--EEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEe
Confidence 4 555577777755443 3334566667888888765444
No 249
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=99.46 E-value=6.1e-13 Score=141.35 Aligned_cols=105 Identities=22% Similarity=0.401 Sum_probs=72.4
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHH-CCcEEEEECCCCCCCCchhhhhcCCCCCC-cchHHHHHHHHHHHHHcCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVG-SQDVNDVLTAIDHVIDMGLA 668 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~-~~~~~D~~~~i~~l~~~~~~ 668 (826)
..|+||++||++.+ ...|...+..|++ .+|.|+++|+||.| .+.... ...+. ...++|+.+.++.+... +
T Consensus 37 ~~p~lvllHG~~~~--~~~w~~~~~~L~~~~~~~via~Dl~GhG---~S~~~~-~~~~~~~~~a~dl~~~l~~l~~~--~ 108 (316)
T 3c5v_A 37 EGPVLLLLHGGGHS--ALSWAVFTAAIISRVQCRIVALDLRSHG---ETKVKN-PEDLSAETMAKDVGNVVEAMYGD--L 108 (316)
T ss_dssp SSCEEEEECCTTCC--GGGGHHHHHHHHTTBCCEEEEECCTTST---TCBCSC-TTCCCHHHHHHHHHHHHHHHHTT--C
T ss_pred CCcEEEEECCCCcc--cccHHHHHHHHhhcCCeEEEEecCCCCC---CCCCCC-ccccCHHHHHHHHHHHHHHHhcc--C
Confidence 34789999997654 5578888888876 38999999999954 432110 01111 11245555666655321 1
Q ss_pred CCCcEEEEEecchHHHHHHHHHh--CCCceeEEEecCCc
Q 003363 669 NPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPL 705 (826)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~p~ 705 (826)
.+++.|+||||||.+++.+|.+ +|+ ++++|+.++.
T Consensus 109 -~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~~ 145 (316)
T 3c5v_A 109 -PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDVV 145 (316)
T ss_dssp -CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESCC
T ss_pred -CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEccc
Confidence 2689999999999999999985 576 9999988764
No 250
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.46 E-value=1.9e-12 Score=135.18 Aligned_cols=236 Identities=13% Similarity=0.180 Sum_probs=163.3
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccC
Q 003363 160 VPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSL 238 (826)
Q Consensus 160 ~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~ 238 (826)
.+++||++|+|....+ ..+++.+. ++...++++... .--+++||++|+|+.....+...
T Consensus 20 ~~~~~g~~iy~~n~~d--~~~ly~~~~dg~~~~~l~~~~--------------~~~i~~~g~~Iyy~~~~~~~~~~---- 79 (302)
T 3s25_A 20 LFCESDGEVFFSNTND--NGRLYAMNIDGSNIHKLSNDT--------------AMYINADKNYVYYVRNNNQKITS---- 79 (302)
T ss_dssp CEEEETTEEEEEEGGG--TTEEEEEETTSCSCEEEEEEE--------------EEEEEECSSEEEEEEECC---------
T ss_pred EEEEeCCEEEEEeCCC--CceEEEEcCCCCCCEEccCCc--------------eeeEEEcCCEEEEEECCCCcccc----
Confidence 3567999999986542 35799999 555777776531 23478999999999875421100
Q ss_pred CCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEee
Q 003363 239 GSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGW 318 (826)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~ 318 (826)
..+....+..||++++++++.+.|. ... ...|+|+|++ |+|+..
T Consensus 80 --------------------------~~~~~~n~~~Iy~i~~dg~~~~~l~--~~~----~~~~s~~g~~----Iy~~~~ 123 (302)
T 3s25_A 80 --------------------------QTFFSYDRNSLCRIKRNGHGSTVLD--PDP----CIYASLIGNY----IYYLHY 123 (302)
T ss_dssp ---------------------------CCSSCCSEEEEEEETTSCCCEEEE--CSC----EEEEEEETTE----EEEEEE
T ss_pred --------------------------cceeccCCCeEEEEeCCCCcceEee--cCC----ccEEEEeCCE----EEEEee
Confidence 0000113478999999999888873 221 2379999999 999862
Q ss_pred cCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCC
Q 003363 319 SSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSG 398 (826)
Q Consensus 319 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g 398 (826)
... ....||++++ ++...++|+.+.. +.|+|||++|+|.+..
T Consensus 124 ~~~-----------~~~~Iy~~~~-----------------dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g------ 165 (302)
T 3s25_A 124 DTQ-----------TATSLYRIRI-----------------DGEEKKKIKNHYL----FTCNTSDRYFYYNNPK------ 165 (302)
T ss_dssp SSS-----------SCEEEEEEET-----------------TSCCCEEEESSCC----CCSEEETTEEEEECTT------
T ss_pred cCC-----------CCceEEEEEC-----------------CCCCeEEEeCCCc----eEeeEECCEEEEEeCC------
Confidence 111 2237999998 7777888887643 5679999999999762
Q ss_pred CCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCC
Q 003363 399 AHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSG 478 (826)
Q Consensus 399 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg 478 (826)
..+|++++++++..+.+..+. . ..++.|+|+.|+++.. .....|++++++++
T Consensus 166 ----~~~Iy~~~l~g~~~~~l~~~~----------------------~-~~~~~P~g~~iy~t~~-~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 166 ----NGQLYRYDTASQSEALFYDCN----------------------C-YKPVVLDDTNVYYMDV-NRDNAIVHVNINNP 217 (302)
T ss_dssp ----TCCEEEEETTTTEEEEEECSC----------------------E-EEEEEEETTEEEEEEG-GGTTEEEEECSSSC
T ss_pred ----CceEEEEECCCCCEEEEeCCC----------------------c-cceeeecCCEEEEEEc-CCCcEEEEEECCCC
Confidence 257999999886654332111 0 1134589999998754 33379999999999
Q ss_pred cEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 479 ELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 479 ~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
..+.|+.... ..++++++.|++...... ..|+..++.+.
T Consensus 218 ~~~~Lt~~~~----~~~~~~g~~Iy~~~~~~~--~~i~~~~~DG~ 256 (302)
T 3s25_A 218 NPVVLTEANI----EHYNVYGSLIFYQRGGDN--PALCVVKNDGT 256 (302)
T ss_dssp CCEECSCSCE----EEEEEETTEEEEEECSSS--CEEEEEETTSC
T ss_pred CeEEEeCCCc----ceEEECCCEEEEEECCCC--cEEEEEECCCC
Confidence 9999875432 458999999988754433 67999988764
No 251
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.46 E-value=1.5e-11 Score=137.67 Aligned_cols=261 Identities=13% Similarity=0.045 Sum_probs=149.9
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEec-CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
.+...+|||||++|+++...+ +.-.+|.+.. .+...+.+... ...+. +..++|||||+.|+..+.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d-g~v~iwd~~~~~~~~~~~~~~~-~~~~~------v~~~~~sp~~~~l~~~~~------ 169 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD-KSLLVFDVDKTSKNVLKLRKRF-CFSKR------PNAISIAEDDTTVIIADK------ 169 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG-TEEEEEEECSSSSSCEEEEEEE-ECSSC------EEEEEECTTSSEEEEEET------
T ss_pred ceEEEEEcCCCCEEEEEECCC-CeEEEEECcCCCCceeeeeecc-cCCCC------ceEEEEcCCCCEEEEEeC------
Confidence 478899999999986554432 3333333331 44444443211 11111 278999999999988643
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEe-----ccCCCCCCccceEEEeeC---
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA-----VKGIPKSLSVGQVVWAPL--- 305 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~-----l~~~~~~~~~~~~~wSPD--- 305 (826)
...+++|++.+++... + ......+..++|+||
T Consensus 170 --------------------------------------~g~v~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~sp~~~~ 209 (450)
T 2vdu_B 170 --------------------------------------FGDVYSIDINSIPEEKFTQEPI--LGHVSMLTDVHLIKDSDG 209 (450)
T ss_dssp --------------------------------------TSEEEEEETTSCCCSSCCCCCS--EECSSCEEEEEEEECTTS
T ss_pred --------------------------------------CCcEEEEecCCcccccccceee--ecccCceEEEEEcCCCCC
Confidence 2568999988776542 2 122346778999999
Q ss_pred CCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-cee-cCCCCccccCceecCCC
Q 003363 306 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVN-LTESISSAFFPRFSPDG 383 (826)
Q Consensus 306 g~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~-Lt~~~~~~~~p~~SpDG 383 (826)
|+. |+..+ .+..|+++|+ .++. ... +..+...+..+.|| ||
T Consensus 210 ~~~----l~s~~---------------~d~~i~vwd~-----------------~~~~~~~~~~~~h~~~v~~~~~s-d~ 252 (450)
T 2vdu_B 210 HQF----IITSD---------------RDEHIKISHY-----------------PQCFIVDKWLFGHKHFVSSICCG-KD 252 (450)
T ss_dssp CEE----EEEEE---------------TTSCEEEEEE-----------------SCTTCEEEECCCCSSCEEEEEEC-ST
T ss_pred CcE----EEEEc---------------CCCcEEEEEC-----------------CCCceeeeeecCCCCceEEEEEC-CC
Confidence 776 66555 2347888888 4443 333 45667778899999 99
Q ss_pred CEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccC--CCCCc----ccccCCCCCCccccCCCE
Q 003363 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAE--GDCFP----GLYSSSILSNPWLSDGCT 457 (826)
Q Consensus 384 ~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~f~----g~~~~~~~~~~ws~Dg~~ 457 (826)
++|+..+.+ ..|.+||+.++...........+..+..... ...|. ......+..+.|+|||+.
T Consensus 253 ~~l~s~~~d-----------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 253 YLLLSAGGD-----------DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp TEEEEEESS-----------SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred CEEEEEeCC-----------CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence 998876643 4699999988664221110000000000000 00000 001123456789999998
Q ss_pred EEEEEEeCCeEEEEEE-ECCCCcEE---EecCCCCCeeeEEEeecCCEEEEEEeCCCCCC------eEEEEee
Q 003363 458 MLLSSIWGSSQVIISV-NVSSGELL---RITPAESNFSWSLLTLDGDNIIAVSSSPVDVP------QVKYGYF 520 (826)
Q Consensus 458 l~~~~~~~~~~~l~~v-dl~tg~~~---~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~------~l~~~~~ 520 (826)
|++.....+...+|.+ +..+++.+ .+... ..+....|++ +.+++...+...|. ++|.++.
T Consensus 322 l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~--~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 322 VAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN--DEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp EEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET--TEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred EEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC--CcEEEEEecccCCCCCCcceEEEEEEc
Confidence 8766545566666665 22333333 23333 4344445555 56777776666554 6666554
No 252
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.46 E-value=7.2e-14 Score=148.11 Aligned_cols=195 Identities=14% Similarity=0.128 Sum_probs=126.6
Q ss_pred CeeEEEEEEecCCCCC-CCCCcEEEEEcCCCCCCCCccchHHHHHHHH------CCcEEEEECCCCCCCCchhhhhc---
Q 003363 573 QKPFEAIFVSSSHKKD-CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS------VGYSLLIVNYRGSLGFGEEALQS--- 642 (826)
Q Consensus 573 g~~l~~~~~~P~~~~~-~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~------~G~~Vl~~d~rG~~g~G~~~~~~--- 642 (826)
+.+.+.++|.|++++. .+++|+|+++||... ..........+.. .+++||.+++.. ...++...
T Consensus 23 ~~~r~~~VylP~~y~~~~~~yPVlylldG~~~---f~~~~~~~~~l~~~~~~~~~~~IvV~i~~~~---R~~dytp~~~~ 96 (331)
T 3gff_A 23 KETREYVIALPEGYAQSLEAYPVVYLLDGEDQ---FDHMASLLQFLSQGTMPQIPKVIIVGIHNTN---RMRDYTPTHTL 96 (331)
T ss_dssp TEEEEEEEECCTTGGGSCCCEEEEEESSHHHH---HHHHHHHHHHHTCSSSCSSCCCEEEEECCSS---HHHHSCSSCCS
T ss_pred CCeEEEEEEeCCCCCCCCCCccEEEEecChhh---hHHHHHHHHHHHhhhhcCCCCEEEEEECCCC---cccccCCCccc
Confidence 5678899999999865 688999999999421 0111223344443 358899988621 11111000
Q ss_pred -----------CCCCCCcchHHHHH--HHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchh
Q 003363 643 -----------LPGKVGSQDVNDVL--TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLA 709 (826)
Q Consensus 643 -----------~~~~~~~~~~~D~~--~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~ 709 (826)
.+...+.....+.+ +.+.++.++..+++.| +|+||||||+++++++.++|++|+++++.+|...+.
T Consensus 97 ~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~~F~~~~~~S~~~w~~ 175 (331)
T 3gff_A 97 VLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRPLFSAYLALDTSLWFD 175 (331)
T ss_dssp BCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCSSCSEEEEESCCTTTT
T ss_pred cccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCchhhheeeEeCchhcCC
Confidence 00011111223322 4455666666666655 799999999999999999999999999999965321
Q ss_pred hhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCC-------CCCcHHHHHHH
Q 003363 710 LMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDL-------RVPVSNGLQYA 782 (826)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~-------~vp~~~~~~~~ 782 (826)
.. . ..+...... ........|+++.+|+.|. .++...+++++
T Consensus 176 ~~------------~--------------~~~~~~~~~-----~~~~~~~~~l~l~~G~~d~~~~~~~~~~~~~~~~~l~ 224 (331)
T 3gff_A 176 SP------------H--------------YLTLLEERV-----VKGDFKQKQLFMAIANNPLSPGFGVSSYHKDLNLAFA 224 (331)
T ss_dssp TT------------H--------------HHHHHHHHH-----HHCCCSSEEEEEEECCCSEETTTEECCHHHHHHHHHH
T ss_pred hH------------H--------------HHHHHHHHh-----hcccCCCCeEEEEeCCCCCCCccchHHHHHHHHHHHH
Confidence 00 0 001111111 1112245799999999998 57788889999
Q ss_pred HHHHhC---CCCEEEEEeCCCCCCCC
Q 003363 783 RALREK---GVETKVIVFPNDVHGIE 805 (826)
Q Consensus 783 ~~l~~~---g~~~~~~~~p~~~H~~~ 805 (826)
++|++. |+++++.+||+++|+..
T Consensus 225 ~~Lk~~~~~g~~~~~~~~pg~~H~sv 250 (331)
T 3gff_A 225 DKLTKLAPKGLGFMAKYYPEETHQSV 250 (331)
T ss_dssp HHHHHHCCTTEEEEEEECTTCCTTTH
T ss_pred HHHHhccCCCceEEEEECCCCCcccc
Confidence 999986 77899999999999764
No 253
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.46 E-value=3.3e-12 Score=138.32 Aligned_cols=267 Identities=12% Similarity=0.041 Sum_probs=141.7
Q ss_pred cCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003363 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (826)
Q Consensus 103 ~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (826)
.+||||++|++..... .....+.++.++..++....+...+. ........++ ||++|++....+ +.-.+|
T Consensus 56 ~~spdg~~l~~~~~~~-----~~~~~v~~~~~~~~~g~~~~~~~~~~--~~~~p~~~~~--dg~~l~~~~~~~-~~v~~~ 125 (361)
T 3scy_A 56 IPSADGKFVYSVNEFS-----KDQAAVSAFAFDKEKGTLHLLNTQKT--MGADPCYLTT--NGKNIVTANYSG-GSITVF 125 (361)
T ss_dssp EECTTSSEEEEEECCS-----STTCEEEEEEEETTTTEEEEEEEEEC--SSSCEEEEEE--CSSEEEEEETTT-TEEEEE
T ss_pred EECCCCCEEEEEEccC-----CCCCcEEEEEEeCCCCcEEEeeEecc--CCCCcEEEEE--CCCEEEEEECCC-CEEEEE
Confidence 3489999886654321 12245555566554344444432210 0022344555 999887665432 333333
Q ss_pred EEecCCceeE---EEecCC-CccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcce
Q 003363 183 ELWSQSQLEK---EFHVPQ-TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 258 (826)
Q Consensus 183 ~i~~~~~~~~---~~~~~~-~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (826)
.+...+.... ...... +..-.--.......+.|||||++|++....
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~------------------------------ 175 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG------------------------------ 175 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT------------------------------
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC------------------------------
Confidence 3333333221 111111 100000000011468999999988876421
Q ss_pred eecCCCccCCCccCceEEEEEccC--C----c-e------EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceee
Q 003363 259 WEEDWGETYAGKRQPSLFVININS--G----E-V------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKL 325 (826)
Q Consensus 259 ~~~d~g~~~~~~~~~~l~v~d~~~--g----~-~------~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~ 325 (826)
...|++|+++. + + + ..+. ......+..++|+|||+. |++...
T Consensus 176 -------------~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~spdg~~----l~v~~~------- 230 (361)
T 3scy_A 176 -------------TDQIHKFNINPNANADNKEKFLTKGTPEAFK-VAPGSGPRHLIFNSDGKF----AYLINE------- 230 (361)
T ss_dssp -------------TTEEEEEEECTTCCTTTCCCCEEEEEEEEEE-CCTTCCEEEEEECTTSSE----EEEEET-------
T ss_pred -------------CCEEEEEEEcCCCCcccccceeeccccccee-cCCCCCCeEEEEcCCCCE----EEEEcC-------
Confidence 24566676653 3 2 2 1111 233445678999999996 665541
Q ss_pred eeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceec------CCCCccccCceecCCCCEEEEEeccCCCCCCC
Q 003363 326 GIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL------TESISSAFFPRFSPDGKFLVFLSAKSSVDSGA 399 (826)
Q Consensus 326 g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L------t~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~ 399 (826)
....|+++++ .++..+.+ ..+......+.|||||++|+......
T Consensus 231 -------~~~~v~v~~~-----------------~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~------ 280 (361)
T 3scy_A 231 -------IGGTVIAFRY-----------------ADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK------ 280 (361)
T ss_dssp -------TTCEEEEEEE-----------------ETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS------
T ss_pred -------CCCeEEEEEe-----------------cCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC------
Confidence 2236778887 33333222 11122345789999999876544330
Q ss_pred CcccceEEEEeCC--CCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCC
Q 003363 400 HSATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS 477 (826)
Q Consensus 400 ~~~~~~l~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~t 477 (826)
...|.+|+++ ++....+ ..+.. + ..+..++|+|||++|+++....+...+|.+|..+
T Consensus 281 ---~~~i~v~~~~~~~g~~~~~--------~~~~~---g-------~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~ 339 (361)
T 3scy_A 281 ---ADGVAIFKVDETNGTLTKV--------GYQLT---G-------IHPRNFIITPNGKYLLVACRDTNVIQIFERDQAT 339 (361)
T ss_dssp ---SCEEEEEEECTTTCCEEEE--------EEEEC---S-------SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTT
T ss_pred ---CCEEEEEEEcCCCCcEEEe--------eEecC---C-------CCCceEEECCCCCEEEEEECCCCCEEEEEEECCC
Confidence 2456666664 3332111 10110 0 1234678999999888776667888999999999
Q ss_pred CcEEEecC
Q 003363 478 GELLRITP 485 (826)
Q Consensus 478 g~~~~lt~ 485 (826)
|+++.+..
T Consensus 340 g~~~~~~~ 347 (361)
T 3scy_A 340 GLLTDIKK 347 (361)
T ss_dssp CCEEECSC
T ss_pred CcEeecce
Confidence 99887753
No 254
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.46 E-value=3.8e-12 Score=140.34 Aligned_cols=294 Identities=7% Similarity=0.054 Sum_probs=168.6
Q ss_pred cCCCCcceEEEEEeech--hhcccceeEEEEEEeecCCCC-ccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCC
Q 003363 103 SGNGNGTQAMFSISQPN--LLANKRKKFMLSTVISKENEN-SVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESP 179 (826)
Q Consensus 103 ~~s~dg~~v~~~~~~~~--~~~~~~~~~l~~~~i~~~~~~-~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~ 179 (826)
.+||||+.+.++.+... +........+.++++...... ........ ..+...+|||||++|+.....+
T Consensus 19 ~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~dg---- 89 (416)
T 2pm9_A 19 AWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVD-----SKFNDLDWSHNNKIIAGALDNG---- 89 (416)
T ss_dssp CBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCS-----SCEEEEEECSSSSCEEEEESSS----
T ss_pred eeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecC-----CceEEEEECCCCCeEEEEccCC----
Confidence 45899985555432110 011123456667776433211 11111111 4588999999999999876543
Q ss_pred eEEEEecCCc----eeEEEecCCCccccccCCCcccceeecCC-CCeEEEEeecCCCCCCCccCCCCC---------CCC
Q 003363 180 IQFELWSQSQ----LEKEFHVPQTVHGSVYADGWFEGISWNSD-ETLIAYVAEEPSPSKPTFSLGSTK---------GGS 245 (826)
Q Consensus 180 ~~~~i~~~~~----~~~~~~~~~~~~g~v~~~~~~~~~~wSPD-g~~ia~~~~~~~~~~~~~~~~~~~---------~~~ 245 (826)
.+.+|+-.. ...+..+ ....+.| ..+.|+|| ++.|+..+.+..... |+..... ...
T Consensus 90 -~v~vw~~~~~~~~~~~~~~~-~~h~~~v------~~~~~~~~~~~~l~s~~~dg~v~i--wd~~~~~~~~~~~~~~~~~ 159 (416)
T 2pm9_A 90 -SLELYSTNEANNAINSMARF-SNHSSSV------KTVKFNAKQDNVLASGGNNGEIFI--WDMNKCTESPSNYTPLTPG 159 (416)
T ss_dssp -CEEEECCSSTTSCCCEEEEC-CCSSSCC------CEEEECSSSTTBEEEECSSSCEEB--CBTTTTSSCTTTCCCBCCC
T ss_pred -eEEEeecccccccccchhhc-cCCccce------EEEEEcCCCCCEEEEEcCCCeEEE--EECCCCccccccccccccc
Confidence 355662211 1222222 2222333 79999999 788887776665433 3322211 011
Q ss_pred CCccCCCCCCcceeecCCCc-cCCCccCceEEEEEccCCceEeccCCCC-----CCccceEEEeeCCCCCccEEEEEeec
Q 003363 246 SDKDCNSWKGQGDWEEDWGE-TYAGKRQPSLFVININSGEVQAVKGIPK-----SLSVGQVVWAPLNEGLHQYLVFVGWS 319 (826)
Q Consensus 246 ~~~~~~~~~~~~~~~~d~g~-~~~~~~~~~l~v~d~~~g~~~~l~~~~~-----~~~~~~~~wSPDg~~~~~~lvf~~~~ 319 (826)
....+........|.++.+. .+++.....|.+||+.+++......... ...+..++|+|||+. +++++..
T Consensus 160 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~l~~~~~ 235 (416)
T 2pm9_A 160 QSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNST----RVATATG 235 (416)
T ss_dssp CSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTT----EEEEEEC
T ss_pred cccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCC----EEEEEEC
Confidence 12334455567788888443 3444567889999999887654421221 456788999999976 6666522
Q ss_pred CcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCC--cceecC-CCCccccCceecC-CCCEEEEEeccCCC
Q 003363 320 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVVNLT-ESISSAFFPRFSP-DGKFLVFLSAKSSV 395 (826)
Q Consensus 320 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~Lt-~~~~~~~~p~~Sp-DG~~l~f~s~~~~~ 395 (826)
.. ....|+++|+ .++ ....+. .+...+....|+| ||+.|+..+.+
T Consensus 236 d~-----------~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d--- 284 (416)
T 2pm9_A 236 SD-----------NDPSILIWDL-----------------RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD--- 284 (416)
T ss_dssp CS-----------SSCCCCEEET-----------------TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS---
T ss_pred CC-----------CCceEEEEeC-----------------CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC---
Confidence 11 1126888887 332 334454 5667788999999 89888766644
Q ss_pred CCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEEC
Q 003363 396 DSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 475 (826)
Q Consensus 396 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl 475 (826)
..|++||+.+++.... +.. +...+..+.|+||+..++++...++. |..+|+
T Consensus 285 --------g~v~~wd~~~~~~~~~----------~~~---------~~~~v~~~~~s~~~~~~l~s~~~d~~--i~iw~~ 335 (416)
T 2pm9_A 285 --------NTVLLWNPESAEQLSQ----------FPA---------RGNWCFKTKFAPEAPDLFACASFDNK--IEVQTL 335 (416)
T ss_dssp --------SEEEEECSSSCCEEEE----------EEC---------SSSCCCCEEECTTCTTEEEECCSSSE--EEEEES
T ss_pred --------CCEEEeeCCCCcccee----------ecC---------CCCceEEEEECCCCCCEEEEEecCCc--EEEEEc
Confidence 4589999887543211 000 11245678999999445555554554 444566
Q ss_pred CCCc
Q 003363 476 SSGE 479 (826)
Q Consensus 476 ~tg~ 479 (826)
.+++
T Consensus 336 ~~~~ 339 (416)
T 2pm9_A 336 QNLT 339 (416)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 5544
No 255
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.45 E-value=3.5e-12 Score=137.01 Aligned_cols=268 Identities=12% Similarity=0.067 Sum_probs=165.7
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+....|||||++|+..+..+ .+.+|+ .++........ .+. +..++|||||+.|+..+.+...
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg-----~v~iWd~~~~~~~~~~~~~---~~~------v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDG-----KLIIWDSYTTNKVHAIPLR---SSW------VMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTT-----EEEEEETTTCCEEEEEECS---SSC------EEEEEECTTSSEEEEEETTCEE
T ss_pred CceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCCcceEeecC---Ccc------EEEEEECCCCCEEEEEeCCCeE
Confidence 4588999999999998876544 577774 33333322221 112 2789999999999988766543
Q ss_pred CCCCccCCCCCC----CCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC
Q 003363 232 SKPTFSLGSTKG----GSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 307 (826)
Q Consensus 232 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~ 307 (826)
. .|+...... ......+........|.++ +..+++..+..|.+||+.+++..... ......+..++|+|||+
T Consensus 122 ~--iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~~~ 197 (340)
T 1got_B 122 S--IYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTSSGDTTCALWDIETGQQTTTF-TGHTGDVMSLSLAPDTR 197 (340)
T ss_dssp E--EEETTTCSBSCEEEEEEECCSSCEEEEEEEET-TEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSS
T ss_pred E--EEECccCCCcceeEEEecCCCccEEEEEECCC-CcEEEEECCCcEEEEECCCCcEEEEE-cCCCCceEEEEECCCCC
Confidence 2 222111100 0111223333444456655 45666667889999999988765431 23344678899999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEE
Q 003363 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFL 386 (826)
Q Consensus 308 ~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l 386 (826)
. |+..+ .+..|.++|+ .++. ...+..+...+....|+|||+.|
T Consensus 198 ~----l~sg~---------------~d~~v~~wd~-----------------~~~~~~~~~~~h~~~v~~v~~~p~~~~l 241 (340)
T 1got_B 198 L----FVSGA---------------CDASAKLWDV-----------------REGMCRQTFTGHESDINAICFFPNGNAF 241 (340)
T ss_dssp E----EEEEE---------------TTSCEEEEET-----------------TTCSEEEEECCCSSCEEEEEECTTSSEE
T ss_pred E----EEEEe---------------CCCcEEEEEC-----------------CCCeeEEEEcCCcCCEEEEEEcCCCCEE
Confidence 6 66554 3347888998 4443 45666677778899999999998
Q ss_pred EEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCC
Q 003363 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (826)
Q Consensus 387 ~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (826)
+..+.+ ..|.+||+.++..... .. ... ....+..++|+|||+.|+. ...++
T Consensus 242 ~s~s~d-----------~~v~iwd~~~~~~~~~----------~~--~~~-----~~~~v~~~~~s~~g~~l~~-g~~d~ 292 (340)
T 1got_B 242 ATGSDD-----------ATCRLFDLRADQELMT----------YS--HDN-----IICGITSVSFSKSGRLLLA-GYDDF 292 (340)
T ss_dssp EEEETT-----------SCEEEEETTTTEEEEE----------EC--CTT-----CCSCEEEEEECTTSSEEEE-EETTS
T ss_pred EEEcCC-----------CcEEEEECCCCcEEEE----------Ec--cCC-----cccceEEEEECCCCCEEEE-ECCCC
Confidence 866654 3588999877443110 00 000 0012346789999996654 44344
Q ss_pred eEEEEEEECCCCcEEE-ecCCCCCeeeEEEeecCCEEEEEE
Q 003363 467 SQVIISVNVSSGELLR-ITPAESNFSWSLLTLDGDNIIAVS 506 (826)
Q Consensus 467 ~~~l~~vdl~tg~~~~-lt~~~~~~~~~~~s~dg~~l~~~~ 506 (826)
.+..+|+.+++... +......+....|++++..|+...
T Consensus 293 --~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s 331 (340)
T 1got_B 293 --NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGS 331 (340)
T ss_dssp --EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred --eEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEc
Confidence 45666877766544 344444566667888887655443
No 256
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.44 E-value=2.1e-12 Score=134.35 Aligned_cols=218 Identities=15% Similarity=0.154 Sum_probs=135.1
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECC--------CCCCCCchhhhhc-
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNY--------RGSLGFGEEALQS- 642 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~--------rG~~g~G~~~~~~- 642 (826)
....+...+|+|++ ..++.|+||.+||+... ..+||+|+.+++ +|+.|+|. +.+.
T Consensus 88 ~s~~~~~~i~lP~~--~~~p~Pvii~i~~~~~~-------------~~~G~a~~~~~~~~v~~~~~~gs~g~g~-f~~ly 151 (375)
T 3pic_A 88 KSISFTVTITYPSS--GTAPYPAIIGYGGGSLP-------------APAGVAMINFNNDNIAAQVNTGSRGQGK-FYDLY 151 (375)
T ss_dssp EEEEEEEEEECCSS--SCSSEEEEEEETTCSSC-------------CCTTCEEEEECHHHHSCCSSGGGTTCSH-HHHHH
T ss_pred ceeEEEEEEECCCC--CCCCccEEEEECCCccc-------------cCCCeEEEEecccccccccCCCCcccee-ccccc
Confidence 34568899999984 35789999999985322 257999999987 55556665 3211
Q ss_pred -CCCCCCcch--HHHHHHHHHHHHHcC--CCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc-----
Q 003363 643 -LPGKVGSQD--VNDVLTAIDHVIDMG--LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV----- 712 (826)
Q Consensus 643 -~~~~~~~~~--~~D~~~~i~~l~~~~--~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~----- 712 (826)
....++... .-++..+++||..++ .+|++||+++|||+||..++++++.. ++|+++|..++.++-....
T Consensus 152 ~~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~~G~~~~R~~~~ 230 (375)
T 3pic_A 152 GSSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGAGGSACWRISDY 230 (375)
T ss_dssp CTTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCTTTTSCHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCCCchhhhhhhhh
Confidence 123444443 358999999999988 89999999999999999999999985 5899999987654321110
Q ss_pred ----cCC-C-------CCCchhhhhccCcCCccCCCCCChhhHHHHhhcCccc---ccCCC-CCcEEEEEeCCCCCCCcH
Q 003363 713 ----GTT-D-------IPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPIS---HISKV-KTPTIFLLGAQDLRVPVS 776 (826)
Q Consensus 713 ----~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~---~~~~i-~~PvLii~G~~D~~vp~~ 776 (826)
+.. . ...|+ ...+ ..|... ...-|.. .+.-+ ..|+|++.| .|..+++.
T Consensus 231 ~~~~Ge~v~~~~~~~~e~~Wf-~~~~-----~~y~~~---------~~~lP~D~h~L~ALiAPRPllv~~g-~D~w~~~~ 294 (375)
T 3pic_A 231 LKSQGANIQTASEIIGEDPWF-STTF-----NSYVNQ---------VPVLPFDHHSLAALIAPRGLFVIDN-NIDWLGPQ 294 (375)
T ss_dssp HHHTTCCCCCHHHHTTTCSCS-CGGG-----GGTTTC---------GGGSSCCHHHHHHTSTTSEEEEECC-CCGGGCHH
T ss_pred hcccCccccccccccCccccc-ccch-----hhhccc---------ccccCcCHHHHHHHhCCceEEEecC-CCcccCcH
Confidence 000 0 00111 0000 001000 0001111 11222 257999999 99999887
Q ss_pred HHHHHHHHH----HhCCC--CEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 777 NGLQYARAL----REKGV--ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 777 ~~~~~~~~l----~~~g~--~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
.....+.++ +..|+ .+.+.+..+.+|+.. +. +..+.+.+||+++|+
T Consensus 295 g~~~~~~~a~~VY~~lG~~d~~~~~~~ggH~Hc~f-p~---~~~~~~~~F~~k~L~ 346 (375)
T 3pic_A 295 SCFGCMTAAHMAWQALGVSDHMGYSQIGAHAHCAF-PS---NQQSQLTAFVQKFLL 346 (375)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGEEEECCSCCSTTCC-CG---GGHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHcCCccceEEEeeCCCccccC-CH---HHHHHHHHHHHHHhC
Confidence 665444444 33354 466654333345322 22 234789999999985
No 257
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.44 E-value=2.1e-12 Score=137.51 Aligned_cols=236 Identities=14% Similarity=0.096 Sum_probs=150.1
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+....|+|++..++..+..+ .+.+|+ .++..+.+.... ..+ ..++|||||+.|+..+.+...
T Consensus 81 ~~v~~~~~~~~~~~l~s~s~D~-----~i~lWd~~~~~~~~~~~~~~---~~~------~~~~~spdg~~l~~g~~dg~v 146 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSSLDA-----HIRLWDLENGKQIKSIDAGP---VDA------WTLAFSPDSQYLATGTHVGKV 146 (321)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECCT---TCC------CCEEECTTSSEEEEECTTSEE
T ss_pred CCEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCCEEEEEeCCC---ccE------EEEEECCCCCEEEEEcCCCcE
Confidence 4588899999999988776543 567773 333333332211 111 689999999999987765532
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (826)
. .|+............+........|.++....+++..+..|.+||+.+++..... ......+..++|+|||+.
T Consensus 147 ~--i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spd~~~--- 220 (321)
T 3ow8_A 147 N--IFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTFSPDSQL--- 220 (321)
T ss_dssp E--EEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCCCEEEECTTSCE---
T ss_pred E--EEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE-cccCCceeEEEEcCCCCE---
Confidence 2 2222111111112223334456678888555566667789999999988765431 233456789999999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEec
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 391 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~ 391 (826)
|+..+ .+..|.++|+. .......+..+...+...+|+|||++|+..+.
T Consensus 221 -l~s~s---------------~dg~i~iwd~~----------------~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 268 (321)
T 3ow8_A 221 -LVTAS---------------DDGYIKIYDVQ----------------HANLAGTLSGHASWVLNVAFCPDDTHFVSSSS 268 (321)
T ss_dssp -EEEEC---------------TTSCEEEEETT----------------TCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred -EEEEc---------------CCCeEEEEECC----------------CcceeEEEcCCCCceEEEEECCCCCEEEEEeC
Confidence 76655 33468888982 22334566777777889999999999887665
Q ss_pred cCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEE
Q 003363 392 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 471 (826)
Q Consensus 392 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~ 471 (826)
+ ..|.+||+.++........ +...+..+.|+|||+.| ++...++...||
T Consensus 269 D-----------~~v~iwd~~~~~~~~~~~~-------------------h~~~v~~v~~s~~g~~l-~s~~~d~~i~vw 317 (321)
T 3ow8_A 269 D-----------KSVKVWDVGTRTCVHTFFD-------------------HQDQVWGVKYNGNGSKI-VSVGDDQEIHIY 317 (321)
T ss_dssp T-----------SCEEEEETTTTEEEEEECC-------------------CSSCEEEEEECTTSSEE-EEEETTCCEEEE
T ss_pred C-----------CcEEEEeCCCCEEEEEEcC-------------------CCCcEEEEEECCCCCEE-EEEeCCCeEEEE
Confidence 4 3588999877543211100 11134467899999866 455555665665
Q ss_pred E
Q 003363 472 S 472 (826)
Q Consensus 472 ~ 472 (826)
-
T Consensus 318 d 318 (321)
T 3ow8_A 318 D 318 (321)
T ss_dssp E
T ss_pred e
Confidence 3
No 258
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.42 E-value=1.1e-12 Score=141.90 Aligned_cols=286 Identities=11% Similarity=0.029 Sum_probs=160.1
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (826)
+||||++|+-..... ..-....++++....... ...+...... ....+...+|||||+.|+ .... + .+.
T Consensus 50 fSpDG~~las~s~d~---~~~wd~~v~~~~~~~~~~-~~~~~~~~~~-~~~~V~~~~~s~d~~~l~-~s~d--g---~v~ 118 (357)
T 4g56_B 50 YRRDGALLLAASSLS---SRTWGGSIWVFKDPEGAP-NESLCTAGVQ-TEAGVTDVAWVSEKGILV-ASDS--G---AVE 118 (357)
T ss_dssp ECSSSCEEEEEECSS---SSSCCEEEEEESSCC----CGGGCSEEEE-CSSCEEEEEEETTTEEEE-EETT--S---CEE
T ss_pred ECCCCCEEEEEcCCC---CccccCeEEEEECCCCCc-ceeEecccCC-CCCCEEEEEEcCCCCEEE-EECC--C---EEE
Confidence 399999887543221 011245677766432211 1111110000 013588999999997665 3332 2 355
Q ss_pred Eec--CCceeEEEec-CCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceee
Q 003363 184 LWS--QSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (826)
Q Consensus 184 i~~--~~~~~~~~~~-~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (826)
+|+ .++....... ..+..+.| ..++|||||+.|+..+.+.... .|+............+...+....|.
T Consensus 119 lWd~~~~~~~~~~~~~~~~h~~~V------~~v~~spdg~~l~sgs~dg~v~--iwd~~~~~~~~~~~~h~~~v~~v~~s 190 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEHDDIV------KTLSVFSDGTQAVSGGKDFSVK--VWDLSQKAVLKSYNAHSSEVNCVAAC 190 (357)
T ss_dssp EC--------CCCCEEECCCSSCE------EEEEECSSSSEEEEEETTSCEE--EEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EeeccccceeEEEeeccCCCCCCE------EEEEECCCCCEEEEEeCCCeEE--EEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 663 2221111111 11222233 7899999999999888776543 33322222222233344445566677
Q ss_pred cCCCcc-CCCccCceEEEEEccCCceEec-cCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceE
Q 003363 261 EDWGET-YAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 338 (826)
Q Consensus 261 ~d~g~~-~~~~~~~~l~v~d~~~g~~~~l-~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~ 338 (826)
++.... ++...+..|.+||+.+++.... ........+..++|+|++.. ++.++. .+..|+
T Consensus 191 ~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~----~la~g~--------------~d~~i~ 252 (357)
T 4g56_B 191 PGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDD----TFACGD--------------ETGNVS 252 (357)
T ss_dssp TTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTT----EEEEEE--------------SSSCEE
T ss_pred cCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccc----eEEEee--------------ccccee
Confidence 764333 3455568899999988875443 11233445678999999887 766552 234688
Q ss_pred EEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCE-EEEEeccCCCCCCCCcccceEEEEeCCCCCCC
Q 003363 339 AVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKF-LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF 417 (826)
Q Consensus 339 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~-l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~ 417 (826)
++|+. .......+..+...+...+|||||+. |+..+.+ ..|++||+.+++..
T Consensus 253 ~wd~~----------------~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D-----------~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 253 LVNIK----------------NPDSAQTSAVHSQNITGLAYSYHSSPFLASISED-----------CTVAVLDADFSEVF 305 (357)
T ss_dssp EEESS----------------CGGGCEEECCCSSCEEEEEECSSSSCCEEEEETT-----------SCEEEECTTSCEEE
T ss_pred EEECC----------------CCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCC-----------CEEEEEECCCCcEe
Confidence 89982 22334566666777888999999965 4444433 35899998875432
Q ss_pred CcccceeeeeeeeeccCCCCCcccccCCCCCCcccc-CCCEEEEEEEeCCeEEEEEEE
Q 003363 418 SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSIWGSSQVIISVN 474 (826)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~-Dg~~l~~~~~~~~~~~l~~vd 474 (826)
.... +...+..++|+| |++. +++...++...+|.++
T Consensus 306 ~~~~--------------------H~~~V~~vafsP~d~~~-l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 306 RDLS--------------------HRDFVTGVAWSPLDHSK-FTTVGWDHKVLHHHLP 342 (357)
T ss_dssp EECC--------------------CSSCEEEEEECSSSTTE-EEEEETTSCEEEEECC
T ss_pred EECC--------------------CCCCEEEEEEeCCCCCE-EEEEcCCCeEEEEECC
Confidence 1110 112345778998 7774 4566666666666554
No 259
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.41 E-value=1.1e-11 Score=136.08 Aligned_cols=275 Identities=15% Similarity=0.068 Sum_probs=154.9
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCcc---------ccccCCCcccceeecCCCCeE
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVH---------GSVYADGWFEGISWNSDETLI 222 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~---------g~v~~~~~~~~~~wSPDg~~i 222 (826)
..+...+|||||++||...+. ...+| ..++....+....... ...-.+..+..++|||||+.|
T Consensus 65 ~~V~~v~fspdg~~la~g~~~------~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGCNK------TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp SCCCEEEECTTSSEEEEECBS------CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred CEEEEEEECCCCCEEEEEcCC------cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 347889999999999986432 23455 2333332221110000 000001134789999999999
Q ss_pred EEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEE
Q 003363 223 AYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVW 302 (826)
Q Consensus 223 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~w 302 (826)
|..+.+.... .|+............+...+....|.++....+++..+..|.+||+.+++.... ......+..++|
T Consensus 139 ~s~~~d~~i~--iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~ 214 (393)
T 1erj_A 139 ATGAEDRLIR--IWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT--LSIEDGVTTVAV 214 (393)
T ss_dssp EEEETTSCEE--EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEE
T ss_pred EEEcCCCeEE--EEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEE--EEcCCCcEEEEE
Confidence 9988776543 333222222222334555556777888865666677788999999999876544 233445778899
Q ss_pred ee-CCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceec-------CCCCcc
Q 003363 303 AP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNL-------TESISS 373 (826)
Q Consensus 303 SP-Dg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~L-------t~~~~~ 373 (826)
+| ||+. |+..+ .+..|.++|+ .++. ...+ ..+...
T Consensus 215 ~~~~~~~----l~~~s---------------~d~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~h~~~ 258 (393)
T 1erj_A 215 SPGDGKY----IAAGS---------------LDRAVRVWDS-----------------ETGFLVERLDSENESGTGHKDS 258 (393)
T ss_dssp CSTTCCE----EEEEE---------------TTSCEEEEET-----------------TTCCEEEEEC------CCCSSC
T ss_pred ECCCCCE----EEEEc---------------CCCcEEEEEC-----------------CCCcEEEeecccccCCCCCCCC
Confidence 99 7876 66555 2336778887 3333 2233 345566
Q ss_pred ccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccce--eeeeeeeeccCCCCCcccccCCCCCCcc
Q 003363 374 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI--VDVIPVVQCAEGDCFPGLYSSSILSNPW 451 (826)
Q Consensus 374 ~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~f~g~~~~~~~~~~w 451 (826)
+....|+|||++|+..+.+ ..|.+||+.+.......... ......+ .| +...+..++|
T Consensus 259 v~~v~~~~~g~~l~s~s~d-----------~~v~~wd~~~~~~~~~~~~~~~~~~~~~~--------~~-h~~~v~~~~~ 318 (393)
T 1erj_A 259 VYSVVFTRDGQSVVSGSLD-----------RSVKLWNLQNANNKSDSKTPNSGTCEVTY--------IG-HKDFVLSVAT 318 (393)
T ss_dssp EEEEEECTTSSEEEEEETT-----------SEEEEEEC---------------CEEEEE--------EC-CSSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEeCC-----------CEEEEEECCCCCCcccccCCCCCcceEEE--------ec-ccCcEEEEEE
Confidence 7889999999998766544 45888998764432110000 0000000 00 1123446789
Q ss_pred ccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC-CCeeeEEEee
Q 003363 452 LSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTL 497 (826)
Q Consensus 452 s~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~-~~~~~~~~s~ 497 (826)
++|++.|+ +...++ .+..+|+.+++........ ..+....+++
T Consensus 319 ~~~~~~l~-sgs~D~--~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~ 362 (393)
T 1erj_A 319 TQNDEYIL-SGSKDR--GVLFWDKKSGNPLLMLQGHRNSVISVAVAN 362 (393)
T ss_dssp CGGGCEEE-EEETTS--EEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred CCCCCEEE-EEeCCC--eEEEEECCCCeEEEEECCCCCCEEEEEecC
Confidence 99998664 444344 4666788888765544332 3333344444
No 260
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.40 E-value=2.7e-11 Score=130.75 Aligned_cols=245 Identities=13% Similarity=0.153 Sum_probs=152.7
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|||||++|+.....+ .+.+|+ .++...... ...+.| ..+.|+|||+.|+..+.+
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~---~h~~~v------~~~~~~~~~~~l~s~~~d--- 95 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDS-----SASVWYSLNGERLGTLD---GHTGTI------WSIDVDCFTKYCVTGSAD--- 95 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSS-----CEEEEETTTCCEEEEEC---CCSSCE------EEEEECTTSSEEEEEETT---
T ss_pred ceEEEEEEcCCCCEEEEEeCCC-----EEEEEeCCCchhhhhhh---hcCCcE------EEEEEcCCCCEEEEEeCC---
Confidence 4588999999999999876543 456663 333333332 222223 789999999999876432
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (826)
..|.+||+.+++.... ......+..+.|+|||+.
T Consensus 96 -----------------------------------------g~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~--- 129 (369)
T 3zwl_B 96 -----------------------------------------YSIKLWDVSNGQCVAT--WKSPVPVKRVEFSPCGNY--- 129 (369)
T ss_dssp -----------------------------------------TEEEEEETTTCCEEEE--EECSSCEEEEEECTTSSE---
T ss_pred -----------------------------------------CeEEEEECCCCcEEEE--eecCCCeEEEEEccCCCE---
Confidence 5799999998887665 345556788999999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCc--cccCceecCCCCEEEEE
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESIS--SAFFPRFSPDGKFLVFL 389 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~--~~~~p~~SpDG~~l~f~ 389 (826)
|+....... .....|+.+|+......... ..........+....+ .+....|+|||+.|+..
T Consensus 130 -l~~~~~~~~----------~~~g~i~~~d~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 193 (369)
T 3zwl_B 130 -FLAILDNVM----------KNPGSINIYEIERDSATHEL-----TKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG 193 (369)
T ss_dssp -EEEEECCBT----------TBCCEEEEEEEEECTTTCCE-----EEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE
T ss_pred -EEEecCCcc----------CCCCEEEEEEecCCccceee-----cccccceeeeccCCcCccceeEEEEcCCCCEEEEE
Confidence 777653210 12236777776321000000 0001112233333333 67888999999988876
Q ss_pred eccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEE
Q 003363 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 469 (826)
Q Consensus 390 s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~ 469 (826)
+.+ ..|++||+.++... ...... ....+..+.|+||++.|+.. ..+ ..
T Consensus 194 ~~d-----------g~i~i~d~~~~~~~---------~~~~~~---------~~~~v~~~~~~~~~~~l~~~-~~d--~~ 241 (369)
T 3zwl_B 194 HKD-----------GKISKYDVSNNYEY---------VDSIDL---------HEKSISDMQFSPDLTYFITS-SRD--TN 241 (369)
T ss_dssp ETT-----------SEEEEEETTTTTEE---------EEEEEC---------CSSCEEEEEECTTSSEEEEE-ETT--SE
T ss_pred cCC-----------CEEEEEECCCCcEe---------EEEEec---------CCCceeEEEECCCCCEEEEe-cCC--ce
Confidence 543 46899998773221 111100 11134467899999977544 333 35
Q ss_pred EEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCC
Q 003363 470 IISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSP 509 (826)
Q Consensus 470 l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~ 509 (826)
|..+|+.+++...............+++++..+++...+.
T Consensus 242 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 242 SFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC
T ss_pred EEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCC
Confidence 7777888888776665555566778999998877766543
No 261
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.40 E-value=5.4e-11 Score=129.03 Aligned_cols=295 Identities=12% Similarity=0.106 Sum_probs=145.3
Q ss_pred EEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCC
Q 003363 128 FMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYAD 207 (826)
Q Consensus 128 ~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~ 207 (826)
.|+.+.++..+++...+...+.. ........+|||||++|+..... .-.+|.+...++..++.... .+|..
T Consensus 15 ~i~~~~~d~~~g~l~~~~~~~~~-~~~~~~~~a~spdg~~l~~~~~~---~v~~~~~~~~g~~~~~~~~~--~~g~~--- 85 (365)
T 1jof_A 15 AIFTVQFDDEKLTCKLIKRTEIP-QDEPISWMTFDHERKNIYGAAMK---KWSSFAVKSPTEIVHEASHP--IGGHP--- 85 (365)
T ss_dssp EEEEEEEETTTTEEEEEEEEECC-TTCCCSEEEECTTSSEEEEEEBT---EEEEEEEEETTEEEEEEEEE--CCSSG---
T ss_pred cEEEEEEECCCCCEEEeeEEccC-CCCCCcEEEECCCCCEEEEEccc---eEEEEEECCCCCEEEeeEee--cCCCC---
Confidence 46666665444443333221000 01246678999999988765442 22233332255554443321 11111
Q ss_pred CcccceeecCCCCeE-EEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEcc-CCce
Q 003363 208 GWFEGISWNSDETLI-AYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEV 285 (826)
Q Consensus 208 ~~~~~~~wSPDg~~i-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~g~~ 285 (826)
..++|||||++| +|++...... .+.. +.+. ....+.+|+++ .|+.
T Consensus 86 ---~~~~~spdg~~l~~~~~~~~~~~-------------------------~~~~---~~~~--~~g~v~v~~~~~~g~~ 132 (365)
T 1jof_A 86 ---RANDADTNTRAIFLLAAKQPPYA-------------------------VYAN---PFYK--FAGYGNVFSVSETGKL 132 (365)
T ss_dssp ---GGGCTTSCCEEEEEEECSSTTCC-------------------------EEEE---EESS--SCCEEEEEEECTTCCE
T ss_pred ---ccEEECCCCCEEEEEEecCCcce-------------------------eccc---eeec--CCceEEEEccCCCCcC
Confidence 568999999974 5554311000 0000 0000 12457777775 3554
Q ss_pred Ee-ccCC--CCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCC-C
Q 003363 286 QA-VKGI--PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE-D 361 (826)
Q Consensus 286 ~~-l~~~--~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-~ 361 (826)
.. +... .....+..++|||||+. |+... . ....|+++|+ + +
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~spdG~~----l~~~~-~-------------~~~~v~~~~~-----------------~~~ 177 (365)
T 1jof_A 133 EKNVQNYEYQENTGIHGMVFDPTETY----LYSAD-L-------------TANKLWTHRK-----------------LAS 177 (365)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSE----EEEEE-T-------------TTTEEEEEEE-----------------CTT
T ss_pred cceEeeEEeCCCCcceEEEECCCCCE----EEEEc-C-------------CCCEEEEEEE-----------------CCC
Confidence 32 2101 12335678999999996 65443 2 1236888887 4 4
Q ss_pred Ccceec---C--CCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCC--CCCCCCcccceeeeeeeeeccC
Q 003363 362 LPVVNL---T--ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAE 434 (826)
Q Consensus 362 ~~~~~L---t--~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~--~~~~~~~~~~~~~~~~~~~~~~ 434 (826)
++...+ . .+........|||||++|+...... ..+.+++++ ++..... . ..+... +.
T Consensus 178 g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~----------~~v~v~~~~~~~g~~~~~---~-~~~~~~--~~ 241 (365)
T 1jof_A 178 GEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG----------NRICEYVIDPATHMPVYT---H-HSFPLI--PP 241 (365)
T ss_dssp SCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT----------TEEEEEEECTTTCCEEEE---E-EEEESS--CT
T ss_pred CCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC----------CeEEEEEEeCCCCcEEEc---c-ceEEcC--CC
Confidence 544322 1 1123456679999999887665432 345555443 4332100 0 001111 10
Q ss_pred CCCCcccc-----cCCCCCCc-cccCCCEEEEEEEeCC-----eEEEEEEECCCCcEEEe---cC-CCCCeeeEEEee--
Q 003363 435 GDCFPGLY-----SSSILSNP-WLSDGCTMLLSSIWGS-----SQVIISVNVSSGELLRI---TP-AESNFSWSLLTL-- 497 (826)
Q Consensus 435 ~~~f~g~~-----~~~~~~~~-ws~Dg~~l~~~~~~~~-----~~~l~~vdl~tg~~~~l---t~-~~~~~~~~~~s~-- 497 (826)
. +.|.- ......++ |+|||++||++..... ...+|.++. +|+++++ .. .........++|
T Consensus 242 ~--~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~-~g~~~~~~~~~~~~~~~~~~~a~sp~~ 318 (365)
T 1jof_A 242 G--IPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRD-CGSIEKQLFLSPTPTSGGHSNAVSPCP 318 (365)
T ss_dssp T--CCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECT-TSCEEEEEEEEECSSCCTTCCCEEECT
T ss_pred C--cCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECC-CCCEEEeeeeeecCCCCcccceecCCC
Confidence 0 00000 00133678 9999998876554433 455665543 6777652 11 122233457889
Q ss_pred -cCCEEEEEEeCCCCCCeEEEEeec
Q 003363 498 -DGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 498 -dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
||+.+++..... ..|.+.+..
T Consensus 319 ~dg~~l~v~~~~~---~~v~v~~~~ 340 (365)
T 1jof_A 319 WSDEWMAITDDQE---GWLEIYRWK 340 (365)
T ss_dssp TCTTEEEEECSSS---CEEEEEEEE
T ss_pred cCCCEEEEEEcCC---CeEEEEEEc
Confidence 788766554332 235555543
No 262
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.40 E-value=6.1e-11 Score=129.37 Aligned_cols=277 Identities=10% Similarity=0.046 Sum_probs=166.3
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|||||++|+..+..+ .+.+|+ .++....+.. .... +..++|||||+.||..+.+...
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~-----~v~iWd~~~~~~~~~~~~---h~~~------v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDG-----RLIVWNALTSQKTHAIKL---HCPW------VMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTS-----EEEEEETTTTEEEEEEEC---CCTT------CCCCEECTTSSEEEECCSSSCC
T ss_pred cEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCccceEEec---CCCC------EEEEEECCCCCEEEEeeCCCcE
Confidence 4588999999999999876654 677884 3333333221 1122 3789999999999988777654
Q ss_pred CCCCccCCC-----CCCCCCCccCCCCCCcceeecCCCc-cCCCccCceEEEEEccCCceEeccC----CCCCCccceEE
Q 003363 232 SKPTFSLGS-----TKGGSSDKDCNSWKGQGDWEEDWGE-TYAGKRQPSLFVININSGEVQAVKG----IPKSLSVGQVV 301 (826)
Q Consensus 232 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~d~g~-~~~~~~~~~l~v~d~~~g~~~~l~~----~~~~~~~~~~~ 301 (826)
..+...... .........+........|.++-+. .+++..+..|.+||+.+++.....+ ......+..+.
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 422221110 0111223345555556667665433 4556677899999999987654421 11233566788
Q ss_pred Eee-CCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceec
Q 003363 302 WAP-LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFS 380 (826)
Q Consensus 302 wSP-Dg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~S 380 (826)
|+| +++. |+..+ .+..|.++|+.. .......+..+...+....|+
T Consensus 213 ~~~~~~~~----l~sgs---------------~D~~v~~wd~~~---------------~~~~~~~~~~h~~~v~~v~~~ 258 (380)
T 3iz6_a 213 INSLNANM----FISGS---------------CDTTVRLWDLRI---------------TSRAVRTYHGHEGDINSVKFF 258 (380)
T ss_dssp ECSSSCCE----EEEEE---------------TTSCEEEEETTT---------------TCCCCEEECCCSSCCCEEEEC
T ss_pred eecCCCCE----EEEEE---------------CCCeEEEEECCC---------------CCcceEEECCcCCCeEEEEEe
Confidence 877 6664 54444 334788888721 123345666777788999999
Q ss_pred CCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEE
Q 003363 381 PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 460 (826)
Q Consensus 381 pDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~ 460 (826)
|||++|+..+.+ ..|.+||+.++..... +....... . .....+..++|+|||+.|+.
T Consensus 259 p~~~~l~s~s~D-----------~~i~lwd~~~~~~~~~----------~~~~~~~~-~-~~~~~v~~~~~s~~g~~l~~ 315 (380)
T 3iz6_a 259 PDGQRFGTGSDD-----------GTCRLFDMRTGHQLQV----------YNREPDRN-D-NELPIVTSVAFSISGRLLFA 315 (380)
T ss_dssp TTSSEEEEECSS-----------SCEEEEETTTTEEEEE----------ECCCCSSS-C-CSSCSCSEEEECSSSSEEEE
T ss_pred cCCCeEEEEcCC-----------CeEEEEECCCCcEEEE----------eccccccc-c-cccCceEEEEECCCCCEEEE
Confidence 999998866654 3589999887553211 11100000 0 00012456789999996654
Q ss_pred EEEeCCeEEEEEEECCCCcEEEec-----CCCCCeeeEEEeecCCEEEE
Q 003363 461 SSIWGSSQVIISVNVSSGELLRIT-----PAESNFSWSLLTLDGDNIIA 504 (826)
Q Consensus 461 ~~~~~~~~~l~~vdl~tg~~~~lt-----~~~~~~~~~~~s~dg~~l~~ 504 (826)
. .. +..++.+|+.+++...-. .....+....|+++|..|+.
T Consensus 316 g-~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 316 G-YS--NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCT 361 (380)
T ss_dssp E-CT--TSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEE
T ss_pred E-EC--CCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEE
Confidence 3 33 345666788777654322 22234556688999886543
No 263
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.40 E-value=2.7e-11 Score=130.32 Aligned_cols=293 Identities=9% Similarity=-0.013 Sum_probs=167.9
Q ss_pred cCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCC---CCeEEEEecCCCCCC
Q 003363 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPS---GSKLLVVRNPENESP 179 (826)
Q Consensus 103 ~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPd---G~~la~~~~~~~~~~ 179 (826)
.++|||..++...+.. .....+.++++.+............ ..+...+|+|+ |+.|+.....+
T Consensus 25 ~~~p~~~~l~~~~s~~-----~~d~~v~iw~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~l~~~~~dg---- 90 (357)
T 3i2n_A 25 KWVPCSAKFVTMGNFA-----RGTGVIQLYEIQHGDLKLLREIEKA-----KPIKCGTFGATSLQQRYLATGDFGG---- 90 (357)
T ss_dssp EECTTSSEEEEEEC-------CCCEEEEEEEECSSSEEEEEEEEES-----SCEEEEECTTCCTTTCCEEEEETTS----
T ss_pred EEcCCCceEEEecCcc-----CCCcEEEEEeCCCCcccceeeeccc-----CcEEEEEEcCCCCCCceEEEecCCC----
Confidence 3589998776553321 0245677777643321111111122 45889999999 68888765543
Q ss_pred eEEEEec--CCc-eeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCc
Q 003363 180 IQFELWS--QSQ-LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ 256 (826)
Q Consensus 180 ~~~~i~~--~~~-~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (826)
.+.+|+ .++ ...... ...+.|..-.+...++||||++.|+..+.+
T Consensus 91 -~i~iwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d---------------------------- 138 (357)
T 3i2n_A 91 -NLHIWNLEAPEMPVYSVK---GHKEIINAIDGIGGLGIGEGAPEIVTGSRD---------------------------- 138 (357)
T ss_dssp -CEEEECTTSCSSCSEEEC---CCSSCEEEEEEESGGGCC-CCCEEEEEETT----------------------------
T ss_pred -eEEEEeCCCCCccEEEEE---ecccceEEEeeccccccCCCccEEEEEeCC----------------------------
Confidence 456662 222 233222 222223111122233689999998876543
Q ss_pred ceeecCCCccCCCccCceEEEEEccCCc--eEeccCCCC--CCccceEE----EeeCCCCCccEEEEEeecCcceeeeee
Q 003363 257 GDWEEDWGETYAGKRQPSLFVININSGE--VQAVKGIPK--SLSVGQVV----WAPLNEGLHQYLVFVGWSSETRKLGIK 328 (826)
Q Consensus 257 ~~~~~d~g~~~~~~~~~~l~v~d~~~g~--~~~l~~~~~--~~~~~~~~----wSPDg~~~~~~lvf~~~~~~~~~~g~~ 328 (826)
..|.+||+.+++ ...+....+ ...+..+. |+||++. |+..+
T Consensus 139 ----------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----l~~~~----------- 187 (357)
T 3i2n_A 139 ----------------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERV----VCAGY----------- 187 (357)
T ss_dssp ----------------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCE----EEEEE-----------
T ss_pred ----------------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCE----EEEEc-----------
Confidence 468889988775 344421122 12444555 7899997 76665
Q ss_pred eeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecC---CCCEEEEEeccCCCCCCCCcccce
Q 003363 329 YCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSP---DGKFLVFLSAKSSVDSGAHSATDS 405 (826)
Q Consensus 329 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~Sp---DG~~l~f~s~~~~~~~g~~~~~~~ 405 (826)
.+..|+.+|+ .+++..........+....|+| +|+.|+..+.+ ..
T Consensus 188 ----~d~~i~i~d~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----------g~ 235 (357)
T 3i2n_A 188 ----DNGDIKLFDL-----------------RNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLE-----------GK 235 (357)
T ss_dssp ----TTSEEEEEET-----------------TTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEEST-----------TE
T ss_pred ----cCCeEEEEEC-----------------ccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCC-----------Ce
Confidence 3347899998 5666655566667788999999 99988876544 45
Q ss_pred EEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCC-------
Q 003363 406 LHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSG------- 478 (826)
Q Consensus 406 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg------- 478 (826)
|++||+.++....... ... ... ....+..+.|+|||+.++++...++...+|.++....
T Consensus 236 i~i~d~~~~~~~~~~~----~~~-~~~---------~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 301 (357)
T 3i2n_A 236 FHVFDMRTQHPTKGFA----SVS-EKA---------HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE 301 (357)
T ss_dssp EEEEEEEEEETTTEEE----EEE-EEC---------CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT
T ss_pred EEEEeCcCCCccccee----eec-cCC---------CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC
Confidence 8888877644321110 000 000 1123456789999986777777777777777663221
Q ss_pred -----------cEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 003363 479 -----------ELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 479 -----------~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
.+..+......+....|+++++.+++..+... .|.+.++.
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~---~i~iw~~~ 352 (357)
T 3i2n_A 302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQ---TVRVLIVT 352 (357)
T ss_dssp SCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTS---EEEEEEEC
T ss_pred CCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCC---cEEEEECC
Confidence 12233334445566678888887765554332 35555543
No 264
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.40 E-value=3.3e-11 Score=127.38 Aligned_cols=274 Identities=14% Similarity=0.168 Sum_probs=163.5
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|||||++|+.....+ .+.+|+ .++..+... +..+.| ..++|+|||+.|+..+.+...
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~---~h~~~v------~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADK-----LIKIWGAYDGKFEKTIS---GHKLGI------SDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEEC---CCSSCE------EEEEECTTSSEEEEEETTSEE
T ss_pred CcEEEEEECCCCCEEEEeeCCC-----eEEEEeCCCcccchhhc---cCCCce------EEEEEcCCCCEEEEECCCCEE
Confidence 3588999999999998876543 466773 344443332 222223 789999999999998876643
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (826)
. .|+............+........|.++....+++.....|.+||+.+++..... ......+..+.|+|||+.
T Consensus 90 ~--vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~--- 163 (312)
T 4ery_A 90 K--IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSL--- 163 (312)
T ss_dssp E--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSE---
T ss_pred E--EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcEEEEEEcCCCCE---
Confidence 3 2332222211222334444445667777555556667789999999988754331 233446778999999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc-eecC-CCCccccCceecCCCCEEEEE
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLT-ESISSAFFPRFSPDGKFLVFL 389 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt-~~~~~~~~p~~SpDG~~l~f~ 389 (826)
|+..+ .+..|..+|+ .+++. ..+. ..........|+|||++|+..
T Consensus 164 -l~~~~---------------~d~~i~~wd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 210 (312)
T 4ery_A 164 -IVSSS---------------YDGLCRIWDT-----------------ASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA 210 (312)
T ss_dssp -EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCSSCCCEEEEEECTTSSEEEEE
T ss_pred -EEEEe---------------CCCcEEEEEC-----------------CCCceeeEEeccCCCceEEEEECCCCCEEEEE
Confidence 76655 2347888998 44432 3333 233456778999999998876
Q ss_pred eccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccc-cCCCEEEEEEEeCCeE
Q 003363 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGSSQ 468 (826)
Q Consensus 390 s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws-~Dg~~l~~~~~~~~~~ 468 (826)
+.+ ..|.+||+.++..... +....... ......|+ ++++.| ++...+ .
T Consensus 211 ~~d-----------~~i~iwd~~~~~~~~~----------~~~~~~~~-------~~~~~~~~~~~~~~l-~sg~~d--g 259 (312)
T 4ery_A 211 TLD-----------NTLKLWDYSKGKCLKT----------YTGHKNEK-------YCIFANFSVTGGKWI-VSGSED--N 259 (312)
T ss_dssp ETT-----------TEEEEEETTTTEEEEE----------ECSSCCSS-------SCCCEEEECSSSCEE-EECCTT--S
T ss_pred cCC-----------CeEEEEECCCCcEEEE----------EEecCCce-------EEEEEEEEeCCCcEE-EEECCC--C
Confidence 644 4689999877543211 00000000 00122344 456544 444333 3
Q ss_pred EEEEEECCCCcEEEecC-CCCCeeeEEEeecCCEEEEEEeCCCC
Q 003363 469 VIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVD 511 (826)
Q Consensus 469 ~l~~vdl~tg~~~~lt~-~~~~~~~~~~s~dg~~l~~~~s~~~~ 511 (826)
.|..+|+.+++...... ....+....+++++..++....+.+.
T Consensus 260 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~ 303 (312)
T 4ery_A 260 LVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDK 303 (312)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTC
T ss_pred EEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCc
Confidence 56667888887665443 33345556788888866655433333
No 265
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.40 E-value=1.8e-11 Score=132.89 Aligned_cols=198 Identities=15% Similarity=0.118 Sum_probs=128.7
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (826)
+||||+.++..... ....+.++++.+. .....+. .. ..+...+|||||++|+..++.. +..
T Consensus 141 fSpDg~~la~as~~-------~d~~i~iwd~~~~-~~~~~~~-~~-----~~V~~v~fspdg~~l~s~s~~~-----~~~ 201 (365)
T 4h5i_A 141 ISREGTVAAIASSK-------VPAIMRIIDPSDL-TEKFEIE-TR-----GEVKDLHFSTDGKVVAYITGSS-----LEV 201 (365)
T ss_dssp ECTTSSCEEEEESC-------SSCEEEEEETTTT-EEEEEEE-CS-----SCCCEEEECTTSSEEEEECSSC-----EEE
T ss_pred EcCCCCEEEEEECC-------CCCEEEEeECCCC-cEEEEeC-CC-----CceEEEEEccCCceEEecccee-----EEE
Confidence 48999998765432 3456777775322 2222222 22 3588999999999999876543 555
Q ss_pred Ee-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecC
Q 003363 184 LW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEED 262 (826)
Q Consensus 184 i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 262 (826)
+| ..+..... .......+ .+..++|||||+.|+..+.+..
T Consensus 202 ~~~~~~~~~~~-~~~~~~~~------~v~~v~fspdg~~l~~~s~d~~-------------------------------- 242 (365)
T 4h5i_A 202 ISTVTGSCIAR-KTDFDKNW------SLSKINFIADDTVLIAASLKKG-------------------------------- 242 (365)
T ss_dssp EETTTCCEEEE-ECCCCTTE------EEEEEEEEETTEEEEEEEESSS--------------------------------
T ss_pred EEeccCcceee-eecCCCCC------CEEEEEEcCCCCEEEEEecCCc--------------------------------
Confidence 55 33332221 11122222 2378999999999998876542
Q ss_pred CCccCCCccCceEEEEEccCCceEecc---CCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEE
Q 003363 263 WGETYAGKRQPSLFVININSGEVQAVK---GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 339 (826)
Q Consensus 263 ~g~~~~~~~~~~l~v~d~~~g~~~~l~---~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~ 339 (826)
....++.|++..+....+. -......+..++|||||+. |+..+ .+..|.+
T Consensus 243 --------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~----lasgs---------------~D~~V~i 295 (365)
T 4h5i_A 243 --------KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGEL----AVLAS---------------NDNSIAL 295 (365)
T ss_dssp --------CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCE----EEEEE---------------TTSCEEE
T ss_pred --------ceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCc----eEEEc---------------CCCEEEE
Confidence 2246778888766543221 0223345778999999997 77766 3347889
Q ss_pred EEcccccchhhhhhhhcCCCCCCcc-ee-cCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCC
Q 003363 340 VRVSLYKSEASELELKESSSEDLPV-VN-LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (826)
Q Consensus 340 ~d~~~~~~~~~~~~~~~~~~~~~~~-~~-Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~ 414 (826)
+|+ .+++. .. +..+...+...+|||||++|+-.+.+ ..|.+||++.+
T Consensus 296 wd~-----------------~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D-----------~tvrvw~ip~~ 344 (365)
T 4h5i_A 296 VKL-----------------KDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAA-----------NTIHIIKLPLN 344 (365)
T ss_dssp EET-----------------TTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETT-----------SEEEEEECCTT
T ss_pred EEC-----------------CCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCC-----------CeEEEEEcCCC
Confidence 998 55554 34 45677889999999999999877765 45888888754
No 266
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.39 E-value=4.7e-12 Score=128.22 Aligned_cols=211 Identities=13% Similarity=0.063 Sum_probs=134.3
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCc--EEEEECCCCCCCC---chhhhh-cCC-------CC-CCc--chHHHH
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY--SLLIVNYRGSLGF---GEEALQ-SLP-------GK-VGS--QDVNDV 655 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~--~Vl~~d~rG~~g~---G~~~~~-~~~-------~~-~~~--~~~~D~ 655 (826)
.+.||++||.... ...|...+..|++.|| .|+.+|.++.+.. |.-... ..| .+ .+. ...+++
T Consensus 6 ~~pvvliHG~~~~--~~~~~~l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~l 83 (249)
T 3fle_A 6 TTATLFLHGYGGS--ERSETFMVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYWI 83 (249)
T ss_dssp CEEEEEECCTTCC--GGGTHHHHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHHH
T ss_pred CCcEEEECCCCCC--hhHHHHHHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHHH
Confidence 4568899996554 6688889999999996 5888887753210 100000 000 00 011 135677
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCC-----ceeEEEecCCccchhhhccCCCCCCchhhhhccCcC
Q 003363 656 LTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 730 (826)
Q Consensus 656 ~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~-----~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (826)
.++++.+.++. +.+++.|+||||||.+++.++.++|+ +++.+|++++..+....... .+.. ..+..
T Consensus 84 ~~~i~~l~~~~--~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~--~~~~---~~~~~-- 154 (249)
T 3fle_A 84 KEVLSQLKSQF--GIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNE--NVNE---IIVDK-- 154 (249)
T ss_dssp HHHHHHHHHTT--CCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSS--CTTT---SCBCT--
T ss_pred HHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccC--Ccch---hhhcc--
Confidence 78888887763 44789999999999999999998873 78899888876543211110 0000 00000
Q ss_pred CccCCCCCC--hhhHHHHhhcCcccccCCCCCcEEEEEeC------CCCCCCcHHHHHHHHHHHhCCCCEEEEEeCC--C
Q 003363 731 KDSFTESPS--VEDLTRFHSKSPISHISKVKTPTIFLLGA------QDLRVPVSNGLQYARALREKGVETKVIVFPN--D 800 (826)
Q Consensus 731 ~~~~~~~~~--~~~~~~~~~~sp~~~~~~i~~PvLii~G~------~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~--~ 800 (826)
.+.|. ......+... ...+.+.++|+|.|+|+ .|..||...++.+...+++.....+.+.+.| +
T Consensus 155 ----~g~p~~~~~~~~~l~~~--~~~~p~~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~~~~y~e~~v~g~~a 228 (249)
T 3fle_A 155 ----QGKPSRMNAAYRQLLSL--YKIYCGKEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGSTKSYQEMKFKGAKA 228 (249)
T ss_dssp ----TCCBSSCCHHHHHTGGG--HHHHTTTTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTCSSEEEEEEEESGGG
T ss_pred ----cCCCcccCHHHHHHHHH--HhhCCccCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhCCCceEEEEEeCCCC
Confidence 11111 1222222222 23345567899999998 6999999999888888877767777777866 8
Q ss_pred CCCCCCCCCHHHHHHHHHHHH
Q 003363 801 VHGIERPQSDFESFLNIGLWF 821 (826)
Q Consensus 801 ~H~~~~~~~~~~~~~~i~~w~ 821 (826)
.|..... +. ++.+.|.+||
T Consensus 229 ~Hs~l~~-n~-~V~~~I~~FL 247 (249)
T 3fle_A 229 QHSQLHE-NK-DVANEIIQFL 247 (249)
T ss_dssp STGGGGG-CH-HHHHHHHHHH
T ss_pred chhcccc-CH-HHHHHHHHHh
Confidence 8987644 33 7888888887
No 267
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.38 E-value=2.9e-11 Score=133.51 Aligned_cols=273 Identities=7% Similarity=0.012 Sum_probs=157.9
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 003363 156 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (826)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~ 235 (826)
.....|+|||++|+.....+ .+.+|+-......... ....+.| ..++|+|||+.|+..+.+.... .
T Consensus 100 ~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~-~~h~~~v------~~~~~~~~~~~l~s~s~d~~i~--i 165 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTEG-----DIKVLDSNFNLQREID-QAHVSEI------TKLKFFPSGEALISSSQDMQLK--I 165 (420)
T ss_dssp EEEEEECSSSCEEEEEETTS-----CEEEECTTSCEEEEET-TSSSSCE------EEEEECTTSSEEEEEETTSEEE--E
T ss_pred eEEEEEecCCCEEEEEECCC-----CEEEEeCCCcceeeec-ccccCcc------EEEEECCCCCEEEEEeCCCeEE--E
Confidence 55668999999999876543 4667742222222221 2232333 7999999999999888766433 3
Q ss_pred ccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCC--C--------------------
Q 003363 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP--K-------------------- 293 (826)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~--~-------------------- 293 (826)
|+............+........|.++....+++..+..|.+||+.+++........ .
T Consensus 166 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 245 (420)
T 3vl1_A 166 WSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEI 245 (420)
T ss_dssp EETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGG
T ss_pred EeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeec
Confidence 333323333333445566667789998655666667788999999988765431010 1
Q ss_pred -CCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecC-CC
Q 003363 294 -SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLT-ES 370 (826)
Q Consensus 294 -~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt-~~ 370 (826)
...+..++|+|||+. |+..+ .+..|.++|+ .++. ...+. .+
T Consensus 246 ~~~~v~~~~~s~~~~~----l~~~~---------------~dg~i~i~d~-----------------~~~~~~~~~~~~~ 289 (420)
T 3vl1_A 246 STSKKNNLEFGTYGKY----VIAGH---------------VSGVITVHNV-----------------FSKEQTIQLPSKF 289 (420)
T ss_dssp CCCCCCTTCSSCTTEE----EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCTT
T ss_pred ccCcccceEEcCCCCE----EEEEc---------------CCCeEEEEEC-----------------CCCceeEEccccc
Confidence 123345667888886 66554 3346889998 3333 33333 34
Q ss_pred CccccCceecCCCC-EEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCC
Q 003363 371 ISSAFFPRFSPDGK-FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN 449 (826)
Q Consensus 371 ~~~~~~p~~SpDG~-~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~ 449 (826)
...+....|+|||+ .|+..+.+ ..|++||+.+++..... +..... .....
T Consensus 290 ~~~v~~~~~~~~~~~~l~~g~~d-----------g~i~vwd~~~~~~~~~~---------~~~~~~---------~~v~~ 340 (420)
T 3vl1_A 290 TCSCNSLTVDGNNANYIYAGYEN-----------GMLAQWDLRSPECPVGE---------FLINEG---------TPINN 340 (420)
T ss_dssp SSCEEEEEECSSCTTEEEEEETT-----------SEEEEEETTCTTSCSEE---------EEESTT---------SCEEE
T ss_pred CCCceeEEEeCCCCCEEEEEeCC-----------CeEEEEEcCCCcCchhh---------hhccCC---------CCceE
Confidence 56688999999999 55544433 46999999876431100 000000 11122
Q ss_pred ccccCCCEEEEEEEeCCeEEEEEEECCC--------CcEEEecCCCCCeeeEEEeecCC---EEEEEEeC
Q 003363 450 PWLSDGCTMLLSSIWGSSQVIISVNVSS--------GELLRITPAESNFSWSLLTLDGD---NIIAVSSS 508 (826)
Q Consensus 450 ~ws~Dg~~l~~~~~~~~~~~l~~vdl~t--------g~~~~lt~~~~~~~~~~~s~dg~---~l~~~~s~ 508 (826)
.+++||+ ++++...++...+|.+.... .....+......+....|++++. .++++.+.
T Consensus 341 ~~~~~~~-~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~ 409 (420)
T 3vl1_A 341 VYFAAGA-LFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKN 409 (420)
T ss_dssp EEEETTE-EEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETT
T ss_pred EEeCCCC-EEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCC
Confidence 3556776 44554444555555443210 22223333334455567888887 67766653
No 268
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.38 E-value=2.4e-11 Score=130.56 Aligned_cols=199 Identities=15% Similarity=0.149 Sum_probs=128.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|||||++|+..+..+ .+.+|+ .++..+.. .+..+.| ..+.|+||++.++..+..
T Consensus 128 ~~V~~v~~spdg~~l~sgs~d~-----~i~iwd~~~~~~~~~~---~~h~~~V------~~~~~~~~~~~~l~s~s~--- 190 (344)
T 4gqb_B 128 DIVSTVSVLSSGTQAVSGSKDI-----CIKVWDLAQQVVLSSY---RAHAAQV------TCVAASPHKDSVFLSCSE--- 190 (344)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEE---CCCSSCE------EEEEECSSCTTEEEEEET---
T ss_pred CCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCcEEEEE---cCcCCce------EEEEecCCCCCceeeecc---
Confidence 3588999999999999876543 467773 33333322 2233333 789999999866544322
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEe-ccCCCCCCccceEEEeeCCCCCc
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLH 310 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~-l~~~~~~~~~~~~~wSPDg~~~~ 310 (826)
+..|.+||+.+++... +........+..++|+|++..
T Consensus 191 ----------------------------------------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-- 228 (344)
T 4gqb_B 191 ----------------------------------------DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSE-- 228 (344)
T ss_dssp ----------------------------------------TSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTT--
T ss_pred ----------------------------------------ccccccccccccceeeeeecceeeccceeeeecCCCCc--
Confidence 2568999998887544 321222335678999998877
Q ss_pred cEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCE-EEEE
Q 003363 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKF-LVFL 389 (826)
Q Consensus 311 ~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~-l~f~ 389 (826)
++.++. .+..|.++|+. .+.....+..+...+...+|||||.. |+..
T Consensus 229 --~l~sg~--------------~dg~v~~wd~~----------------~~~~~~~~~~h~~~v~~v~fsp~g~~~lasg 276 (344)
T 4gqb_B 229 --VFVFGD--------------ENGTVSLVDTK----------------STSCVLSSAVHSQCVTGLVFSPHSVPFLASL 276 (344)
T ss_dssp --EEEEEE--------------TTSEEEEEESC----------------C--CCEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred --ceEEec--------------cCCcEEEEECC----------------CCcEEEEEcCCCCCEEEEEEccCCCeEEEEE
Confidence 666552 23478889982 23345667777778889999999965 5444
Q ss_pred eccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEE
Q 003363 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 469 (826)
Q Consensus 390 s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~ 469 (826)
+.+ ..|++||+.+++...+. + +...+..++|+|||+.|+++...++...
T Consensus 277 s~D-----------~~i~vwd~~~~~~~~~~-~-------------------H~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 277 SED-----------CSLAVLDSSLSELFRSQ-A-------------------HRDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp ETT-----------SCEEEECTTCCEEEEEC-C-------------------CSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred eCC-----------CeEEEEECCCCcEEEEc-C-------------------CCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 433 35889998775432111 0 1124557889999998877777777666
Q ss_pred EEEEE
Q 003363 470 IISVN 474 (826)
Q Consensus 470 l~~vd 474 (826)
+|.++
T Consensus 326 ~w~v~ 330 (344)
T 4gqb_B 326 HHVVP 330 (344)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66553
No 269
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.38 E-value=2e-11 Score=131.34 Aligned_cols=303 Identities=11% Similarity=0.015 Sum_probs=163.9
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003363 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (826)
Q Consensus 102 ~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (826)
-.+||||+.++... .+..+.++++.+...........+ ....+...+|||||++||..+..+ .
T Consensus 22 l~~sp~g~~las~~---------~D~~i~iw~~~~~~~~~~~~~~~~---h~~~v~~~~~sp~g~~l~s~s~D~-----~ 84 (345)
T 3fm0_A 22 LAWNPAGTLLASCG---------GDRRIRIWGTEGDSWICKSVLSEG---HQRTVRKVAWSPCGNYLASASFDA-----T 84 (345)
T ss_dssp EEECTTSSCEEEEE---------TTSCEEEEEEETTEEEEEEEECSS---CSSCEEEEEECTTSSEEEEEETTS-----C
T ss_pred EEECCCCCEEEEEc---------CCCeEEEEEcCCCcceeeeeeccc---cCCcEEEEEECCCCCEEEEEECCC-----c
Confidence 34589999887542 233455555533211011111111 114588999999999999876543 3
Q ss_pred EEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCC---CCCCccCCCCCCc
Q 003363 182 FELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKG---GSSDKDCNSWKGQ 256 (826)
Q Consensus 182 ~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 256 (826)
..+|+ .+....+..+ .+..+.| ..++|+|||+.|+..+.+.... .|+...... ......+......
T Consensus 85 v~iw~~~~~~~~~~~~~-~~h~~~v------~~v~~sp~~~~l~s~s~D~~v~--iwd~~~~~~~~~~~~~~~h~~~v~~ 155 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTL-EGHENEV------KSVAWAPSGNLLATCSRDKSVW--VWEVDEEDEYECVSVLNSHTQDVKH 155 (345)
T ss_dssp EEEEEECCC-EEEEEEE-CCCSSCE------EEEEECTTSSEEEEEETTSCEE--EEEECTTSCEEEEEEECCCCSCEEE
T ss_pred EEEEEccCCCeEEEEEc-cCCCCCc------eEEEEeCCCCEEEEEECCCeEE--EEECCCCCCeEEEEEecCcCCCeEE
Confidence 55662 2222222222 2233333 7999999999999988776543 233211111 1112234444556
Q ss_pred ceeecCCCccCCCccCceEEEEEccCCceE---eccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccC
Q 003363 257 GDWEEDWGETYAGKRQPSLFVININSGEVQ---AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNR 333 (826)
Q Consensus 257 ~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~---~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~ 333 (826)
..|.++....+++..+..|.+||..+++.. .+ ......+..++|+|||+. |+..+.
T Consensus 156 ~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~--~~h~~~v~~l~~sp~g~~----l~s~s~--------------- 214 (345)
T 3fm0_A 156 VVWHPSQELLASASYDDTVKLYREEEDDWVCCATL--EGHESTVWSLAFDPSGQR----LASCSD--------------- 214 (345)
T ss_dssp EEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEE--CCCSSCEEEEEECTTSSE----EEEEET---------------
T ss_pred EEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEe--cCCCCceEEEEECCCCCE----EEEEeC---------------
Confidence 778888555556666788999999887643 33 233456789999999997 777662
Q ss_pred CCceEEEEcccccchhhhhhhhcCCCCC-CcceecCC-CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeC
Q 003363 334 PCALYAVRVSLYKSEASELELKESSSED-LPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 411 (826)
Q Consensus 334 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~Lt~-~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~ 411 (826)
+..|.++|............ ...... .....+.. +...+...+|+|+|..|+..+.+. .|.+|++
T Consensus 215 D~~v~iW~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~-----------~i~vw~~ 281 (345)
T 3fm0_A 215 DRTVRIWRQYLPGNEQGVAC--SGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDD-----------AIRVFQE 281 (345)
T ss_dssp TSCEEEEEEECTTCTTCCCC--C---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTS-----------CEEEEEE
T ss_pred CCeEEEeccccCCCCcccee--eccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCC-----------eEEEEEe
Confidence 22455555311000000000 000000 00112222 445677899999999988777552 3677776
Q ss_pred CCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEE
Q 003363 412 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 474 (826)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vd 474 (826)
.++......... ...... . .+...+..++|+|++..++++...++...+|.+.
T Consensus 282 ~~~~~~~~~~~~-~~~~~~-~--------~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 282 DPNSDPQQPTFS-LTAHLH-Q--------AHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp CTTSCTTSCCEE-EEEEET-T--------SSSSCEEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred CCCCCcceeeEE-EEeeec-c--------cccCcEeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence 654321111000 000000 0 0122455788999986566777777777777654
No 270
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.38 E-value=8.5e-12 Score=131.04 Aligned_cols=216 Identities=16% Similarity=0.128 Sum_probs=133.0
Q ss_pred CeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECC--------CCCCCCchhhhhcC-
Q 003363 573 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNY--------RGSLGFGEEALQSL- 643 (826)
Q Consensus 573 g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~--------rG~~g~G~~~~~~~- 643 (826)
...+.+.+|+|++ .++.|+||.+||+... ..+||+++.+|+ +|+.|+|. +....
T Consensus 122 s~sf~~~i~lP~g---~~P~Pvii~~~~~~~~-------------~~~G~A~i~f~~~~va~d~~~gsrG~g~-f~~ly~ 184 (433)
T 4g4g_A 122 SISFSASIRKPSG---AGPFPAIIGIGGASIP-------------IPSNVATITFNNDEFGAQMGSGSRGQGK-FYDLFG 184 (433)
T ss_dssp EEEEEEEEECCSS---SCCEEEEEEESCCCSC-------------CCTTSEEEEECHHHHSCCSSGGGTTCSH-HHHHHC
T ss_pred eEEEEEEEECCCC---CCCccEEEEECCCccc-------------cCCCeEEEEeCCcccccccCCCcCCccc-cccccC
Confidence 3557999999974 6889999999974211 357999999997 44555665 33221
Q ss_pred -CCCCCcch--HHHHHHHHHHHHH----cCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCccchhhhc----
Q 003363 644 -PGKVGSQD--VNDVLTAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLCNLALMV---- 712 (826)
Q Consensus 644 -~~~~~~~~--~~D~~~~i~~l~~----~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~~~~~~~---- 712 (826)
...++... .-++..++++|.. ++.+|++||+++|||+||..++++++.. ++|+++|..++.++-....
T Consensus 185 ~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~~G~~~~R~~~ 263 (433)
T 4g4g_A 185 RDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGAGGAACWRISD 263 (433)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCTTTTSCHHHHH
T ss_pred CccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCCCchhhhhhch
Confidence 12344333 3589999999999 7889999999999999999999999975 5899999988754321110
Q ss_pred -----cCC--------CCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCcccc---cCCC-CCcEEEEEeCCCCCCCc
Q 003363 713 -----GTT--------DIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISH---ISKV-KTPTIFLLGAQDLRVPV 775 (826)
Q Consensus 713 -----~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~---~~~i-~~PvLii~G~~D~~vp~ 775 (826)
+.. ....|+ ...+ ..|... ...-|..+ +.-+ ..|+|++.| +|..+++
T Consensus 264 ~~~~~Ge~v~~~~~~~ge~~Wf-~~~f-----~~y~~~---------~~~LPfD~heL~ALiAPRPlLv~~g-~D~w~~p 327 (433)
T 4g4g_A 264 QQKAAGANIQTAAQIITENPWF-SRNF-----DPHVNS---------ITSVPQDHHLLAALIVPRGLAVFEN-NIDWLGP 327 (433)
T ss_dssp HHHHTTCCCCCHHHHTTTCCCS-CTTT-----GGGTTC---------GGGSSCCGGGHHHHHTTSEEEEEEC-CCTTTCH
T ss_pred hhcccCcchhhhhcccCCcccc-chhh-----Hhhccc---------cccCCcCHHHHHHhhCCceEEEecC-CCCcCCc
Confidence 000 000111 0000 000000 00011111 1111 257999999 9988888
Q ss_pred HHHHHHHHHHH----hCCC--CEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 776 SNGLQYARALR----EKGV--ETKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 776 ~~~~~~~~~l~----~~g~--~~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
......+.+++ ..|. .+.+.+.++.+|+.. +. +....+.+||+++|+
T Consensus 328 ~g~~~a~~aa~~VY~~lGa~d~l~~~~~ggH~Hc~f-p~---~~r~~~~~F~~k~Lk 380 (433)
T 4g4g_A 328 VSTTGCMAAGRLIYKAYGVPNNMGFSLVGGHNHCQF-PS---SQNQDLNSYINYFLL 380 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTCGGGEEEEECCSSCTTCC-CG---GGHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHcCCccceEEEeeCCCCcccC-CH---HHHHHHHHHHHHHhC
Confidence 76554444332 2243 567766545456432 22 234788899999985
No 271
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.38 E-value=2.8e-11 Score=130.66 Aligned_cols=269 Identities=13% Similarity=0.086 Sum_probs=164.8
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|||||++||..+.++ .+.+|+ .+.......... . ++..++|||||+.||..+.+...
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg-----~v~vWd~~~~~~~~~~~~~~---~------~v~~~~~sp~g~~lasg~~d~~i 130 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDG-----KVIVWDSFTTNKEHAVTMPC---T------WVMACAYAPSGCAIACGGLDNKC 130 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTCCEEEEEECSS---S------CCCEEEECTTSSEEEEESTTSEE
T ss_pred CeEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCCcceEEecCC---C------CEEEEEECCCCCEEEEeeCCCCE
Confidence 4588999999999998876554 677884 333333332211 1 23789999999999987765533
Q ss_pred CCCCccCCCCC------CCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeC
Q 003363 232 SKPTFSLGSTK------GGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 305 (826)
Q Consensus 232 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPD 305 (826)
.. |...... .......+........|.++....+++..+..|.+||+.+++..... ......+..+.|+|+
T Consensus 131 ~v--~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~-~~h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 131 SV--YPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSF-HGHGADVLCLDLAPS 207 (354)
T ss_dssp EE--EECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECCC
T ss_pred EE--EEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEE-cCCCCCeEEEEEEeC
Confidence 21 1111110 01111224444455677877556667777889999999988765431 223335567778774
Q ss_pred --CCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCC
Q 003363 306 --NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPD 382 (826)
Q Consensus 306 --g~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpD 382 (826)
|+. |+..+ .+..|.++|+ .+++ ...+..+...+....|+||
T Consensus 208 ~~g~~----l~sgs---------------~Dg~v~~wd~-----------------~~~~~~~~~~~h~~~v~~v~~~p~ 251 (354)
T 2pbi_B 208 ETGNT----FVSGG---------------CDKKAMVWDM-----------------RSGQCVQAFETHESDVNSVRYYPS 251 (354)
T ss_dssp SSCCE----EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECTT
T ss_pred CCCCE----EEEEe---------------CCCeEEEEEC-----------------CCCcEEEEecCCCCCeEEEEEeCC
Confidence 555 55544 3347889998 4444 4455666777889999999
Q ss_pred CCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEE
Q 003363 383 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSS 462 (826)
Q Consensus 383 G~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~ 462 (826)
|+.|+..+.+ ..|.+||+.++.... .... .. ....+..+.|+|||+.|+ +.
T Consensus 252 ~~~l~s~s~D-----------~~v~lwd~~~~~~~~----------~~~~--~~-----~~~~~~~~~~s~~g~~l~-~g 302 (354)
T 2pbi_B 252 GDAFASGSDD-----------ATCRLYDLRADREVA----------IYSK--ES-----IIFGASSVDFSLSGRLLF-AG 302 (354)
T ss_dssp SSEEEEEETT-----------SCEEEEETTTTEEEE----------EECC--TT-----CCSCEEEEEECTTSSEEE-EE
T ss_pred CCEEEEEeCC-----------CeEEEEECCCCcEEE----------EEcC--CC-----cccceeEEEEeCCCCEEE-EE
Confidence 9988866654 358889987643211 0100 00 001233568999998654 44
Q ss_pred EeCCeEEEEEEECCCCcEEE-ecCCCCCeeeEEEeecCCEEEEEE
Q 003363 463 IWGSSQVIISVNVSSGELLR-ITPAESNFSWSLLTLDGDNIIAVS 506 (826)
Q Consensus 463 ~~~~~~~l~~vdl~tg~~~~-lt~~~~~~~~~~~s~dg~~l~~~~ 506 (826)
..++. +..+|+.+++... +......+....|+++++.|+...
T Consensus 303 ~~d~~--i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 303 YNDYT--INVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp ETTSC--EEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred ECCCc--EEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEc
Confidence 44444 5555777776544 444444566678899988665444
No 272
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.37 E-value=2.7e-11 Score=129.99 Aligned_cols=271 Identities=8% Similarity=0.020 Sum_probs=159.0
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (826)
++|||+.++-. .....+.++++.+. .....+.... ..+...+|||||++|+.....+ ...
T Consensus 63 ~s~d~~~l~s~---------s~Dg~v~iWd~~~~-~~~~~~~~~~-----~~v~~~~~s~~~~~l~s~~~d~-----~v~ 122 (340)
T 1got_B 63 WGTDSRLLLSA---------SQDGKLIIWDSYTT-NKVHAIPLRS-----SWVMTCAYAPSGNYVACGGLDN-----ICS 122 (340)
T ss_dssp ECTTSSEEEEE---------ETTTEEEEEETTTC-CEEEEEECSS-----SCEEEEEECTTSSEEEEEETTC-----EEE
T ss_pred ECCCCCEEEEE---------eCCCcEEEEECCCC-CcceEeecCC-----ccEEEEEECCCCCEEEEEeCCC-----eEE
Confidence 47888766432 23446667665322 2222222222 4578899999999998876543 556
Q ss_pred Eec--CC-ceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceee
Q 003363 184 LWS--QS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (826)
Q Consensus 184 i~~--~~-~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (826)
+|+ .+ ...+......+..+.| ..+.|+||++ |+..+.+.... .|+............+........|.
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v------~~~~~~~~~~-l~s~s~d~~i~--~wd~~~~~~~~~~~~h~~~v~~~~~~ 193 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYL------SCCRFLDDNQ-IVTSSGDTTCA--LWDIETGQQTTTFTGHTGDVMSLSLA 193 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCE------EEEEEEETTE-EEEEETTSCEE--EEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EEECccCCCcceeEEEecCCCccE------EEEEECCCCc-EEEEECCCcEE--EEECCCCcEEEEEcCCCCceEEEEEC
Confidence 662 11 1112221112222333 7889999986 66666655433 33322222222223344455567788
Q ss_pred cCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEE
Q 003363 261 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (826)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (826)
++....+++..+..|.+||+.+++..... ......+..++|+|||+. |+..+ .+..|.++
T Consensus 194 ~~~~~l~sg~~d~~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~p~~~~----l~s~s---------------~d~~v~iw 253 (340)
T 1got_B 194 PDTRLFVSGACDASAKLWDVREGMCRQTF-TGHESDINAICFFPNGNA----FATGS---------------DDATCRLF 253 (340)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCSEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCeeEEEE-cCCcCCEEEEEEcCCCCE----EEEEc---------------CCCcEEEE
Confidence 87544556667789999999888755431 334456788999999997 76665 33468888
Q ss_pred EcccccchhhhhhhhcCCCCCCcc-eecCCC--CccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCC
Q 003363 341 RVSLYKSEASELELKESSSEDLPV-VNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF 417 (826)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt~~--~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~ 417 (826)
|+ ..++. ..+... ...+....|||||+.|+..+.+ ..|.+||+.++...
T Consensus 254 d~-----------------~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----------~~i~vwd~~~~~~~ 305 (340)
T 1got_B 254 DL-----------------RADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-----------FNCNVWDALKADRA 305 (340)
T ss_dssp ET-----------------TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----------SEEEEEETTTCCEE
T ss_pred EC-----------------CCCcEEEEEccCCcccceEEEEECCCCCEEEEECCC-----------CeEEEEEcccCcEe
Confidence 87 33332 222221 2346788999999988766544 46899998765432
Q ss_pred CcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEE
Q 003363 418 SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 471 (826)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~ 471 (826)
....+ +...+..+.|+|||+.| ++...++...||
T Consensus 306 ~~~~~-------------------h~~~v~~~~~s~dg~~l-~s~s~D~~i~iW 339 (340)
T 1got_B 306 GVLAG-------------------HDNRVSCLGVTDDGMAV-ATGSWDSFLKIW 339 (340)
T ss_dssp EEEEC-------------------CSSCEEEEEECTTSSCE-EEEETTSCEEEE
T ss_pred eEeec-------------------CCCcEEEEEEcCCCCEE-EEEcCCccEEec
Confidence 11100 11234467899999855 455556666665
No 273
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=99.36 E-value=2.3e-12 Score=136.76 Aligned_cols=215 Identities=12% Similarity=0.041 Sum_probs=124.6
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHH-HHHHHcCC
Q 003363 589 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAI-DHVIDMGL 667 (826)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i-~~l~~~~~ 667 (826)
.+..|.||++||.........|...+..| ..||.|+++|+||. |.+. .....++++.+.+ +.+.+.
T Consensus 78 ~~~~~~lv~lhG~~~~~~~~~~~~~~~~L-~~~~~v~~~d~~G~---G~~~-------~~~~~~~~~~~~~~~~l~~~-- 144 (319)
T 3lcr_A 78 GQLGPQLILVCPTVMTTGPQVYSRLAEEL-DAGRRVSALVPPGF---HGGQ-------ALPATLTVLVRSLADVVQAE-- 144 (319)
T ss_dssp CCSSCEEEEECCSSTTCSGGGGHHHHHHH-CTTSEEEEEECTTS---STTC-------CEESSHHHHHHHHHHHHHHH--
T ss_pred CCCCCeEEEECCCCcCCCHHHHHHHHHHh-CCCceEEEeeCCCC---CCCC-------CCCCCHHHHHHHHHHHHHHh--
Confidence 34568899999942222355788888888 78999999999994 4321 0111233333322 233222
Q ss_pred CCCCcEEEEEecchHHHHHHHHHhC---CCceeEEEecCCccchhhhccCCCCCCch--hhhhccCcCCccCCCCCC-hh
Q 003363 668 ANPSKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCNLALMVGTTDIPDWC--YVESYGSKGKDSFTESPS-VE 741 (826)
Q Consensus 668 ~d~~rv~l~G~S~GG~~a~~~a~~~---p~~~~a~v~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~ 741 (826)
.+.+++.|+|||+||.++..++.++ |+.++++|+.++....... .....+. ........ ...+..... ..
T Consensus 145 ~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 220 (319)
T 3lcr_A 145 VADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDG---GRPEELFRSALNERFVE-YLRLTGGGNLSQ 220 (319)
T ss_dssp HTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSC---CHHHHHHHHHHHHHHHH-HHHHHCCCCHHH
T ss_pred cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccc---hhhHHHHHHHHHHHHhh-hhcccCCCchhH
Confidence 1236899999999999999999887 8889999988764321100 0000000 00000000 000000000 01
Q ss_pred h---HHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 003363 742 D---LTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDFESFLNIG 818 (826)
Q Consensus 742 ~---~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~ 818 (826)
. ...+...........+++|+|+++|++ ..+++.....+.+.+.. ..+++++++..|.+..++...++...|.
T Consensus 221 ~l~~~~~~~~~~~~~~~~~i~~PvLli~g~~-~~~~~~~~~~~~~~~~~---~~~~~~~~g~H~~~~~~~~~~~va~~i~ 296 (319)
T 3lcr_A 221 RITAQVWCLELLRGWRPEGLTAPTLYVRPAQ-PLVEQEKPEWRGDVLAA---MGQVVEAPGDHFTIIEGEHVASTAHIVG 296 (319)
T ss_dssp HHHHHHHHHHHTTTCCCCCCSSCEEEEEESS-CSSSCCCTHHHHHHHHT---CSEEEEESSCTTGGGSTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcCCCEEEEEeCC-CCCCcccchhhhhcCCC---CceEEEeCCCcHHhhCcccHHHHHHHHH
Confidence 1 111111111112257899999999998 56666666777776654 3678888875555554466778999999
Q ss_pred HHHHHH
Q 003363 819 LWFKKY 824 (826)
Q Consensus 819 ~w~~~~ 824 (826)
+||.+.
T Consensus 297 ~fL~~~ 302 (319)
T 3lcr_A 297 DWLREA 302 (319)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999874
No 274
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.36 E-value=1.1e-12 Score=137.25 Aligned_cols=149 Identities=14% Similarity=0.105 Sum_probs=100.3
Q ss_pred CCCCCCcEEEEEecchHHHHHHHHHhCCCcee-EEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHH
Q 003363 666 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFV-AAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT 744 (826)
Q Consensus 666 ~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~-a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (826)
..+|++||+|+|+|+||++++.++..+|++|+ ++++.++...... .+.. ....+.. .+...+..+...
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~----~~~~---~~~~~~~----~~~~~~~~~~~~ 74 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCA----RNQY---YTSCMYN----GYPSITTPTANM 74 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTT----SSSC---GGGGSTT----CCCCCHHHHHHH
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEeccccccc----chHH---HHHHhhc----cCCCCCCHHHHH
Confidence 34899999999999999999999999999998 8776665321100 0000 0000000 000011112222
Q ss_pred HHhhcCcccccCCCC-CcEEEEEeCCCCCCCcHHHHHHHHHHHhCCC--CEEEEEeCCCCCCCCCCCC------------
Q 003363 745 RFHSKSPISHISKVK-TPTIFLLGAQDLRVPVSNGLQYARALREKGV--ETKVIVFPNDVHGIERPQS------------ 809 (826)
Q Consensus 745 ~~~~~sp~~~~~~i~-~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~--~~~~~~~p~~~H~~~~~~~------------ 809 (826)
.....+++..+.+++ +|+||+||++|.+||++++++++++|++.+. +++++.+++++|.+.....
T Consensus 75 ~~~~~~~i~~~~~l~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~g~~~~ve~~~~~g~gH~~~~~~~~~~~~~c~~~~~ 154 (318)
T 2d81_A 75 KSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANVSYVTTTGAVHTFPTDFNGAGDNSCSLSTS 154 (318)
T ss_dssp HHHBTTTBCCGGGGGGCEEEEEEETTCCSSCHHHHHHHHHHHTTTSCGGGEEEEEETTCCSSEEESSCCTTCCCTTSCCT
T ss_pred HHhhcccCChhHcCCCCcEEEEeCCCCCCcCHHHHHHHHHHHHhcCCCcceEEEEeCCCCCCCccCCcccCccccccCCC
Confidence 222224555555554 6899999999999999999999999998883 7999999999998653322
Q ss_pred ------HHHHHHHHHHHHHHHc
Q 003363 810 ------DFESFLNIGLWFKKYC 825 (826)
Q Consensus 810 ------~~~~~~~i~~w~~~~l 825 (826)
..+...+|++||...|
T Consensus 155 pyi~~~~~d~~~~i~~ff~g~~ 176 (318)
T 2d81_A 155 PYISNCNYDGAGAALKWIYGSL 176 (318)
T ss_dssp TCEEECSSCHHHHHHHHHHSSC
T ss_pred CcccCCCChHHHHHHHHHhccC
Confidence 2567788999996543
No 275
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.35 E-value=5.6e-11 Score=125.32 Aligned_cols=263 Identities=11% Similarity=0.053 Sum_probs=158.8
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|||||+.|+.....+ .+.+|+ .+...+..... .+.| ..+.|+||++.|+..+.+...
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg-----~v~lWd~~~~~~~~~~~~~---~~~v------~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSG-----RVELWNYETQVEVRSIQVT---ETPV------RAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEECC---SSCE------EEEEEEGGGTEEEEEETTSEE
T ss_pred CceEEEEECCCCCEEEEEcCCC-----cEEEEECCCCceeEEeecc---CCcE------EEEEEeCCCCEEEEECCCCEE
Confidence 4588999999999999876543 577884 33333333221 1222 788999999999998877654
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCc-eEeccCCCCCCccceEEEeeC-CCCC
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE-VQAVKGIPKSLSVGQVVWAPL-NEGL 309 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~-~~~l~~~~~~~~~~~~~wSPD-g~~~ 309 (826)
+ .|+............+........|.++....+++..+..|.+||+.++. ..... ......+..++|+|+ ++.
T Consensus 80 ~--vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~- 155 (304)
T 2ynn_A 80 R--VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF-EGHEHFVMCVAFNPKDPST- 155 (304)
T ss_dssp E--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE-CCCCSCEEEEEECTTCTTE-
T ss_pred E--EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh-cccCCcEEEEEECCCCCCE-
Confidence 3 33332222223334556666677888885555667778899999998773 33321 233446788999995 554
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecC-CCCccccCceecC--CCCEE
Q 003363 310 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSP--DGKFL 386 (826)
Q Consensus 310 ~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~Sp--DG~~l 386 (826)
|+..+ .+..|.++|+. .......+. .+...+....|+| |+++|
T Consensus 156 ---l~sgs---------------~D~~v~iwd~~----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (304)
T 2ynn_A 156 ---FASGC---------------LDRTVKVWSLG----------------QSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (304)
T ss_dssp ---EEEEE---------------TTSEEEEEETT----------------CSSCSEEEECCCTTCEEEEEECCSTTCCEE
T ss_pred ---EEEEe---------------CCCeEEEEECC----------------CCCccceeccCCcCcEEEEEEEEcCCCCEE
Confidence 44444 33478888872 222223333 2334455667765 77887
Q ss_pred EEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCC
Q 003363 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (826)
Q Consensus 387 ~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (826)
+..+.+ ..|.+||+.++.......+ +...+..+.|+|+++.| ++...++
T Consensus 202 ~s~s~D-----------~~i~iWd~~~~~~~~~~~~-------------------h~~~v~~~~~~p~~~~l-~s~s~Dg 250 (304)
T 2ynn_A 202 ITASDD-----------LTIKIWDYQTKSCVATLEG-------------------HMSNVSFAVFHPTLPII-ISGSEDG 250 (304)
T ss_dssp EEEETT-----------SEEEEEETTTTEEEEEEEC-------------------CSSCEEEEEECSSSSEE-EEEETTS
T ss_pred EEEcCC-----------CeEEEEeCCCCccceeeCC-------------------CCCCEEEEEECCCCCEE-EEEcCCC
Confidence 766544 4689999877543211100 11133467899999854 5555555
Q ss_pred eEEEEEEECCCCcEEEecCC-CCCeeeEEEeecCCE
Q 003363 467 SQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDN 501 (826)
Q Consensus 467 ~~~l~~vdl~tg~~~~lt~~-~~~~~~~~~s~dg~~ 501 (826)
.. ..+|+.+++..+.... ........++++++.
T Consensus 251 ~i--~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 251 TL--KIWNSSTYKVEKTLNVGLERSWCIATHPTGRK 284 (304)
T ss_dssp CE--EEEETTTCCEEEEECCSSSSEEEEEECTTCGG
T ss_pred eE--EEEECCCCceeeeccCCCccEEEEEECCCCCc
Confidence 54 4558888876654433 233334456676654
No 276
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.35 E-value=6e-11 Score=129.40 Aligned_cols=290 Identities=10% Similarity=0.050 Sum_probs=169.4
Q ss_pred cccEEEEeCCCC-CeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecC-CCCeEEEEeecC
Q 003363 154 TGASAVVPSPSG-SKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEP 229 (826)
Q Consensus 154 ~~~~~~~~SPdG-~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSP-Dg~~ia~~~~~~ 229 (826)
..+...+|+||| +.|+.....+ .+.+| ..++....... .+..+.| ..+.|+| |++.|+..+.+.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~-~~h~~~v------~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGG-----DIILWDYDVQNKTSFIQG-MGPGDAI------TGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTS-----CEEEEETTSTTCEEEECC-CSTTCBE------EEEEEETTEEEEEEEEETTT
T ss_pred CCEEEEEECCCCCCEEEEEcCCC-----eEEEEeCCCcccceeeec-CCcCCce------eEEEeCCCCCCEEEEEeCCC
Confidence 358889999999 7777765543 45666 23344444332 1232333 7999999 678887777665
Q ss_pred CCCCCCccCCCCCCCCCC---ccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCC
Q 003363 230 SPSKPTFSLGSTKGGSSD---KDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLN 306 (826)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg 306 (826)
... .|+... ...... ..+..+.....|.++....+++.....|++||+.+..+..+ ......+..++|+|++
T Consensus 142 ~i~--iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~h~~~v~~~~~~~~~ 216 (383)
T 3ei3_B 142 ATT--LRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKE--KLHKAKVTHAEFNPRC 216 (383)
T ss_dssp EEE--EEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEE--ECSSSCEEEEEECSSC
T ss_pred EEE--EEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEe--ccCCCcEEEEEECCCC
Confidence 433 232211 111111 11224445677888865566666778999999976666666 3444567899999999
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecC-CCCE
Q 003363 307 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSP-DGKF 385 (826)
Q Consensus 307 ~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~Sp-DG~~ 385 (826)
+. +++++. .+..|.++|+.... ..+.......+...+....|+| ||++
T Consensus 217 ~~----~l~s~~--------------~d~~i~iwd~~~~~-------------~~~~~~~~~~~~~~v~~~~~s~~~~~~ 265 (383)
T 3ei3_B 217 DW----LMATSS--------------VDATVKLWDLRNIK-------------DKNSYIAEMPHEKPVNAAYFNPTDSTK 265 (383)
T ss_dssp TT----EEEEEE--------------TTSEEEEEEGGGCC-------------STTCEEEEEECSSCEEEEEECTTTSCE
T ss_pred CC----EEEEEe--------------CCCEEEEEeCCCCC-------------cccceEEEecCCCceEEEEEcCCCCCE
Confidence 96 655552 33478889983100 1133333335667788999999 9999
Q ss_pred EEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEE--
Q 003363 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI-- 463 (826)
Q Consensus 386 l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~-- 463 (826)
|+..+.+ ..|.+||+.++........... ..+. + .......|+|++..+.+...
T Consensus 266 l~~~~~d-----------~~i~iwd~~~~~~~~~~~~~~~----------~~~~--~-~~~~~~~~~p~~~~~~~~~s~d 321 (383)
T 3ei3_B 266 LLTTDQR-----------NEIRVYSSYDWSKPDQIIIHPH----------RQFQ--H-LTPIKATWHPMYDLIVAGRYPD 321 (383)
T ss_dssp EEEEESS-----------SEEEEEETTBTTSCSEEEECCB----------CCCT--T-SCCCCCEECSSSSEEEEECBCC
T ss_pred EEEEcCC-----------CcEEEEECCCCccccccccccc----------cccc--c-ccceEEeccCCCCceEEEecCC
Confidence 8876644 4699999987665321111100 0000 0 01112356666554433321
Q ss_pred ----eCCeEEEEEEECCCCcEEEecCC---CCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 003363 464 ----WGSSQVIISVNVSSGELLRITPA---ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 520 (826)
Q Consensus 464 ----~~~~~~l~~vdl~tg~~~~lt~~---~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~ 520 (826)
...+..|..+|+.+++....... ...+....|++++..|+.. + + ..|.+.++
T Consensus 322 g~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~-s--d--~~i~iw~~ 380 (383)
T 3ei3_B 322 DQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG-M--G--FNILIWNR 380 (383)
T ss_dssp TTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE-E--T--TEEEEEEC
T ss_pred cccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe-c--C--CcEEEEec
Confidence 12345677789888876544332 2234444789999866555 3 2 34666554
No 277
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.35 E-value=6.8e-11 Score=130.48 Aligned_cols=266 Identities=12% Similarity=0.073 Sum_probs=167.1
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|+|+|+.|+..+..+ .+.+|+ .++..+... +..+.| ..++|+|||+.|+..+.+...
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg-----~i~vwd~~~~~~~~~l~---~h~~~V------~~v~~~~~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDA-----TIKVWDYETGDFERTLK---GHTDSV------QDISFDHSGKLLASCSADMTI 174 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSS-----CEEEEETTTCCCCEEEC---CCSSCE------EEEEECTTSSEEEEEETTSCC
T ss_pred CcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEe---ccCCcE------EEEEEcCCCCEEEEEeCCCeE
Confidence 4588999999999998876543 466773 444444332 222333 789999999999998887765
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (826)
. .|+............+...+....|.++....+++..+..|.+||+.+++..... ......+..+.|+|||+.
T Consensus 175 ~--iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~g~~--- 248 (410)
T 1vyh_C 175 K--LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRMVRPNQDGTL--- 248 (410)
T ss_dssp C--EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECTTSSE---
T ss_pred E--EEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE-eCCCccEEEEEECCCCCE---
Confidence 5 3332222222233344455556778888555566777899999999988754321 233345678899999996
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCC--------
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPD-------- 382 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpD-------- 382 (826)
|+..+ .+..|.++|+ .+++ ...+..+...+....|+|+
T Consensus 249 -l~s~s---------------~D~~v~vwd~-----------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 295 (410)
T 1vyh_C 249 -IASCS---------------NDQTVRVWVV-----------------ATKECKAELREHRHVVECISWAPESSYSSISE 295 (410)
T ss_dssp -EEEEE---------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECCSCGGGGGGG
T ss_pred -EEEEc---------------CCCeEEEEEC-----------------CCCceeeEecCCCceEEEEEEcCcccccchhh
Confidence 66655 3346888887 4443 3455666667778889987
Q ss_pred ------------CCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCc
Q 003363 383 ------------GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP 450 (826)
Q Consensus 383 ------------G~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ 450 (826)
|.+|+..+.+ ..|.+||+.++.......+ +...+..+.
T Consensus 296 ~~~~~~~~~~~~g~~l~sgs~D-----------~~i~iwd~~~~~~~~~~~~-------------------h~~~v~~v~ 345 (410)
T 1vyh_C 296 ATGSETKKSGKPGPFLLSGSRD-----------KTIKMWDVSTGMCLMTLVG-------------------HDNWVRGVL 345 (410)
T ss_dssp CCSCC-------CCEEEEEETT-----------SEEEEEETTTTEEEEEEEC-------------------CSSCEEEEE
T ss_pred hccccccccCCCCCEEEEEeCC-----------CeEEEEECCCCceEEEEEC-------------------CCCcEEEEE
Confidence 5556544433 4689999877543211100 111344678
Q ss_pred cccCCCEEEEEEEeCCeEEEEEEECCCCcE-EEecCCCCCeeeEEEeecCCEEEEE
Q 003363 451 WLSDGCTMLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDNIIAV 505 (826)
Q Consensus 451 ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~-~~lt~~~~~~~~~~~s~dg~~l~~~ 505 (826)
|+|+|+.|+ +...++. |..+|+.+++. ..+......+....|++++..++..
T Consensus 346 ~~~~g~~l~-s~s~D~~--i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sg 398 (410)
T 1vyh_C 346 FHSGGKFIL-SCADDKT--LRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398 (410)
T ss_dssp ECSSSSCEE-EEETTTE--EEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEE
T ss_pred EcCCCCEEE-EEeCCCe--EEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEE
Confidence 999998664 4444454 44557666653 4444444455666788887755543
No 278
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.35 E-value=2.4e-12 Score=134.05 Aligned_cols=233 Identities=12% Similarity=0.107 Sum_probs=134.1
Q ss_pred CCeeEEEEEEecCCCC-----CCCCCcEEEEEcCCCCCCCCccchH---HHHHHHHCCcEEEEECCC--CCCC-------
Q 003363 572 AQKPFEAIFVSSSHKK-----DCSCDPLIVVLHGGPHSVSLSSYSK---SLAFLSSVGYSLLIVNYR--GSLG------- 634 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~-----~~~~~P~vv~~HGg~~~~~~~~~~~---~~~~la~~G~~Vl~~d~r--G~~g------- 634 (826)
-+.++...+|+|+++. .++++|+|+++||.+.. ...|.. ..+.+++.|.+++.++-. +..-
T Consensus 24 l~~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~--~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~~~~~~~~~~~ 101 (299)
T 4fol_A 24 TKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCT--PDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGS 101 (299)
T ss_dssp TSSEEEEEEEECGGGGCC------CBCEEEEECCTTCC--HHHHHHHSCHHHHHHHHTCEEEEECSSCCSTTSCCCTTCC
T ss_pred cCCceEEEEEcCCCCCccccccCCCcCEEEEECCCCCC--hHHHHHhchHhHHHHHcCchhhccCCCcceeecCCCcccc
Confidence 3567888999998763 35689999999997654 334432 334567789999999842 1100
Q ss_pred --Cc--hhhhhcC-------CCCCCcchHHHHHHHHHHHHH----cCCCCCCcEEEEEecchHHHHHHHHHhC--CCcee
Q 003363 635 --FG--EEALQSL-------PGKVGSQDVNDVLTAIDHVID----MGLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFV 697 (826)
Q Consensus 635 --~G--~~~~~~~-------~~~~~~~~~~D~~~~i~~l~~----~~~~d~~rv~l~G~S~GG~~a~~~a~~~--p~~~~ 697 (826)
.| ..+.... ...+...-.+++...|+.-.. +...+.++.+|.|+||||+.|+.++.++ |+.+.
T Consensus 102 ~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~al~~~~~~~~~ 181 (299)
T 4fol_A 102 WDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGYLKGYSGKRYK 181 (299)
T ss_dssp SSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHHHHTGGGTCCS
T ss_pred cccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHHHhCCCCCceE
Confidence 00 0000000 001111123344444332221 1112456899999999999999999985 67889
Q ss_pred EEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChhhHHHHhhcCccccc---CCC-CCcEEEEEeCCCCCC
Q 003363 698 AAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHI---SKV-KTPTIFLLGAQDLRV 773 (826)
Q Consensus 698 a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~---~~i-~~PvLii~G~~D~~v 773 (826)
++.+.+|+++.... .|..... . .+.+ .....+...++...+ .+. ..+++|-+|+.|.+.
T Consensus 182 ~~~s~s~~~~p~~~-------~~~~~~~-~-----~~~g----~~~~~~~~~d~~~l~~~~~~~~~~~i~id~G~~D~f~ 244 (299)
T 4fol_A 182 SCSAFAPIVNPSNV-------PWGQKAF-K-----GYLG----EEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFL 244 (299)
T ss_dssp EEEEESCCCCGGGS-------HHHHHHH-H-----HHTC---------CGGGCHHHHGGGSCCCTTCCEEEEEETTCTTH
T ss_pred EEEecccccCcccc-------ccccccc-c-----cccc----cchhhhhhcCHHHHHHhcccCCCCceEEEecCCCcch
Confidence 99999998764321 1111000 0 0000 111122333333322 222 367999999999876
Q ss_pred CcH-HHHHHHHHHHhCCCC--EEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 003363 774 PVS-NGLQYARALREKGVE--TKVIVFPNDVHGIERPQSDFESFLNIGLWFKKYCK 826 (826)
Q Consensus 774 p~~-~~~~~~~~l~~~g~~--~~~~~~p~~~H~~~~~~~~~~~~~~i~~w~~~~l~ 826 (826)
... ....+.++++++|.+ +++...||.+|.+... ...++..++|+.++|+
T Consensus 245 ~~~l~~~~f~~a~~~~g~~~~~~~r~~~GydHsy~f~---~~fi~dhl~fha~~Lg 297 (299)
T 4fol_A 245 EEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFV---STFVPEHAEFHARNLG 297 (299)
T ss_dssp HHHTCTHHHHHHHTTSTTTTCEEEEEETTCCSSHHHH---HHHHHHHHHHHHHHTT
T ss_pred hhhcCHHHHHHHHHhcCCCceEEEEeCCCCCCCHHHH---HHHHHHHHHHHHHhcC
Confidence 321 135688889888865 7888999989975321 2345667888888875
No 279
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.35 E-value=3.6e-11 Score=133.44 Aligned_cols=291 Identities=11% Similarity=-0.002 Sum_probs=168.4
Q ss_pred EEeCCCCCeEEEEecCCC------------CCCeEEEEec-CCceeEEE--ecCCCccccccCCCcccceeecCCCCeEE
Q 003363 159 VVPSPSGSKLLVVRNPEN------------ESPIQFELWS-QSQLEKEF--HVPQTVHGSVYADGWFEGISWNSDETLIA 223 (826)
Q Consensus 159 ~~~SPdG~~la~~~~~~~------------~~~~~~~i~~-~~~~~~~~--~~~~~~~g~v~~~~~~~~~~wSPDg~~ia 223 (826)
|.|+|+++.++++..... +...++.++. ++....+. ...... ..++|+| ++.++
T Consensus 69 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~----------~~~~~s~-~~~~~ 137 (433)
T 3bws_A 69 PVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQP----------KSVRFID-NTRLA 137 (433)
T ss_dssp ECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCB----------CCCEESS-SSEEE
T ss_pred eeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCCCc----------eEEEEeC-CCeEE
Confidence 349999888876654321 1124555442 23222222 222222 5889999 55566
Q ss_pred EEeecCCCCCCCccCCCCCCCC-----CCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccc
Q 003363 224 YVAEEPSPSKPTFSLGSTKGGS-----SDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVG 298 (826)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~ 298 (826)
+.+.... ....|+........ ....+........|.++....+++.....|++||+++++..... ......+.
T Consensus 138 ~~~~~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~ 215 (433)
T 3bws_A 138 IPLLEDE-GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV-DLTGKWSK 215 (433)
T ss_dssp EEBTTSS-SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE-ECSSSSEE
T ss_pred EEeCCCC-eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE-cCCCCCee
Confidence 6553321 11223322111111 11122223334556655322334445689999999988765431 22344677
Q ss_pred eEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCce
Q 003363 299 QVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPR 378 (826)
Q Consensus 299 ~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~ 378 (826)
.++|+|||+. |++.+. ....|+++|+ .+++...............
T Consensus 216 ~~~~~~~~~~----l~~~~~--------------~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~ 260 (433)
T 3bws_A 216 ILLYDPIRDL----VYCSNW--------------ISEDISVIDR-----------------KTKLEIRKTDKIGLPRGLL 260 (433)
T ss_dssp EEEEETTTTE----EEEEET--------------TTTEEEEEET-----------------TTTEEEEECCCCSEEEEEE
T ss_pred EEEEcCCCCE----EEEEec--------------CCCcEEEEEC-----------------CCCcEEEEecCCCCceEEE
Confidence 8999999997 766552 2237999998 5555544444445578899
Q ss_pred ecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEE
Q 003363 379 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 458 (826)
Q Consensus 379 ~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l 458 (826)
|+|||++|+..+...... ......|++||+.+++........ ..+..++|+|||+.+
T Consensus 261 ~~~~g~~l~~~~~~~~~~---~~~dg~i~~~d~~~~~~~~~~~~~--------------------~~~~~~~~~~~g~~l 317 (433)
T 3bws_A 261 LSKDGKELYIAQFSASNQ---ESGGGRLGIYSMDKEKLIDTIGPP--------------------GNKRHIVSGNTENKI 317 (433)
T ss_dssp ECTTSSEEEEEEEESCTT---CSCCEEEEEEETTTTEEEEEEEEE--------------------ECEEEEEECSSTTEE
T ss_pred EcCCCCEEEEEECCCCcc---ccCCCeEEEEECCCCcEEeeccCC--------------------CCcceEEECCCCCEE
Confidence 999999988777543110 012357999998875432111000 022356899999988
Q ss_pred EEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCC-----------CeEEEEeecc
Q 003363 459 LLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDV-----------PQVKYGYFVD 522 (826)
Q Consensus 459 ~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p-----------~~l~~~~~~~ 522 (826)
+++...+ ..++.+|+.+++...............++++++.+++........ ..|++.++.+
T Consensus 318 ~~~~~~~--~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~ 390 (433)
T 3bws_A 318 YVSDMCC--SKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT 390 (433)
T ss_dssp EEEETTT--TEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT
T ss_pred EEEecCC--CEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC
Confidence 7775433 467777888888766555444556678899998887776554332 2677776543
No 280
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=99.34 E-value=3.4e-12 Score=130.76 Aligned_cols=210 Identities=14% Similarity=0.072 Sum_probs=127.7
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcE---E----------EEECCCCCCCCchhhhhc---CCCCCCcchHHHHH
Q 003363 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVGYS---L----------LIVNYRGSLGFGEEALQS---LPGKVGSQDVNDVL 656 (826)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~---V----------l~~d~rG~~g~G~~~~~~---~~~~~~~~~~~D~~ 656 (826)
+.||++||.+.+ ...|...+..|+++++. + +.+|-++.+..+...... ..........+|+.
T Consensus 4 ~pvvllHG~~~~--~~~~~~l~~~L~~~~~~~~~~~~~~v~~~G~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~ 81 (254)
T 3ds8_A 4 IPIILIHGSGGN--ASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK 81 (254)
T ss_dssp CCEEEECCTTCC--TTTTHHHHHHHHHTTCCCCCEEEEEEETTTEEEEESCCCTTCSSCEEEEEESSTTSCHHHHHHHHH
T ss_pred CCEEEECCCCCC--cchHHHHHHHHHHhcCCCceEEEEEEcCCCeEEEEEEeccCCCCCEEEEEecCCCCCHHHHHHHHH
Confidence 458899997655 45688889999988763 2 333322111111110000 00001112255666
Q ss_pred HHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCC-----ceeEEEecCCccchhhhccCCCCCCchhhhhccCcCC
Q 003363 657 TAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPD-----KFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGK 731 (826)
Q Consensus 657 ~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~-----~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (826)
++++.+.+.. ..+++.++||||||.+++.++.++|+ +++++|++++..+........ ....
T Consensus 82 ~~i~~l~~~~--~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~--------~~~~---- 147 (254)
T 3ds8_A 82 IAMEDLKSRY--GFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNG--------MDLS---- 147 (254)
T ss_dssp HHHHHHHHHH--CCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHC--------SCTT----
T ss_pred HHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccc--------cccc----
Confidence 6778877763 33789999999999999999999998 899999998866532211000 0000
Q ss_pred ccCCCCCC-hhhHHHHhhcCcccccCCCCCcEEEEEeC------CCCCCCcHHHHHHHHHHHhCCCCEEEEEeCC--CCC
Q 003363 732 DSFTESPS-VEDLTRFHSKSPISHISKVKTPTIFLLGA------QDLRVPVSNGLQYARALREKGVETKVIVFPN--DVH 802 (826)
Q Consensus 732 ~~~~~~~~-~~~~~~~~~~sp~~~~~~i~~PvLii~G~------~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~--~~H 802 (826)
+...+. ......+... ...+.+ ++|+|.|+|. .|..||+..++.+...++......+.+.+.+ ++|
T Consensus 148 --~~~~p~~~~~~~~~~~~--~~~~~~-~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~~~~~~~~~~~g~~a~H 222 (254)
T 3ds8_A 148 --FKKLPNSTPQMDYFIKN--QTEVSP-DLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGSAKAYIEDIQVGEDAVH 222 (254)
T ss_dssp --CSSCSSCCHHHHHHHHT--GGGSCT-TCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTTBSEEEEEEEESGGGCG
T ss_pred --cccCCcchHHHHHHHHH--HhhCCC-CcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhccCcceEEEEEeCCCCch
Confidence 001111 1111222111 112222 6899999999 9999999999888777776545566666766 669
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc
Q 003363 803 GIERPQSDFESFLNIGLWFKKYC 825 (826)
Q Consensus 803 ~~~~~~~~~~~~~~i~~w~~~~l 825 (826)
..... +. ++.+.+..||+++.
T Consensus 223 s~l~~-~~-~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 223 QTLHE-TP-KSIEKTYWFLEKFK 243 (254)
T ss_dssp GGGGG-SH-HHHHHHHHHHHTCC
T ss_pred hcccC-CH-HHHHHHHHHHHHhc
Confidence 76544 33 58889999998764
No 281
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.34 E-value=1.8e-11 Score=147.73 Aligned_cols=238 Identities=9% Similarity=-0.003 Sum_probs=148.7
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003363 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (826)
Q Consensus 102 ~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (826)
-.+||||+.++... ....+.++++.+ +.....++... ..+..++|||||++|++....+ .
T Consensus 19 i~~sp~~~~la~~~---------~~g~v~iwd~~~-~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~dg-----~ 78 (814)
T 3mkq_A 19 IDFHPTEPWVLTTL---------YSGRVEIWNYET-QVEVRSIQVTE-----TPVRAGKFIARKNWIIVGSDDF-----R 78 (814)
T ss_dssp EEECSSSSEEEEEE---------TTSEEEEEETTT-TEEEEEEECCS-----SCEEEEEEEGGGTEEEEEETTS-----E
T ss_pred EEECCCCCEEEEEe---------CCCEEEEEECCC-CceEEEEecCC-----CcEEEEEEeCCCCEEEEEeCCC-----e
Confidence 34589999888753 223566666532 22233444333 4689999999999999886643 5
Q ss_pred EEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCccee
Q 003363 182 FELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (826)
Q Consensus 182 ~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (826)
+.+|+ .++...... ...+.| ..+.|||||++|+..+.+.....+.+... .........+........|
T Consensus 79 i~vw~~~~~~~~~~~~---~~~~~v------~~~~~s~~~~~l~~~~~dg~i~vw~~~~~-~~~~~~~~~~~~~v~~~~~ 148 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDFE---AHPDYI------RSIAVHPTKPYVLSGSDDLTVKLWNWENN-WALEQTFEGHEHFVMCVAF 148 (814)
T ss_dssp EEEEETTTCCEEEEEE---CCSSCE------EEEEECSSSSEEEEEETTSEEEEEEGGGT-SEEEEEEECCSSCEEEEEE
T ss_pred EEEEECCCCcEEEEEe---cCCCCE------EEEEEeCCCCEEEEEcCCCEEEEEECCCC-ceEEEEEcCCCCcEEEEEE
Confidence 66773 343333332 122222 78999999999998877654432222110 0111122234444556778
Q ss_pred ec-CCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEee--CCCCCccEEEEEeecCcceeeeeeeeccCCCc
Q 003363 260 EE-DWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP--LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA 336 (826)
Q Consensus 260 ~~-d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSP--Dg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~ 336 (826)
.+ +....+++.....|.+||+.+++............+..++|+| ||+. |+..+ .+..
T Consensus 149 ~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~----l~~~~---------------~dg~ 209 (814)
T 3mkq_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY----MITAS---------------DDLT 209 (814)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCE----EEEEC---------------TTSE
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCE----EEEEe---------------CCCE
Confidence 88 5334455556788999999876644331122235677899999 8886 66655 2347
Q ss_pred eEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCC
Q 003363 337 LYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 337 l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
|..+|+ .++. ...+..+...+....|+|||+.|+..+.+ ..|++||+.++.
T Consensus 210 i~~~d~-----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------g~v~vwd~~~~~ 261 (814)
T 3mkq_A 210 IKIWDY-----------------QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSED-----------GTLKIWNSSTYK 261 (814)
T ss_dssp EEEEET-----------------TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETT-----------SCEEEEETTTCS
T ss_pred EEEEEC-----------------CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC-----------CeEEEEECCCCc
Confidence 888897 3333 45566666778889999999988776644 348889987754
Q ss_pred C
Q 003363 416 N 416 (826)
Q Consensus 416 ~ 416 (826)
.
T Consensus 262 ~ 262 (814)
T 3mkq_A 262 V 262 (814)
T ss_dssp E
T ss_pred E
Confidence 3
No 282
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.34 E-value=6.9e-11 Score=126.68 Aligned_cols=261 Identities=8% Similarity=0.038 Sum_probs=145.1
Q ss_pred EEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCC--CccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 003363 159 VVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQ--TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (826)
Q Consensus 159 ~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~--~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~ 235 (826)
++++++++.++.....+ +++.++ ..++..+.+.... .. ..+.|||||+.+++...
T Consensus 5 ~~~~~~~~~~v~~~~~~----~v~~~d~~~~~~~~~~~~~~~~~~----------~~~~~s~dg~~~~v~~~-------- 62 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPN----NLHVVDVASDTVYKSCVMPDKFGP----------GTAMMAPDNRTAYVLNN-------- 62 (349)
T ss_dssp CCCCTTCEEEEEEETTT----EEEEEETTTTEEEEEEECSSCCSS----------CEEEECTTSSEEEEEET--------
T ss_pred ccccCCCEEEEEeCCCC----eEEEEECCCCcEEEEEecCCCCCC----------ceeEECCCCCEEEEEeC--------
Confidence 46788777665544332 466555 4556555555443 33 68999999997776532
Q ss_pred ccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCC-----CCccceEEEeeCCCCCc
Q 003363 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK-----SLSVGQVVWAPLNEGLH 310 (826)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~-----~~~~~~~~wSPDg~~~~ 310 (826)
....|+++|+++++......... ...+..++|+|||+.
T Consensus 63 -----------------------------------~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-- 105 (349)
T 1jmx_B 63 -----------------------------------HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE-- 105 (349)
T ss_dssp -----------------------------------TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSE--
T ss_pred -----------------------------------CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCE--
Confidence 23679999999887654311111 123568899999998
Q ss_pred cEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCccee---cCCCCccccCceecCCCCEEE
Q 003363 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN---LTESISSAFFPRFSPDGKFLV 387 (826)
Q Consensus 311 ~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---Lt~~~~~~~~p~~SpDG~~l~ 387 (826)
|++........+ ..| ......|+++|+ .+++... ............|||||+ |+
T Consensus 106 --l~~~~~~~~~~~--~~~-~~~~~~i~~~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 106 --VYATVNPTQRLN--DHY-VVKPPRLEVFST-----------------ADGLEAKPVRTFPMPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp --EEEEEEEEEECS--SCE-EECCCEEEEEEG-----------------GGGGGBCCSEEEECCSSCCCEEECTTSC-EE
T ss_pred --EEEEcccccccc--ccc-ccCCCeEEEEEC-----------------CCccccceeeeccCCCcccceeECCCCc-EE
Confidence 877663210000 000 012347999998 3332211 112223455667999999 54
Q ss_pred EEeccCCCCCCCCcccceEEEEeCCCCCCCCc-cccee------------------------eeeeeeeccC--------
Q 003363 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-LEKIV------------------------DVIPVVQCAE-------- 434 (826)
Q Consensus 388 f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~-~~~~~------------------------~~~~~~~~~~-------- 434 (826)
. .. .+|+++|+.+++.... ..... ....+...+.
T Consensus 163 ~-~~------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 229 (349)
T 1jmx_B 163 V-AG------------PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA 229 (349)
T ss_dssp E-ES------------SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC
T ss_pred E-cc------------CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc
Confidence 4 21 1288888877654321 11100 0000000000
Q ss_pred ------------CCCCcc----cccCCCCCCcccc-CCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEee
Q 003363 435 ------------GDCFPG----LYSSSILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTL 497 (826)
Q Consensus 435 ------------~~~f~g----~~~~~~~~~~ws~-Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~ 497 (826)
.+...- ........++|+| ||+.+++. ...|+.+|+.+++...............+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~ 304 (349)
T 1jmx_B 230 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-----LNRLAKYDLKQRKLIKAANLDHTYYCVAFDK 304 (349)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-----ESEEEEEETTTTEEEEEEECSSCCCEEEECS
T ss_pred ccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-----cCeEEEEECccCeEEEEEcCCCCccceEECC
Confidence 000000 0001123557889 99988766 4578999999998765543333344568899
Q ss_pred cCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 498 DGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 498 dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
+++.+++. +.. ..|.+.+..+.
T Consensus 305 dg~~l~~~--~~~--~~v~v~d~~~~ 326 (349)
T 1jmx_B 305 KGDKLYLG--GTF--NDLAVFNPDTL 326 (349)
T ss_dssp SSSCEEEE--SBS--SEEEEEETTTT
T ss_pred CCCEEEEe--cCC--CeEEEEecccc
Confidence 99888763 222 56888886543
No 283
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.33 E-value=2.7e-11 Score=133.68 Aligned_cols=275 Identities=11% Similarity=0.054 Sum_probs=165.4
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEE
Q 003363 105 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFEL 184 (826)
Q Consensus 105 s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i 184 (826)
+||++.++- +.....+.++++.+. .....+.... ..+...+|+|||+.|+..+..+ .+.+
T Consensus 117 ~p~~~~l~s---------~s~Dg~i~vwd~~~~-~~~~~l~~h~-----~~V~~v~~~~~~~~l~sgs~D~-----~i~i 176 (410)
T 1vyh_C 117 HPVFSVMVS---------ASEDATIKVWDYETG-DFERTLKGHT-----DSVQDISFDHSGKLLASCSADM-----TIKL 176 (410)
T ss_dssp CSSSSEEEE---------EESSSCEEEEETTTC-CCCEEECCCS-----SCEEEEEECTTSSEEEEEETTS-----CCCE
T ss_pred cCCCCEEEE---------EeCCCeEEEEECCCC-cEEEEEeccC-----CcEEEEEEcCCCCEEEEEeCCC-----eEEE
Confidence 566665433 233456677776332 2223333232 4588999999999998776543 3456
Q ss_pred ecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCC
Q 003363 185 WSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWG 264 (826)
Q Consensus 185 ~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g 264 (826)
|+-.....+..+ .+..+.| ..+.|+|||+.|+..+.+.... .|+............+..+.....+.++..
T Consensus 177 wd~~~~~~~~~~-~~h~~~V------~~v~~~p~~~~l~s~s~D~~i~--~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~ 247 (410)
T 1vyh_C 177 WDFQGFECIRTM-HGHDHNV------SSVSIMPNGDHIVSASRDKTIK--MWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247 (410)
T ss_dssp EETTSSCEEECC-CCCSSCE------EEEEECSSSSEEEEEETTSEEE--EEETTTCCEEEEEECCSSCEEEEEECTTSS
T ss_pred EeCCCCceeEEE-cCCCCCE------EEEEEeCCCCEEEEEeCCCeEE--EEECCCCcEEEEEeCCCccEEEEEECCCCC
Confidence 632221222221 2222233 7899999999999888776543 333322222223344556666667777744
Q ss_pred ccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCC----------------ccEEEEEeecCcceeeeee
Q 003363 265 ETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGL----------------HQYLVFVGWSSETRKLGIK 328 (826)
Q Consensus 265 ~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~----------------~~~lvf~~~~~~~~~~g~~ 328 (826)
..+++..+..|.+||+.+++..... ......+..++|+|++... .++|+..+
T Consensus 248 ~l~s~s~D~~v~vwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs----------- 315 (410)
T 1vyh_C 248 LIASCSNDQTVRVWVVATKECKAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS----------- 315 (410)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE-----------
T ss_pred EEEEEcCCCeEEEEECCCCceeeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe-----------
Confidence 4455666789999999888765431 3344567789999984310 00033333
Q ss_pred eeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEE
Q 003363 329 YCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLH 407 (826)
Q Consensus 329 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~ 407 (826)
.+..|.++|+ .++. ...+..+...+....|+|||++|+..+.+ ..|.
T Consensus 316 ----~D~~i~iwd~-----------------~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D-----------~~i~ 363 (410)
T 1vyh_C 316 ----RDKTIKMWDV-----------------STGMCLMTLVGHDNWVRGVLFHSGGKFILSCADD-----------KTLR 363 (410)
T ss_dssp ----TTSEEEEEET-----------------TTTEEEEEEECCSSCEEEEEECSSSSCEEEEETT-----------TEEE
T ss_pred ----CCCeEEEEEC-----------------CCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCC-----------CeEE
Confidence 3447889998 4443 45666677778889999999998866543 4689
Q ss_pred EEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEE
Q 003363 408 RIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 472 (826)
Q Consensus 408 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~ 472 (826)
+||+.++........ +...+..+.|+|++..| ++...++...+|.
T Consensus 364 vwd~~~~~~~~~~~~-------------------h~~~v~~l~~~~~~~~l-~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 364 VWDYKNKRCMKTLNA-------------------HEHFVTSLDFHKTAPYV-VTGSVDQTVKVWE 408 (410)
T ss_dssp EECCTTSCCCEEEEC-------------------CSSCEEEEEECSSSSCE-EEEETTSEEEEEC
T ss_pred EEECCCCceEEEEcC-------------------CCCcEEEEEEcCCCCEE-EEEeCCCcEEEEe
Confidence 999877543211111 11134567899999855 5556666666664
No 284
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.33 E-value=4e-11 Score=151.91 Aligned_cols=235 Identities=12% Similarity=0.037 Sum_probs=154.4
Q ss_pred cccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEec
Q 003363 209 WFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV 288 (826)
Q Consensus 209 ~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l 288 (826)
....++|||||+.|+....++... .|+............+........|+++....+++.....|.+||+.+++...+
T Consensus 963 ~i~~~~~sp~g~~l~~g~~~g~i~--i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 963 QVSCCCLSPHLEYVAFGDEDGAIK--IIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCE--EEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECC
T ss_pred cEEEEEEcCCCCEEEEEcCCCCEE--EEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEE
Confidence 347889999999999988766433 233222222223334555666788998865566666778999999999988766
Q ss_pred cCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCC-cceec
Q 003363 289 KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL-PVVNL 367 (826)
Q Consensus 289 ~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~L 367 (826)
......+..+.|+||++ ++..+ .+..|+.+|+ .++ ....+
T Consensus 1041 --~~~~~~v~~~~~~~~~~-----l~~~~---------------~dg~v~vwd~-----------------~~~~~~~~~ 1081 (1249)
T 3sfz_A 1041 --QAHQETVKDFRLLQDSR-----LLSWS---------------FDGTVKVWNV-----------------ITGRIERDF 1081 (1249)
T ss_dssp --BCCSSCEEEEEECSSSE-----EEEEE---------------SSSEEEEEET-----------------TTTCCCEEE
T ss_pred --ecCCCcEEEEEEcCCCc-----EEEEE---------------CCCcEEEEEC-----------------CCCceeEEE
Confidence 44555778899999876 55444 2337889998 444 34566
Q ss_pred CCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCC
Q 003363 368 TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSIL 447 (826)
Q Consensus 368 t~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~ 447 (826)
..+...+....|||||+.|+..+.+ ..|.+||+.++......... ...+.
T Consensus 1082 ~~~~~~v~~~~~s~d~~~l~s~s~d-----------~~v~iwd~~~~~~~~~l~~h-------------------~~~v~ 1131 (1249)
T 3sfz_A 1082 TCHQGTVLSCAISSDATKFSSTSAD-----------KTAKIWSFDLLSPLHELKGH-------------------NGCVR 1131 (1249)
T ss_dssp ECCSSCCCCEEECSSSSSCEEECCS-----------SCCCEECSSSSSCSBCCCCC-------------------SSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEcCC-----------CcEEEEECCCcceeeeeccC-------------------CCcEE
Confidence 6677788999999999998876654 34788888776543221111 11334
Q ss_pred CCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec----------CCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEE
Q 003363 448 SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT----------PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKY 517 (826)
Q Consensus 448 ~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt----------~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~ 517 (826)
.++|+|||+.|+. ...++. |..+|+.+++..... ...+.+....|++|+..++... ..+.+
T Consensus 1132 ~~~~s~dg~~lat-~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~------g~v~v 1202 (1249)
T 3sfz_A 1132 CSAFSLDGILLAT-GDDNGE--IRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG------GYLKW 1202 (1249)
T ss_dssp EEEECSSSSEEEE-EETTSC--CCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES------SSEEE
T ss_pred EEEECCCCCEEEE-EeCCCE--EEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC------CeEEE
Confidence 6789999996654 444444 555577777654322 2223455678999998776542 35777
Q ss_pred Eeeccc
Q 003363 518 GYFVDK 523 (826)
Q Consensus 518 ~~~~~~ 523 (826)
.++.++
T Consensus 1203 wd~~~g 1208 (1249)
T 3sfz_A 1203 WNVATG 1208 (1249)
T ss_dssp BCSSSC
T ss_pred EECCCC
Confidence 776544
No 285
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.33 E-value=3.3e-10 Score=122.55 Aligned_cols=250 Identities=11% Similarity=0.090 Sum_probs=145.0
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCC-CccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENE-NSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~-~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (826)
++|||+.++... ....+.++++.+... ....+.... ..+...+|+|||+.|+.....+ .+
T Consensus 16 ~s~~~~~l~~~~---------~d~~v~i~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~~~~~dg-----~i 76 (372)
T 1k8k_C 16 WNKDRTQIAICP---------NNHEVHIYEKSGNKWVQVHELKEHN-----GQVTGVDWAPDSNRIVTCGTDR-----NA 76 (372)
T ss_dssp ECTTSSEEEEEC---------SSSEEEEEEEETTEEEEEEEEECCS-----SCEEEEEEETTTTEEEEEETTS-----CE
T ss_pred ECCCCCEEEEEe---------CCCEEEEEeCCCCcEEeeeeecCCC-----CcccEEEEeCCCCEEEEEcCCC-----eE
Confidence 479999887642 234566666643310 223333232 4588999999999998876532 34
Q ss_pred EEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceee
Q 003363 183 ELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (826)
Q Consensus 183 ~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (826)
.+| ..++........ ...+.| ..+.|+|||+.|+..+.+
T Consensus 77 ~vwd~~~~~~~~~~~~~-~~~~~v------~~~~~~~~~~~l~~~~~d-------------------------------- 117 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVIL-RINRAA------RCVRWAPNEKKFAVGSGS-------------------------------- 117 (372)
T ss_dssp EEEEEETTEEEEEEECC-CCSSCE------EEEEECTTSSEEEEEETT--------------------------------
T ss_pred EEEECCCCeeeeeEEee-cCCCce------eEEEECCCCCEEEEEeCC--------------------------------
Confidence 455 233333333221 122222 789999999999887543
Q ss_pred cCCCccCCCccCceEEEEEccCCc----eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCc
Q 003363 261 EDWGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA 336 (826)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~----~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~ 336 (826)
..|.+||+.+++ ...+. ......+..++|+||++. |+..+ .+..
T Consensus 118 ------------~~v~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~----l~~~~---------------~dg~ 165 (372)
T 1k8k_C 118 ------------RVISICYFEQENDWWVCKHIK-KPIRSTVLSLDWHPNSVL----LAAGS---------------CDFK 165 (372)
T ss_dssp ------------SSEEEEEEETTTTEEEEEEEC-TTCCSCEEEEEECTTSSE----EEEEE---------------TTSC
T ss_pred ------------CEEEEEEecCCCcceeeeeee-cccCCCeeEEEEcCCCCE----EEEEc---------------CCCC
Confidence 458888888776 23331 233456789999999997 76665 2336
Q ss_pred eEEEEcccccc-hhhhhhhhcCCCCCC-cceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCC
Q 003363 337 LYAVRVSLYKS-EASELELKESSSEDL-PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (826)
Q Consensus 337 l~~~d~~~~~~-~~~~~~~~~~~~~~~-~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~ 414 (826)
|+++|+..... ..........+...+ ....+..+...+....|+|||+.|+..+.+ ..|.+||+.++
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~i~d~~~~ 234 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD-----------STVCLADADKK 234 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT-----------TEEEEEEGGGT
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC-----------CEEEEEECCCC
Confidence 77777521000 000000000000122 344555666678899999999988877644 45899998775
Q ss_pred CCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEEC
Q 003363 415 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 475 (826)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl 475 (826)
+..... .. ....+..+.|+|||+.| ++. .++...+|.++-
T Consensus 235 ~~~~~~----------~~---------~~~~v~~~~~~~~~~~l-~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 235 MAVATL----------AS---------ETLPLLAVTFITESSLV-AAG-HDCFPVLFTYDS 274 (372)
T ss_dssp TEEEEE----------EC---------SSCCEEEEEEEETTEEE-EEE-TTSSCEEEEEET
T ss_pred ceeEEE----------cc---------CCCCeEEEEEecCCCEE-EEE-eCCeEEEEEccC
Confidence 432111 00 01123467899999744 443 556667776654
No 286
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.33 E-value=3.5e-11 Score=133.54 Aligned_cols=261 Identities=11% Similarity=0.030 Sum_probs=152.7
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
.++...+|||||+.+|..+.+. ... . ++..+.+ .+..+.| ..++||||| .. ..
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~-----TV~-d--~~~~~~l---~gh~~~v------~~V~FsPdg-------~~---~~ 68 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDI-----SIG-Q--PKYAKDI---NCNSKNL------FHVKEFPLE-------FE---NK 68 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSE-----EEE-E--ECCCSCC---SSBGGGT------EEEEEECCC-------CC---CT
T ss_pred ccEEEEEECCCCCEEEEEcCCc-----eee-c--cccccee---cCCCccE------EEEEECCCC-------Cc---ce
Confidence 3688999999999999765432 222 2 1111111 2333333 789999999 11 12
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCC-----ccceEEEeeCCCC
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSL-----SVGQVVWAPLNEG 308 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~-----~~~~~~wSPDg~~ 308 (826)
..+........... .+..++....|+||.....+......+.+||.++ ....+ . .+. .+..++|||||+.
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l--~-~~~~~~~~sv~svafSPDG~~ 143 (588)
T 2j04_A 69 LDFELAQQNGLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNL--D-SKGNLSSRTYHCFEWNPIESS 143 (588)
T ss_dssp TTTSCCCSSCSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEEC--C-CSSCSTTTCEEEEEECSSSSC
T ss_pred EEEEeCCCceEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeec--c-CCCccccccEEEEEEcCCCCE
Confidence 22221111111111 2356677888999965566666778899999654 33333 2 222 4779999999998
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc--------ceec----CCCCccccC
Q 003363 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP--------VVNL----TESISSAFF 376 (826)
Q Consensus 309 ~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~--------~~~L----t~~~~~~~~ 376 (826)
|+..+ .++.|.++|+ .++. ...+ .++...+..
T Consensus 144 ----LAsgs---------------~DGtVkIWd~-----------------~~~~l~~~~~i~l~ti~~~~~gh~~~V~s 187 (588)
T 2j04_A 144 ----IVVGN---------------EDGELQFFSI-----------------RKNSENTPEFYFESSIRLSDAGSKDWVTH 187 (588)
T ss_dssp ----EEEEE---------------TTSEEEEEEC-----------------CCCTTTCCCCEEEEEEECSCTTCCCCEEE
T ss_pred ----EEEEc---------------CCCEEEEEEC-----------------CCCccccccceeeeeeecccccccccEEE
Confidence 88877 3447888887 4443 2344 334457889
Q ss_pred ceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCC
Q 003363 377 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 456 (826)
Q Consensus 377 p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~ 456 (826)
.+||||| |+..+.+ ..+++||+.++........ +.. .+...+..++|+ |+
T Consensus 188 VawSPdg--Laass~D-----------~tVrlWd~~~~~~~~~~~t-------L~~--------~h~~~V~svaFs--g~ 237 (588)
T 2j04_A 188 IVWYEDV--LVAALSN-----------NSVFSMTVSASSHQPVSRM-------IQN--------ASRRKITDLKIV--DY 237 (588)
T ss_dssp EEEETTE--EEEEETT-----------CCEEEECCCSSSSCCCEEE-------EEC--------CCSSCCCCEEEE--TT
T ss_pred EEEcCCc--EEEEeCC-----------CeEEEEECCCCccccceee-------ecc--------cccCcEEEEEEE--CC
Confidence 9999999 5544433 4588999877553210000 000 011246688899 56
Q ss_pred EEEEEEEeCCeEEEEEEECCCCcEEEec-CCCCCeeeEEE--eecCCEEEEEEeCCCCCCeEEEEe
Q 003363 457 TMLLSSIWGSSQVIISVNVSSGELLRIT-PAESNFSWSLL--TLDGDNIIAVSSSPVDVPQVKYGY 519 (826)
Q Consensus 457 ~l~~~~~~~~~~~l~~vdl~tg~~~~lt-~~~~~~~~~~~--s~dg~~l~~~~s~~~~p~~l~~~~ 519 (826)
.|+.+ . . ..+..+|+.+++...+. .....+....| ++++..++ ++..... +++..+
T Consensus 238 ~LASa-~-~--~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La-~a~edG~--klw~~d 296 (588)
T 2j04_A 238 KVVLT-C-P--GYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILL-MSNKTSY--KVLLED 296 (588)
T ss_dssp EEEEE-C-S--SEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEE-ECSSCEE--EEEESS
T ss_pred EEEEE-e-C--CeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEE-EEcCCCC--EEEeec
Confidence 55443 2 2 47777788888885555 43335566678 87775433 3332222 566543
No 287
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=99.32 E-value=2.9e-11 Score=132.19 Aligned_cols=120 Identities=14% Similarity=0.089 Sum_probs=86.9
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHH------CCcEEEEECCCCCCCCchhhhhcCCC
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSS------VGYSLLIVNYRGSLGFGEEALQSLPG 645 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~------~G~~Vl~~d~rG~~g~G~~~~~~~~~ 645 (826)
+|..++.....+. ....|.||++||.+++ ...|...+..|++ .||.|+++|+||.| .+... .
T Consensus 93 ~g~~i~~~~~~~~----~~~~~pllllHG~~~s--~~~~~~~~~~L~~~~~~~~~gf~vv~~DlpG~G---~S~~~---~ 160 (408)
T 3g02_A 93 EGLTIHFAALFSE----REDAVPIALLHGWPGS--FVEFYPILQLFREEYTPETLPFHLVVPSLPGYT---FSSGP---P 160 (408)
T ss_dssp TTEEEEEEEECCS----CTTCEEEEEECCSSCC--GGGGHHHHHHHHHHCCTTTCCEEEEEECCTTST---TSCCS---C
T ss_pred CCEEEEEEEecCC----CCCCCeEEEECCCCCc--HHHHHHHHHHHhcccccccCceEEEEECCCCCC---CCCCC---C
Confidence 6788887777653 2345779999998866 5578888888887 69999999999944 43211 1
Q ss_pred CCCcchHHHHHHHHHHHHHcCCCCCC-cEEEEEecchHHHHHHHHHhCCCceeEEEecCCc
Q 003363 646 KVGSQDVNDVLTAIDHVIDMGLANPS-KVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPL 705 (826)
Q Consensus 646 ~~~~~~~~D~~~~i~~l~~~~~~d~~-rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~ 705 (826)
......++++.+.+..+++. +..+ ++.++|||+||.+++.++.++|+++...+..++.
T Consensus 161 ~~~~~~~~~~a~~~~~l~~~--lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~ 219 (408)
T 3g02_A 161 LDKDFGLMDNARVVDQLMKD--LGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNM 219 (408)
T ss_dssp SSSCCCHHHHHHHHHHHHHH--TTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCC
T ss_pred CCCCCCHHHHHHHHHHHHHH--hCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCC
Confidence 11233567777777777665 3344 8999999999999999999998766666655443
No 288
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.32 E-value=2.1e-10 Score=121.73 Aligned_cols=243 Identities=12% Similarity=0.120 Sum_probs=142.4
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|+|||++|+..+..+ .+.+|+ .++..+.+. +..+.| ..+.|+||++.|+..+.+...
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~-----~v~~wd~~~~~~~~~~~---~h~~~v------~~~~~~~~~~~l~s~s~D~~i 131 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDK-----TLRLWDVATGETYQRFV---GHKSDV------MSVDIDKKASMIISGSRDKTI 131 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEE---CCSSCE------EEEEECTTSCEEEEEETTSCE
T ss_pred ccEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCCeeEEEc---cCCCcE------EEEEEcCCCCEEEEEeCCCeE
Confidence 4588899999999998876544 577883 333333222 222233 789999999999998887755
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCC------CccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeC
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDW------GETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPL 305 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~------g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPD 305 (826)
+. |+.. .........+..+.....+.+.- ...+++..+..|.+||+.+++..... ......+..++|+||
T Consensus 132 ~v--wd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~sp~ 207 (319)
T 3frx_A 132 KV--WTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF-IGHNSNINTLTASPD 207 (319)
T ss_dssp EE--EETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE-CCCCSCEEEEEECTT
T ss_pred EE--EECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee-cCCCCcEEEEEEcCC
Confidence 43 3221 11111122333444444454431 12344556688999999887755431 334456788999999
Q ss_pred CCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCE
Q 003363 306 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKF 385 (826)
Q Consensus 306 g~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~ 385 (826)
|+. |+..+ .+..|.++|+ .+++..........+...+|||||+.
T Consensus 208 g~~----l~s~~---------------~dg~i~iwd~-----------------~~~~~~~~~~~~~~v~~~~~sp~~~~ 251 (319)
T 3frx_A 208 GTL----IASAG---------------KDGEIMLWNL-----------------AAKKAMYTLSAQDEVFSLAFSPNRYW 251 (319)
T ss_dssp SSE----EEEEE---------------TTCEEEEEET-----------------TTTEEEEEEECCSCEEEEEECSSSSE
T ss_pred CCE----EEEEe---------------CCCeEEEEEC-----------------CCCcEEEEecCCCcEEEEEEcCCCCE
Confidence 997 77665 3347889998 44443322223445788999999998
Q ss_pred EEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeC
Q 003363 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 465 (826)
Q Consensus 386 l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~ 465 (826)
|+..... .+.+++++++... ........ .+.......+..++|+|||++|+ +...+
T Consensus 252 la~~~~~------------~i~v~~~~~~~~~----------~~~~~~~~-~~~~~~~~~v~~~~~spdg~~l~-sg~~D 307 (319)
T 3frx_A 252 LAAATAT------------GIKVFSLDPQYLV----------DDLRPEFA-GYSKAAEPHAVSLAWSADGQTLF-AGYTD 307 (319)
T ss_dssp EEEEETT------------EEEEEEETTEEEE----------EEECCCCT-TCCGGGCCCEEEEEECTTSSEEE-EEETT
T ss_pred EEEEcCC------------CcEEEEeCcCeee----------eccCcccc-ccccCcCcceeEEEECCCCCEEE-EeecC
Confidence 8755432 2666776553211 10000000 00000111234678999999664 55556
Q ss_pred CeEEEEEEE
Q 003363 466 SSQVIISVN 474 (826)
Q Consensus 466 ~~~~l~~vd 474 (826)
+...||.+.
T Consensus 308 g~i~vWd~~ 316 (319)
T 3frx_A 308 NVIRVWQVM 316 (319)
T ss_dssp SCEEEEEEE
T ss_pred ceEEEEEEe
Confidence 666666554
No 289
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.32 E-value=1.8e-11 Score=134.83 Aligned_cols=293 Identities=15% Similarity=0.145 Sum_probs=165.9
Q ss_pred ccEEEEeCCCCCeEEEEecCCC------CCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEe
Q 003363 155 GASAVVPSPSGSKLLVVRNPEN------ESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVA 226 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~------~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~ 226 (826)
.+...+|||||+.++++....+ .....+.+|+ .+...+.... ....+ .+..+.|||||+.|+..+
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~------~v~~~~~s~~~~~l~~~~ 86 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS-LQVDS------KFNDLDWSHNNKIIAGAL 86 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC-CCCSS------CEEEEEECSSSSCEEEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE-EecCC------ceEEEEECCCCCeEEEEc
Confidence 4667899999995555542211 1222345552 2221111110 01112 237999999999999988
Q ss_pred ecCCCCCCCccCCC----CCCCCCCccCCCCCCcceeecCCC-ccCCCccCceEEEEEccCCc------eEe-cc-CCCC
Q 003363 227 EEPSPSKPTFSLGS----TKGGSSDKDCNSWKGQGDWEEDWG-ETYAGKRQPSLFVININSGE------VQA-VK-GIPK 293 (826)
Q Consensus 227 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~g-~~~~~~~~~~l~v~d~~~g~------~~~-l~-~~~~ 293 (826)
.+.... .|+... .........+........|.++.+ ..+++.....|.+||+.+++ ... +. ....
T Consensus 87 ~dg~v~--vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 87 DNGSLE--LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp SSSCEE--EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred cCCeEE--EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCC
Confidence 776543 233221 111222334555666778888733 34455567889999998876 221 10 0123
Q ss_pred CCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCC--
Q 003363 294 SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTES-- 370 (826)
Q Consensus 294 ~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~-- 370 (826)
...+..++|+||+.. +++++. .+..|.++|+ .+++ ...+...
T Consensus 165 ~~~v~~~~~~~~~~~----~l~~~~--------------~dg~v~iwd~-----------------~~~~~~~~~~~~~~ 209 (416)
T 2pm9_A 165 VDEVISLAWNQSLAH----VFASAG--------------SSNFASIWDL-----------------KAKKEVIHLSYTSP 209 (416)
T ss_dssp SCCCCEEEECSSCTT----EEEEES--------------SSSCEEEEET-----------------TTTEEEEEECCCCC
T ss_pred CCCeeEEEeCCCCCc----EEEEEc--------------CCCCEEEEEC-----------------CCCCcceEEecccc
Confidence 346778999999665 666552 2347889998 4443 3334333
Q ss_pred ----CccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCC-Cccc-ceeeeeeeeeccCCCCCcccccC
Q 003363 371 ----ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF-SSLE-KIVDVIPVVQCAEGDCFPGLYSS 444 (826)
Q Consensus 371 ----~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~f~g~~~~ 444 (826)
...+....|+|||..+++....+ .....|++||+.++... .... . +..
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~~~d-------~~~~~i~~~d~~~~~~~~~~~~~~-------------------~~~ 263 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATATGS-------DNDPSILIWDLRNANTPLQTLNQG-------------------HQK 263 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEEECC-------SSSCCCCEEETTSTTSCSBCCCSC-------------------CSS
T ss_pred ccccCCceEEEEECCCCCCEEEEEECC-------CCCceEEEEeCCCCCCCcEEeecC-------------------ccC
Confidence 45678899999986544444332 11236889998875321 1111 1 111
Q ss_pred CCCCCcccc-CCCEEEEEEEeCCeEEEEEEECCCCcEEEe-cCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 445 SILSNPWLS-DGCTMLLSSIWGSSQVIISVNVSSGELLRI-TPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 445 ~~~~~~ws~-Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~l-t~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
.+..+.|+| |++.| ++...++ .|..+|+.+++.... ......+....|++++..++++.+.. ..|.+.++..
T Consensus 264 ~v~~~~~s~~~~~~l-~s~~~dg--~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d---~~i~iw~~~~ 337 (416)
T 2pm9_A 264 GILSLDWCHQDEHLL-LSSGRDN--TVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFD---NKIEVQTLQN 337 (416)
T ss_dssp CEEEEEECSSCSSCE-EEEESSS--EEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSS---SEEEEEESCC
T ss_pred ceeEEEeCCCCCCeE-EEEeCCC--CEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecC---CcEEEEEccC
Confidence 344678999 77755 4444444 456667777765543 33344455678899885455555443 2366666654
Q ss_pred c
Q 003363 523 K 523 (826)
Q Consensus 523 ~ 523 (826)
.
T Consensus 338 ~ 338 (416)
T 2pm9_A 338 L 338 (416)
T ss_dssp C
T ss_pred C
Confidence 3
No 290
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.31 E-value=1e-10 Score=126.84 Aligned_cols=256 Identities=12% Similarity=0.012 Sum_probs=132.0
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeE-EEEec-------C-
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKL-LVVRN-------P- 174 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~l-a~~~~-------~- 174 (826)
+||||++++ +.+.. .+.+++++.. ++..++...+.. ......+|||||++| +++.+ .
T Consensus 47 ~spdg~~l~-~~~~~---------~v~~~~~~~~-g~~~~~~~~~~~---g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 47 FDHERKNIY-GAAMK---------KWSSFAVKSP-TEIVHEASHPIG---GHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp ECTTSSEEE-EEEBT---------EEEEEEEEET-TEEEEEEEEECC---SSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred ECCCCCEEE-EEccc---------eEEEEEECCC-CCEEEeeEeecC---CCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 489999774 33321 4556666422 222222211100 113347899999973 45543 1
Q ss_pred ----CCCCCeEEEEecCCceeEEEec-CCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcc
Q 003363 175 ----ENESPIQFELWSQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKD 249 (826)
Q Consensus 175 ----~~~~~~~~~i~~~~~~~~~~~~-~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (826)
.++...+|.+...++..+.+.. ...... ...++.|||||++|+.. ..
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~------~~~~~~~spdG~~l~~~-~~--------------------- 164 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENT------GIHGMVFDPTETYLYSA-DL--------------------- 164 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTC------CEEEEEECTTSSEEEEE-ET---------------------
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCC------cceEEEECCCCCEEEEE-cC---------------------
Confidence 2233344444434544433321 100001 12689999999987554 22
Q ss_pred CCCCCCcceeecCCCccCCCccCceEEEEEcc-CCceEeccC--CC-CCCccceEEEeeCCCCCccEEEEEeecCcceee
Q 003363 250 CNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQAVKG--IP-KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKL 325 (826)
Q Consensus 250 ~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~g~~~~l~~--~~-~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~ 325 (826)
+...|+++|++ +|+.+.+.. .+ ....+..++|||||+. |++... .
T Consensus 165 ---------------------~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~----l~v~~~-~----- 213 (365)
T 1jof_A 165 ---------------------TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNY----LYALME-A----- 213 (365)
T ss_dssp ---------------------TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSE----EEEEET-T-----
T ss_pred ---------------------CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCE----EEEEEC-C-----
Confidence 12579999998 787654311 12 1345678899999997 766542 1
Q ss_pred eeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcce-------ecCCC-Cc---------cccCce-ecCCCCEEE
Q 003363 326 GIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-------NLTES-IS---------SAFFPR-FSPDGKFLV 387 (826)
Q Consensus 326 g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-------~Lt~~-~~---------~~~~p~-~SpDG~~l~ 387 (826)
...+.+++++. .+++.. .+..+ .+ ....+. |||||++|+
T Consensus 214 --------~~~v~v~~~~~---------------~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 214 --------GNRICEYVIDP---------------ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp --------TTEEEEEEECT---------------TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred --------CCeEEEEEEeC---------------CCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 12344444310 233321 12111 01 356788 999999885
Q ss_pred EEeccCCCCCCCCcccceEEEEeCC-CCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCcccc---CCCEEEEEEE
Q 003363 388 FLSAKSSVDSGAHSATDSLHRIDWP-TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS---DGCTMLLSSI 463 (826)
Q Consensus 388 f~s~~~~~~~g~~~~~~~l~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~---Dg~~l~~~~~ 463 (826)
.+++.. . ......|.+|+++ ++....+ ...+.. .......++|+| ||++|++...
T Consensus 271 -v~~~~~---~-~~~~~~i~v~~~~~~g~~~~~-------~~~~~~---------~~~~~~~~a~sp~~~dg~~l~v~~~ 329 (365)
T 1jof_A 271 -ASSRAN---K-FELQGYIAGFKLRDCGSIEKQ-------LFLSPT---------PTSGGHSNAVSPCPWSDEWMAITDD 329 (365)
T ss_dssp -EEEEES---S-TTSCCEEEEEEECTTSCEEEE-------EEEEEC---------SSCCTTCCCEEECTTCTTEEEEECS
T ss_pred -EECCCC---C-CCCCCeEEEEEECCCCCEEEe-------eeeeec---------CCCCcccceecCCCcCCCEEEEEEc
Confidence 444321 0 0011267888775 3322110 000100 001234678899 8998877654
Q ss_pred eCCeEEEEEEECC
Q 003363 464 WGSSQVIISVNVS 476 (826)
Q Consensus 464 ~~~~~~l~~vdl~ 476 (826)
..+...+|.+|..
T Consensus 330 ~~~~v~v~~~~~~ 342 (365)
T 1jof_A 330 QEGWLEIYRWKDE 342 (365)
T ss_dssp SSCEEEEEEEETT
T ss_pred CCCeEEEEEEchh
Confidence 4567777877753
No 291
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=99.31 E-value=5.1e-12 Score=133.09 Aligned_cols=211 Identities=13% Similarity=0.062 Sum_probs=124.4
Q ss_pred CCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHH-HHHHcC
Q 003363 588 DCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAID-HVIDMG 666 (826)
Q Consensus 588 ~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~-~l~~~~ 666 (826)
..+..|.||++||.+.......|......|. .+|.|+.+|+||. |.+.. ....++++.+.+. .+.+.
T Consensus 63 ~~~~~~~lvllhG~~~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~---G~s~~-------~~~~~~~~a~~~~~~l~~~- 130 (300)
T 1kez_A 63 DGPGEVTVICCAGTAAISGPHEFTRLAGALR-GIAPVRAVPQPGY---EEGEP-------LPSSMAAVAAVQADAVIRT- 130 (300)
T ss_dssp CCSCSSEEEECCCSSTTCSTTTTHHHHHHTS-SSCCBCCCCCTTS---STTCC-------BCSSHHHHHHHHHHHHHHH-
T ss_pred CCCCCCeEEEECCCcccCcHHHHHHHHHhcC-CCceEEEecCCCC---CCCCC-------CCCCHHHHHHHHHHHHHHh-
Confidence 3456789999999776532356777777665 4699999999994 43211 1224555554443 44444
Q ss_pred CCCCCcEEEEEecchHHHHHHHHHhCC---CceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCChh--
Q 003363 667 LANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPSVE-- 741 (826)
Q Consensus 667 ~~d~~rv~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 741 (826)
.+.+++.|+|||+||.+++.++.++| ++++++|+.++........ ...+. ..................
T Consensus 131 -~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~ 203 (300)
T 1kez_A 131 -QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDA----MNAWL--EELTATLFDRETVRMDDTRL 203 (300)
T ss_dssp -CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHH----HHHHH--HHHHGGGCCCCSSCCCHHHH
T ss_pred -cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhH----HHHHH--HHHHHHHHhCcCCccchHHH
Confidence 34578999999999999999999988 4899999998764321100 00000 000000000000000011
Q ss_pred -hHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhC-CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 003363 742 -DLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK-GVETKVIVFPNDVHGIERPQSDFESFLNIGL 819 (826)
Q Consensus 742 -~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~-g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~ 819 (826)
....+...-......++++|+|+++|+ |..+++.. .. +... ...++++++++ +|.....+....+...|.+
T Consensus 204 ~~~~~~~~~~~~~~~~~i~~P~lii~G~-d~~~~~~~-~~----~~~~~~~~~~~~~i~g-gH~~~~~e~~~~~~~~i~~ 276 (300)
T 1kez_A 204 TALGAYDRLTGQWRPRETGLPTLLVSAG-EPMGPWPD-DS----WKPTWPFEHDTVAVPG-DHFTMVQEHADAIARHIDA 276 (300)
T ss_dssp HHHHHHHHHTTTCCCCCCSCCBEEEEES-SCSSCCCS-SC----CSCCCSSCCEEEEESS-CTTTSSSSCSHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCEEEEEeC-CCCCCCcc-cc----hhhhcCCCCeEEEecC-CChhhccccHHHHHHHHHH
Confidence 111111111111246789999999995 66666544 22 2222 22478999999 8987643445588899999
Q ss_pred HHHHH
Q 003363 820 WFKKY 824 (826)
Q Consensus 820 w~~~~ 824 (826)
||.+.
T Consensus 277 fl~~~ 281 (300)
T 1kez_A 277 WLGGG 281 (300)
T ss_dssp HHTCC
T ss_pred HHHhc
Confidence 99764
No 292
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.31 E-value=1.1e-12 Score=145.45 Aligned_cols=183 Identities=16% Similarity=0.266 Sum_probs=121.9
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
..+...+|||||++||..+..+ ...+|+... .+.... .+.. .....+..++|||||+.||..++++...
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg-----~V~iwd~~~--~l~~l~--~~~~-~~~~sv~svafSPDG~~LAsgs~DGtVk- 154 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNG-----NVSVFKDNK--MLTNLD--SKGN-LSSRTYHCFEWNPIESSIVVGNEDGELQ- 154 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTS-----CEEEEETTE--EEEECC--CSSC-STTTCEEEEEECSSSSCEEEEETTSEEE-
T ss_pred CcEEEEEECCCCCEEEEEeCCC-----cEEEEeCCc--eeeecc--CCCc-cccccEEEEEEcCCCCEEEEEcCCCEEE-
Confidence 4589999999999999887654 466775332 222222 1111 0111237899999999999999887654
Q ss_pred CCccCCCCCCC-------CC----CccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceE----eccCCCCCCccc
Q 003363 234 PTFSLGSTKGG-------SS----DKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ----AVKGIPKSLSVG 298 (826)
Q Consensus 234 ~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~----~l~~~~~~~~~~ 298 (826)
.|+...+... .. ..++..|+...+|+|| | ..+...+..+++||+++++.. .+. ......+.
T Consensus 155 -IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd-g-Laass~D~tVrlWd~~~~~~~~~~~tL~-~~h~~~V~ 230 (588)
T 2j04_A 155 -FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED-V-LVAALSNNSVFSMTVSASSHQPVSRMIQ-NASRRKIT 230 (588)
T ss_dssp -EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT-E-EEEEETTCCEEEECCCSSSSCCCEEEEE-CCCSSCCC
T ss_pred -EEECCCCccccccceeeeeeecccccccccEEEEEEcCC-c-EEEEeCCCeEEEEECCCCccccceeeec-ccccCcEE
Confidence 3443222210 11 1446679999999999 4 777778899999999988742 242 12345788
Q ss_pred eEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceec-CCCCccccCc
Q 003363 299 QVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-TESISSAFFP 377 (826)
Q Consensus 299 ~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L-t~~~~~~~~p 377 (826)
.++|+ |+. |+.++ ...|..+|+ .++....+ ..+...+...
T Consensus 231 svaFs--g~~----LASa~----------------~~tIkLWd~-----------------~~~~~~~~~~gh~~~V~~v 271 (588)
T 2j04_A 231 DLKIV--DYK----VVLTC----------------PGYVHKIDL-----------------KNYSISSLKTGSLENFHII 271 (588)
T ss_dssp CEEEE--TTE----EEEEC----------------SSEEEEEET-----------------TTTEEEEEECSCCSCCCEE
T ss_pred EEEEE--CCE----EEEEe----------------CCeEEEEEC-----------------CCCeEEEEEcCCCceEEEE
Confidence 99999 554 66554 137999998 66666333 3666778889
Q ss_pred ee--cCCCCEEEEEe
Q 003363 378 RF--SPDGKFLVFLS 390 (826)
Q Consensus 378 ~~--SpDG~~l~f~s 390 (826)
.| ||||+.|+-..
T Consensus 272 a~~~s~d~~~La~a~ 286 (588)
T 2j04_A 272 PLNHEKESTILLMSN 286 (588)
T ss_dssp EETTCSSCEEEEECS
T ss_pred EeeeCCCCCEEEEEc
Confidence 99 99998765433
No 293
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.31 E-value=1.2e-10 Score=125.77 Aligned_cols=269 Identities=12% Similarity=0.037 Sum_probs=153.5
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (826)
++|||++++-. ..+..+.+|+.... .....++... ..+...+|||||+.||.....+ ...
T Consensus 72 ~s~d~~~l~s~---------s~Dg~v~vWd~~~~-~~~~~~~~~~-----~~v~~~~~sp~g~~lasg~~d~-----~i~ 131 (354)
T 2pbi_B 72 WCKDKRRIVSS---------SQDGKVIVWDSFTT-NKEHAVTMPC-----TWVMACAYAPSGCAIACGGLDN-----KCS 131 (354)
T ss_dssp ECTTSSEEEEE---------ETTSEEEEEETTTC-CEEEEEECSS-----SCCCEEEECTTSSEEEEESTTS-----EEE
T ss_pred ECCCCCEEEEE---------eCCCeEEEEECCCC-CcceEEecCC-----CCEEEEEECCCCCEEEEeeCCC-----CEE
Confidence 46777766432 23456667764322 2222222222 3578899999999998764432 344
Q ss_pred Eec---CC-----ceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCC
Q 003363 184 LWS---QS-----QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 255 (826)
Q Consensus 184 i~~---~~-----~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (826)
+|. .. ....... ...+. +..++|+||++.|+..+.+.... .|+............+.....
T Consensus 132 v~~~~~~~~~~~~~~~~~~~---~h~~~------v~~~~~~~~~~~l~t~s~D~~v~--lwd~~~~~~~~~~~~h~~~v~ 200 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVA---MHTNY------LSACSFTNSDMQILTASGDGTCA--LWDVESGQLLQSFHGHGADVL 200 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEE---ECSSC------EEEEEECSSSSEEEEEETTSEEE--EEETTTCCEEEEEECCSSCEE
T ss_pred EEEEeccccccccccceeee---ccCCc------EEEEEEeCCCCEEEEEeCCCcEE--EEeCCCCeEEEEEcCCCCCeE
Confidence 441 10 1111111 11122 37899999999999888776543 333222221112222322222
Q ss_pred cceeec--CCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccC
Q 003363 256 QGDWEE--DWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNR 333 (826)
Q Consensus 256 ~~~~~~--d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~ 333 (826)
...+.+ +....+++..+..|.+||+.+++..... ......+..++|+|||+. |+..+ .
T Consensus 201 ~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~p~~~~----l~s~s---------------~ 260 (354)
T 2pbi_B 201 CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF-ETHESDVNSVRYYPSGDA----FASGS---------------D 260 (354)
T ss_dssp EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------T
T ss_pred EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCCeEEEEEeCCCCE----EEEEe---------------C
Confidence 334443 2223445556789999999988765431 234456789999999997 76665 2
Q ss_pred CCceEEEEcccccchhhhhhhhcCCCCCCcc-eecCCC--CccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEe
Q 003363 334 PCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID 410 (826)
Q Consensus 334 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt~~--~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d 410 (826)
+..|.++|+ ..+.. ..+... ........|||||+.|+..+.+ ..|.+||
T Consensus 261 D~~v~lwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----------~~i~vwd 312 (354)
T 2pbi_B 261 DATCRLYDL-----------------RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND-----------YTINVWD 312 (354)
T ss_dssp TSCEEEEET-----------------TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----------SCEEEEE
T ss_pred CCeEEEEEC-----------------CCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC-----------CcEEEEE
Confidence 336888887 33322 222222 2245678999999988766544 4589999
Q ss_pred CCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEE
Q 003363 411 WPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 471 (826)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~ 471 (826)
+.++.......+ +...+..++|+|||+.| ++...++...||
T Consensus 313 ~~~~~~~~~l~~-------------------h~~~v~~l~~spdg~~l-~sgs~D~~v~vW 353 (354)
T 2pbi_B 313 VLKGSRVSILFG-------------------HENRVSTLRVSPDGTAF-CSGSWDHTLRVW 353 (354)
T ss_dssp TTTCSEEEEECC-------------------CSSCEEEEEECTTSSCE-EEEETTSEEEEE
T ss_pred CCCCceEEEEEC-------------------CCCcEEEEEECCCCCEE-EEEcCCCCEEec
Confidence 877553211100 11234577899999855 555566666665
No 294
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.31 E-value=8.5e-12 Score=135.72 Aligned_cols=233 Identities=9% Similarity=0.064 Sum_probs=135.5
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~ 234 (826)
.+...+|||||++||..... +.-.+|.+.. +....+..+ .+..+.| ..++|+|||+.|+..+.+
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d--~~i~iw~~~~-~~~~~~~~~-~~h~~~v------~~~~~s~~~~~l~s~s~d------ 76 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTAT--NQVELYEQDG-NGWKHARTF-SDHDKIV------TCVDWAPKSNRIVTCSQD------ 76 (377)
T ss_dssp CCSCCEECSSSSEEECCCSS--SCBCEEEEET-TEEEECCCB-CCCSSCE------EEEEECTTTCCEEEEETT------
T ss_pred cEEEEEECCCCCEEEEecCC--CEEEEEEccC-CceEEEEEE-ecCCceE------EEEEEeCCCCEEEEEeCC------
Confidence 47788999999999875432 3333443332 211221111 1222333 789999999999887543
Q ss_pred CccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCc----eEeccCCCCCCccceEEEeeCCCCCc
Q 003363 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLH 310 (826)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~----~~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (826)
..|.+||+.+++ ...+ ......+..++|+|||+.
T Consensus 77 --------------------------------------~~v~vwd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~-- 114 (377)
T 3dwl_C 77 --------------------------------------RNAYVYEKRPDGTWKQTLVL--LRLNRAATFVRWSPNEDK-- 114 (377)
T ss_dssp --------------------------------------SSEEEC------CCCCEEEC--CCCSSCEEEEECCTTSSC--
T ss_pred --------------------------------------CeEEEEEcCCCCceeeeeEe--cccCCceEEEEECCCCCE--
Confidence 468899988876 3334 344557789999999998
Q ss_pred cEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc----ceecCC-CCccccCceecCCCCE
Q 003363 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP----VVNLTE-SISSAFFPRFSPDGKF 385 (826)
Q Consensus 311 ~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~Lt~-~~~~~~~p~~SpDG~~ 385 (826)
|+..+ .+..|.++|+ .+++ ...+.. +...+....|+|||++
T Consensus 115 --l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 115 --FAVGS---------------GARVISVCYF-----------------EQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp --CEEEE---------------SSSCEEECCC----------------------CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred --EEEEe---------------cCCeEEEEEE-----------------CCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 88776 2336778887 3333 456665 6777889999999999
Q ss_pred EEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccc--------eeeeeeeeeccCCCCCcccccCCCCCCccccCCCE
Q 003363 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEK--------IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 457 (826)
Q Consensus 386 l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~ 457 (826)
|+..+.+ ..|++||+.+++....... ........ . +...+..+.|+|||+.
T Consensus 161 l~~~~~d-----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 161 LAAGCAD-----------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--P--------SGGWVHAVGFSPSGNA 219 (377)
T ss_dssp EEEEESS-----------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--C--------CSSSEEEEEECTTSSC
T ss_pred EEEEeCC-----------CEEEEEEEEecccCCCccccccccccchhhhhhcc--c--------CCceEEEEEECCCCCE
Confidence 8877754 3488888765432111000 01111111 0 1223557789999996
Q ss_pred EEEEEEeCCeEEEEEEECCCCcE-----EEecCCCCCeeeEEEeecCCEEE
Q 003363 458 MLLSSIWGSSQVIISVNVSSGEL-----LRITPAESNFSWSLLTLDGDNII 503 (826)
Q Consensus 458 l~~~~~~~~~~~l~~vdl~tg~~-----~~lt~~~~~~~~~~~s~dg~~l~ 503 (826)
|+. ...++. |..+|+.+++. ..+......+....|+++++.++
T Consensus 220 l~~-~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 267 (377)
T 3dwl_C 220 LAY-AGHDSS--VTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVA 267 (377)
T ss_dssp EEE-EETTTE--EC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEE
T ss_pred EEE-EeCCCc--EEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEE
Confidence 654 444454 44456666653 33444444566678899886543
No 295
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=99.31 E-value=1.9e-11 Score=123.77 Aligned_cols=199 Identities=12% Similarity=0.102 Sum_probs=125.7
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCC---cEEEEECCCCCCC--Cchhhh-h-cCC-------CC-CC----cchHH
Q 003363 593 PLIVVLHGGPHSVSLSSYSKSLAFLSSVG---YSLLIVNYRGSLG--FGEEAL-Q-SLP-------GK-VG----SQDVN 653 (826)
Q Consensus 593 P~vv~~HGg~~~~~~~~~~~~~~~la~~G---~~Vl~~d~rG~~g--~G~~~~-~-~~~-------~~-~~----~~~~~ 653 (826)
+.||++||.+.+ ...|..++..|++.| +.|+.+|.++.+. +..... . ..| .+ .+ ....+
T Consensus 5 ~pvv~iHG~~~~--~~~~~~~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a~ 82 (250)
T 3lp5_A 5 APVIMVPGSSAS--QNRFDSLITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQAV 82 (250)
T ss_dssp CCEEEECCCGGG--HHHHHHHHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHHH
T ss_pred CCEEEECCCCCC--HHHHHHHHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHHH
Confidence 458889996654 557888899998876 6777776555321 000000 0 000 00 00 12357
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhC-----CCceeEEEecCCccchhhhccCCCCCCchhhhhccC
Q 003363 654 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA-----PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS 728 (826)
Q Consensus 654 D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~-----p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 728 (826)
++.++++.+.++. +.+++.|+||||||.++..++.++ +++++.+|++++..+..... +.
T Consensus 83 ~l~~~~~~l~~~~--~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~-----~~--------- 146 (250)
T 3lp5_A 83 WLNTAFKALVKTY--HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTS-----TT--------- 146 (250)
T ss_dssp HHHHHHHHHHTTS--CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCC-----SS---------
T ss_pred HHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCccccc-----cc---------
Confidence 7788888887763 457899999999999999998877 67899999887755422110 00
Q ss_pred cCCccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeC----CCCCCCcHHHHHHHHHHHhCCCCEEEEEeC--CCCC
Q 003363 729 KGKDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGA----QDLRVPVSNGLQYARALREKGVETKVIVFP--NDVH 802 (826)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~----~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p--~~~H 802 (826)
........+... ...+.+ ++|+|+|+|+ .|..||...++.+...++......+.+.+. +++|
T Consensus 147 ---------~~~~~~~~l~~~--~~~lp~-~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~~~~~~~~~v~g~~a~H 214 (250)
T 3lp5_A 147 ---------AKTSMFKELYRY--RTGLPE-SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQVKHFTEITVTGANTAH 214 (250)
T ss_dssp ---------CCCHHHHHHHHT--GGGSCT-TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTTSSEEEEEECTTTTBSS
T ss_pred ---------ccCHHHHHHHhc--cccCCC-CceEEEEEecCCCCCCceeeHHHHHHHHHHhcccccceEEEEEeCCCCch
Confidence 001112222211 122233 6899999999 999999999988877776544445555555 4669
Q ss_pred CCCCCCCHHHHHHHHHHHHHH
Q 003363 803 GIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 803 ~~~~~~~~~~~~~~i~~w~~~ 823 (826)
..... +. ++.+.|.+||.+
T Consensus 215 ~~l~e-~~-~v~~~I~~FL~~ 233 (250)
T 3lp5_A 215 SDLPQ-NK-QIVSLIRQYLLA 233 (250)
T ss_dssp CCHHH-HH-HHHHHHHHHTSC
T ss_pred hcchh-CH-HHHHHHHHHHhc
Confidence 77543 33 678888888753
No 296
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.30 E-value=1.1e-10 Score=125.36 Aligned_cols=249 Identities=12% Similarity=0.080 Sum_probs=139.8
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|||||+.|+..+..+ .+.+|+ .++..+.+. +..+.| ..++|||||+.|+..+.+...
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~---~h~~~v------~~v~~sp~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDK-----TLRLWDLRTGTTYKRFV---GHQSEV------YSVAFSPDNRQILSAGAEREI 142 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTS-----EEEEEETTSSCEEEEEE---CCCSCE------EEEEECSSTTEEEEEETTSCE
T ss_pred CceEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEEEc---CCCCcE------EEEEECCCCCEEEEEcCCCEE
Confidence 4588899999999998766543 577773 333333222 222223 789999999999988877654
Q ss_pred CCCCccCCCCC--CCCCCccCCCCCCcceeecCCC----------ccCCCccCceEEEEEccCCceEeccCCCCCCccce
Q 003363 232 SKPTFSLGSTK--GGSSDKDCNSWKGQGDWEEDWG----------ETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQ 299 (826)
Q Consensus 232 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~g----------~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~ 299 (826)
.. |+..... .......+..+.....|.++.. ...++.....|.+||........+ ......+..
T Consensus 143 ~~--wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~--~~h~~~v~~ 218 (343)
T 2xzm_R 143 KL--WNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTF--KAHESNVNH 218 (343)
T ss_dssp EE--EESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEE--ECCSSCEEE
T ss_pred EE--EeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEE--cCccccceE
Confidence 42 3321100 0011123444455556666531 223344567899999554434444 233456788
Q ss_pred EEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCcee
Q 003363 300 VVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRF 379 (826)
Q Consensus 300 ~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~ 379 (826)
++|+|||+. |+..+ .+..|+++|+. ..............+...+|
T Consensus 219 ~~~s~~g~~----l~sgs---------------~dg~v~iwd~~----------------~~~~~~~~~~~~~~v~~v~~ 263 (343)
T 2xzm_R 219 LSISPNGKY----IATGG---------------KDKKLLIWDIL----------------NLTYPQREFDAGSTINQIAF 263 (343)
T ss_dssp EEECTTSSE----EEEEE---------------TTCEEEEEESS----------------CCSSCSEEEECSSCEEEEEE
T ss_pred EEECCCCCE----EEEEc---------------CCCeEEEEECC----------------CCcccceeecCCCcEEEEEE
Confidence 999999997 77665 33468888872 12222222222344778899
Q ss_pred cCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEE
Q 003363 380 SPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTML 459 (826)
Q Consensus 380 SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~ 459 (826)
||||+.|+. +.+ ..+.+||+.++....+..-.. .++... ....+ +...+..++|+|||+.|
T Consensus 264 sp~~~~la~-~~d-----------~~v~iw~~~~~~~~~~~~~~~--~~~~~~---~~~~~-~~~~v~~~~~sp~g~~l- 324 (343)
T 2xzm_R 264 NPKLQWVAV-GTD-----------QGVKIFNLMTQSKAPVCTIEA--EPITKA---EGQKG-KNPQCTSLAWNALGKKL- 324 (343)
T ss_dssp CSSSCEEEE-EES-----------SCEEEEESSSCCSCSEEECCC--CSGGGB---TTBCC-SCCCEEEEEECSSSCCE-
T ss_pred CCCCCEEEE-ECC-----------CCEEEEEeCCCCCCceEEeec--Ccchhh---hhhcC-CCCceEEEEECCCCCeE-
Confidence 999987753 322 238888887755422100000 000000 00000 11234567899999866
Q ss_pred EEEEeCCeEEEEEEE
Q 003363 460 LSSIWGSSQVIISVN 474 (826)
Q Consensus 460 ~~~~~~~~~~l~~vd 474 (826)
++...++...+|.++
T Consensus 325 ~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 325 FAGFTDGVIRTFSFE 339 (343)
T ss_dssp EEEETTSEEEEEEEE
T ss_pred EEecCCceEEEEEEE
Confidence 445556666666543
No 297
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.30 E-value=9.3e-11 Score=130.46 Aligned_cols=279 Identities=14% Similarity=0.116 Sum_probs=161.5
Q ss_pred cccEEEEeCCC-CCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecC-CCCeEEEEeecC
Q 003363 154 TGASAVVPSPS-GSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEP 229 (826)
Q Consensus 154 ~~~~~~~~SPd-G~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSP-Dg~~ia~~~~~~ 229 (826)
..+...+|+|+ ++.||..+..+ .+.+|+ .++....... .+..+.| .++.|+| |++.|+..+.+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~-~gH~~~V------~~l~f~p~~~~~l~s~s~D~ 187 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKG-IGAGGSI------TGLKFNPLNTNQFYASSMEG 187 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTS-----CEEEECSSCCSCCEEECC-CSSSCCC------CEEEECSSCTTEEEEECSSS
T ss_pred CCEEEEEEeCCCCCEEEEEeCCC-----EEEEEECCCCCceeEEEc-cCCCCCE------EEEEEeCCCCCEEEEEeCCC
Confidence 35889999995 55676655433 467773 3333333322 2334445 8999998 688888887776
Q ss_pred CCCCCCccCCCCCC--CCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC
Q 003363 230 SPSKPTFSLGSTKG--GSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 307 (826)
Q Consensus 230 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~ 307 (826)
.... |+...... .........+.....|.++....+++.....|.+||+.+..+..+ ......+..++|+|+++
T Consensus 188 ~v~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~--~~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 188 TTRL--QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNL--RMHKKKVTHVALNPCCD 263 (435)
T ss_dssp CEEE--EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCS--BCCSSCEEEEEECTTCS
T ss_pred EEEE--eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEE--ecccceEEeeeecCCCc
Confidence 5543 33211110 011112233445667888855555666778999999988776666 33445678899999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEE
Q 003363 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 387 (826)
Q Consensus 308 ~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~ 387 (826)
. ++.++. .+..|.++|+.... ..........+...+....|||||++|+
T Consensus 264 ~----~~~s~s--------------~d~~v~iwd~~~~~-------------~~~~~~~~~~h~~~v~~~~~spdg~~l~ 312 (435)
T 4e54_B 264 W----FLATAS--------------VDQTVKIWDLRQVR-------------GKASFLYSLPHRHPVNAACFSPDGARLL 312 (435)
T ss_dssp S----EEEEEE--------------TTSBCCEEETTTCC-------------SSSCCSBCCBCSSCEEECCBCTTSSEEE
T ss_pred e----EEEEec--------------CcceeeEEeccccc-------------ccceEEEeeeccccccceeECCCCCeeE
Confidence 8 777652 22367778872100 0111222234556678899999999998
Q ss_pred EEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeC--
Q 003363 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG-- 465 (826)
Q Consensus 388 f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~-- 465 (826)
..+.+ ..|.+||+.++...... ..... .... ........|++++..+++.....
T Consensus 313 s~~~D-----------~~i~iwd~~~~~~~~~~---------~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~ 368 (435)
T 4e54_B 313 TTDQK-----------SEIRVYSASQWDCPLGL---------IPHPH-RHFQ---HLTPIKAAWHPRYNLIVVGRYPDPN 368 (435)
T ss_dssp EEESS-----------SCEEEEESSSSSSEEEE---------CCCCC-CCCS---SSCCCBCEECSSSSCEEEECCCCTT
T ss_pred EEcCC-----------CEEEEEECCCCccceEE---------ecccc-cccc---cceeEEEEEcCCCCEEEEEEcCCCC
Confidence 76654 35889998775532110 00000 0000 01123456778777665543322
Q ss_pred -------CeEEEEEEECCCCcEEEecC-CCC-C-eeeEEEeecCCEEE
Q 003363 466 -------SSQVIISVNVSSGELLRITP-AES-N-FSWSLLTLDGDNII 503 (826)
Q Consensus 466 -------~~~~l~~vdl~tg~~~~lt~-~~~-~-~~~~~~s~dg~~l~ 503 (826)
....|..+|..+|+...... ... . .+...|+++|..|+
T Consensus 369 ~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~la 416 (435)
T 4e54_B 369 FKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLA 416 (435)
T ss_dssp SCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEE
T ss_pred eEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEE
Confidence 12346777888888765433 222 2 23336899988654
No 298
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.29 E-value=1.7e-10 Score=121.85 Aligned_cols=274 Identities=13% Similarity=0.058 Sum_probs=156.3
Q ss_pred cCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003363 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (826)
Q Consensus 103 ~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (826)
.++|||+.++... ....+.++++... .....+.... ..+...+|+|||+.|+.....+ .+
T Consensus 30 ~~s~~~~~l~s~~---------~dg~i~iw~~~~~-~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~~d~-----~i 89 (312)
T 4ery_A 30 KFSPNGEWLASSS---------ADKLIKIWGAYDG-KFEKTISGHK-----LGISDVAWSSDSNLLVSASDDK-----TL 89 (312)
T ss_dssp EECTTSSEEEEEE---------TTSCEEEEETTTC-CEEEEECCCS-----SCEEEEEECTTSSEEEEEETTS-----EE
T ss_pred EECCCCCEEEEee---------CCCeEEEEeCCCc-ccchhhccCC-----CceEEEEEcCCCCEEEEECCCC-----EE
Confidence 3489998776542 2234555554221 1122222222 4588999999999999876543 56
Q ss_pred EEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceee
Q 003363 183 ELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (826)
Q Consensus 183 ~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (826)
.+|+ .++....+.. ..+.| ..+.|+||++.|+..+.+.... .|+............+........|.
T Consensus 90 ~vwd~~~~~~~~~~~~---~~~~v------~~~~~~~~~~~l~s~~~d~~i~--iwd~~~~~~~~~~~~~~~~v~~~~~~ 158 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKG---HSNYV------FCCNFNPQSNLIVSGSFDESVR--IWDVKTGKCLKTLPAHSDPVSAVHFN 158 (312)
T ss_dssp EEEETTTCCEEEEEEC---CSSCE------EEEEECSSSSEEEEEETTSCEE--EEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEEECCCCcEEEEEcC---CCCCE------EEEEEcCCCCEEEEEeCCCcEE--EEECCCCEEEEEecCCCCcEEEEEEc
Confidence 6773 3333333321 11222 7889999999999888776433 33322222112222333344456778
Q ss_pred cCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEE
Q 003363 261 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (826)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (826)
++....+++.....|.+||+.+++............+..++|+|||+. |+..+ .+..|.++
T Consensus 159 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~---------------~d~~i~iw 219 (312)
T 4ery_A 159 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY----ILAAT---------------LDNTLKLW 219 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE----EEEEE---------------TTTEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE----EEEEc---------------CCCeEEEE
Confidence 775445566667889999998877543211223345677899999997 77665 23478888
Q ss_pred EcccccchhhhhhhhcCCCCCCc-ceecCCCCcc--ccCceec-CCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCC
Q 003363 341 RVSLYKSEASELELKESSSEDLP-VVNLTESISS--AFFPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (826)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~--~~~p~~S-pDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~ 416 (826)
|+ .+++ ...+..+... .....++ ++|++|+..+.+ ..|++||+.+++.
T Consensus 220 d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d-----------g~i~vwd~~~~~~ 271 (312)
T 4ery_A 220 DY-----------------SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED-----------NLVYIWNLQTKEI 271 (312)
T ss_dssp ET-----------------TTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT-----------SCEEEEETTTCCE
T ss_pred EC-----------------CCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC-----------CEEEEEECCCchh
Confidence 88 4443 3344433222 2334455 567766544332 4589999887553
Q ss_pred CCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEE-eCCeEEEEEE
Q 003363 417 FSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI-WGSSQVIISV 473 (826)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~-~~~~~~l~~v 473 (826)
.....+ +...+..++|+|+++.|+..+. .++...+|..
T Consensus 272 ~~~~~~-------------------h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 272 VQKLQG-------------------HTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp EEEECC-------------------CSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred hhhhhc-------------------cCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 211111 1112346789999986654332 3455566653
No 299
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.29 E-value=1.3e-12 Score=147.53 Aligned_cols=218 Identities=15% Similarity=0.102 Sum_probs=131.9
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cchHHHHHH-HHCCcEEEEECCCCC-CCCchhhhhcCCCCCCcchH
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFL-SSVGYSLLIVNYRGS-LGFGEEALQSLPGKVGSQDV 652 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~~~~~~~~l-a~~G~~Vl~~d~rG~-~g~G~~~~~~~~~~~~~~~~ 652 (826)
+...+|.|.+....++.|+||++|||++..... .+....... ...|++|+.+|||.. .||+........ ..+...+
T Consensus 86 l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~~-~~~n~gl 164 (522)
T 1ukc_A 86 LFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQN-GDLNAGL 164 (522)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHHS-SCTTHHH
T ss_pred CEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhcccc-CCCChhH
Confidence 455788887544456789999999998765432 233221111 256999999999942 233322211111 1234458
Q ss_pred HHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHhC----CCceeEEEecCCccchhhhccCCCCCCc---hh
Q 003363 653 NDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPLCNLALMVGTTDIPDW---CY 722 (826)
Q Consensus 653 ~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~~----p~~~~a~v~~~p~~~~~~~~~~~~~~~~---~~ 722 (826)
.|+.++++|+.++. ..|+++|.|+|+|.||+++..++... +.+|+++|+.+|...... ......+ .+
T Consensus 165 ~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~---~~~~~~~~~~~~ 241 (522)
T 1ukc_A 165 LDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQR---TVSEMEFQFERF 241 (522)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCC---CSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcC---CHHHHHHHHHHH
Confidence 99999999998862 37999999999999999887776643 568999999998653211 0000011 11
Q ss_pred hhhccCcCCccCCCCCChhhHHHHhhcCcccc---------cCCCCCc--EEEEEeCCCCCCCcHHHHHHHHHHHhCCCC
Q 003363 723 VESYGSKGKDSFTESPSVEDLTRFHSKSPISH---------ISKVKTP--TIFLLGAQDLRVPVSNGLQYARALREKGVE 791 (826)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~---------~~~i~~P--vLii~G~~D~~vp~~~~~~~~~~l~~~g~~ 791 (826)
....+.. ...+..+.++..++... ......| .+.++...|..+.+++..++.++-+..+++
T Consensus 242 ~~~~gc~--------~~~~~~~~Lr~~~~~~l~~a~~~~~~~~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g~~~~vp 313 (522)
T 1ukc_A 242 VNDTGCS--------SARDSLECLREQDIATIQKGNTGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGNFIKVP 313 (522)
T ss_dssp HHHTTCT--------TCSSHHHHHHHSCHHHHHHHSSCCCCTTCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHTCSCCCC
T ss_pred HHHcCCC--------CHHHHHHHHHcCCHHHHHHHHHhccccccccCcccccccccccCCcccCCCHHHHHhcCCCCCCC
Confidence 1222211 01122223332222111 1112233 556677778777777777777766666778
Q ss_pred EEEEEeCCCCCCCC
Q 003363 792 TKVIVFPNDVHGIE 805 (826)
Q Consensus 792 ~~~~~~p~~~H~~~ 805 (826)
+-+-...+++|.+.
T Consensus 314 ~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 314 VLVGDDTDEGSNFA 327 (522)
T ss_dssp EEEEEETBGGGGTS
T ss_pred EEEEeecchhHHhh
Confidence 88778889999775
No 300
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.29 E-value=1.3e-10 Score=128.12 Aligned_cols=288 Identities=15% Similarity=0.118 Sum_probs=168.6
Q ss_pred ccEEEEeCCCCC-eEEEEecCCCCCCeEEEEe---cCCc------eeEEEecCCCcccccc-CCCcccceeecCCCCeEE
Q 003363 155 GASAVVPSPSGS-KLLVVRNPENESPIQFELW---SQSQ------LEKEFHVPQTVHGSVY-ADGWFEGISWNSDETLIA 223 (826)
Q Consensus 155 ~~~~~~~SPdG~-~la~~~~~~~~~~~~~~i~---~~~~------~~~~~~~~~~~~g~v~-~~~~~~~~~wSPDg~~ia 223 (826)
.+...+|||||+ .||..... +.-.+|.+. ..++ ...........+...- ....+..++|||||+.|+
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 124 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKN--SVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIV 124 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETB--TEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEE
T ss_pred ceEEEEECCCCCcEEEEecCC--ceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEE
Confidence 588899999999 88876543 333344441 1122 1222221111110000 011238999999999999
Q ss_pred EEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCc-------
Q 003363 224 YVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLS------- 296 (826)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~------- 296 (826)
..+.+.... .|+ ...........+........|.++....++......|.+||+.+++..... ......
T Consensus 125 ~~~~dg~i~--i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~ 200 (425)
T 1r5m_A 125 TGVENGELR--LWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHF-ELKETGGSSINAE 200 (425)
T ss_dssp EEETTSCEE--EEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEE-CCC----------
T ss_pred EEeCCCeEE--EEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEe-eccccCccceeec
Confidence 987765433 232 111111222334445556778888555566666789999999888765431 111111
Q ss_pred --------cceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecC
Q 003363 297 --------VGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT 368 (826)
Q Consensus 297 --------~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt 368 (826)
+..+.|+|++. ++..+ ....|+.+|+. .......+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~-----~~~~~---------------~~g~i~~~d~~----------------~~~~~~~~~ 244 (425)
T 1r5m_A 201 NHSGDGSLGVDVEWVDDDK-----FVIPG---------------PKGAIFVYQIT----------------EKTPTGKLI 244 (425)
T ss_dssp -----CCCBSCCEEEETTE-----EEEEC---------------GGGCEEEEETT----------------CSSCSEEEC
T ss_pred cccCCcceeeEEEEcCCCE-----EEEEc---------------CCCeEEEEEcC----------------CCceeeeec
Confidence 67889999855 55444 22378999982 223344555
Q ss_pred CCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCC
Q 003363 369 ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILS 448 (826)
Q Consensus 369 ~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~ 448 (826)
.+...+....|+|||+.|+..+.+ ..|++||+.++........ ....+..
T Consensus 245 ~~~~~i~~~~~~~~~~~l~~~~~d-----------~~i~i~d~~~~~~~~~~~~-------------------~~~~i~~ 294 (425)
T 1r5m_A 245 GHHGPISVLEFNDTNKLLLSASDD-----------GTLRIWHGGNGNSQNCFYG-------------------HSQSIVS 294 (425)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETT-----------SCEEEECSSSBSCSEEECC-------------------CSSCEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCC-----------CEEEEEECCCCccceEecC-------------------CCccEEE
Confidence 666778889999999988766644 3588999877544221110 1113446
Q ss_pred CccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC-CCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 449 NPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 449 ~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~-~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
+.|+||+ ++++...++ .|..+|+.+++....... ...+....|+++++.++....+ ..|.+.++..
T Consensus 295 ~~~~~~~--~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~i~~~~~ 361 (425)
T 1r5m_A 295 ASWVGDD--KVISCSMDG--SVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD----GQVNVYDLKK 361 (425)
T ss_dssp EEEETTT--EEEEEETTS--EEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT----SCEEEEECHH
T ss_pred EEECCCC--EEEEEeCCC--cEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC----CeEEEEECCC
Confidence 7899999 444444343 566778888776655443 4456667889998866655432 2477777654
No 301
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.29 E-value=4.6e-11 Score=144.24 Aligned_cols=264 Identities=9% Similarity=0.047 Sum_probs=164.4
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|||||++||+....+ .+.+|+ .+...+... ...+.| ..+.|||||++|+..+.+...
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g-----~v~iwd~~~~~~~~~~~---~~~~~v------~~~~~s~~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSG-----RVEIWNYETQVEVRSIQ---VTETPV------RAGKFIARKNWIIVGSDDFRI 79 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEETTTTEEEEEEE---CCSSCE------EEEEEEGGGTEEEEEETTSEE
T ss_pred CceEEEEECCCCCEEEEEeCCC-----EEEEEECCCCceEEEEe---cCCCcE------EEEEEeCCCCEEEEEeCCCeE
Confidence 4588999999999999886543 566773 343333333 222223 799999999999998876543
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCC-ceEeccCCCCCCccceEEEee-CCCCC
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-EVQAVKGIPKSLSVGQVVWAP-LNEGL 309 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g-~~~~l~~~~~~~~~~~~~wSP-Dg~~~ 309 (826)
. .|+............+........|.++....+++.....|.+||+.++ ...... ......+..++|+| ||+.
T Consensus 80 ~--vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~- 155 (814)
T 3mkq_A 80 R--VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF-EGHEHFVMCVAFNPKDPST- 155 (814)
T ss_dssp E--EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEE-ECCSSCEEEEEEETTEEEE-
T ss_pred E--EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEE-cCCCCcEEEEEEEcCCCCE-
Confidence 3 3332222222223334555567788888555566667789999999876 333321 23345678899999 7776
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCC-CccccCceecC--CCCEE
Q 003363 310 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES-ISSAFFPRFSP--DGKFL 386 (826)
Q Consensus 310 ~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~-~~~~~~p~~Sp--DG~~l 386 (826)
|+..+ .+..|+++|+. .......+..+ ...+....|+| ||+.|
T Consensus 156 ---l~~~~---------------~dg~v~vwd~~----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 156 ---FASGC---------------LDRTVKVWSLG----------------QSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp ---EEEEE---------------TTSEEEEEETT----------------CSSCSEEEECCCTTCCCEEEECCSTTCCEE
T ss_pred ---EEEEe---------------CCCeEEEEECC----------------CCcceeEEecCCCCCEEEEEEEECCCCCEE
Confidence 66655 33478888872 22233334333 35678899999 99988
Q ss_pred EEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCC
Q 003363 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (826)
Q Consensus 387 ~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (826)
+..+.+ ..|.+||+.++..... +.. +...+..+.|+|||+.|+ +...++
T Consensus 202 ~~~~~d-----------g~i~~~d~~~~~~~~~----------~~~---------~~~~v~~~~~~~~~~~l~-~~~~dg 250 (814)
T 3mkq_A 202 ITASDD-----------LTIKIWDYQTKSCVAT----------LEG---------HMSNVSFAVFHPTLPIII-SGSEDG 250 (814)
T ss_dssp EEECTT-----------SEEEEEETTTTEEEEE----------EEC---------CSSCEEEEEECSSSSEEE-EEETTS
T ss_pred EEEeCC-----------CEEEEEECCCCcEEEE----------EcC---------CCCCEEEEEEcCCCCEEE-EEeCCC
Confidence 766643 4689999876543111 000 111344678999999554 444344
Q ss_pred eEEEEEEECCCCcEEEecC-CCCCeeeEEEeecCCEE
Q 003363 467 SQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNI 502 (826)
Q Consensus 467 ~~~l~~vdl~tg~~~~lt~-~~~~~~~~~~s~dg~~l 502 (826)
. |..+|+.+++...... ....+....+++++..+
T Consensus 251 ~--v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 251 T--LKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp C--EEEEETTTCSEEEEECCSSSSEEEEEECTTCGGG
T ss_pred e--EEEEECCCCcEEEEeecCCCcEEEEEEccCCCce
Confidence 4 5556888877655443 33345556778887754
No 302
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.29 E-value=1.2e-10 Score=123.76 Aligned_cols=272 Identities=11% Similarity=0.115 Sum_probs=158.8
Q ss_pred cccEEEEeCCCC-CeEEEEecCCCCCCeEEEEec---CC-ceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeec
Q 003363 154 TGASAVVPSPSG-SKLLVVRNPENESPIQFELWS---QS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 228 (826)
Q Consensus 154 ~~~~~~~~SPdG-~~la~~~~~~~~~~~~~~i~~---~~-~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~ 228 (826)
..+...+|+|++ +.|+..+.. + .+.+|+ .. ........-.+..+.| ..+.|+|||++|+..+.+
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D--~---~v~~W~~~~~~~~~~~~~~~~~~h~~~v------~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRD--K---TLISWKLTGDDQKFGVPVRSFKGHSHIV------QDCTLTADGAYALSASWD 86 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETT--S---EEEEEEEEEETTEEEEEEEEEECCSSCE------EEEEECTTSSEEEEEETT
T ss_pred ceEEEEEccCCCccEEEEecCC--c---cEEEecCCCCCccccccceEEeCCcccE------EEEEECCCCCEEEEEeCC
Confidence 458889999987 556555443 2 455552 11 1111111112222333 789999999999998877
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCC
Q 003363 229 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 308 (826)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~ 308 (826)
...+ .|+............+........|.++....+++..+..|.+||+.+..+..+ ......+..+.|+|+++.
T Consensus 87 ~~v~--~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~--~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 87 KTLR--LWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATL--LGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp SEEE--EEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEE--CCCSSCEEEEEECCC---
T ss_pred CEEE--EEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE--eccCCcEEEEEEccCCCC
Confidence 7544 333222222222334445555667887755556666778999999988777776 344456778899996431
Q ss_pred Ccc--EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCE
Q 003363 309 LHQ--YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKF 385 (826)
Q Consensus 309 ~~~--~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~ 385 (826)
... .|+..+ .+..|..+|+ ...+ ...+..+...+....|||||++
T Consensus 163 ~~~~~~l~s~~---------------~d~~i~~wd~-----------------~~~~~~~~~~~h~~~v~~~~~sp~g~~ 210 (319)
T 3frx_A 163 DDDSVTIISAG---------------NDKMVKAWNL-----------------NQFQIEADFIGHNSNINTLTASPDGTL 210 (319)
T ss_dssp ---CCEEEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCCSCEEEEEECTTSSE
T ss_pred CCCccEEEEEe---------------CCCEEEEEEC-----------------CcchhheeecCCCCcEEEEEEcCCCCE
Confidence 000 044333 3347888888 3333 3456667777888999999999
Q ss_pred EEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeC
Q 003363 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 465 (826)
Q Consensus 386 l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~ 465 (826)
|+..+.+ ..|.+||+.++...... .. ...+..++|+|||..|+... .
T Consensus 211 l~s~~~d-----------g~i~iwd~~~~~~~~~~----------~~----------~~~v~~~~~sp~~~~la~~~--~ 257 (319)
T 3frx_A 211 IASAGKD-----------GEIMLWNLAAKKAMYTL----------SA----------QDEVFSLAFSPNRYWLAAAT--A 257 (319)
T ss_dssp EEEEETT-----------CEEEEEETTTTEEEEEE----------EC----------CSCEEEEEECSSSSEEEEEE--T
T ss_pred EEEEeCC-----------CeEEEEECCCCcEEEEe----------cC----------CCcEEEEEEcCCCCEEEEEc--C
Confidence 8866644 46899998775432110 00 01234678999998665432 3
Q ss_pred CeEEEEEEECCCCcEE-EecCC--------CCCeeeEEEeecCCEEEEEEe
Q 003363 466 SSQVIISVNVSSGELL-RITPA--------ESNFSWSLLTLDGDNIIAVSS 507 (826)
Q Consensus 466 ~~~~l~~vdl~tg~~~-~lt~~--------~~~~~~~~~s~dg~~l~~~~s 507 (826)
....+| +++++... .+... ...+....|+|||+.|+....
T Consensus 258 ~~i~v~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~ 306 (319)
T 3frx_A 258 TGIKVF--SLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYT 306 (319)
T ss_dssp TEEEEE--EETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEET
T ss_pred CCcEEE--EeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeec
Confidence 444455 44444332 22211 112334578999987765543
No 303
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.29 E-value=2.1e-10 Score=127.75 Aligned_cols=268 Identities=10% Similarity=0.081 Sum_probs=145.0
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCc---------eeEEEecCCCccc------cccCCCcccceeec
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQ---------LEKEFHVPQTVHG------SVYADGWFEGISWN 216 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~---------~~~~~~~~~~~~g------~v~~~~~~~~~~wS 216 (826)
..+...+|||||++||.....+ .+.+|+ .+. ......+. +... .+-.++.+..+.|+
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGG-----RVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTS-----EEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCCCCEEEEC
T ss_pred CcEEEEEECCCCCEEEEEcCCC-----eEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCceEEEEEc
Confidence 4589999999999999876543 455662 222 00111111 1110 00000123899999
Q ss_pred CCC--CeEEEEeecCCCCCCCccCCCC------C---CC-----------------------------CCCccCCCCCCc
Q 003363 217 SDE--TLIAYVAEEPSPSKPTFSLGST------K---GG-----------------------------SSDKDCNSWKGQ 256 (826)
Q Consensus 217 PDg--~~ia~~~~~~~~~~~~~~~~~~------~---~~-----------------------------~~~~~~~~~~~~ 256 (826)
|++ ..|+..+.+.....+....... . .+ .....+......
T Consensus 103 ~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 103 PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 999 7788877766543222111000 0 00 001234555567
Q ss_pred ceeecCCCccCCCccCceEEEEEcc-CCceEec-c-----CCCCCCccceEEEeeCC-CCCccEEEEEeecCcceeeeee
Q 003363 257 GDWEEDWGETYAGKRQPSLFVININ-SGEVQAV-K-----GIPKSLSVGQVVWAPLN-EGLHQYLVFVGWSSETRKLGIK 328 (826)
Q Consensus 257 ~~~~~d~g~~~~~~~~~~l~v~d~~-~g~~~~l-~-----~~~~~~~~~~~~wSPDg-~~~~~~lvf~~~~~~~~~~g~~ 328 (826)
..|.++....+++ .+..|.+||+. +++...+ . -......+..++|+||| +. |+..+
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~----l~s~~----------- 246 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNT----FVYSS----------- 246 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTE----EEEEE-----------
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcE----EEEEe-----------
Confidence 7888884334444 68899999998 3433321 0 01223457789999999 54 44444
Q ss_pred eeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-----ceecCCCCc------------cccCceecCCCCEEEEEec
Q 003363 329 YCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-----VVNLTESIS------------SAFFPRFSPDGKFLVFLSA 391 (826)
Q Consensus 329 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~Lt~~~~------------~~~~p~~SpDG~~l~f~s~ 391 (826)
.+..|.++|+ .++. ...+..+.. .+....|+|||++|+..+.
T Consensus 247 ----~dg~i~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 247 ----SKGTIRLCDM-----------------RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp ----TTSCEEEEET-----------------TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred ----CCCeEEEEEC-----------------cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 2347888887 3333 344544443 6788999999999885543
Q ss_pred cCCCCCCCCcccceEEEEeCCC-CCCCCcccceeeeeeee-eccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEE
Q 003363 392 KSSVDSGAHSATDSLHRIDWPT-NGNFSSLEKIVDVIPVV-QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 469 (826)
Q Consensus 392 ~~~~~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~-~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~ 469 (826)
..|.+||+.+ +...........+..-. ....... + .....++|+|||+.| ++...+ ..
T Consensus 306 ------------~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---i--~~~~~~~~s~~~~~l-~s~s~d--g~ 365 (447)
T 3dw8_B 306 ------------LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC---I--FDKFECCWNGSDSVV-MTGSYN--NF 365 (447)
T ss_dssp ------------SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG---G--GCCCCEEECTTSSEE-EEECST--TE
T ss_pred ------------CeEEEEeCCCCccccceeeccccccccccccccccc---c--ccceEEEECCCCCEE-EEeccC--CE
Confidence 4589999876 33321111110000000 0000000 0 012247899999977 444333 45
Q ss_pred EEEEECCCCcEEEec
Q 003363 470 IISVNVSSGELLRIT 484 (826)
Q Consensus 470 l~~vdl~tg~~~~lt 484 (826)
|+.+|+.+++...+.
T Consensus 366 v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 366 FRMFDRNTKRDITLE 380 (447)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEEcCCCcceeee
Confidence 666788888876654
No 304
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.28 E-value=9.8e-11 Score=124.72 Aligned_cols=227 Identities=11% Similarity=0.008 Sum_probs=137.4
Q ss_pred eEEEEe-cCCceeEEEecCC---CccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCC
Q 003363 180 IQFELW-SQSQLEKEFHVPQ---TVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 255 (826)
Q Consensus 180 ~~~~i~-~~~~~~~~~~~~~---~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (826)
.+..++ ..++..+.+.... .. ..++|||||++|++....
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~v~~~~--------------------------- 54 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTP----------MVPMVAPGGRIAYATVNK--------------------------- 54 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCC----------CCEEECTTSSEEEEEETT---------------------------
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCc----------cceEEcCCCCEEEEEeCC---------------------------
Confidence 455444 3455555555443 23 689999999988776432
Q ss_pred cceeecCCCccCCCccCceEEEEEccCCceEe-ccCCCC----CCccceEEEeeCCCCCccEEEEEeecCcceeeeeeee
Q 003363 256 QGDWEEDWGETYAGKRQPSLFVININSGEVQA-VKGIPK----SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYC 330 (826)
Q Consensus 256 ~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~-l~~~~~----~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~ 330 (826)
...|++||+.+++... +. ... ...+..++|+|||+. |++........+...
T Consensus 55 ----------------~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~----l~~~~~~~~~~~~~~--- 110 (337)
T 1pby_B 55 ----------------SESLVKIDLVTGETLGRID-LSTPEERVKSLFGAALSPDGKT----LAIYESPVRLELTHF--- 110 (337)
T ss_dssp ----------------TTEEEEEETTTCCEEEEEE-CCBTTEEEECTTCEEECTTSSE----EEEEEEEEEECSSCE---
T ss_pred ----------------CCeEEEEECCCCCeEeeEE-cCCcccccccccceEECCCCCE----EEEEecccccccccc---
Confidence 2579999999888654 32 111 114567899999997 777642100000000
Q ss_pred ccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEe
Q 003363 331 YNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID 410 (826)
Q Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d 410 (826)
......|+++|+ .+++.............+.|||||++|++.+ ..|+++|
T Consensus 111 ~~~~~~i~v~d~-----------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-------------~~i~~~d 160 (337)
T 1pby_B 111 EVQPTRVALYDA-----------------ETLSRRKAFEAPRQITMLAWARDGSKLYGLG-------------RDLHVMD 160 (337)
T ss_dssp EECCCEEEEEET-----------------TTTEEEEEEECCSSCCCEEECTTSSCEEEES-------------SSEEEEE
T ss_pred cccCceEEEEEC-----------------CCCcEEEEEeCCCCcceeEECCCCCEEEEeC-------------CeEEEEE
Confidence 002358999998 5555443333334467789999999987762 2499999
Q ss_pred CCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeE---------------------E
Q 003363 411 WPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ---------------------V 469 (826)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~---------------------~ 469 (826)
+.+++... .+.... ......|+|||+.|++.....+.. .
T Consensus 161 ~~~~~~~~----------~~~~~~----------~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (337)
T 1pby_B 161 PEAGTLVE----------DKPIQS----------WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG 220 (337)
T ss_dssp TTTTEEEE----------EECSTT----------TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE
T ss_pred CCCCcEee----------eeeccc----------cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccc
Confidence 88754321 111000 012447899998776554322222 6
Q ss_pred EEEEECCCCcEEEecCCC--CCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 470 IISVNVSSGELLRITPAE--SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 470 l~~vdl~tg~~~~lt~~~--~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
|+.+|+.+++...+.... .......+++|++.+++. . ..|++.++.+.
T Consensus 221 v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~-----~~v~~~d~~~~ 270 (337)
T 1pby_B 221 LLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-Y-----NVLESFDLEKN 270 (337)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-E-----SEEEEEETTTT
T ss_pred eEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-C-----CeEEEEECCCC
Confidence 899999999876443322 233446889999987766 1 56888886543
No 305
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.28 E-value=9.6e-12 Score=137.43 Aligned_cols=279 Identities=10% Similarity=0.003 Sum_probs=161.5
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 003363 156 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (826)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~ 235 (826)
...++|||||++|+.....+ .+.+|+....... .. ...++ ......|+|||++|+..+.+.... .
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~-----~v~i~d~~~~~~~-~~-~~~~~------~~~~~~~~~~~~~l~~~~~dg~i~--i 123 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDG-----HDFLFNTIIRDGS-KM-LKRAD------YTAVDTAKLQMRRFILGTTEGDIK--V 123 (420)
T ss_dssp CTTCEEEEEETTEEEEEETT-----EEEEEECCSEETT-TT-SCSCC------EEEEEEECSSSCEEEEEETTSCEE--E
T ss_pred ccceeeeecCCeEEEEEcCC-----cEEEEEeccccee-eE-EecCC------ceEEEEEecCCCEEEEEECCCCEE--E
Confidence 44679999999999887643 4556632211110 00 01111 124557999999999988766443 3
Q ss_pred ccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceE-eccCCCCCCccceEEEeeCCCCCccEEE
Q 003363 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ-AVKGIPKSLSVGQVVWAPLNEGLHQYLV 314 (826)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~-~l~~~~~~~~~~~~~wSPDg~~~~~~lv 314 (826)
|+............+........|.++....+++..+..|.+||+.+++.. .+ ......+..++|+|||+. |+
T Consensus 124 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~----l~ 197 (420)
T 3vl1_A 124 LDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL--IGHRATVTDIAIIDRGRN----VL 197 (420)
T ss_dssp ECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE--ECCSSCEEEEEEETTTTE----EE
T ss_pred EeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE--cCCCCcEEEEEEcCCCCE----EE
Confidence 332222222223345555667788888555666667789999999887644 44 234456788999999997 77
Q ss_pred EEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc-eecC------------------------C
Q 003363 315 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLT------------------------E 369 (826)
Q Consensus 315 f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt------------------------~ 369 (826)
..+ .+..|.++|+ .+++. ..+. .
T Consensus 198 s~~---------------~d~~v~iwd~-----------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 245 (420)
T 3vl1_A 198 SAS---------------LDGTIRLWEC-----------------GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEI 245 (420)
T ss_dssp EEE---------------TTSCEEEEET-----------------TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGG
T ss_pred EEc---------------CCCcEEEeEC-----------------CCCceeEEeecCCCCCCCccEEEEecCCcceeeec
Confidence 665 2235667776 22221 1111 1
Q ss_pred CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCC
Q 003363 370 SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSN 449 (826)
Q Consensus 370 ~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~ 449 (826)
....+....|||||+.|+..+.+ ..|.+||+.++...... . .. +...+..+
T Consensus 246 ~~~~v~~~~~s~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~~---------~-~~--------~~~~v~~~ 296 (420)
T 3vl1_A 246 STSKKNNLEFGTYGKYVIAGHVS-----------GVITVHNVFSKEQTIQL---------P-SK--------FTCSCNSL 296 (420)
T ss_dssp CCCCCCTTCSSCTTEEEEEEETT-----------SCEEEEETTTCCEEEEE---------C-CT--------TSSCEEEE
T ss_pred ccCcccceEEcCCCCEEEEEcCC-----------CeEEEEECCCCceeEEc---------c-cc--------cCCCceeE
Confidence 23456778999999998776644 35899998775532110 0 00 11234577
Q ss_pred ccccCCCEEEEEEEeCCeEEEEEEECCCCc--EEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 450 PWLSDGCTMLLSSIWGSSQVIISVNVSSGE--LLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 450 ~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~--~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
.|+|||+.++++...++ .|..+|+.+++ +..+...........+.++++ ++++.+.. ..+.+.++..
T Consensus 297 ~~~~~~~~~l~~g~~dg--~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d---~~v~iw~~~~ 365 (420)
T 3vl1_A 297 TVDGNNANYIYAGYENG--MLAQWDLRSPECPVGEFLINEGTPINNVYFAAGA-LFVSSGFD---TSIKLDIISD 365 (420)
T ss_dssp EECSSCTTEEEEEETTS--EEEEEETTCTTSCSEEEEESTTSCEEEEEEETTE-EEEEETTT---EEEEEEEECC
T ss_pred EEeCCCCCEEEEEeCCC--eEEEEEcCCCcCchhhhhccCCCCceEEEeCCCC-EEEEecCC---ccEEEEeccC
Confidence 89999984445554444 45666887764 455544333223334556654 44443322 2355555543
No 306
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=99.27 E-value=4.5e-12 Score=128.83 Aligned_cols=209 Identities=16% Similarity=0.164 Sum_probs=112.3
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (826)
+..|.||++||.+.. ...|..++..|+ .+|.|+++|+||. |.+.. ....|+.+.++.+.+.-.+.
T Consensus 11 ~~~~~lv~lhg~g~~--~~~~~~~~~~L~-~~~~vi~~Dl~Gh---G~S~~---------~~~~~~~~~~~~~~~~l~~~ 75 (242)
T 2k2q_B 11 SEKTQLICFPFAGGY--SASFRPLHAFLQ-GECEMLAAEPPGH---GTNQT---------SAIEDLEELTDLYKQELNLR 75 (242)
T ss_dssp TCCCEEESSCCCCHH--HHHHHHHHHHHC-CSCCCEEEECCSS---CCSCC---------CTTTHHHHHHHHTTTTCCCC
T ss_pred CCCceEEEECCCCCC--HHHHHHHHHhCC-CCeEEEEEeCCCC---CCCCC---------CCcCCHHHHHHHHHHHHHhh
Confidence 445678999996644 446777777775 4799999999994 43311 02356666666655442222
Q ss_pred -CCcEEEEEecchHHHHHHHHHh------CCCceeEEEecCCccchhhhccCCCCCCchhhhhccC-cCC-c------cC
Q 003363 670 -PSKVTVVGGSHGGFLTTHLIGQ------APDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGS-KGK-D------SF 734 (826)
Q Consensus 670 -~~rv~l~G~S~GG~~a~~~a~~------~p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~------~~ 734 (826)
.+++.|+||||||.+++.+|.+ +|+.+-......|....... .......+...+.. ... . ..
T Consensus 76 ~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (242)
T 2k2q_B 76 PDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAVIISAIQPPHIQRKKV---SHLPDDQFLDHIIQLGGMPAELVENKEV 152 (242)
T ss_dssp CCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSEEEEEEECSCCCSCCC---SSCTTHHHHHTTCCTTCCCCTTTHHHHT
T ss_pred cCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEEEEECCCCCCCCcccc---cCCCHHHHHHHHHHhCCCChHHhcCHHH
Confidence 2689999999999999999876 57654211111121110000 00000000000000 000 0 00
Q ss_pred C--CCCCh-hhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCCCCCCCCHH
Q 003363 735 T--ESPSV-EDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHGIERPQSDF 811 (826)
Q Consensus 735 ~--~~~~~-~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~~~~~~~~~ 811 (826)
. ..+.. ........... ..+.++++|+|+++|++|..++ .... .+.+.-...+++++++ ||.....+. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~-~~l~~i~~P~lvi~G~~D~~~~-~~~~----~~~~~~~~~~~~~~~~-gH~~~~e~p-~ 224 (242)
T 2k2q_B 153 MSFFLPSFRSDYRALEQFEL-YDLAQIQSPVHVFNGLDDKKCI-RDAE----GWKKWAKDITFHQFDG-GHMFLLSQT-E 224 (242)
T ss_dssp TTTCCSCHHHHHHHHTCCCC-SCCTTCCCSEEEEEECSSCCHH-HHHH----HHHTTCCCSEEEEEEC-CCSHHHHHC-H
T ss_pred HHHHHHHHHHHHHHHHhccc-CCCCccCCCEEEEeeCCCCcCH-HHHH----HHHHHhcCCeEEEEeC-CceeEcCCH-H
Confidence 0 00111 11111111111 1256789999999999998753 2222 2333222345777875 897654433 4
Q ss_pred HHHHHHHHHHHHH
Q 003363 812 ESFLNIGLWFKKY 824 (826)
Q Consensus 812 ~~~~~i~~w~~~~ 824 (826)
++...+.+|+++.
T Consensus 225 ~~~~~i~~fl~~~ 237 (242)
T 2k2q_B 225 EVAERIFAILNQH 237 (242)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhcc
Confidence 7788899998753
No 307
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=99.26 E-value=3e-11 Score=124.66 Aligned_cols=212 Identities=13% Similarity=0.057 Sum_probs=115.4
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCC
Q 003363 589 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLA 668 (826)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~ 668 (826)
.+..|.||++||++.. ...|..... | ..+|.|+++|++|. +.... ....++++.+.+..+++.- .
T Consensus 18 ~~~~~~lv~lhg~~~~--~~~~~~~~~-l-~~~~~v~~~d~~G~---~~~~~-------~~~~~~~~~~~~~~~i~~~-~ 82 (265)
T 3ils_A 18 MVARKTLFMLPDGGGS--AFSYASLPR-L-KSDTAVVGLNCPYA---RDPEN-------MNCTHGAMIESFCNEIRRR-Q 82 (265)
T ss_dssp TTSSEEEEEECCTTCC--GGGGTTSCC-C-SSSEEEEEEECTTT---TCGGG-------CCCCHHHHHHHHHHHHHHH-C
T ss_pred CCCCCEEEEECCCCCC--HHHHHHHHh-c-CCCCEEEEEECCCC---CCCCC-------CCCCHHHHHHHHHHHHHHh-C
Confidence 3456889999997765 445666556 5 67899999999994 22210 1123444444333333321 1
Q ss_pred CCCcEEEEEecchHHHHHHHHH---hCCCceeEEEecCCccchhhhccCCCCCC--chhhhhccCcCC----c--cCCCC
Q 003363 669 NPSKVTVVGGSHGGFLTTHLIG---QAPDKFVAAAARNPLCNLALMVGTTDIPD--WCYVESYGSKGK----D--SFTES 737 (826)
Q Consensus 669 d~~rv~l~G~S~GG~~a~~~a~---~~p~~~~a~v~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~----~--~~~~~ 737 (826)
...++.|+|||+||.++..++. .++++++++|+.++...... ...+. ..+......... . .-...
T Consensus 83 ~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (265)
T 3ils_A 83 PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAM----EQLPRAFYEHCNSIGLFATQPGASPDGSTEP 158 (265)
T ss_dssp SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCSSCCC----CCCCHHHHHHHHHTTTTTTSSSSCSSSCSCC
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCCCCCcc----cccCHHHHHHHHHHHHhCCCccccccCCHHH
Confidence 2358999999999999999987 67888999988876432100 00000 000000000000 0 00000
Q ss_pred CCh---hhHHHHhhcCc--ccccCCCCCcEE-EEEeCC---CCCCC--------------cHHHHHHHHHHHhCCCCEEE
Q 003363 738 PSV---EDLTRFHSKSP--ISHISKVKTPTI-FLLGAQ---DLRVP--------------VSNGLQYARALREKGVETKV 794 (826)
Q Consensus 738 ~~~---~~~~~~~~~sp--~~~~~~i~~PvL-ii~G~~---D~~vp--------------~~~~~~~~~~l~~~g~~~~~ 794 (826)
... .....+..... .....++++|++ +++|++ |..++ ......+.+.+. +.++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~lii~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~--~~~~~~ 236 (265)
T 3ils_A 159 PSYLIPHFTAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMP--GASFDI 236 (265)
T ss_dssp CTTHHHHHHHHHHHTTTCCCCCCCCSSCCEEEEEEEEECSSCTTTSCCCSSCCTTTSCCCCCSCTTHHHHST--TCCEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCccCCCCeEEEEEccCCCCccccCccccCcchhhccccccCcchHHHhCC--ccceeE
Confidence 000 00111111111 112346889977 999999 99873 333333333222 136899
Q ss_pred EEeCCCCCCCCC-CCCHHHHHHHHHHHH
Q 003363 795 IVFPNDVHGIER-PQSDFESFLNIGLWF 821 (826)
Q Consensus 795 ~~~p~~~H~~~~-~~~~~~~~~~i~~w~ 821 (826)
++++|+||.+.. .+...++.+.|.+||
T Consensus 237 ~~i~gagH~~~~~~e~~~~v~~~i~~fL 264 (265)
T 3ils_A 237 VRADGANHFTLMQKEHVSIISDLIDRVM 264 (265)
T ss_dssp EEEEEEETTGGGSTTTTHHHHHHHHHHT
T ss_pred EEcCCCCcceeeChhhHHHHHHHHHHHh
Confidence 999999998762 233335555555554
No 308
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=99.26 E-value=2.1e-11 Score=128.74 Aligned_cols=214 Identities=14% Similarity=0.090 Sum_probs=124.7
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCcc-ch-HHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHH
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVN 653 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~-~~-~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~ 653 (826)
+.+.++.|.++. .+..+.||++||.... ... |. .....|+++||.|+.+|+||. |... .....+
T Consensus 16 l~~~i~~p~~~~-~~~~~~VvllHG~~~~--~~~~~~~~l~~~L~~~G~~v~~~d~~g~---g~~~--------~~~~~~ 81 (317)
T 1tca_A 16 LDAGLTCQGASP-SSVSKPILLVPGTGTT--GPQSFDSNWIPLSTQLGYTPCWISPPPF---MLND--------TQVNTE 81 (317)
T ss_dssp HHHTEEETTBCT-TSCSSEEEEECCTTCC--HHHHHTTTHHHHHHTTTCEEEEECCTTT---TCSC--------HHHHHH
T ss_pred HhheeeCCCCCC-CCCCCeEEEECCCCCC--cchhhHHHHHHHHHhCCCEEEEECCCCC---CCCc--------HHHHHH
Confidence 334466676543 2344669999997654 233 65 677889999999999999984 3211 012357
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCC---CceeEEEecCCccchhhhccCCCCCCchhhhhccCcC
Q 003363 654 DVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKG 730 (826)
Q Consensus 654 D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (826)
++.+.++++.+.. ..++|.|+|||+||.++.+++..+| ++++++|+++|.......... ...+....
T Consensus 82 ~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~g~~~~~~--------~~~~~~~~ 151 (317)
T 1tca_A 82 YMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKGTVLAGP--------LDALAVSA 151 (317)
T ss_dssp HHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTCBGGGHH--------HHHTTCBC
T ss_pred HHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCCCCcchhh--------hhhhhhcC
Confidence 7888888887763 3478999999999999999888775 789999999886532211100 00000000
Q ss_pred CccCCCCCChhhHHHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHH--HHHHHHHHHhCCCCEEEEEe-------CCCC
Q 003363 731 KDSFTESPSVEDLTRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN--GLQYARALREKGVETKVIVF-------PNDV 801 (826)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~--~~~~~~~l~~~g~~~~~~~~-------p~~~ 801 (826)
...............+.... .....+|+++++|+.|..|++.. +......+.. .+.+.+ ++.+
T Consensus 152 ~~~~~~~~~s~f~~~L~~~~----~~~~~vp~~~i~g~~D~iV~p~~~~g~~~~~~l~~----a~~~~~~~~~~~~~~~g 223 (317)
T 1tca_A 152 PSVWQQTTGSALTTALRNAG----GLTQIVPTTNLYSATDEIVQPQVSNSPLDSSYLFN----GKNVQAQAVCGPLFVID 223 (317)
T ss_dssp HHHHHTBTTCHHHHHHHHTT----TTBCSSCEEEEECTTCSSSCCCCSSSTTSTTCCBT----SEEEEHHHHHCTTCCCC
T ss_pred chHHhhCcCcHHHHHHHhcC----CCCCCCCEEEEEeCCCCeECCccccccchhhhccC----CccEEeeeccCCCCccC
Confidence 00000000001111111110 01246899999999999998766 2211122221 122222 5788
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH
Q 003363 802 HGIERPQSDFESFLNIGLWFKK 823 (826)
Q Consensus 802 H~~~~~~~~~~~~~~i~~w~~~ 823 (826)
|..... +. +.+..+++||+.
T Consensus 224 H~~~l~-~p-~~~~~v~~~L~~ 243 (317)
T 1tca_A 224 HAGSLT-SQ-FSYVVGRSALRS 243 (317)
T ss_dssp TTHHHH-BH-HHHHHHHHHHHC
T ss_pred cccccC-CH-HHHHHHHHHhcC
Confidence 964322 22 456788888864
No 309
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.26 E-value=6.3e-10 Score=120.29 Aligned_cols=235 Identities=9% Similarity=0.084 Sum_probs=139.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|||||+.|++....+ .+.+| ..++...+..+. ...+.| ..+.|+|||+.|+..+.+
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~-~h~~~v------~~~~~~~~~~~l~~~~~d--- 73 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNH-----EVHIYEKSGNKWVQVHELK-EHNGQV------TGVDWAPDSNRIVTCGTD--- 73 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSS-----EEEEEEEETTEEEEEEEEE-CCSSCE------EEEEEETTTTEEEEEETT---
T ss_pred CCeEEEEECCCCCEEEEEeCCC-----EEEEEeCCCCcEEeeeeec-CCCCcc------cEEEEeCCCCEEEEEcCC---
Confidence 3588899999999998874432 45556 333311222221 222223 799999999999886532
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEecc-CCCCCCccceEEEeeCCCCCc
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGLH 310 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~-~~~~~~~~~~~~wSPDg~~~~ 310 (826)
..|.+||+.+++..... -......+..+.|+|||+.
T Consensus 74 -----------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-- 110 (372)
T 1k8k_C 74 -----------------------------------------RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK-- 110 (372)
T ss_dssp -----------------------------------------SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSE--
T ss_pred -----------------------------------------CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCE--
Confidence 46899999888743321 1233456788999999997
Q ss_pred cEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc----ceec-CCCCccccCceecCCCCE
Q 003363 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP----VVNL-TESISSAFFPRFSPDGKF 385 (826)
Q Consensus 311 ~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~L-t~~~~~~~~p~~SpDG~~ 385 (826)
|+..+ .+..|+++|+ ..+. ...+ ..+...+....|+|||++
T Consensus 111 --l~~~~---------------~d~~v~i~d~-----------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 111 --FAVGS---------------GSRVISICYF-----------------EQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp --EEEEE---------------TTSSEEEEEE-----------------ETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred --EEEEe---------------CCCEEEEEEe-----------------cCCCcceeeeeeecccCCCeeEEEEcCCCCE
Confidence 77665 2235777776 2222 2233 334566888999999998
Q ss_pred EEEEeccCCCCCCCCcccceEEEEeCCCCCCCCccc--------ceeeeeeeeeccCCCCCcccccCCCCCCccccCCCE
Q 003363 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLE--------KIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 457 (826)
Q Consensus 386 l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~--------~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~ 457 (826)
|+..+.+ ..|++||+.......... ........+. + ....+..+.|+|||+.
T Consensus 157 l~~~~~d-----------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~v~~~~~~~~~~~ 216 (372)
T 1k8k_C 157 LAAGSCD-----------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--------S-SCGWVHGVCFSANGSR 216 (372)
T ss_dssp EEEEETT-----------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--------C-CSSCEEEEEECSSSSE
T ss_pred EEEEcCC-----------CCEEEEEcccccccccccccccccccchhhheEecC--------C-CCCeEEEEEECCCCCE
Confidence 8876644 358888865322110000 0000111110 0 1123457789999986
Q ss_pred EEEEEEeCCeEEEEEEECCCCcEEEe-cCCCCCeeeEEEeecCCEEE
Q 003363 458 MLLSSIWGSSQVIISVNVSSGELLRI-TPAESNFSWSLLTLDGDNII 503 (826)
Q Consensus 458 l~~~~~~~~~~~l~~vdl~tg~~~~l-t~~~~~~~~~~~s~dg~~l~ 503 (826)
|+.. ..++ .|..+|+.+++.... ......+....|++++..++
T Consensus 217 l~~~-~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 260 (372)
T 1k8k_C 217 VAWV-SHDS--TVCLADADKKMAVATLASETLPLLAVTFITESSLVA 260 (372)
T ss_dssp EEEE-ETTT--EEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEE
T ss_pred EEEE-eCCC--EEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEE
Confidence 6544 3344 466667777765543 33333556678888876443
No 310
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.26 E-value=3.6e-11 Score=130.70 Aligned_cols=211 Identities=13% Similarity=0.096 Sum_probs=118.3
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCC-CCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKEN-ENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (826)
++|||+.++... ....+.++++.+.. .....+.... ..+...+|||||++|+..+..+ .+
T Consensus 19 ~s~~g~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~s~~~~~l~s~s~d~-----~v 79 (377)
T 3dwl_C 19 FNSQRTEFVTTT---------ATNQVELYEQDGNGWKHARTFSDHD-----KIVTCVDWAPKSNRIVTCSQDR-----NA 79 (377)
T ss_dssp ECSSSSEEECCC---------SSSCBCEEEEETTEEEECCCBCCCS-----SCEEEEEECTTTCCEEEEETTS-----SE
T ss_pred ECCCCCEEEEec---------CCCEEEEEEccCCceEEEEEEecCC-----ceEEEEEEeCCCCEEEEEeCCC-----eE
Confidence 378998776532 23345556654321 1222333222 4688999999999999876543 35
Q ss_pred EEec--CCc-eeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCccee
Q 003363 183 ELWS--QSQ-LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (826)
Q Consensus 183 ~i~~--~~~-~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (826)
.+|+ .+. ......+ ....+.| ..+.|+|||+.|+..+.+
T Consensus 80 ~vwd~~~~~~~~~~~~~-~~~~~~v------~~~~~~~~~~~l~~~~~d------------------------------- 121 (377)
T 3dwl_C 80 YVYEKRPDGTWKQTLVL-LRLNRAA------TFVRWSPNEDKFAVGSGA------------------------------- 121 (377)
T ss_dssp EEC------CCCCEEEC-CCCSSCE------EEEECCTTSSCCEEEESS-------------------------------
T ss_pred EEEEcCCCCceeeeeEe-cccCCce------EEEEECCCCCEEEEEecC-------------------------------
Confidence 5662 222 1122222 1222223 799999999999887543
Q ss_pred ecCCCccCCCccCceEEEEEccCCc----eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCC
Q 003363 260 EEDWGETYAGKRQPSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 335 (826)
Q Consensus 260 ~~d~g~~~~~~~~~~l~v~d~~~g~----~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~ 335 (826)
..|.+||+.+++ .+.+. .+....+..++|+|||+. |+..+ .+.
T Consensus 122 -------------~~i~iwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~----l~~~~---------------~d~ 168 (377)
T 3dwl_C 122 -------------RVISVCYFEQENDWWVSKHLK-RPLRSTILSLDWHPNNVL----LAAGC---------------ADR 168 (377)
T ss_dssp -------------SCEEECCC-----CCCCEEEC-SSCCSCEEEEEECTTSSE----EEEEE---------------SSS
T ss_pred -------------CeEEEEEECCcccceeeeEee-cccCCCeEEEEEcCCCCE----EEEEe---------------CCC
Confidence 458888888776 45552 124557789999999997 77766 223
Q ss_pred ceEEEEcccccchh-hhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCC
Q 003363 336 ALYAVRVSLYKSEA-SELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 413 (826)
Q Consensus 336 ~l~~~d~~~~~~~~-~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~ 413 (826)
.|+++|+....... ............++ ...+ .+...+....|||||++|+..+.+ ..|.+||+.+
T Consensus 169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d-----------~~i~iwd~~~ 236 (377)
T 3dwl_C 169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHD-----------SSVTIAYPSA 236 (377)
T ss_dssp CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETT-----------TEEC-CEECS
T ss_pred EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCC-----------CcEEEEECCC
Confidence 57777762110000 00000000000122 2233 556668889999999999877754 3588899887
Q ss_pred CCC
Q 003363 414 NGN 416 (826)
Q Consensus 414 ~~~ 416 (826)
+..
T Consensus 237 ~~~ 239 (377)
T 3dwl_C 237 PEQ 239 (377)
T ss_dssp TTS
T ss_pred CCC
Confidence 654
No 311
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.26 E-value=5.3e-10 Score=122.85 Aligned_cols=263 Identities=13% Similarity=0.111 Sum_probs=157.9
Q ss_pred cceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCcc
Q 003363 124 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVH 201 (826)
Q Consensus 124 ~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~ 201 (826)
.....+.++++.+. +...+.... ....+...+|||||++|+.....+ .+.+|+ .++..+... ...
T Consensus 110 ~~d~~v~lw~~~~~--~~~~~~~~~---~~~~v~~v~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~---~~~ 176 (401)
T 4aez_A 110 ALERNVYVWNADSG--SVSALAETD---ESTYVASVKWSHDGSFLSVGLGNG-----LVDIYDVESQTKLRTMA---GHQ 176 (401)
T ss_dssp EETTEEEEEETTTC--CEEEEEECC---TTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEEC---CCS
T ss_pred ECCCeEEEeeCCCC--cEeEeeecC---CCCCEEEEEECCCCCEEEEECCCC-----eEEEEECcCCeEEEEec---CCC
Confidence 34456777776332 322222221 114588999999999999876543 456663 333333322 222
Q ss_pred ccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEcc
Q 003363 202 GSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ 281 (826)
Q Consensus 202 g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~ 281 (826)
+.| ..++| +++.|+..+. ...|.+||+.
T Consensus 177 ~~v------~~~~~--~~~~l~~~~~--------------------------------------------dg~i~i~d~~ 204 (401)
T 4aez_A 177 ARV------GCLSW--NRHVLSSGSR--------------------------------------------SGAIHHHDVR 204 (401)
T ss_dssp SCE------EEEEE--ETTEEEEEET--------------------------------------------TSEEEEEETT
T ss_pred Cce------EEEEE--CCCEEEEEcC--------------------------------------------CCCEEEEecc
Confidence 222 67888 5566666533 3578999987
Q ss_pred C-Cc-eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCC
Q 003363 282 S-GE-VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 359 (826)
Q Consensus 282 ~-g~-~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 359 (826)
. +. +..+ ......+..++|+|||+. |+..+ .+..|+++|+
T Consensus 205 ~~~~~~~~~--~~~~~~v~~~~~~~~~~~----l~s~~---------------~d~~v~iwd~----------------- 246 (401)
T 4aez_A 205 IANHQIGTL--QGHSSEVCGLAWRSDGLQ----LASGG---------------NDNVVQIWDA----------------- 246 (401)
T ss_dssp SSSCEEEEE--ECCSSCEEEEEECTTSSE----EEEEE---------------TTSCEEEEET-----------------
T ss_pred cCcceeeEE--cCCCCCeeEEEEcCCCCE----EEEEe---------------CCCeEEEccC-----------------
Confidence 4 33 3334 334456788999999997 77665 3347889998
Q ss_pred CCCc-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCC
Q 003363 360 EDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCF 438 (826)
Q Consensus 360 ~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f 438 (826)
.++. ...+..+...+....|+|+|+.++...... ....|++||+.++...... ..
T Consensus 247 ~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs--------~d~~i~i~d~~~~~~~~~~----------~~------ 302 (401)
T 4aez_A 247 RSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT--------MDKQIHFWNAATGARVNTV----------DA------ 302 (401)
T ss_dssp TCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT--------TTCEEEEEETTTCCEEEEE----------EC------
T ss_pred CCCCccEEecCCcceEEEEEECCCCCCEEEEecCC--------CCCEEEEEECCCCCEEEEE----------eC------
Confidence 4443 445666777788999999998887765311 1256999998876542111 00
Q ss_pred cccccCCCCCCccccCCCEEEEEEE-eCCeEEEEEEECCCCcEEEe---cCCCCCeeeEEEeecCCEEEEEEeCCCCCCe
Q 003363 439 PGLYSSSILSNPWLSDGCTMLLSSI-WGSSQVIISVNVSSGELLRI---TPAESNFSWSLLTLDGDNIIAVSSSPVDVPQ 514 (826)
Q Consensus 439 ~g~~~~~~~~~~ws~Dg~~l~~~~~-~~~~~~l~~vdl~tg~~~~l---t~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~ 514 (826)
...+..+.|+|||+.|+.++. .++. |..+|+.+++...+ ......+....|++++..++....+ ..
T Consensus 303 ----~~~v~~~~~s~~~~~l~~~~g~~dg~--i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d----g~ 372 (401)
T 4aez_A 303 ----GSQVTSLIWSPHSKEIMSTHGFPDNN--LSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD----EN 372 (401)
T ss_dssp ----SSCEEEEEECSSSSEEEEEECTTTCE--EEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTT----SE
T ss_pred ----CCcEEEEEECCCCCeEEEEeecCCCc--EEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCC----Cc
Confidence 012446789999997765532 3344 44555556655543 3333445566889998866554332 24
Q ss_pred EEEEeeccc
Q 003363 515 VKYGYFVDK 523 (826)
Q Consensus 515 l~~~~~~~~ 523 (826)
|.+.++.++
T Consensus 373 i~iw~~~~~ 381 (401)
T 4aez_A 373 LKFWRVYDG 381 (401)
T ss_dssp EEEEECCC-
T ss_pred EEEEECCCC
Confidence 666665443
No 312
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.25 E-value=5.3e-10 Score=119.96 Aligned_cols=273 Identities=11% Similarity=0.025 Sum_probs=158.5
Q ss_pred ccEEEEe-----CC-CCCeEEEEecCCCCCCeEEEEec--CCc----eeEEEecCCCccccccCCCcccceeecCCCCeE
Q 003363 155 GASAVVP-----SP-SGSKLLVVRNPENESPIQFELWS--QSQ----LEKEFHVPQTVHGSVYADGWFEGISWNSDETLI 222 (826)
Q Consensus 155 ~~~~~~~-----SP-dG~~la~~~~~~~~~~~~~~i~~--~~~----~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~i 222 (826)
.+...+| +| ||+.|+..+.++ .+.+|+ .++ .......-.+..+.| ..++|+||++.|
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~-----~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V------~~~~~~~~~~~l 91 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDK-----TVMIWKLYEEEQNGYFGIPHKALTGHNHFV------SDLALSQENCFA 91 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTS-----CEEEEEECSSCCSSBSEEEEEEECCCSSCE------EEEEECSSTTEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCC-----EEEEEECCcCCcccccccccchhccCCCce------EEEEECCCCCEE
Confidence 4777788 77 999998766543 355552 111 111111112232333 789999999999
Q ss_pred EEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCC-CCCCccceEE
Q 003363 223 AYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGI-PKSLSVGQVV 301 (826)
Q Consensus 223 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~-~~~~~~~~~~ 301 (826)
+..+.+...+ .|+............+........|.++....+++.....|.+||+.+......... .....+..+.
T Consensus 92 ~s~s~D~~v~--lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 92 ISSSWDKTLR--LWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVR 169 (343)
T ss_dssp EEEETTSEEE--EEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEE
T ss_pred EEEcCCCcEE--EEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeee
Confidence 9888776544 333222222223334555666778898865566666788999999986544443111 2233567889
Q ss_pred EeeCCCCCc------cEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCcccc
Q 003363 302 WAPLNEGLH------QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAF 375 (826)
Q Consensus 302 wSPDg~~~~------~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~ 375 (826)
|+|+++... ++|+..+ .+..|.++|. .......+..+...+.
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~---------------~d~~i~iwd~-----------------~~~~~~~~~~h~~~v~ 217 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVG---------------WDGRLKVWNT-----------------NFQIRYTFKAHESNVN 217 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEE---------------TTSEEEEEET-----------------TTEEEEEEECCSSCEE
T ss_pred eccccccccccCCCCCEEEEEc---------------CCCEEEEEcC-----------------CCceeEEEcCccccce
Confidence 999984200 0144333 2346778885 4444455666677788
Q ss_pred CceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCC
Q 003363 376 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 455 (826)
Q Consensus 376 ~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg 455 (826)
...|||||++|+..+.+ ..|.+||+............ ...+..++|+||+
T Consensus 218 ~~~~s~~g~~l~sgs~d-----------g~v~iwd~~~~~~~~~~~~~-------------------~~~v~~v~~sp~~ 267 (343)
T 2xzm_R 218 HLSISPNGKYIATGGKD-----------KKLLIWDILNLTYPQREFDA-------------------GSTINQIAFNPKL 267 (343)
T ss_dssp EEEECTTSSEEEEEETT-----------CEEEEEESSCCSSCSEEEEC-------------------SSCEEEEEECSSS
T ss_pred EEEECCCCCEEEEEcCC-----------CeEEEEECCCCcccceeecC-------------------CCcEEEEEECCCC
Confidence 89999999998876654 45889998443221110000 0123467899999
Q ss_pred CEEEEEEEeCCeEEEEEEECCCCcEE---EecC-----------CCCCeeeEEEeecCCEEEEEE
Q 003363 456 CTMLLSSIWGSSQVIISVNVSSGELL---RITP-----------AESNFSWSLLTLDGDNIIAVS 506 (826)
Q Consensus 456 ~~l~~~~~~~~~~~l~~vdl~tg~~~---~lt~-----------~~~~~~~~~~s~dg~~l~~~~ 506 (826)
+.+. .+ .++. +..+|+.+++.. .+.. ....+....|+++|+.|+...
T Consensus 268 ~~la-~~-~d~~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~ 328 (343)
T 2xzm_R 268 QWVA-VG-TDQG--VKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF 328 (343)
T ss_dssp CEEE-EE-ESSC--EEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE
T ss_pred CEEE-EE-CCCC--EEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec
Confidence 8553 32 3333 555576665432 2221 112344567888888665543
No 313
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.25 E-value=7.2e-10 Score=126.53 Aligned_cols=303 Identities=8% Similarity=-0.025 Sum_probs=167.3
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCcceecccEEEEeCC----CCCeEEEEecCCCCC
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSP----SGSKLLVVRNPENES 178 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~-~~lt~~~~~~~~~~~~~~~~SP----dG~~la~~~~~~~~~ 178 (826)
.||||++++.. +. ...+.++++.....+. ..+.. + ......++|| ||++|+......
T Consensus 186 ~spdg~~l~v~-~~--------d~~V~v~D~~~~t~~~~~~i~~-g-----~~p~~va~sp~~~~dg~~l~v~~~~~--- 247 (543)
T 1nir_A 186 MSASGRYLLVI-GR--------DARIDMIDLWAKEPTKVAEIKI-G-----IEARSVESSKFKGYEDRYTIAGAYWP--- 247 (543)
T ss_dssp ECTTSCEEEEE-ET--------TSEEEEEETTSSSCEEEEEEEC-C-----SEEEEEEECCSTTCTTTEEEEEEEES---
T ss_pred ECCCCCEEEEE-CC--------CCeEEEEECcCCCCcEEEEEec-C-----CCcceEEeCCCcCCCCCEEEEEEccC---
Confidence 58999887543 22 1356666652122221 22221 1 3467889999 999987765322
Q ss_pred CeEEEEe-cCCceeEEEecCCC-ccccccCC-CcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCC
Q 003363 179 PIQFELW-SQSQLEKEFHVPQT-VHGSVYAD-GWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 255 (826)
Q Consensus 179 ~~~~~i~-~~~~~~~~~~~~~~-~~g~v~~~-~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (826)
.++.+++ ..++..+.+..... ..+..|.. .....+.+|||++.+++...
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~---------------------------- 299 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK---------------------------- 299 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET----------------------------
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC----------------------------
Confidence 2343333 34455554443210 00000111 13367899999987766532
Q ss_pred cceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCC
Q 003363 256 QGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 335 (826)
Q Consensus 256 ~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~ 335 (826)
....|+++|..+++...++.++....+.++.|+|||++ ++..+. ...
T Consensus 300 ---------------~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~----l~va~~--------------~~~ 346 (543)
T 1nir_A 300 ---------------ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRY----FMTAAN--------------NSN 346 (543)
T ss_dssp ---------------TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCE----EEEEEG--------------GGT
T ss_pred ---------------CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCE----EEEEec--------------CCC
Confidence 23689999988765322111222334667899999997 654442 223
Q ss_pred ceEEEEcccccchhhhhhhhcCCCCCCccee-cCCCC--ccccCce-ecCCCCEEEEEeccCCCCCCCCcccceEEEEeC
Q 003363 336 ALYAVRVSLYKSEASELELKESSSEDLPVVN-LTESI--SSAFFPR-FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 411 (826)
Q Consensus 336 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-Lt~~~--~~~~~p~-~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~ 411 (826)
.|.++|+ .++++.. +..+. ....... ++||+..++..... +...|.+||.
T Consensus 347 ~v~v~D~-----------------~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~---------~d~~V~v~d~ 400 (543)
T 1nir_A 347 KVAVIDS-----------------KDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHL---------GDGSISLIGT 400 (543)
T ss_dssp EEEEEET-----------------TTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBS---------SSSEEEEEEC
T ss_pred eEEEEEC-----------------CCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccC---------CCceEEEEEe
Confidence 6888998 5665443 32111 1112233 47887765444332 1256888998
Q ss_pred CCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeC----CeEEEEEEECCCCcEE--Ee--
Q 003363 412 PTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG----SSQVIISVNVSSGELL--RI-- 483 (826)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~----~~~~l~~vdl~tg~~~--~l-- 483 (826)
++.+.... ...++..+..+. .....+.++|||++|++.+..+ ....|.++|+++++.. .|
T Consensus 401 ~~~~~~~~---~~~~v~~l~~~g---------~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v 468 (543)
T 1nir_A 401 DPKNHPQY---AWKKVAELQGQG---------GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPI 468 (543)
T ss_dssp CTTTCTTT---BTSEEEEEECSC---------SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECH
T ss_pred CCCCCchh---cCeEEEEEEcCC---------CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeec
Confidence 77332110 011233232221 1234567999999888754211 1447888899887754 32
Q ss_pred ------cCCCCCeeeEEEeecCCEEEEEEeC-CCCCCeEEEEeeccc
Q 003363 484 ------TPAESNFSWSLLTLDGDNIIAVSSS-PVDVPQVKYGYFVDK 523 (826)
Q Consensus 484 ------t~~~~~~~~~~~s~dg~~l~~~~s~-~~~p~~l~~~~~~~~ 523 (826)
...........|+++|+++++..-+ ......|.++|..+.
T Consensus 469 ~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 469 AEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp HHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred hhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence 1222334566899999999987643 345677888886544
No 314
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.24 E-value=1.1e-09 Score=127.28 Aligned_cols=278 Identities=12% Similarity=0.120 Sum_probs=163.2
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCC---CCccceeecCCcceecc-cEEEEeCC--CCCeEEEEecCCCC
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKEN---ENSVTFQWAPFPVEMTG-ASAVVPSP--SGSKLLVVRNPENE 177 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~---~~~~~lt~~~~~~~~~~-~~~~~~SP--dG~~la~~~~~~~~ 177 (826)
+||||+.+++.. ...+.++++.+.. .....+.... .. +...+||| ||++||.....+
T Consensus 26 ~spdg~~l~~~~----------~~~v~v~~~~~~~~~~~~~~~~~~h~-----~~~v~~~~~sp~~~~~~l~s~~~dg-- 88 (615)
T 1pgu_A 26 YDPTTNAIAYPC----------GKSAFVRCLDDGDSKVPPVVQFTGHG-----SSVVTTVKFSPIKGSQYLCSGDESG-- 88 (615)
T ss_dssp EETTTTEEEEEE----------TTEEEEEECCSSCCSSCSEEEECTTT-----TSCEEEEEECSSTTCCEEEEEETTS--
T ss_pred ECCCCCEEEEec----------CCeEEEEECCCCCCccccceEEecCC-----CceEEEEEECcCCCCCEEEEecCCC--
Confidence 479999998864 1246666664321 2233333333 45 88999999 999999876543
Q ss_pred CCeEEEEec--CC------ceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCcc
Q 003363 178 SPIQFELWS--QS------QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKD 249 (826)
Q Consensus 178 ~~~~~~i~~--~~------~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (826)
.+.+|+ .+ +...+..+. ...+. +..+.|||||+.|+..+.+..
T Consensus 89 ---~v~vw~~~~~~~~~~~~~~~~~~~~-~~~~~------v~~~~~s~~~~~l~~~~~~~~------------------- 139 (615)
T 1pgu_A 89 ---KVIVWGWTFDKESNSVEVNVKSEFQ-VLAGP------ISDISWDFEGRRLCVVGEGRD------------------- 139 (615)
T ss_dssp ---EEEEEEEEEEGGGTEEEEEEEEEEE-CCSSC------EEEEEECTTSSEEEEEECCSS-------------------
T ss_pred ---EEEEEeCCCCcccccccccccchhh-ccccc------EEEEEEeCCCCEEEEeccCCC-------------------
Confidence 455552 22 112222211 12222 379999999999998865431
Q ss_pred CCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeee
Q 003363 250 CNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKY 329 (826)
Q Consensus 250 ~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~ 329 (826)
....|++|| .+.....+ ......+..+.|+||++. +++++.
T Consensus 140 ---------------------~~~~v~~~d-~~~~~~~~--~~~~~~v~~~~~~~~~~~----~l~~~~----------- 180 (615)
T 1pgu_A 140 ---------------------NFGVFISWD-SGNSLGEV--SGHSQRINACHLKQSRPM----RSMTVG----------- 180 (615)
T ss_dssp ---------------------CSEEEEETT-TCCEEEEC--CSCSSCEEEEEECSSSSC----EEEEEE-----------
T ss_pred ---------------------CccEEEEEE-CCCcceee--ecCCccEEEEEECCCCCc----EEEEEe-----------
Confidence 235788888 33444455 344456788999999996 655552
Q ss_pred eccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCc---cccCceecCC-CCEEEEEeccCCCCCCCCcccc
Q 003363 330 CYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESIS---SAFFPRFSPD-GKFLVFLSAKSSVDSGAHSATD 404 (826)
Q Consensus 330 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~---~~~~p~~SpD-G~~l~f~s~~~~~~~g~~~~~~ 404 (826)
.+..|.++|+ .+++ ...+..+.. .+....|+|| |++|+..+.+ .
T Consensus 181 ---~d~~v~vwd~-----------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----------g 229 (615)
T 1pgu_A 181 ---DDGSVVFYQG-----------------PPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD-----------R 229 (615)
T ss_dssp ---TTTEEEEEET-----------------TTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT-----------C
T ss_pred ---CCCcEEEEeC-----------------CCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC-----------C
Confidence 3347888887 4433 445555655 6888999999 9988876654 3
Q ss_pred eEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec
Q 003363 405 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 484 (826)
Q Consensus 405 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt 484 (826)
.|++||+.+++...... .. .. .....+..+.|+ |++.|+.. ..++ .+..+|+.+++.....
T Consensus 230 ~i~vwd~~~~~~~~~~~---------~~-~~-----~~~~~v~~~~~~-~~~~l~~~-~~d~--~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 230 KISCFDGKSGEFLKYIE---------DD-QE-----PVQGGIFALSWL-DSQKFATV-GADA--TIRVWDVTTSKCVQKW 290 (615)
T ss_dssp CEEEEETTTCCEEEECC---------BT-TB-----CCCSCEEEEEES-SSSEEEEE-ETTS--EEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCCEeEEec---------cc-cc-----ccCCceEEEEEc-CCCEEEEE-cCCC--cEEEEECCCCcEEEEE
Confidence 58999988765422110 00 00 011134467899 88866544 3333 4666688877765443
Q ss_pred CCC-----CCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 003363 485 PAE-----SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 485 ~~~-----~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
... .......+ ++++.++....+ ..+.+.++.
T Consensus 291 ~~~~~~~~~~~~~~~~-~~~~~l~~~~~~----g~i~~~d~~ 327 (615)
T 1pgu_A 291 TLDKQQLGNQQVGVVA-TGNGRIISLSLD----GTLNFYELG 327 (615)
T ss_dssp ECCTTCGGGCEEEEEE-EETTEEEEEETT----SCEEEEETT
T ss_pred cCCCCcccCceeEEEe-CCCCeEEEEECC----CCEEEEECC
Confidence 322 12222233 366666554432 235555543
No 315
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.24 E-value=8.4e-11 Score=123.94 Aligned_cols=235 Identities=9% Similarity=0.004 Sum_probs=145.0
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (826)
++|||+.++-.. ....+.++++.+. .....+.... ..+....|+|||++|+..+..+ .+.
T Consensus 21 fsp~~~~l~s~~---------~dg~v~lWd~~~~-~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~s~d~-----~i~ 80 (304)
T 2ynn_A 21 FHPTEPWVLTTL---------YSGRVELWNYETQ-VEVRSIQVTE-----TPVRAGKFIARKNWIIVGSDDF-----RIR 80 (304)
T ss_dssp ECSSSSEEEEEE---------TTSEEEEEETTTT-EEEEEEECCS-----SCEEEEEEEGGGTEEEEEETTS-----EEE
T ss_pred ECCCCCEEEEEc---------CCCcEEEEECCCC-ceeEEeeccC-----CcEEEEEEeCCCCEEEEECCCC-----EEE
Confidence 388998776432 2345666665322 2223333232 3478899999999999876544 567
Q ss_pred Eec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeec
Q 003363 184 LWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE 261 (826)
Q Consensus 184 i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (826)
+|+ .++....+. +..+.| ..++|+||++.|+..+.+...+.+.+... .........+........|.|
T Consensus 81 vwd~~~~~~~~~~~---~h~~~v------~~~~~~~~~~~l~sgs~D~~v~lWd~~~~-~~~~~~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 81 VFNYNTGEKVVDFE---AHPDYI------RSIAVHPTKPYVLSGSDDLTVKLWNWENN-WALEQTFEGHEHFVMCVAFNP 150 (304)
T ss_dssp EEETTTCCEEEEEE---CCSSCE------EEEEECSSSSEEEEEETTSCEEEEEGGGT-TEEEEEECCCCSCEEEEEECT
T ss_pred EEECCCCcEEEEEe---CCCCcE------EEEEEcCCCCEEEEECCCCeEEEEECCCC-cchhhhhcccCCcEEEEEECC
Confidence 773 333333222 222223 79999999999998888776543322211 011112234455556677887
Q ss_pred CCCc-cCCCccCceEEEEEccCCceE-eccCCCCCCccceEEEee--CCCCCccEEEEEeecCcceeeeeeeeccCCCce
Q 003363 262 DWGE-TYAGKRQPSLFVININSGEVQ-AVKGIPKSLSVGQVVWAP--LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCAL 337 (826)
Q Consensus 262 d~g~-~~~~~~~~~l~v~d~~~g~~~-~l~~~~~~~~~~~~~wSP--Dg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l 337 (826)
+-+. .+++..+..|.+||+.+++.. .+. ......+..+.|+| |++. |+..+ .+..|
T Consensus 151 ~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~----l~s~s---------------~D~~i 210 (304)
T 2ynn_A 151 KDPSTFASGCLDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDKPY----MITAS---------------DDLTI 210 (304)
T ss_dssp TCTTEEEEEETTSEEEEEETTCSSCSEEEE-CCCTTCEEEEEECCSTTCCE----EEEEE---------------TTSEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCccceec-cCCcCcEEEEEEEEcCCCCE----EEEEc---------------CCCeE
Confidence 4333 455666789999999766533 221 22233556778887 5554 55544 33478
Q ss_pred EEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCC
Q 003363 338 YAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (826)
Q Consensus 338 ~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~ 416 (826)
.++|+ .+++ ...+..+...+....|+||++.|+..+.+ ..|.+||..+++.
T Consensus 211 ~iWd~-----------------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~D-----------g~i~iWd~~~~~~ 262 (304)
T 2ynn_A 211 KIWDY-----------------QTKSCVATLEGHMSNVSFAVFHPTLPIIISGSED-----------GTLKIWNSSTYKV 262 (304)
T ss_dssp EEEET-----------------TTTEEEEEEECCSSCEEEEEECSSSSEEEEEETT-----------SCEEEEETTTCCE
T ss_pred EEEeC-----------------CCCccceeeCCCCCCEEEEEECCCCCEEEEEcCC-----------CeEEEEECCCCce
Confidence 89998 4443 45667777778889999999988866654 3589999877553
No 316
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.24 E-value=3.4e-10 Score=134.07 Aligned_cols=226 Identities=12% Similarity=0.089 Sum_probs=139.2
Q ss_pred ccceeEEEEEEeecCCCC----ccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEec
Q 003363 123 NKRKKFMLSTVISKENEN----SVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHV 196 (826)
Q Consensus 123 ~~~~~~l~~~~i~~~~~~----~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~ 196 (826)
.+.++.+.++++...... ...++.+. ..+...+|||||++|+..+..+ .+.+|+ .+...+.+.
T Consensus 401 ~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~-----~~v~~v~~s~~g~~l~sgs~Dg-----~v~vwd~~~~~~~~~~~- 469 (694)
T 3dm0_A 401 ASRDKSIILWKLTKDDKAYGVAQRRLTGHS-----HFVEDVVLSSDGQFALSGSWDG-----ELRLWDLAAGVSTRRFV- 469 (694)
T ss_dssp EETTSEEEEEECCCSTTCSCEEEEEEECCS-----SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEE-
T ss_pred EeCCCcEEEEEccCCCcccccccceecCCC-----CcEEEEEECCCCCEEEEEeCCC-----cEEEEECCCCcceeEEe-
Confidence 344567777777543221 12333333 4588999999999998876543 577783 333333222
Q ss_pred CCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCC-CCCCCCccCCCCCCcceeecCCC--ccCCCccCc
Q 003363 197 PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWG--ETYAGKRQP 273 (826)
Q Consensus 197 ~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~g--~~~~~~~~~ 273 (826)
+..+.| ..++|||||+.|+..+.+...+.+....... ........+..+.....|.++.. ..+++..+.
T Consensus 470 --~h~~~v------~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~ 541 (694)
T 3dm0_A 470 --GHTKDV------LSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK 541 (694)
T ss_dssp --CCSSCE------EEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTS
T ss_pred --CCCCCE------EEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC
Confidence 222333 7899999999999988877554322110000 00111123455556667777642 234555678
Q ss_pred eEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhh
Q 003363 274 SLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELE 353 (826)
Q Consensus 274 ~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~ 353 (826)
.|.+||+.+++..... ......+..++|+|||+. |+..+ .+..|.++|+
T Consensus 542 ~v~vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~----l~sg~---------------~Dg~i~iwd~----------- 590 (694)
T 3dm0_A 542 TVKVWNLSNCKLRSTL-AGHTGYVSTVAVSPDGSL----CASGG---------------KDGVVLLWDL----------- 590 (694)
T ss_dssp CEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSE----EEEEE---------------TTSBCEEEET-----------
T ss_pred eEEEEECCCCcEEEEE-cCCCCCEEEEEEeCCCCE----EEEEe---------------CCCeEEEEEC-----------
Confidence 8999999988765431 334456788999999997 77665 3347888898
Q ss_pred hhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCC
Q 003363 354 LKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (826)
Q Consensus 354 ~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~ 416 (826)
.+++..........+....|||||..|+..+ + ..|.+||+.++..
T Consensus 591 ------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~-----------~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 591 ------AEGKKLYSLEANSVIHALCFSPNRYWLCAAT-E-----------HGIKIWDLESKSI 635 (694)
T ss_dssp ------TTTEEEECCBCSSCEEEEEECSSSSEEEEEE-T-----------TEEEEEETTTTEE
T ss_pred ------CCCceEEEecCCCcEEEEEEcCCCcEEEEEc-C-----------CCEEEEECCCCCC
Confidence 4444333233344577889999998776433 2 2489999887553
No 317
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.23 E-value=8.9e-10 Score=123.07 Aligned_cols=175 Identities=13% Similarity=0.071 Sum_probs=108.7
Q ss_pred ceEEEEEcc--CCceEec-cCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchh
Q 003363 273 PSLFVININ--SGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 349 (826)
Q Consensus 273 ~~l~v~d~~--~g~~~~l-~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 349 (826)
..|.+||+. +++.... ........+..++|+|||+. |+..+ ....++.+++
T Consensus 125 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~----l~~~~---------------~~g~v~~~~~------- 178 (450)
T 2vdu_B 125 KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT----VIIAD---------------KFGDVYSIDI------- 178 (450)
T ss_dssp TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE----EEEEE---------------TTSEEEEEET-------
T ss_pred CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE----EEEEe---------------CCCcEEEEec-------
Confidence 578899988 6654433 11122345778999999997 77665 2347899997
Q ss_pred hhhhhhcCCCCCCcce-----ecCCCCccccCceecCC---CCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCc-c
Q 003363 350 SELELKESSSEDLPVV-----NLTESISSAFFPRFSPD---GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-L 420 (826)
Q Consensus 350 ~~~~~~~~~~~~~~~~-----~Lt~~~~~~~~p~~SpD---G~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~-~ 420 (826)
.++... .+..+...+....|+|| |++|+..+.+ ..|++||+.++..... .
T Consensus 179 ----------~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----------~~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 179 ----------NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----------EHIKISHYPQCFIVDKWL 237 (450)
T ss_dssp ----------TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----------SCEEEEEESCTTCEEEEC
T ss_pred ----------CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----------CcEEEEECCCCceeeeee
Confidence 333222 45556667888999999 8888766643 3588999877553211 1
Q ss_pred cceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC--------------
Q 003363 421 EKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-------------- 486 (826)
Q Consensus 421 ~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~-------------- 486 (826)
.+ +...+..++|+ ||+.|+.. . .+..|..+|+.+++.......
T Consensus 238 ~~-------------------h~~~v~~~~~s-d~~~l~s~-~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (450)
T 2vdu_B 238 FG-------------------HKHFVSSICCG-KDYLLLSA-G--GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLA 294 (450)
T ss_dssp CC-------------------CSSCEEEEEEC-STTEEEEE-E--SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC
T ss_pred cC-------------------CCCceEEEEEC-CCCEEEEE-e--CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccc
Confidence 00 11134467899 99876544 3 334677778888875543321
Q ss_pred ------------CCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 003363 487 ------------ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 520 (826)
Q Consensus 487 ------------~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~ 520 (826)
...+....++++++.+++..... ..|.+.++
T Consensus 295 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d---~~i~iw~~ 337 (450)
T 2vdu_B 295 PPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT---KCIIILEM 337 (450)
T ss_dssp ----------CBCCCEEEEEECSSSSEEEEEETTC---SEEEEEEE
T ss_pred cccccccccccceEEEEEEEEeCCCCEEEEEECCC---CeEEEEEe
Confidence 11344556778888766665332 34666666
No 318
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.23 E-value=5.7e-10 Score=122.55 Aligned_cols=229 Identities=12% Similarity=0.064 Sum_probs=139.2
Q ss_pred cccEEEEeCC-CCCeEEEEecCCCCCCeEEEEec--CC-------ceeEEEecCCCccccccCCCcccceeecCCCCeEE
Q 003363 154 TGASAVVPSP-SGSKLLVVRNPENESPIQFELWS--QS-------QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIA 223 (826)
Q Consensus 154 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~i~~--~~-------~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia 223 (826)
..+...+|+| +|+.|+.....+ .+.+|+ .+ +...... +..+.| ..+.|+|||+.++
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg-----~v~vw~~~~~~~~~~~~~~~~~~~---~h~~~v------~~~~~~p~~~~~l 147 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDC-----TVMVWEIPDGGLVLPLREPVITLE---GHTKRV------GIVAWHPTAQNVL 147 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTS-----EEEEEECCTTCCSSCBCSCSEEEE---CCSSCE------EEEEECSSBTTEE
T ss_pred CCEEEEEeCCCCCCEEEEEeCCC-----eEEEEEccCCCCccccCCceEEec---CCCCeE------EEEEECcCCCCEE
Confidence 4689999999 888888776543 455662 22 1122222 122222 7899999995444
Q ss_pred EEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccC-CCCCCccceEEE
Q 003363 224 YVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVW 302 (826)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~-~~~~~~~~~~~w 302 (826)
+++.. +..|.+||+.+++...... ......+..++|
T Consensus 148 ~s~~~-------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 184 (402)
T 2aq5_A 148 LSAGC-------------------------------------------DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDW 184 (402)
T ss_dssp EEEET-------------------------------------------TSCEEEEETTTTEEEEEECTTTCCSCEEEEEE
T ss_pred EEEcC-------------------------------------------CCEEEEEECCCCCccEEEecCCCCCceEEEEE
Confidence 44321 2569999999887654410 123446788999
Q ss_pred eeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc-eec-CCCCcc-ccCcee
Q 003363 303 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNL-TESISS-AFFPRF 379 (826)
Q Consensus 303 SPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~L-t~~~~~-~~~p~~ 379 (826)
+|||+. |+..+ .+..|+++|+ .+++. ..+ ..+.+. .....|
T Consensus 185 ~~~~~~----l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 185 SRDGAL----ICTSC---------------RDKRVRVIEP-----------------RKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp CTTSSC----EEEEE---------------TTSEEEEEET-----------------TTTEEEEEEECSSCSSSCCEEEE
T ss_pred CCCCCE----EEEEe---------------cCCcEEEEeC-----------------CCCceeeeeccCCCCCcceEEEE
Confidence 999998 88776 3347899998 44443 344 344333 677899
Q ss_pred cCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEE
Q 003363 380 SPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTML 459 (826)
Q Consensus 380 SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~ 459 (826)
+|||+.|+...... ....|.+||+.++....... ..+ ....+..+.|+|||+.|+
T Consensus 229 ~~~~~~l~~g~~~~--------~d~~i~iwd~~~~~~~~~~~---------~~~--------~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 229 VSEGKILTTGFSRM--------SERQVALWDTKHLEEPLSLQ---------ELD--------TSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp CSTTEEEEEEECTT--------CCEEEEEEETTBCSSCSEEE---------ECC--------CCSSCEEEEEETTTTEEE
T ss_pred cCCCcEEEEeccCC--------CCceEEEEcCccccCCceEE---------ecc--------CCCceeEEEEcCCCCEEE
Confidence 99999777653221 23579999987755311100 000 011345678999999887
Q ss_pred EEEEeCCeEEEEEEECCCCc--EEEecCC--CCCeeeEEEeecCCEE
Q 003363 460 LSSIWGSSQVIISVNVSSGE--LLRITPA--ESNFSWSLLTLDGDNI 502 (826)
Q Consensus 460 ~~~~~~~~~~l~~vdl~tg~--~~~lt~~--~~~~~~~~~s~dg~~l 502 (826)
++...++...+ +|+.+++ ...+... ...+....|++++..+
T Consensus 284 ~~g~~dg~i~i--~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~ 328 (402)
T 2aq5_A 284 LCGKGDSSIRY--FEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLE 328 (402)
T ss_dssp EEETTCSCEEE--EEECSSTTCEEEEEEECCSSCCSEEEECCGGGSC
T ss_pred EEEcCCCeEEE--EEecCCCcceEeecccccCCcccceEEecccccc
Confidence 66544454444 4555666 5555432 2344556788887654
No 319
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.23 E-value=8e-10 Score=140.01 Aligned_cols=239 Identities=10% Similarity=0.084 Sum_probs=133.9
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003363 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (826)
Q Consensus 102 ~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (826)
-.+||||+.++... ....+.++++.+. .....+.... ..+...+|||||++||.....+ .
T Consensus 621 ~~~s~~~~~l~s~~---------~d~~i~vw~~~~~-~~~~~~~~h~-----~~v~~~~~s~~~~~l~s~~~d~-----~ 680 (1249)
T 3sfz_A 621 ACFSQDGQRIASCG---------ADKTLQVFKAETG-EKLLDIKAHE-----DEVLCCAFSSDDSYIATCSADK-----K 680 (1249)
T ss_dssp EEECTTSSEEEEEE---------TTSCEEEEETTTC-CEEEEECCCS-----SCEEEEEECTTSSEEEEEETTS-----E
T ss_pred EEECCCCCEEEEEe---------CCCeEEEEECCCC-CEEEEeccCC-----CCEEEEEEecCCCEEEEEeCCC-----e
Confidence 34588998876532 2345666665322 2223333222 4688999999999999876543 5
Q ss_pred EEEec--CCceeEEEecCCCccccccCCCcccceeecCCCC--eEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcc
Q 003363 182 FELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDET--LIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 257 (826)
Q Consensus 182 ~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~--~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (826)
+.+|+ .++...... +..+.| ..+.|+|+++ .++..+.+.... .|+............+.......
T Consensus 681 v~vwd~~~~~~~~~~~---~~~~~v------~~~~~~~~~~~~~l~sg~~d~~v~--vwd~~~~~~~~~~~~h~~~v~~~ 749 (1249)
T 3sfz_A 681 VKIWDSATGKLVHTYD---EHSEQV------NCCHFTNKSNHLLLATGSNDFFLK--LWDLNQKECRNTMFGHTNSVNHC 749 (1249)
T ss_dssp EEEEETTTCCEEEEEE---CCSSCE------EEEEECSSSSCCEEEEEETTSCEE--EEETTSSSEEEEECCCSSCEEEE
T ss_pred EEEEECCCCceEEEEc---CCCCcE------EEEEEecCCCceEEEEEeCCCeEE--EEECCCcchhheecCCCCCEEEE
Confidence 67773 344333332 222222 7899999655 444444444322 33332222222233445555667
Q ss_pred eeecCCCccCCCccCceEEEEEccCCceEeccCC------------CCCCccceEEEeeCCCCCccEEEEEeecCcceee
Q 003363 258 DWEEDWGETYAGKRQPSLFVININSGEVQAVKGI------------PKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKL 325 (826)
Q Consensus 258 ~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~------------~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~ 325 (826)
.|.++....+++.....|.+||+.+++....... .....+..++|+|||+. |+..+. .....+
T Consensus 750 ~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~----l~~~~~-~~v~~~ 824 (1249)
T 3sfz_A 750 RFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK----IIVAAK-NKVLLF 824 (1249)
T ss_dssp EECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE----EEEEET-TEEEEE
T ss_pred EEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE----EEEEcC-CcEEEE
Confidence 7888855556666678899999987754322100 01123456678888876 665542 110000
Q ss_pred e--------------------e--------eeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCc
Q 003363 326 G--------------------I--------KYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFP 377 (826)
Q Consensus 326 g--------------------~--------~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p 377 (826)
. . ......+..|..+|+. .......+..+...+...
T Consensus 825 d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~----------------~~~~~~~~~~h~~~v~~v 888 (1249)
T 3sfz_A 825 DIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID----------------SRLKVADCRGHLSWVHGV 888 (1249)
T ss_dssp ETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETT----------------TTEEEEEECCCSSCEEEE
T ss_pred EecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcC----------------CCceeeecCCCccceEEE
Confidence 0 0 0011123456677762 223345566677778899
Q ss_pred eecCCCCEEEEEecc
Q 003363 378 RFSPDGKFLVFLSAK 392 (826)
Q Consensus 378 ~~SpDG~~l~f~s~~ 392 (826)
.|||||+.|+..+.+
T Consensus 889 ~~spdg~~l~s~s~d 903 (1249)
T 3sfz_A 889 MFSPDGSSFLTASDD 903 (1249)
T ss_dssp EECTTSSEEEEEETT
T ss_pred EECCCCCEEEEEeCC
Confidence 999999998877755
No 320
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.23 E-value=2.1e-08 Score=108.46 Aligned_cols=259 Identities=10% Similarity=0.008 Sum_probs=143.0
Q ss_pred EEEeCCCCCeEEEEecC------CCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCC
Q 003363 158 AVVPSPSGSKLLVVRNP------ENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (826)
Q Consensus 158 ~~~~SPdG~~la~~~~~------~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~ 230 (826)
.+++||||++|++.... +.....+..++ ...+....+.+..... .-....-..+.|||||++|++.....
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~--~~~g~~p~~~~~spDG~~l~v~n~~~- 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR--FDVGPYSWMNANTPNNADLLFFQFAA- 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc--cccCCCccceEECCCCCEEEEEecCC-
Confidence 88999999999876531 11123355555 3444444444431000 00000115789999999998864321
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEec-cCCCCCCccceEEEeeCCCCC
Q 003363 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGL 309 (826)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l-~~~~~~~~~~~~~wSPDg~~~ 309 (826)
...|.++| +++++... ...+ +.+.+.|+|+.
T Consensus 147 -----------------------------------------~~~v~viD-~t~~~~~~~i~~~-----~~~~~~~~~~~- 178 (373)
T 2mad_H 147 -----------------------------------------GPAVGLVV-QGGSSDDQLLSSP-----TCYHIHPGAPS- 178 (373)
T ss_pred -----------------------------------------CCeEEEEE-CCCCEEeEEcCCC-----ceEEEEeCCCc-
Confidence 25799999 99886532 2122 12566788876
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceec------CCCCccccCceecCCC
Q 003363 310 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL------TESISSAFFPRFSPDG 383 (826)
Q Consensus 310 ~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L------t~~~~~~~~p~~SpDG 383 (826)
.++..+ .+..+..+|. . +...... .........|.+++|+
T Consensus 179 ---~~~~~~--------------~dg~~~~vd~-~----------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 179 ---TFYLLC--------------AQGGLAKTDH-A----------------GGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred ---eEEEEc--------------CCCCEEEEEC-C----------------CcEEEEEeccccccCCcceeecceeEecC
Confidence 655432 1224556664 1 1111011 1111122457889999
Q ss_pred CEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCC-CCcccccCCCCCCccccCCCEEEEEE
Q 003363 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD-CFPGLYSSSILSNPWLSDGCTMLLSS 462 (826)
Q Consensus 384 ~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~f~g~~~~~~~~~~ws~Dg~~l~~~~ 462 (826)
..++|.+.. .+++++|+.++....+. .+...... ...+....+...+.+++||+++|+..
T Consensus 225 ~~~~~~~~~-----------~~v~vid~~~~~~~v~~--------~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~ 285 (373)
T 2mad_H 225 GRIVWPVYS-----------GKILQADISAAGATNKA--------PIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLT 285 (373)
T ss_pred CEEEEEcCC-----------ceEEEEeccCCcceEee--------eeeecCCcccccceecCceEeEEECCCCCEEEEEe
Confidence 998888732 36999998765432111 01000000 00000000112356899999998876
Q ss_pred EeC-------CeEEEEEEECCCCcE-EEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 463 IWG-------SSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 463 ~~~-------~~~~l~~vdl~tg~~-~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
... ....|+.+|++++++ .+|..+. ......+++||+.++++..... ..|.++|..+.
T Consensus 286 ~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~--~~V~ViD~~t~ 351 (373)
T 2mad_H 286 SEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSAGT--EVLHIYDAGAG 351 (373)
T ss_pred ccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcCCC--CeEEEEECCCC
Confidence 432 235799999999887 5564433 2445689999996666654322 46888887654
No 321
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.20 E-value=5.2e-10 Score=122.92 Aligned_cols=201 Identities=14% Similarity=0.168 Sum_probs=130.1
Q ss_pred cceeecC-CCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCc-----
Q 003363 211 EGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE----- 284 (826)
Q Consensus 211 ~~~~wSP-Dg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~----- 284 (826)
..++|+| |++.|+..+.+ ..|.+||+.++.
T Consensus 85 ~~~~~~p~~~~~l~s~s~d--------------------------------------------g~v~vw~~~~~~~~~~~ 120 (402)
T 2aq5_A 85 LDIAWCPHNDNVIASGSED--------------------------------------------CTVMVWEIPDGGLVLPL 120 (402)
T ss_dssp EEEEECTTCTTEEEEEETT--------------------------------------------SEEEEEECCTTCCSSCB
T ss_pred EEEEeCCCCCCEEEEEeCC--------------------------------------------CeEEEEEccCCCCcccc
Confidence 8999999 88888776433 568999988763
Q ss_pred ---eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCC
Q 003363 285 ---VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 361 (826)
Q Consensus 285 ---~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 361 (826)
+..+ ......+..++|+|||+. +++++. .+..|+++|+ .+
T Consensus 121 ~~~~~~~--~~h~~~v~~~~~~p~~~~----~l~s~~--------------~dg~i~iwd~-----------------~~ 163 (402)
T 2aq5_A 121 REPVITL--EGHTKRVGIVAWHPTAQN----VLLSAG--------------CDNVILVWDV-----------------GT 163 (402)
T ss_dssp CSCSEEE--ECCSSCEEEEEECSSBTT----EEEEEE--------------TTSCEEEEET-----------------TT
T ss_pred CCceEEe--cCCCCeEEEEEECcCCCC----EEEEEc--------------CCCEEEEEEC-----------------CC
Confidence 2333 233456788999999976 666652 2347889998 44
Q ss_pred Cc-ceec--CCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCC
Q 003363 362 LP-VVNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCF 438 (826)
Q Consensus 362 ~~-~~~L--t~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f 438 (826)
++ ...+ ..+...+....|+|||+.|+..+.+ ..|++||+.++.... . +.....+
T Consensus 164 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~iwd~~~~~~~~---------~-~~~~~~~-- 220 (402)
T 2aq5_A 164 GAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----------KRVRVIEPRKGTVVA---------E-KDRPHEG-- 220 (402)
T ss_dssp TEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----------SEEEEEETTTTEEEE---------E-EECSSCS--
T ss_pred CCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----------CcEEEEeCCCCceee---------e-eccCCCC--
Confidence 44 4455 5566778899999999998877644 469999987754311 1 1000000
Q ss_pred cccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcE--EEec-CCCCCeeeEEEeecCCEEEEEEeCCCCCCeE
Q 003363 439 PGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL--LRIT-PAESNFSWSLLTLDGDNIIAVSSSPVDVPQV 515 (826)
Q Consensus 439 ~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~--~~lt-~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l 515 (826)
..+..+.|+|||+.|+.......+..|..+|+.+++. .... .....+....|+++++.+++...... .|
T Consensus 221 -----~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg---~i 292 (402)
T 2aq5_A 221 -----TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS---SI 292 (402)
T ss_dssp -----SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS---CE
T ss_pred -----CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC---eE
Confidence 0134678999998555443334567788889887653 2222 22334566788999998776664333 36
Q ss_pred EEEeeccc
Q 003363 516 KYGYFVDK 523 (826)
Q Consensus 516 ~~~~~~~~ 523 (826)
.+.++...
T Consensus 293 ~i~d~~~~ 300 (402)
T 2aq5_A 293 RYFEITSE 300 (402)
T ss_dssp EEEEECSS
T ss_pred EEEEecCC
Confidence 67776543
No 322
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.20 E-value=1.1e-09 Score=117.29 Aligned_cols=115 Identities=10% Similarity=0.052 Sum_probs=65.0
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
....++|||||+++++.... ...++.++ ..++....+....... ........+.|||||++|++...+.....
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~---~~~i~~~d~~t~~~~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 117 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNH---YGDIYGIDLDTCKNTFHANLSSVPG---EVGRSMYSFAISPDGKEVYATVNPTQRLN 117 (349)
T ss_dssp SSCEEEECTTSSEEEEEETT---TTEEEEEETTTTEEEEEEESCCSTT---EEEECSSCEEECTTSSEEEEEEEEEEECS
T ss_pred CCceeEECCCCCEEEEEeCC---CCcEEEEeCCCCcEEEEEEcccccc---cccccccceEECCCCCEEEEEcccccccc
Confidence 36788999999988766532 23466555 4455555444322100 00001168899999999998765421000
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEec-cCCCCCCccceEEEeeCCC
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNE 307 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l-~~~~~~~~~~~~~wSPDg~ 307 (826)
. .|. .....|++||+++++.... ........+..++|+|||+
T Consensus 118 ~-----------------------~~~---------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 118 D-----------------------HYV---------VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS 160 (349)
T ss_dssp S-----------------------CEE---------ECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC
T ss_pred c-----------------------ccc---------cCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc
Confidence 0 000 0236899999988654322 1011222466788999998
No 323
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.20 E-value=2.1e-09 Score=116.27 Aligned_cols=246 Identities=12% Similarity=0.120 Sum_probs=146.6
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCC--CCeEEEEeecC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEP 229 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPD--g~~ia~~~~~~ 229 (826)
..+...+|||||++||.....+ .+.+|+ .+....+..+ .+..+.| ..+.|+|+ ++.|+..+.+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~-~~h~~~v------~~~~~~~~~~~~~l~s~~~d- 78 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDK-----TIKIFEVEGETHKLIDTL-TGHEGPV------WRVDWAHPKFGTILASCSYD- 78 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTS-----CEEEEEEETTEEEEEEEE-CCCSSCE------EEEEECCGGGCSEEEEEETT-
T ss_pred ccEEEEEEcCCCCEEEEEECCC-----cEEEEecCCCcceeeeEe-cCCCCcE------EEEEeCCCCCCCEEEEeccC-
Confidence 4588999999999999876532 355552 1222222222 2222333 78999988 8888876443
Q ss_pred CCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEecc-CCCCCCccceEEEeeC--C
Q 003363 230 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPL--N 306 (826)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~-~~~~~~~~~~~~wSPD--g 306 (826)
..|.+||+.+++...+. -......+..++|+|+ |
T Consensus 79 -------------------------------------------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 115 (379)
T 3jrp_A 79 -------------------------------------------GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG 115 (379)
T ss_dssp -------------------------------------------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC
T ss_pred -------------------------------------------CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCC
Confidence 46899999988632221 0334456889999999 7
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecC-----
Q 003363 307 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSP----- 381 (826)
Q Consensus 307 ~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~Sp----- 381 (826)
+. |+..+ .+..|.++|+... .......+..+...+..+.|+|
T Consensus 116 ~~----l~~~~---------------~d~~i~v~d~~~~--------------~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 116 PL----LLVAS---------------SDGKVSVVEFKEN--------------GTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp SE----EEEEE---------------TTSEEEEEECCTT--------------SCCCEEEEECCTTCEEEEEECCCC---
T ss_pred CE----EEEec---------------CCCcEEEEecCCC--------------CceeeEEecCCCCceEEEEEcCccccc
Confidence 76 66665 3347888887210 1122344556666788899999
Q ss_pred --------CCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCcccc
Q 003363 382 --------DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 453 (826)
Q Consensus 382 --------DG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~ 453 (826)
||+.|+..+.+ ..|++||+.++.... ........ +...+..+.|+|
T Consensus 163 ~~~~~~~~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~------~~~~~~~~---------h~~~v~~~~~sp 216 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGAD-----------NLVKIWKYNSDAQTY------VLESTLEG---------HSDWVRDVAWSP 216 (379)
T ss_dssp -------CTTCEEEEEETT-----------SCEEEEEEETTTTEE------EEEEEECC---------CSSCEEEEEECC
T ss_pred cccccCCCCCCEEEEEeCC-----------CeEEEEEecCCCcce------eeEEEEec---------ccCcEeEEEECC
Confidence 78988877654 358888887654310 01110100 112345778999
Q ss_pred C---CCEEEEEEEeCCeEEEEEEECCCCc---EEEecC---CCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 003363 454 D---GCTMLLSSIWGSSQVIISVNVSSGE---LLRITP---AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 454 D---g~~l~~~~~~~~~~~l~~vdl~tg~---~~~lt~---~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
| ++ ++++...++...+| |+.+++ ...+.. ....+....|+++++.++....+ . .+.+.++.
T Consensus 217 ~~~~~~-~l~s~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d--g--~i~iw~~~ 286 (379)
T 3jrp_A 217 TVLLRS-YLASVSQDRTCIIW--TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD--N--KVTLWKEN 286 (379)
T ss_dssp CCSSSE-EEEEEETTSCEEEE--EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS--S--SEEEEEEE
T ss_pred CCCCCC-eEEEEeCCCEEEEE--eCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC--C--cEEEEeCC
Confidence 9 55 55666656665665 444543 233322 22345566889999876655542 2 25555543
No 324
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.19 E-value=2e-09 Score=117.81 Aligned_cols=248 Identities=12% Similarity=0.064 Sum_probs=141.7
Q ss_pred cCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003363 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (826)
Q Consensus 103 ~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (826)
.++|||+.++... ....+.++++.+. .....+.... ..+...+|+|||++|+..+..+ .+
T Consensus 130 ~~s~dg~~l~s~~---------~d~~i~iwd~~~~-~~~~~~~~h~-----~~v~~~~~~p~~~~l~s~s~d~-----~v 189 (393)
T 1erj_A 130 CFSPDGKFLATGA---------EDRLIRIWDIENR-KIVMILQGHE-----QDIYSLDYFPSGDKLVSGSGDR-----TV 189 (393)
T ss_dssp EECTTSSEEEEEE---------TTSCEEEEETTTT-EEEEEECCCS-----SCEEEEEECTTSSEEEEEETTS-----EE
T ss_pred EECCCCCEEEEEc---------CCCeEEEEECCCC-cEEEEEccCC-----CCEEEEEEcCCCCEEEEecCCC-----cE
Confidence 3489999886532 2345666665322 1122232222 4588999999999998776543 56
Q ss_pred EEec--CCceeEEEecCCCccccccCCCcccceeecC-CCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCccee
Q 003363 183 ELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (826)
Q Consensus 183 ~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSP-Dg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (826)
.+|+ .++..........+ ..+.|+| ||+.|+..+.+
T Consensus 190 ~iwd~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~l~~~s~d------------------------------- 228 (393)
T 1erj_A 190 RIWDLRTGQCSLTLSIEDGV----------TTVAVSPGDGKYIAAGSLD------------------------------- 228 (393)
T ss_dssp EEEETTTTEEEEEEECSSCE----------EEEEECSTTCCEEEEEETT-------------------------------
T ss_pred EEEECCCCeeEEEEEcCCCc----------EEEEEECCCCCEEEEEcCC-------------------------------
Confidence 7773 34333333332222 6889999 89988876543
Q ss_pred ecCCCccCCCccCceEEEEEccCCceEe-ccC-----CCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccC
Q 003363 260 EEDWGETYAGKRQPSLFVININSGEVQA-VKG-----IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNR 333 (826)
Q Consensus 260 ~~d~g~~~~~~~~~~l~v~d~~~g~~~~-l~~-----~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~ 333 (826)
..|.+||+.+++... +.. ......+..++|+|||+. |+..+ .
T Consensus 229 -------------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~----l~s~s---------------~ 276 (393)
T 1erj_A 229 -------------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS----VVSGS---------------L 276 (393)
T ss_dssp -------------SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE----EEEEE---------------T
T ss_pred -------------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE----EEEEe---------------C
Confidence 468889988876543 210 122345778999999997 76555 2
Q ss_pred CCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCC
Q 003363 334 PCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 412 (826)
Q Consensus 334 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~ 412 (826)
+..|.++|+........ ......+. ...+..+...+....|+|||++|+..+.+ ..|++||+.
T Consensus 277 d~~v~~wd~~~~~~~~~-----~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D-----------~~v~iwd~~ 340 (393)
T 1erj_A 277 DRSVKLWNLQNANNKSD-----SKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD-----------RGVLFWDKK 340 (393)
T ss_dssp TSEEEEEEC--------------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT-----------SEEEEEETT
T ss_pred CCEEEEEECCCCCCccc-----ccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC-----------CeEEEEECC
Confidence 33677777631100000 00001111 23445566667889999999998866644 458999988
Q ss_pred CCCCCCcccceee-eeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEE
Q 003363 413 TNGNFSSLEKIVD-VIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 474 (826)
Q Consensus 413 ~~~~~~~~~~~~~-~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vd 474 (826)
++.......+... +..+. -.....|+||++ ++++...++...||.+.
T Consensus 341 ~~~~~~~l~~h~~~v~~v~--------------~~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 341 SGNPLLMLQGHRNSVISVA--------------VANGSSLGPEYN-VFATGSGDCKARIWKYK 388 (393)
T ss_dssp TCCEEEEEECCSSCEEEEE--------------ECSSCTTCTTCE-EEEEEETTSEEEEEEEE
T ss_pred CCeEEEEECCCCCCEEEEE--------------ecCCcCcCCCCC-EEEEECCCCcEEECccc
Confidence 7654321111110 11100 001234567776 55666777777888664
No 325
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.19 E-value=8.6e-09 Score=110.84 Aligned_cols=254 Identities=12% Similarity=0.044 Sum_probs=141.1
Q ss_pred cccEEEEeCCC----CCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecC-CCCeEEEEe
Q 003363 154 TGASAVVPSPS----GSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS-DETLIAYVA 226 (826)
Q Consensus 154 ~~~~~~~~SPd----G~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSP-Dg~~ia~~~ 226 (826)
..+...+|+|+ |+.|+.....+ .+.+|+ .++....+. ...+.| ..+.|+| |++.|+..+
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~---~~~~~i------~~~~~~~~~~~~l~s~~ 135 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRG-----IIRIINPITMQCIKHYV---GHGNAI------NELKFHPRDPNLLLSVS 135 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTC-----EEEEECTTTCCEEEEEE---SCCSCE------EEEEECSSCTTEEEEEE
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCC-----EEEEEEchhceEeeeec---CCCCcE------EEEEECCCCCCEEEEEe
Confidence 35888999999 66777765543 566773 344433332 222223 7999999 888887764
Q ss_pred ecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccC--CCCCCccceEEEee
Q 003363 227 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG--IPKSLSVGQVVWAP 304 (826)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~--~~~~~~~~~~~wSP 304 (826)
.+ ..|.+||+.+++...... ......+..++|+|
T Consensus 136 ~d--------------------------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 136 KD--------------------------------------------HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp TT--------------------------------------------SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred CC--------------------------------------------CeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 32 569999999887655410 13345678999999
Q ss_pred CCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhh-----cCCC-------CCCcceecCCCCc
Q 003363 305 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELK-----ESSS-------EDLPVVNLTESIS 372 (826)
Q Consensus 305 Dg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~-----~~~~-------~~~~~~~Lt~~~~ 372 (826)
||+. |+..+ .+..|+++|+............. .... .......+..+..
T Consensus 172 ~~~~----l~~~~---------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (366)
T 3k26_A 172 LGEK----IMSCG---------------MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRN 232 (366)
T ss_dssp TSSE----EEEEE---------------TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSS
T ss_pred CCCE----EEEec---------------CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcc
Confidence 9997 77665 23468888874221110000000 0000 0000111222455
Q ss_pred cccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCC--cccceeeeeeeeeccCCCCCcccccCCCCCCc
Q 003363 373 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFS--SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNP 450 (826)
Q Consensus 373 ~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ 450 (826)
.+....|+ |+.|+..+.+ ..|.+||+.++.... +.........+..... ....+..+.
T Consensus 233 ~v~~~~~~--~~~l~~~~~d-----------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~ 292 (366)
T 3k26_A 233 YVDCVRWL--GDLILSKSCE-----------NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDY-------SQCDIWYMR 292 (366)
T ss_dssp CCCEEEEE--TTEEEEECSS-----------SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEEC-------SSCCSSCCC
T ss_pred eEEEEEEc--CCEEEEEecC-----------CEEEEEeCCCccccccccccCCcchheeccccc-------cCCcEEEEE
Confidence 67778888 6676655543 468889987754421 1111111111110000 122456788
Q ss_pred cccC--CCEEEEEEEeCCeEEEEEEECCCCc-----EEEecCC--CCCeeeEEEeecCCEEEEEEe
Q 003363 451 WLSD--GCTMLLSSIWGSSQVIISVNVSSGE-----LLRITPA--ESNFSWSLLTLDGDNIIAVSS 507 (826)
Q Consensus 451 ws~D--g~~l~~~~~~~~~~~l~~vdl~tg~-----~~~lt~~--~~~~~~~~~s~dg~~l~~~~s 507 (826)
|+|| |+.|+.. ..++ .|..+|+.+++ ...+... ...+....|+++++.|+....
T Consensus 293 ~s~~~~~~~l~~~-~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 355 (366)
T 3k26_A 293 FSMDFWQKMLALG-NQVG--KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCD 355 (366)
T ss_dssp CEECTTSSEEEEE-CTTS--CEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred EcCCCCCcEEEEE-ecCC--cEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeC
Confidence 9999 8866543 3334 45666777764 2244443 345666788998887665543
No 326
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.19 E-value=6.8e-10 Score=120.97 Aligned_cols=288 Identities=9% Similarity=0.015 Sum_probs=157.8
Q ss_pred EecCCCCc-ceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCC-CCCeEEEEecCCCCC
Q 003363 101 FNSGNGNG-TQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENES 178 (826)
Q Consensus 101 ~~~~s~dg-~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SP-dG~~la~~~~~~~~~ 178 (826)
.-.++||| +.++... ....+.++++.+.. ....+...+. ...+....||| +|+.|+.....+
T Consensus 78 ~~~~~~~~~~~l~s~~---------~dg~i~iwd~~~~~-~~~~~~~~~h---~~~v~~~~~~~~~~~~l~s~~~d~--- 141 (383)
T 3ei3_B 78 SLEWHPTHPTTVAVGS---------KGGDIILWDYDVQN-KTSFIQGMGP---GDAITGMKFNQFNTNQLFVSSIRG--- 141 (383)
T ss_dssp EEEECSSCTTEEEEEE---------BTSCEEEEETTSTT-CEEEECCCST---TCBEEEEEEETTEEEEEEEEETTT---
T ss_pred EEEECCCCCCEEEEEc---------CCCeEEEEeCCCcc-cceeeecCCc---CCceeEEEeCCCCCCEEEEEeCCC---
Confidence 33458888 5554432 23456666664322 1222221111 14688999999 677777765543
Q ss_pred CeEEEEec-CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcc
Q 003363 179 PIQFELWS-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 257 (826)
Q Consensus 179 ~~~~~i~~-~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (826)
.+.+|+ .+...+.........+. +..+.|+||++.|+..+.+.... .|+. ..........+.......
T Consensus 142 --~i~iwd~~~~~~~~~~~~~~~~~~------v~~~~~~~~~~~l~~~~~d~~i~--i~d~-~~~~~~~~~~h~~~v~~~ 210 (383)
T 3ei3_B 142 --ATTLRDFSGSVIQVFAKTDSWDYW------YCCVDVSVSRQMLATGDSTGRLL--LLGL-DGHEIFKEKLHKAKVTHA 210 (383)
T ss_dssp --EEEEEETTSCEEEEEECCCCSSCC------EEEEEEETTTTEEEEEETTSEEE--EEET-TSCEEEEEECSSSCEEEE
T ss_pred --EEEEEECCCCceEEEeccCCCCCC------eEEEEECCCCCEEEEECCCCCEE--EEEC-CCCEEEEeccCCCcEEEE
Confidence 566773 33333333222222222 37999999999999887765433 2222 111112223345555677
Q ss_pred eeecCCC-ccCCCccCceEEEEEccC----CceEeccCCCCCCccceEEEee-CCCCCccEEEEEeecCcceeeeeeeec
Q 003363 258 DWEEDWG-ETYAGKRQPSLFVININS----GEVQAVKGIPKSLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGIKYCY 331 (826)
Q Consensus 258 ~~~~d~g-~~~~~~~~~~l~v~d~~~----g~~~~l~~~~~~~~~~~~~wSP-Dg~~~~~~lvf~~~~~~~~~~g~~~~~ 331 (826)
.|.++.. ..+++..+..|.+||+.+ ++.... ......+..++|+| ||+. |+..+
T Consensus 211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~----l~~~~-------------- 270 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAE--MPHEKPVNAAYFNPTDSTK----LLTTD-------------- 270 (383)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEE--EECSSCEEEEEECTTTSCE----EEEEE--------------
T ss_pred EECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEE--ecCCCceEEEEEcCCCCCE----EEEEc--------------
Confidence 7888844 345566678999999987 444443 23445678999999 9997 77665
Q ss_pred cCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCC------CccccCceecCCCCEEEEEeccCCCCCCCCcccc
Q 003363 332 NRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTES------ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATD 404 (826)
Q Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~------~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~ 404 (826)
.+..|+++|+. ++. ...+..+ ........|+|++..++.....+....| ....
T Consensus 271 -~d~~i~iwd~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~--s~d~ 330 (383)
T 3ei3_B 271 -QRNEIRVYSSY-----------------DWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLL--NDKR 330 (383)
T ss_dssp -SSSEEEEEETT-----------------BTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCT--TCCC
T ss_pred -CCCcEEEEECC-----------------CCccccccccccccccccccceEEeccCCCCceEEEecCCccccc--CCCC
Confidence 23478888873 222 2222211 1122235788888776644332211112 2346
Q ss_pred eEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECC
Q 003363 405 SLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 476 (826)
Q Consensus 405 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~ 476 (826)
.|++||+.+++....... .. ....+..++|+|||+.|+.. . ++. |..+|++
T Consensus 331 ~i~iwd~~~~~~~~~l~~----------~~-------~~~~~~~~~~s~~g~~l~s~-s-d~~--i~iw~~~ 381 (383)
T 3ei3_B 331 TIDIYDANSGGLVHQLRD----------PN-------AAGIISLNKFSPTGDVLASG-M-GFN--ILIWNRE 381 (383)
T ss_dssp CEEEEETTTCCEEEEECB----------TT-------BCSCCCEEEECTTSSEEEEE-E-TTE--EEEEECC
T ss_pred eEEEEecCCCceeeeecC----------CC-------CCceEEEEEEecCccEEEEe-c-CCc--EEEEecC
Confidence 799999887654211100 00 00112344899999966544 3 444 4444554
No 327
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.18 E-value=5e-10 Score=122.41 Aligned_cols=231 Identities=10% Similarity=-0.007 Sum_probs=134.9
Q ss_pred ceeEEEEEEeecCCC-----CccceeecCCcceecccEEEEeCCC----C---CeEEEEecCCCCCCeEEEEecCCce--
Q 003363 125 RKKFMLSTVISKENE-----NSVTFQWAPFPVEMTGASAVVPSPS----G---SKLLVVRNPENESPIQFELWSQSQL-- 190 (826)
Q Consensus 125 ~~~~l~~~~i~~~~~-----~~~~lt~~~~~~~~~~~~~~~~SPd----G---~~la~~~~~~~~~~~~~~i~~~~~~-- 190 (826)
....+.++++..... ....+.... ..+...+|+|+ | +.|+..... +.-.+|.+......
T Consensus 34 ~dg~i~iw~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~g~~~~~l~s~~~d--g~i~iw~~~~~~~~~~ 106 (397)
T 1sq9_A 34 GDGYLKVWDNKLLDNENPKDKSYSHFVHK-----SGLHHVDVLQAIERDAFELCLVATTSFS--GDLLFYRITREDETKK 106 (397)
T ss_dssp TTSEEEEEESBCCTTCCGGGGEEEEECCT-----TCEEEEEEEEEEETTTEEEEEEEEEETT--SCEEEEEEEECTTTCC
T ss_pred CCCEEEEEECCCcccccCCCcceEEecCC-----CcEEEEEEecccccCCccccEEEEEcCC--CCEEEEEccCCccccc
Confidence 445777777754321 122222222 45889999999 9 888877653 33333333332220
Q ss_pred --eEEEecCCCc--cccccCCCcccceeec----CCCCe-EEEEeecCCCCCCCccCCC------CCCCC-----CC---
Q 003363 191 --EKEFHVPQTV--HGSVYADGWFEGISWN----SDETL-IAYVAEEPSPSKPTFSLGS------TKGGS-----SD--- 247 (826)
Q Consensus 191 --~~~~~~~~~~--~g~v~~~~~~~~~~wS----PDg~~-ia~~~~~~~~~~~~~~~~~------~~~~~-----~~--- 247 (826)
.+........ .+.| ..+.|+ ||++. |+..+.+.... .|+... ..... ..
T Consensus 107 ~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~~~~~~l~~~~~dg~i~--iwd~~~~~~~~~~~~~~~~~~~~~~~~ 178 (397)
T 1sq9_A 107 VIFEKLDLLDSDMKKHSF------WALKWGASNDRLLSHRLVATDVKGTTY--IWKFHPFADESNSLTLNWSPTLELQGT 178 (397)
T ss_dssp EEEEEECCSCTTGGGSCE------EEEEEECCC----CEEEEEEETTSCEE--EEEEESSSSHHHHTTTCCCCEEEEEEE
T ss_pred ccceeecccccccCCCcE------EEEEEeeccCCCCceEEEEEeCCCcEE--EEeCCccccccccceeeccCcceeeee
Confidence 2222211000 1333 799999 99999 88777665433 233211 11111 11
Q ss_pred ----ccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCC---C---CCccceEEEeeCCCCCccEEEEEe
Q 003363 248 ----KDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP---K---SLSVGQVVWAPLNEGLHQYLVFVG 317 (826)
Q Consensus 248 ----~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~---~---~~~~~~~~wSPDg~~~~~~lvf~~ 317 (826)
..+........|.++. ..+++.....|.+||+.+++..... .. . ...+..++|+|||+. |+..+
T Consensus 179 ~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~h~~~~~~i~~i~~~~~~~~----l~~~~ 252 (397)
T 1sq9_A 179 VESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF-ESQHSMINNSNSIRSVKFSPQGSL----LAIAH 252 (397)
T ss_dssp ECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE-ECCC---CCCCCEEEEEECSSTTE----EEEEE
T ss_pred eccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE-eccccccccCCccceEEECCCCCE----EEEEe
Confidence 2234455667788885 6666667789999999988765441 11 2 556789999999997 77665
Q ss_pred ecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCC-------------CCccccCceecCCC
Q 003363 318 WSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTE-------------SISSAFFPRFSPDG 383 (826)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~-------------~~~~~~~p~~SpDG 383 (826)
... ....|+++|+ .+++ ...+.. +...+....|+|||
T Consensus 253 ~d~------------~~g~i~i~d~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 253 DSN------------SFGCITLYET-----------------EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp EET------------TEEEEEEEET-----------------TTCCEEEEECBC--------CCBSBSSCEEEEEECSSS
T ss_pred cCC------------CCceEEEEEC-----------------CCCcccceeccCcccccccccccccCCcEEEEEECCCC
Confidence 210 1136888887 3333 344444 55668889999999
Q ss_pred CEEEEEeccCCCCCCCCcccceEEEEeCCCCCC
Q 003363 384 KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (826)
Q Consensus 384 ~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~ 416 (826)
++|+..+.+ ..|++||+.+++.
T Consensus 304 ~~l~~~~~d-----------g~i~iwd~~~~~~ 325 (397)
T 1sq9_A 304 ETLCSAGWD-----------GKLRFWDVKTKER 325 (397)
T ss_dssp SEEEEEETT-----------SEEEEEETTTTEE
T ss_pred CEEEEEeCC-----------CeEEEEEcCCCce
Confidence 998866643 4699999877543
No 328
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.18 E-value=2.5e-09 Score=112.12 Aligned_cols=237 Identities=12% Similarity=0.163 Sum_probs=138.0
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec-CC---ceeEEEecCCCccccccCCCcccceeecCC--CCeEEEEee
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS-QS---QLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAE 227 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~-~~---~~~~~~~~~~~~~g~v~~~~~~~~~~wSPD--g~~ia~~~~ 227 (826)
..+...+|||||++||..+.++ .+.+|+ .+ +....+ .+..+.| ..++|+|+ |+.||..+.
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~-----~v~iw~~~~~~~~~~~~l---~gH~~~V------~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDK-----TIKIFEVEGETHKLIDTL---TGHEGPV------WRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEEBCSSCBCCCEEE---CCCSSCE------EEEEECCGGGCSEEEEEET
T ss_pred CceEEEEECCCCCEEEEEeCCC-----EEEEEecCCCCcEEEEEE---ccccCCe------EEEEecCCCcCCEEEEEcC
Confidence 3588899999999999876543 455662 21 222222 2333334 78999974 888887654
Q ss_pred cCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccC-CCCCCccceEEEeeC-
Q 003363 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG-IPKSLSVGQVVWAPL- 305 (826)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~-~~~~~~~~~~~wSPD- 305 (826)
+ ..|.+||+.+++...+.. ......+..++|+|+
T Consensus 76 D--------------------------------------------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 111 (297)
T 2pm7_B 76 D--------------------------------------------GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHE 111 (297)
T ss_dssp T--------------------------------------------TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGG
T ss_pred C--------------------------------------------CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCC
Confidence 3 578999998875322210 223446788999998
Q ss_pred -CCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCC--
Q 003363 306 -NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPD-- 382 (826)
Q Consensus 306 -g~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpD-- 382 (826)
|+. |+..+ .+..|.++|+... .......+..+...+....|+|+
T Consensus 112 ~g~~----l~s~s---------------~d~~v~~wd~~~~--------------~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 112 YGPM----LLVAS---------------SDGKVSVVEFKEN--------------GTTSPIIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp GCSE----EEEEE---------------TTSEEEEEEBCSS--------------SCBCCEEEECCSSCEEEEEECCCC-
T ss_pred CCcE----EEEEE---------------CCCcEEEEEecCC--------------CceeeeeeecccCccceEeecCCcc
Confidence 665 65554 2346788887210 01113345556667788899997
Q ss_pred -----------CCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCcc
Q 003363 383 -----------GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW 451 (826)
Q Consensus 383 -----------G~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~w 451 (826)
+++|+..+.+ ..|.+||+.++.... .+...+. | +...+..++|
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D-----------~~v~lwd~~~~~~~~------~~~~~l~--------~-H~~~V~~v~~ 212 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGAD-----------NLVKIWKYNSDAQTY------VLESTLE--------G-HSDWVRDVAW 212 (297)
T ss_dssp -----------CCEEEEEETT-----------SCEEEEEEETTTTEE------EEEEEEC--------C-CSSCEEEEEE
T ss_pred cccccCCCCCCcceEEEEcCC-----------CcEEEEEEcCCCceE------EEEEEec--------C-CCCceEEEEE
Confidence 4666655544 347788876644210 0011000 0 1123457889
Q ss_pred ccCC--CEEEEEEEeCCeEEEEEEECCCCcE-EEec---CCCCCeeeEEEeecCCEEEEEEe
Q 003363 452 LSDG--CTMLLSSIWGSSQVIISVNVSSGEL-LRIT---PAESNFSWSLLTLDGDNIIAVSS 507 (826)
Q Consensus 452 s~Dg--~~l~~~~~~~~~~~l~~vdl~tg~~-~~lt---~~~~~~~~~~~s~dg~~l~~~~s 507 (826)
+||+ ..++++...++...||.++...+.. ..+. .....+....|+++++.|+....
T Consensus 213 sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred CCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC
Confidence 9996 3566677777777777655322222 2222 11223455678999886655443
No 329
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.17 E-value=2.9e-09 Score=116.87 Aligned_cols=239 Identities=12% Similarity=0.099 Sum_probs=152.9
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 156 ASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
.....||+ +.++.....+ .+.+| ..++........ ..+. +..++|+|||+.|+..+.+
T Consensus 96 ~~~~~~s~--~~l~~~~~d~-----~v~lw~~~~~~~~~~~~~~--~~~~------v~~v~~s~~~~~l~~~~~d----- 155 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALER-----NVYVWNADSGSVSALAETD--ESTY------VASVKWSHDGSFLSVGLGN----- 155 (401)
T ss_dssp CBCEEECT--TSEEEEEETT-----EEEEEETTTCCEEEEEECC--TTCC------EEEEEECTTSSEEEEEETT-----
T ss_pred EEEEeecC--CCEEEEECCC-----eEEEeeCCCCcEeEeeecC--CCCC------EEEEEECCCCCEEEEECCC-----
Confidence 33466665 4455554433 45666 345555555432 2222 2799999999999886533
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEE
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (826)
..|.+||+.+++..... ......+..++| +++. |
T Consensus 156 ---------------------------------------g~i~iwd~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l 189 (401)
T 4aez_A 156 ---------------------------------------GLVDIYDVESQTKLRTM-AGHQARVGCLSW--NRHV----L 189 (401)
T ss_dssp ---------------------------------------SCEEEEETTTCCEEEEE-CCCSSCEEEEEE--ETTE----E
T ss_pred ---------------------------------------CeEEEEECcCCeEEEEe-cCCCCceEEEEE--CCCE----E
Confidence 46899999887754431 334446677888 4554 5
Q ss_pred EEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccC
Q 003363 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 393 (826)
Q Consensus 314 vf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~ 393 (826)
+..+ .+..|+.+|+.. .......+..+...+....|+|||+.|+..+.+
T Consensus 190 ~~~~---------------~dg~i~i~d~~~---------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d- 238 (401)
T 4aez_A 190 SSGS---------------RSGAIHHHDVRI---------------ANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND- 238 (401)
T ss_dssp EEEE---------------TTSEEEEEETTS---------------SSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-
T ss_pred EEEc---------------CCCCEEEEeccc---------------CcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC-
Confidence 5544 334788899821 123355666677788899999999998877654
Q ss_pred CCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003363 394 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (826)
Q Consensus 394 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~v 473 (826)
..|.+||+.++........ ....+..+.|+|++..++++.....+..|..+
T Consensus 239 ----------~~v~iwd~~~~~~~~~~~~-------------------~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 239 ----------NVVQIWDARSSIPKFTKTN-------------------HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp ----------SCEEEEETTCSSEEEEECC-------------------CSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred ----------CeEEEccCCCCCccEEecC-------------------CcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 3589999887443211000 11235578899999878776543345668888
Q ss_pred ECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 474 NVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 474 dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
|+.+++..........+....|+++++.++......+. .+.+.++..
T Consensus 290 d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg--~i~v~~~~~ 336 (401)
T 4aez_A 290 NAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDN--NLSIWSYSS 336 (401)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTC--EEEEEEEET
T ss_pred ECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCC--cEEEEecCC
Confidence 99888877665555566777899999987776543333 466666544
No 330
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.15 E-value=1.4e-08 Score=108.66 Aligned_cols=163 Identities=9% Similarity=0.006 Sum_probs=106.5
Q ss_pred cceeecC--CCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEec
Q 003363 211 EGISWNS--DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV 288 (826)
Q Consensus 211 ~~~~wSP--Dg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l 288 (826)
..+.|+| +|+.|+..+.+ ..|.+||+.+++...+
T Consensus 129 ~~~~~~~~~~~~~l~s~s~d--------------------------------------------g~i~~wd~~~~~~~~~ 164 (343)
T 3lrv_A 129 IYMYGHNEVNTEYFIWADNR--------------------------------------------GTIGFQSYEDDSQYIV 164 (343)
T ss_dssp EEEECCC---CCEEEEEETT--------------------------------------------CCEEEEESSSSCEEEE
T ss_pred EEEEcCCCCCCCEEEEEeCC--------------------------------------------CcEEEEECCCCcEEEE
Confidence 7899999 99988876543 4689999999887654
Q ss_pred cCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc--ee
Q 003363 289 KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV--VN 366 (826)
Q Consensus 289 ~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~ 366 (826)
........+..++|+|||+. |+..+ .+..|.++|+ .+++. ..
T Consensus 165 ~~~~~~~~i~~~~~~pdg~~----lasg~---------------~dg~i~iwd~-----------------~~~~~~~~~ 208 (343)
T 3lrv_A 165 HSAKSDVEYSSGVLHKDSLL----LALYS---------------PDGILDVYNL-----------------SSPDQASSR 208 (343)
T ss_dssp ECCCSSCCCCEEEECTTSCE----EEEEC---------------TTSCEEEEES-----------------SCTTSCCEE
T ss_pred EecCCCCceEEEEECCCCCE----EEEEc---------------CCCEEEEEEC-----------------CCCCCCccE
Confidence 21223335788999999996 65554 3347889998 44443 45
Q ss_pred cCC-CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCC
Q 003363 367 LTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSS 445 (826)
Q Consensus 367 Lt~-~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~ 445 (826)
+.. +...+....|||||++|+..+ + ..|.+||+.++........... ..+ .
T Consensus 209 ~~~~h~~~v~~l~fs~~g~~l~s~~-~-----------~~v~iwd~~~~~~~~~~~~~~~----------~~~------~ 260 (343)
T 3lrv_A 209 FPVDEEAKIKEVKFADNGYWMVVEC-D-----------QTVVCFDLRKDVGTLAYPTYTI----------PEF------K 260 (343)
T ss_dssp CCCCTTSCEEEEEECTTSSEEEEEE-S-----------SBEEEEETTSSTTCBSSCCCBC--------------------
T ss_pred EeccCCCCEEEEEEeCCCCEEEEEe-C-----------CeEEEEEcCCCCcceeeccccc----------ccc------c
Confidence 665 677789999999999988766 2 1599999987654221111000 000 1
Q ss_pred C--CCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEE
Q 003363 446 I--LSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 481 (826)
Q Consensus 446 ~--~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~ 481 (826)
. ..++|+|||+.|+..+..++...+|.++.......
T Consensus 261 ~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~ 298 (343)
T 3lrv_A 261 TGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT 298 (343)
T ss_dssp -CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE
T ss_pred ccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceE
Confidence 1 13789999997765443366777777764444433
No 331
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.15 E-value=3.5e-09 Score=112.77 Aligned_cols=287 Identities=11% Similarity=0.023 Sum_probs=154.3
Q ss_pred cccEEEEeCCCC-CeEEEEecCCCCCCeEEEEecCC-ceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSG-SKLLVVRNPENESPIQFELWSQS-QLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG-~~la~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|||++ +.||..+.+ +.-.+|.+.... ........-.+..+.| ..+.|+|||+.|+..+.+...
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D--~~i~vWd~~~~~~~~~~~~~~l~~h~~~V------~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRD--KTIIMWKLTRDETNYGIPQRALRGHSHFV------SDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETT--SCEEEEEECCSSSCSEEEEEEECCCSSCE------EEEEECTTSSEEEEEETTSEE
T ss_pred CCEEEEEEeCCCCCEEEEEcCC--CeEEEEECCCCCcccceeeEEEeCCCCCE------EEEEECCCCCEEEEEcccccc
Confidence 468999999984 666655543 332333333221 1111111112222333 789999999999988766532
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (826)
.. |......................+.++....+++..+..+.+||+.+..............+..+.|++++..
T Consensus 111 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--- 185 (340)
T 4aow_A 111 RL--WDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN--- 185 (340)
T ss_dssp EE--EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS---
T ss_pred eE--EeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC---
Confidence 21 1111000000001111111122334443333444456788999987765544421233445677899999876
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEe
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLS 390 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s 390 (826)
.++.+-. .+..|..+|+ .+++ ...+..+...+....|+|||++|+..+
T Consensus 186 -~~~~s~~-------------~d~~i~i~d~-----------------~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 186 -PIIVSCG-------------WDKLVKVWNL-----------------ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp -CEEEEEE-------------TTSCEEEEET-----------------TTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred -cEEEEEc-------------CCCEEEEEEC-----------------CCCceeeEecCCCCcEEEEEECCCCCEEEEEe
Confidence 4443311 2346888887 4443 455666677788899999999887666
Q ss_pred ccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEE
Q 003363 391 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 470 (826)
Q Consensus 391 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l 470 (826)
.+ ..|.+||+.+......... ...+..+.|+|++. ++.. ..++ .|
T Consensus 235 ~D-----------g~i~iwd~~~~~~~~~~~~--------------------~~~v~~~~~~~~~~-~~~~-~~d~--~i 279 (340)
T 4aow_A 235 KD-----------GQAMLWDLNEGKHLYTLDG--------------------GDIINALCFSPNRY-WLCA-ATGP--SI 279 (340)
T ss_dssp TT-----------CEEEEEETTTTEEEEEEEC--------------------SSCEEEEEECSSSS-EEEE-EETT--EE
T ss_pred CC-----------CeEEEEEeccCceeeeecC--------------------CceEEeeecCCCCc-eeec-cCCC--EE
Confidence 44 4688999877443211000 01233567889886 4333 3344 45
Q ss_pred EEEECCCCcEEEecC----------CCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 471 ISVNVSSGELLRITP----------AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 471 ~~vdl~tg~~~~lt~----------~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
..+|+.++....-.. ....+....|+++++.|+....+ . .|.+-++.++
T Consensus 280 ~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D-g---~v~iW~~~tG 338 (340)
T 4aow_A 280 KIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD-N---LVRVWQVTIG 338 (340)
T ss_dssp EEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT-S---CEEEEEEEC-
T ss_pred EEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC-C---EEEEEeCCCc
Confidence 566777765433221 12234556788898876554332 2 2566665544
No 332
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.14 E-value=8.6e-10 Score=130.55 Aligned_cols=247 Identities=11% Similarity=0.028 Sum_probs=150.5
Q ss_pred cccEEEEeCCCCCe-EEEEecCCCCCCeEEEEec---CCce-eEEEecCCCccccccCCCcccceeecCCCCeEEEEeec
Q 003363 154 TGASAVVPSPSGSK-LLVVRNPENESPIQFELWS---QSQL-EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE 228 (826)
Q Consensus 154 ~~~~~~~~SPdG~~-la~~~~~~~~~~~~~~i~~---~~~~-~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~ 228 (826)
..+...+|+|++.. |+..+..+ .+.+|+ .... ......-.+..+.| ..++|||||+.|+..+.+
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~-----~i~~W~~~~~~~~~~~~~~~~~~h~~~v------~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDK-----SIILWKLTKDDKAYGVAQRRLTGHSHFV------EDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTS-----EEEEEECCCSTTCSCEEEEEEECCSSCE------EEEEECTTSSEEEEEETT
T ss_pred ceeEEEEecCCCCCEEEEEeCCC-----cEEEEEccCCCcccccccceecCCCCcE------EEEEECCCCCEEEEEeCC
Confidence 45888999998754 44444332 566662 1111 11111111222333 789999999999988877
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEecc--CCCCCCccceEEEeeCC
Q 003363 229 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK--GIPKSLSVGQVVWAPLN 306 (826)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~--~~~~~~~~~~~~wSPDg 306 (826)
...+ .|+............+...+....|+++....+++..+..|.+||..+.....+. .......+..++|+|++
T Consensus 452 g~v~--vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 529 (694)
T 3dm0_A 452 GELR--LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT 529 (694)
T ss_dssp SEEE--EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS
T ss_pred CcEE--EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC
Confidence 6544 3332222222233345555667788888666677777889999998766554442 11223357789999998
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCE
Q 003363 307 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKF 385 (826)
Q Consensus 307 ~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~ 385 (826)
... +++++. .+..|.++|+ .++. ...+..+.+.+....|||||++
T Consensus 530 ~~~---~l~s~s--------------~d~~v~vwd~-----------------~~~~~~~~~~~h~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 530 LQP---TIVSAS--------------WDKTVKVWNL-----------------SNCKLRSTLAGHTGYVSTVAVSPDGSL 575 (694)
T ss_dssp SSC---EEEEEE--------------TTSCEEEEET-----------------TTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred Ccc---eEEEEe--------------CCCeEEEEEC-----------------CCCcEEEEEcCCCCCEEEEEEeCCCCE
Confidence 431 344431 3347888998 4443 4566777778899999999999
Q ss_pred EEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeC
Q 003363 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWG 465 (826)
Q Consensus 386 l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~ 465 (826)
|+..+.+ ..|.+||+.++........ ...+..++|+||+..|.. +. +
T Consensus 576 l~sg~~D-----------g~i~iwd~~~~~~~~~~~~--------------------~~~v~~~~~sp~~~~l~~-~~-~ 622 (694)
T 3dm0_A 576 CASGGKD-----------GVVLLWDLAEGKKLYSLEA--------------------NSVIHALCFSPNRYWLCA-AT-E 622 (694)
T ss_dssp EEEEETT-----------SBCEEEETTTTEEEECCBC--------------------SSCEEEEEECSSSSEEEE-EE-T
T ss_pred EEEEeCC-----------CeEEEEECCCCceEEEecC--------------------CCcEEEEEEcCCCcEEEE-Ec-C
Confidence 8876654 3588899877543211100 012346789999975543 32 3
Q ss_pred CeEEEEEEECCCCcEEE
Q 003363 466 SSQVIISVNVSSGELLR 482 (826)
Q Consensus 466 ~~~~l~~vdl~tg~~~~ 482 (826)
+ .|..+|+.+++...
T Consensus 623 ~--~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 623 H--GIKIWDLESKSIVE 637 (694)
T ss_dssp T--EEEEEETTTTEEEE
T ss_pred C--CEEEEECCCCCChh
Confidence 3 37777888877554
No 333
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.14 E-value=1.4e-09 Score=118.73 Aligned_cols=274 Identities=11% Similarity=0.044 Sum_probs=157.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCc------eeEEEecCCCccccccCCCcccceeecCC----C--
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQ------LEKEFHVPQTVHGSVYADGWFEGISWNSD----E-- 219 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~------~~~~~~~~~~~~g~v~~~~~~~~~~wSPD----g-- 219 (826)
..+...+|+| +.|+.....+ .+.+| ..++ ....+. ...+.| ..+.|+|| |
T Consensus 17 ~~i~~~~~~~--~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~---~h~~~v------~~~~~~~~~~~~g~~ 80 (397)
T 1sq9_A 17 ADIFSVSACN--SFTVSCSGDG-----YLKVWDNKLLDNENPKDKSYSHF---VHKSGL------HHVDVLQAIERDAFE 80 (397)
T ss_dssp SCEEEEEECS--SEEEEEETTS-----EEEEEESBCCTTCCGGGGEEEEE---CCTTCE------EEEEEEEEEETTTEE
T ss_pred cCeEEEEecC--CeEEEEcCCC-----EEEEEECCCcccccCCCcceEEe---cCCCcE------EEEEEecccccCCcc
Confidence 4588899999 6777665433 45666 2333 222222 122222 78999999 9
Q ss_pred -CeEEEEeecCCCCCCCccCCCCCC-----CCCCccC-----CCCCCcceee----cCCCc-cCCCccCceEEEEEccC-
Q 003363 220 -TLIAYVAEEPSPSKPTFSLGSTKG-----GSSDKDC-----NSWKGQGDWE----EDWGE-TYAGKRQPSLFVININS- 282 (826)
Q Consensus 220 -~~ia~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~~~~~~~~----~d~g~-~~~~~~~~~l~v~d~~~- 282 (826)
+.|+..+.+.... .|+...... ......+ ........|. ++... .+++.....|++||+.+
T Consensus 81 ~~~l~s~~~dg~i~--iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 158 (397)
T 1sq9_A 81 LCLVATTSFSGDLL--FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPF 158 (397)
T ss_dssp EEEEEEEETTSCEE--EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESS
T ss_pred ccEEEEEcCCCCEE--EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcc
Confidence 9998887766433 233211111 1111222 2444567788 77555 56666778999999987
Q ss_pred -----CceE------eccC-----CCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEccccc
Q 003363 283 -----GEVQ------AVKG-----IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYK 346 (826)
Q Consensus 283 -----g~~~------~l~~-----~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 346 (826)
++.. .+.+ ......+..++|+||| . |+..+ .+..|+++|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~----l~~~~---------------~dg~i~i~d~---- 214 (397)
T 1sq9_A 159 ADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L----IATGF---------------NNGTVQISEL---- 214 (397)
T ss_dssp SSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E----EEEEC---------------TTSEEEEEET----
T ss_pred ccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e----EEEEe---------------CCCcEEEEEC----
Confidence 4432 2211 1234457789999999 8 88776 3347889998
Q ss_pred chhhhhhhhcCCCCCCc-ceecCC---C---CccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCc
Q 003363 347 SEASELELKESSSEDLP-VVNLTE---S---ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS 419 (826)
Q Consensus 347 ~~~~~~~~~~~~~~~~~-~~~Lt~---~---~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~ 419 (826)
.+++ ...+.. + ...+....|+|||+.|+..+.+. ....|.+||+.++.....
T Consensus 215 -------------~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--------~~g~i~i~d~~~~~~~~~ 273 (397)
T 1sq9_A 215 -------------STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--------SFGCITLYETEFGERIGS 273 (397)
T ss_dssp -------------TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--------TEEEEEEEETTTCCEEEE
T ss_pred -------------CCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC--------CCceEEEEECCCCcccce
Confidence 4343 344444 4 66788999999999988776541 124699999887543211
Q ss_pred ccceeeeeeeeeccCCCCCcc-cccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecC------C------
Q 003363 420 LEKIVDVIPVVQCAEGDCFPG-LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITP------A------ 486 (826)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~f~g-~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~------~------ 486 (826)
..... .+....... .....+..+.|+|||+.|+. ...++ .|..+|+.+++...... .
T Consensus 274 ~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1sq9_A 274 LSVPT-------HSSQASLGEFAHSSWVMSLSFNDSGETLCS-AGWDG--KLRFWDVKTKERITTLNMHCDDIEIEEDIL 343 (397)
T ss_dssp ECBC---------------CCBSBSSCEEEEEECSSSSEEEE-EETTS--EEEEEETTTTEEEEEEECCGGGCSSGGGCC
T ss_pred eccCc-------ccccccccccccCCcEEEEEECCCCCEEEE-EeCCC--eEEEEEcCCCceeEEEecccCcccchhhhh
Confidence 11100 000000000 01123457789999996654 33333 56667888877655443 2
Q ss_pred ----------CCCeeeEEEeecCC
Q 003363 487 ----------ESNFSWSLLTLDGD 500 (826)
Q Consensus 487 ----------~~~~~~~~~s~dg~ 500 (826)
...+....|+++++
T Consensus 344 ~g~~~~~~~~~~~v~~~~~~~~g~ 367 (397)
T 1sq9_A 344 AVDEHGDSLAEPGVFDVKFLKKGW 367 (397)
T ss_dssp CBCTTSCBCSSCCEEEEEEECTTT
T ss_pred ccccccccccCCceeEEEeccccc
Confidence 34456668888873
No 334
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.11 E-value=8.9e-09 Score=107.88 Aligned_cols=245 Identities=11% Similarity=0.107 Sum_probs=140.7
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCC-ccceeecCCcceecccEEEEeCCC--CCeEEEEecCCCCCCe
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENEN-SVTFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPENESPI 180 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~-~~~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~~~~~~ 180 (826)
++|||++++-.. ....+.++++.....+ ...|.... ..+...+|+|+ |+.||..+.++
T Consensus 17 ~s~~g~~las~s---------~D~~v~iw~~~~~~~~~~~~l~gH~-----~~V~~v~~s~~~~g~~l~s~s~D~----- 77 (297)
T 2pm7_B 17 MDYYGKRMATCS---------SDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAHPKFGTILASCSYDG----- 77 (297)
T ss_dssp ECTTSSEEEEEE---------TTSCEEEEEBCSSCBCCCEEECCCS-----SCEEEEEECCGGGCSEEEEEETTT-----
T ss_pred ECCCCCEEEEEe---------CCCEEEEEecCCCCcEEEEEEcccc-----CCeEEEEecCCCcCCEEEEEcCCC-----
Confidence 479999876432 2345666666433222 22333332 45889999974 88888776543
Q ss_pred EEEEec--CCceeEEEecCCCccccccCCCcccceeecCC--CCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCc
Q 003363 181 QFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ 256 (826)
Q Consensus 181 ~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPD--g~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (826)
.+.+|+ .++...+.... ...+.| ..++|+|| |+.|+..+.+
T Consensus 78 ~v~iWd~~~~~~~~~~~~~-~h~~~v------~~v~~~p~~~g~~l~s~s~d---------------------------- 122 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHA-VHSASV------NSVQWAPHEYGPMLLVASSD---------------------------- 122 (297)
T ss_dssp EEEEEEBSSSCBCCCEEEC-CCSSCE------EEEEECCGGGCSEEEEEETT----------------------------
T ss_pred EEEEEEcCCCceEEEEEee-cCCCce------eEEEeCcCCCCcEEEEEECC----------------------------
Confidence 567773 23222221111 112222 78999998 8888776433
Q ss_pred ceeecCCCccCCCccCceEEEEEccCCc---eEeccCCCCCCccceEEEeeCC-------------CCCccEEEEEeecC
Q 003363 257 GDWEEDWGETYAGKRQPSLFVININSGE---VQAVKGIPKSLSVGQVVWAPLN-------------EGLHQYLVFVGWSS 320 (826)
Q Consensus 257 ~~~~~d~g~~~~~~~~~~l~v~d~~~g~---~~~l~~~~~~~~~~~~~wSPDg-------------~~~~~~lvf~~~~~ 320 (826)
..|.+||+.++. ...+ ......+..++|+|++ +. |+..+
T Consensus 123 ----------------~~v~~wd~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~----l~sgs--- 177 (297)
T 2pm7_B 123 ----------------GKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVTGG--- 177 (297)
T ss_dssp ----------------SEEEEEEBCSSSCBCCEEE--ECCSSCEEEEEECCCC------------CCE----EEEEE---
T ss_pred ----------------CcEEEEEecCCCceeeeee--ecccCccceEeecCCcccccccCCCCCCcce----EEEEc---
Confidence 568888887653 2223 2334467788999984 33 54444
Q ss_pred cceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCC----cceecCCCCccccCceecCCC---CEEEEEeccC
Q 003363 321 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL----PVVNLTESISSAFFPRFSPDG---KFLVFLSAKS 393 (826)
Q Consensus 321 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~----~~~~Lt~~~~~~~~p~~SpDG---~~l~f~s~~~ 393 (826)
.+..|.++|+. ... ....+..+...+...+||||| ++|+..+.+
T Consensus 178 ------------~D~~v~lwd~~----------------~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D- 228 (297)
T 2pm7_B 178 ------------ADNLVKIWKYN----------------SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD- 228 (297)
T ss_dssp ------------TTSCEEEEEEE----------------TTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT-
T ss_pred ------------CCCcEEEEEEc----------------CCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECC-
Confidence 23357777762 111 234566677788999999996 666655544
Q ss_pred CCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003363 394 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (826)
Q Consensus 394 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~v 473 (826)
..|.+||+.++..... ..+... .. +...+..++|+|||+.| ++...++...||..
T Consensus 229 ----------~~v~iWd~~~~~~~~~-------~~~~~~---~~----~~~~v~~~~~s~~g~~l-as~~~D~~v~lw~~ 283 (297)
T 2pm7_B 229 ----------RTCIIWTQDNEQGPWK-------KTLLKE---EK----FPDVLWRASWSLSGNVL-ALSGGDNKVTLWKE 283 (297)
T ss_dssp ----------SCEEEEEESSTTSCCE-------EEESSS---SC----CSSCEEEEEECSSSCCE-EEEETTSCEEEEEE
T ss_pred ----------CcEEEEEeCCCCCccc-------eeeeec---cc----CCCcEEEEEECCCCCEE-EEEcCCCcEEEEEE
Confidence 3477888765321100 000000 00 11234467899999865 45556777888877
Q ss_pred ECCCCcEEE
Q 003363 474 NVSSGELLR 482 (826)
Q Consensus 474 dl~tg~~~~ 482 (826)
+.. |+...
T Consensus 284 ~~~-g~w~~ 291 (297)
T 2pm7_B 284 NLE-GKWEP 291 (297)
T ss_dssp CTT-SCEEE
T ss_pred CCC-CcEEe
Confidence 653 44443
No 335
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.11 E-value=3.1e-09 Score=113.32 Aligned_cols=247 Identities=10% Similarity=0.046 Sum_probs=144.4
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCc----eeEEEecCCCccccccCCCcccceeecCCCC-eEEEEe
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQ----LEKEFHVPQTVHGSVYADGWFEGISWNSDET-LIAYVA 226 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~----~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~-~ia~~~ 226 (826)
..+...+|||||+.|+.....+ .+.+| ..+. ........ +.| ..+.|+|||+ .|+..+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~-----~v~iw~~~~~~~~~~~~~~~~~~----~~v------~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDG-----SLTVYKFDIQAKNVDLLQSLRYK----HPL------LCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTS-----EEEEEEEETTTTEEEEEEEEECS----SCE------EEEEEEESSSEEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCC-----eEEEEEeCCCCccccceeeeecC----Cce------EEEEECCCCCcEEEEEc
Confidence 3588999999999998876543 34455 2333 22222222 222 7999999999 888764
Q ss_pred ecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEc-cCCceEeccCCCCCCccceEEEeeC
Q 003363 227 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI-NSGEVQAVKGIPKSLSVGQVVWAPL 305 (826)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~-~~g~~~~l~~~~~~~~~~~~~wSPD 305 (826)
.+ ..|++||+ .+++...+.+......+..+.|+|
T Consensus 77 ~d--------------------------------------------g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~- 111 (342)
T 1yfq_A 77 VQ--------------------------------------------GEILKVDLIGSPSFQALTNNEANLGICRICKYG- 111 (342)
T ss_dssp TT--------------------------------------------SCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-
T ss_pred CC--------------------------------------------CeEEEEEeccCCceEeccccCCCCceEEEEeCC-
Confidence 32 56999999 999887773211555778999999
Q ss_pred CCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCE
Q 003363 306 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKF 385 (826)
Q Consensus 306 g~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~ 385 (826)
++. |+..+ .+..|+.+|+....... ....++..........+....|+|++
T Consensus 112 ~~~----l~s~~---------------~d~~i~iwd~~~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~-- 162 (342)
T 1yfq_A 112 DDK----LIAAS---------------WDGLIEVIDPRNYGDGV--------IAVKNLNSNNTKVKNKIFTMDTNSSR-- 162 (342)
T ss_dssp TTE----EEEEE---------------TTSEEEEECHHHHTTBC--------EEEEESCSSSSSSCCCEEEEEECSSE--
T ss_pred CCE----EEEEc---------------CCCeEEEEccccccccc--------ccccCCeeeEEeeCCceEEEEecCCc--
Confidence 776 66555 23478888872100000 00002222222255667888999998
Q ss_pred EEEEeccCCCCCCCCcccceEEEEeCCC-CCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCcccc-CCCEEEEEEE
Q 003363 386 LVFLSAKSSVDSGAHSATDSLHRIDWPT-NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS-DGCTMLLSSI 463 (826)
Q Consensus 386 l~f~s~~~~~~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~-Dg~~l~~~~~ 463 (826)
|+..+.+ ..|++||+.+ +........ .. ....+..+.|+| |++.++ +..
T Consensus 163 l~~~~~d-----------~~i~i~d~~~~~~~~~~~~~---------~~--------~~~~i~~i~~~~~~~~~l~-~~~ 213 (342)
T 1yfq_A 163 LIVGMNN-----------SQVQWFRLPLCEDDNGTIEE---------SG--------LKYQIRDVALLPKEQEGYA-CSS 213 (342)
T ss_dssp EEEEEST-----------TEEEEEESSCCTTCCCEEEE---------CS--------CSSCEEEEEECSGGGCEEE-EEE
T ss_pred EEEEeCC-----------CeEEEEECCccccccceeee---------cC--------CCCceeEEEECCCCCCEEE-EEe
Confidence 5444332 4699999877 432110000 00 011234678999 998654 445
Q ss_pred eCCeEEEEEEECC-----CCcEEEecCCCC---------CeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 464 WGSSQVIISVNVS-----SGELLRITPAES---------NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 464 ~~~~~~l~~vdl~-----tg~~~~lt~~~~---------~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
.++...+|.++.. ......+..... .+....|+++++.++....+ . .|.+.++..
T Consensus 214 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g---~i~vwd~~~ 282 (342)
T 1yfq_A 214 IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD-G---IISCWNLQT 282 (342)
T ss_dssp TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT-S---CEEEEETTT
T ss_pred cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCC-c---eEEEEcCcc
Confidence 5666677766654 133344433322 45556788888866544432 2 367777643
No 336
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.11 E-value=4.1e-11 Score=135.97 Aligned_cols=129 Identities=25% Similarity=0.289 Sum_probs=92.5
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCcc-chHHHHHHHHCCcEEEEECCC-CCCCCchhhhhcCCCCCCcchHH
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YSKSLAFLSSVGYSLLIVNYR-GSLGFGEEALQSLPGKVGSQDVN 653 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~-~~~~~~~la~~G~~Vl~~d~r-G~~g~G~~~~~~~~~~~~~~~~~ 653 (826)
+...+|.|.+....++.|+||++|||++...... +.. ..+..+.|++|+.+||| |..|++....... .+...+.
T Consensus 99 l~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~-~~la~~~g~vvv~~nYRlg~~gf~~~~~~~~---~~n~gl~ 174 (542)
T 2h7c_A 99 LYLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDG-LALAAHENVVVVTIQYRLGIWGFFSTGDEHS---RGNWGHL 174 (542)
T ss_dssp CEEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCC-HHHHHHHTCEEEEECCCCHHHHHCCCSSTTC---CCCHHHH
T ss_pred cEEEEEECCCCCCCCCCCEEEEECCCcccCCCccccCH-HHHHhcCCEEEEecCCCCccccCCCCCcccC---ccchhHH
Confidence 4446888976544578999999999887654432 322 22334589999999999 4333332221112 2334578
Q ss_pred HHHHHHHHHHHc---CCCCCCcEEEEEecchHHHHHHHHHh--CCCceeEEEecCCccch
Q 003363 654 DVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLCNL 708 (826)
Q Consensus 654 D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~p~~~~ 708 (826)
|+.++++|+.++ ...|+++|.|+|+|+||+++..++.. .+.+|+++|+.+|....
T Consensus 175 D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~~ 234 (542)
T 2h7c_A 175 DQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALT 234 (542)
T ss_dssp HHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTC
T ss_pred HHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCccC
Confidence 999999999885 34799999999999999999988875 35799999999987643
No 337
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=99.11 E-value=2e-11 Score=138.37 Aligned_cols=221 Identities=15% Similarity=0.097 Sum_probs=125.5
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCcc-ch--HHHH-HHH-HCCcEEEEECCCCCCCCch----hhhhcCCCC
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS--KSLA-FLS-SVGYSLLIVNYRGSLGFGE----EALQSLPGK 646 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~-~~--~~~~-~la-~~G~~Vl~~d~rG~~g~G~----~~~~~~~~~ 646 (826)
+...+|.|.+....++.|+||++|||++...... +. ..+. .++ ..|++|+.+|||... +|- ......
T Consensus 106 l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~-~gf~~~~~~~~~~--- 181 (544)
T 1thg_A 106 LYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGP-FGFLGGDAITAEG--- 181 (544)
T ss_dssp CEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHH-HHHCCSHHHHHHT---
T ss_pred eEEEEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCc-ccCCCcccccccC---
Confidence 4456788875444578999999999987654432 21 1222 222 358999999999743 111 100111
Q ss_pred CCcchHHHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHhC--------CCceeEEEecCCccchhhhccCC
Q 003363 647 VGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--------PDKFVAAAARNPLCNLALMVGTT 715 (826)
Q Consensus 647 ~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~~--------p~~~~a~v~~~p~~~~~~~~~~~ 715 (826)
.+...+.|+.++++|+.++. ..|++||.|+|+|+||.+++.++... ..+|+++|+.+|...........
T Consensus 182 ~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~~~~~~~ 261 (544)
T 1thg_A 182 NTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPLPYHDSSSV 261 (544)
T ss_dssp CTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCCCCCSSSCCS
T ss_pred CCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEecccccccCcCChH
Confidence 23345899999999998862 47999999999999999998777652 45899999999853211111100
Q ss_pred CCC-Cc-hhhhhccCcCCccCCCCCChhhHHHHhhcCcccccCC-----------CCCcEEEEEeCCCCCCCcHHHHHHH
Q 003363 716 DIP-DW-CYVESYGSKGKDSFTESPSVEDLTRFHSKSPISHISK-----------VKTPTIFLLGAQDLRVPVSNGLQYA 782 (826)
Q Consensus 716 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~-----------i~~PvLii~G~~D~~vp~~~~~~~~ 782 (826)
... .+ .+....+... .....+..+.++..++...+.. .....+.+....|..+.+.+..++.
T Consensus 262 ~~~~~~~~~~~~~gc~~-----~~~~~~~~~cLr~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~P~~Dg~~l~~~p~~~~ 336 (544)
T 1thg_A 262 GPDISYNRFAQYAGCDT-----SASANDTLECLRSKSSSVLHDAQNSYDLKDLFGLLPQFLGFGPRPDGNIIPDAAYELF 336 (544)
T ss_dssp SSSCHHHHHHHHHTCCT-----TSCHHHHHHHHHHSCHHHHHHHHHHHHHHHSTTTSCGGGTSCCCCCSSSSCSCHHHHH
T ss_pred HHHHHHHHHHHHhCCCC-----CCCcHHHHHHHhcCCHHHHHHhhhhcccccccccccccccceeeeCCcccCcCHHHHH
Confidence 000 11 1112222210 0000022233333322111100 0000011233445556666667776
Q ss_pred HHHHhCCCCEEEEEeCCCCCCCC
Q 003363 783 RALREKGVETKVIVFPNDVHGIE 805 (826)
Q Consensus 783 ~~l~~~g~~~~~~~~p~~~H~~~ 805 (826)
+..+..++++.+-...++||.+.
T Consensus 337 ~~g~~~~vp~l~G~~~~Eg~~f~ 359 (544)
T 1thg_A 337 RSGRYAKVPYISGNQEDEGTAFA 359 (544)
T ss_dssp HTTCSCCCCEEEEEETBTTTTTG
T ss_pred hcCCCCCccEEEEeecCchhhhc
Confidence 66666678888888888898764
No 338
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.11 E-value=1.7e-09 Score=125.52 Aligned_cols=240 Identities=10% Similarity=0.046 Sum_probs=147.4
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCC----ceeEEEecCCCcccc-ccCCCcccceeecC--CCCeEEE
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW--SQS----QLEKEFHVPQTVHGS-VYADGWFEGISWNS--DETLIAY 224 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~----~~~~~~~~~~~~~g~-v~~~~~~~~~~wSP--Dg~~ia~ 224 (826)
..+...+|||||++||+..+. .+.+| ..+ +..+.+. +..+. | ..++||| ||+.||.
T Consensus 19 ~~v~~~~~spdg~~l~~~~~~------~v~v~~~~~~~~~~~~~~~~~---~h~~~~v------~~~~~sp~~~~~~l~s 83 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCGK------SAFVRCLDDGDSKVPPVVQFT---GHGSSVV------TTVKFSPIKGSQYLCS 83 (615)
T ss_dssp TCCCCCEEETTTTEEEEEETT------EEEEEECCSSCCSSCSEEEEC---TTTTSCE------EEEEECSSTTCCEEEE
T ss_pred CceeEEEECCCCCEEEEecCC------eEEEEECCCCCCccccceEEe---cCCCceE------EEEEECcCCCCCEEEE
Confidence 458889999999999998632 35566 233 2333322 22222 3 7899999 9999988
Q ss_pred EeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCC------ceEeccC-CCCCCcc
Q 003363 225 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG------EVQAVKG-IPKSLSV 297 (826)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g------~~~~l~~-~~~~~~~ 297 (826)
.+.+ ..|.+||+.++ +.+.+.. ......+
T Consensus 84 ~~~d--------------------------------------------g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v 119 (615)
T 1pgu_A 84 GDES--------------------------------------------GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPI 119 (615)
T ss_dssp EETT--------------------------------------------SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCE
T ss_pred ecCC--------------------------------------------CEEEEEeCCCCcccccccccccchhhcccccE
Confidence 6442 56889998655 2222210 2234467
Q ss_pred ceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCc
Q 003363 298 GQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFP 377 (826)
Q Consensus 298 ~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p 377 (826)
..++|+|||+. |+..+...+ ....|+.+|. +.....+..+...+...
T Consensus 120 ~~~~~s~~~~~----l~~~~~~~~-----------~~~~v~~~d~------------------~~~~~~~~~~~~~v~~~ 166 (615)
T 1pgu_A 120 SDISWDFEGRR----LCVVGEGRD-----------NFGVFISWDS------------------GNSLGEVSGHSQRINAC 166 (615)
T ss_dssp EEEEECTTSSE----EEEEECCSS-----------CSEEEEETTT------------------CCEEEECCSCSSCEEEE
T ss_pred EEEEEeCCCCE----EEEeccCCC-----------CccEEEEEEC------------------CCcceeeecCCccEEEE
Confidence 88999999998 887763221 1235666663 33456667777788899
Q ss_pred eecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccC---CCCCCccccC
Q 003363 378 RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSS---SILSNPWLSD 454 (826)
Q Consensus 378 ~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~---~~~~~~ws~D 454 (826)
.|+|||+.+++....+ ..|.+||+.+++.... +.. +.. .+..+.|+||
T Consensus 167 ~~~~~~~~~l~~~~~d----------~~v~vwd~~~~~~~~~----------~~~---------~~~~~~~v~~~~~~~~ 217 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDD----------GSVVFYQGPPFKFSAS----------DRT---------HHKQGSFVRDVEFSPD 217 (615)
T ss_dssp EECSSSSCEEEEEETT----------TEEEEEETTTBEEEEE----------ECS---------SSCTTCCEEEEEECST
T ss_pred EECCCCCcEEEEEeCC----------CcEEEEeCCCcceeee----------ecc---------cCCCCceEEEEEECCC
Confidence 9999999544444332 4688999776443111 100 011 2346789999
Q ss_pred -CCEEEEEEEeCCeEEEEEEECCCCcEEEec-----CCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 455 -GCTMLLSSIWGSSQVIISVNVSSGELLRIT-----PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 455 -g~~l~~~~~~~~~~~l~~vdl~tg~~~~lt-----~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
|+.|+.. ..++ .|..+|+.+++..... .....+....|+ +++.++....+ ..+.+.++..
T Consensus 218 ~~~~l~~~-~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d----~~i~~wd~~~ 283 (615)
T 1pgu_A 218 SGEFVITV-GSDR--KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD----ATIRVWDVTT 283 (615)
T ss_dssp TCCEEEEE-ETTC--CEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT----SEEEEEETTT
T ss_pred CCCEEEEE-eCCC--eEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCC----CcEEEEECCC
Confidence 8866544 3333 5666788888766554 333445556777 77766655433 3366666543
No 339
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.11 E-value=4.2e-09 Score=113.88 Aligned_cols=243 Identities=12% Similarity=0.107 Sum_probs=142.1
Q ss_pred cCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCcceecccEEEEeCCC--CCeEEEEecCCCCCC
Q 003363 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPENESP 179 (826)
Q Consensus 103 ~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~-~~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~~~~~ 179 (826)
.++|||+.++... ....+.++++....... ..+.... ..+...+|+|+ |++|+.....+
T Consensus 18 ~~s~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~~l~s~~~dg---- 79 (379)
T 3jrp_A 18 VLDYYGKRLATCS---------SDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAHPKFGTILASCSYDG---- 79 (379)
T ss_dssp EECSSSSEEEEEE---------TTSCEEEEEEETTEEEEEEEECCCS-----SCEEEEEECCGGGCSEEEEEETTS----
T ss_pred EEcCCCCEEEEEE---------CCCcEEEEecCCCcceeeeEecCCC-----CcEEEEEeCCCCCCCEEEEeccCC----
Confidence 3489999887542 12345555554322221 2232222 45889999988 89888776543
Q ss_pred eEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCC--CCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCC
Q 003363 180 IQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 255 (826)
Q Consensus 180 ~~~~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPD--g~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (826)
.+.+| ..++...+.... ...+.| ..+.|+|+ ++.|+..+.+
T Consensus 80 -~v~iwd~~~~~~~~~~~~~-~~~~~v------~~~~~~~~~~~~~l~~~~~d--------------------------- 124 (379)
T 3jrp_A 80 -KVLIWKEENGRWSQIAVHA-VHSASV------NSVQWAPHEYGPLLLVASSD--------------------------- 124 (379)
T ss_dssp -CEEEEEEETTEEEEEEEEC-CCSSCE------EEEEECCGGGCSEEEEEETT---------------------------
T ss_pred -EEEEEEcCCCceeEeeeec-CCCcce------EEEEeCCCCCCCEEEEecCC---------------------------
Confidence 34555 233322222221 222223 79999999 8888886443
Q ss_pred cceeecCCCccCCCccCceEEEEEccCCce---EeccCCCCCCccceEEEee-------------CCCCCccEEEEEeec
Q 003363 256 QGDWEEDWGETYAGKRQPSLFVININSGEV---QAVKGIPKSLSVGQVVWAP-------------LNEGLHQYLVFVGWS 319 (826)
Q Consensus 256 ~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~---~~l~~~~~~~~~~~~~wSP-------------Dg~~~~~~lvf~~~~ 319 (826)
..|.+||+.++.. ..+ ......+..++|+| |++. |+..+
T Consensus 125 -----------------~~i~v~d~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~-- 179 (379)
T 3jrp_A 125 -----------------GKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVTGG-- 179 (379)
T ss_dssp -----------------SEEEEEECCTTSCCCEEEE--ECCTTCEEEEEECCCC----------CTTCE----EEEEE--
T ss_pred -----------------CcEEEEecCCCCceeeEEe--cCCCCceEEEEEcCccccccccccCCCCCCE----EEEEe--
Confidence 5788999887632 223 23344677899999 5776 66555
Q ss_pred CcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCC-CcceecCCCCccccCceecCC---CCEEEEEeccCCC
Q 003363 320 SETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVNLTESISSAFFPRFSPD---GKFLVFLSAKSSV 395 (826)
Q Consensus 320 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~Lt~~~~~~~~p~~SpD---G~~l~f~s~~~~~ 395 (826)
.+..|+++|+.... .. .....+..+...+..+.|+|| |++|+..+.+
T Consensus 180 -------------~dg~i~i~d~~~~~-------------~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d--- 230 (379)
T 3jrp_A 180 -------------ADNLVKIWKYNSDA-------------QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD--- 230 (379)
T ss_dssp -------------TTSCEEEEEEETTT-------------TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT---
T ss_pred -------------CCCeEEEEEecCCC-------------cceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC---
Confidence 23367788872100 00 112355566777889999999 7877766644
Q ss_pred CCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEEC
Q 003363 396 DSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 475 (826)
Q Consensus 396 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl 475 (826)
..|.+||+.++..... ..+... .. +...+..+.|+|||+.|+. ...++...+|.++.
T Consensus 231 --------g~i~iwd~~~~~~~~~-------~~~~~~---~~----~~~~v~~~~~s~~g~~l~~-~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 231 --------RTCIIWTQDNEQGPWK-------KTLLKE---EK----FPDVLWRASWSLSGNVLAL-SGGDNKVTLWKENL 287 (379)
T ss_dssp --------SCEEEEEESSTTSCCE-------EEESSS---SC----CSSCEEEEEECSSSCCEEE-EESSSSEEEEEEEE
T ss_pred --------CEEEEEeCCCCCccce-------eeeecc---cc----CCCcEEEEEEcCCCCEEEE-ecCCCcEEEEeCCC
Confidence 3488888877542110 000000 00 1113446789999996654 44567777887764
No 340
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.11 E-value=7.6e-08 Score=105.07 Aligned_cols=259 Identities=13% Similarity=0.078 Sum_probs=143.4
Q ss_pred cccEEEEeCC-CCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCC---eEEEEee
Q 003363 154 TGASAVVPSP-SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDET---LIAYVAE 227 (826)
Q Consensus 154 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~---~ia~~~~ 227 (826)
..+...+|+| +++.|+.....+ .+.+| ..++........... ..+.|+|++. .|+....
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 164 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDK-----TLKVWDTNTLQTADVFNFEETV----------YSHHMSPVSTKHCLVAVGTR 164 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTS-----EEEEEETTTTEEEEEEECSSCE----------EEEEECSSCSSCCEEEEEES
T ss_pred CcEEEEEEccCCCcEEEEEeCCC-----eEEEeeCCCCccceeccCCCce----------eeeEeecCCCCCcEEEEEcC
Confidence 4688999999 667777665433 56677 344444444433333 6778888544 6665432
Q ss_pred cCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC
Q 003363 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 307 (826)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~ 307 (826)
...|.+||+.+++..... ......+..++|+|+++
T Consensus 165 --------------------------------------------~~~v~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 165 --------------------------------------------GPKVQLCDLKSGSCSHIL-QGHRQEILAVSWSPRYD 199 (408)
T ss_dssp --------------------------------------------SSSEEEEESSSSCCCEEE-CCCCSCEEEEEECSSCT
T ss_pred --------------------------------------------CCeEEEEeCCCcceeeee-cCCCCcEEEEEECCCCC
Confidence 257999999887644331 33445678899999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEE
Q 003363 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 387 (826)
Q Consensus 308 ~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~ 387 (826)
. +++++. .+..|+.+|+......-........+........+..+...+....|+|||++|+
T Consensus 200 ~----ll~~~~--------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 261 (408)
T 4a11_B 200 Y----ILATAS--------------ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLL 261 (408)
T ss_dssp T----EEEEEE--------------TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEE
T ss_pred c----EEEEEc--------------CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEE
Confidence 8 777663 2336778887311000000000000000001112234556678899999999988
Q ss_pred EEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccc-cCCCEEEEEEEeCC
Q 003363 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGS 466 (826)
Q Consensus 388 f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws-~Dg~~l~~~~~~~~ 466 (826)
..+.+ ..|.+||+.++........... . ... ......+. ..+..+++. ..++
T Consensus 262 ~~~~d-----------g~i~vwd~~~~~~~~~~~~~~~--~-------~~~------~~~~~~~~~~~~~~~~~~-~~~~ 314 (408)
T 4a11_B 262 TVGTD-----------NRMRLWNSSNGENTLVNYGKVC--N-------NSK------KGLKFTVSCGCSSEFVFV-PYGS 314 (408)
T ss_dssp EEETT-----------SCEEEEETTTCCBCCCCCCCCC--C-------CCS------SCCCCEECCSSSSCEEEE-EETT
T ss_pred EecCC-----------CeEEEEECCCCccceecccccc--c-------ccc------ccceeEEecCCCceEEEE-ecCC
Confidence 77654 3589999988665322211100 0 000 00111222 223334444 3333
Q ss_pred eEEEEEEECCCCcEEEecC-CCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 467 SQVIISVNVSSGELLRITP-AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 467 ~~~l~~vdl~tg~~~~lt~-~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
.+..+|+.+++...... ....+....|++++..|+....+ . .|.+.++...
T Consensus 315 --~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-g---~i~iw~~~~~ 366 (408)
T 4a11_B 315 --TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRD-C---NILAWVPSLY 366 (408)
T ss_dssp --EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETT-S---CEEEEEECC-
T ss_pred --EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCC-C---eEEEEeCCCC
Confidence 56777888887665544 33456667899998876644432 2 3666665543
No 341
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.11 E-value=6.9e-09 Score=108.91 Aligned_cols=273 Identities=14% Similarity=0.088 Sum_probs=157.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+| |||++|+.....+ .+.+|+ .+......... .+. +..+.|+||++.|+..+.+...
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg-----~v~vw~~~~~~~~~~~~~~---~~~------v~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDG-----TVRLWSKDDQWLGTVVYTG---QGF------LNSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTS-----EEEEEEESSSEEEEEEEEC---SSC------EEEEEEETTTTEEEEEETTSCE
T ss_pred CCcEEEEe-cCCCEEEEEEcCC-----cEEEEECCCCEEEEEeecC---Ccc------EEEEEECCCCCEEEEecCCCeE
Confidence 45788899 9999998876543 566663 33333333221 222 2799999999999998876643
Q ss_pred CCCCcc-CCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEee-CCCCC
Q 003363 232 SKPTFS-LGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP-LNEGL 309 (826)
Q Consensus 232 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSP-Dg~~~ 309 (826)
..+... ............+........|. ....+++.....|.+|| .......+ ......+..+.|+| +++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~~~d-~~~~~~~~--~~~~~~v~~~~~~~~~~~~- 157 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGVVISGSWDKTAKVWK-EGSLVYNL--QAHNASVWDAKVVSFSENK- 157 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEE-TTEEEEEE--ECCSSCEEEEEEEETTTTE-
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEec--CCEEEEEeCCCCEEEEc-CCcEEEec--ccCCCceeEEEEccCCCCE-
Confidence 211111 11111111222333333344453 23445555678899999 33334444 33445677889999 7776
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCC-CCccccCceecCCCCEEEE
Q 003363 310 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVF 388 (826)
Q Consensus 310 ~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~l~f 388 (826)
|+..+ .+..|+.+|. . .....+.. +...+....|+|+|+ |+.
T Consensus 158 ---l~~~~---------------~d~~i~i~d~-----------------~-~~~~~~~~~~~~~i~~~~~~~~~~-~~~ 200 (313)
T 3odt_A 158 ---FLTAS---------------ADKTIKLWQN-----------------D-KVIKTFSGIHNDVVRHLAVVDDGH-FIS 200 (313)
T ss_dssp ---EEEEE---------------TTSCEEEEET-----------------T-EEEEEECSSCSSCEEEEEEEETTE-EEE
T ss_pred ---EEEEE---------------CCCCEEEEec-----------------C-ceEEEEeccCcccEEEEEEcCCCe-EEE
Confidence 66554 2346778874 2 23334443 566688899999998 554
Q ss_pred EeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeE
Q 003363 389 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 468 (826)
Q Consensus 389 ~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~ 468 (826)
.+.+ ..|++||+.+++....... ....+..+.|+|||+ |+ +...+ .
T Consensus 201 ~~~d-----------g~i~i~d~~~~~~~~~~~~-------------------~~~~i~~~~~~~~~~-l~-~~~~d--g 246 (313)
T 3odt_A 201 CSND-----------GLIKLVDMHTGDVLRTYEG-------------------HESFVYCIKLLPNGD-IV-SCGED--R 246 (313)
T ss_dssp EETT-----------SEEEEEETTTCCEEEEEEC-------------------CSSCEEEEEECTTSC-EE-EEETT--S
T ss_pred ccCC-----------CeEEEEECCchhhhhhhhc-------------------CCceEEEEEEecCCC-EE-EEecC--C
Confidence 4433 4699999887553211100 111344678999994 43 33333 4
Q ss_pred EEEEEECCCCcEEEec-CCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 469 VIISVNVSSGELLRIT-PAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 469 ~l~~vdl~tg~~~~lt-~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
.|..+|+.+++..... .....+....|++++. ++. .+... .|.+.++...
T Consensus 247 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~-~~~dg---~i~iw~~~~~ 297 (313)
T 3odt_A 247 TVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIV-GSSDN---LVRIFSQEKS 297 (313)
T ss_dssp EEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEE-EETTS---CEEEEESCGG
T ss_pred EEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEE-EeCCC---cEEEEeCCCC
Confidence 5666788888765544 3333566667888887 333 33322 3667676543
No 342
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.11 E-value=2.5e-09 Score=118.97 Aligned_cols=156 Identities=10% Similarity=0.082 Sum_probs=96.6
Q ss_pred ccceeecCCCCeEEEEeecCCCCCCCccCCC-CCC-------CCCCccCCCCCCcceeecCC-CccCCCccCceEEEEEc
Q 003363 210 FEGISWNSDETLIAYVAEEPSPSKPTFSLGS-TKG-------GSSDKDCNSWKGQGDWEEDW-GETYAGKRQPSLFVINI 280 (826)
Q Consensus 210 ~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~d~-g~~~~~~~~~~l~v~d~ 280 (826)
+..++|+|||+.|+.. .+.... .|+... ... ......+........|.++. ...+++.....|.+||+
T Consensus 180 v~~~~~~~~~~~l~s~-~d~~i~--iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 180 INSISINSDYETYLSA-DDLRIN--LWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp CCEEEECTTSSEEEEE-CSSEEE--EEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred eEEEEEcCCCCEEEEe-CCCeEE--EEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 3799999999999876 444322 333210 000 01233455556677888885 34455666789999999
Q ss_pred cCCce-----EeccCCCCCC------------ccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcc
Q 003363 281 NSGEV-----QAVKGIPKSL------------SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVS 343 (826)
Q Consensus 281 ~~g~~-----~~l~~~~~~~------------~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~ 343 (826)
.+++. ..+. .... .+..++|+|||+. |+..+ . ..|.++|+.
T Consensus 257 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~g~~----l~~~~---------------~-~~v~iwd~~ 314 (447)
T 3dw8_B 257 RASALCDRHSKLFE--EPEDPSNRSFFSEIISSISDVKFSHSGRY----MMTRD---------------Y-LSVKVWDLN 314 (447)
T ss_dssp TTCSSSCTTCEEEC--CC-----CCHHHHHTTCEEEEEECTTSSE----EEEEE---------------S-SEEEEEETT
T ss_pred cCCccccceeeEec--cCCCccccccccccCceEEEEEECCCCCE----EEEee---------------C-CeEEEEeCC
Confidence 98874 4442 2221 6778999999997 77554 2 378888872
Q ss_pred cccchhhhhhhhcCCCCCCcceecCCCCcc---------------ccCceecCCCCEEEEEeccCCCCCCCCcccceEEE
Q 003363 344 LYKSEASELELKESSSEDLPVVNLTESISS---------------AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHR 408 (826)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~---------------~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~ 408 (826)
. .......+..+... .....|||||++|+..+.+ ..|++
T Consensus 315 ~---------------~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~d-----------g~v~i 368 (447)
T 3dw8_B 315 M---------------ENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYN-----------NFFRM 368 (447)
T ss_dssp C---------------CSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECST-----------TEEEE
T ss_pred C---------------CccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccC-----------CEEEE
Confidence 1 12223333333211 2237999999998655543 46999
Q ss_pred EeCCCCCC
Q 003363 409 IDWPTNGN 416 (826)
Q Consensus 409 ~d~~~~~~ 416 (826)
||+.+++.
T Consensus 369 wd~~~~~~ 376 (447)
T 3dw8_B 369 FDRNTKRD 376 (447)
T ss_dssp EETTTCCE
T ss_pred EEcCCCcc
Confidence 99988664
No 343
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.10 E-value=6.8e-10 Score=121.02 Aligned_cols=279 Identities=9% Similarity=-0.009 Sum_probs=149.5
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (826)
++|||+.++-. ..+..+.+|++.+. .....+.... ..+...+|||||++||..... +...+|.
T Consensus 74 ~sp~~~~l~s~---------s~D~~v~iWd~~~~-~~~~~~~~h~-----~~v~~~~~s~~g~~las~~~d--~~v~iw~ 136 (380)
T 3iz6_a 74 WTPEKNWIVSA---------SQDGRLIVWNALTS-QKTHAIKLHC-----PWVMECAFAPNGQSVACGGLD--SACSIFN 136 (380)
T ss_dssp ECTTSSCEEEE---------ETTSEEEEEETTTT-EEEEEEECCC-----TTCCCCEECTTSSEEEECCSS--SCCEEEE
T ss_pred EcCCCCEEEEE---------eCCCeEEEEECCCC-ccceEEecCC-----CCEEEEEECCCCCEEEEeeCC--CcEEEEE
Confidence 47777766432 23456777765322 2222232222 347788999999999875432 3333444
Q ss_pred EecCCce---eEEEecCCCccccccCCCcccceeecCCCC-eEEEEeecCCCCCCCccCCCCCCCC-----CCccCCCCC
Q 003363 184 LWSQSQL---EKEFHVPQTVHGSVYADGWFEGISWNSDET-LIAYVAEEPSPSKPTFSLGSTKGGS-----SDKDCNSWK 254 (826)
Q Consensus 184 i~~~~~~---~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~-~ia~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 254 (826)
+...... ..+...-.+..+.+ ..+.|+|++. .|+..+.+.... .|+........ ....+....
T Consensus 137 ~~~~~~~~~~~~~~~~~~gh~~~v------~~~~~~~~~~~~l~s~s~D~~i~--~wd~~~~~~~~~~~~~~~~~h~~~v 208 (380)
T 3iz6_a 137 LSSQADRDGNMPVSRVLTGHKGYA------SSCQYVPDQETRLITGSGDQTCV--LWDVTTGQRISIFGSEFPSGHTADV 208 (380)
T ss_dssp CCCCSSCCCSSTTCCBCCCCSSCC------CCCBCCSSSSSCEEEECTTSCEE--EECTTTCCEEEEECCCSSSSCCSCE
T ss_pred CCCCccccCCccceeeccCCCcce------EEEEEecCCCCEEEEECCCCcEE--EEEcCCCcEEEEeecccCCCCccCe
Confidence 3311100 00111112222333 6788999854 577666665443 33322111110 011223333
Q ss_pred Ccceeec-CCCccCCCccCceEEEEEcc-CCc-eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeec
Q 003363 255 GQGDWEE-DWGETYAGKRQPSLFVININ-SGE-VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCY 331 (826)
Q Consensus 255 ~~~~~~~-d~g~~~~~~~~~~l~v~d~~-~g~-~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~ 331 (826)
....|.+ +....+++..+..|.+||+. +++ ++.+ ......+..++|+|||+. |+..+
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----l~s~s-------------- 268 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTY--HGHEGDINSVKFFPDGQR----FGTGS-------------- 268 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEE--CCCSSCCCEEEECTTSSE----EEEEC--------------
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEE--CCcCCCeEEEEEecCCCe----EEEEc--------------
Confidence 3344443 32233445567889999986 333 3444 334456789999999997 77665
Q ss_pred cCCCceEEEEcccccchhhhhhhhcCCCCCCcce-ecCCC-------CccccCceecCCCCEEEEEeccCCCCCCCCccc
Q 003363 332 NRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTES-------ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSAT 403 (826)
Q Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~Lt~~-------~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~ 403 (826)
.+..|.++|+ .++... .+... ...+....|||||+.|+..+.+
T Consensus 269 -~D~~i~lwd~-----------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d----------- 319 (380)
T 3iz6_a 269 -DDGTCRLFDM-----------------RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN----------- 319 (380)
T ss_dssp -SSSCEEEEET-----------------TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----------
T ss_pred -CCCeEEEEEC-----------------CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-----------
Confidence 3346888887 343322 22211 1235678999999988765543
Q ss_pred ceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEE
Q 003363 404 DSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 472 (826)
Q Consensus 404 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~ 472 (826)
..|++||..+++... .+... ...+...+..++|+|||+.| ++...++...+|.
T Consensus 320 g~i~vwd~~~~~~~~---------~~~~~------~~~h~~~v~~l~~s~dg~~l-~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 320 GDCYVWDTLLAEMVL---------NLGTL------QNSHEGRISCLGLSSDGSAL-CTGSWDKNLKIWA 372 (380)
T ss_dssp SCEEEEETTTCCEEE---------EECCS------CSSCCCCCCEEEECSSSSEE-EEECTTSCEEEEE
T ss_pred CCEEEEECCCCceEE---------EEecc------cCCCCCceEEEEECCCCCEE-EEeeCCCCEEEEe
Confidence 458999987654321 00000 00022245678899999965 5555566666664
No 344
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.10 E-value=1.4e-08 Score=107.97 Aligned_cols=248 Identities=15% Similarity=0.105 Sum_probs=135.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecC--CceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQ--SQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+....|||||++|+.....+ .+.+|.. ............. .....++|+++.|+..+.+...
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~-----~i~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~s~s~d~~~ 152 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDG-----TLRLWDLTTGTTTRRFVGHTKD---------VLSVAFSSDNRQIVSGSRDKTI 152 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSSC---------EEEEEECTTSSCEEEEETTSCE
T ss_pred CCEEEEEECCCCCEEEEEcccc-----cceEEeecccceeeeecCCCCc---------eeEEEEeecCccceeecCCCeE
Confidence 4588999999999998876543 4556632 2222222211111 1577899999999888766543
Q ss_pred CCCCccCCCCC-CCCCCccCCCCCCcceeecCCCcc--CCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCC
Q 003363 232 SKPTFSLGSTK-GGSSDKDCNSWKGQGDWEEDWGET--YAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEG 308 (826)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~g~~--~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~ 308 (826)
.. |+..... .......+........|.++.... +++.....|.+||+.+++..... ......+..++|+|||+.
T Consensus 153 ~~--~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~-~~h~~~v~~~~~s~~~~~ 229 (340)
T 4aow_A 153 KL--WNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH-IGHTGYLNTVTVSPDGSL 229 (340)
T ss_dssp EE--ECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSE
T ss_pred EE--EEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEe-cCCCCcEEEEEECCCCCE
Confidence 21 2211000 001111222222233444442221 23334678999999988765442 233446788999999997
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEE
Q 003363 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVF 388 (826)
Q Consensus 309 ~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f 388 (826)
|+..+ .+..|.++|+ .+............+....|+|++..++
T Consensus 230 ----l~s~s---------------~Dg~i~iwd~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~- 272 (340)
T 4aow_A 230 ----CASGG---------------KDGQAMLWDL-----------------NEGKHLYTLDGGDIINALCFSPNRYWLC- 272 (340)
T ss_dssp ----EEEEE---------------TTCEEEEEET-----------------TTTEEEEEEECSSCEEEEEECSSSSEEE-
T ss_pred ----EEEEe---------------CCCeEEEEEe-----------------ccCceeeeecCCceEEeeecCCCCceee-
Confidence 76655 3346888888 4444333333344567789999987554
Q ss_pred EeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeE
Q 003363 389 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 468 (826)
Q Consensus 389 ~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~ 468 (826)
.+.+ ..|.+||+.++......... ... .... .....+..++|+|||+.| ++...++..
T Consensus 273 ~~~d-----------~~i~iwd~~~~~~~~~~~~~--~~~-------~~~~-~h~~~v~~l~~s~dg~~l-~sgs~Dg~v 330 (340)
T 4aow_A 273 AATG-----------PSIKIWDLEGKIIVDELKQE--VIS-------TSSK-AEPPQCTSLAWSADGQTL-FAGYTDNLV 330 (340)
T ss_dssp EEET-----------TEEEEEETTTTEEEEEECCC-----------------CCCCCEEEEEECTTSSEE-EEEETTSCE
T ss_pred ccCC-----------CEEEEEECCCCeEEEecccc--cee-------eecc-CCCCCEEEEEECCCCCEE-EEEeCCCEE
Confidence 3322 45889998774432110000 000 0000 011234567899999966 455555655
Q ss_pred EEEEEECCCCc
Q 003363 469 VIISVNVSSGE 479 (826)
Q Consensus 469 ~l~~vdl~tg~ 479 (826)
.|| |+.+|+
T Consensus 331 ~iW--~~~tGt 339 (340)
T 4aow_A 331 RVW--QVTIGT 339 (340)
T ss_dssp EEE--EEEC--
T ss_pred EEE--eCCCcC
Confidence 555 555664
No 345
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.09 E-value=3.6e-09 Score=113.42 Aligned_cols=246 Identities=10% Similarity=0.057 Sum_probs=139.4
Q ss_pred ecCCCC---cceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEE------EeCCCCCeEEEEe
Q 003363 102 NSGNGN---GTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAV------VPSPSGSKLLVVR 172 (826)
Q Consensus 102 ~~~s~d---g~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~------~~SPdG~~la~~~ 172 (826)
-.++|+ |+.++... ....+.++++.........+.... ..+... +|||||+.|+...
T Consensus 71 ~~~~~~~~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~s~~~~~l~~~~ 136 (357)
T 3i2n_A 71 GTFGATSLQQRYLATGD---------FGGNLHIWNLEAPEMPVYSVKGHK-----EIINAIDGIGGLGIGEGAPEIVTGS 136 (357)
T ss_dssp EECTTCCTTTCCEEEEE---------TTSCEEEECTTSCSSCSEEECCCS-----SCEEEEEEESGGGCC-CCCEEEEEE
T ss_pred EEEcCCCCCCceEEEec---------CCCeEEEEeCCCCCccEEEEEecc-----cceEEEeeccccccCCCccEEEEEe
Confidence 345677 67665532 234566666643321233333222 335555 5799999998876
Q ss_pred cCCCCCCeEEEEec--CCc-eeEEEecCCCc-cccccCCCccccee----ecCCCCeEEEEeecCCCCCCCccCCCCCCC
Q 003363 173 NPENESPIQFELWS--QSQ-LEKEFHVPQTV-HGSVYADGWFEGIS----WNSDETLIAYVAEEPSPSKPTFSLGSTKGG 244 (826)
Q Consensus 173 ~~~~~~~~~~~i~~--~~~-~~~~~~~~~~~-~g~v~~~~~~~~~~----wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~ 244 (826)
..+ .+.+|+ .+. .........+. ...+ ..+. |+||++.|+..+.+
T Consensus 137 ~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~~~~~l~~~~~d---------------- 189 (357)
T 3i2n_A 137 RDG-----TVKVWDPRQKDDPVANMEPVQGENKRDC------WTVAFGNAYNQEERVVCAGYDN---------------- 189 (357)
T ss_dssp TTS-----CEEEECTTSCSSCSEEECCCTTSCCCCE------EEEEEECCCC-CCCEEEEEETT----------------
T ss_pred CCC-----eEEEEeCCCCCCcceeccccCCCCCCce------EEEEEEeccCCCCCEEEEEccC----------------
Confidence 543 456662 222 33333221111 1111 4444 89999988876432
Q ss_pred CCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEee---CCCCCccEEEEEeecCc
Q 003363 245 SSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAP---LNEGLHQYLVFVGWSSE 321 (826)
Q Consensus 245 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSP---Dg~~~~~~lvf~~~~~~ 321 (826)
..|.+||+.+++.... ......+..+.|+| +++. |+..+
T Consensus 190 ----------------------------~~i~i~d~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~----l~~~~---- 231 (357)
T 3i2n_A 190 ----------------------------GDIKLFDLRNMALRWE--TNIKNGVCSLEFDRKDISMNK----LVATS---- 231 (357)
T ss_dssp ----------------------------SEEEEEETTTTEEEEE--EECSSCEEEEEESCSSSSCCE----EEEEE----
T ss_pred ----------------------------CeEEEEECccCceeee--cCCCCceEEEEcCCCCCCCCE----EEEEC----
Confidence 5799999999887665 34445678999999 8886 76655
Q ss_pred ceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ce-----ecCCCCccccCceecCCCCEEEEEeccCCC
Q 003363 322 TRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VV-----NLTESISSAFFPRFSPDGKFLVFLSAKSSV 395 (826)
Q Consensus 322 ~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~-----~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~ 395 (826)
.+..|+++|+. ++. .. .+..+...+....|+|||+.+++....+
T Consensus 232 -----------~dg~i~i~d~~-----------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-- 281 (357)
T 3i2n_A 232 -----------LEGKFHVFDMR-----------------TQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGA-- 281 (357)
T ss_dssp -----------STTEEEEEEEE-----------------EEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETT--
T ss_pred -----------CCCeEEEEeCc-----------------CCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCC--
Confidence 23367778772 221 11 2225666788899999999544444332
Q ss_pred CCCCCcccceEEEEeCCCCCCCCcccc---------eeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCC
Q 003363 396 DSGAHSATDSLHRIDWPTNGNFSSLEK---------IVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (826)
Q Consensus 396 ~~g~~~~~~~l~~~d~~~~~~~~~~~~---------~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (826)
..|++||+..+........ .......... +...+..+.|+|||+.|+++...++
T Consensus 282 --------g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~l~~s~~~d~ 344 (357)
T 3i2n_A 282 --------GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL---------STQPISSLDWSPDKRGLCVCSSFDQ 344 (357)
T ss_dssp --------SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC---------CSSCEEEEEECSSSTTEEEEEETTS
T ss_pred --------CcEEEeecCCCcccccccCCCCccccccccceeecccc---------CCCCeeEEEEcCCCCeEEEEecCCC
Confidence 4588888776543211100 0011111110 1224557889999998876666666
Q ss_pred eEEEEEE
Q 003363 467 SQVIISV 473 (826)
Q Consensus 467 ~~~l~~v 473 (826)
...+|.+
T Consensus 345 ~i~iw~~ 351 (357)
T 3i2n_A 345 TVRVLIV 351 (357)
T ss_dssp EEEEEEE
T ss_pred cEEEEEC
Confidence 6666644
No 346
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.08 E-value=1.2e-08 Score=106.78 Aligned_cols=252 Identities=14% Similarity=0.039 Sum_probs=145.3
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~ 234 (826)
....|+|+|||+.|+++.... ..++.+...+.. +....... . ..++.++|||+.++. ..
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~---~~i~~~~~~~~~-~~~~~~~~---~------~~~l~~~~dg~l~v~--~~------ 87 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQ---NRTWAWSDDGQL-SPEMHPSH---H------QNGHCLNKQGHLIAC--SH------ 87 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGG---TEEEEEETTSCE-EEEESSCS---S------EEEEEECTTCCEEEE--ET------
T ss_pred cccCCeEeCCCCEEEEEeCCC---CEEEEEECCCCe-EEEECCCC---C------cceeeECCCCcEEEE--ec------
Confidence 466899999999888876543 246666643333 33322211 1 168999999984433 21
Q ss_pred CccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCC---CCccceEEEeeCCCCCcc
Q 003363 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~---~~~~~~~~wSPDg~~~~~ 311 (826)
....|+++|..+|+.+.+..... ...+..++++|||+
T Consensus 88 ------------------------------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~---- 127 (296)
T 3e5z_A 88 ------------------------------------GLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS---- 127 (296)
T ss_dssp ------------------------------------TTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC----
T ss_pred ------------------------------------CCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC----
Confidence 12579999998888776521111 12355789999997
Q ss_pred EEEEEeecCcce--eeeeee-eccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEE
Q 003363 312 YLVFVGWSSETR--KLGIKY-CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVF 388 (826)
Q Consensus 312 ~lvf~~~~~~~~--~~g~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f 388 (826)
|+++....... ..+... .......||+++. . +..+.+...........|+|||+.| +
T Consensus 128 -l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~-----------------~-g~~~~~~~~~~~~~gi~~s~dg~~l-v 187 (296)
T 3e5z_A 128 -LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP-----------------D-GTLSAPIRDRVKPNGLAFLPSGNLL-V 187 (296)
T ss_dssp -EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT-----------------T-SCEEEEECCCSSEEEEEECTTSCEE-E
T ss_pred -EEEECCccccccccccccccccCCCcEEEEECC-----------------C-CCEEEeecCCCCCccEEECCCCCEE-E
Confidence 66652100000 000000 0011247999986 4 5566665555556778999999988 5
Q ss_pred EeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeE
Q 003363 389 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 468 (826)
Q Consensus 389 ~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~ 468 (826)
.... ...|+++|+...+. +. .. ..++ .. .. ..+..+++++||+ |+++. ..
T Consensus 188 ~~~~----------~~~i~~~~~~~~g~--~~-~~---~~~~-~~-~~-------~~p~~i~~d~~G~-l~v~~----~~ 237 (296)
T 3e5z_A 188 SDTG----------DNATHRYCLNARGE--TE-YQ---GVHF-TV-EP-------GKTDGLRVDAGGL-IWASA----GD 237 (296)
T ss_dssp EETT----------TTEEEEEEECSSSC--EE-EE---EEEE-CC-SS-------SCCCSEEEBTTSC-EEEEE----TT
T ss_pred EeCC----------CCeEEEEEECCCCc--Cc-CC---CeEe-eC-CC-------CCCCeEEECCCCC-EEEEc----CC
Confidence 5533 25799999863222 10 00 1111 00 00 1234678999997 66655 34
Q ss_pred EEEEEECCCCcEEEecCCCCCeeeEEE-eecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 469 VIISVNVSSGELLRITPAESNFSWSLL-TLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 469 ~l~~vdl~tg~~~~lt~~~~~~~~~~~-s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
.|+++|.++..+..+..... .....| +++++.|++...+ .|+.++..++
T Consensus 238 ~v~~~~~~g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-----~l~~~~~~~~ 287 (296)
T 3e5z_A 238 GVHVLTPDGDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-----EFWSIETNVR 287 (296)
T ss_dssp EEEEECTTSCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-----EEEEEECSCC
T ss_pred eEEEECCCCCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-----eEEEEEcccc
Confidence 68888987655566655444 455567 4677777766543 5777776543
No 347
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.08 E-value=2.8e-09 Score=112.88 Aligned_cols=253 Identities=11% Similarity=0.093 Sum_probs=146.1
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecC--CCCeEEEEeecC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNS--DETLIAYVAEEP 229 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSP--Dg~~ia~~~~~~ 229 (826)
..+...+|||||++||..+..+ .+.+|+ .+....+..+ .+..+.| ..++|+| +|+.|+..+.+.
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~-----~v~lwd~~~~~~~~~~~l-~gH~~~V------~~v~~~~~~~~~~l~s~s~D~ 81 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDR-----SVKIFDVRNGGQILIADL-RGHEGPV------WQVAWAHPMYGNILASCSYDR 81 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTT-----EEEEEEEETTEEEEEEEE-ECCSSCE------EEEEECCGGGSSCEEEEETTS
T ss_pred CeEEEeeEcCCCCEEEEEeCCC-----eEEEEEecCCCcEEEEEE-cCCCccE------EEEEeCCCCCCCEEEEEECCC
Confidence 3588899999999999876543 456662 2322222222 2333334 7899987 489999888777
Q ss_pred CCCCCCccCCCCC--CCCCCccCCCCCCcceeecCC-C-ccCCCccCceEEEEEccCCc-eEecc-CCCCCCccceEEEe
Q 003363 230 SPSKPTFSLGSTK--GGSSDKDCNSWKGQGDWEEDW-G-ETYAGKRQPSLFVININSGE-VQAVK-GIPKSLSVGQVVWA 303 (826)
Q Consensus 230 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~-g-~~~~~~~~~~l~v~d~~~g~-~~~l~-~~~~~~~~~~~~wS 303 (826)
... .|+..... .......+...+....|.++- | ...++..+..|.+||+.++. ..... -......+..++|+
T Consensus 82 ~v~--iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (316)
T 3bg1_A 82 KVI--IWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWA 159 (316)
T ss_dssp CEE--EECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEEC
T ss_pred EEE--EEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEc
Confidence 554 33322111 111123455566677888872 3 33455567889999998763 22111 02233456788999
Q ss_pred eCC-----------------CCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCC---c
Q 003363 304 PLN-----------------EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---P 363 (826)
Q Consensus 304 PDg-----------------~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~ 363 (826)
|++ +. |+..+ .+..|.++|+. ..+ .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~----l~sgs---------------~D~~v~lWd~~----------------~~~~~~~ 204 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKR----FASGG---------------CDNLIKLWKEE----------------EDGQWKE 204 (316)
T ss_dssp CCCCC------CCSCCCCCCCB----EECCB---------------TTSBCCEEEEC----------------TTSCEEE
T ss_pred cccCCccccccccccCccccce----EEEec---------------CCCeEEEEEeC----------------CCCccce
Confidence 984 33 33322 23356667762 121 2
Q ss_pred ceecCCCCccccCceecCCC----CEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCc
Q 003363 364 VVNLTESISSAFFPRFSPDG----KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 439 (826)
Q Consensus 364 ~~~Lt~~~~~~~~p~~SpDG----~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 439 (826)
...+..+...+...+|+||+ +.|+..+.+ ..|.+||+.+......... +.. .
T Consensus 205 ~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D-----------~~v~iw~~~~~~~~~~~~~---~~~---~------- 260 (316)
T 3bg1_A 205 EQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD-----------GRVFIWTCDDASSNTWSPK---LLH---K------- 260 (316)
T ss_dssp EECCBCCSSCEEEEECCCCSSCSCCEEEEEETT-----------CEEEEEECSSTTCCCCBCC---EEE---E-------
T ss_pred eeecccCCCceEEEEecCCCCCCCceEEEEcCC-----------CeEEEEEccCccccchhhh---hhh---c-------
Confidence 34566677778899999997 667655544 4588888765321000000 000 0
Q ss_pred ccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEe
Q 003363 440 GLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 483 (826)
Q Consensus 440 g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~l 483 (826)
+...+..++|+|||+.| ++...++...||..+.. |+..++
T Consensus 261 --~~~~v~~v~~sp~g~~l-as~~~D~~v~lw~~~~~-g~~~~~ 300 (316)
T 3bg1_A 261 --FNDVVWHVSWSITANIL-AVSGGDNKVTLWKESVD-GQWVCI 300 (316)
T ss_dssp --CSSCEEEEEECTTTCCE-EEEESSSCEEEEEECTT-SCEEEE
T ss_pred --CCCcEEEEEEcCCCCEE-EEEcCCCeEEEEEECCC-CcEEEe
Confidence 11234577899999855 45566777788877653 555444
No 348
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.07 E-value=1.1e-08 Score=116.61 Aligned_cols=236 Identities=7% Similarity=-0.032 Sum_probs=137.6
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccC
Q 003363 160 VPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSL 238 (826)
Q Consensus 160 ~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~ 238 (826)
+++|+|+.++ ....++ .+.+++ ..++..+.+...... ..+.|||||++|+..+.+
T Consensus 144 ~~~p~~~~~v--s~~~d~--~V~v~D~~t~~~~~~i~~g~~~----------~~v~~spdg~~l~v~~~d---------- 199 (543)
T 1nir_A 144 DLDLPNLFSV--TLRDAG--QIALVDGDSKKIVKVIDTGYAV----------HISRMSASGRYLLVIGRD---------- 199 (543)
T ss_dssp CCCGGGEEEE--EEGGGT--EEEEEETTTCCEEEEEECSTTE----------EEEEECTTSCEEEEEETT----------
T ss_pred ccCCCCEEEE--EEcCCC--eEEEEECCCceEEEEEecCccc----------ceEEECCCCCEEEEECCC----------
Confidence 5889885443 332212 344444 445555555433333 588899999988776432
Q ss_pred CCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEc--cCCceEeccCCCCCCccceEEEee----CCCCCccE
Q 003363 239 GSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI--NSGEVQAVKGIPKSLSVGQVVWAP----LNEGLHQY 312 (826)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~--~~g~~~~l~~~~~~~~~~~~~wSP----Dg~~~~~~ 312 (826)
..|.+||+ .++++..- ++....+..++||| ||+.
T Consensus 200 ----------------------------------~~V~v~D~~~~t~~~~~~--i~~g~~p~~va~sp~~~~dg~~---- 239 (543)
T 1nir_A 200 ----------------------------------ARIDMIDLWAKEPTKVAE--IKIGIEARSVESSKFKGYEDRY---- 239 (543)
T ss_dssp ----------------------------------SEEEEEETTSSSCEEEEE--EECCSEEEEEEECCSTTCTTTE----
T ss_pred ----------------------------------CeEEEEECcCCCCcEEEE--EecCCCcceEEeCCCcCCCCCE----
Confidence 57999999 77765433 23344677899999 9996
Q ss_pred EEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcce-ecCCC-----------CccccCceec
Q 003363 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTES-----------ISSAFFPRFS 380 (826)
Q Consensus 313 lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~Lt~~-----------~~~~~~p~~S 380 (826)
|+.... .+..|.++|. .++++. .+... ........+|
T Consensus 240 l~v~~~--------------~~~~v~v~D~-----------------~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s 288 (543)
T 1nir_A 240 TIAGAY--------------WPPQFAIMDG-----------------ETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS 288 (543)
T ss_dssp EEEEEE--------------ESSEEEEEET-----------------TTCCEEEEEECCEECSSSCCEESCCCEEEEEEC
T ss_pred EEEEEc--------------cCCeEEEEec-----------------cccccceeecccCcccCccccccCCceEEEEEC
Confidence 655441 1236778887 454432 22211 1134567899
Q ss_pred CCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEE
Q 003363 381 PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 460 (826)
Q Consensus 381 pDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~ 460 (826)
|||+.+++.... ...|+++|..+.+...++ .++ . +. .+..+.|+|||++++.
T Consensus 289 ~~~~~~~vs~~~----------~g~i~vvd~~~~~~l~~~-----~i~---~---~~-------~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 289 HEHPEFIVNVKE----------TGKVLLVNYKDIDNLTVT-----SIG---A---AP-------FLHDGGWDSSHRYFMT 340 (543)
T ss_dssp SSSSEEEEEETT----------TTEEEEEECTTSSSCEEE-----EEE---C---CS-------SCCCEEECTTSCEEEE
T ss_pred CCCCEEEEEECC----------CCeEEEEEecCCCcceeE-----Eec---c---Cc-------CccCceECCCCCEEEE
Confidence 999987655433 367999998775432110 011 0 11 2346789999998876
Q ss_pred EEEeCCeEEEEEEECCCCcEEEecCCC-C---CeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 461 SSIWGSSQVIISVNVSSGELLRITPAE-S---NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 461 ~~~~~~~~~l~~vdl~tg~~~~lt~~~-~---~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
+...++ .|..+|+.++++....... . ......++++++.++++.+..+ ..|.+.+..+
T Consensus 341 a~~~~~--~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d--~~V~v~d~~~ 402 (543)
T 1nir_A 341 AANNSN--KVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD--GSISLIGTDP 402 (543)
T ss_dssp EEGGGT--EEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS--SEEEEEECCT
T ss_pred EecCCC--eEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC--ceEEEEEeCC
Confidence 543333 4666899999877654321 1 0111224667677665543222 2467777654
No 349
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.07 E-value=2e-08 Score=106.94 Aligned_cols=277 Identities=6% Similarity=-0.098 Sum_probs=152.5
Q ss_pred cCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCC--ccceeecCCcceecccEEEEeCCCCC-eEEEEecCCCCCC
Q 003363 103 SGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENEN--SVTFQWAPFPVEMTGASAVVPSPSGS-KLLVVRNPENESP 179 (826)
Q Consensus 103 ~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~--~~~lt~~~~~~~~~~~~~~~~SPdG~-~la~~~~~~~~~~ 179 (826)
.++|||+.++... ....+.++++...... ...+.... ..+...+|+|+|+ .|+.....+
T Consensus 18 ~~s~~~~~l~~~~---------~d~~v~iw~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~l~~~~~dg---- 79 (342)
T 1yfq_A 18 KIIPSKSLLLITS---------WDGSLTVYKFDIQAKNVDLLQSLRYK-----HPLLCCNFIDNTDLQIYVGTVQG---- 79 (342)
T ss_dssp EEEGGGTEEEEEE---------TTSEEEEEEEETTTTEEEEEEEEECS-----SCEEEEEEEESSSEEEEEEETTS----
T ss_pred EEcCCCCEEEEEc---------CCCeEEEEEeCCCCccccceeeeecC-----CceEEEEECCCCCcEEEEEcCCC----
Confidence 3478888776542 2346667776544311 22222222 4588999999999 888776433
Q ss_pred eEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcc
Q 003363 180 IQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQG 257 (826)
Q Consensus 180 ~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (826)
.+.+|+ .......+.. ....+.| ..+.|+| ++.|+..+.+
T Consensus 80 -~i~~wd~~~~~~~~~~~~-~~~~~~v------~~l~~~~-~~~l~s~~~d----------------------------- 121 (342)
T 1yfq_A 80 -EILKVDLIGSPSFQALTN-NEANLGI------CRICKYG-DDKLIAASWD----------------------------- 121 (342)
T ss_dssp -CEEEECSSSSSSEEECBS-CCCCSCE------EEEEEET-TTEEEEEETT-----------------------------
T ss_pred -eEEEEEeccCCceEeccc-cCCCCce------EEEEeCC-CCEEEEEcCC-----------------------------
Confidence 355663 3322222111 0022223 7899999 8888876432
Q ss_pred eeecCCCccCCCccCceEEEEEccC---------CceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeee
Q 003363 258 DWEEDWGETYAGKRQPSLFVININS---------GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIK 328 (826)
Q Consensus 258 ~~~~d~g~~~~~~~~~~l~v~d~~~---------g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~ 328 (826)
..|.+||+.+ ++.... ......+..++|+|++ |+..+
T Consensus 122 ---------------~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~------l~~~~----------- 167 (342)
T 1yfq_A 122 ---------------GLIEVIDPRNYGDGVIAVKNLNSNN--TKVKNKIFTMDTNSSR------LIVGM----------- 167 (342)
T ss_dssp ---------------SEEEEECHHHHTTBCEEEEESCSSS--SSSCCCEEEEEECSSE------EEEEE-----------
T ss_pred ---------------CeEEEEcccccccccccccCCeeeE--EeeCCceEEEEecCCc------EEEEe-----------
Confidence 5688899876 553333 3344567788998865 33333
Q ss_pred eeccCCCceEEEEcccccchhhhhhhhcCCCCC-Cc---ceecCCCCccccCceecC-CCCEEEEEeccCCCCCCCCccc
Q 003363 329 YCYNRPCALYAVRVSLYKSEASELELKESSSED-LP---VVNLTESISSAFFPRFSP-DGKFLVFLSAKSSVDSGAHSAT 403 (826)
Q Consensus 329 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~---~~~Lt~~~~~~~~p~~Sp-DG~~l~f~s~~~~~~~g~~~~~ 403 (826)
....|+.+|+ .+ +. ..........+....|+| ||+.|+..+.+
T Consensus 168 ----~d~~i~i~d~-----------------~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d----------- 215 (342)
T 1yfq_A 168 ----NNSQVQWFRL-----------------PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSID----------- 215 (342)
T ss_dssp ----STTEEEEEES-----------------SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETT-----------
T ss_pred ----CCCeEEEEEC-----------------CccccccceeeecCCCCceeEEEECCCCCCEEEEEecC-----------
Confidence 2337888998 33 22 123334455678899999 99988876654
Q ss_pred ceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEe
Q 003363 404 DSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 483 (826)
Q Consensus 404 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~l 483 (826)
..+.+|+++.++...... ....+.......-.......+..++|+|||+.|+ +...++ .|..+|+.+++....
T Consensus 216 g~i~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg--~i~vwd~~~~~~~~~ 288 (342)
T 1yfq_A 216 GRVAVEFFDDQGDDYNSS----KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY-TAGSDG--IISCWNLQTRKKIKN 288 (342)
T ss_dssp SEEEEEECCTTCCSTTCT----TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE-EEETTS--CEEEEETTTTEEEEE
T ss_pred CcEEEEEEcCCCcccccc----cceeeecccccccccccceeEEEEEEcCCCCEEE-EecCCc--eEEEEcCccHhHhhh
Confidence 357777777651100000 0000000000000000011345678999998665 433333 466678888876554
Q ss_pred cCCC-CCeeeEEEeecCCEEEEEEeCC
Q 003363 484 TPAE-SNFSWSLLTLDGDNIIAVSSSP 509 (826)
Q Consensus 484 t~~~-~~~~~~~~s~dg~~l~~~~s~~ 509 (826)
.... .. ....++++++.++....+.
T Consensus 289 ~~~~h~~-~v~~~~~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 289 FAKFNED-SVVKIACSDNILCLATSDD 314 (342)
T ss_dssp CCCCSSS-EEEEEEECSSEEEEEEECT
T ss_pred hhcccCC-CceEecCCCCeEEEEecCC
Confidence 4433 21 2223338888777666543
No 350
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=99.07 E-value=1.5e-09 Score=112.32 Aligned_cols=105 Identities=15% Similarity=0.079 Sum_probs=68.9
Q ss_pred EEEEEcCCCCCCCC-ccchHHHHHHHHC--CcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 594 LIVVLHGGPHSVSL-SSYSKSLAFLSSV--GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 594 ~vv~~HGg~~~~~~-~~~~~~~~~la~~--G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
.||++||.+..... ..|......|++. |+.|+++|+ | +|.+..... .+.....+++...++.+.....+ .
T Consensus 7 pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~~~d~-G---~g~s~~~~~--~~~~~~~~~~~~~~~~l~~~~~l-~ 79 (279)
T 1ei9_A 7 PLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLSLEI-G---KTLREDVEN--SFFLNVNSQVTTVCQILAKDPKL-Q 79 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEECCC-S---SSHHHHHHH--HHHSCHHHHHHHHHHHHHSCGGG-T
T ss_pred cEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEEEEEe-C---CCCcccccc--ccccCHHHHHHHHHHHHHhhhhc-c
Confidence 48999996654322 4688888888765 889999997 7 443321000 00011123344444444332112 2
Q ss_pred CcEEEEEecchHHHHHHHHHhCCCc-eeEEEecCCc
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQAPDK-FVAAAARNPL 705 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~p~~-~~a~v~~~p~ 705 (826)
+++.|+||||||.++..++.++|+. ++.+|+.++.
T Consensus 80 ~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~p 115 (279)
T 1ei9_A 80 QGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGGQ 115 (279)
T ss_dssp TCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESCC
T ss_pred CCEEEEEECHHHHHHHHHHHHcCCcccceEEEecCc
Confidence 6899999999999999999999984 9999877753
No 351
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.06 E-value=1.8e-08 Score=107.34 Aligned_cols=236 Identities=15% Similarity=0.180 Sum_probs=128.8
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCc------eeEEEecCCCccccccCCCcccceeecCCCCeEEEEee
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQ------LEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAE 227 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~------~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~ 227 (826)
..+...+|||+|+.||..+..+ .+.+|+... ..+....-.+..+.| ..++|||||++||..+.
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V------~~v~~sp~g~~las~s~ 127 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDS-----TVSIWAKEESADRTFEMDLLAIIEGHENEV------KGVAWSNDGYYLATCSR 127 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEEC-------CCCEEEEEEC----CE------EEEEECTTSCEEEEEET
T ss_pred CCEEEEEECCCCCEEEEEeCCC-----cEEEEEcccCcCccccceeEEEEcCCCCcE------EEEEECCCCCEEEEEeC
Confidence 4588999999999998876543 455663210 111111112232333 78999999999988754
Q ss_pred cCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEcc-CCc----eEeccCCCCCCccceEEE
Q 003363 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGE----VQAVKGIPKSLSVGQVVW 302 (826)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~g~----~~~l~~~~~~~~~~~~~w 302 (826)
+ ..|.+||+. +++ +..+ ......+..++|
T Consensus 128 D--------------------------------------------~~v~iwd~~~~~~~~~~~~~~--~~h~~~v~~v~~ 161 (330)
T 2hes_X 128 D--------------------------------------------KSVWIWETDESGEEYECISVL--QEHSQDVKHVIW 161 (330)
T ss_dssp T--------------------------------------------SCEEEEECCTTCCCCEEEEEE--CCCSSCEEEEEE
T ss_pred C--------------------------------------------CEEEEEeccCCCCCeEEEEEe--ccCCCceEEEEE
Confidence 3 468888884 322 2233 233446788999
Q ss_pred eeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCC---cceecCCCCccccCcee
Q 003363 303 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL---PVVNLTESISSAFFPRF 379 (826)
Q Consensus 303 SPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~Lt~~~~~~~~p~~ 379 (826)
+||++. |+..+ .+..|.++|. .++ ....+..+...+....|
T Consensus 162 ~p~~~~----l~s~s---------------~D~~i~iW~~-----------------~~~~~~~~~~~~~h~~~v~~~~~ 205 (330)
T 2hes_X 162 HPSEAL----LASSS---------------YDDTVRIWKD-----------------YDDDWECVAVLNGHEGTVWSSDF 205 (330)
T ss_dssp CSSSSE----EEEEE---------------TTSCEEEEEE-----------------ETTEEEEEEEECCCSSCEEEEEE
T ss_pred CCCCCE----EEEEc---------------CCCeEEEEEC-----------------CCCCeeEEEEccCCCCcEEEEEe
Confidence 999997 76665 2235666665 222 34556677777888999
Q ss_pred cCC--CCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCE
Q 003363 380 SPD--GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCT 457 (826)
Q Consensus 380 SpD--G~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~ 457 (826)
+|+ +..|+..+.+ ..|.+||+.++.... ......... +++.+...+..++|++++
T Consensus 206 ~~~~~~~~l~s~s~D-----------~~v~iw~~~~~~~~~--~~~~~~~~~--------~~~~h~~~v~~v~~s~~~-- 262 (330)
T 2hes_X 206 DKTEGVFRLCSGSDD-----------STVRVWKYMGDDEDD--QQEWVCEAI--------LPDVHKRQVYNVAWGFNG-- 262 (330)
T ss_dssp CCSSSSCEEEEEETT-----------SCEEEEEEEEECTTS--CEEEEEEEE--------CCSCCSSCEEEEEECTTS--
T ss_pred cCCCCeeEEEEEeCC-----------CeEEEEEecCCCccc--cceeEEeee--------cccccccceEEEEEcCCC--
Confidence 999 6666655543 347777765432210 000001111 111112234567898766
Q ss_pred EEEEEEeCCeEEEEEEECCCCcEEEe---cC-CCC-CeeeEEEeec-CCEEEEEEe
Q 003363 458 MLLSSIWGSSQVIISVNVSSGELLRI---TP-AES-NFSWSLLTLD-GDNIIAVSS 507 (826)
Q Consensus 458 l~~~~~~~~~~~l~~vdl~tg~~~~l---t~-~~~-~~~~~~~s~d-g~~l~~~~s 507 (826)
++++...++...||.+. +++.+.+ .. ... .+....|++. ++.++++.+
T Consensus 263 ~l~s~~~dg~v~iw~~~--~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s 316 (330)
T 2hes_X 263 LIASVGADGVLAVYEEV--DGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG 316 (330)
T ss_dssp CEEEEETTSCEEEEEEE--TTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE
T ss_pred EEEEEeCCCEEEEEEcC--CCceEEEeccccccccceEEEEEEecCCCceEEEEec
Confidence 34555556666676554 6643222 12 222 3444567773 233444443
No 352
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=99.06 E-value=4.3e-11 Score=135.25 Aligned_cols=127 Identities=20% Similarity=0.231 Sum_probs=88.8
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCcc-ch--HHHH-HH-HHCCcEEEEECCCCCC-CCc--hhhhhcCCCCC
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSS-YS--KSLA-FL-SSVGYSLLIVNYRGSL-GFG--EEALQSLPGKV 647 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~-~~--~~~~-~l-a~~G~~Vl~~d~rG~~-g~G--~~~~~~~~~~~ 647 (826)
+...+|.|.+....++.|+||++|||++...... +. ..+. .+ ...|++|+.+|||... |+. ....... .
T Consensus 98 l~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~~~~---~ 174 (534)
T 1llf_A 98 LTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEG---S 174 (534)
T ss_dssp CEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHHHHT---C
T ss_pred eEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCcccccccC---C
Confidence 4556888975444568899999999987654432 22 1121 22 3468999999999743 111 1111111 2
Q ss_pred CcchHHHHHHHHHHHHHc---CCCCCCcEEEEEecchHHHHHHHHHhC--------CCceeEEEecCCc
Q 003363 648 GSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--------PDKFVAAAARNPL 705 (826)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~a~~~--------p~~~~a~v~~~p~ 705 (826)
+...+.|+.++++|+.++ ...|++||.|+|+|+||.++..++... +.+|+++|+.+|.
T Consensus 175 ~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~ 243 (534)
T 1llf_A 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGA 243 (534)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCC
T ss_pred CchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccC
Confidence 344589999999999885 347999999999999999887776653 4689999999984
No 353
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.06 E-value=2.2e-08 Score=121.38 Aligned_cols=185 Identities=10% Similarity=0.028 Sum_probs=110.5
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFE 183 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~ 183 (826)
++|||+.++... ....+.+++.. +.+.. .+... ...+...+||| |++|+..+..+ .+.
T Consensus 25 fspdg~~lAsgs---------~Dg~I~lw~~~--~~~~~-~~~~~----~~~V~~l~fsp-g~~L~S~s~D~-----~v~ 82 (902)
T 2oaj_A 25 FDFTQNLLAIAT---------VTGEVHIYGQQ--QVEVV-IKLED----RSAIKEMRFVK-GIYLVVINAKD-----TVY 82 (902)
T ss_dssp EETTTTEEEEEE---------TTSEEEEECST--TCEEE-EECSS----CCCEEEEEEET-TTEEEEEETTC-----EEE
T ss_pred ECCCCCEEEEEe---------CCCEEEEEeCC--CcEEE-EEcCC----CCCEEEEEEcC-CCEEEEEECcC-----eEE
Confidence 378888776532 33466666542 22211 11111 14588999999 88888776543 577
Q ss_pred Eec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCC-----------CCCccC
Q 003363 184 LWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG-----------SSDKDC 250 (826)
Q Consensus 184 i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~ 250 (826)
+|+ .++....... ++.| ..++|+|||++|+..+.+.... .|+....... .....+
T Consensus 83 lWd~~~~~~~~~~~~----~~~V------~~v~~sp~g~~l~sgs~dg~V~--lwd~~~~~~~~~~i~~~~~~~~~~~~h 150 (902)
T 2oaj_A 83 VLSLYSQKVLTTVFV----PGKI------TSIDTDASLDWMLIGLQNGSMI--VYDIDRDQLSSFKLDNLQKSSFFPAAR 150 (902)
T ss_dssp EEETTTCSEEEEEEC----SSCE------EEEECCTTCSEEEEEETTSCEE--EEETTTTEEEEEEECCHHHHHTCSSSC
T ss_pred EEECCCCcEEEEEcC----CCCE------EEEEECCCCCEEEEEcCCCcEE--EEECCCCccccceeccccccccccccC
Confidence 783 3433333322 2233 7999999999999888776543 2332211110 122344
Q ss_pred CCCCCcceeecCC-CccCCCccCceEEEEEccCCceEec-cCC-----C-----------CCCccceEEEeeCCCCCccE
Q 003363 251 NSWKGQGDWEEDW-GETYAGKRQPSLFVININSGEVQAV-KGI-----P-----------KSLSVGQVVWAPLNEGLHQY 312 (826)
Q Consensus 251 ~~~~~~~~~~~d~-g~~~~~~~~~~l~v~d~~~g~~~~l-~~~-----~-----------~~~~~~~~~wSPDg~~~~~~ 312 (826)
...+....|.|+. +..+++..+..+ +||+.+++.... ... + ....+..++|+|||+.
T Consensus 151 ~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~---- 225 (902)
T 2oaj_A 151 LSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH---- 225 (902)
T ss_dssp CCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE----
T ss_pred CCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE----
Confidence 5566677888853 344555667788 999998875533 111 0 0134778999999997
Q ss_pred EEEEeecCcceeeeeeeeccCCCceEEEEc
Q 003363 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRV 342 (826)
Q Consensus 313 lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~ 342 (826)
|+..+ .+..|.++|+
T Consensus 226 lasgs---------------~Dg~i~lWd~ 240 (902)
T 2oaj_A 226 IITIH---------------EDNSLVFWDA 240 (902)
T ss_dssp EEEEE---------------TTCCEEEEET
T ss_pred EEEEE---------------CCCeEEEEEC
Confidence 77666 2336777777
No 354
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.04 E-value=5.2e-08 Score=103.65 Aligned_cols=259 Identities=14% Similarity=0.105 Sum_probs=147.2
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEec-CCCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~-~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
....++|+|||+ |+++...+ ..++.++ .+++...+... ...+ .++.|+|||+.++......
T Consensus 46 ~~~~~~~~~~g~-l~~~~~~~---~~i~~~d~~~~~~~~~~~~~~~~~----------~~i~~~~dg~l~v~~~~~~--- 108 (333)
T 2dg1_A 46 QLEGLNFDRQGQ-LFLLDVFE---GNIFKINPETKEIKRPFVSHKANP----------AAIKIHKDGRLFVCYLGDF--- 108 (333)
T ss_dssp CEEEEEECTTSC-EEEEETTT---CEEEEECTTTCCEEEEEECSSSSE----------EEEEECTTSCEEEEECTTS---
T ss_pred cccCcEECCCCC-EEEEECCC---CEEEEEeCCCCcEEEEeeCCCCCc----------ceEEECCCCcEEEEeCCCC---
Confidence 357889999998 55543322 2566666 45555554421 2222 6899999997444331110
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEec-cCCCCCCccceEEEeeCCCCCcc
Q 003363 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l-~~~~~~~~~~~~~wSPDg~~~~~ 311 (826)
.....|+++|.++++.+.+ ........+..++++|||+
T Consensus 109 -------------------------------------~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~---- 147 (333)
T 2dg1_A 109 -------------------------------------KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG---- 147 (333)
T ss_dssp -------------------------------------SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC----
T ss_pred -------------------------------------CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC----
Confidence 0125799999998887643 2112233567889999996
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEec
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 391 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~ 391 (826)
|++....... ......||++|. ++++.+.+.........+.|+|||+.|++...
T Consensus 148 -l~v~~~~~~~--------~~~~~~l~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 148 -FYFTDFRGYS--------TNPLGGVYYVSP-----------------DFRTVTPIIQNISVANGIALSTDEKVLWVTET 201 (333)
T ss_dssp -EEEEECCCBT--------TBCCEEEEEECT-----------------TSCCEEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred -EEEEeccccc--------cCCCceEEEEeC-----------------CCCEEEEeecCCCcccceEECCCCCEEEEEeC
Confidence 6665532110 012347999987 55666655443334567899999998877654
Q ss_pred cCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEE
Q 003363 392 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 471 (826)
Q Consensus 392 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~ 471 (826)
. ...|+++|+.+++........ .+. ...... ..+..+++++||+ |+++... ...|+
T Consensus 202 ~----------~~~i~~~d~~~~g~~~~~~~~-~~~--~~~~~~--------~~~~~i~~d~~G~-l~v~~~~--~~~v~ 257 (333)
T 2dg1_A 202 T----------ANRLHRIALEDDGVTIQPFGA-TIP--YYFTGH--------EGPDSCCIDSDDN-LYVAMYG--QGRVL 257 (333)
T ss_dssp G----------GTEEEEEEECTTSSSEEEEEE-EEE--EECCSS--------SEEEEEEEBTTCC-EEEEEET--TTEEE
T ss_pred C----------CCeEEEEEecCCCcCcccccc-eEE--EecCCC--------CCCCceEECCCCC-EEEEEcC--CCEEE
Confidence 3 256999998653221100000 000 000000 0123567889997 6555432 23677
Q ss_pred EEECCCCcEEEecCCCC------CeeeEEEeecCCEEEEEEeCCC--CCCeEEEEeec
Q 003363 472 SVNVSSGELLRITPAES------NFSWSLLTLDGDNIIAVSSSPV--DVPQVKYGYFV 521 (826)
Q Consensus 472 ~vdl~tg~~~~lt~~~~------~~~~~~~s~dg~~l~~~~s~~~--~p~~l~~~~~~ 521 (826)
++|.++..+..+..... ......+++|++.|++...... ....|+.+++.
T Consensus 258 ~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 258 VFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp EECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred EECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 78886555555543321 2345577888888887766533 23456666643
No 355
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.03 E-value=2.2e-07 Score=101.18 Aligned_cols=300 Identities=9% Similarity=0.043 Sum_probs=157.5
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCCcc-ceeecCCcceecccEEEEeCCCCCeEEEEecC------CCC
Q 003363 105 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSV-TFQWAPFPVEMTGASAVVPSPSGSKLLVVRNP------ENE 177 (826)
Q Consensus 105 s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~-~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~------~~~ 177 (826)
.+|++++ |..++.. . +.. ..+..++. ...+.+ ++.... .. ..++||||++|+..... ++.
T Consensus 81 ~~~~~~v-yV~n~~~-~-~~~-~~VsVID~--~t~~vv~~I~vG~------~P-gia~SpDgk~lyVan~~~~~~~~G~~ 147 (426)
T 3c75_H 81 APDARRV-YIQDPAH-F-AAI-TQQFVIDG--STGRILGMTDGGF------LP-HPVAAEDGSFFAQASTVFERIARGKR 147 (426)
T ss_dssp CCCTTEE-EEEECTT-T-CSS-EEEEEEET--TTTEEEEEEEECS------SC-EEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred CCCCCEE-EEECCCc-C-CCC-CeEEEEEC--CCCEEEEEEECCC------CC-ceEECCCCCEEEEEeccccccccCCC
Confidence 3788775 6655432 0 001 45666553 333322 222222 24 78999999999766421 001
Q ss_pred CCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCc
Q 003363 178 SPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQ 256 (826)
Q Consensus 178 ~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (826)
...+..++ ...+..+.+.+...... -....-.++.+||||++|+.....
T Consensus 148 ~~~VsviD~~t~~vv~~I~v~g~~r~--~~g~~P~~~~~spDGk~lyV~n~~---------------------------- 197 (426)
T 3c75_H 148 TDYVEVFDPVTFLPIADIELPDAPRF--LVGTYQWMNALTPDNKNLLFYQFS---------------------------- 197 (426)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCC--CBSCCGGGSEECTTSSEEEEEECS----------------------------
T ss_pred CCEEEEEECCCCcEEEEEECCCcccc--ccCCCcceEEEcCCCCEEEEEecC----------------------------
Confidence 23466666 45556665555311000 000001588999999987765321
Q ss_pred ceeecCCCccCCCccCceEEEEEccCCceEe-ccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCC
Q 003363 257 GDWEEDWGETYAGKRQPSLFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 335 (826)
Q Consensus 257 ~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~-l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~ 335 (826)
....|.++|+.++++.. +. .++ .....|+|+. .++... .+.
T Consensus 198 --------------~~~~VsVID~~t~kvv~~I~-v~g-----~~~~~p~g~~----~~v~~~--------------~dG 239 (426)
T 3c75_H 198 --------------PAPAVGVVDLEGKTFDRMLD-VPD-----CYHIFPASPT----VFYMNC--------------RDG 239 (426)
T ss_dssp --------------SSCEEEEEETTTTEEEEEEE-CCS-----EEEEEEEETT----EEEEEE--------------TTS
T ss_pred --------------CCCeEEEEECCCCeEEEEEE-cCC-----ceeeccCCCc----EEEEEc--------------CCC
Confidence 12679999999988653 31 211 1344566655 444331 122
Q ss_pred ceEEEEcccccchhhhhhhhcCCCCCCcce-e----cCCCCc-cccCceecCCCCEEEEEeccCCCCCCCCcccceEEEE
Q 003363 336 ALYAVRVSLYKSEASELELKESSSEDLPVV-N----LTESIS-SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRI 409 (826)
Q Consensus 336 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~----Lt~~~~-~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~ 409 (826)
.+..+++ .+++.. . +..... ....+.|++||+.++|.+.. ..++++
T Consensus 240 ~~~~V~~-----------------~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~-----------g~V~Vi 291 (426)
T 3c75_H 240 SLARVDF-----------------ADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYT-----------GKIFQA 291 (426)
T ss_dssp SEEEEEC-----------------CTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTT-----------SEEEEE
T ss_pred CEEEEEC-----------------CCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCC-----------CcEEEE
Confidence 4555554 222211 1 111111 12346789999999888642 369999
Q ss_pred eCCCCCCCCcccceeeeeeeeeccCCCC-CcccccCCCCCCccccCCCEEEEEEEeC-------CeEEEEEEECCCCcEE
Q 003363 410 DWPTNGNFSSLEKIVDVIPVVQCAEGDC-FPGLYSSSILSNPWLSDGCTMLLSSIWG-------SSQVIISVNVSSGELL 481 (826)
Q Consensus 410 d~~~~~~~~~~~~~~~~~~~~~~~~~~~-f~g~~~~~~~~~~ws~Dg~~l~~~~~~~-------~~~~l~~vdl~tg~~~ 481 (826)
|+.++....+. .+....... -.|....+...+.+++||+++|+..... ....|..+|+.++++.
T Consensus 292 D~~~~~~~v~~--------~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv 363 (426)
T 3c75_H 292 DLTAEGATFRA--------PIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERI 363 (426)
T ss_dssp EECSSCEEECC--------CEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE
T ss_pred eccCCceEEee--------eeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEE
Confidence 98764432110 000000000 0000001223467899999998876532 2468999999998866
Q ss_pred EecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 482 RITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 482 ~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
.-.+-........+++||+.++++.... -..|.++|+.+.
T Consensus 364 ~~I~vg~~P~gia~spDg~~~lyv~n~~--s~~VsVID~~t~ 403 (426)
T 3c75_H 364 NKIELGHEIDSINVSQDAEPLLYALSAG--TQTLHIYDAATG 403 (426)
T ss_dssp EEEEEEEEECEEEECCSSSCEEEEEETT--TTEEEEEETTTC
T ss_pred EEEECCCCcCeEEEccCCCEEEEEEcCC--CCeEEEEECCCC
Confidence 4332222234457899999444444422 245888887654
No 356
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.03 E-value=4.3e-09 Score=116.96 Aligned_cols=206 Identities=8% Similarity=0.016 Sum_probs=131.0
Q ss_pred cceeecC-CCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCC-ccCCCccCceEEEEEccCCceEec
Q 003363 211 EGISWNS-DETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWG-ETYAGKRQPSLFVININSGEVQAV 288 (826)
Q Consensus 211 ~~~~wSP-Dg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g-~~~~~~~~~~l~v~d~~~g~~~~l 288 (826)
.+++|+| +++.||..+.++....+.+.............+...+....|.|.-+ ..+++..+..|.+||+.++..+.+
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~ 202 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVF 202 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEE
Confidence 7899999 56778888777765433222211111223345666777888987434 445566678899999998877665
Q ss_pred cC-CCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceec
Q 003363 289 KG-IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL 367 (826)
Q Consensus 289 ~~-~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L 367 (826)
.. ......+..++|+|||+. |+..+ .+..|+++|+ .+.....+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~----l~~g~---------------~dg~i~~wd~-----------------~~~~~~~~ 246 (435)
T 4e54_B 203 ASSDTINIWFCSLDVSASSRM----VVTGD---------------NVGNVILLNM-----------------DGKELWNL 246 (435)
T ss_dssp ECCSSCSCCCCCEEEETTTTE----EEEEC---------------SSSBEEEEES-----------------SSCBCCCS
T ss_pred eccCCCCccEEEEEECCCCCE----EEEEe---------------CCCcEeeecc-----------------CcceeEEE
Confidence 31 122334668899999996 66554 3347889998 66666777
Q ss_pred CCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCC
Q 003363 368 TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSIL 447 (826)
Q Consensus 368 t~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~ 447 (826)
..+...+....|+|+|+.++.....+ ..|.+||+.+........... .+...+.
T Consensus 247 ~~h~~~v~~v~~~p~~~~~~~s~s~d----------~~v~iwd~~~~~~~~~~~~~~----------------~h~~~v~ 300 (435)
T 4e54_B 247 RMHKKKVTHVALNPCCDWFLATASVD----------QTVKIWDLRQVRGKASFLYSL----------------PHRHPVN 300 (435)
T ss_dssp BCCSSCEEEEEECTTCSSEEEEEETT----------SBCCEEETTTCCSSSCCSBCC----------------BCSSCEE
T ss_pred ecccceEEeeeecCCCceEEEEecCc----------ceeeEEecccccccceEEEee----------------ecccccc
Confidence 77777888999999998766555443 357788887654321110000 0112345
Q ss_pred CCccccCCCEEEEEEEeCCeEEEEEEECCCCcEE
Q 003363 448 SNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL 481 (826)
Q Consensus 448 ~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~ 481 (826)
.++|+|||+.|+ +...++. |..+|+.+++..
T Consensus 301 ~~~~spdg~~l~-s~~~D~~--i~iwd~~~~~~~ 331 (435)
T 4e54_B 301 AACFSPDGARLL-TTDQKSE--IRVYSASQWDCP 331 (435)
T ss_dssp ECCBCTTSSEEE-EEESSSC--EEEEESSSSSSE
T ss_pred ceeECCCCCeeE-EEcCCCE--EEEEECCCCccc
Confidence 678999999664 4444444 455577666543
No 357
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.03 E-value=6.8e-09 Score=115.13 Aligned_cols=148 Identities=14% Similarity=0.164 Sum_probs=91.9
Q ss_pred ceEEEEEccCCc----eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccch
Q 003363 273 PSLFVININSGE----VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 348 (826)
Q Consensus 273 ~~l~v~d~~~g~----~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 348 (826)
..|.+||+.++. ...+ ......+..++|+|+++. +++++. .+..|.++|+..
T Consensus 254 g~i~i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~----~l~tg~--------------~dg~v~vwd~~~---- 309 (430)
T 2xyi_A 254 QKLMIWDTRNNNTSKPSHTV--DAHTAEVNCLSFNPYSEF----ILATGS--------------ADKTVALWDLRN---- 309 (430)
T ss_dssp SEEEEEETTCSCSSSCSEEE--ECCSSCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEETTC----
T ss_pred CeEEEEECCCCCCCcceeEe--ecCCCCeEEEEeCCCCCC----EEEEEe--------------CCCeEEEEeCCC----
Confidence 679999998762 2333 234456788999999998 777662 234788999831
Q ss_pred hhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccce----e
Q 003363 349 ASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI----V 424 (826)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~----~ 424 (826)
.......+..+...+....|+|+|+.++.....+ ..|.+||+...+........ .
T Consensus 310 -----------~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~ 368 (430)
T 2xyi_A 310 -----------LKLKLHSFESHKDEIFQVQWSPHNETILASSGTD----------RRLHVWDLSKIGEEQSTEDAEDGPP 368 (430)
T ss_dssp -----------TTSCSEEEECCSSCEEEEEECSSCTTEEEEEETT----------SCCEEEEGGGTTCCCCHHHHHHCCT
T ss_pred -----------CCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCC----------CcEEEEeCCCCccccCccccccCCc
Confidence 1233556666777889999999998765555432 45888888763321110000 0
Q ss_pred eeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEE
Q 003363 425 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 474 (826)
Q Consensus 425 ~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vd 474 (826)
.+.... .+ +...+..+.|+|+++.++++...++...+|.++
T Consensus 369 ~~~~~~--------~~-h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 369 ELLFIH--------GG-HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TEEEEC--------CC-CSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred ceEEEc--------CC-CCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 011100 00 112355788999999677777777777777764
No 358
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.03 E-value=3.4e-08 Score=103.91 Aligned_cols=252 Identities=10% Similarity=0.030 Sum_probs=143.9
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~ 234 (826)
....|+|+|||+.|+|+.... ..++.+..+++........... .++.|+|||+.++. +.
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~---~~i~~~~~~g~~~~~~~~~~~~----------~gl~~d~dG~l~v~--~~------ 104 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVG---RRVLGWREDGTVDVLLDATAFT----------NGNAVDAQQRLVHC--EH------ 104 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTT---TEEEEEETTSCEEEEEESCSCE----------EEEEECTTSCEEEE--ET------
T ss_pred CccCCeEeCCCCEEEEEECCC---CEEEEEeCCCCEEEEeCCCCcc----------ceeeECCCCCEEEE--EC------
Confidence 356799999999998886533 2455555545544333322222 68899999984443 21
Q ss_pred CccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCC---CCccceEEEeeCCCCCcc
Q 003363 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~---~~~~~~~~wSPDg~~~~~ 311 (826)
....|++++.+ |+.+.+..... ...+..++++|||+
T Consensus 105 ------------------------------------~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~---- 143 (305)
T 3dr2_A 105 ------------------------------------GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA---- 143 (305)
T ss_dssp ------------------------------------TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC----
T ss_pred ------------------------------------CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC----
Confidence 12467888876 66555521111 12356789999997
Q ss_pred EEEEEeecCcc--eeeeeee-eccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEE
Q 003363 312 YLVFVGWSSET--RKLGIKY-CYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVF 388 (826)
Q Consensus 312 ~lvf~~~~~~~--~~~g~~~-~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f 388 (826)
|+|+...... ...+... .......||++|. ++++.+.+. .......+.|||||+.|++
T Consensus 144 -l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~-----------------~~g~~~~~~-~~~~p~gl~~spdg~~lyv 204 (305)
T 3dr2_A 144 -IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP-----------------DGSPLQRMA-DLDHPNGLAFSPDEQTLYV 204 (305)
T ss_dssp -EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS-----------------SSCCCEEEE-EESSEEEEEECTTSSEEEE
T ss_pred -EEEeCcCCCccccccccccccccCCCeEEEEcC-----------------CCCcEEEEe-cCCCCcceEEcCCCCEEEE
Confidence 7775210000 0000000 0011247999997 667777665 4444566899999998877
Q ss_pred EeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeE
Q 003363 389 LSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 468 (826)
Q Consensus 389 ~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~ 468 (826)
...... ......|+++++.+++ +.. ...... . .. .....+.+.+||+ |+++. . .
T Consensus 205 ~~~~~~-----~~~~~~i~~~~~~~~~---l~~-~~~~~~---~-~~--------~~pdgi~~d~~G~-lwv~~--~--~ 258 (305)
T 3dr2_A 205 SQTPEQ-----GHGSVEITAFAWRDGA---LHD-RRHFAS---V-PD--------GLPDGFCVDRGGW-LWSSS--G--T 258 (305)
T ss_dssp EECCC--------CCCEEEEEEEETTE---EEE-EEEEEC---C-SS--------SCCCSEEECTTSC-EEECC--S--S
T ss_pred EecCCc-----CCCCCEEEEEEecCCC---ccC-CeEEEE---C-CC--------CCCCeEEECCCCC-EEEec--C--C
Confidence 664321 0123579999987643 111 001111 0 00 1234567889998 66553 2 2
Q ss_pred EEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEe
Q 003363 469 VIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGY 519 (826)
Q Consensus 469 ~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~ 519 (826)
.|+++|.++.....+..... .....|+++++.|++...+ .|+.++
T Consensus 259 gv~~~~~~g~~~~~~~~~~~-~~~~~f~~d~~~L~it~~~-----~l~~~~ 303 (305)
T 3dr2_A 259 GVCVFDSDGQLLGHIPTPGT-ASNCTFDQAQQRLFITGGP-----CLWMLP 303 (305)
T ss_dssp EEEEECTTSCEEEEEECSSC-CCEEEECTTSCEEEEEETT-----EEEEEE
T ss_pred cEEEECCCCCEEEEEECCCc-eeEEEEeCCCCEEEEEcCC-----eEEEEE
Confidence 48899987666666655443 4556777777777766543 455554
No 359
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.03 E-value=1.6e-08 Score=112.17 Aligned_cols=184 Identities=15% Similarity=0.087 Sum_probs=107.3
Q ss_pred ceEEEEEccCCce--------EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEccc
Q 003363 273 PSLFVININSGEV--------QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSL 344 (826)
Q Consensus 273 ~~l~v~d~~~g~~--------~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 344 (826)
..|.+||+.++.. ..+ ......+..++|+|++.. +++++. ....|+++|+..
T Consensus 204 g~i~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----~l~s~~--------------~dg~i~i~d~~~ 263 (430)
T 2xyi_A 204 HTICLWDINATPKEHRVIDAKNIF--TGHTAVVEDVAWHLLHES----LFGSVA--------------DDQKLMIWDTRN 263 (430)
T ss_dssp SCEEEEETTSCCBGGGEEECSEEE--CCCSSCEEEEEECSSCTT----EEEEEE--------------TTSEEEEEETTC
T ss_pred CeEEEEeCCCCCCCCceeccceee--cCCCCCEeeeEEeCCCCC----EEEEEe--------------CCCeEEEEECCC
Confidence 5688999876321 222 234446788999997766 666552 334788999831
Q ss_pred ccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCccccee
Q 003363 345 YKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV 424 (826)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 424 (826)
.. .......+..+...+....|+|+|++++.....+ ..|.+||+.+......+
T Consensus 264 ~~-------------~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d----------g~v~vwd~~~~~~~~~~---- 316 (430)
T 2xyi_A 264 NN-------------TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD----------KTVALWDLRNLKLKLHS---- 316 (430)
T ss_dssp SC-------------SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT----------SEEEEEETTCTTSCSEE----
T ss_pred CC-------------CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC----------CeEEEEeCCCCCCCeEE----
Confidence 00 0123444555666788999999999765555443 46999998764321100
Q ss_pred eeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCC------------CcEEEecCC-CCCee
Q 003363 425 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS------------GELLRITPA-ESNFS 491 (826)
Q Consensus 425 ~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~t------------g~~~~lt~~-~~~~~ 491 (826)
+.. ....+..+.|+|+++.++++...++...+|.++..+ .+....... ...+.
T Consensus 317 -----~~~---------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 382 (430)
T 2xyi_A 317 -----FES---------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 382 (430)
T ss_dssp -----EEC---------CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEE
T ss_pred -----eec---------CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCce
Confidence 000 111345778999998777777766666666443211 123222222 23456
Q ss_pred eEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 003363 492 WSLLTLDGDNIIAVSSSPVDVPQVKYGYF 520 (826)
Q Consensus 492 ~~~~s~dg~~l~~~~s~~~~p~~l~~~~~ 520 (826)
...|++++..++++.+... .|.+.++
T Consensus 383 ~~~~~p~~~~~l~s~s~dg---~i~iw~~ 408 (430)
T 2xyi_A 383 DFSWNPNEPWIICSVSEDN---IMQVWQM 408 (430)
T ss_dssp EEEECSSSTTEEEEEETTS---EEEEEEE
T ss_pred EEEECCCCCCEEEEEECCC---CEEEeEc
Confidence 6678888885555555332 3555554
No 360
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.02 E-value=8.8e-08 Score=105.69 Aligned_cols=244 Identities=15% Similarity=0.099 Sum_probs=154.5
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 156 ASAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
.....||+++ .||...+. .+.+| ..++..++..+.. ..+.| .+++|||||+.||..+.+
T Consensus 108 ~~~l~wS~~n-~lAvgld~------tV~lWd~~tg~~~~~~~~~~-~~~~V------~sv~fspdg~~lasgs~D----- 168 (420)
T 4gga_A 108 LNLVDWSSGN-VLAVALDN------SVYLWSASSGDILQLLQMEQ-PGEYI------SSVAWIKEGNYLAVGTSS----- 168 (420)
T ss_dssp CBCEEECTTS-EEEEEETT------EEEEEETTTCCEEEEEECCS-TTCCE------EEEEECTTSSEEEEEETT-----
T ss_pred ceeEEECCCC-EEEEEeCC------EEEEEECCCCCEEEEEEecC-CCCcE------EEEEECCCCCEEEEEECC-----
Confidence 4568999864 77765432 46778 4566666665432 21223 899999999999886543
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEE
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (826)
..|.+||+.+++..... ......+. ++++|++. |
T Consensus 169 ---------------------------------------g~v~iWd~~~~~~~~~~-~~h~~~v~--~~s~~~~~----l 202 (420)
T 4gga_A 169 ---------------------------------------AEVQLWDVQQQKRLRNM-TSHSARVG--SLSWNSYI----L 202 (420)
T ss_dssp ---------------------------------------SCEEEEETTTTEEEEEE-CCCSSCEE--EEEEETTE----E
T ss_pred ---------------------------------------CeEEEEEcCCCcEEEEE-eCCCCceE--EEeeCCCE----E
Confidence 56899999988765441 22222333 45667775 5
Q ss_pred EEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccC
Q 003363 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKS 393 (826)
Q Consensus 314 vf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~ 393 (826)
+..+ ....++.+|... .......+..+........|+|+|++|+..+.+
T Consensus 203 ~sgs---------------~d~~i~~~d~~~---------------~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D- 251 (420)
T 4gga_A 203 SSGS---------------RSGHIHHHDVRV---------------AEHHVATLSGHSQEVCGLRWAPDGRHLASGGND- 251 (420)
T ss_dssp EEEE---------------TTSEEEEEETTS---------------SSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-
T ss_pred EEEe---------------CCCceeEeeecc---------------cceeeEEecccccceeeeeecCCCCeeeeeecc-
Confidence 5444 334677777621 223345566677778889999999998877655
Q ss_pred CCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003363 394 SVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (826)
Q Consensus 394 ~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~v 473 (826)
..+.+++..++........... . ....+..+.|+|++..++++.....+..|..+
T Consensus 252 ----------~~v~i~~~~~~~~~~~~~~~~~-----------~----~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 252 ----------NLVNVWPSAPGEGGWVPLQTFT-----------Q----HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 306 (420)
T ss_dssp ----------SCEEEEESSCCSSCSCCSEEEC-----------C----CSSCEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred ----------ccceEEeeccccccceeeeeec-----------c----cCCceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence 3478888877554221110000 0 11134467899988878776655556677888
Q ss_pred ECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 474 NVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 474 dl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
|+.+++..........+....++++++.++......+. .|.+.+..+
T Consensus 307 d~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~--~I~iwd~~~ 353 (420)
T 4gga_A 307 NVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQN--QLVIWKYPT 353 (420)
T ss_dssp ETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTC--CEEEEETTT
T ss_pred eCCccccceeeccccceeeeeecCCCCeEEEEEecCCC--EEEEEECCC
Confidence 99999877766655556667889999988876644332 366666543
No 361
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.02 E-value=2.2e-07 Score=100.13 Aligned_cols=122 Identities=7% Similarity=-0.056 Sum_probs=71.4
Q ss_pred ceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeecc-CCCCCcccccCCCCCCccccCC
Q 003363 377 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCA-EGDCFPGLYSSSILSNPWLSDG 455 (826)
Q Consensus 377 p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~f~g~~~~~~~~~~ws~Dg 455 (826)
..++|||+.++|.+.. ..++++|+.++....+. ..++.... ....+ ...+...+.++||+
T Consensus 205 ~~~~~~g~~~~~~~~~-----------~~v~v~d~~~~~~~~~~-----~~~~~~~~~~~~~~---~p~g~~~~a~~~dg 265 (361)
T 2oiz_A 205 IAPALDKDKAHFVSYY-----------GNVYSADFSGDEVKVDG-----PWSLLNDEDKAKNW---VPGGYNLVGLHRAS 265 (361)
T ss_dssp SCCEECSSEEEEEBTT-----------SEEEEEECSSSSCEEEE-----EEESCCHHHHHTTC---EECCSSCEEEETTT
T ss_pred EEecccCCEEEEEeCC-----------CeEEEEEecCCCceecc-----cccccCcccccccc---ccCCeeEEEEecCC
Confidence 3458999998887642 35999998765432110 00000000 00000 00122246789999
Q ss_pred CEEEEEEEeC--------CeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 456 CTMLLSSIWG--------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 456 ~~l~~~~~~~--------~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
+++|+..... ....++.+|++++++..-..... .....+++||+.++. ... ..|.++|..+.
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v-~n~----~~v~v~D~~t~ 335 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLT-LDG----GNVNVYDISQP 335 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEE-ECS----SCEEEEECSSS
T ss_pred CeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEE-eCC----CeEEEEECCCC
Confidence 9888765411 23589999999988765433333 556789999996654 332 66888886544
No 362
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.02 E-value=8e-08 Score=100.59 Aligned_cols=242 Identities=12% Similarity=0.071 Sum_probs=140.7
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 003363 156 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (826)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~ 235 (826)
...|.|+|+++.|+++... ...++.++..+...........+ .++.|+|||+ |+.. .
T Consensus 15 ~Egp~w~~~~~~l~~~d~~---~~~i~~~d~~~~~~~~~~~~~~~----------~~i~~~~dG~-l~v~-~-------- 71 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIP---AKKVCRWDSFTKQVQRVTMDAPV----------SSVALRQSGG-YVAT-I-------- 71 (297)
T ss_dssp EEEEEEETTTTEEEEEETT---TTEEEEEETTTCCEEEEECSSCE----------EEEEEBTTSS-EEEE-E--------
T ss_pred ccCCeEECCCCEEEEEECC---CCEEEEEECCCCcEEEEeCCCce----------EEEEECCCCC-EEEE-E--------
Confidence 4578999999999887543 23566666333333344444333 7899999999 3332 1
Q ss_pred ccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCC---CCCccceEEEeeCCCCCccE
Q 003363 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP---KSLSVGQVVWAPLNEGLHQY 312 (826)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~---~~~~~~~~~wSPDg~~~~~~ 312 (826)
...|+++|.++++.+.+.... ......+++++|||+
T Consensus 72 ------------------------------------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~----- 110 (297)
T 3g4e_A 72 ------------------------------------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR----- 110 (297)
T ss_dssp ------------------------------------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-----
T ss_pred ------------------------------------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-----
Confidence 146899999998877663111 122456789999998
Q ss_pred EEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEecc
Q 003363 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAK 392 (826)
Q Consensus 313 lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~ 392 (826)
|++......... . ........||+++. + +....+.........+.|||||+.|++....
T Consensus 111 l~~~~~~~~~~~-~--~~~~~~~~l~~~d~-----------------~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 111 YFAGTMAEETAP-A--VLERHQGALYSLFP-----------------D-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp EEEEEEECCSBT-T--BCCTTCEEEEEECT-----------------T-SCEEEEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred EEEecCCccccc-c--cccCCCcEEEEEEC-----------------C-CCEEEEeeccccccceEEcCCCCEEEEecCC
Confidence 666553221100 0 00012346888885 3 3444444333445678999999998777654
Q ss_pred CCCCCCCCcccceEEEEeCC--CCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEE
Q 003363 393 SSVDSGAHSATDSLHRIDWP--TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 470 (826)
Q Consensus 393 ~~~~~g~~~~~~~l~~~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l 470 (826)
. ..|+++|++ ++.. . ...+ +...+... ..+..+++.+||+ |+++.... ..|
T Consensus 170 ~----------~~i~~~~~d~~~G~~---~--~~~~--~~~~~~~~-------~~p~g~~~d~~G~-lwva~~~~--~~v 222 (297)
T 3g4e_A 170 S----------YSVDAFDYDLQTGQI---S--NRRS--VYKLEKEE-------QIPDGMCIDAEGK-LWVACYNG--GRV 222 (297)
T ss_dssp G----------TEEEEEEECTTTCCE---E--EEEE--EEECCGGG-------CEEEEEEEBTTSC-EEEEEETT--TEE
T ss_pred C----------CcEEEEeccCCCCcc---c--CcEE--EEECCCCC-------CCCCeeEECCCCC-EEEEEcCC--CEE
Confidence 2 568888874 3321 0 0011 11110000 1123567889996 66654332 358
Q ss_pred EEEECCCCcEEEe-cCCCCCeeeEEEe-ecCCEEEEEEeCC
Q 003363 471 ISVNVSSGELLRI-TPAESNFSWSLLT-LDGDNIIAVSSSP 509 (826)
Q Consensus 471 ~~vdl~tg~~~~l-t~~~~~~~~~~~s-~dg~~l~~~~s~~ 509 (826)
+++|.++|+.... ...........|. ++++.|+++....
T Consensus 223 ~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 223 IRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 8899987876543 3333345556777 7788877776553
No 363
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.02 E-value=4.3e-10 Score=126.17 Aligned_cols=133 Identities=19% Similarity=0.198 Sum_probs=92.2
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cchHHHHHHHHCC-cEEEEECCCCC-CCCchhhhhc--CCC
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKSLAFLSSVG-YSLLIVNYRGS-LGFGEEALQS--LPG 645 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~~~~~~~~la~~G-~~Vl~~d~rG~-~g~G~~~~~~--~~~ 645 (826)
.|+..+ .+|.|.. ..++.|+||++|||++..... ........|+++| ++|+.+|||.. .||+...... ...
T Consensus 82 edcl~l--~v~~P~~--~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~~~~~~~~~ 157 (498)
T 2ogt_A 82 EDGLYL--NIWSPAA--DGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYA 157 (498)
T ss_dssp SCCCEE--EEEESCS--SSCCEEEEEEECCSTTTSCCTTCGGGCCHHHHHHHTCEEEEECCCCHHHHCCCCTTTTCGGGT
T ss_pred CCCcEE--EEEecCC--CCCCCcEEEEEcCCccCCCCCCCCcCCHHHHHhCCCEEEEeCCCcCchhhccCchhhcccccc
Confidence 345444 5677862 456789999999998654332 2122346677766 99999999932 1233221100 011
Q ss_pred CCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHhC--CCceeEEEecCCccc
Q 003363 646 KVGSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCN 707 (826)
Q Consensus 646 ~~~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~~ 707 (826)
..+...+.|+.++++|+.++. ..|+++|.|+|+|+||.+++.++... ..+|+++|+.+|...
T Consensus 158 ~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~ 224 (498)
T 2ogt_A 158 QAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGS 224 (498)
T ss_dssp TGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTT
T ss_pred CCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCcc
Confidence 233456899999999998862 37899999999999999998887743 468999999998654
No 364
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=99.02 E-value=2.3e-10 Score=129.87 Aligned_cols=131 Identities=21% Similarity=0.170 Sum_probs=90.8
Q ss_pred CCCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccc-hHHHHHHHH-CCcEEEEECCCC-CCCCchhhhhcCCCCC
Q 003363 571 GAQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSS-VGYSLLIVNYRG-SLGFGEEALQSLPGKV 647 (826)
Q Consensus 571 ~~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~-~~~~~~la~-~G~~Vl~~d~rG-~~g~G~~~~~~~~~~~ 647 (826)
.|+..+ .+|.|... ..++.|+||++|||++....... ......|++ .|++|+.+|||. ..||+... ..+...
T Consensus 94 edcl~l--~v~~P~~~-~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~la~~~g~vvv~~nYRlg~~Gf~~~~--~~~~~~ 168 (543)
T 2ha2_A 94 EDCLYL--NVWTPYPR-PASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALP--GSREAP 168 (543)
T ss_dssp SCCCEE--EEEEESSC-CSSCEEEEEEECCSTTTCCCTTSGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCSSCC
T ss_pred CcCCeE--EEeecCCC-CCCCCeEEEEECCCccccCCCCCCcCChHHHHhcCCEEEEEecccccccccccCC--CCCCCC
Confidence 345444 56778642 34568999999999865544321 122345654 799999999994 22332221 011223
Q ss_pred CcchHHHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHhC--CCceeEEEecCCcc
Q 003363 648 GSQDVNDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 706 (826)
Q Consensus 648 ~~~~~~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~ 706 (826)
+...+.|+.++++|+.++. ..|++||.|+|+|+||.++..++... +.+|+++|+.+|..
T Consensus 169 ~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 169 GNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp SCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 3446899999999999862 37999999999999999998877643 46899999999853
No 365
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.01 E-value=3.9e-07 Score=97.37 Aligned_cols=127 Identities=13% Similarity=0.128 Sum_probs=71.5
Q ss_pred Cceec-CCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccC
Q 003363 376 FPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 454 (826)
Q Consensus 376 ~p~~S-pDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~D 454 (826)
.+.|. +||+ ++|.+.. .+++++|..++....+. .. .+...... ..+--+ .+...+..++|
T Consensus 230 ~~~~~~~dG~-~~~vs~~-----------g~V~v~d~~~~~~~v~~-~~-~~~~~~~~-~~g~~p----~g~q~~a~~~~ 290 (386)
T 3sjl_D 230 HPAYSQKAGR-LVWPTYT-----------GKIHQIDLSSGDAKFLP-AV-EALTEAER-ADGWRP----GGWQQVAYHRA 290 (386)
T ss_dssp CCEEETTTTE-EEEEBTT-----------SEEEEEECTTSSCEECC-CE-ESSCHHHH-HTTEEE----CSSSCEEEETT
T ss_pred cceeEcCCCc-EEEEeCC-----------CEEEEEECCCCcceeec-ce-eccccccc-cccccC----CCcceeeECCC
Confidence 36774 7884 6677653 36999998775432111 00 00000000 000001 12235667899
Q ss_pred CCEEEEEEEeC-------CeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 455 GCTMLLSSIWG-------SSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 455 g~~l~~~~~~~-------~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
++++|+....+ ....++.+|+.++++.+-..-........+++|++..+++... .-..+.++|..+.
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~--~~~~VsViD~~t~ 364 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST--GDKTLYIHDAESG 364 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEET--TTTEEEEEETTTC
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcC--CCCeEEEEECCCC
Confidence 99999876532 2468999999998876433222223346889999855555443 2345888886544
No 366
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.01 E-value=2.8e-09 Score=120.80 Aligned_cols=296 Identities=10% Similarity=-0.020 Sum_probs=150.9
Q ss_pred hhcccceeEEEEEEeecCCCCcc---ceeecCCcceecccEEEEeCCC------CCeEEEEecCCCCCCeEEEEec--CC
Q 003363 120 LLANKRKKFMLSTVISKENENSV---TFQWAPFPVEMTGASAVVPSPS------GSKLLVVRNPENESPIQFELWS--QS 188 (826)
Q Consensus 120 ~~~~~~~~~l~~~~i~~~~~~~~---~lt~~~~~~~~~~~~~~~~SPd------G~~la~~~~~~~~~~~~~~i~~--~~ 188 (826)
+++......+.++++.+...... .+.... ..+...+|||+ |+.||..+.. + .+.+|+ .+
T Consensus 176 laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~-----~~V~~v~wsp~~~~~~~~~~LAs~s~D--g---tvrlWd~~~~ 245 (524)
T 2j04_B 176 FDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSF-----GEVWDLKWHEGCHAPHLVGCLSFVSQE--G---TINFLEIIDN 245 (524)
T ss_dssp ------CEEEEEEEEETTTCCEEEEEEEEECC-----CSEEEEEECSSCCCSSSSCEEEEEETT--S---CEEEEECCCC
T ss_pred hccCCCCceEEEEEccCCCCCceEEEEEEecC-----CcEEEEEECCCCCCCCCCceEEEEecC--C---eEEEEEcCCC
Confidence 34455667777777754322111 122111 45888999997 5678776654 2 345552 12
Q ss_pred cee--EEEecC------CCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCC-CCCCccCCCCCCcc--
Q 003363 189 QLE--KEFHVP------QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKG-GSSDKDCNSWKGQG-- 257 (826)
Q Consensus 189 ~~~--~~~~~~------~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 257 (826)
... ....+. .+..+ .+.+++|+|++ .||..+.+++.. .|+...... ......+...+...
T Consensus 246 ~~~~~~~~~~~~p~~~l~~h~~------~v~sv~~s~~~-~lasgs~DgtV~--lWD~~~~~~~~~~~~~H~~~V~sv~~ 316 (524)
T 2j04_B 246 ATDVHVFKMCEKPSLTLSLADS------LITTFDFLSPT-TVVCGFKNGFVA--EFDLTDPEVPSFYDQVHDSYILSVST 316 (524)
T ss_dssp SSSSSEEECCCSCSEEECCTTT------CEEEEEESSSS-EEEEEETTSEEE--EEETTBCSSCSEEEECSSSCEEEEEE
T ss_pred ccccccceeecCceEEEEcCCC------CEEEEEecCCC-eEEEEeCCCEEE--EEECCCCCCceEEeecccccEEEEEE
Confidence 110 000000 11112 33799999975 688877776544 333221111 11123445555555
Q ss_pred eeecCC-CccCCCccCceEEEEEccCCceEe-ccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCC
Q 003363 258 DWEEDW-GETYAGKRQPSLFVININSGEVQA-VKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 335 (826)
Q Consensus 258 ~~~~d~-g~~~~~~~~~~l~v~d~~~g~~~~-l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~ 335 (826)
.|.++. ....++..+..|.+||+.+++... +.+......+..++|+|||+. ++..+ ...
T Consensus 317 ~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~----l~s~~---------------~d~ 377 (524)
T 2j04_B 317 AYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS----YIYSD---------------GAS 377 (524)
T ss_dssp ECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE----EEEEC---------------SSS
T ss_pred EcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCe----EEEeC---------------CCC
Confidence 456663 223556667899999998765322 211111123567899999997 76655 223
Q ss_pred ceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCC
Q 003363 336 ALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (826)
Q Consensus 336 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~ 414 (826)
.|.++|+ ..+. ...+..+...+...+|||||+.|+-.+.+ ..|.+||+..+
T Consensus 378 tv~lwd~-----------------~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~D-----------gtv~lwd~~~~ 429 (524)
T 2j04_B 378 SLRAVPS-----------------RAAFAVHPLVSRETTITAIGVSRLHPMVLAGSAD-----------GSLIITNAARR 429 (524)
T ss_dssp EEEEEET-----------------TCTTCCEEEEECSSCEEEEECCSSCCBCEEEETT-----------TEEECCBSCSS
T ss_pred cEEEEEC-----------------cccccceeeecCCCceEEEEeCCCCCeEEEEECC-----------CEEEEEechHh
Confidence 5788887 3443 46677777888999999999988766544 45788886543
Q ss_pred CCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEE
Q 003363 415 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSL 494 (826)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~ 494 (826)
-........ .... ...+..++|+|||+.+-+ .+...++.++..+.....+......+....
T Consensus 430 ~~~~~~~~~-~~~~--------------~~~v~~v~~sp~g~~~~~----~~~~~~~~~~~~g~~~~~l~gh~~~V~~Va 490 (524)
T 2j04_B 430 LLHGIKNSS-ATQK--------------SLRLWKWDYSIKDDKYRI----DSSYEVYPLTVNDVSKAKIDAHGINITCTK 490 (524)
T ss_dssp TTTCC-------CC--------------CCEEEECBCCSSSCEEEE----CCCCCCCC-------------CCCSCCCEE
T ss_pred hccccccCc-ccee--------------eeEEEEeccCCCCCeEEc----cCCceecccccCCcceeeecCCCceEEEEE
Confidence 111100000 0000 001125678999984422 122233333332333445555545566678
Q ss_pred EeecCC
Q 003363 495 LTLDGD 500 (826)
Q Consensus 495 ~s~dg~ 500 (826)
|+|++.
T Consensus 491 fsp~~~ 496 (524)
T 2j04_B 491 WNETSA 496 (524)
T ss_dssp ECCSTT
T ss_pred CCCCCC
Confidence 999874
No 367
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.00 E-value=8.8e-09 Score=113.82 Aligned_cols=264 Identities=15% Similarity=0.089 Sum_probs=149.1
Q ss_pred eEEEEEEeecCCCCccc-eeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCcccccc
Q 003363 127 KFMLSTVISKENENSVT-FQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVY 205 (826)
Q Consensus 127 ~~l~~~~i~~~~~~~~~-lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~ 205 (826)
..+++|++.+ ++..+ ++...- ...+...+|||||++||.....+ .+.+|+-...+.+.... +..+
T Consensus 125 ~tV~lWd~~t--g~~~~~~~~~~~---~~~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~~-~h~~--- 190 (420)
T 4gga_A 125 NSVYLWSASS--GDILQLLQMEQP---GEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMT-SHSA--- 190 (420)
T ss_dssp TEEEEEETTT--CCEEEEEECCST---TCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEEC-CCSS---
T ss_pred CEEEEEECCC--CCEEEEEEecCC---CCcEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEEEe-CCCC---
Confidence 4677777532 23322 222210 13489999999999999876543 46777322222222221 2211
Q ss_pred CCCcccceeecCCCCeEEEEeecCCCCCCCccCCCC-CCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCc
Q 003363 206 ADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE 284 (826)
Q Consensus 206 ~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~ 284 (826)
...++++|++.|+..+.+..... |+.... ........+........|.++.....++..+..+.+||..+++
T Consensus 191 -----~v~~~s~~~~~l~sgs~d~~i~~--~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 191 -----RVGSLSWNSYILSSGSRSGHIHH--HDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp -----CEEEEEEETTEEEEEETTSEEEE--EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred -----ceEEEeeCCCEEEEEeCCCceeE--eeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 23345567777777665543221 111000 0001112233333344566664444455567889999998775
Q ss_pred eEec--c-CCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCC
Q 003363 285 VQAV--K-GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED 361 (826)
Q Consensus 285 ~~~l--~-~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 361 (826)
.... . .......+..++|+|++.. ++.++.. ..+..|..+|+ .+
T Consensus 264 ~~~~~~~~~~~~~~~V~~~~~~p~~~~----~la~~~g------------s~D~~I~iwd~-----------------~t 310 (420)
T 4gga_A 264 GGWVPLQTFTQHQGAVKAVAWCPWQSN----VLATGGG------------TSDRHIRIWNV-----------------CS 310 (420)
T ss_dssp SCSCCSEEECCCSSCEEEEEECTTCTT----EEEEEEC------------TTTCEEEEEET-----------------TT
T ss_pred ccceeeeeecccCCceeeeeeCCCccc----EEEEEee------------cCCCEEEEEeC-----------------Cc
Confidence 3211 0 0233446778899999998 8776421 12346888998 56
Q ss_pred CcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCccc
Q 003363 362 LPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 441 (826)
Q Consensus 362 ~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~ 441 (826)
+...........+....|+|+++.|+..+... ...|++||+.++.......+
T Consensus 311 ~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~---------d~~I~iwd~~~~~~v~~l~g------------------- 362 (420)
T 4gga_A 311 GACLSAVDAHSQVCSILWSPHYKELISGHGFA---------QNQLVIWKYPTMAKVAELKG------------------- 362 (420)
T ss_dssp TEEEEEEECSSCEEEEEEETTTTEEEEEECTT---------TCCEEEEETTTCCEEEEECC-------------------
T ss_pred cccceeeccccceeeeeecCCCCeEEEEEecC---------CCEEEEEECCCCcEEEEEcC-------------------
Confidence 65544444445677889999999998776432 25699999987654211111
Q ss_pred ccCCCCCCccccCCCEEEEEEEeCCeEEEEEE
Q 003363 442 YSSSILSNPWLSDGCTMLLSSIWGSSQVIISV 473 (826)
Q Consensus 442 ~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~v 473 (826)
+...+..++|+|||+.| ++...++...||.+
T Consensus 363 H~~~V~~l~~spdg~~l-~S~s~D~tvriWdv 393 (420)
T 4gga_A 363 HTSRVLSLTMSPDGATV-ASAAADETLRLWRC 393 (420)
T ss_dssp CSSCEEEEEECTTSSCE-EEEETTTEEEEECC
T ss_pred CCCCEEEEEEcCCCCEE-EEEecCCeEEEEEC
Confidence 12245577899999865 55555666666644
No 368
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.00 E-value=2.4e-08 Score=107.23 Aligned_cols=110 Identities=15% Similarity=0.227 Sum_probs=75.2
Q ss_pred cccEEEEeCCC---CCeEEEEecCCCCCCeEEEEec--C-Ccee-EEEecCCCccccccCCCcccceeecCCCCeEEEEe
Q 003363 154 TGASAVVPSPS---GSKLLVVRNPENESPIQFELWS--Q-SQLE-KEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVA 226 (826)
Q Consensus 154 ~~~~~~~~SPd---G~~la~~~~~~~~~~~~~~i~~--~-~~~~-~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~ 226 (826)
..+...+|||| |++|+.....+ .+.+|+ . +... .... ...+.| ..+.|+|||+.|+..+
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~---~h~~~v------~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWAN-----DVRCWEVQDSGQTIPKAQQ---MHTGPV------LDVCWSDDGSKVFTAS 105 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTS-----EEEEEEECTTSCEEEEEEE---ECSSCE------EEEEECTTSSEEEEEE
T ss_pred CceEEEEEcCCCCCceEEEEECCCC-----cEEEEEcCCCCceeEEEec---cccCCE------EEEEECcCCCEEEEEc
Confidence 46899999999 68888766543 455662 1 3222 2222 122222 7999999999998764
Q ss_pred ecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEE--ee
Q 003363 227 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVW--AP 304 (826)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~w--SP 304 (826)
.+ ..|.+||+.+++...+ ......+..+.| +|
T Consensus 106 ~d--------------------------------------------g~v~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~ 139 (368)
T 3mmy_A 106 CD--------------------------------------------KTAKMWDLSSNQAIQI--AQHDAPVKTIHWIKAP 139 (368)
T ss_dssp TT--------------------------------------------SEEEEEETTTTEEEEE--EECSSCEEEEEEEECS
T ss_pred CC--------------------------------------------CcEEEEEcCCCCceee--ccccCceEEEEEEeCC
Confidence 32 5799999999988776 445556788999 88
Q ss_pred CCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEc
Q 003363 305 LNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRV 342 (826)
Q Consensus 305 Dg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~ 342 (826)
|++. |+..+ .+..|+.+|+
T Consensus 140 ~~~~----l~~~~---------------~dg~i~vwd~ 158 (368)
T 3mmy_A 140 NYSC----VMTGS---------------WDKTLKFWDT 158 (368)
T ss_dssp SCEE----EEEEE---------------TTSEEEEECS
T ss_pred CCCE----EEEcc---------------CCCcEEEEEC
Confidence 8886 66655 2336778887
No 369
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=98.99 E-value=1.8e-10 Score=126.99 Aligned_cols=112 Identities=12% Similarity=0.027 Sum_probs=81.5
Q ss_pred CCCcEEEEEcCCCCCCCCccchH-HHHHHHH-CCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 667 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~-~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 667 (826)
...|+||++||.+... ...|.. .+..|++ .||.|+++|+||.+...... . ... -....+|+.++++++.++..
T Consensus 68 ~~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~~~--~-~~~-~~~~~~dl~~~i~~l~~~~g 142 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQYSQ--A-SQN-IRVVGAEVAYLVQVLSTSLN 142 (432)
T ss_dssp TTSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCHHH--H-HHH-HHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECccccCccchh--h-Hhh-HHHHHHHHHHHHHHHHHhcC
Confidence 4568999999976553 235655 6667765 79999999999844322110 0 000 01124678888888876544
Q ss_pred CCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCcc
Q 003363 668 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (826)
Q Consensus 668 ~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 706 (826)
++.+++.|+|||+||.+++.++.++|++++++++.+|..
T Consensus 143 ~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 143 YAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 677899999999999999999999999999999888754
No 370
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.98 E-value=9.2e-08 Score=101.50 Aligned_cols=200 Identities=13% Similarity=0.106 Sum_probs=117.6
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe---cCCceeEEEecCCCccccccCCCcccceeecC--CCCeEEEEeec
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW---SQSQLEKEFHVPQTVHGSVYADGWFEGISWNS--DETLIAYVAEE 228 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~---~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSP--Dg~~ia~~~~~ 228 (826)
..+...+|||||++||.....+ .+.+| ......+....-....+.| ..++|+| |++.|+..+.+
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~v------~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQ-----HIKVFKLDKDTSNWELSDSWRAHDSSI------VAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----EEEEEEECSSSCCEEEEEEEECCSSCE------EEEEECCGGGCSEEEEEETT
T ss_pred cceeEEEEcCCCCEEEEeeCCC-----eEEEEECCCCCCcceecceeccCCCcE------EEEEEcCCCCCCEEEEEcCC
Confidence 4588999999999998876543 45556 2222212221111222333 7999999 69988876543
Q ss_pred CCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCc----------eEeccCCCCCCccc
Q 003363 229 PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE----------VQAVKGIPKSLSVG 298 (826)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~----------~~~l~~~~~~~~~~ 298 (826)
..|.+||+.+++ ...+ ......+.
T Consensus 81 --------------------------------------------g~v~vwd~~~~~~~~~~~~~~~~~~~--~~~~~~v~ 114 (351)
T 3f3f_A 81 --------------------------------------------KTVKLWEEDPDQEECSGRRWNKLCTL--NDSKGSLY 114 (351)
T ss_dssp --------------------------------------------SCEEEEEECTTSCTTSSCSEEEEEEE--CCCSSCEE
T ss_pred --------------------------------------------CeEEEEecCCCcccccccCcceeeee--cccCCcee
Confidence 468889988763 2333 23445678
Q ss_pred eEEEeeC--CCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceec--------
Q 003363 299 QVVWAPL--NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNL-------- 367 (826)
Q Consensus 299 ~~~wSPD--g~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~L-------- 367 (826)
.++|+|+ ++. |+..+ .+..|+++|+. +++ ...+
T Consensus 115 ~~~~~~~~~~~~----l~~~~---------------~dg~v~iwd~~-----------------~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 115 SVKFAPAHLGLK----LACLG---------------NDGILRLYDAL-----------------EPSDLRSWTLTSEMKV 158 (351)
T ss_dssp EEEECCGGGCSE----EEEEE---------------TTCEEEEEECS-----------------STTCTTCCEEEEEEES
T ss_pred EEEEcCCCCCcE----EEEec---------------CCCcEEEecCC-----------------ChHHhccccccccccc
Confidence 8999999 886 66655 33468888873 221 1111
Q ss_pred -----CCCCccccCceecCC---CCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCc
Q 003363 368 -----TESISSAFFPRFSPD---GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 439 (826)
Q Consensus 368 -----t~~~~~~~~p~~SpD---G~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 439 (826)
..+........|+|+ ++.|+..+.+. .+..++...+.... +.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~--------~~~~~~------- 212 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ-----------AIIYQRGKDGKLHV--------AAKLPG------- 212 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE-----------EEEEEECTTSCEEE--------EEECCC-------
T ss_pred cccccCCcccceeEEEeccCCCCCcEEEEecCCC-----------cEEEEccCCCceee--------eeecCC-------
Confidence 123445778899998 88777666442 24444433322110 000000
Q ss_pred ccccCCCCCCccccCCC---EEEEEEEeCCeEEEEEEE
Q 003363 440 GLYSSSILSNPWLSDGC---TMLLSSIWGSSQVIISVN 474 (826)
Q Consensus 440 g~~~~~~~~~~ws~Dg~---~l~~~~~~~~~~~l~~vd 474 (826)
+...+..+.|+|++. .++++...++...+|.++
T Consensus 213 --h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 213 --HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp --CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred --CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 112345678999983 466676667777777665
No 371
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.98 E-value=1.5e-08 Score=120.92 Aligned_cols=235 Identities=12% Similarity=0.129 Sum_probs=141.5
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCC--CCeEEEEeecC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEP 229 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPD--g~~ia~~~~~~ 229 (826)
..+...+|||||++|+.....+ .+.+|+ ++....+..+ .+..+.| ..+.|+|+ |+.|+..+.+
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg-----~I~vwd~~~~~~~~~~~l-~~h~~~V------~~l~~s~~~~~~~l~s~s~D- 76 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDK-----TIKIFEVEGETHKLIDTL-TGHEGPV------WRVDWAHPKFGTILASCSYD- 76 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTT-----EEEEEEEETTEEEEEEEE-CCCSSCE------EEEEECCTTSCSEEEEEETT-
T ss_pred ceeEEEEECCCCCeEEEEECCC-----cEEEEecCCCCCccceec-cCCcCce------EEEEecCCCCCCEEEEEeCC-
Confidence 4588999999999998876543 456662 2222222222 2333344 89999999 8888887543
Q ss_pred CCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEecc-CCCCCCccceEEEeeC--C
Q 003363 230 SPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPL--N 306 (826)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~-~~~~~~~~~~~~wSPD--g 306 (826)
..|.+||+.+++...+. -......+..++|+|+ |
T Consensus 77 -------------------------------------------g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~ 113 (753)
T 3jro_A 77 -------------------------------------------GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG 113 (753)
T ss_dssp -------------------------------------------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC
T ss_pred -------------------------------------------CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCC
Confidence 56999999988632221 0334457889999999 7
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecC-----
Q 003363 307 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSP----- 381 (826)
Q Consensus 307 ~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~Sp----- 381 (826)
+. ++..+ .+..|..+|+... .......+..+...+....|+|
T Consensus 114 ~~----l~sgs---------------~dg~I~vwdl~~~--------------~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 114 PL----LLVAS---------------SDGKVSVVEFKEN--------------GTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp SE----EEEEE---------------TTSEEEEEECCSS--------------SCCCCEEEECCSSCEEEEEECCCC---
T ss_pred CE----EEEEe---------------CCCcEEEEEeecC--------------CCcceeEeecCCCceEEEEecCccccc
Confidence 76 66655 3347888887210 1113344556666788899999
Q ss_pred --------CCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCcccc
Q 003363 382 --------DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 453 (826)
Q Consensus 382 --------DG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~ 453 (826)
||+.|+..+.+ ..|++||+.++.... ........ +...+..+.|+|
T Consensus 161 ~~~~~~~~d~~~l~sgs~d-----------g~I~iwd~~~~~~~~------~~~~~~~~---------h~~~V~~l~~sp 214 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGAD-----------NLVKIWKYNSDAQTY------VLESTLEG---------HSDWVRDVAWSP 214 (753)
T ss_dssp ------CGGGCCEEEEETT-----------SCEEEEEEETTTTEE------EEEEEECC---------CSSCEEEEEECC
T ss_pred ccccccCCCCCEEEEEECC-----------CeEEEEeccCCcccc------eeeeeecC---------CCCcEEEEEecc
Confidence 68888776654 348888887653210 01111100 112345778999
Q ss_pred C---CCEEEEEEEeCCeEEEEEEECCCCcE---EEecC---CCCCeeeEEEeecCCEEEEEE
Q 003363 454 D---GCTMLLSSIWGSSQVIISVNVSSGEL---LRITP---AESNFSWSLLTLDGDNIIAVS 506 (826)
Q Consensus 454 D---g~~l~~~~~~~~~~~l~~vdl~tg~~---~~lt~---~~~~~~~~~~s~dg~~l~~~~ 506 (826)
| |+ ++++...++...+| |+.+++. ..+.. ....+....|+++++.++...
T Consensus 215 ~~~~~~-~l~s~s~Dg~I~iw--d~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 215 TVLLRS-YLASVSQDRTCIIW--TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp CCSSSE-EEEEEESSSCEEEE--EESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC
T ss_pred CCCCCC-EEEEEecCCEEEEe--cCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc
Confidence 9 65 55666656665665 4445421 11111 222344567889888665543
No 372
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.97 E-value=2.8e-08 Score=104.62 Aligned_cols=239 Identities=16% Similarity=0.110 Sum_probs=138.5
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
..+...+|+|+|++||..+..+ .+.+|+ .++..+....... ....++++++.|+..+.+...
T Consensus 68 ~~V~~v~~~~~~~~l~sgs~Dg-----~v~iw~~~~~~~~~~~~~h~~-----------~~~~~~~~~~~l~s~~~~~~~ 131 (318)
T 4ggc_A 68 EYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMTSHSA-----------RVGSLSWNSYILSSGSRSGHI 131 (318)
T ss_dssp CCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSS-----------CEEEEEEETTEEEEEETTSEE
T ss_pred CeEEEEEECCCCCEEEEEECCC-----cEEEeecCCceeEEEecCccc-----------eEEEeecCCCEEEEEecCCce
Confidence 3488999999999999876543 567783 3333333221111 345677888877776554422
Q ss_pred CCCCccCCCC-CCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEecc---CCCCCCccceEEEeeCCC
Q 003363 232 SKPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK---GIPKSLSVGQVVWAPLNE 307 (826)
Q Consensus 232 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~---~~~~~~~~~~~~wSPDg~ 307 (826)
.. +..... ........+........+.++....+++..+..|.+||+.+++..... .......+....|+|++.
T Consensus 132 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 209 (318)
T 4ggc_A 132 HH--HDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS 209 (318)
T ss_dssp EE--EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTST
T ss_pred Ee--eecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCC
Confidence 11 110000 000111122333334445555334445556788999999877532210 022233567889999999
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEE
Q 003363 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLV 387 (826)
Q Consensus 308 ~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~ 387 (826)
. ++..... .....|.++|. ...................|+|+++.++
T Consensus 210 ~----~~~~~~~------------~~~~~i~lwd~-----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 256 (318)
T 4ggc_A 210 N----VLATGGG------------TSDRHIRIWNV-----------------CSGACLSAVDAHSQVCSILWSPHYKELI 256 (318)
T ss_dssp T----EEEEEEC------------TTTCEEEEEET-----------------TTCCEEEEEECSSCEEEEEEETTTTEEE
T ss_pred c----EEEEEec------------CCCCEEEEEec-----------------ccccccccccceeeeeeeeecccccceE
Confidence 8 8765422 12336777887 4444444444555677889999999998
Q ss_pred EEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCe
Q 003363 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 467 (826)
Q Consensus 388 f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~ 467 (826)
..+... ...|++||+.+++......+ +...+..++|+|||+.| ++...++.
T Consensus 257 ~~sg~~---------d~~i~iwd~~~~~~~~~l~g-------------------H~~~V~~l~~spdg~~l-~S~s~D~~ 307 (318)
T 4ggc_A 257 SGHGFA---------QNQLVIWKYPTMAKVAELKG-------------------HTSRVLSLTMSPDGATV-ASAAADET 307 (318)
T ss_dssp EEECTT---------TCCEEEEETTTCCEEEEECC-------------------CSSCEEEEEECTTSSCE-EEEETTTE
T ss_pred EEEEcC---------CCEEEEEECCCCcEEEEEcC-------------------CCCCEEEEEEcCCCCEE-EEEecCCe
Confidence 776432 25699999987654221111 11234577899999855 56666666
Q ss_pred EEEEE
Q 003363 468 QVIIS 472 (826)
Q Consensus 468 ~~l~~ 472 (826)
..||.
T Consensus 308 v~iWd 312 (318)
T 4ggc_A 308 LRLWR 312 (318)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 66663
No 373
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.97 E-value=4.1e-08 Score=105.76 Aligned_cols=249 Identities=8% Similarity=0.028 Sum_probs=122.1
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEec-CCCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
..+...+|||||+.||...+.. +.+|+.......... ..+. ..+.|+++++.++.++.... .
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~------~~iw~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~d~-~ 82 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKS------FEIYNVHPVAHIMSQEMRHL----------SKVRMLHRTNYVAFVTGVKE-V 82 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSE------EEEEEETTEEEEEEEECSCC----------CEEEECTTSSEEEEECSSTT-E
T ss_pred CceEEEEECCCCCEEEEEcCCE------EEEEecCCcceeeeeecCCe----------EEEEEcCCCCEEEEEECCcc-E
Confidence 4588999999999998754332 457732222222211 1122 67889999998887654321 1
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCC-ceEeccCCCCCCccceEEEeeCCCCCcc
Q 003363 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-EVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g-~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (826)
...|+.......... ..........+.++. +.......|++||+.++ +.... ... ..+..+++| +.
T Consensus 83 v~iWd~~~~~~~~~~-~~~~~v~~v~~~~~~---~~~~~~~~i~i~d~~~~~~~~~~--~~~--~~~~~~~s~--~~--- 149 (355)
T 3vu4_A 83 VHIWDDVKKQDVSRI-KVDAPVKDLFLSREF---IVVSYGDVISVFKFGNPWKRITD--DIR--FGGVCEFSN--GL--- 149 (355)
T ss_dssp EEEEETTTTEEEEEE-ECSSCEEEEEECSSE---EEEEETTEEEEEESSTTCCBSSC--CEE--EEEEEEEET--TE---
T ss_pred EEEEECCCCcEEEEE-ECCCceEEEEEcCCE---EEEEEcCEEEEEECCCCceeeEE--ecc--CCceEEEEc--cE---
Confidence 112221111110000 011111122233221 11112355777777665 22211 111 333445666 33
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEe
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLS 390 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s 390 (826)
+++.+. .....|.++|+............. ....-.. ...+..+...+...+|||||++|+..+
T Consensus 150 -la~~sg-------------~~~g~v~iwd~~~~~~~~~~~~~~-~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s 214 (355)
T 3vu4_A 150 -LVYSNE-------------FNLGQIHITKLQSSGSATTQDQGV-QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS 214 (355)
T ss_dssp -EEEEES-------------SCTTCEEEEECCC-------------------CCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred -EEEeCC-------------CcCcEEEEEECCCCCccccccccc-cccccCcccEEEEccCCceEEEEECCCCCEEEEEe
Confidence 555521 133468888873110000000000 0000001 566777788899999999999988766
Q ss_pred ccCCCCCCCCcccce-EEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEE
Q 003363 391 AKSSVDSGAHSATDS-LHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 469 (826)
Q Consensus 391 ~~~~~~~g~~~~~~~-l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~ 469 (826)
.+ .. |.+||+.+++..... .. |.+...+..++|+|||+.|+ +...++...
T Consensus 215 ~d-----------~~~v~iwd~~~~~~~~~~----------~~-------g~h~~~v~~~~~s~~~~~l~-s~s~d~~v~ 265 (355)
T 3vu4_A 215 QD-----------GTIIRVFKTEDGVLVREF----------RR-------GLDRADVVDMKWSTDGSKLA-VVSDKWTLH 265 (355)
T ss_dssp TT-----------CSEEEEEETTTCCEEEEE----------EC-------TTCCSCEEEEEECTTSCEEE-EEETTCEEE
T ss_pred CC-----------CCEEEEEECCCCcEEEEE----------Ec-------CCCCCcEEEEEECCCCCEEE-EEECCCEEE
Confidence 54 44 889998876542111 00 00112345778999998664 444455555
Q ss_pred EEEEECCCC
Q 003363 470 IISVNVSSG 478 (826)
Q Consensus 470 l~~vdl~tg 478 (826)
+| |+..+
T Consensus 266 iw--~~~~~ 272 (355)
T 3vu4_A 266 VF--EIFND 272 (355)
T ss_dssp EE--ESSCC
T ss_pred EE--EccCC
Confidence 55 55443
No 374
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.97 E-value=1.3e-07 Score=100.48 Aligned_cols=235 Identities=14% Similarity=0.102 Sum_probs=135.5
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 003363 156 ASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (826)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~ 234 (826)
...|+|+||++.++++...+ .+++.++ .+++. +.+.....+ ..+.|+|||+.++.. .
T Consensus 51 ~egp~~~~~~~~l~~~d~~~---~~i~~~d~~~~~~-~~~~~~~~v----------~~i~~~~dg~l~v~~--~------ 108 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILE---RELHELHLASGRK-TVHALPFMG----------SALAKISDSKQLIAS--D------ 108 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGG---TEEEEEETTTTEE-EEEECSSCE----------EEEEEEETTEEEEEE--T------
T ss_pred CcCCeEeCCCCEEEEEECCC---CEEEEEECCCCcE-EEEECCCcc----------eEEEEeCCCeEEEEE--C------
Confidence 45789999999998886432 3577777 34433 333333333 688999999865542 1
Q ss_pred CccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCC---CCccceEEEeeCCCCCcc
Q 003363 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPK---SLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~---~~~~~~~~wSPDg~~~~~ 311 (826)
..|+++|.++++.+.+..... ...+..+.++|||+
T Consensus 109 --------------------------------------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~---- 146 (326)
T 2ghs_A 109 --------------------------------------DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA---- 146 (326)
T ss_dssp --------------------------------------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC----
T ss_pred --------------------------------------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC----
Confidence 249999999998876632211 12456789999997
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEec
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 391 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~ 391 (826)
|++....... ......||+++ + ++.+.+.........+.|||||+.|++...
T Consensus 147 -l~v~~~~~~~--------~~~~~~l~~~~-~------------------g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 147 -LWIGTMGRKA--------ETGAGSIYHVA-K------------------GKVTKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp -EEEEEEETTC--------CTTCEEEEEEE-T------------------TEEEEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred -EEEEeCCCcC--------CCCceEEEEEe-C------------------CcEEEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 6665422110 01234688887 2 223333332233457899999999887654
Q ss_pred cCCCCCCCCcccceEEEEeCC--CC-CCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeE
Q 003363 392 KSSVDSGAHSATDSLHRIDWP--TN-GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQ 468 (826)
Q Consensus 392 ~~~~~~g~~~~~~~l~~~d~~--~~-~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~ 468 (826)
. ...|+++|++ ++ .... ...+.. ...... ....+.+.+||+ |+++... ..
T Consensus 199 ~----------~~~I~~~d~~~~~Gl~~~~----~~~~~~---~~~~~~-------~p~gi~~d~~G~-lwva~~~--~~ 251 (326)
T 2ghs_A 199 K----------VNRLMRVPLDARTGLPTGK----AEVFID---STGIKG-------GMDGSVCDAEGH-IWNARWG--EG 251 (326)
T ss_dssp T----------TCEEEEEEBCTTTCCBSSC----CEEEEE---CTTSSS-------EEEEEEECTTSC-EEEEEET--TT
T ss_pred C----------CCEEEEEEcccccCCcccC----ceEEEE---CCCCCC-------CCCeeEECCCCC-EEEEEeC--CC
Confidence 3 2579999986 43 2110 000101 000000 122466788886 6555432 23
Q ss_pred EEEEEECCCCcEEEecCCCCCeeeEEEe-ecCCEEEEEEeCC
Q 003363 469 VIISVNVSSGELLRITPAESNFSWSLLT-LDGDNIIAVSSSP 509 (826)
Q Consensus 469 ~l~~vdl~tg~~~~lt~~~~~~~~~~~s-~dg~~l~~~~s~~ 509 (826)
.|+++|.++..+..+...........|+ ++++.|++.....
T Consensus 252 ~v~~~d~~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 252 AVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EEEEECCCCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 6888898544455555443344555676 6777776665443
No 375
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.96 E-value=2.6e-08 Score=107.04 Aligned_cols=268 Identities=10% Similarity=-0.013 Sum_probs=141.3
Q ss_pred CCCC---cceEEEEEeechhhcccceeEEEEEEeecCCCCc-cceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCC
Q 003363 104 GNGN---GTQAMFSISQPNLLANKRKKFMLSTVISKENENS-VTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESP 179 (826)
Q Consensus 104 ~s~d---g~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~-~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~ 179 (826)
++|| |+.++... ....+.++++...+... ..+.... ..+...+|+|||++|+.....+
T Consensus 47 ~~~~~~~g~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~~dg---- 108 (368)
T 3mmy_A 47 FSPPTLPGNFLIAGS---------WANDVRCWEVQDSGQTIPKAQQMHT-----GPVLDVCWSDDGSKVFTASCDK---- 108 (368)
T ss_dssp ECCTTSSSEEEEEEE---------TTSEEEEEEECTTSCEEEEEEEECS-----SCEEEEEECTTSSEEEEEETTS----
T ss_pred EcCCCCCceEEEEEC---------CCCcEEEEEcCCCCceeEEEecccc-----CCEEEEEECcCCCEEEEEcCCC----
Confidence 4777 57665432 23456777775433322 2333333 4688999999999999876543
Q ss_pred eEEEEe--cCCceeEEEecCCCccccccCCCcccceee--cCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCC
Q 003363 180 IQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISW--NSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKG 255 (826)
Q Consensus 180 ~~~~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~w--SPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (826)
.+.+| ..++..+.......+ ..+.| +||++.|+..+.+.... .|+............. ....
T Consensus 109 -~v~iwd~~~~~~~~~~~~~~~v----------~~~~~~~~~~~~~l~~~~~dg~i~--vwd~~~~~~~~~~~~~-~~~~ 174 (368)
T 3mmy_A 109 -TAKMWDLSSNQAIQIAQHDAPV----------KTIHWIKAPNYSCVMTGSWDKTLK--FWDTRSSNPMMVLQLP-ERCY 174 (368)
T ss_dssp -EEEEEETTTTEEEEEEECSSCE----------EEEEEEECSSCEEEEEEETTSEEE--EECSSCSSCSEEEECS-SCEE
T ss_pred -cEEEEEcCCCCceeeccccCce----------EEEEEEeCCCCCEEEEccCCCcEE--EEECCCCcEEEEEecC-CCce
Confidence 56677 344444433322233 78999 99999998887765433 2222111111111100 0000
Q ss_pred cceeecCCCccCCCccCceEEEEEccCCceEecc-CCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCC
Q 003363 256 QGDWEEDWGETYAGKRQPSLFVININSGEVQAVK-GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRP 334 (826)
Q Consensus 256 ~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~-~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~ 334 (826)
...+.. ...+.......+.+|++......... ............+.+++......++..+ .+
T Consensus 175 ~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~d 237 (368)
T 3mmy_A 175 CADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS---------------IE 237 (368)
T ss_dssp EEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE---------------TT
T ss_pred EEEecC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec---------------CC
Confidence 111111 12233345567888888765432221 1222234445566666654222233332 33
Q ss_pred CceEEEEcccccchhhhhhhhcCCCCCCcceecCCCC------------ccccCceecCCCCEEEEEeccCCCCCCCCcc
Q 003363 335 CALYAVRVSLYKSEASELELKESSSEDLPVVNLTESI------------SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSA 402 (826)
Q Consensus 335 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~------------~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~ 402 (826)
..|.++|+..... ......+..+. ..+....|||||++|+..+.+
T Consensus 238 g~i~i~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d---------- 294 (368)
T 3mmy_A 238 GRVAIHYINPPNP-------------AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSD---------- 294 (368)
T ss_dssp SEEEEEESSCSCH-------------HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETT----------
T ss_pred CcEEEEecCCCCc-------------cccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccC----------
Confidence 4677777631100 01112222222 147788999999998876654
Q ss_pred cceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEE
Q 003363 403 TDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSI 463 (826)
Q Consensus 403 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~ 463 (826)
..|++||+.++........ +...+..++|+|||+.|+..+.
T Consensus 295 -g~i~iwd~~~~~~~~~~~~-------------------~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 295 -GRFSFWDKDARTKLKTSEQ-------------------LDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp -SCEEEEETTTTEEEEECCC-------------------CSSCEEEEEECTTSSCEEEEEC
T ss_pred -CeEEEEECCCCcEEEEecC-------------------CCCCceEEEECCCCCeEEEEec
Confidence 3589999887543211110 1123457789999997776654
No 376
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.95 E-value=4.6e-07 Score=103.18 Aligned_cols=334 Identities=7% Similarity=-0.059 Sum_probs=164.9
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCcc-ceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEE
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSV-TFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQF 182 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~-~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~ 182 (826)
++.|.....|..... ...+++++. ...+.. .+... .....+++||||++++..... + .+.
T Consensus 161 ~~~d~~~~~~V~~~~-------~~~V~viD~--~t~~v~~~i~~g------~~p~~v~~SpDGr~lyv~~~d--g--~V~ 221 (567)
T 1qks_A 161 NDWDLENLFSVTLRD-------AGQIALIDG--STYEIKTVLDTG------YAVHISRLSASGRYLFVIGRD--G--KVN 221 (567)
T ss_dssp SCCCGGGEEEEEETT-------TTEEEEEET--TTCCEEEEEECS------SCEEEEEECTTSCEEEEEETT--S--EEE
T ss_pred cccCCCceEEEEeCC-------CCeEEEEEC--CCCeEEEEEeCC------CCccceEECCCCCEEEEEcCC--C--eEE
Confidence 455655566655432 335666554 333322 22222 134578999999998765432 2 455
Q ss_pred EEec---CCceeEEEecCCCccccccCCCcccceeec----CCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCC----
Q 003363 183 ELWS---QSQLEKEFHVPQTVHGSVYADGWFEGISWN----SDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCN---- 251 (826)
Q Consensus 183 ~i~~---~~~~~~~~~~~~~~~g~v~~~~~~~~~~wS----PDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 251 (826)
.++. ..+....+...... ..+.+| |||++++...+.+... ..++....+..+...-..
T Consensus 222 viD~~~~t~~~v~~i~~G~~P----------~~ia~s~~~~pDGk~l~v~n~~~~~v-~ViD~~t~~~~~~i~~~~~~~~ 290 (567)
T 1qks_A 222 MIDLWMKEPTTVAEIKIGSEA----------RSIETSKMEGWEDKYAIAGAYWPPQY-VIMDGETLEPKKIQSTRGMTYD 290 (567)
T ss_dssp EEETTSSSCCEEEEEECCSEE----------EEEEECCSTTCTTTEEEEEEEETTEE-EEEETTTCCEEEEEECCEECTT
T ss_pred EEECCCCCCcEeEEEecCCCC----------ceeEEccccCCCCCEEEEEEccCCeE-EEEECCCCcEEEEEeccccccc
Confidence 5553 34444444433333 588999 7999888766543211 111211111000000000
Q ss_pred ------C-CCCcceeecCCCcc-CCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcce
Q 003363 252 ------S-WKGQGDWEEDWGET-YAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETR 323 (826)
Q Consensus 252 ------~-~~~~~~~~~d~g~~-~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~ 323 (826)
. -......+++..+. +..+....|+++|..+.+...++.+........+.|+|||++ ++....
T Consensus 291 ~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~----~~va~~----- 361 (567)
T 1qks_A 291 EQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRY----FITAAN----- 361 (567)
T ss_dssp TCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCE----EEEEEG-----
T ss_pred cccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCE----EEEEeC-----
Confidence 0 00011112221111 111223556666655432211111112223446789999996 655542
Q ss_pred eeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCC----CccccCce-ecCCCCEEEEEeccCCCCCC
Q 003363 324 KLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES----ISSAFFPR-FSPDGKFLVFLSAKSSVDSG 398 (826)
Q Consensus 324 ~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~----~~~~~~p~-~SpDG~~l~f~s~~~~~~~g 398 (826)
....|..+|+ .+++......- ......+. +.|||..++.+++-.
T Consensus 362 ---------~sn~V~ViD~-----------------~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g----- 410 (567)
T 1qks_A 362 ---------ARNKLVVIDT-----------------KEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG----- 410 (567)
T ss_dssp ---------GGTEEEEEET-----------------TTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS-----
T ss_pred ---------CCCeEEEEEC-----------------CCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCC-----
Confidence 2237889998 55554322211 11112334 479888775555432
Q ss_pred CCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCC----eEEEEEEE
Q 003363 399 AHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGS----SQVIISVN 474 (826)
Q Consensus 399 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~----~~~l~~vd 474 (826)
...|.++|.++++.... ...++..+..+.. +...+..+|||+++|+...... ...|..+|
T Consensus 411 ----~~~Vsvid~~~~~~~~~---~~kvv~~i~~~g~---------g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 411 ----DDSVALIGTDPEGHPDN---AWKILDSFPALGG---------GSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp ----SSEEEEEECCTTTCTTT---BTSEEEEEECSCS---------CCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEE
T ss_pred ----CCeEEEecCCCCCCccc---cCEEEEEEecCCC---------CCEEEEeCCCCCeEEEecCCCCCcccCceEEEEE
Confidence 25688999877432211 1112332222211 1123456899999987642221 34677788
Q ss_pred CCCC-----c--EEEecC--------CCCCeeeEEEeecCCEEEEEEe-CCCCCCeEEEEeeccc
Q 003363 475 VSSG-----E--LLRITP--------AESNFSWSLLTLDGDNIIAVSS-SPVDVPQVKYGYFVDK 523 (826)
Q Consensus 475 l~tg-----~--~~~lt~--------~~~~~~~~~~s~dg~~l~~~~s-~~~~p~~l~~~~~~~~ 523 (826)
+++. . .+.+.. .........|+++|++++++.- .......|.++|..+.
T Consensus 475 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 475 IKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp GGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 7765 1 134421 1223455689999999988753 3345677888885543
No 377
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.94 E-value=5.3e-08 Score=118.07 Aligned_cols=216 Identities=9% Similarity=0.084 Sum_probs=127.0
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
..+...+|||||+.||.....+ .+.+|+........... ..+.| ..++||| |++|+..+.+
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg-----~I~lw~~~~~~~~~~~~--~~~~V------~~l~fsp-g~~L~S~s~D----- 78 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTG-----EVHIYGQQQVEVVIKLE--DRSAI------KEMRFVK-GIYLVVINAK----- 78 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTS-----EEEEECSTTCEEEEECS--SCCCE------EEEEEET-TTEEEEEETT-----
T ss_pred CCcEEEEECCCCCEEEEEeCCC-----EEEEEeCCCcEEEEEcC--CCCCE------EEEEEcC-CCEEEEEECc-----
Confidence 3588999999999999876543 57778433333333222 12223 8999999 8877766432
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEE
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (826)
..|.+||+.+++.... ......+..++|+|||+. |
T Consensus 79 ---------------------------------------~~v~lWd~~~~~~~~~--~~~~~~V~~v~~sp~g~~----l 113 (902)
T 2oaj_A 79 ---------------------------------------DTVYVLSLYSQKVLTT--VFVPGKITSIDTDASLDW----M 113 (902)
T ss_dssp ---------------------------------------CEEEEEETTTCSEEEE--EECSSCEEEEECCTTCSE----E
T ss_pred ---------------------------------------CeEEEEECCCCcEEEE--EcCCCCEEEEEECCCCCE----E
Confidence 5799999998875433 223346788999999997 7
Q ss_pred EEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc------------eecCCCCccccCceecC
Q 003363 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV------------VNLTESISSAFFPRFSP 381 (826)
Q Consensus 314 vf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~------------~~Lt~~~~~~~~p~~Sp 381 (826)
+..+ .+..|.++|+ .++.. ..+..+.+.+...+|+|
T Consensus 114 ~sgs---------------~dg~V~lwd~-----------------~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 114 LIGL---------------QNGSMIVYDI-----------------DRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EEEE---------------TTSCEEEEET-----------------TTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred EEEc---------------CCCcEEEEEC-----------------CCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 6655 2346888887 33332 12344556788999999
Q ss_pred CCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCC--CCcccccCCCCCCccccCCCEEE
Q 003363 382 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD--CFPGLYSSSILSNPWLSDGCTML 459 (826)
Q Consensus 382 DG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~f~g~~~~~~~~~~ws~Dg~~l~ 459 (826)
++..++.....+ ..+ +||+.++......... ..+ -....+. .........+..++|+|||+.|+
T Consensus 162 ~~~~~l~~g~~d----------g~v-lWd~~~~~~~~~~~~~--~~~-g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la 227 (902)
T 2oaj_A 162 RDIGTVLISYEY----------VTL-TYSLVENEIKQSFIYE--LPP-FAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227 (902)
T ss_dssp TEEEEEEEECSS----------CEE-EEETTTTEEEEEECCC--BCT-TCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred CCCCEEEEEeCC----------CcE-EEECCCCceEEEEecc--cCC-cCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence 754444344332 457 9998875432110000 000 0000000 00000112355788999998654
Q ss_pred EEEEeCCeEEEEEEECCCCcEEE
Q 003363 460 LSSIWGSSQVIISVNVSSGELLR 482 (826)
Q Consensus 460 ~~~~~~~~~~l~~vdl~tg~~~~ 482 (826)
+...++. |..+|+.+|+...
T Consensus 228 -sgs~Dg~--i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 228 -TIHEDNS--LVFWDANSGHMIM 247 (902)
T ss_dssp -EEETTCC--EEEEETTTCCEEE
T ss_pred -EEECCCe--EEEEECCCCcEEE
Confidence 4444444 5556888887654
No 378
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.94 E-value=1.5e-09 Score=122.95 Aligned_cols=127 Identities=21% Similarity=0.181 Sum_probs=89.2
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccc-hHHHHHHHH-CCcEEEEECCCCC-CCCchhhhhcCCCCCCcchH
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLSS-VGYSLLIVNYRGS-LGFGEEALQSLPGKVGSQDV 652 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~-~~~~~~la~-~G~~Vl~~d~rG~-~g~G~~~~~~~~~~~~~~~~ 652 (826)
+...+|.|... .++.|+||++|||++....... ......|++ .|++|+.+|||.. .||.... ..+...+...+
T Consensus 93 l~lnv~~P~~~--~~~~Pv~v~iHGGg~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~~~~n~gl 168 (529)
T 1p0i_A 93 LYLNVWIPAPK--PKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFLALP--GNPEAPGNMGL 168 (529)
T ss_dssp CEEEEEEESSC--CSSEEEEEEECCSTTTSCCTTCGGGCTHHHHHHHCCEEEEECCCCHHHHHCCCT--TCTTSCSCHHH
T ss_pred CeEEEeeCCCC--CCCCeEEEEECCCccccCCCCccccChHHHhccCCeEEEEecccccccccccCC--CCCCCcCcccH
Confidence 34457788742 3678999999998865543321 122355655 7999999999942 1222110 01112334458
Q ss_pred HHHHHHHHHHHHc---CCCCCCcEEEEEecchHHHHHHHHHhC--CCceeEEEecCCcc
Q 003363 653 NDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 706 (826)
Q Consensus 653 ~D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~ 706 (826)
.|+.++++|+.++ ...|+++|.|+|+|+||.++..++... ..+|+++|+.+|..
T Consensus 169 ~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 227 (529)
T 1p0i_A 169 FDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSF 227 (529)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcc
Confidence 9999999999886 247999999999999999999887753 45899999999865
No 379
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.93 E-value=2.2e-10 Score=130.09 Aligned_cols=126 Identities=22% Similarity=0.228 Sum_probs=87.6
Q ss_pred EEEEEEec-----CCCCCCCC----CcEEEEEcCCCCCCCCccc-hHHHHHHHHCCcEEEEECCCCCC-CCchhhhhcCC
Q 003363 576 FEAIFVSS-----SHKKDCSC----DPLIVVLHGGPHSVSLSSY-SKSLAFLSSVGYSLLIVNYRGSL-GFGEEALQSLP 644 (826)
Q Consensus 576 l~~~~~~P-----~~~~~~~~----~P~vv~~HGg~~~~~~~~~-~~~~~~la~~G~~Vl~~d~rG~~-g~G~~~~~~~~ 644 (826)
+...+|.| ... ..++ .|+||++|||++....... ......|+++|++|+.+|||... |+..... .
T Consensus 91 L~lnv~~P~~~~~~~~-~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~l~~~g~vvv~~nYRl~~~Gf~~~~~---~ 166 (551)
T 2fj0_A 91 IHANIHVPYYALPRDA-ADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNS---T 166 (551)
T ss_dssp CEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTTCBCTTGGGGSCEEEEECCCCHHHHHCCCSS---S
T ss_pred eEEEEEecCccccccc-cccCcCCCCCEEEEEcCCccccCCCcccccCHHHHHhCCeEEEEeCCcCCccccccCcc---c
Confidence 45567778 422 2333 8999999998865443321 12345677899999999999631 2211110 1
Q ss_pred CCCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEEecchHHHHHHHHHh--CCCceeEEEecCCc
Q 003363 645 GKVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPL 705 (826)
Q Consensus 645 ~~~~~~~~~D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~p~ 705 (826)
...+...+.|+.++++|+.++ ...|+++|.|+|+|+||.+++.++.. .+.+|+++|+.+|.
T Consensus 167 ~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~ 232 (551)
T 2fj0_A 167 SVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGT 232 (551)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCC
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCC
Confidence 123345689999999999886 23799999999999999999988765 35789999999985
No 380
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.93 E-value=1.5e-07 Score=101.35 Aligned_cols=188 Identities=14% Similarity=0.125 Sum_probs=109.1
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
++....++++++.++++...+ ..+.+|+ .++..........+ ..+.|++++. +... +...
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d----~~v~iWd~~~~~~~~~~~~~~~v----------~~v~~~~~~~--~~~~-~~~i- 121 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVK----EVVHIWDDVKKQDVSRIKVDAPV----------KDLFLSREFI--VVSY-GDVI- 121 (355)
T ss_dssp CCCEEEECTTSSEEEEECSST----TEEEEEETTTTEEEEEEECSSCE----------EEEEECSSEE--EEEE-TTEE-
T ss_pred CeEEEEEcCCCCEEEEEECCc----cEEEEEECCCCcEEEEEECCCce----------EEEEEcCCEE--EEEE-cCEE-
Confidence 467788999999998775443 2577884 34444333333222 7888988753 3322 2211
Q ss_pred CCCccCCCC-CCCCCCccCCCCCCcceeecCCCccCC--CccCceEEEEEccCCc-----------------eEeccCCC
Q 003363 233 KPTFSLGST-KGGSSDKDCNSWKGQGDWEEDWGETYA--GKRQPSLFVININSGE-----------------VQAVKGIP 292 (826)
Q Consensus 233 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~g~~~~--~~~~~~l~v~d~~~g~-----------------~~~l~~~~ 292 (826)
..|+.... +....... ..+...+.+ ..... +.....|.+||+.+++ +..+ ..
T Consensus 122 -~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~--~~ 193 (355)
T 3vu4_A 122 -SVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI--KA 193 (355)
T ss_dssp -EEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEE--CC
T ss_pred -EEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE--Ec
Confidence 12221111 11111100 001111221 11111 3456789999998876 4555 34
Q ss_pred CCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCc-eEEEEcccccchhhhhhhhcCCCCCCc-ceecC-C
Q 003363 293 KSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCA-LYAVRVSLYKSEASELELKESSSEDLP-VVNLT-E 369 (826)
Q Consensus 293 ~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~-l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt-~ 369 (826)
....+..++|+|||+. |+..+ .+.. |.++|+ .+++ ...+. .
T Consensus 194 h~~~v~~~~~s~~g~~----l~s~s---------------~d~~~v~iwd~-----------------~~~~~~~~~~~g 237 (355)
T 3vu4_A 194 HTNPIKMVRLNRKSDM----VATCS---------------QDGTIIRVFKT-----------------EDGVLVREFRRG 237 (355)
T ss_dssp CSSCEEEEEECTTSSE----EEEEE---------------TTCSEEEEEET-----------------TTCCEEEEEECT
T ss_pred cCCceEEEEECCCCCE----EEEEe---------------CCCCEEEEEEC-----------------CCCcEEEEEEcC
Confidence 4557889999999997 77665 3346 888898 4444 44555 2
Q ss_pred -CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCC
Q 003363 370 -SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 370 -~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
+...+...+|||||++|+..+.+ ..|.+||+..+.
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~s~d-----------~~v~iw~~~~~~ 273 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVVSDK-----------WTLHVFEIFNDQ 273 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEEETT-----------CEEEEEESSCCS
T ss_pred CCCCcEEEEEECCCCCEEEEEECC-----------CEEEEEEccCCC
Confidence 56678899999999998877654 458889987654
No 381
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.93 E-value=6.3e-08 Score=105.73 Aligned_cols=224 Identities=13% Similarity=0.071 Sum_probs=128.7
Q ss_pred cccEEEEeCC-CCCeEEEEecCCCCCCeEEEEec--CCceeEEEec------C----CCccccccCCCcccceeecC-CC
Q 003363 154 TGASAVVPSP-SGSKLLVVRNPENESPIQFELWS--QSQLEKEFHV------P----QTVHGSVYADGWFEGISWNS-DE 219 (826)
Q Consensus 154 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~------~----~~~~g~v~~~~~~~~~~wSP-Dg 219 (826)
..+...+||| ||++||.....+ .+.+|+ .+........ . ....+. +..+.|+| ++
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------v~~~~~~~~~~ 112 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDG-----VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS------VETVQWYPHDT 112 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTS-----CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC------EEEEEECTTCT
T ss_pred CcEEEEEEecCCCCEEEEEcCCC-----eEEEEECCCCcccceEeccccccccccccccCCCc------EEEEEEccCCC
Confidence 4588999999 999998876543 355552 2222111110 0 112222 37999999 66
Q ss_pred CeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccce
Q 003363 220 TLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQ 299 (826)
Q Consensus 220 ~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~ 299 (826)
+.|+..+. ...|.+||+.+++.... ......+..
T Consensus 113 ~~l~s~~~--------------------------------------------d~~i~iwd~~~~~~~~~--~~~~~~~~~ 146 (408)
T 4a11_B 113 GMFTSSSF--------------------------------------------DKTLKVWDTNTLQTADV--FNFEETVYS 146 (408)
T ss_dssp TCEEEEET--------------------------------------------TSEEEEEETTTTEEEEE--EECSSCEEE
T ss_pred cEEEEEeC--------------------------------------------CCeEEEeeCCCCcccee--ccCCCceee
Confidence 66666532 25799999999887665 334445678
Q ss_pred EEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCcee
Q 003363 300 VVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRF 379 (826)
Q Consensus 300 ~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~ 379 (826)
+.|+|++.. .+.|+..+ ....|+++|+. .......+..+...+....|
T Consensus 147 ~~~~~~~~~-~~~~~~~~---------------~~~~v~~~d~~----------------~~~~~~~~~~~~~~v~~~~~ 194 (408)
T 4a11_B 147 HHMSPVSTK-HCLVAVGT---------------RGPKVQLCDLK----------------SGSCSHILQGHRQEILAVSW 194 (408)
T ss_dssp EEECSSCSS-CCEEEEEE---------------SSSSEEEEESS----------------SSCCCEEECCCCSCEEEEEE
T ss_pred eEeecCCCC-CcEEEEEc---------------CCCeEEEEeCC----------------CcceeeeecCCCCcEEEEEE
Confidence 889986542 01155444 33478899982 23345566667777889999
Q ss_pred cCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEE
Q 003363 380 SPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTML 459 (826)
Q Consensus 380 SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~ 459 (826)
+|||+++++....+ ..|.+||+.++................. ....+. .....+..+.|+|||+.|+
T Consensus 195 ~~~~~~ll~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~ 261 (408)
T 4a11_B 195 SPRYDYILATASAD----------SRVKLWDVRRASGCLITLDQHNGKKSQA--VESANT-AHNGKVNGLCFTSDGLHLL 261 (408)
T ss_dssp CSSCTTEEEEEETT----------SCEEEEETTCSSCCSEECCTTTTCSCCC--TTTSSC-SCSSCEEEEEECTTSSEEE
T ss_pred CCCCCcEEEEEcCC----------CcEEEEECCCCCccccccccccccccee--eccccc-cccCceeEEEEcCCCCEEE
Confidence 99999755454432 4588999877543111100000000000 000000 0222455778999999775
Q ss_pred EEEEeCCeEEEEEEECCCCcEEE
Q 003363 460 LSSIWGSSQVIISVNVSSGELLR 482 (826)
Q Consensus 460 ~~~~~~~~~~l~~vdl~tg~~~~ 482 (826)
.. ..++ .|..+|+.+++...
T Consensus 262 ~~-~~dg--~i~vwd~~~~~~~~ 281 (408)
T 4a11_B 262 TV-GTDN--RMRLWNSSNGENTL 281 (408)
T ss_dssp EE-ETTS--CEEEEETTTCCBCC
T ss_pred Ee-cCCC--eEEEEECCCCccce
Confidence 44 3333 46666887776543
No 382
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.93 E-value=4.5e-07 Score=101.26 Aligned_cols=291 Identities=11% Similarity=0.068 Sum_probs=162.6
Q ss_pred hhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEec
Q 003363 119 NLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHV 196 (826)
Q Consensus 119 ~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~ 196 (826)
-+..+.....+.++++.+. .....+.... ..+...+|+|++ .|+.....+ .+.+|+ .++......
T Consensus 134 ~l~sgs~dg~i~vwd~~~~-~~~~~~~~h~-----~~V~~l~~~~~~-~l~s~s~dg-----~i~vwd~~~~~~~~~~~- 200 (464)
T 3v7d_B 134 YVITGADDKMIRVYDSINK-KFLLQLSGHD-----GGVWALKYAHGG-ILVSGSTDR-----TVRVWDIKKGCCTHVFE- 200 (464)
T ss_dssp EEEEEETTSCEEEEETTTT-EEEEEECCCS-----SCEEEEEECSTT-EEEEEETTS-----CEEEEETTTTEEEEEEC-
T ss_pred EEEEEcCCCcEEEEECCCC-cEEEEEeCCC-----cCEEEEEEcCCC-EEEEEeCCC-----CEEEEECCCCcEEEEEC-
Confidence 3444455667777775322 2222333222 568999999999 666554432 456673 333333332
Q ss_pred CCCccccccCCCcccceeec--CCCCeEEEEeecCCCCCCCccCCCCCCCCC-----------------------CccCC
Q 003363 197 PQTVHGSVYADGWFEGISWN--SDETLIAYVAEEPSPSKPTFSLGSTKGGSS-----------------------DKDCN 251 (826)
Q Consensus 197 ~~~~~g~v~~~~~~~~~~wS--PDg~~ia~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~ 251 (826)
+..+.| ..+.|+ ||++.|+..+.+..... |+......... ...+.
T Consensus 201 --~h~~~v------~~l~~~~~~~~~~l~s~s~d~~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (464)
T 3v7d_B 201 --GHNSTV------RCLDIVEYKNIKYIVTGSRDNTLHV--WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 270 (464)
T ss_dssp --CCSSCE------EEEEEEESSSCEEEEEEETTSCEEE--EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS
T ss_pred --CCCCcc------EEEEEecCCCCCEEEEEcCCCcEEE--eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc
Confidence 222222 677777 68888888877664432 22111111000 00010
Q ss_pred CCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeec
Q 003363 252 SWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCY 331 (826)
Q Consensus 252 ~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~ 331 (826)
... ..+.++....+++..+..|.+||+.+++..... ......+..++|+|||+. |+..+
T Consensus 271 ~~v--~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~----l~sg~-------------- 329 (464)
T 3v7d_B 271 ASV--RTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYIL-SGHTDRIYSTIYDHERKR----CISAS-------------- 329 (464)
T ss_dssp SCE--EEEEEETTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEETTTTE----EEEEE--------------
T ss_pred ceE--EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCCEEEEEEcCCCCE----EEEEe--------------
Confidence 000 112333233445556788999999888765431 233456788999999997 76655
Q ss_pred cCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEe
Q 003363 332 NRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRID 410 (826)
Q Consensus 332 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d 410 (826)
.+..|+.+|+ .+++ ...+..+...+....|+ +++|+..+.+ ..|.+||
T Consensus 330 -~dg~i~vwd~-----------------~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d-----------g~v~vwd 378 (464)
T 3v7d_B 330 -MDTTIRIWDL-----------------ENGELMYTLQGHTALVGLLRLS--DKFLVSAAAD-----------GSIRGWD 378 (464)
T ss_dssp -TTSCEEEEET-----------------TTTEEEEEECCCSSCEEEEEEC--SSEEEEEETT-----------SEEEEEE
T ss_pred -CCCcEEEEEC-----------------CCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCC-----------CcEEEEE
Confidence 3347889998 4444 45666666667777776 5677666544 4589999
Q ss_pred CCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCe
Q 003363 411 WPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNF 490 (826)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~ 490 (826)
+.++...... . .........|++|++.|+.. . ++ .+..+|+.+|+...........
T Consensus 379 ~~~~~~~~~~------------~--------~~~~~~~~~~~~~~~~l~~~-~-dg--~i~iwd~~~g~~~~~~~~~~~~ 434 (464)
T 3v7d_B 379 ANDYSRKFSY------------H--------HTNLSAITTFYVSDNILVSG-S-EN--QFNIYNLRSGKLVHANILKDAD 434 (464)
T ss_dssp TTTCCEEEEE------------E--------CTTCCCEEEEEECSSEEEEE-E-TT--EEEEEETTTCCEEESCTTTTCS
T ss_pred CCCCceeeee------------c--------CCCCccEEEEEeCCCEEEEe-c-CC--eEEEEECCCCcEEehhhccCCC
Confidence 8774421100 0 00122355789999866543 3 33 5777798899877632222222
Q ss_pred eeEEEeecCCEEEEEEeC
Q 003363 491 SWSLLTLDGDNIIAVSSS 508 (826)
Q Consensus 491 ~~~~~s~dg~~l~~~~s~ 508 (826)
....++.+++.+++..++
T Consensus 435 ~v~~v~~~~~~l~~~~~~ 452 (464)
T 3v7d_B 435 QIWSVNFKGKTLVAAVEK 452 (464)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred cEEEEEecCCEEEEEEEe
Confidence 333455567777666654
No 383
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.92 E-value=3.5e-08 Score=106.02 Aligned_cols=237 Identities=14% Similarity=0.104 Sum_probs=126.7
Q ss_pred eeEEEEEEeecCCCCccceeecCCcceecccEEEEeCC-CCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccc
Q 003363 126 KKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSP-SGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHG 202 (826)
Q Consensus 126 ~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g 202 (826)
...+.++++... .....+.... ..+....|+| +|+.|+.....+ .+.+|+ .++............+
T Consensus 94 dg~i~v~d~~~~-~~~~~~~~~~-----~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~ 162 (366)
T 3k26_A 94 RGIIRIINPITM-QCIKHYVGHG-----NAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQTDTLVAIFGGVEGHRD 162 (366)
T ss_dssp TCEEEEECTTTC-CEEEEEESCC-----SCEEEEEECSSCTTEEEEEETTS-----CEEEEETTTTEEEEEECSTTSCSS
T ss_pred CCEEEEEEchhc-eEeeeecCCC-----CcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeecCeEEEEecccccccC
Confidence 446677765322 2223333222 4688999999 899888876543 456663 3333333311122222
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccC
Q 003363 203 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS 282 (826)
Q Consensus 203 ~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~ 282 (826)
.| ..+.|+|||+.|+..+.+ ..|.+||+.+
T Consensus 163 ~v------~~~~~~~~~~~l~~~~~d--------------------------------------------g~i~i~d~~~ 192 (366)
T 3k26_A 163 EV------LSADYDLLGEKIMSCGMD--------------------------------------------HSLKLWRINS 192 (366)
T ss_dssp CE------EEEEECTTSSEEEEEETT--------------------------------------------SCEEEEESCS
T ss_pred ce------eEEEECCCCCEEEEecCC--------------------------------------------CCEEEEECCC
Confidence 33 799999999999887543 3466666665
Q ss_pred CceEec-c--------------------------CCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCC
Q 003363 283 GEVQAV-K--------------------------GIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPC 335 (826)
Q Consensus 283 g~~~~l-~--------------------------~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~ 335 (826)
++.... . .......+..+.|+ ++. |+..+ .+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~----l~~~~---------------~d~ 251 (366)
T 3k26_A 193 KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL----ILSKS---------------CEN 251 (366)
T ss_dssp HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE----EEEEC---------------SSS
T ss_pred CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE----EEEEe---------------cCC
Confidence 542211 0 01133456678888 555 55554 234
Q ss_pred ceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCC--CCEEEEEeccCCCCCCCCcccceEEEEeCCC
Q 003363 336 ALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPD--GKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 413 (826)
Q Consensus 336 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpD--G~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~ 413 (826)
.|.++|+......-.... ...........+..+...+....|+|| |++|+..+.+ ..|++||+.+
T Consensus 252 ~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d-----------g~i~vwd~~~ 318 (366)
T 3k26_A 252 AIVCWKPGKMEDDIDKIK--PSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQV-----------GKLYVWDLEV 318 (366)
T ss_dssp EEEEEEESSTTCCGGGCC--TTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTT-----------SCEEEEECCS
T ss_pred EEEEEeCCCccccccccc--cCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecC-----------CcEEEEECCC
Confidence 677888732100000000 000000113344445566888999999 9988866544 3589999888
Q ss_pred CCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEE
Q 003363 414 NGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 471 (826)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~ 471 (826)
++..... ...+.... ....+..+.|+|||+.|+ +...++...+|
T Consensus 319 ~~~~~~~------~~~~~~~~-------~~~~v~~~~~s~~~~~l~-s~~~dg~i~iw 362 (366)
T 3k26_A 319 EDPHKAK------CTTLTHHK-------CGAAIRQTSFSRDSSILI-AVCDDASIWRW 362 (366)
T ss_dssp SSGGGCE------EEEECCTT-------CCSCEEEEEECTTSSEEE-EEETTSEEEEE
T ss_pred CCCcccc------ceEEcccc-------cCCceEEEEeCCCCCeEE-EEeCCCEEEEE
Confidence 6542110 00000000 012345788999999665 44445544444
No 384
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.91 E-value=3.3e-09 Score=106.57 Aligned_cols=199 Identities=13% Similarity=0.038 Sum_probs=108.5
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (826)
.+.|+++||.+.. ...|......|.. |.|+.+|++| ++. ...|+.+.++.+. ...
T Consensus 17 ~~~l~~~hg~~~~--~~~~~~~~~~l~~--~~v~~~d~~g---~~~-------------~~~~~~~~i~~~~-----~~~ 71 (230)
T 1jmk_C 17 EQIIFAFPPVLGY--GLMYQNLSSRLPS--YKLCAFDFIE---EED-------------RLDRYADLIQKLQ-----PEG 71 (230)
T ss_dssp SEEEEEECCTTCC--GGGGHHHHHHCTT--EEEEEECCCC---STT-------------HHHHHHHHHHHHC-----CSS
T ss_pred CCCEEEECCCCCc--hHHHHHHHHhcCC--CeEEEecCCC---HHH-------------HHHHHHHHHHHhC-----CCC
Confidence 4779999997654 4567777777754 9999999997 321 2445555555431 135
Q ss_pred cEEEEEecchHHHHHHHHHhC---CCceeEEEecCCccchh--hhccCCCCCCchhhhhccCcCCccCCCCCChhhHH--
Q 003363 672 KVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCNLA--LMVGTTDIPDWCYVESYGSKGKDSFTESPSVEDLT-- 744 (826)
Q Consensus 672 rv~l~G~S~GG~~a~~~a~~~---p~~~~a~v~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 744 (826)
++.++|||+||.++..++.+. ++.++++++.++..... .+..................... +..........
T Consensus 72 ~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 150 (230)
T 1jmk_C 72 PLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEA-LNSEAVKHGLKQK 150 (230)
T ss_dssp CEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCEECCCC--------CCHHHHHHHTTTCSG-GGSHHHHHHHHHH
T ss_pred CeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCCCCCcccccccccHHHHHHHHHhcChhhhh-hhhHHHHHHHHHH
Confidence 799999999999999998765 36788888877653211 00000000000000000000000 00000000000
Q ss_pred --HHhhcCc-ccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhC-CCCEEEEEeCCCCC--CCCCCCCHHHHHHHHH
Q 003363 745 --RFHSKSP-ISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREK-GVETKVIVFPNDVH--GIERPQSDFESFLNIG 818 (826)
Q Consensus 745 --~~~~~sp-~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~-g~~~~~~~~p~~~H--~~~~~~~~~~~~~~i~ 818 (826)
.+..... .....++++|+++++|++|..++. .. ..+.+. ...++++.+++ +| .+. .+....+...+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~----~~w~~~~~~~~~~~~i~g-~H~~~~~-~~~~~~~~~~i~ 223 (230)
T 1jmk_C 151 THAFYSYYVNLISTGQVKADIDLLTSGADFDIPE-WL----ASWEEATTGAYRMKRGFG-THAEMLQ-GETLDRNAGILL 223 (230)
T ss_dssp HHHHHHHHHHCCCCSCBSSEEEEEECSSCCCCCT-TE----ECSGGGBSSCEEEEECSS-CGGGTTS-HHHHHHHHHHHH
T ss_pred HHHHHHHhhhccccccccccEEEEEeCCCCCCcc-cc----chHHHhcCCCeEEEEecC-ChHHHcC-cHhHHHHHHHHH
Confidence 0000100 123467889999999999998862 21 122221 23588999997 88 443 333334556666
Q ss_pred HHHHH
Q 003363 819 LWFKK 823 (826)
Q Consensus 819 ~w~~~ 823 (826)
+|+.+
T Consensus 224 ~~l~~ 228 (230)
T 1jmk_C 224 EFLNT 228 (230)
T ss_dssp HHHTC
T ss_pred HHHhh
Confidence 66643
No 385
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.91 E-value=1.6e-09 Score=122.60 Aligned_cols=127 Identities=21% Similarity=0.183 Sum_probs=89.4
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccc-hHHHHHHH-HCCcEEEEECCCCC-CCCchhhhhcCCCCCCcchH
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSY-SKSLAFLS-SVGYSLLIVNYRGS-LGFGEEALQSLPGKVGSQDV 652 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~-~~~~~~la-~~G~~Vl~~d~rG~-~g~G~~~~~~~~~~~~~~~~ 652 (826)
+...+|.|... .++.|+||++|||++....... ......|+ +.|++|+.+|||.. .||.... ..+...+...+
T Consensus 95 l~lnv~~P~~~--~~~~Pv~v~iHGG~~~~g~~~~~~~~~~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~~~~~~n~gl 170 (537)
T 1ea5_A 95 LYLNIWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALH--GSQEAPGNVGL 170 (537)
T ss_dssp CEEEEEECSSC--CSSEEEEEEECCSTTTCCCTTCGGGCTHHHHHHHTCEEEECCCCCHHHHHCCCT--TCSSSCSCHHH
T ss_pred CeEEEeccCCC--CCCCeEEEEECCCcccCCCCCCCccChHHHHhcCCEEEEEeccCccccccccCC--CCCCCcCcccc
Confidence 34457788742 3678999999998876544321 12234565 78999999999942 1221110 00112334458
Q ss_pred HHHHHHHHHHHHcC---CCCCCcEEEEEecchHHHHHHHHHh--CCCceeEEEecCCcc
Q 003363 653 NDVLTAIDHVIDMG---LANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPLC 706 (826)
Q Consensus 653 ~D~~~~i~~l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~p~~ 706 (826)
.|+.++++|+.++. ..|+++|.|+|+|+||.++..++.. ...+|+++|+.+|..
T Consensus 171 ~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~ 229 (537)
T 1ea5_A 171 LDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSP 229 (537)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCc
Confidence 99999999999862 4799999999999999999888764 246899999999864
No 386
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.91 E-value=1.7e-08 Score=105.93 Aligned_cols=262 Identities=8% Similarity=-0.010 Sum_probs=143.2
Q ss_pred cceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCcccc
Q 003363 124 KRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGS 203 (826)
Q Consensus 124 ~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~ 203 (826)
.....+.++++... .....+.... ..+...+|+|+|+.|+.....+ .-.+|.++.......+... ....+.
T Consensus 36 ~~dg~v~vw~~~~~-~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~dg--~i~~~~~~~~~~~~~~~~~-~~~~~~ 106 (313)
T 3odt_A 36 SRDGTVRLWSKDDQ-WLGTVVYTGQ-----GFLNSVCYDSEKELLLFGGKDT--MINGVPLFATSGEDPLYTL-IGHQGN 106 (313)
T ss_dssp ETTSEEEEEEESSS-EEEEEEEECS-----SCEEEEEEETTTTEEEEEETTS--CEEEEETTCCTTSCC-CEE-CCCSSC
T ss_pred EcCCcEEEEECCCC-EEEEEeecCC-----ccEEEEEECCCCCEEEEecCCC--eEEEEEeeecCCCCcccch-hhcccC
Confidence 34556777776322 1122222222 4688999999999998876543 3233333322211111111 122222
Q ss_pred ccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeec-CCCccCCCccCceEEEEEccC
Q 003363 204 VYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE-DWGETYAGKRQPSLFVININS 282 (826)
Q Consensus 204 v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~g~~~~~~~~~~l~v~d~~~ 282 (826)
| ..+.| +++.|+..+.+.... .|+ ..........+........|.+ +....+++.....|.+||. .
T Consensus 107 i------~~~~~--~~~~l~~~~~d~~i~--~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~-~ 173 (313)
T 3odt_A 107 V------CSLSF--QDGVVISGSWDKTAK--VWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN-D 173 (313)
T ss_dssp E------EEEEE--ETTEEEEEETTSEEE--EEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET-T
T ss_pred E------EEEEe--cCCEEEEEeCCCCEE--EEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec-C
Confidence 2 56777 677887776655332 222 0111111112223333445555 4344455556788999993 2
Q ss_pred CceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCC
Q 003363 283 GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL 362 (826)
Q Consensus 283 g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 362 (826)
.....+. ......+..++|+|+++ ++..+ .+..|+++|+ .++
T Consensus 174 ~~~~~~~-~~~~~~i~~~~~~~~~~-----~~~~~---------------~dg~i~i~d~-----------------~~~ 215 (313)
T 3odt_A 174 KVIKTFS-GIHNDVVRHLAVVDDGH-----FISCS---------------NDGLIKLVDM-----------------HTG 215 (313)
T ss_dssp EEEEEEC-SSCSSCEEEEEEEETTE-----EEEEE---------------TTSEEEEEET-----------------TTC
T ss_pred ceEEEEe-ccCcccEEEEEEcCCCe-----EEEcc---------------CCCeEEEEEC-----------------Cch
Confidence 3333342 22455678899999987 55544 2347889998 434
Q ss_pred -cceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCccc
Q 003363 363 -PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL 441 (826)
Q Consensus 363 -~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~ 441 (826)
....+..+...+....|+||| +|+..+.+ ..|++||+.++..... +...
T Consensus 216 ~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----------g~v~iwd~~~~~~~~~----------~~~~-------- 265 (313)
T 3odt_A 216 DVLRTYEGHESFVYCIKLLPNG-DIVSCGED-----------RTVRIWSKENGSLKQV----------ITLP-------- 265 (313)
T ss_dssp CEEEEEECCSSCEEEEEECTTS-CEEEEETT-----------SEEEEECTTTCCEEEE----------EECS--------
T ss_pred hhhhhhhcCCceEEEEEEecCC-CEEEEecC-----------CEEEEEECCCCceeEE----------Eecc--------
Confidence 345566667778899999999 45544433 4699999887653211 1110
Q ss_pred ccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcE
Q 003363 442 YSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL 480 (826)
Q Consensus 442 ~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~ 480 (826)
...+..+.|+|||+ ++ +...++ .|..+|+.+++.
T Consensus 266 -~~~i~~~~~~~~~~-~~-~~~~dg--~i~iw~~~~~~~ 299 (313)
T 3odt_A 266 -AISIWSVDCMSNGD-II-VGSSDN--LVRIFSQEKSRW 299 (313)
T ss_dssp -SSCEEEEEECTTSC-EE-EEETTS--CEEEEESCGGGC
T ss_pred -CceEEEEEEccCCC-EE-EEeCCC--cEEEEeCCCCce
Confidence 11234678999998 43 344444 455556666553
No 387
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.91 E-value=7.2e-08 Score=114.95 Aligned_cols=245 Identities=11% Similarity=0.072 Sum_probs=143.1
Q ss_pred EEEecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCC-ccceeecCCcceecccEEEEeCCC--CCeEEEEecCC
Q 003363 99 WTFNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENEN-SVTFQWAPFPVEMTGASAVVPSPS--GSKLLVVRNPE 175 (826)
Q Consensus 99 ~~~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~-~~~lt~~~~~~~~~~~~~~~~SPd--G~~la~~~~~~ 175 (826)
...-.++|||+.++... ..+.+.++++...... ...+.... ..+...+|||+ |+.|+.....+
T Consensus 12 V~~l~~s~dg~~latg~---------~dg~I~vwd~~~~~~~~~~~l~~h~-----~~V~~l~~s~~~~~~~l~s~s~Dg 77 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCS---------SDKTIKIFEVEGETHKLIDTLTGHE-----GPVWRVDWAHPKFGTILASCSYDG 77 (753)
T ss_dssp EEEECCCSSSCCEEEEE---------TTTEEEEEEEETTEEEEEEEECCCS-----SCEEEEEECCTTSCSEEEEEETTS
T ss_pred eEEEEECCCCCeEEEEE---------CCCcEEEEecCCCCCccceeccCCc-----CceEEEEecCCCCCCEEEEEeCCC
Confidence 33445689999876542 2345666666432221 12222222 46889999999 99998876643
Q ss_pred CCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCC--CCeEEEEeecCCCCCCCccCCCCCCCCCCccCC
Q 003363 176 NESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCN 251 (826)
Q Consensus 176 ~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPD--g~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (826)
.+.+| ..++...+... ....+.| ..+.|+|+ |+.|+..+.+
T Consensus 78 -----~I~vwd~~~~~~~~~~~~-~~h~~~V------~~v~~sp~~~~~~l~sgs~d----------------------- 122 (753)
T 3jro_A 78 -----KVLIWKEENGRWSQIAVH-AVHSASV------NSVQWAPHEYGPLLLVASSD----------------------- 122 (753)
T ss_dssp -----CEEEEEEETTEEEEEEEE-CCCSSCE------EEEEECCGGGCSEEEEEETT-----------------------
T ss_pred -----eEEEEECCCCcccccccc-cCCCCCe------EEEEECCCCCCCEEEEEeCC-----------------------
Confidence 34555 23332222222 1222233 79999999 8888876433
Q ss_pred CCCCcceeecCCCccCCCccCceEEEEEccCCc---eEeccCCCCCCccceEEEee-------------CCCCCccEEEE
Q 003363 252 SWKGQGDWEEDWGETYAGKRQPSLFVININSGE---VQAVKGIPKSLSVGQVVWAP-------------LNEGLHQYLVF 315 (826)
Q Consensus 252 ~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~---~~~l~~~~~~~~~~~~~wSP-------------Dg~~~~~~lvf 315 (826)
..|.+||+.++. ...+ ......+..+.|+| ||+. |+.
T Consensus 123 ---------------------g~I~vwdl~~~~~~~~~~~--~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~----l~s 175 (753)
T 3jro_A 123 ---------------------GKVSVVEFKENGTTSPIII--DAHAIGVNSASWAPATIEEDGEHNGTKESRK----FVT 175 (753)
T ss_dssp ---------------------SEEEEEECCSSSCCCCEEE--ECCSSCEEEEEECCCC---------CGGGCC----EEE
T ss_pred ---------------------CcEEEEEeecCCCcceeEe--ecCCCceEEEEecCcccccccccccCCCCCE----EEE
Confidence 578999988763 2223 23344677899999 5777 776
Q ss_pred EeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCC-CcceecCCCCccccCceecCC---CCEEEEEec
Q 003363 316 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVNLTESISSAFFPRFSPD---GKFLVFLSA 391 (826)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~Lt~~~~~~~~p~~SpD---G~~l~f~s~ 391 (826)
.+ .+..|+++|+.... .. .....+..+...+....|+|| |+.|+..+.
T Consensus 176 gs---------------~dg~I~iwd~~~~~-------------~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 176 GG---------------ADNLVKIWKYNSDA-------------QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EE---------------TTSCEEEEEEETTT-------------TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred EE---------------CCCeEEEEeccCCc-------------ccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 65 23467788772100 00 122455666777899999999 887776664
Q ss_pred cCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEE
Q 003363 392 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVII 471 (826)
Q Consensus 392 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~ 471 (826)
+ ..|.+||+.++......... . . . .+...+..++|+|||+.|+ +...++...+|
T Consensus 228 D-----------g~I~iwd~~~~~~~~~~~~~----~---~---~----~~~~~v~~l~~spdg~~l~-s~s~Dg~I~vw 281 (753)
T 3jro_A 228 D-----------RTCIIWTQDNEQGPWKKTLL----K---E---E----KFPDVLWRASWSLSGNVLA-LSGGDNKVTLW 281 (753)
T ss_dssp S-----------SCEEEEEESSSSSCCBCCBS----S---S---S----CCSSCCCCEEECTTTCCEE-EECSSSCEECC
T ss_pred C-----------CEEEEecCCCCCCcceeEEe----c---c---C----CCCCceEEEEEcCCCCEEE-EEcCCCEEEEE
Confidence 4 35888988775432111000 0 0 0 0122456789999998664 44445554444
Q ss_pred EE
Q 003363 472 SV 473 (826)
Q Consensus 472 ~v 473 (826)
.+
T Consensus 282 d~ 283 (753)
T 3jro_A 282 KE 283 (753)
T ss_dssp BC
T ss_pred ec
Confidence 43
No 388
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.90 E-value=8.4e-09 Score=106.73 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=83.5
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccch-HHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHH
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYS-KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVND 654 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~-~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D 654 (826)
+...++.|.. .+.+..+.||++||..... ...|. .....|+++||.|+.+|++|. |... .....++
T Consensus 50 L~~~i~~p~~-~~~~~~~pVVLvHG~~~~~-~~~w~~~l~~~L~~~Gy~V~a~DlpG~---G~~~--------~~~~~~~ 116 (316)
T 3icv_A 50 LDAGLTCQGA-SPSSVSKPILLVPGTGTTG-PQSFDSNWIPLSAQLGYTPCWISPPPF---MLND--------TQVNTEY 116 (316)
T ss_dssp HHHTEEETTB-BTTBCSSEEEEECCTTCCH-HHHHTTTHHHHHHHTTCEEEEECCTTT---TCSC--------HHHHHHH
T ss_pred HhhhEeCCCC-CCCCCCCeEEEECCCCCCc-HHHHHHHHHHHHHHCCCeEEEecCCCC---CCCc--------HHHHHHH
Confidence 3344555633 2334556799999965431 13565 678899999999999999984 3211 1123567
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhC---CCceeEEEecCCccc
Q 003363 655 VLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCN 707 (826)
Q Consensus 655 ~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~---p~~~~a~v~~~p~~~ 707 (826)
+.+.++.+.+.. ..+++.|+||||||.++.+++..+ +++++.+|+++|...
T Consensus 117 la~~I~~l~~~~--g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~ 170 (316)
T 3icv_A 117 MVNAITTLYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 170 (316)
T ss_dssp HHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHh--CCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCC
Confidence 888888887763 347899999999999998777765 589999999998654
No 389
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.90 E-value=5.6e-09 Score=106.00 Aligned_cols=190 Identities=7% Similarity=-0.022 Sum_probs=111.0
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANP 670 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~ 670 (826)
..|.||++||.+.. ...|...+..|. .+|.|+.+|++|. + ...+++.+.++.+. ..
T Consensus 21 ~~~~l~~~hg~~~~--~~~~~~~~~~l~-~~~~v~~~d~~g~---~-------------~~~~~~~~~i~~~~-----~~ 76 (244)
T 2cb9_A 21 GGKNLFCFPPISGF--GIYFKDLALQLN-HKAAVYGFHFIEE---D-------------SRIEQYVSRITEIQ-----PE 76 (244)
T ss_dssp CSSEEEEECCTTCC--GGGGHHHHHHTT-TTSEEEEECCCCS---T-------------THHHHHHHHHHHHC-----SS
T ss_pred CCCCEEEECCCCCC--HHHHHHHHHHhC-CCceEEEEcCCCH---H-------------HHHHHHHHHHHHhC-----CC
Confidence 35679999997654 456777777775 5899999999982 1 12455555554431 13
Q ss_pred CcEEEEEecchHHHHHHHHHhC---CCceeEEEecCCccchhhhccCCCCCCchhhhhccCcCCccCCCCCC-h------
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQA---PDKFVAAAARNPLCNLALMVGTTDIPDWCYVESYGSKGKDSFTESPS-V------ 740 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~---p~~~~a~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------ 740 (826)
.++.|+|||+||.++..++.+. ++.+.++++.++...... ......... ...+. .+. .
T Consensus 77 ~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~~~~~~------~~~~~~~~~-----~~~~~-~~~~~~~~~~~ 144 (244)
T 2cb9_A 77 GPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAYKKDQS------ITADTENDD-----SAAYL-PEAVRETVMQK 144 (244)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCCCSC------CCCC------------CCS-CHHHHHHHTHH
T ss_pred CCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCCCCccc------ccccccHHH-----HHHHh-HHHHHHHHHHH
Confidence 5799999999999999998765 577888888876532100 000000000 00000 000 0
Q ss_pred -hhHHHHhhcCcccccCCCCCcEEEEEeC--CCCCCCcHHHHHHHHHHHhC-CCCEEEEEeCCCCCC-CCCCCCHHHHHH
Q 003363 741 -EDLTRFHSKSPISHISKVKTPTIFLLGA--QDLRVPVSNGLQYARALREK-GVETKVIVFPNDVHG-IERPQSDFESFL 815 (826)
Q Consensus 741 -~~~~~~~~~sp~~~~~~i~~PvLii~G~--~D~~vp~~~~~~~~~~l~~~-g~~~~~~~~p~~~H~-~~~~~~~~~~~~ 815 (826)
.....+... .....++++|+++++|+ +|. +++... +.+.+. ..+++++++|+ +|. +...+....+..
T Consensus 145 ~~~~~~~~~~--~~~~~~i~~Pvl~i~g~~~~D~-~~~~~~----~~w~~~~~~~~~~~~i~g-gH~~~~~~~~~~~~~~ 216 (244)
T 2cb9_A 145 KRCYQEYWAQ--LINEGRIKSNIHFIEAGIQTET-SGAMVL----QKWQDAAEEGYAEYTGYG-AHKDMLEGEFAEKNAN 216 (244)
T ss_dssp HHHHHHHHHH--CCCCSCBSSEEEEEECSBCSCC-CHHHHT----TSSGGGBSSCEEEEECSS-BGGGTTSHHHHHHHHH
T ss_pred HHHHHHHHHh--hccCCCcCCCEEEEEccCcccc-ccccch----hHHHHhcCCCCEEEEecC-ChHHHcChHHHHHHHH
Confidence 001111110 12346788999999999 887 333222 222222 23589999997 883 333334446777
Q ss_pred HHHHHHHHH
Q 003363 816 NIGLWFKKY 824 (826)
Q Consensus 816 ~i~~w~~~~ 824 (826)
.+.+||.+.
T Consensus 217 ~i~~~L~~~ 225 (244)
T 2cb9_A 217 IILNILDKI 225 (244)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcC
Confidence 888888753
No 390
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.89 E-value=1.2e-07 Score=105.16 Aligned_cols=267 Identities=9% Similarity=0.014 Sum_probs=139.8
Q ss_pred CC-CcceEEEEEeechhhcccceeEEEEEEeec---CCCCcccee-ecCCcceecccEEEEeCCCCCeEEEEecCCCCCC
Q 003363 105 NG-NGTQAMFSISQPNLLANKRKKFMLSTVISK---ENENSVTFQ-WAPFPVEMTGASAVVPSPSGSKLLVVRNPENESP 179 (826)
Q Consensus 105 s~-dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~---~~~~~~~lt-~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~ 179 (826)
+| ||+.++... .+..+.++++.. .......++ ... ..+...+|+|+|+.|+.....+ .-
T Consensus 72 s~~~~~~l~s~s---------~dg~v~vwd~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~s~dg--~i 135 (437)
T 3gre_A 72 SPGETPYLITGS---------DQGVIKIWNLKEIIVGEVYSSSLTYDCS-----STVTQITMIPNFDAFAVSSKDG--QI 135 (437)
T ss_dssp ECSSSCEEEEEE---------TTSEEEEEEHHHHHTTCCCSCSEEEECS-----SCEEEEEECTTSSEEEEEETTS--EE
T ss_pred CCCCCCEEEEec---------CCceEEEeECcccccCcccceeeeccCC-----CCEEEEEEeCCCCEEEEEeCCC--EE
Confidence 67 887665432 345677777644 210111222 112 4689999999999998876543 22
Q ss_pred eEEEEe--cCCceeEEEecCCCcccccc----CCCccccee--ecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCC
Q 003363 180 IQFELW--SQSQLEKEFHVPQTVHGSVY----ADGWFEGIS--WNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCN 251 (826)
Q Consensus 180 ~~~~i~--~~~~~~~~~~~~~~~~g~v~----~~~~~~~~~--wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (826)
.+|.+. ..++..+..... .++.-.+ .++....+. |+||++.|+..+.
T Consensus 136 ~vwd~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------------------ 190 (437)
T 3gre_A 136 IVLKVNHYQQESEVKFLNCE-CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN------------------------ 190 (437)
T ss_dssp EEEEEEEEEETTEEEEEEEE-EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET------------------------
T ss_pred EEEEeccccCCceeeccccc-eeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC------------------------
Confidence 333332 133332222111 1100000 011112333 6677877776543
Q ss_pred CCCCcceeecCCCccCCCccCceEEEEEccCCceEec-cCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeee
Q 003363 252 SWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV-KGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYC 330 (826)
Q Consensus 252 ~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l-~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~ 330 (826)
...|.+||+.+++.... .+......+..++|+|||+. |+..+
T Consensus 191 --------------------d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~----l~s~~------------- 233 (437)
T 3gre_A 191 --------------------LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCV----LILGT------------- 233 (437)
T ss_dssp --------------------TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCE----EEEEE-------------
T ss_pred --------------------CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCE----EEEEc-------------
Confidence 35799999988876543 21113457789999999997 76655
Q ss_pred ccCCCceEEEEcccccchhhhhhhhcCCCCCCcc-eecC-CCCcccc----CceecCCCCEEEEEeccCCCCCCCCcccc
Q 003363 331 YNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLT-ESISSAF----FPRFSPDGKFLVFLSAKSSVDSGAHSATD 404 (826)
Q Consensus 331 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt-~~~~~~~----~p~~SpDG~~l~f~s~~~~~~~g~~~~~~ 404 (826)
.+..|.++|+ ..++. ..+. .+...+. .|.|+|||+.|+..+.+ .
T Consensus 234 --~dg~i~iwd~-----------------~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----------g 283 (437)
T 3gre_A 234 --TRGIIDIWDI-----------------RFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-----------T 283 (437)
T ss_dssp --TTSCEEEEET-----------------TTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-----------E
T ss_pred --CCCeEEEEEc-----------------CCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC-----------C
Confidence 3347888998 44443 3332 3333333 44778888877755533 4
Q ss_pred eEEEEeCCCCCCCCcccceeeeeeeeec-cCC-----CCCcc-cccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCC
Q 003363 405 SLHRIDWPTNGNFSSLEKIVDVIPVVQC-AEG-----DCFPG-LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSS 477 (826)
Q Consensus 405 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~f~g-~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~t 477 (826)
.|.+||+.++............+..... +.. ..+.| .+...+..++|+ +++ ++++...++ .|..+|+.+
T Consensus 284 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-~l~s~~~d~--~i~~wd~~~ 359 (437)
T 3gre_A 284 FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-ILLTDEATS--SIVMFSLNE 359 (437)
T ss_dssp EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-EEEEEGGGT--EEEEEETTC
T ss_pred cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-EEEecCCCC--eEEEEECCC
Confidence 6999999876532211111000000000 000 01111 122345677888 665 445544344 566678888
Q ss_pred CcEEEe
Q 003363 478 GELLRI 483 (826)
Q Consensus 478 g~~~~l 483 (826)
++....
T Consensus 360 ~~~~~~ 365 (437)
T 3gre_A 360 LSSSKA 365 (437)
T ss_dssp GGGCEE
T ss_pred cccceE
Confidence 764433
No 391
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.89 E-value=7.1e-08 Score=102.42 Aligned_cols=194 Identities=12% Similarity=0.086 Sum_probs=111.7
Q ss_pred CCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCc---cceeecCCcceecccEEEEeCC--CCCeEEEEecCCCCC
Q 003363 104 GNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENS---VTFQWAPFPVEMTGASAVVPSP--SGSKLLVVRNPENES 178 (826)
Q Consensus 104 ~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~---~~lt~~~~~~~~~~~~~~~~SP--dG~~la~~~~~~~~~ 178 (826)
++|||+.++... ....+.++++....... ..+.... ..+...+|+| ||+.|+.....+
T Consensus 19 ~~~~~~~l~~~~---------~dg~i~iw~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~d~~~l~s~~~dg--- 81 (351)
T 3f3f_A 19 YDFYGRHVATCS---------SDQHIKVFKLDKDTSNWELSDSWRAHD-----SSIVAIDWASPEYGRIIASASYDK--- 81 (351)
T ss_dssp ECSSSSEEEEEE---------TTSEEEEEEECSSSCCEEEEEEEECCS-----SCEEEEEECCGGGCSEEEEEETTS---
T ss_pred EcCCCCEEEEee---------CCCeEEEEECCCCCCcceecceeccCC-----CcEEEEEEcCCCCCCEEEEEcCCC---
Confidence 478998776542 23466677765433221 1222222 4588999999 699998876543
Q ss_pred CeEEEEec--CCce-------eEEEecCCCccccccCCCcccceeecCC--CCeEEEEeecCCCCCCCccCCCCCCCCCC
Q 003363 179 PIQFELWS--QSQL-------EKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGSTKGGSSD 247 (826)
Q Consensus 179 ~~~~~i~~--~~~~-------~~~~~~~~~~~g~v~~~~~~~~~~wSPD--g~~ia~~~~~~~~~~~~~~~~~~~~~~~~ 247 (826)
.+.+|+ .++. ..+... ....+.| ..+.|+|+ ++.|+..+.+
T Consensus 82 --~v~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~v------~~~~~~~~~~~~~l~~~~~d------------------- 133 (351)
T 3f3f_A 82 --TVKLWEEDPDQEECSGRRWNKLCTL-NDSKGSL------YSVKFAPAHLGLKLACLGND------------------- 133 (351)
T ss_dssp --CEEEEEECTTSCTTSSCSEEEEEEE-CCCSSCE------EEEEECCGGGCSEEEEEETT-------------------
T ss_pred --eEEEEecCCCcccccccCcceeeee-cccCCce------eEEEEcCCCCCcEEEEecCC-------------------
Confidence 344552 2210 222222 1222333 78999999 9988886543
Q ss_pred ccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEec----------c--CCCCCCccceEEEeeC---CCCCccE
Q 003363 248 KDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAV----------K--GIPKSLSVGQVVWAPL---NEGLHQY 312 (826)
Q Consensus 248 ~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l----------~--~~~~~~~~~~~~wSPD---g~~~~~~ 312 (826)
..|.+||+.+++.... . .......+..+.|+|+ ++.
T Consensus 134 -------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---- 184 (351)
T 3f3f_A 134 -------------------------GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEK---- 184 (351)
T ss_dssp -------------------------CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCE----
T ss_pred -------------------------CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcE----
Confidence 4688888776653211 0 0122335678999998 665
Q ss_pred EEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc---ceecCCCCccccCceecCCC----CE
Q 003363 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVNLTESISSAFFPRFSPDG----KF 385 (826)
Q Consensus 313 lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~Lt~~~~~~~~p~~SpDG----~~ 385 (826)
|+..+. ...+...+. ..+. ...+..+...+....|+|+| +.
T Consensus 185 l~~~~~---------------~~~~~~~~~-----------------~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~ 232 (351)
T 3f3f_A 185 LAVSAL---------------EQAIIYQRG-----------------KDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQL 232 (351)
T ss_dssp EEEEET---------------TEEEEEEEC-----------------TTSCEEEEEECCCCCSCEEEEEECCCSSCSSEE
T ss_pred EEEecC---------------CCcEEEEcc-----------------CCCceeeeeecCCCCcceeEEEECCCCCCcceE
Confidence 555541 113333333 2333 34455566778899999999 56
Q ss_pred EEEEeccCCCCCCCCcccceEEEEeCCCC
Q 003363 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (826)
Q Consensus 386 l~f~s~~~~~~~g~~~~~~~l~~~d~~~~ 414 (826)
|+..+.+ ..|.+||+.++
T Consensus 233 l~s~~~d-----------g~i~iwd~~~~ 250 (351)
T 3f3f_A 233 IATGCKD-----------GRIRIFKITEK 250 (351)
T ss_dssp EEEEETT-----------SCEEEEEEEEC
T ss_pred EEEEcCC-----------CeEEEEeCCCC
Confidence 6555543 34777877654
No 392
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.88 E-value=5.5e-07 Score=94.52 Aligned_cols=243 Identities=14% Similarity=0.083 Sum_probs=149.7
Q ss_pred EEEEeCCCCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 003363 157 SAVVPSPSGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (826)
Q Consensus 157 ~~~~~SPdG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~ 234 (826)
...+|||++ .||...+. .+.+| ..++..+..... +..+.| ..++|+|||+.||..+.+
T Consensus 29 ~~l~WS~~~-~lAvg~D~------tV~iWd~~tg~~~~~~~~~-~~~~~V------~~v~~~~~~~~l~sgs~D------ 88 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVALDN------SVYLWSASSGDILQLLQME-QPGEYI------SSVAWIKEGNYLAVGTSS------ 88 (318)
T ss_dssp BCEEECTTS-EEEEEETT------EEEEEETTTCCEEEEEECC-STTCCE------EEEEECTTSSEEEEEETT------
T ss_pred eEEEECCCC-EEEEEeCC------EEEEEECCCCCEEEEEEec-CCCCeE------EEEEECCCCCEEEEEECC------
Confidence 457999987 67764432 46788 355655655432 222223 789999999999876543
Q ss_pred CccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEE
Q 003363 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 314 (826)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lv 314 (826)
..|.+||+.+++.... .... ......++++++. ++
T Consensus 89 --------------------------------------g~v~iw~~~~~~~~~~--~~~h-~~~~~~~~~~~~~----l~ 123 (318)
T 4ggc_A 89 --------------------------------------AEVQLWDVQQQKRLRN--MTSH-SARVGSLSWNSYI----LS 123 (318)
T ss_dssp --------------------------------------SEEEEEETTTTEEEEE--EECC-SSCEEEEEEETTE----EE
T ss_pred --------------------------------------CcEEEeecCCceeEEE--ecCc-cceEEEeecCCCE----EE
Confidence 5789999999876543 1111 2234567888875 55
Q ss_pred EEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCC
Q 003363 315 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSS 394 (826)
Q Consensus 315 f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~ 394 (826)
..+ ....+..++... .......+..+........|+++|+.|+..+.+
T Consensus 124 s~~---------------~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-- 171 (318)
T 4ggc_A 124 SGS---------------RSGHIHHHDVRV---------------AEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-- 171 (318)
T ss_dssp EEE---------------TTSEEEEEETTS---------------SSCEEEEEECCSSCEEEEEECTTSSEEEEEETT--
T ss_pred EEe---------------cCCceEeeecCC---------------CceeEEEEcCccCceEEEEEcCCCCEEEEEecC--
Confidence 444 222455555410 222334555666677888999999988766644
Q ss_pred CCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEE
Q 003363 395 VDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVN 474 (826)
Q Consensus 395 ~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vd 474 (826)
..|.+||+.+++.......... . ....+....|++++..++..........+..+|
T Consensus 172 ---------~~i~iwd~~~~~~~~~~~~~~~-----------~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd 227 (318)
T 4ggc_A 172 ---------NLVNVWPSAPGEGGWVPLQTFT-----------Q----HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWN 227 (318)
T ss_dssp ---------SCEEEEESSCBTTBSCCSEEEC-----------C----CCSCEEEEEECTTSTTEEEEEECTTTCEEEEEE
T ss_pred ---------cceeEEECCCCcccccceeeec-----------c----cCCceEEEEecCCCCcEEEEEecCCCCEEEEEe
Confidence 3588899887654221111100 0 011233556788877777666655556677778
Q ss_pred CCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 475 VSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 475 l~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
..++...........+....++++++.+++.....+. .|.+.++.+
T Consensus 228 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~--~i~iwd~~~ 273 (318)
T 4ggc_A 228 VCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQN--QLVIWKYPT 273 (318)
T ss_dssp TTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTC--CEEEEETTT
T ss_pred cccccccccccceeeeeeeeecccccceEEEEEcCCC--EEEEEECCC
Confidence 8888777666665566677889999988776644332 366666543
No 393
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.88 E-value=3.5e-07 Score=97.24 Aligned_cols=201 Identities=12% Similarity=0.065 Sum_probs=115.2
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCC-ccccccCCCcccceeecCCCCeEEEEeecCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQT-VHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~-~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~ 230 (826)
..+....|||+ .||.....+ .+.+|+ .+....+..+... ..+.| ..++|||||+.||..+.+
T Consensus 15 ~~v~~~~~s~~--~las~~~D~-----~i~lw~~~~~~~~~~~~~~~~~h~~~v------~~v~~sp~~~~las~s~D-- 79 (330)
T 2hes_X 15 EKIWSFDFSQG--ILATGSTDR-----KIKLVSVKYDDFTLIDVLDETAHKKAI------RSVAWRPHTSLLAAGSFD-- 79 (330)
T ss_dssp SCEEEEEEETT--EEEEEESSS-----CEEEEECSSSCCEEEEEECTTCCCSCE------EEEEECTTSSEEEEEETT--
T ss_pred CceeeeccCCC--EEEEEcCCC-----EEEEEEecCCCeEEEEEEecCCccCCE------EEEEECCCCCEEEEEeCC--
Confidence 34788899988 666654432 456662 2222222222122 33334 789999999998887544
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCC-------c-eEeccCCCCCCccceEEE
Q 003363 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSG-------E-VQAVKGIPKSLSVGQVVW 302 (826)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g-------~-~~~l~~~~~~~~~~~~~w 302 (826)
..|.+||+..+ + ...+ ......+..++|
T Consensus 80 ------------------------------------------~~v~iw~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~ 115 (330)
T 2hes_X 80 ------------------------------------------STVSIWAKEESADRTFEMDLLAII--EGHENEVKGVAW 115 (330)
T ss_dssp ------------------------------------------SCEEEEEC-------CCCEEEEEE--C----CEEEEEE
T ss_pred ------------------------------------------CcEEEEEcccCcCccccceeEEEE--cCCCCcEEEEEE
Confidence 35677776432 1 1223 223346778999
Q ss_pred eeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCC-CcceecCCCCccccCceecC
Q 003363 303 APLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSED-LPVVNLTESISSAFFPRFSP 381 (826)
Q Consensus 303 SPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~Lt~~~~~~~~p~~Sp 381 (826)
+|||+. |+..+ .+..|.++|+... ... .....+..+...+....|+|
T Consensus 116 sp~g~~----las~s---------------~D~~v~iwd~~~~-------------~~~~~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 116 SNDGYY----LATCS---------------RDKSVWIWETDES-------------GEEYECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp CTTSCE----EEEEE---------------TTSCEEEEECCTT-------------CCCCEEEEEECCCSSCEEEEEECS
T ss_pred CCCCCE----EEEEe---------------CCCEEEEEeccCC-------------CCCeEEEEEeccCCCceEEEEECC
Confidence 999997 77666 2346788887210 001 12345666777788999999
Q ss_pred CCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccC--CCEEE
Q 003363 382 DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD--GCTML 459 (826)
Q Consensus 382 DG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~D--g~~l~ 459 (826)
||+.|+..+.+ ..|.+||..++... .+..+.. +...+..+.|+|+ +. ++
T Consensus 164 ~~~~l~s~s~D-----------~~i~iW~~~~~~~~--------~~~~~~~---------h~~~v~~~~~~~~~~~~-~l 214 (330)
T 2hes_X 164 SEALLASSSYD-----------DTVRIWKDYDDDWE--------CVAVLNG---------HEGTVWSSDFDKTEGVF-RL 214 (330)
T ss_dssp SSSEEEEEETT-----------SCEEEEEEETTEEE--------EEEEECC---------CSSCEEEEEECCSSSSC-EE
T ss_pred CCCEEEEEcCC-----------CeEEEEECCCCCee--------EEEEccC---------CCCcEEEEEecCCCCee-EE
Confidence 99988876654 34777776543211 1111100 1113346678998 44 44
Q ss_pred EEEEeCCeEEEEEEE
Q 003363 460 LSSIWGSSQVIISVN 474 (826)
Q Consensus 460 ~~~~~~~~~~l~~vd 474 (826)
++...++...||.++
T Consensus 215 ~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 215 CSGSDDSTVRVWKYM 229 (330)
T ss_dssp EEEETTSCEEEEEEE
T ss_pred EEEeCCCeEEEEEec
Confidence 566667777787665
No 394
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.88 E-value=2.7e-09 Score=121.91 Aligned_cols=118 Identities=16% Similarity=0.137 Sum_probs=81.7
Q ss_pred CCCCcEEEEEcCCCCCCCCccc-hHHHHHHH-HCCcEEEEECCCC-CCCCchhhh---h-cCCCCCCcchHHHHHHHHHH
Q 003363 589 CSCDPLIVVLHGGPHSVSLSSY-SKSLAFLS-SVGYSLLIVNYRG-SLGFGEEAL---Q-SLPGKVGSQDVNDVLTAIDH 661 (826)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~-~~~~~~la-~~G~~Vl~~d~rG-~~g~G~~~~---~-~~~~~~~~~~~~D~~~~i~~ 661 (826)
.++.|+||++|||++....... ......|+ ..|++|+.+|||. .-||..... . ......+...+.|+.++++|
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al~w 217 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNADIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAIRW 217 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCCHHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCchhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHHHH
Confidence 4678999999999876544321 11234555 4799999999993 222221100 0 01112234458999999999
Q ss_pred HHHcC---CCCCCcEEEEEecchHHHHHHHHHhC--CCceeEEEecCCcc
Q 003363 662 VIDMG---LANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLC 706 (826)
Q Consensus 662 l~~~~---~~d~~rv~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~ 706 (826)
+.++. ..|+++|.|+|+|+||.++..++... ..+|+++|+.+|..
T Consensus 218 v~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 218 LKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 99862 36999999999999999998877642 36899999998853
No 395
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.87 E-value=5.7e-09 Score=108.47 Aligned_cols=102 Identities=17% Similarity=0.231 Sum_probs=78.3
Q ss_pred CCCcEEEEEcCCCCCCC---CccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcC
Q 003363 590 SCDPLIVVLHGGPHSVS---LSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 666 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~---~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 666 (826)
+..|.||++||...... ...|....+.|.++||.|+++|++| +|.+. ...+++.+.++.+++.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~~~~~L~~~G~~v~~~d~~g---~g~s~----------~~~~~~~~~i~~~~~~- 70 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQ---LDTSE----------VRGEQLLQQVEEIVAL- 70 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTTHHHHHHHTTCCEEEECCCS---SSCHH----------HHHHHHHHHHHHHHHH-
T ss_pred CCCCeEEEeCCCCCCccccccccHHHHHHHHHhCCCEEEEEeCCC---CCCch----------hhHHHHHHHHHHHHHH-
Confidence 44678999999765431 2367778889999999999999998 43332 2345666666666554
Q ss_pred CCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCcc
Q 003363 667 LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (826)
Q Consensus 667 ~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 706 (826)
++.++|.|+|||+||.++..++.++|++++++|++++..
T Consensus 71 -~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p~ 109 (285)
T 1ex9_A 71 -SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPH 109 (285)
T ss_dssp -HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred -hCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCCC
Confidence 245789999999999999999999999999999998853
No 396
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.85 E-value=8.6e-10 Score=125.39 Aligned_cols=127 Identities=20% Similarity=0.204 Sum_probs=85.4
Q ss_pred EEEEEEecCCCC-CCCCCcEEEEEcCCCCCCCCcc-------chHHHHHHH-HCCcEEEEECCCCC-CCCchhhhhcCCC
Q 003363 576 FEAIFVSSSHKK-DCSCDPLIVVLHGGPHSVSLSS-------YSKSLAFLS-SVGYSLLIVNYRGS-LGFGEEALQSLPG 645 (826)
Q Consensus 576 l~~~~~~P~~~~-~~~~~P~vv~~HGg~~~~~~~~-------~~~~~~~la-~~G~~Vl~~d~rG~-~g~G~~~~~~~~~ 645 (826)
+...+|.|.... ..++.|+||++|||++...... +......|+ ..|++|+.+|||.. .|+........+
T Consensus 81 l~lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl~~~~~~~p- 159 (579)
T 2bce_A 81 LYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFLSTGDSNLP- 159 (579)
T ss_dssp CEEEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHCCCSSTTCC-
T ss_pred CEEEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCCcCCCCCCC-
Confidence 444577786532 3467899999999886433221 111123454 45799999999942 222211111122
Q ss_pred CCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEEecchHHHHHHHHHh--CCCceeEEEecCCc
Q 003363 646 KVGSQDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQ--APDKFVAAAARNPL 705 (826)
Q Consensus 646 ~~~~~~~~D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~a~~--~p~~~~a~v~~~p~ 705 (826)
+...+.|+.++++|+.++ ...|+++|.|+|+|.||.++..++.. ...+|+++|+.++.
T Consensus 160 --gn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 160 --GNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp --CCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred --CccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 223488999999999885 24799999999999999999887764 34689999998874
No 397
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.85 E-value=9.6e-08 Score=104.40 Aligned_cols=60 Identities=3% Similarity=0.097 Sum_probs=38.7
Q ss_pred cccEEEEeCC--------CCCeEEEEecCCCCCCeEEEEec---CCceeEEEecCCCccccccCCCcccceeecCCCCe-
Q 003363 154 TGASAVVPSP--------SGSKLLVVRNPENESPIQFELWS---QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETL- 221 (826)
Q Consensus 154 ~~~~~~~~SP--------dG~~la~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~- 221 (826)
..+...+||| ||+.||..+.+. .+.+|+ ++........... + ..++|+|++..
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~las~s~D~-----tv~~Wd~~~~~~~~~~~~~~~~----v------~~v~~~p~~~~~ 201 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVIASVGDDC-----TLIIWRLTDEGPILAGYPLSSP----G------ISVQFRPSNPNQ 201 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEEEEEETTS-----EEEEEEEETTEEEEEEEECSSC----E------EEEEEETTEEEE
T ss_pred CceEEEEEccccccccCCCCCEEEEEECCC-----eEEEEECCCCceeeeecCCCCC----c------EEEEECCCCCce
Confidence 4688999998 999999887654 567773 2233333332222 2 78999999875
Q ss_pred EEEEeec
Q 003363 222 IAYVAEE 228 (826)
Q Consensus 222 ia~~~~~ 228 (826)
|+..+.+
T Consensus 202 l~~~~~d 208 (393)
T 4gq1_A 202 LIVGERN 208 (393)
T ss_dssp EEEEETT
T ss_pred EEecCCC
Confidence 5544333
No 398
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.84 E-value=8e-09 Score=109.94 Aligned_cols=211 Identities=11% Similarity=0.068 Sum_probs=115.3
Q ss_pred CCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHH-HHHHHHcCCCC
Q 003363 591 CDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTA-IDHVIDMGLAN 669 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~-i~~l~~~~~~d 669 (826)
..|.|+++||.+.. ...|...+..| ..+|.|+.+|++|. |..... . ..++++.+. ++.+.+. ..
T Consensus 100 ~~~~l~~lhg~~~~--~~~~~~l~~~L-~~~~~v~~~d~~g~---~~~~~~--~-----~~~~~~a~~~~~~i~~~--~~ 164 (329)
T 3tej_A 100 NGPTLFCFHPASGF--AWQFSVLSRYL-DPQWSIIGIQSPRP---NGPMQT--A-----ANLDEVCEAHLATLLEQ--QP 164 (329)
T ss_dssp SSCEEEEECCTTSC--CGGGGGGGGTS-CTTCEEEEECCCTT---TSHHHH--C-----SSHHHHHHHHHHHHHHH--CS
T ss_pred CCCcEEEEeCCccc--chHHHHHHHhc-CCCCeEEEeeCCCC---CCCCCC--C-----CCHHHHHHHHHHHHHHh--CC
Confidence 45789999997655 44666666666 56899999999984 333211 1 134444433 3333333 12
Q ss_pred CCcEEEEEecchHHHHHHHHHh---CCCceeEEEecCCccchhhhccC-----CCCCCchhhhhccCcC-CccCCCCCCh
Q 003363 670 PSKVTVVGGSHGGFLTTHLIGQ---APDKFVAAAARNPLCNLALMVGT-----TDIPDWCYVESYGSKG-KDSFTESPSV 740 (826)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~a~~---~p~~~~a~v~~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~ 740 (826)
..++.|+|||+||.++..++.+ +|+.+..+++..+.......... .+.............. ........ .
T Consensus 165 ~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 243 (329)
T 3tej_A 165 HGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGSTS-T 243 (329)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCCTHHHHTC-----CCCCTHHHHHHHHHHHHHHTTCCCSC-C
T ss_pred CCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCCCCccccccccccccChhhHHHHHHHHHHHHHhcccccc-H
Confidence 3689999999999999999988 99999999988876543211100 0000000000000000 00000001 1
Q ss_pred hhHHHH----hhc-C--cccccCCCCCcEEEEEeCCCCCCCcHHHHHHHHHHHhCCCCEEEEEeCCCCCC-CCCCCCHHH
Q 003363 741 EDLTRF----HSK-S--PISHISKVKTPTIFLLGAQDLRVPVSNGLQYARALREKGVETKVIVFPNDVHG-IERPQSDFE 812 (826)
Q Consensus 741 ~~~~~~----~~~-s--p~~~~~~i~~PvLii~G~~D~~vp~~~~~~~~~~l~~~g~~~~~~~~p~~~H~-~~~~~~~~~ 812 (826)
+....+ ... . .......+.+|++++.|+.|..++......+.+.. ..++++.+++ +|. +..+.....
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~d~~~~~~~~~~w~~~~----~~~~~~~v~g-~H~~~~~~~~~~~ 318 (329)
T 3tej_A 244 ELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWI----AELDIYRQDC-AHVDIISPGTFEK 318 (329)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEEEGGGCCTTCCHHHHHTTTE----EEEEEEEESS-CGGGGGSTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcCCCeEEEEeccCCCCCCCchhhHHHhc----CCcEEEEecC-ChHHhCCChHHHH
Confidence 111111 100 0 00113456789999999999887765543332222 3588889984 665 444444445
Q ss_pred HHHHHHHHHH
Q 003363 813 SFLNIGLWFK 822 (826)
Q Consensus 813 ~~~~i~~w~~ 822 (826)
....+.+|+.
T Consensus 319 ia~~l~~~L~ 328 (329)
T 3tej_A 319 IGPIIRATLN 328 (329)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 5555555553
No 399
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.83 E-value=1.1e-08 Score=107.64 Aligned_cols=105 Identities=18% Similarity=0.242 Sum_probs=79.7
Q ss_pred CCCcEEEEEcCCCCCCCC----ccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHc
Q 003363 590 SCDPLIVVLHGGPHSVSL----SSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDM 665 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~----~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~ 665 (826)
+..|+||++||....... ..|....+.|+++||.|+++|++|.+. +.. .....+++.+.++.+++.
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~l~~~L~~~G~~V~~~d~~g~g~---s~~-------~~~~~~~l~~~i~~~l~~ 75 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQS---DDG-------PNGRGEQLLAYVKTVLAA 75 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTTHHHHHHHTTCCEEECCCCSSCC---SSS-------TTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHHHHHHHHhCCCEEEEEcCCCCCC---CCC-------CCCCHHHHHHHHHHHHHH
Confidence 456789999997654311 457778899999999999999998443 210 012456666666666655
Q ss_pred CCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCcc
Q 003363 666 GLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (826)
Q Consensus 666 ~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 706 (826)
++.++|.|+|||+||.++..++.++|++++++|++++..
T Consensus 76 --~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p~ 114 (320)
T 1ys1_X 76 --TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPH 114 (320)
T ss_dssp --HCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCT
T ss_pred --hCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCCC
Confidence 345789999999999999999999999999999998754
No 400
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.82 E-value=2.2e-09 Score=122.38 Aligned_cols=124 Identities=22% Similarity=0.290 Sum_probs=85.2
Q ss_pred EEEEEEecCCCC---CCCCCcEEEEEcCCCCCCCCcc-chHHHHHHHHC-CcEEEEECCCCCC-CCchhhhhcCCCCCCc
Q 003363 576 FEAIFVSSSHKK---DCSCDPLIVVLHGGPHSVSLSS-YSKSLAFLSSV-GYSLLIVNYRGSL-GFGEEALQSLPGKVGS 649 (826)
Q Consensus 576 l~~~~~~P~~~~---~~~~~P~vv~~HGg~~~~~~~~-~~~~~~~la~~-G~~Vl~~d~rG~~-g~G~~~~~~~~~~~~~ 649 (826)
+...+|.|.... ..++.|+||++|||++...... +.. ..|+++ |++|+.+|||... ||..... ....+.
T Consensus 112 L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~~~---~~~~~n 186 (574)
T 3bix_A 112 LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLSTGD---QAAKGN 186 (574)
T ss_dssp CEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCCSS---SSCCCC
T ss_pred CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcCCC---CCCCCc
Confidence 445688887531 2357899999999987654432 222 345554 6999999999532 1211100 011234
Q ss_pred chHHHHHHHHHHHHHc---CCCCCCcEEEEEecchHHHHHHHHHhCC---CceeEEEecCC
Q 003363 650 QDVNDVLTAIDHVIDM---GLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNP 704 (826)
Q Consensus 650 ~~~~D~~~~i~~l~~~---~~~d~~rv~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~p 704 (826)
..+.|+.++++|+.++ ...|+++|.|+|+|.||.++..++.... .+|+++|+.+|
T Consensus 187 ~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg 247 (574)
T 3bix_A 187 YGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSG 247 (574)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESC
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcC
Confidence 4589999999999986 2479999999999999999988876543 57999998886
No 401
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.82 E-value=2.7e-09 Score=117.85 Aligned_cols=113 Identities=9% Similarity=-0.015 Sum_probs=81.3
Q ss_pred CCCCcEEEEEcCCCCCCCCccchH-HHHHHHH-CCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcC
Q 003363 589 CSCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMG 666 (826)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~-~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~ 666 (826)
+...|+||++||++... ...|.. .+..|.+ .||.|+++|+||.+...... . .... ....+|+.+.++++.++.
T Consensus 67 ~~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~~--~-~~~~-~~~~~dl~~li~~L~~~~ 141 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQ--A-SYNT-RVVGAEIAFLVQVLSTEM 141 (452)
T ss_dssp CTTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHHH--H-HHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechhcccCchhH--h-HhhH-HHHHHHHHHHHHHHHHhc
Confidence 34568999999977653 245665 4566665 49999999999944322110 0 0000 112567788888887654
Q ss_pred CCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCcc
Q 003363 667 LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (826)
Q Consensus 667 ~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 706 (826)
.++.+++.|+|||+||.+++.++.++|++++++++.+|..
T Consensus 142 g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 142 GYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 4667899999999999999999999999999999988754
No 402
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.82 E-value=1.1e-06 Score=94.94 Aligned_cols=84 Identities=10% Similarity=0.065 Sum_probs=51.5
Q ss_pred ceecCCCCEEEEEeccCCCCCCCCc-ccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCC
Q 003363 377 PRFSPDGKFLVFLSAKSSVDSGAHS-ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDG 455 (826)
Q Consensus 377 p~~SpDG~~l~f~s~~~~~~~g~~~-~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg 455 (826)
..++|||++|+....... .+.|. ...+|+++|+.+++.. ..+.... ....+.|+|||
T Consensus 272 ~~~s~d~~~lyV~~~~~~--~~~~~~~~~~V~VID~~t~~vv----------~~i~~g~----------~p~~i~~s~Dg 329 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQS--AWKLHAAAKEVTSVTGLVGQTS----------SQISLGH----------DVDAISVAQDG 329 (373)
T ss_pred EEECCCCCEEEEEeccCC--cccccCCCCeEEEEECCCCEEE----------EEEECCC----------CcCeEEECCCC
Confidence 568899988765443211 01111 2358999998885542 1111110 23477899999
Q ss_pred CEEEEEEEeCCeEEEEEEECCCCcEEEe
Q 003363 456 CTMLLSSIWGSSQVIISVNVSSGELLRI 483 (826)
Q Consensus 456 ~~l~~~~~~~~~~~l~~vdl~tg~~~~l 483 (826)
+++++.... +...|..+|++++++...
T Consensus 330 ~~~l~v~~~-~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 330 GPDLYALSA-GTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CeEEEEEcC-CCCeEEEEECCCCCEEee
Confidence 966565442 345789999999887765
No 403
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.80 E-value=1.2e-07 Score=103.73 Aligned_cols=260 Identities=14% Similarity=0.066 Sum_probs=124.9
Q ss_pred EEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCcee--EEEecCCCccccccCCCcccceeecC--------CCCeEEE
Q 003363 157 SAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLE--KEFHVPQTVHGSVYADGWFEGISWNS--------DETLIAY 224 (826)
Q Consensus 157 ~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~--~~~~~~~~~~g~v~~~~~~~~~~wSP--------Dg~~ia~ 224 (826)
....++|+++.||..+.+. .+.+|+ .++.. +......+..+.| ..++|+| ||+.||.
T Consensus 93 ~~~~~~~~~~~las~~~d~-----~v~lw~~~~~~~~~~~~~~~~~gH~~~v------~~v~~~p~~~~~~~~d~~~las 161 (393)
T 4gq1_A 93 NVNSSPVYSLFLACVCQDN-----TVRLIITKNETIITQHVLGGKSGHHNFV------NDIDIADVYSADNRLAEQVIAS 161 (393)
T ss_dssp ----CCEEEEEEEEEETTS-----CEEEEEEETTEEEEEEEECTTTSCSSCE------EEEEEEEEECTTCSEEEEEEEE
T ss_pred ceeecCCCCCEEEEEeCCC-----cEEEEECCCCccceeeeecccCCCCCce------EEEEEccccccccCCCCCEEEE
Confidence 3445677787887766543 355662 23222 2233334555555 8999998 9999998
Q ss_pred EeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCce-EeccCCCCCCccceEEEe
Q 003363 225 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVKGIPKSLSVGQVVWA 303 (826)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~-~~l~~~~~~~~~~~~~wS 303 (826)
.+.+ ..|.+||+.++.. ..+ ......+..++|+
T Consensus 162 ~s~D--------------------------------------------~tv~~Wd~~~~~~~~~~--~~~~~~v~~v~~~ 195 (393)
T 4gq1_A 162 VGDD--------------------------------------------CTLIIWRLTDEGPILAG--YPLSSPGISVQFR 195 (393)
T ss_dssp EETT--------------------------------------------SEEEEEEEETTEEEEEE--EECSSCEEEEEEE
T ss_pred EECC--------------------------------------------CeEEEEECCCCceeeee--cCCCCCcEEEEEC
Confidence 7654 5789999876653 334 3344567789999
Q ss_pred eCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCC---------CCCcceecCCCCccc
Q 003363 304 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS---------EDLPVVNLTESISSA 374 (826)
Q Consensus 304 PDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~---------~~~~~~~Lt~~~~~~ 374 (826)
|++.. ++.++. .+..|.++|+..+.............. ..........+...+
T Consensus 196 p~~~~----~l~~~~--------------~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 196 PSNPN----QLIVGE--------------RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp TTEEE----EEEEEE--------------TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred CCCCc----eEEecC--------------CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 99875 555542 223577777632110000000000000 000001112233345
Q ss_pred cCceec-CCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCccc-ccCCCCCCccc
Q 003363 375 FFPRFS-PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGL-YSSSILSNPWL 452 (826)
Q Consensus 375 ~~p~~S-pDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~-~~~~~~~~~ws 452 (826)
....|+ |||++|+-.+.+ ..+.+||+.++...........-+..+....+ ..+. -........|.
T Consensus 258 ~~v~~~~~dg~~l~s~s~d-----------~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 324 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKS-----------GAWLRWNLFANNDYNEISDSTMKLGPKNLLPN--VQGISLFPSLLGACPH 324 (393)
T ss_dssp SEEEEETTTTCEEEEECTT-----------SEEEEEEC-------------------CCSCS--EEEECSSCCSSCCEEC
T ss_pred eeeeeecCCCCEEEEEeCC-----------CCEEEEECccCCCCceEeeecCccccEEEccc--cccccccCcceeEEEc
Confidence 566775 899998766543 45888888765442211111100000000000 0000 00011233343
Q ss_pred c-CCCEEEEEEEeCCeEEEEEEECCCCcEEEe-cCCCCCeeeEEEeecCCEEEEEE
Q 003363 453 S-DGCTMLLSSIWGSSQVIISVNVSSGELLRI-TPAESNFSWSLLTLDGDNIIAVS 506 (826)
Q Consensus 453 ~-Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~l-t~~~~~~~~~~~s~dg~~l~~~~ 506 (826)
+ .++.++++...++ .|..+|..+++.... ......+....|+|||+.|+...
T Consensus 325 ~~~~~~~~~sgs~Dg--~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as 378 (393)
T 4gq1_A 325 PRYMDYFATAHSQHG--LIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIAT 378 (393)
T ss_dssp SSCTTEEEEEETTTT--EEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCCEEEEEECCCC--EEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 3 4444544433334 456668877765443 33344566678999999876554
No 404
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.80 E-value=1.1e-08 Score=108.20 Aligned_cols=122 Identities=18% Similarity=0.160 Sum_probs=86.4
Q ss_pred EEEEEEecCCCCCCCCCcEEEEEcCCCCCC--------CCccc----hHHHHHHHHCCcE---EEEECCCCCCCCchhhh
Q 003363 576 FEAIFVSSSHKKDCSCDPLIVVLHGGPHSV--------SLSSY----SKSLAFLSSVGYS---LLIVNYRGSLGFGEEAL 640 (826)
Q Consensus 576 l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~--------~~~~~----~~~~~~la~~G~~---Vl~~d~rG~~g~G~~~~ 640 (826)
+.|....|. .. ..+.||++||..... ....| ...+..|.++||. |+++|++| +|.+..
T Consensus 28 ~gG~~~~p~---~~-~~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~l~~~L~~~Gy~~~~V~~~D~~g---~G~S~~ 100 (342)
T 2x5x_A 28 YGGFGGGSC---TA-TKTPVIFIHGNGDNAISFDMPPGNVSGYGTPARSVYAELKARGYNDCEIFGVTYLS---SSEQGS 100 (342)
T ss_dssp SCEEECCSS---CC-CSCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSCHHHHHHHTTCCTTSEEEECCSC---HHHHTC
T ss_pred cCcccCCCC---CC-CCCeEEEECCcCCCcccccccccccccccccHHHHHHHHHhCCCCCCeEEEEeCCC---CCccCC
Confidence 345555554 22 334589999966532 13356 6788899999998 99999999 444321
Q ss_pred hcCCCCCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhC--CCceeEEEecCCccc
Q 003363 641 QSLPGKVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQA--PDKFVAAAARNPLCN 707 (826)
Q Consensus 641 ~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~--p~~~~a~v~~~p~~~ 707 (826)
... ........+++.+.++.+++.. ..++|.|+||||||.++..++.++ |++++++|+++|...
T Consensus 101 ~~~-~~~~~~~~~~l~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~~ 166 (342)
T 2x5x_A 101 AQY-NYHSSTKYAIIKTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGIR 166 (342)
T ss_dssp GGG-CCBCHHHHHHHHHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCTT
T ss_pred ccc-cCCHHHHHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCcc
Confidence 110 1112234778888888887763 347899999999999999999988 899999999988654
No 405
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.79 E-value=3.1e-07 Score=101.71 Aligned_cols=205 Identities=10% Similarity=0.094 Sum_probs=120.3
Q ss_pred cccEEEEeCC-CCCeEEEEecCCCCCCeEEEEec--C---Cc-e--eEEEecCCCccccccCCCcccceeecCCCCeEEE
Q 003363 154 TGASAVVPSP-SGSKLLVVRNPENESPIQFELWS--Q---SQ-L--EKEFHVPQTVHGSVYADGWFEGISWNSDETLIAY 224 (826)
Q Consensus 154 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~i~~--~---~~-~--~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~ 224 (826)
..+...+||| ||++||..+..+ .+.+|+ . +. . ....... +.| ..++|+||++.|+.
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~~~~~h~----~~v------~~~~~~~~~~~l~s 128 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQG-----VIKIWNLKEIIVGEVYSSSLTYDCS----STV------TQITMIPNFDAFAV 128 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTS-----EEEEEEHHHHHTTCCCSCSEEEECS----SCE------EEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCc-----eEEEeECcccccCcccceeeeccCC----CCE------EEEEEeCCCCEEEE
Confidence 4588999999 999999876543 566773 2 21 1 1111212 222 89999999999988
Q ss_pred EeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEcc---CCceEecc-C--------CC
Q 003363 225 VAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ---SGEVQAVK-G--------IP 292 (826)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~---~g~~~~l~-~--------~~ 292 (826)
.+.+ ..|.+||++ +++..... + .+
T Consensus 129 ~s~d--------------------------------------------g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~ 164 (437)
T 3gre_A 129 SSKD--------------------------------------------GQIIVLKVNHYQQESEVKFLNCECIRKINLKN 164 (437)
T ss_dssp EETT--------------------------------------------SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGG
T ss_pred EeCC--------------------------------------------CEEEEEEeccccCCceeeccccceeEEEEccC
Confidence 6543 467777773 44332220 0 00
Q ss_pred --CCCccceE--EEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceec
Q 003363 293 --KSLSVGQV--VWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNL 367 (826)
Q Consensus 293 --~~~~~~~~--~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~L 367 (826)
....+..+ .|+||++. |+..+ .+..|+++|+ .+++ ...+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~----l~~~~---------------~d~~i~iwd~-----------------~~~~~~~~~ 208 (437)
T 3gre_A 165 FGKNEYAVRMRAFVNEEKSL----LVALT---------------NLSRVIIFDI-----------------RTLERLQII 208 (437)
T ss_dssp GSSCCCEEEEEEEECSSCEE----EEEEE---------------TTSEEEEEET-----------------TTCCEEEEE
T ss_pred cccccCceEEEEEEcCCCCE----EEEEe---------------CCCeEEEEeC-----------------CCCeeeEEE
Confidence 11122222 26677775 65554 3347899998 4444 4455
Q ss_pred CC--CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCc-c-cceeeeeeeeeccCCCCCccccc
Q 003363 368 TE--SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS-L-EKIVDVIPVVQCAEGDCFPGLYS 443 (826)
Q Consensus 368 t~--~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~-~-~~~~~~~~~~~~~~~~~f~g~~~ 443 (826)
.. +...+....|+|||++|+..+.+ ..|.+||+.++..... . .....+..+.
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~------------- 264 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTR-----------GIIDIWDIRFNVLIRSWSFGDHAPITHVE------------- 264 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETT-----------SCEEEEETTTTEEEEEEBCTTCEEEEEEE-------------
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCC-----------CeEEEEEcCCccEEEEEecCCCCceEEEE-------------
Confidence 44 45678889999999998876654 3589999887543211 1 1111111110
Q ss_pred CCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEe
Q 003363 444 SSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 483 (826)
Q Consensus 444 ~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~l 483 (826)
..+.|++|++.|+ +. ..+..|..+|+.+++....
T Consensus 265 ---~~~~~s~~~~~l~-s~--~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 265 ---VCQFYGKNSVIVV-GG--SSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp ---ECTTTCTTEEEEE-EE--STTEEEEEEETTTTEEEEE
T ss_pred ---eccccCCCccEEE-EE--cCCCcEEEEEcCCCcEEEE
Confidence 1236778886543 33 3445677778888775543
No 406
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.79 E-value=4.3e-09 Score=116.24 Aligned_cols=112 Identities=13% Similarity=0.071 Sum_probs=80.3
Q ss_pred CCCcEEEEEcCCCCCCCCccchH-HHHHHHHC-CcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSSV-GYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 667 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~-~~~~la~~-G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 667 (826)
...|+||++||.+... ...|.. .+..|.++ ||.|+++|+||.+...... . ... -....+|+.+.++++.++..
T Consensus 68 ~~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~~--~-~~~-~~~~~~dl~~~i~~L~~~~g 142 (452)
T 1w52_X 68 SSRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSSGAKAEYTQ--A-VQN-IRIVGAETAYLIQQLLTELS 142 (452)
T ss_dssp TTSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHHH--H-HHH-HHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEecccccccccHH--H-HHh-HHHHHHHHHHHHHHHHHhcC
Confidence 4568999999977553 245655 55667654 9999999999844322110 0 000 01124677788888876533
Q ss_pred CCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCcc
Q 003363 668 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (826)
Q Consensus 668 ~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 706 (826)
++.+++.|+|||+||.++..++.++|++++++++.+|..
T Consensus 143 ~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 143 YNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 567899999999999999999999999999999988754
No 407
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.78 E-value=8.4e-08 Score=101.39 Aligned_cols=229 Identities=11% Similarity=0.064 Sum_probs=125.2
Q ss_pred CCCcceEEEEEeechhhcccceeEEEEEEeecCCCC-ccceeecCCcceecccEEEEeCC--CCCeEEEEecCCCCCCeE
Q 003363 105 NGNGTQAMFSISQPNLLANKRKKFMLSTVISKENEN-SVTFQWAPFPVEMTGASAVVPSP--SGSKLLVVRNPENESPIQ 181 (826)
Q Consensus 105 s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~-~~~lt~~~~~~~~~~~~~~~~SP--dG~~la~~~~~~~~~~~~ 181 (826)
+|||++|+-.. .+..+.++++...... ...|.... ..+...+|+| +|+.|+..+..+ .
T Consensus 22 s~~g~~lasgs---------~D~~v~lwd~~~~~~~~~~~l~gH~-----~~V~~v~~~~~~~~~~l~s~s~D~-----~ 82 (316)
T 3bg1_A 22 DYYGTRLATCS---------SDRSVKIFDVRNGGQILIADLRGHE-----GPVWQVAWAHPMYGNILASCSYDR-----K 82 (316)
T ss_dssp CGGGCEEEEEE---------TTTEEEEEEEETTEEEEEEEEECCS-----SCEEEEEECCGGGSSCEEEEETTS-----C
T ss_pred cCCCCEEEEEe---------CCCeEEEEEecCCCcEEEEEEcCCC-----ccEEEEEeCCCCCCCEEEEEECCC-----E
Confidence 78888775432 3345666666433111 12233232 4588999987 488888776543 4
Q ss_pred EEEec--CCceeEEEecCCCccccccCCCcccceeecCC--CCeEEEEeecCCCCCCCccCCCC-CCCCCCccCCCCCCc
Q 003363 182 FELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSD--ETLIAYVAEEPSPSKPTFSLGST-KGGSSDKDCNSWKGQ 256 (826)
Q Consensus 182 ~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPD--g~~ia~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 256 (826)
+.+|+ .+....+..+ .+..+.| ..++|+|| |+.|+..+.+.....+....... ........+......
T Consensus 83 v~iWd~~~~~~~~~~~~-~~h~~~V------~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~ 155 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEH-AGHDSSV------NSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNA 155 (316)
T ss_dssp EEEECCSSSCCCEEEEE-CCCSSCC------CEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCC
T ss_pred EEEEECCCCcceEEEEc-cCCCCce------EEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcce
Confidence 66773 2322222222 1222233 79999998 78888877766443221111000 001112223333444
Q ss_pred ceeecCC-----------------CccCCCccCceEEEEEccCCc-eEeccC-CCCCCccceEEEeeCC----CCCccEE
Q 003363 257 GDWEEDW-----------------GETYAGKRQPSLFVININSGE-VQAVKG-IPKSLSVGQVVWAPLN----EGLHQYL 313 (826)
Q Consensus 257 ~~~~~d~-----------------g~~~~~~~~~~l~v~d~~~g~-~~~l~~-~~~~~~~~~~~wSPDg----~~~~~~l 313 (826)
..|.++. ....++..+..|.+||+.++. .+.+.. ......+..++|+||+ +. |
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~----l 231 (316)
T 3bg1_A 156 VSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST----I 231 (316)
T ss_dssp CEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCE----E
T ss_pred EEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCce----E
Confidence 5565542 123455567789999987542 222210 2233467889999997 43 5
Q ss_pred EEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCC--cceecCCCCccccCceecCCCCEEEEEec
Q 003363 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVVNLTESISSAFFPRFSPDGKFLVFLSA 391 (826)
Q Consensus 314 vf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~ 391 (826)
+..+ .+..|.++++... ..+ ....+..+...+...+|||||++|+..+.
T Consensus 232 as~s---------------~D~~v~iw~~~~~--------------~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 232 ASCS---------------QDGRVFIWTCDDA--------------SSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp EEEE---------------TTCEEEEEECSST--------------TCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES
T ss_pred EEEc---------------CCCeEEEEEccCc--------------cccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC
Confidence 5544 2336778887210 001 12233344566788999999999987775
Q ss_pred c
Q 003363 392 K 392 (826)
Q Consensus 392 ~ 392 (826)
+
T Consensus 283 D 283 (316)
T 3bg1_A 283 D 283 (316)
T ss_dssp S
T ss_pred C
Confidence 5
No 408
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.76 E-value=1.1e-08 Score=108.30 Aligned_cols=207 Identities=13% Similarity=0.082 Sum_probs=112.6
Q ss_pred EEEEEcC--CCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHH-HHHHHcCCCCC
Q 003363 594 LIVVLHG--GPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAI-DHVIDMGLANP 670 (826)
Q Consensus 594 ~vv~~HG--g~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i-~~l~~~~~~d~ 670 (826)
.|+++|| ++.. ...|...+..|. .+|.|+.+|++|.+. +... ........++++.+.+ +.+.+. .+.
T Consensus 91 ~l~~~hg~g~~~~--~~~~~~l~~~L~-~~~~v~~~d~~G~g~---~~~~--~~~~~~~~~~~~a~~~~~~i~~~--~~~ 160 (319)
T 2hfk_A 91 VLVGCTGTAANGG--PHEFLRLSTSFQ-EERDFLAVPLPGYGT---GTGT--GTALLPADLDTALDAQARAILRA--AGD 160 (319)
T ss_dssp EEEEECCCCTTCS--TTTTHHHHHTTT-TTCCEEEECCTTCCB---C-----CBCCEESSHHHHHHHHHHHHHHH--HTT
T ss_pred cEEEeCCCCCCCc--HHHHHHHHHhcC-CCCceEEecCCCCCC---Cccc--ccCCCCCCHHHHHHHHHHHHHHh--cCC
Confidence 7999997 3322 446777777775 689999999999443 2000 0001112344433332 222222 123
Q ss_pred CcEEEEEecchHHHHHHHHHhC----CCceeEEEecCCccchhhhccCCCCCCch--hhhhccCcCCccCCCCCChhhH-
Q 003363 671 SKVTVVGGSHGGFLTTHLIGQA----PDKFVAAAARNPLCNLALMVGTTDIPDWC--YVESYGSKGKDSFTESPSVEDL- 743 (826)
Q Consensus 671 ~rv~l~G~S~GG~~a~~~a~~~----p~~~~a~v~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~- 743 (826)
.++.|+|||+||.++..+|.++ ++.++++++.++........ ...+. ........ .+.. ......
T Consensus 161 ~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~----~~~~~~~l~~~~~~~---~~~~-~~~~~~~ 232 (319)
T 2hfk_A 161 APVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEP----IEVWSRQLGEGLFAG---ELEP-MSDARLL 232 (319)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHH----HHHTHHHHHHHHHHT---CSSC-CCHHHHH
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhH----HHHHHHHhhHHHHHh---hccc-cchHHHH
Confidence 6799999999999999999876 45688888887643210000 00000 00000000 0000 011111
Q ss_pred --HHHhhcCcccccCCCCCcEEEEEeCCCCCCCcHH-HHHHHHHHHhC-CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 003363 744 --TRFHSKSPISHISKVKTPTIFLLGAQDLRVPVSN-GLQYARALREK-GVETKVIVFPNDVHGIERPQSDFESFLNIGL 819 (826)
Q Consensus 744 --~~~~~~sp~~~~~~i~~PvLii~G~~D~~vp~~~-~~~~~~~l~~~-g~~~~~~~~p~~~H~~~~~~~~~~~~~~i~~ 819 (826)
..+...-.......+++|+|+++| .|..++... ... +... ...++++.++ ++|.....+....+...+.+
T Consensus 233 ~~~~~~~~~~~~~~~~i~~Pvl~i~g-~D~~~~~~~~~~~----~~~~~~~~~~~~~v~-g~H~~~~~e~~~~~~~~i~~ 306 (319)
T 2hfk_A 233 AMGRYARFLAGPRPGRSSAPVLLVRA-SEPLGDWQEERGD----WRAHWDLPHTVADVP-GDHFTMMRDHAPAVAEAVLS 306 (319)
T ss_dssp HHHHHHHHHHSCCCCCCCSCEEEEEE-SSCSSCCCGGGCC----CSCCCSSCSEEEEES-SCTTHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcCCCEEEEEc-CCCCCCccccccc----hhhcCCCCCEEEEeC-CCcHHHHHHhHHHHHHHHHH
Confidence 111110000123678899999999 999888754 222 2221 2247888998 58874332255678888999
Q ss_pred HHHHH
Q 003363 820 WFKKY 824 (826)
Q Consensus 820 w~~~~ 824 (826)
|+.+.
T Consensus 307 ~L~~~ 311 (319)
T 2hfk_A 307 WLDAI 311 (319)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99764
No 409
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.76 E-value=8.2e-08 Score=108.68 Aligned_cols=162 Identities=7% Similarity=-0.051 Sum_probs=96.5
Q ss_pred ceEEEEEccCCceE------------eccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEE
Q 003363 273 PSLFVININSGEVQ------------AVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (826)
Q Consensus 273 ~~l~v~d~~~g~~~------------~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (826)
..|.+||+.+++.. .+ ......+..++|+|++ . |+..+ .+..|.++
T Consensus 235 gtvrlWd~~~~~~~~~~~~~~~~p~~~l--~~h~~~v~sv~~s~~~-~----lasgs---------------~DgtV~lW 292 (524)
T 2j04_B 235 GTINFLEIIDNATDVHVFKMCEKPSLTL--SLADSLITTFDFLSPT-T----VVCGF---------------KNGFVAEF 292 (524)
T ss_dssp SCEEEEECCCCSSSSSEEECCCSCSEEE--CCTTTCEEEEEESSSS-E----EEEEE---------------TTSEEEEE
T ss_pred CeEEEEEcCCCccccccceeecCceEEE--EcCCCCEEEEEecCCC-e----EEEEe---------------CCCEEEEE
Confidence 45777887665321 22 2233467789999864 4 66655 33478899
Q ss_pred EcccccchhhhhhhhcCCCCCC-c-ceecCCCCccccCc--eecCCC-CEEEEEeccCCCCCCCCcccceEEEEeCCCCC
Q 003363 341 RVSLYKSEASELELKESSSEDL-P-VVNLTESISSAFFP--RFSPDG-KFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~-~-~~~Lt~~~~~~~~p--~~SpDG-~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
|+ .++ . ...+..+...+... .|+||| +.|+-.+.+ ..|.+||+.++.
T Consensus 293 D~-----------------~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D-----------~tvklWD~~~~~ 344 (524)
T 2j04_B 293 DL-----------------TDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD-----------GYFYIFNPKDIA 344 (524)
T ss_dssp ET-----------------TBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT-----------SEEEEECGGGHH
T ss_pred EC-----------------CCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC-----------CeEEEEECCCCC
Confidence 98 433 2 23456666677777 689998 666655544 468899986643
Q ss_pred CCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcE-EEecCCCCCeeeEE
Q 003363 416 NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWSL 494 (826)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~-~~lt~~~~~~~~~~ 494 (826)
......+. .. ...+..++|+||++.++ ++..++ .+..+|+.++.. ..+......+....
T Consensus 345 ~~~~~~~~--------------~~---~~~v~~v~fsp~~~~l~-s~~~d~--tv~lwd~~~~~~~~~l~gH~~~V~sva 404 (524)
T 2j04_B 345 TTKTTVSR--------------FR---GSNLVPVVYCPQIYSYI-YSDGAS--SLRAVPSRAAFAVHPLVSRETTITAIG 404 (524)
T ss_dssp HHCEEEEE--------------CS---CCSCCCEEEETTTTEEE-EECSSS--EEEEEETTCTTCCEEEEECSSCEEEEE
T ss_pred cccccccc--------------cc---cCcccceEeCCCcCeEE-EeCCCC--cEEEEECcccccceeeecCCCceEEEE
Confidence 21100000 00 01245678999998654 333333 456668877764 44555555566678
Q ss_pred EeecCCEEEE
Q 003363 495 LTLDGDNIIA 504 (826)
Q Consensus 495 ~s~dg~~l~~ 504 (826)
|+|++..|+.
T Consensus 405 ~Sp~g~~l~S 414 (524)
T 2j04_B 405 VSRLHPMVLA 414 (524)
T ss_dssp CCSSCCBCEE
T ss_pred eCCCCCeEEE
Confidence 8998876543
No 410
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.75 E-value=2e-06 Score=91.76 Aligned_cols=156 Identities=12% Similarity=0.043 Sum_probs=98.4
Q ss_pred ccEEEEeCC--CCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCC
Q 003363 155 GASAVVPSP--SGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (826)
Q Consensus 155 ~~~~~~~SP--dG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~ 230 (826)
.+...+|+| +|++++..+..+ .+.+|+ .++..+.... ..... +..++|+|||+.||..+.
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~--~~~~~------i~~~~~~pdg~~lasg~~--- 190 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRG-----TIGFQSYEDDSQYIVHSA--KSDVE------YSSGVLHKDSLLLALYSP--- 190 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTC-----CEEEEESSSSCEEEEECC--CSSCC------CCEEEECTTSCEEEEECT---
T ss_pred CEEEEEcCCCCCCCEEEEEeCCC-----cEEEEECCCCcEEEEEec--CCCCc------eEEEEECCCCCEEEEEcC---
Confidence 488899999 999998876543 456663 3333332221 11112 278999999998887543
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceE--eccCCCCCCccceEEEeeCCCC
Q 003363 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ--AVKGIPKSLSVGQVVWAPLNEG 308 (826)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~--~l~~~~~~~~~~~~~wSPDg~~ 308 (826)
+..|.+||+.+++.. .+. ......+..++|+|||+.
T Consensus 191 -----------------------------------------dg~i~iwd~~~~~~~~~~~~-~~h~~~v~~l~fs~~g~~ 228 (343)
T 3lrv_A 191 -----------------------------------------DGILDVYNLSSPDQASSRFP-VDEEAKIKEVKFADNGYW 228 (343)
T ss_dssp -----------------------------------------TSCEEEEESSCTTSCCEECC-CCTTSCEEEEEECTTSSE
T ss_pred -----------------------------------------CCEEEEEECCCCCCCccEEe-ccCCCCEEEEEEeCCCCE
Confidence 257999999988754 442 113557889999999997
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcc-eecCC---CCccc--cCceecCC
Q 003363 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPV-VNLTE---SISSA--FFPRFSPD 382 (826)
Q Consensus 309 ~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt~---~~~~~--~~p~~SpD 382 (826)
|+..+. . .|.++|+ ..+.. ..+.. +.... ....|+||
T Consensus 229 ----l~s~~~---------------~-~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (343)
T 3lrv_A 229 ----MVVECD---------------Q-TVVCFDL-----------------RKDVGTLAYPTYTIPEFKTGTVTYDIDDS 271 (343)
T ss_dssp ----EEEEES---------------S-BEEEEET-----------------TSSTTCBSSCCCBC-----CCEEEEECTT
T ss_pred ----EEEEeC---------------C-eEEEEEc-----------------CCCCcceeecccccccccccceEEEECCC
Confidence 766651 1 6888898 33322 22222 21222 24899999
Q ss_pred CCEEEEEeccCCCCCCCCcccceEEEEeCCCCC
Q 003363 383 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 383 G~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
|++|+..+..+ ..+.+|++..+.
T Consensus 272 g~~l~~~s~~d----------~~i~v~~~~~~~ 294 (343)
T 3lrv_A 272 GKNMIAYSNES----------NSLTIYKFDKKT 294 (343)
T ss_dssp SSEEEEEETTT----------TEEEEEEECTTT
T ss_pred CCEEEEecCCC----------CcEEEEEEcccc
Confidence 99998766522 357777776543
No 411
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.75 E-value=1e-06 Score=91.92 Aligned_cols=253 Identities=10% Similarity=-0.020 Sum_probs=135.6
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (826)
.+.++|||+.+.++... ...|+.++. .++ ...+.... ......+++|||+.++.. . +...
T Consensus 32 g~~~d~~g~~l~~~~~~--------~~~i~~~~~--~~~-~~~~~~~~-----~~~~~l~~~~dg~l~v~~-~---~~~~ 91 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVR--------QNRTWAWSD--DGQ-LSPEMHPS-----HHQNGHCLNKQGHLIACS-H---GLRR 91 (296)
T ss_dssp EEEEEGGGTEEEEEEGG--------GTEEEEEET--TSC-EEEEESSC-----SSEEEEEECTTCCEEEEE-T---TTTE
T ss_pred CCeEeCCCCEEEEEeCC--------CCEEEEEEC--CCC-eEEEECCC-----CCcceeeECCCCcEEEEe-c---CCCe
Confidence 34557888877665322 235666654 222 33333222 346788999999854432 2 1234
Q ss_pred EEEEec-CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeec-CCCCCCCccCCCCCCCCCCccCCCCCCcce
Q 003363 181 QFELWS-QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE-PSPSKPTFSLGSTKGGSSDKDCNSWKGQGD 258 (826)
Q Consensus 181 ~~~i~~-~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (826)
++.+.. .++.+.+........ ......+.++|||+ |+++... ..... +..
T Consensus 92 i~~~d~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~~G~-l~vtd~~~g~~~~--~~~-------------------- 143 (296)
T 3e5z_A 92 LERQREPGGEWESIADSFEGKK-----LNSPNDVCLAPDGS-LWFSDPTYGIDKP--EEG-------------------- 143 (296)
T ss_dssp EEEECSTTCCEEEEECEETTEE-----CCCCCCEEECTTSC-EEEEECSHHHHCG--GGS--------------------
T ss_pred EEEEcCCCCcEEEEeeccCCCC-----CCCCCCEEECCCCC-EEEECCccccccc--ccc--------------------
Confidence 665553 666555443211110 00125789999997 4443110 00000 000
Q ss_pred eecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceE
Q 003363 259 WEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 338 (826)
Q Consensus 259 ~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~ 338 (826)
...........||.++.+ ++++.+ .........++|+|||+. | +... ....|+
T Consensus 144 -----~~~~~~~~~~~l~~~~~~-g~~~~~--~~~~~~~~gi~~s~dg~~----l-v~~~--------------~~~~i~ 196 (296)
T 3e5z_A 144 -----YGGEMELPGRWVFRLAPD-GTLSAP--IRDRVKPNGLAFLPSGNL----L-VSDT--------------GDNATH 196 (296)
T ss_dssp -----SCCCCCSSSCEEEEECTT-SCEEEE--ECCCSSEEEEEECTTSCE----E-EEET--------------TTTEEE
T ss_pred -----ccccccCCCcEEEEECCC-CCEEEe--ecCCCCCccEEECCCCCE----E-EEeC--------------CCCeEE
Confidence 000000123579999987 777666 333335568999999997 6 4431 223788
Q ss_pred EEEcccccchhhhhhhhcCCCCCCcc----eecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCC
Q 003363 339 AVRVSLYKSEASELELKESSSEDLPV----VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (826)
Q Consensus 339 ~~d~~~~~~~~~~~~~~~~~~~~~~~----~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~ 414 (826)
++++. .++.. +.+....+......+++||+ | |++. . ..|+++|.++
T Consensus 197 ~~~~~----------------~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l-~v~~-~----------~~v~~~~~~g- 246 (296)
T 3e5z_A 197 RYCLN----------------ARGETEYQGVHFTVEPGKTDGLRVDAGGL-I-WASA-G----------DGVHVLTPDG- 246 (296)
T ss_dssp EEEEC----------------SSSCEEEEEEEECCSSSCCCSEEEBTTSC-E-EEEE-T----------TEEEEECTTS-
T ss_pred EEEEC----------------CCCcCcCCCeEeeCCCCCCCeEEECCCCC-E-EEEc-C----------CeEEEECCCC-
Confidence 88872 13333 22222233456789999998 3 3332 2 3589998753
Q ss_pred CCCCcccceeeeeeeeeccCCCCCcccccCCCCCCcc-ccCCCEEEEEEEeCCeEEEEEEECCCCcEEE
Q 003363 415 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPW-LSDGCTMLLSSIWGSSQVIISVNVSSGELLR 482 (826)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~w-s~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~ 482 (826)
+.. ..+..+. .+..++| ++|++.|++++. ..||++++.+++++.
T Consensus 247 ~~~----------~~~~~~~----------~~~~~~f~~~d~~~L~v~t~----~~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 247 DEL----------GRVLTPQ----------TTSNLCFGGPEGRTLYMTVS----TEFWSIETNVRGLEH 291 (296)
T ss_dssp CEE----------EEEECSS----------CCCEEEEESTTSCEEEEEET----TEEEEEECSCCBCCC
T ss_pred CEE----------EEEECCC----------CceeEEEECCCCCEEEEEcC----CeEEEEEcccccccc
Confidence 211 1111110 1235677 589998887753 269999998877653
No 412
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.74 E-value=7.5e-07 Score=95.98 Aligned_cols=99 Identities=14% Similarity=0.053 Sum_probs=57.3
Q ss_pred CceecCCCCEEEEEeccCCCCCCCCc-ccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccC
Q 003363 376 FPRFSPDGKFLVFLSAKSSVDSGAHS-ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 454 (826)
Q Consensus 376 ~p~~SpDG~~l~f~s~~~~~~~g~~~-~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~D 454 (826)
...|+|||++++........ .+.+. ....|+++|+.+++.. ..+... . ...+.|+||
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~-~~~~~~~~~~v~viD~~t~~~v----------~~i~~~----------~-p~~ia~spd 315 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGK-EGTHKFPAAEIWVMDTKTKQRV----------ARIPGR----------D-ALSMTIDQQ 315 (361)
T ss_dssp CEEEETTTTEEEEEEESSCC-TTCTTCCCSEEEEEETTTTEEE----------EEEECT----------T-CCEEEEETT
T ss_pred EEEEecCCCeEEEEEccCCC-cccccCCCceEEEEECCCCcEE----------EEEecC----------C-eeEEEECCC
Confidence 35899999987654331100 01111 2358999998885432 111111 0 346789999
Q ss_pred CCEEEEEEEeCCeEEEEEEECCCC--cEEEe-cCCCCCeeeEEEeecCC
Q 003363 455 GCTMLLSSIWGSSQVIISVNVSSG--ELLRI-TPAESNFSWSLLTLDGD 500 (826)
Q Consensus 455 g~~l~~~~~~~~~~~l~~vdl~tg--~~~~l-t~~~~~~~~~~~s~dg~ 500 (826)
|++||.+ .. ..|..+|++++ ++... ...........++|+|+
T Consensus 316 g~~l~v~-n~---~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 316 RNLMLTL-DG---GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTEEEEE-CS---SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCEEEEe-CC---CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9977644 32 56777799999 65443 22222334557788875
No 413
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.71 E-value=7.2e-08 Score=105.44 Aligned_cols=109 Identities=20% Similarity=0.204 Sum_probs=72.4
Q ss_pred CCcEEEEEcCCCCCCCCccc--hHHHHHHH-HCCcEEEEECCCCCCCCchhhhhc--C---CCCCC----cchHHHHHHH
Q 003363 591 CDPLIVVLHGGPHSVSLSSY--SKSLAFLS-SVGYSLLIVNYRGSLGFGEEALQS--L---PGKVG----SQDVNDVLTA 658 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~~~~--~~~~~~la-~~G~~Vl~~d~rG~~g~G~~~~~~--~---~~~~~----~~~~~D~~~~ 658 (826)
..| ||++|||.+.... .+ ......|+ +.|+.|+++|+||. |++.... . ..+.+ ...++|+...
T Consensus 38 g~P-i~l~~Ggeg~~~~-~~~~~g~~~~lA~~~~~~Vi~~DhRg~---G~S~p~~~~~~~~~~~l~~lt~~q~~~Dl~~~ 112 (446)
T 3n2z_B 38 GGS-ILFYTGNEGDIIW-FCNNTGFMWDVAEELKAMLVFAEHRYY---GESLPFGDNSFKDSRHLNFLTSEQALADFAEL 112 (446)
T ss_dssp TCE-EEEEECCSSCHHH-HHHHCHHHHHHHHHHTEEEEEECCTTS---TTCCTTGGGGGSCTTTSTTCSHHHHHHHHHHH
T ss_pred CCC-EEEEeCCCCcchh-hhhcccHHHHHHHHhCCcEEEEecCCC---CCCCCCCccccccchhhccCCHHHHHHHHHHH
Confidence 346 6667888765211 11 12233343 45899999999994 4442110 0 11111 2347888888
Q ss_pred HHHHHHcC-CCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCC
Q 003363 659 IDHVIDMG-LANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNP 704 (826)
Q Consensus 659 i~~l~~~~-~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p 704 (826)
++++.... .....++.++||||||.++++++.++|+++.++|+.++
T Consensus 113 ~~~l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssa 159 (446)
T 3n2z_B 113 IKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASA 159 (446)
T ss_dssp HHHHHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETC
T ss_pred HHHHHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEecc
Confidence 88887652 22346899999999999999999999999999988664
No 414
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.69 E-value=8.5e-07 Score=98.96 Aligned_cols=271 Identities=8% Similarity=0.005 Sum_probs=151.7
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCcc
Q 003363 160 VPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFS 237 (826)
Q Consensus 160 ~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~ 237 (826)
.++++|++|+..+..+ .+.+|+ .++...... +..+.| ..+.|+||+ .|+..+.+.... .|+
T Consensus 127 ~~~~~~~~l~sgs~dg-----~i~vwd~~~~~~~~~~~---~h~~~V------~~l~~~~~~-~l~s~s~dg~i~--vwd 189 (464)
T 3v7d_B 127 CLQFEDNYVITGADDK-----MIRVYDSINKKFLLQLS---GHDGGV------WALKYAHGG-ILVSGSTDRTVR--VWD 189 (464)
T ss_dssp EEEEETTEEEEEETTS-----CEEEEETTTTEEEEEEC---CCSSCE------EEEEECSTT-EEEEEETTSCEE--EEE
T ss_pred EEEECCCEEEEEcCCC-----cEEEEECCCCcEEEEEe---CCCcCE------EEEEEcCCC-EEEEEeCCCCEE--EEE
Confidence 4455788888766543 466774 333333222 333333 789999999 777777666543 333
Q ss_pred CCCCCCCCCCccCCCCCCcceee--cCCCccCCCccCceEEEEEccCCceEeccCCC--------------------CCC
Q 003363 238 LGSTKGGSSDKDCNSWKGQGDWE--EDWGETYAGKRQPSLFVININSGEVQAVKGIP--------------------KSL 295 (826)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~--~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~--------------------~~~ 295 (826)
............+........|. ++....+++.....|.+||+.+++........ ...
T Consensus 190 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (464)
T 3v7d_B 190 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 269 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC
T ss_pred CCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc
Confidence 22222112222333344444455 33233455556788999999877532210000 000
Q ss_pred ccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccc
Q 003363 296 SVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSA 374 (826)
Q Consensus 296 ~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~ 374 (826)
...-.+++|+++. |+..+ .+..|+.+|+ .+++ ...+..+...+
T Consensus 270 ~~~v~~~~~~~~~----l~~~~---------------~d~~i~vwd~-----------------~~~~~~~~~~~~~~~v 313 (464)
T 3v7d_B 270 MASVRTVSGHGNI----VVSGS---------------YDNTLIVWDV-----------------AQMKCLYILSGHTDRI 313 (464)
T ss_dssp SSCEEEEEEETTE----EEEEE---------------TTSCEEEEET-----------------TTTEEEEEECCCSSCE
T ss_pred cceEEEEcCCCCE----EEEEe---------------CCCeEEEEEC-----------------CCCcEEEEecCCCCCE
Confidence 1112356788886 66555 3347889998 4443 45566667778
Q ss_pred cCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccC
Q 003363 375 FFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 454 (826)
Q Consensus 375 ~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~D 454 (826)
....|+|||++|+..+.+ ..|++||+.+++........ ...+..+.|+
T Consensus 314 ~~~~~~~~~~~l~sg~~d-----------g~i~vwd~~~~~~~~~~~~h-------------------~~~v~~~~~~-- 361 (464)
T 3v7d_B 314 YSTIYDHERKRCISASMD-----------TTIRIWDLENGELMYTLQGH-------------------TALVGLLRLS-- 361 (464)
T ss_dssp EEEEEETTTTEEEEEETT-----------SCEEEEETTTTEEEEEECCC-------------------SSCEEEEEEC--
T ss_pred EEEEEcCCCCEEEEEeCC-----------CcEEEEECCCCcEEEEEeCC-------------------CCcEEEEEEc--
Confidence 889999999998866644 35899998875532111110 1122344565
Q ss_pred CCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 455 GCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 455 g~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
++.| ++...++. |..+|+.+++...............+++++..++... + ..+.+.++.++
T Consensus 362 ~~~l-~s~s~dg~--v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d----g~i~iwd~~~g 422 (464)
T 3v7d_B 362 DKFL-VSAAADGS--IRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-E----NQFNIYNLRSG 422 (464)
T ss_dssp SSEE-EEEETTSE--EEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-T----TEEEEEETTTC
T ss_pred CCEE-EEEeCCCc--EEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-C----CeEEEEECCCC
Confidence 4544 44444444 5566887776554444444445567888888655443 2 35777776554
No 415
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=98.67 E-value=1.5e-08 Score=110.39 Aligned_cols=112 Identities=16% Similarity=0.199 Sum_probs=81.1
Q ss_pred CCCCcEEEEEcCCCCCCCCccchHHHHHHHHCCc---EEEEECCCCCCCCchhh-------------hh-----------
Q 003363 589 CSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGY---SLLIVNYRGSLGFGEEA-------------LQ----------- 641 (826)
Q Consensus 589 ~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~---~Vl~~d~rG~~g~G~~~-------------~~----------- 641 (826)
....|.||++||.+.. ...|...+..|+++|| .|+++|++| +|.+. ..
T Consensus 19 ~~~~ppVVLlHG~g~s--~~~w~~la~~La~~Gy~~~~Via~DlpG---~G~S~~~~~Dv~~~G~~~~~G~n~~p~id~~ 93 (484)
T 2zyr_A 19 AEDFRPVVFVHGLAGS--AGQFESQGMRFAANGYPAEYVKTFEYDT---ISWALVVETDMLFSGLGSEFGLNISQIIDPE 93 (484)
T ss_dssp --CCCCEEEECCTTCC--GGGGHHHHHHHHHTTCCGGGEEEECCCH---HHHHHHTTTSTTTTTGGGHHHHHHGGGSCHH
T ss_pred CCCCCEEEEECCCCCC--HHHHHHHHHHHHHcCCCcceEEEEECCC---CCccccccccccccccccccccccccccccc
Confidence 3456779999997655 5578889999999999 799999998 44320 00
Q ss_pred ----c-CCC--CCCcchHHHHHHHHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCC---CceeEEEecCCccc
Q 003363 642 ----S-LPG--KVGSQDVNDVLTAIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAP---DKFVAAAARNPLCN 707 (826)
Q Consensus 642 ----~-~~~--~~~~~~~~D~~~~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p---~~~~a~v~~~p~~~ 707 (826)
. ... .......+++.+.++.+++.. +.+++.|+||||||.+++.++.++| ++++++|+++|..+
T Consensus 94 ~l~~v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 94 TLDKILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred cccccccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0 000 001123567777788877763 3478999999999999999999987 48999999988654
No 416
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.67 E-value=3.1e-06 Score=89.79 Aligned_cols=254 Identities=6% Similarity=-0.014 Sum_probs=134.9
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (826)
.+.+++||+ +.+.. . ....|+.++. .+++.+.+.... ...+...+++|||+.++......+....
T Consensus 49 ~~~~~~~g~-l~~~~-~-------~~~~i~~~d~--~~~~~~~~~~~~----~~~~~~i~~~~dg~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 49 GLNFDRQGQ-LFLLD-V-------FEGNIFKINP--ETKEIKRPFVSH----KANPAAIKIHKDGRLFVCYLGDFKSTGG 113 (333)
T ss_dssp EEEECTTSC-EEEEE-T-------TTCEEEEECT--TTCCEEEEEECS----SSSEEEEEECTTSCEEEEECTTSSSCCE
T ss_pred CcEECCCCC-EEEEE-C-------CCCEEEEEeC--CCCcEEEEeeCC----CCCcceEEECCCCcEEEEeCCCCCCCce
Confidence 344578887 43432 1 2245666653 333444333211 1357788999999755443322112245
Q ss_pred EEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCccee
Q 003363 181 QFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (826)
Q Consensus 181 ~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (826)
++.++ .++....+.... .. ......+.++|||+ |++.......
T Consensus 114 i~~~d~~~~~~~~~~~~~-~~------~~~~~~i~~d~~g~-l~v~~~~~~~---------------------------- 157 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDL-ST------AYCIDDMVFDSKGG-FYFTDFRGYS---------------------------- 157 (333)
T ss_dssp EEEECTTSCSCEEEECSS-SS------CCCEEEEEECTTSC-EEEEECCCBT----------------------------
T ss_pred EEEEeCCCCEEEEEEccC-cc------CCcccceEECCCCC-EEEEeccccc----------------------------
Confidence 77666 444444333211 11 11236889999996 4444321100
Q ss_pred ecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEE
Q 003363 260 EEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 339 (826)
Q Consensus 260 ~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~ 339 (826)
......||++|.++++.+.+ .........++|+|||+. |++... ....|++
T Consensus 158 ---------~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~i~~~~dg~~----l~v~~~--------------~~~~i~~ 208 (333)
T 2dg1_A 158 ---------TNPLGGVYYVSPDFRTVTPI--IQNISVANGIALSTDEKV----LWVTET--------------TANRLHR 208 (333)
T ss_dssp ---------TBCCEEEEEECTTSCCEEEE--EEEESSEEEEEECTTSSE----EEEEEG--------------GGTEEEE
T ss_pred ---------cCCCceEEEEeCCCCEEEEe--ecCCCcccceEECCCCCE----EEEEeC--------------CCCeEEE
Confidence 01236799999888887766 222224567899999997 766541 1236888
Q ss_pred EEcccccchhhhhhhhcCCCCCCccee--------cCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeC
Q 003363 340 VRVSLYKSEASELELKESSSEDLPVVN--------LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW 411 (826)
Q Consensus 340 ~d~~~~~~~~~~~~~~~~~~~~~~~~~--------Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~ 411 (826)
+|+.. .+..... +.. ........+++||+. |++... ...|+++|.
T Consensus 209 ~d~~~---------------~g~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~l--~v~~~~---------~~~v~~~d~ 261 (333)
T 2dg1_A 209 IALED---------------DGVTIQPFGATIPYYFTG-HEGPDSCCIDSDDNL--YVAMYG---------QGRVLVFNK 261 (333)
T ss_dssp EEECT---------------TSSSEEEEEEEEEEECCS-SSEEEEEEEBTTCCE--EEEEET---------TTEEEEECT
T ss_pred EEecC---------------CCcCcccccceEEEecCC-CCCCCceEECCCCCE--EEEEcC---------CCEEEEECC
Confidence 88721 1111111 111 123456788999983 333321 246899986
Q ss_pred CCCCCCCcccceeeeeeeeeccCC--CCCcccccCCCCCCccccCCCEEEEEEEeC---CeEEEEEEECCC
Q 003363 412 PTNGNFSSLEKIVDVIPVVQCAEG--DCFPGLYSSSILSNPWLSDGCTMLLSSIWG---SSQVIISVNVSS 477 (826)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~--~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~---~~~~l~~vdl~t 477 (826)
.+ +.. ..+..+.. +.+ ..+..++|++||+.|++++..+ ....||++++..
T Consensus 262 ~g-~~~----------~~~~~~~~~~g~~-----~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 262 RG-YPI----------GQILIPGRDEGHM-----LRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp TS-CEE----------EEEECTTGGGTCS-----CBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSS
T ss_pred CC-CEE----------EEEEcCCCccccc-----cCcceEEECCCCCEEEEEeCccCCCCCceEEEEeccc
Confidence 43 211 11111110 000 0234678899998898877653 356788888653
No 417
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.67 E-value=5.6e-06 Score=88.45 Aligned_cols=90 Identities=14% Similarity=0.032 Sum_probs=55.5
Q ss_pred cCceecCCCCEEEEEeccCCCCCCCCcc-cceEEEEeCCCCCCCC-cccceeeeeeeeeccCCCCCcccccCCCCCCccc
Q 003363 375 FFPRFSPDGKFLVFLSAKSSVDSGAHSA-TDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL 452 (826)
Q Consensus 375 ~~p~~SpDG~~l~f~s~~~~~~~g~~~~-~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws 452 (826)
....++||+++|+....... .|.|.. .++|+++|+.+++... +..+. ....+.++
T Consensus 283 q~~a~~~~~~~lyV~~~~~~--~~~hk~~~~~V~viD~~t~kv~~~i~vg~---------------------~~~~lavs 339 (386)
T 3sjl_D 283 QQVAYHRALDRIYLLVDQRD--EWRHKTASRFVVVLDAKTGERLAKFEMGH---------------------EIDSINVS 339 (386)
T ss_dssp SCEEEETTTTEEEEEEEECC--TTCTTSCEEEEEEEETTTCCEEEEEEEEE---------------------EECEEEEC
T ss_pred ceeeECCCCCeEEEEecccc--ccccCCCCCEEEEEECCCCeEEEEEECCC---------------------CcceEEEC
Confidence 34677899998876554321 133333 3689999998866531 11110 12366789
Q ss_pred cCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCC
Q 003363 453 SDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES 488 (826)
Q Consensus 453 ~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~ 488 (826)
+||+.++|.+. .+...+..+|..++++.+-....+
T Consensus 340 ~D~~~~ly~tn-~~~~~VsViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 340 QDEKPLLYALS-TGDKTLYIHDAESGEELRSVNQLG 374 (386)
T ss_dssp SSSSCEEEEEE-TTTTEEEEEETTTCCEEEEECCCC
T ss_pred CCCCeEEEEEc-CCCCeEEEEECCCCcEEEEecCCC
Confidence 99985555544 345567888999988776544433
No 418
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.65 E-value=3.5e-06 Score=91.70 Aligned_cols=85 Identities=18% Similarity=0.155 Sum_probs=51.3
Q ss_pred CceecCCCCEEEEEeccCCCCCCCCc-ccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccC
Q 003363 376 FPRFSPDGKFLVFLSAKSSVDSGAHS-ATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSD 454 (826)
Q Consensus 376 ~p~~SpDG~~l~f~s~~~~~~~g~~~-~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~D 454 (826)
...++|||++|+...... ..|.|. ..++|.++|..+.+...- ++ .+. ....+.|+||
T Consensus 323 ~va~s~dg~rlyVa~~~~--~~gthk~~s~~VsVID~~T~kvv~~-------I~---vg~----------~P~gia~spD 380 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQR--DEWKHKAASRFVVVLNAETGERINK-------IE---LGH----------EIDSINVSQD 380 (426)
T ss_dssp CEEEEGGGTEEEEEEEEC--CTTCTTSCEEEEEEEETTTCCEEEE-------EE---EEE----------EECEEEECCS
T ss_pred eeEEcCCCCEEEEEeccc--ccccccCCCCEEEEEECCCCeEEEE-------EE---CCC----------CcCeEEEccC
Confidence 358999999876554321 012221 236899999988664211 11 100 1236789999
Q ss_pred CCEEEEEEEeCCeEEEEEEECCCCcEEEe
Q 003363 455 GCTMLLSSIWGSSQVIISVNVSSGELLRI 483 (826)
Q Consensus 455 g~~l~~~~~~~~~~~l~~vdl~tg~~~~l 483 (826)
|+.++|.+.+ ....|..+|+.++++..-
T Consensus 381 g~~~lyv~n~-~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 381 AEPLLYALSA-GTQTLHIYDAATGEELRS 408 (426)
T ss_dssp SSCEEEEEET-TTTEEEEEETTTCCEEEE
T ss_pred CCEEEEEEcC-CCCeEEEEECCCCCEEEE
Confidence 9944444443 345788899999987744
No 419
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.63 E-value=3.1e-08 Score=108.67 Aligned_cols=112 Identities=12% Similarity=0.033 Sum_probs=77.1
Q ss_pred CCCcEEEEEcCCCCCCCCccchH-HHHHH-HHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSK-SLAFL-SSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 667 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~-~~~~l-a~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 667 (826)
...|+||++||..... ...|.. .+..| +..+|.|+++|++|.+..... ... .......+++.+.++++.++..
T Consensus 67 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y~--~~~--~~~~~v~~~la~ll~~L~~~~g 141 (449)
T 1hpl_A 67 TGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKSGSRTAYS--QAS--QNVRIVGAEVAYLVGVLQSSFD 141 (449)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCHH--HHH--HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCcccCCccH--HHH--HHHHHHHHHHHHHHHHHHHhcC
Confidence 4568999999966442 234554 44444 567999999999984322100 000 0000113566777777765433
Q ss_pred CCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCcc
Q 003363 668 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (826)
Q Consensus 668 ~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 706 (826)
++.+++.|+|||+||.+|..++.++|++++++++..|..
T Consensus 142 ~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa~ 180 (449)
T 1hpl_A 142 YSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPAE 180 (449)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCccc
Confidence 567899999999999999999999999999999887754
No 420
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.62 E-value=2.7e-06 Score=90.28 Aligned_cols=187 Identities=15% Similarity=0.022 Sum_probs=104.0
Q ss_pred ceEEEEEccCCceEe-ccCCCCC----CccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccc
Q 003363 273 PSLFVININSGEVQA-VKGIPKS----LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKS 347 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~-l~~~~~~----~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 347 (826)
..|+++|++++++.. +. .... .....+++ +++. |+...+. ....|+++|+
T Consensus 105 ~~v~~iD~~t~~~~~~i~-~g~~~~~~~~p~~i~~--~~~~----lyv~~~~-------------~~~~v~viD~----- 159 (328)
T 3dsm_A 105 YRIFIINPKTYEITGYIE-CPDMDMESGSTEQMVQ--YGKY----VYVNCWS-------------YQNRILKIDT----- 159 (328)
T ss_dssp SEEEEEETTTTEEEEEEE-CTTCCTTTCBCCCEEE--ETTE----EEEEECT-------------TCCEEEEEET-----
T ss_pred CeEEEEECCCCeEEEEEE-cCCccccCCCcceEEE--ECCE----EEEEcCC-------------CCCEEEEEEC-----
Confidence 579999999988763 32 1110 13446666 5554 6554321 1237999998
Q ss_pred hhhhhhhhcCCCCCCcce-ecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeee
Q 003363 348 EASELELKESSSEDLPVV-NLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 426 (826)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~-~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 426 (826)
++++.. .+.. ........++|||+ |++..........+......|+++|..+++..
T Consensus 160 ------------~t~~~~~~i~~-g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~--------- 216 (328)
T 3dsm_A 160 ------------ETDKVVDELTI-GIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVE--------- 216 (328)
T ss_dssp ------------TTTEEEEEEEC-SSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE---------
T ss_pred ------------CCCeEEEEEEc-CCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEE---------
Confidence 555543 3332 23456788999998 54454332100000011367999998775431
Q ss_pred eeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEe--cCC-CCCeeeEEEeecCCEEE
Q 003363 427 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI--TPA-ESNFSWSLLTLDGDNII 503 (826)
Q Consensus 427 ~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~l--t~~-~~~~~~~~~s~dg~~l~ 503 (826)
..+..+.. .....++|+|||+.||++. . .++.+|++++++... ... ........++++++.++
T Consensus 217 -~~~~~~~g--------~~p~~la~~~d~~~lyv~~---~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~ly 282 (328)
T 3dsm_A 217 -KQFKFKLG--------DWPSEVQLNGTRDTLYWIN---N--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVY 282 (328)
T ss_dssp -EEEECCTT--------CCCEEEEECTTSCEEEEES---S--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEE
T ss_pred -EEEecCCC--------CCceeEEEecCCCEEEEEc---c--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEE
Confidence 11111100 1234678999999888753 2 789999998886421 111 12233346777677666
Q ss_pred EEE-eCCCCCCeEEEEeec
Q 003363 504 AVS-SSPVDVPQVKYGYFV 521 (826)
Q Consensus 504 ~~~-s~~~~p~~l~~~~~~ 521 (826)
+.. .+......|++++..
T Consensus 283 va~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 283 VADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEECTTSSSEEEEEEECTT
T ss_pred EEcccccccCCEEEEECCC
Confidence 664 222344567777754
No 421
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.60 E-value=3.6e-08 Score=108.17 Aligned_cols=111 Identities=12% Similarity=0.069 Sum_probs=75.0
Q ss_pred CCCcEEEEEcCCCCCCCCccchH-HHHHHHH-CCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSK-SLAFLSS-VGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGL 667 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~-~~~~la~-~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~ 667 (826)
...|+||++||..... ...|.. ....|.+ .+|.|+++|++|.+... ..... .......+++.+.++++.++..
T Consensus 68 ~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~--~~~~~~a~~l~~ll~~L~~~~g 142 (450)
T 1rp1_A 68 TDKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKGSQTS--YTQAA--NNVRVVGAQVAQMLSMLSANYS 142 (450)
T ss_dssp TTSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC--HHHHH--HHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccccCCc--chHHH--HHHHHHHHHHHHHHHHHHHhcC
Confidence 4579999999966442 224544 3445544 58999999999833211 00000 0001124566777777764433
Q ss_pred CCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCcc
Q 003363 668 ANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (826)
Q Consensus 668 ~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 706 (826)
++.+++.|+|||+||.+|..++.++|+ +.++++..|..
T Consensus 143 ~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa~ 180 (450)
T 1rp1_A 143 YSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPVE 180 (450)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCCC
T ss_pred CChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCccc
Confidence 567899999999999999999999999 99999887754
No 422
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.60 E-value=2.5e-06 Score=97.15 Aligned_cols=240 Identities=9% Similarity=-0.027 Sum_probs=138.9
Q ss_pred EEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCc
Q 003363 158 AVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 236 (826)
Q Consensus 158 ~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~ 236 (826)
.+.|+.|...++|+.+.+ ...+.+++ ..++....+.+.... .++.+||||++|+... .
T Consensus 158 ~~~~~~d~~~~~~V~~~~--~~~V~viD~~t~~v~~~i~~g~~p----------~~v~~SpDGr~lyv~~-~-------- 216 (567)
T 1qks_A 158 QQMNDWDLENLFSVTLRD--AGQIALIDGSTYEIKTVLDTGYAV----------HISRLSASGRYLFVIG-R-------- 216 (567)
T ss_dssp SCCSCCCGGGEEEEEETT--TTEEEEEETTTCCEEEEEECSSCE----------EEEEECTTSCEEEEEE-T--------
T ss_pred ccccccCCCceEEEEeCC--CCeEEEEECCCCeEEEEEeCCCCc----------cceEECCCCCEEEEEc-C--------
Confidence 456788877777887754 33677777 455555555554444 5789999999876542 1
Q ss_pred cCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEcc--CCceEeccCCCCCCccceEEEe----eCCCCCc
Q 003363 237 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ--SGEVQAVKGIPKSLSVGQVVWA----PLNEGLH 310 (826)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~--~g~~~~l~~~~~~~~~~~~~wS----PDg~~~~ 310 (826)
...|.++|+. ++++..- ++.......++|| |||++
T Consensus 217 -----------------------------------dg~V~viD~~~~t~~~v~~--i~~G~~P~~ia~s~~~~pDGk~-- 257 (567)
T 1qks_A 217 -----------------------------------DGKVNMIDLWMKEPTTVAE--IKIGSEARSIETSKMEGWEDKY-- 257 (567)
T ss_dssp -----------------------------------TSEEEEEETTSSSCCEEEE--EECCSEEEEEEECCSTTCTTTE--
T ss_pred -----------------------------------CCeEEEEECCCCCCcEeEE--EecCCCCceeEEccccCCCCCE--
Confidence 2469999995 5554322 2333456789999 79996
Q ss_pred cEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCccee-cCCC-----------CccccCce
Q 003363 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN-LTES-----------ISSAFFPR 378 (826)
Q Consensus 311 ~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-Lt~~-----------~~~~~~p~ 378 (826)
++... . .+..+.++|. .+.+... +.-. ........
T Consensus 258 --l~v~n-~-------------~~~~v~ViD~-----------------~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~ 304 (567)
T 1qks_A 258 --AIAGA-Y-------------WPPQYVIMDG-----------------ETLEPKKIQSTRGMTYDEQEYHPEPRVAAIL 304 (567)
T ss_dssp --EEEEE-E-------------ETTEEEEEET-----------------TTCCEEEEEECCEECTTTCCEESCCCEEEEE
T ss_pred --EEEEE-c-------------cCCeEEEEEC-----------------CCCcEEEEEeccccccccccccCCCceEEEE
Confidence 65544 2 1236778886 4444322 2111 00233456
Q ss_pred ecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEE
Q 003363 379 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTM 458 (826)
Q Consensus 379 ~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l 458 (826)
.|+++..+++.... ..+|+++|........ +..+ . .+.+ +....|+|||+++
T Consensus 305 ~s~~~~~~vv~~~~----------~g~v~~vd~~~~~~~~-------v~~i-~---~~~~-------~~d~~~~pdgr~~ 356 (567)
T 1qks_A 305 ASHYRPEFIVNVKE----------TGKILLVDYTDLNNLK-------TTEI-S---AERF-------LHDGGLDGSHRYF 356 (567)
T ss_dssp ECSSSSEEEEEETT----------TTEEEEEETTCSSEEE-------EEEE-E---CCSS-------EEEEEECTTSCEE
T ss_pred EcCCCCEEEEEecC----------CCeEEEEecCCCccce-------eeee-e---cccc-------ccCceECCCCCEE
Confidence 78888876655422 3679999976533111 1111 0 0111 1245699999988
Q ss_pred EEEEEeCCeEEEEEEECCCCcEEEecCC-CC-C--eeeE-EEeecCCEEEEEEeCCCCCCeEEEEeecc
Q 003363 459 LLSSIWGSSQVIISVNVSSGELLRITPA-ES-N--FSWS-LLTLDGDNIIAVSSSPVDVPQVKYGYFVD 522 (826)
Q Consensus 459 ~~~~~~~~~~~l~~vdl~tg~~~~lt~~-~~-~--~~~~-~~s~dg~~l~~~~s~~~~p~~l~~~~~~~ 522 (826)
+++... ...|..+|++++++.....- .. . .... .+.++++.++++..-. ...|.+++..+
T Consensus 357 ~va~~~--sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g--~~~Vsvid~~~ 421 (567)
T 1qks_A 357 ITAANA--RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG--DDSVALIGTDP 421 (567)
T ss_dssp EEEEGG--GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCT
T ss_pred EEEeCC--CCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCC--CCeEEEecCCC
Confidence 776533 34577799999987654432 11 0 0122 2466667665544322 23477777654
No 423
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.59 E-value=3.5e-06 Score=90.13 Aligned_cols=261 Identities=13% Similarity=0.032 Sum_probs=135.8
Q ss_pred EEEeCCCCCeEEEEecC------CCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCC
Q 003363 158 AVVPSPSGSKLLVVRNP------ENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (826)
Q Consensus 158 ~~~~SPdG~~la~~~~~------~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~ 230 (826)
.+.+||||+++++.... +.....+..++ ..++..+.+.+..... .+ ....-.++.+||||++|+.....+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~-~~-~g~~P~~ia~SpDGk~lyVan~~~- 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR-FS-VGPRVHIIGNCASSACLLFFLFGS- 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS-CC-BSCCTTSEEECTTSSCEEEEECSS-
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc-cc-cCCCcceEEEcCCCCEEEEEccCC-
Confidence 78999999999776421 11123456666 4556666665541100 00 000015899999999877653321
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEE--EEccCCceEeccCCCCCCccceEEEeeCCCC
Q 003363 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFV--ININSGEVQAVKGIPKSLSVGQVVWAPLNEG 308 (826)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v--~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~ 308 (826)
...+.+ +|+.+ +..+. .++. +...|+|+.
T Consensus 146 -----------------------------------------~~~v~V~~iD~~t--v~~i~-v~~~-----~~~~p~g~~ 176 (368)
T 1mda_H 146 -----------------------------------------SAAAGLSVPGASD--DQLTK-SASC-----FHIHPGAAA 176 (368)
T ss_dssp -----------------------------------------SCEEEEEETTTEE--EEEEE-CSSC-----CCCEEEETT
T ss_pred -----------------------------------------CCeEEEEEEchhh--ceEEE-CCCc-----eEEccCCCe
Confidence 245666 78776 45442 2221 234688887
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCccee-cCCCCccccCceecCCCCEEE
Q 003363 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVN-LTESISSAFFPRFSPDGKFLV 387 (826)
Q Consensus 309 ~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-Lt~~~~~~~~p~~SpDG~~l~ 387 (826)
.++... .+..+..+|+.... ...++... .+....-...|..++|++.++
T Consensus 177 ----~~~~~~--------------~dg~~~~vd~~~~~------------~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~ 226 (368)
T 1mda_H 177 ----THYLGS--------------CPASLAASDLAAAP------------AAAGIVGAQCTGAQNCSSQAAQANYPGMLV 226 (368)
T ss_dssp ----EEECCC--------------CTTSCEEEECCSSC------------CCCEECCCCSCTTSCBCSCCEEETTTTEEE
T ss_pred ----EEEEEc--------------CCCCEEEEECcccc------------ccCCeEEEEeeeeeeCCCCccccccCCEEE
Confidence 655431 12245667762000 00122211 000000112333488999998
Q ss_pred EEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCC-CCCcccccCCCCCCccccCCCEEEEEEEeC-
Q 003363 388 FLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG-DCFPGLYSSSILSNPWLSDGCTMLLSSIWG- 465 (826)
Q Consensus 388 f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~- 465 (826)
|.+. . .++.+|+.++... ++..+..... ....+....+...+.+++||+++|++....
T Consensus 227 ~vs~-~-----------~V~viD~~~~~~~--------v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~ 286 (368)
T 1mda_H 227 WAVA-S-----------SILQGDIPAAGAT--------MKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHS 286 (368)
T ss_dssp ECBS-S-----------CCEEEECCSSCCE--------EECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECS
T ss_pred EEcC-C-----------EEEEEECCCCcce--------EEEEEEeccccccccccccCcceeeEEcCCCCEEEEEecccc
Confidence 8885 3 3888998654321 1111110000 000000001222357999999998876523
Q ss_pred C-----eEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEe-CCCCCCeEEEEeeccc
Q 003363 466 S-----SQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSS-SPVDVPQVKYGYFVDK 523 (826)
Q Consensus 466 ~-----~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s-~~~~p~~l~~~~~~~~ 523 (826)
+ ...+..+|++++++..-.+.........+++||+.+++... .. ..|.++|+.+.
T Consensus 287 ~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~---~~VsVID~~t~ 347 (368)
T 1mda_H 287 RSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGT---EVLDIYDAASD 347 (368)
T ss_dssp SCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTT---TEEEEEESSSC
T ss_pred CcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCC---CeEEEEECCCC
Confidence 3 33455999999876543222222334578999998877766 33 44888887644
No 424
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=98.59 E-value=7.6e-08 Score=99.97 Aligned_cols=96 Identities=11% Similarity=0.022 Sum_probs=66.9
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (826)
+..|.||++||.+++ ...|...+..|. +.|+++|+++.. ....++++.+.+..+++.- ..
T Consensus 22 ~~~~~l~~~hg~~~~--~~~~~~~~~~L~---~~v~~~d~~~~~--------------~~~~~~~~a~~~~~~i~~~-~~ 81 (283)
T 3tjm_A 22 SSERPLFLVHPIEGS--TTVFHSLASRLS---IPTYGLQCTRAA--------------PLDSIHSLAAYYIDCIRQV-QP 81 (283)
T ss_dssp SSSCCEEEECCTTCC--SGGGHHHHHHCS---SCEEEECCCTTS--------------CCSCHHHHHHHHHHHHTTT-CC
T ss_pred CCCCeEEEECCCCCC--HHHHHHHHHhcC---ceEEEEecCCCC--------------CCCCHHHHHHHHHHHHHHh-CC
Confidence 345678999997765 557777777775 999999996521 1123555554444444332 12
Q ss_pred CCcEEEEEecchHHHHHHHHHhC---CCcee---EEEecCCc
Q 003363 670 PSKVTVVGGSHGGFLTTHLIGQA---PDKFV---AAAARNPL 705 (826)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~a~~~---p~~~~---a~v~~~p~ 705 (826)
.+++.|+||||||.+++.++.+. |+.+. +++++++.
T Consensus 82 ~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~~ 123 (283)
T 3tjm_A 82 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 123 (283)
T ss_dssp SSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESCC
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcCC
Confidence 36899999999999999998865 77887 88887764
No 425
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.59 E-value=2.2e-06 Score=89.88 Aligned_cols=251 Identities=6% Similarity=-0.092 Sum_probs=132.3
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (826)
-|.++|||+.+.|+... ...++.++. . ++...+.... ......+++|||+.++ ... +...
T Consensus 49 gp~~~~~g~~l~~~d~~--------~~~i~~~~~--~-g~~~~~~~~~-----~~~~gl~~d~dG~l~v-~~~---~~~~ 108 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLV--------GRRVLGWRE--D-GTVDVLLDAT-----AFTNGNAVDAQQRLVH-CEH---GRRA 108 (305)
T ss_dssp EEEEEGGGTEEEEEETT--------TTEEEEEET--T-SCEEEEEESC-----SCEEEEEECTTSCEEE-EET---TTTE
T ss_pred CCeEeCCCCEEEEEECC--------CCEEEEEeC--C-CCEEEEeCCC-----CccceeeECCCCCEEE-EEC---CCCE
Confidence 45678999988776322 224555543 2 2333333322 3467789999998443 322 1224
Q ss_pred EEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeec-CCCCCCCccCCCCCCCCCCccCCCCCCccee
Q 003363 181 QFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEE-PSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (826)
Q Consensus 181 ~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (826)
++.+..+++.+.+.....+.. ......+.++|||+ |+++... .... . +
T Consensus 109 v~~~~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~dG~-l~~td~~~g~~~--~-----------------------~ 157 (305)
T 3dr2_A 109 ITRSDADGQAHLLVGRYAGKR-----LNSPNDLIVARDGA-IWFTDPPFGLRK--P-----------------------S 157 (305)
T ss_dssp EEEECTTSCEEEEECEETTEE-----CSCCCCEEECTTSC-EEEECCSGGGSC--G-----------------------G
T ss_pred EEEECCCCCEEEEEeccCCCc-----cCCCCCEEECCCCC-EEEeCcCCCccc--c-----------------------c
Confidence 666654455554443211110 00125789999997 5553100 0000 0 0
Q ss_pred ecCCCcc-CCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceE
Q 003363 260 EEDWGET-YAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALY 338 (826)
Q Consensus 260 ~~d~g~~-~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~ 338 (826)
. +.. ........||++|.++|+++.+ . .......++|+|||+. |++....... .....|+
T Consensus 158 ~---~~~~~~~~~~~~v~~~d~~~g~~~~~--~-~~~~p~gl~~spdg~~----lyv~~~~~~~---------~~~~~i~ 218 (305)
T 3dr2_A 158 Q---GCPADPELAHHSVYRLPPDGSPLQRM--A-DLDHPNGLAFSPDEQT----LYVSQTPEQG---------HGSVEIT 218 (305)
T ss_dssp G---SCCCCCSSSCEEEEEECSSSCCCEEE--E-EESSEEEEEECTTSSE----EEEEECCC------------CCCEEE
T ss_pred c---ccccccccCCCeEEEEcCCCCcEEEE--e-cCCCCcceEEcCCCCE----EEEEecCCcC---------CCCCEEE
Confidence 0 000 0001236799999988988877 3 3234567899999997 7665421100 0124788
Q ss_pred EEEcccccchhhhhhhhcCCCCCC--cceec-CCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCC
Q 003363 339 AVRVSLYKSEASELELKESSSEDL--PVVNL-TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 339 ~~d~~~~~~~~~~~~~~~~~~~~~--~~~~L-t~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
++++.. .+ ..+.+ ....+......+++||+ +|++.. ..|+++|.++ +
T Consensus 219 ~~~~~~----------------~~l~~~~~~~~~~~~~pdgi~~d~~G~--lwv~~~-----------~gv~~~~~~g-~ 268 (305)
T 3dr2_A 219 AFAWRD----------------GALHDRRHFASVPDGLPDGFCVDRGGW--LWSSSG-----------TGVCVFDSDG-Q 268 (305)
T ss_dssp EEEEET----------------TEEEEEEEEECCSSSCCCSEEECTTSC--EEECCS-----------SEEEEECTTS-C
T ss_pred EEEecC----------------CCccCCeEEEECCCCCCCeEEECCCCC--EEEecC-----------CcEEEECCCC-C
Confidence 888731 11 01111 11233455678899998 445532 2388998643 2
Q ss_pred CCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEEC
Q 003363 416 NFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNV 475 (826)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl 475 (826)
.. ..+..+. .+..++|++|++.|++++. ..||++++
T Consensus 269 ~~----------~~~~~~~----------~~~~~~f~~d~~~L~it~~----~~l~~~~~ 304 (305)
T 3dr2_A 269 LL----------GHIPTPG----------TASNCTFDQAQQRLFITGG----PCLWMLPL 304 (305)
T ss_dssp EE----------EEEECSS----------CCCEEEECTTSCEEEEEET----TEEEEEEC
T ss_pred EE----------EEEECCC----------ceeEEEEeCCCCEEEEEcC----CeEEEEEC
Confidence 11 1111110 2346788899998888753 25777765
No 426
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.59 E-value=1.5e-05 Score=81.57 Aligned_cols=203 Identities=11% Similarity=0.122 Sum_probs=121.6
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecC-CCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~-~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
....++|+|++++|+++... ...++.+. +++....+.... ... .+++++|++..|++...
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~---~~~I~~~~~~g~~~~~~~~~~~~~p----------~~ia~d~~~~~lyv~d~----- 98 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDIS---EPSIGRASLHGGEPTTIIRQDLGSP----------EGIALDHLGRTIFWTDS----- 98 (267)
T ss_dssp EEEEEEEETTTTEEEEEETT---TTEEEEEESSSCCCEEEECTTCCCE----------EEEEEETTTTEEEEEET-----
T ss_pred cEEEEEEecCCCEEEEEECC---CCEEEEEecCCCCcEEEEECCCCCc----------cEEEEEecCCeEEEEEC-----
Confidence 45688999999998776542 33577777 333333333211 122 58899999888876532
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCcc
Q 003363 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~~ 311 (826)
....|+++++++...+.+ .... .....++++|++..
T Consensus 99 --------------------------------------~~~~I~~~~~~g~~~~~~--~~~~~~~P~~i~vd~~~g~--- 135 (267)
T 1npe_A 99 --------------------------------------QLDRIEVAKMDGTQRRVL--FDTGLVNPRGIVTDPVRGN--- 135 (267)
T ss_dssp --------------------------------------TTTEEEEEETTSCSCEEE--ECSSCSSEEEEEEETTTTE---
T ss_pred --------------------------------------CCCEEEEEEcCCCCEEEE--EECCCCCccEEEEeeCCCE---
Confidence 225789999887655544 2222 35678899998886
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecC-CCCccccCceecCCCCEEEEEe
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLS 390 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~l~f~s 390 (826)
|+++.... ....|+++++ ++...+.+. .........+++|||++|++..
T Consensus 136 -lyv~~~~~------------~~~~I~~~~~-----------------dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 136 -LYWTDWNR------------DNPKIETSHM-----------------DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp -EEEEECCS------------SSCEEEEEET-----------------TSCCCEEEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred -EEEEECCC------------CCcEEEEEec-----------------CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEE
Confidence 77664211 1237888887 433333332 2233456788999999887776
Q ss_pred ccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEE
Q 003363 391 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 470 (826)
Q Consensus 391 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l 470 (826)
.. ...|+++|+++..... +.. ....| . ....|+..||++. .+...|
T Consensus 186 ~~----------~~~I~~~~~~g~~~~~-------~~~------~~~~P-------~--gi~~d~~~lyva~--~~~~~v 231 (267)
T 1npe_A 186 AG----------THRAECLNPAQPGRRK-------VLE------GLQYP-------F--AVTSYGKNLYYTD--WKTNSV 231 (267)
T ss_dssp TT----------TTEEEEEETTEEEEEE-------EEE------CCCSE-------E--EEEEETTEEEEEE--TTTTEE
T ss_pred CC----------CCEEEEEecCCCceEE-------Eec------CCCCc-------e--EEEEeCCEEEEEE--CCCCeE
Confidence 44 2579999987532111 111 00011 1 2234667787753 233468
Q ss_pred EEEECCCCcEEE
Q 003363 471 ISVNVSSGELLR 482 (826)
Q Consensus 471 ~~vdl~tg~~~~ 482 (826)
+++|.++|+...
T Consensus 232 ~~~d~~~g~~~~ 243 (267)
T 1npe_A 232 IAMDLAISKEMD 243 (267)
T ss_dssp EEEETTTTEEEE
T ss_pred EEEeCCCCCceE
Confidence 899998877543
No 427
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.56 E-value=7e-06 Score=84.11 Aligned_cols=178 Identities=8% Similarity=-0.022 Sum_probs=106.8
Q ss_pred ceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhh
Q 003363 273 PSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (826)
..|++++++++..+.+ .... .....++++|+++. |+++.. ....|+++++
T Consensus 58 ~~I~~~~~~g~~~~~~--~~~~~~~p~~ia~d~~~~~----lyv~d~--------------~~~~I~~~~~--------- 108 (267)
T 1npe_A 58 PSIGRASLHGGEPTTI--IRQDLGSPEGIALDHLGRT----IFWTDS--------------QLDRIEVAKM--------- 108 (267)
T ss_dssp TEEEEEESSSCCCEEE--ECTTCCCEEEEEEETTTTE----EEEEET--------------TTTEEEEEET---------
T ss_pred CEEEEEecCCCCcEEE--EECCCCCccEEEEEecCCe----EEEEEC--------------CCCEEEEEEc---------
Confidence 6799999988776555 2222 35678899999886 766542 2236888887
Q ss_pred hhhhcCCCCCCcceecCC-CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeee
Q 003363 352 LELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (826)
Q Consensus 352 ~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 430 (826)
++...+.+.. ........+++|++.+|++..... ....|+++++++.....+. .
T Consensus 109 --------~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~--------~~~~I~~~~~dg~~~~~~~-------~-- 163 (267)
T 1npe_A 109 --------DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR--------DNPKIETSHMDGTNRRILA-------Q-- 163 (267)
T ss_dssp --------TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS--------SSCEEEEEETTSCCCEEEE-------C--
T ss_pred --------CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC--------CCcEEEEEecCCCCcEEEE-------E--
Confidence 4433333322 223456678999988887766431 1357889987653321110 0
Q ss_pred eccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCC
Q 003363 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 510 (826)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~ 510 (826)
. . + .....+++++|++.||++. .+...|+++|++++..+.+...... -..++.+++.+++.....
T Consensus 164 -~--~--~-----~~P~gia~d~~~~~lyv~d--~~~~~I~~~~~~g~~~~~~~~~~~~--P~gi~~d~~~lyva~~~~- 228 (267)
T 1npe_A 164 -D--N--L-----GLPNGLTFDAFSSQLCWVD--AGTHRAECLNPAQPGRRKVLEGLQY--PFAVTSYGKNLYYTDWKT- 228 (267)
T ss_dssp -T--T--C-----SCEEEEEEETTTTEEEEEE--TTTTEEEEEETTEEEEEEEEECCCS--EEEEEEETTEEEEEETTT-
T ss_pred -C--C--C-----CCCcEEEEcCCCCEEEEEE--CCCCEEEEEecCCCceEEEecCCCC--ceEEEEeCCEEEEEECCC-
Confidence 0 0 0 0123678999998888764 3345788999987665555432221 124566777777654332
Q ss_pred CCCeEEEEeec
Q 003363 511 DVPQVKYGYFV 521 (826)
Q Consensus 511 ~p~~l~~~~~~ 521 (826)
..|++++..
T Consensus 229 --~~v~~~d~~ 237 (267)
T 1npe_A 229 --NSVIAMDLA 237 (267)
T ss_dssp --TEEEEEETT
T ss_pred --CeEEEEeCC
Confidence 347776654
No 428
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.55 E-value=1.1e-05 Score=88.26 Aligned_cols=218 Identities=11% Similarity=0.022 Sum_probs=122.9
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
......+|+|+|+ |+++ +. ....+..++ .++....+....... . +.|+|||+.|+......
T Consensus 131 ~~P~~la~d~~g~-lyv~-d~--~~~~I~~id~~~g~~~~~~~~~~~~----------~-ia~~~~g~~l~~~d~~~--- 192 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAY-QR--DDPRVRLISVDDNKVTTVHPGFKGG----------K-PAVTKDKQRVYSIGWEG--- 192 (409)
T ss_dssp CCEEEEEECSTTE-EEEE-ET--TTTEEEEEETTTTEEEEEEETCCBC----------B-CEECTTSSEEEEEBSST---
T ss_pred CCceEEEEeCCCC-EEEE-ec--CCCcEEEEECCCCEEEEeeccCCCC----------c-eeEecCCCcEEEEecCC---
Confidence 4577889999998 5444 33 223566666 445555444332222 3 89999999776653221
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCce-Eecc-CCC-CCCccceEEEeeCCCCC
Q 003363 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV-QAVK-GIP-KSLSVGQVVWAPLNEGL 309 (826)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~-~~l~-~~~-~~~~~~~~~wSPDg~~~ 309 (826)
...|++++..++.. +.+. -.. ....+..++++|++..
T Consensus 193 ---------------------------------------~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~- 232 (409)
T 3hrp_A 193 ---------------------------------------THTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEW- 232 (409)
T ss_dssp ---------------------------------------TCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSE-
T ss_pred ---------------------------------------CceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCe-
Confidence 13799999887654 2220 012 2335667899996665
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceec----CCC-Cccc-c-CceecCC
Q 003363 310 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL----TES-ISSA-F-FPRFSPD 382 (826)
Q Consensus 310 ~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L----t~~-~~~~-~-~p~~SpD 382 (826)
|++.. ....|+++|. +++....+ ... .+.. . ..+|+|+
T Consensus 233 ---lyv~d---------------~~~~I~~~d~-----------------~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~ 277 (409)
T 3hrp_A 233 ---LYFVD---------------SNKNFGRFNV-----------------KTQEVTLIKQLELSGSLGTNPGPYLIYYFV 277 (409)
T ss_dssp ---EEEEC---------------TTCEEEEEET-----------------TTCCEEEEEECCCCSCCCCSSCCEEEEETT
T ss_pred ---EEEEE---------------CCCcEEEEEC-----------------CCCCEEEEecccccCCCCCCccccEEEeCC
Confidence 77732 1236999997 45544333 221 2222 3 7889998
Q ss_pred CCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccce--eeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEE
Q 003363 383 GKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI--VDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLL 460 (826)
Q Consensus 383 G~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~ 460 (826)
+..|++.... ...|++++.++. ...+.... .....- ......| .....+++++||+ ||+
T Consensus 278 ~g~lyv~d~~----------~~~I~~~~~~g~-~~~~~g~~~~~g~~dg--~~~~~~~-----~~P~gia~d~dG~-lyv 338 (409)
T 3hrp_A 278 DSNFYMSDQN----------LSSVYKITPDGE-CEWFCGSATQKTVQDG--LREEALF-----AQPNGMTVDEDGN-FYI 338 (409)
T ss_dssp TTEEEEEETT----------TTEEEEECTTCC-EEEEEECTTCCSCBCE--EGGGCBC-----SSEEEEEECTTCC-EEE
T ss_pred CCEEEEEeCC----------CCEEEEEecCCC-EEEEEeCCCCCCcCCC--cccccEe-----CCCeEEEEeCCCC-EEE
Confidence 7777665533 257999987653 11100000 000000 0000001 1234678999998 666
Q ss_pred EEEeC-CeEEEEEEECCCCcEEEecC
Q 003363 461 SSIWG-SSQVIISVNVSSGELLRITP 485 (826)
Q Consensus 461 ~~~~~-~~~~l~~vdl~tg~~~~lt~ 485 (826)
+ + . +...|+++++.+|++..+..
T Consensus 339 a-d-~~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 339 V-D-GFKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp E-E-TTTTCEEEEEETTTTEEEEEEE
T ss_pred E-e-CCCCCEEEEEECCCCEEEEEeC
Confidence 5 2 3 56678999987888877654
No 429
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.53 E-value=2e-06 Score=89.73 Aligned_cols=238 Identities=11% Similarity=0.025 Sum_probs=127.4
Q ss_pred ecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeE
Q 003363 102 NSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQ 181 (826)
Q Consensus 102 ~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~ 181 (826)
|.++|++..+.++... ...|+.++. .++....+... ..+...+++|||+ |++... ..+
T Consensus 18 p~w~~~~~~l~~~d~~--------~~~i~~~d~--~~~~~~~~~~~------~~~~~i~~~~dG~-l~v~~~-----~~l 75 (297)
T 3g4e_A 18 PVWEEVSNSLLFVDIP--------AKKVCRWDS--FTKQVQRVTMD------APVSSVALRQSGG-YVATIG-----TKF 75 (297)
T ss_dssp EEEETTTTEEEEEETT--------TTEEEEEET--TTCCEEEEECS------SCEEEEEEBTTSS-EEEEET-----TEE
T ss_pred CeEECCCCEEEEEECC--------CCEEEEEEC--CCCcEEEEeCC------CceEEEEECCCCC-EEEEEC-----CeE
Confidence 4457877777665322 235666554 22222222211 3477889999999 433322 257
Q ss_pred EEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceee
Q 003363 182 FELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWE 260 (826)
Q Consensus 182 ~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (826)
+.++ .+++.+.+........ ......+.++|||+ |++.........
T Consensus 76 ~~~d~~~g~~~~~~~~~~~~~-----~~~~~di~~d~dG~-l~~~~~~~~~~~--------------------------- 122 (297)
T 3g4e_A 76 CALNWKEQSAVVLATVDNDKK-----NNRFNDGKVDPAGR-YFAGTMAEETAP--------------------------- 122 (297)
T ss_dssp EEEETTTTEEEEEEECCTTCS-----SEEEEEEEECTTSC-EEEEEEECCSBT---------------------------
T ss_pred EEEECCCCcEEEEEecCCCCC-----CCCCCCEEECCCCC-EEEecCCccccc---------------------------
Confidence 7776 4555555554322110 01126789999998 555433211000
Q ss_pred cCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEE
Q 003363 261 EDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAV 340 (826)
Q Consensus 261 ~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~ 340 (826)
.........||.++.+ ++...+ ...-.....++|+|||+. |++... ....|+++
T Consensus 123 -----~~~~~~~~~l~~~d~~-g~~~~~--~~~~~~pngi~~spdg~~----lyv~~~--------------~~~~i~~~ 176 (297)
T 3g4e_A 123 -----AVLERHQGALYSLFPD-HHVKKY--FDQVDISNGLDWSLDHKI----FYYIDS--------------LSYSVDAF 176 (297)
T ss_dssp -----TBCCTTCEEEEEECTT-SCEEEE--EEEESBEEEEEECTTSCE----EEEEEG--------------GGTEEEEE
T ss_pred -----ccccCCCcEEEEEECC-CCEEEE--eeccccccceEEcCCCCE----EEEecC--------------CCCcEEEE
Confidence 0000133678988875 455444 222224567899999997 766542 12368888
Q ss_pred EcccccchhhhhhhhcCCCCCCcc---e---ecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCC
Q 003363 341 RVSLYKSEASELELKESSSEDLPV---V---NLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (826)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~---~---~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~ 414 (826)
+++. .++.. + .+....+......+++||+ | |++... ...|+++|.+++
T Consensus 177 ~~d~---------------~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-l-wva~~~---------~~~v~~~d~~tG 230 (297)
T 3g4e_A 177 DYDL---------------QTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-L-WVACYN---------GGRVIRLDPVTG 230 (297)
T ss_dssp EECT---------------TTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-E-EEEEET---------TTEEEEECTTTC
T ss_pred eccC---------------CCCcccCcEEEEECCCCCCCCCeeEECCCCC-E-EEEEcC---------CCEEEEEcCCCc
Confidence 7621 23322 1 1222223455678899996 3 344321 246999998765
Q ss_pred CCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccc-cCCCEEEEEEEeC
Q 003363 415 GNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWG 465 (826)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws-~Dg~~l~~~~~~~ 465 (826)
+... .+..+. ..+..++|+ ||+++||+++...
T Consensus 231 ~~~~----------~i~~p~---------~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 231 KRLQ----------TVKLPV---------DKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp CEEE----------EEECSS---------SBEEEEEEESGGGCEEEEEEBCT
T ss_pred eEEE----------EEECCC---------CCceEEEEeCCCCCEEEEEcCCc
Confidence 5321 111110 023366787 8999999887654
No 430
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.53 E-value=5e-06 Score=88.08 Aligned_cols=233 Identities=10% Similarity=0.059 Sum_probs=126.9
Q ss_pred EecCCCCcceEEEEEeechhhcccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCe
Q 003363 101 FNSGNGNGTQAMFSISQPNLLANKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPI 180 (826)
Q Consensus 101 ~~~~s~dg~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~ 180 (826)
-|.++||++.+.++... ...|+.++. .+++.+.++. + ..+...+|+|||+.++.. .. .
T Consensus 53 gp~~~~~~~~l~~~d~~--------~~~i~~~d~--~~~~~~~~~~-~-----~~v~~i~~~~dg~l~v~~-~~-----g 110 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNIL--------ERELHELHL--ASGRKTVHAL-P-----FMGSALAKISDSKQLIAS-DD-----G 110 (326)
T ss_dssp EEEEETTTTEEEEEEGG--------GTEEEEEET--TTTEEEEEEC-S-----SCEEEEEEEETTEEEEEE-TT-----E
T ss_pred CCeEeCCCCEEEEEECC--------CCEEEEEEC--CCCcEEEEEC-C-----CcceEEEEeCCCeEEEEE-CC-----C
Confidence 34567888877665322 235666654 3333333322 1 347778899999876653 21 3
Q ss_pred EEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCccee
Q 003363 181 QFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDW 259 (826)
Q Consensus 181 ~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (826)
++.++ .+++.+.+........ ...+..+.++|||+ |++.......
T Consensus 111 l~~~d~~~g~~~~~~~~~~~~~-----~~~~~~i~~d~~G~-l~v~~~~~~~---------------------------- 156 (326)
T 2ghs_A 111 LFLRDTATGVLTLHAELESDLP-----GNRSNDGRMHPSGA-LWIGTMGRKA---------------------------- 156 (326)
T ss_dssp EEEEETTTCCEEEEECSSTTCT-----TEEEEEEEECTTSC-EEEEEEETTC----------------------------
T ss_pred EEEEECCCCcEEEEeeCCCCCC-----CCCCCCEEECCCCC-EEEEeCCCcC----------------------------
Confidence 77776 4566555543321110 11236889999998 5444322100
Q ss_pred ecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEE
Q 003363 260 EEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 339 (826)
Q Consensus 260 ~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~ 339 (826)
......||+++ +++++.+ .........++|+|||+. |++... ....|++
T Consensus 157 ---------~~~~~~l~~~~--~g~~~~~--~~~~~~~~~i~~s~dg~~----lyv~~~--------------~~~~I~~ 205 (326)
T 2ghs_A 157 ---------ETGAGSIYHVA--KGKVTKL--FADISIPNSICFSPDGTT----GYFVDT--------------KVNRLMR 205 (326)
T ss_dssp ---------CTTCEEEEEEE--TTEEEEE--EEEESSEEEEEECTTSCE----EEEEET--------------TTCEEEE
T ss_pred ---------CCCceEEEEEe--CCcEEEe--eCCCcccCCeEEcCCCCE----EEEEEC--------------CCCEEEE
Confidence 00236799999 5777665 222223457899999997 777641 2237889
Q ss_pred EEcccccchhhhhhhhcCCCCCC-cc---e---ecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCC
Q 003363 340 VRVSLYKSEASELELKESSSEDL-PV---V---NLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 412 (826)
Q Consensus 340 ~d~~~~~~~~~~~~~~~~~~~~~-~~---~---~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~ 412 (826)
+|++. .++ .. + .+....+......+++||+. |++... ...|+++|..
T Consensus 206 ~d~~~---------------~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l--wva~~~---------~~~v~~~d~~ 259 (326)
T 2ghs_A 206 VPLDA---------------RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI--WNARWG---------EGAVDRYDTD 259 (326)
T ss_dssp EEBCT---------------TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE--EEEEET---------TTEEEEECTT
T ss_pred EEccc---------------ccCCcccCceEEEECCCCCCCCCeeEECCCCCE--EEEEeC---------CCEEEEECCC
Confidence 98720 123 21 1 12222333456778899963 333321 2468999863
Q ss_pred CCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccc-cCCCEEEEEEEeCC
Q 003363 413 TNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWL-SDGCTMLLSSIWGS 466 (826)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws-~Dg~~l~~~~~~~~ 466 (826)
++.. ..+..+. ..+..++|+ +|++.|++++...+
T Consensus 260 -g~~~----------~~i~~~~---------~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 260 -GNHI----------ARYEVPG---------KQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp -CCEE----------EEEECSC---------SBEEEEEEESTTSCEEEEEEBCTT
T ss_pred -CCEE----------EEEECCC---------CCcEEEEEecCCCCEEEEEecCCC
Confidence 2221 0111110 012356787 89888888776543
No 431
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.52 E-value=3.2e-06 Score=93.41 Aligned_cols=168 Identities=12% Similarity=0.119 Sum_probs=99.4
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CC--------ceeEEEecCCCccccccCCCcccceeecCC-CCeEE
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWS--QS--------QLEKEFHVPQTVHGSVYADGWFEGISWNSD-ETLIA 223 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~--------~~~~~~~~~~~~~g~v~~~~~~~~~~wSPD-g~~ia 223 (826)
.+...+|||||++||...... +....+.+|+ .+ +.........+..+.| ..++|+|+ ++.|+
T Consensus 94 ~v~~l~~spdg~~lav~~~sg-s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V------~~v~~~p~~~~~la 166 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSS-EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMV------IDMKWNPTVPSMVA 166 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEET-TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSE------EEEEECSSCTTEEE
T ss_pred cccEEEEcCCCCEEEEEEecc-CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCce------EEEEECCCCCCEEE
Confidence 488899999999998642111 1223455662 11 1111122222222333 79999998 66666
Q ss_pred EEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEe
Q 003363 224 YVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWA 303 (826)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wS 303 (826)
..+.+ ..|.+||+.++...... ......+..++|+
T Consensus 167 s~s~D--------------------------------------------g~v~iwD~~~~~~~~~~-~~~~~~v~~v~ws 201 (434)
T 2oit_A 167 VCLAD--------------------------------------------GSIAVLQVTETVKVCAT-LPSTVAVTSVCWS 201 (434)
T ss_dssp EEETT--------------------------------------------SCEEEEEESSSEEEEEE-ECGGGCEEEEEEC
T ss_pred EEECC--------------------------------------------CeEEEEEcCCCcceeec-cCCCCceeEEEEc
Confidence 65432 56999999887543221 2233467789999
Q ss_pred eCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCC-------CCccccC
Q 003363 304 PLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-------SISSAFF 376 (826)
Q Consensus 304 PDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~-------~~~~~~~ 376 (826)
|||+. |+..+ .+..|+.+|+ .+.....+.. +...+..
T Consensus 202 pdg~~----lasgs---------------~dg~v~iwd~-----------------~~~~~~~~~~~~~~~~~~~~~v~~ 245 (434)
T 2oit_A 202 PKGKQ----LAVGK---------------QNGTVVQYLP-----------------TLQEKKVIPCPPFYESDHPVRVLD 245 (434)
T ss_dssp TTSSC----EEEEE---------------TTSCEEEECT-----------------TCCEEEEECCCTTCCTTSCEEEEE
T ss_pred CCCCE----EEEEc---------------CCCcEEEEcc-----------------CCcccccccCCcccCCCCceeEEE
Confidence 99998 88766 2346888887 3122222221 1235778
Q ss_pred ceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCC
Q 003363 377 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTN 414 (826)
Q Consensus 377 p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~ 414 (826)
..|++++.+++..+..+ |.......++++++...
T Consensus 246 v~w~~~~~~l~~~~~~d----g~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 246 VLWIGTYVFAIVYAAAD----GTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEETTEEEEEEEETT----CCSSSCCEEEEEECCCT
T ss_pred EEEecCceEEEEEccCC----CccCCCCceEEEEeccC
Confidence 89999998876555443 11112345888888764
No 432
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.50 E-value=8.7e-06 Score=84.86 Aligned_cols=166 Identities=11% Similarity=0.049 Sum_probs=83.8
Q ss_pred cEEEEeCC---CCCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCC
Q 003363 156 ASAVVPSP---SGSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (826)
Q Consensus 156 ~~~~~~SP---dG~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~ 230 (826)
+...+||| ||+.||-.+.+ ..+.+| ..|+..+.+......... ....+|||||+.++..+.+..
T Consensus 181 v~~l~fs~~~g~~~~LaSgS~D-----~TIkIWDl~TGk~l~tL~g~~~~v~~------v~~vafSpdG~~lvs~s~~~~ 249 (356)
T 2w18_A 181 ETILTFAEVQGMQEALLGTTIM-----NNIVIWNLKTGQLLKKMHIDDSYQAS------VCHKAYSEMGLLFIVLSHPCA 249 (356)
T ss_dssp SCEEEEEEEETSTTEEEEEETT-----SEEEEEETTTCCEEEEEECCC---CC------CEEEEEEETTEEEEEEC----
T ss_pred eeeEEeeccCCCCceEEEecCC-----CcEEEEECCCCcEEEEEcCCCcceee------eEEEEECCCCCEEEEeccCCC
Confidence 44445555 44445444333 367788 345544444311110001 145689999998887654221
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEecc--CCCCCCccceEEEeeCCCC
Q 003363 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVK--GIPKSLSVGQVVWAPLNEG 308 (826)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~--~~~~~~~~~~~~wSPDg~~ 308 (826)
. | ...++.....|.+||+.+|+...+. ..+..........+.+|..
T Consensus 250 ~----w----------------------------~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~ 297 (356)
T 2w18_A 250 K----E----------------------------SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHC 297 (356)
T ss_dssp ----------------------------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTE
T ss_pred c----c----------------------------eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCE
Confidence 0 0 1122335678899999998764331 0011100001112222333
Q ss_pred CccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCcccc-CceecCCCCEE
Q 003363 309 LHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAF-FPRFSPDGKFL 386 (826)
Q Consensus 309 ~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~-~p~~SpDG~~l 386 (826)
++-.+ .+..|.++|+ .+++ ...|..+..... ..+|||||++|
T Consensus 298 ----lASgS---------------~DgTIkIWDl-----------------~tGk~l~tL~gH~~~vvs~vafSPDG~~L 341 (356)
T 2w18_A 298 ----AAAIL---------------TSGTIAIWDL-----------------LLGQCTALLPPVSDQHWSFVKWSGTDSHL 341 (356)
T ss_dssp ----EEEEE---------------TTSCEEEEET-----------------TTCSEEEEECCC--CCCCEEEECSSSSEE
T ss_pred ----EEEEc---------------CCCcEEEEEC-----------------CCCcEEEEecCCCCCeEEEEEECCCCCEE
Confidence 33322 3347999998 6665 456665654444 47999999998
Q ss_pred EEEeccCCCCCCCCcccceEEEEeC
Q 003363 387 VFLSAKSSVDSGAHSATDSLHRIDW 411 (826)
Q Consensus 387 ~f~s~~~~~~~g~~~~~~~l~~~d~ 411 (826)
+-.+.+ ..|++||.
T Consensus 342 aSGS~D-----------~TIklWd~ 355 (356)
T 2w18_A 342 LAGQKD-----------GNIFVYHY 355 (356)
T ss_dssp EEECTT-----------SCEEEEEE
T ss_pred EEEECC-----------CcEEEecC
Confidence 866654 34777764
No 433
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.50 E-value=1.4e-05 Score=84.77 Aligned_cols=219 Identities=9% Similarity=0.011 Sum_probs=121.9
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
.....++|||| +| |+.+.. ...+..++ ..++..+.+.+.... +. .....++.+ ++++|+.. ..
T Consensus 85 ~p~~i~~~~~g-~l-yv~~~~--~~~v~~iD~~t~~~~~~i~~g~~~-~~---~~~p~~i~~--~~~~lyv~-~~----- 148 (328)
T 3dsm_A 85 SPRYIHFLSDE-KA-YVTQIW--DYRIFIINPKTYEITGYIECPDMD-ME---SGSTEQMVQ--YGKYVYVN-CW----- 148 (328)
T ss_dssp SEEEEEEEETT-EE-EEEEBS--CSEEEEEETTTTEEEEEEECTTCC-TT---TCBCCCEEE--ETTEEEEE-EC-----
T ss_pred CCcEEEEeCCC-eE-EEEECC--CCeEEEEECCCCeEEEEEEcCCcc-cc---CCCcceEEE--ECCEEEEE-cC-----
Confidence 46678899998 55 554421 23577776 455555555543300 00 000146666 56665443 21
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEE
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (826)
| ....|.++|++++++... ++.......+.++|||+ +
T Consensus 149 ------------------------------~------~~~~v~viD~~t~~~~~~--i~~g~~p~~i~~~~dG~-----l 185 (328)
T 3dsm_A 149 ------------------------------S------YQNRILKIDTETDKVVDE--LTIGIQPTSLVMDKYNK-----M 185 (328)
T ss_dssp ------------------------------T------TCCEEEEEETTTTEEEEE--EECSSCBCCCEECTTSE-----E
T ss_pred ------------------------------C------CCCEEEEEECCCCeEEEE--EEcCCCccceEEcCCCC-----E
Confidence 0 125799999999886544 23333456789999998 6
Q ss_pred EEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcce-ecCCC-CccccCceecCCCCEEEEEec
Q 003363 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVV-NLTES-ISSAFFPRFSPDGKFLVFLSA 391 (826)
Q Consensus 314 vf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~Lt~~-~~~~~~p~~SpDG~~l~f~s~ 391 (826)
++++...... ..+ ......|+++|. ++++.. .+.-. .......+|+|||++|++...
T Consensus 186 ~v~~~~~~~~---~~~-~~~~~~v~~id~-----------------~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 186 WTITDGGYEG---SPY-GYEAPSLYRIDA-----------------ETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp EEEBCCBCTT---CSS-CBCCCEEEEEET-----------------TTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS
T ss_pred EEEECCCccC---Ccc-ccCCceEEEEEC-----------------CCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc
Confidence 6665322100 000 001247999997 555543 33222 224677899999998765431
Q ss_pred cCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEe--CCeEE
Q 003363 392 KSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--GSSQV 469 (826)
Q Consensus 392 ~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~--~~~~~ 469 (826)
.|+++|..+++..... +.+ . .. .....++++|++..||++... .....
T Consensus 245 -------------~v~~~d~~t~~~~~~~-----~~~---~--~~-------~~p~gi~vdp~~g~lyva~~~~y~~~~~ 294 (328)
T 3dsm_A 245 -------------DIWRMPVEADRVPVRP-----FLE---F--RD-------TKYYGLTVNPNNGEVYVADAIDYQQQGI 294 (328)
T ss_dssp -------------SEEEEETTCSSCCSSC-----SBC---C--CS-------SCEEEEEECTTTCCEEEEECTTSSSEEE
T ss_pred -------------EEEEEECCCCceeeee-----eec---C--CC-------CceEEEEEcCCCCeEEEEcccccccCCE
Confidence 4899998876642110 000 0 00 122356789877778776411 34567
Q ss_pred EEEEECCCCcEEEe
Q 003363 470 IISVNVSSGELLRI 483 (826)
Q Consensus 470 l~~vdl~tg~~~~l 483 (826)
|+++|.++..+..+
T Consensus 295 V~v~d~~g~~~~~i 308 (328)
T 3dsm_A 295 VYRYSPQGKLIDEF 308 (328)
T ss_dssp EEEECTTCCEEEEE
T ss_pred EEEECCCCCEEEEE
Confidence 88889873334444
No 434
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.44 E-value=1.6e-05 Score=88.05 Aligned_cols=298 Identities=10% Similarity=-0.010 Sum_probs=153.7
Q ss_pred ccceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCc
Q 003363 123 NKRKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTV 200 (826)
Q Consensus 123 ~~~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~ 200 (826)
+.....+.++++.+. .....+.... ..+....|+ ++.|+.....+ .+.+|+ .++...... +.
T Consensus 135 g~~dg~i~vwd~~~~-~~~~~~~~h~-----~~v~~~~~~--~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~---~h 198 (445)
T 2ovr_B 135 GSDDNTLKVWSAVTG-KCLRTLVGHT-----GGVWSSQMR--DNIIISGSTDR-----TLKVWNAETGECIHTLY---GH 198 (445)
T ss_dssp EETTSCEEEEETTTC-CEEEECCCCS-----SCEEEEEEE--TTEEEEEETTS-----CEEEEETTTTEEEEEEC---CC
T ss_pred EECCCcEEEEECCCC-cEEEEEcCCC-----CCEEEEEec--CCEEEEEeCCC-----eEEEEECCcCcEEEEEC---CC
Confidence 334556777765322 2222232222 457777776 56777665433 456663 333333322 22
Q ss_pred cccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEc
Q 003363 201 HGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVINI 280 (826)
Q Consensus 201 ~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~ 280 (826)
.+.| ..+.|+ ++.|+..+.+.... .|+............+........| +....+++..+..|.+||+
T Consensus 199 ~~~v------~~~~~~--~~~l~s~s~dg~i~--~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~ 266 (445)
T 2ovr_B 199 TSTV------RCMHLH--EKRVVSGSRDATLR--VWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDP 266 (445)
T ss_dssp SSCE------EEEEEE--TTEEEEEETTSEEE--EEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEG
T ss_pred CCcE------EEEEec--CCEEEEEeCCCEEE--EEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEEC
Confidence 2222 566664 56777776665432 2222111111111222222333334 3233445556788999999
Q ss_pred cCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCC
Q 003363 281 NSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSE 360 (826)
Q Consensus 281 ~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 360 (826)
.+++..... ......+..+.| |++. |+..+ .+..|..+|+ .
T Consensus 267 ~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~~~~---------------~d~~i~i~d~-----------------~ 307 (445)
T 2ovr_B 267 ETETCLHTL-QGHTNRVYSLQF--DGIH----VVSGS---------------LDTSIRVWDV-----------------E 307 (445)
T ss_dssp GGTEEEEEE-CCCSSCEEEEEE--CSSE----EEEEE---------------TTSCEEEEET-----------------T
T ss_pred CCCcEeEEe-cCCCCceEEEEE--CCCE----EEEEe---------------CCCeEEEEEC-----------------C
Confidence 888755431 223334556666 7876 66655 3347889998 4
Q ss_pred CCc-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCc
Q 003363 361 DLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFP 439 (826)
Q Consensus 361 ~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 439 (826)
+++ ...+..+...+. .++++|+.|+..+.+ ..|.+||+.+++..... .... .
T Consensus 308 ~~~~~~~~~~~~~~v~--~~~~~~~~l~~~~~d-----------g~i~vwd~~~~~~~~~~----------~~~~--~-- 360 (445)
T 2ovr_B 308 TGNCIHTLTGHQSLTS--GMELKDNILVSGNAD-----------STVKIWDIKTGQCLQTL----------QGPN--K-- 360 (445)
T ss_dssp TCCEEEEECCCCSCEE--EEEEETTEEEEEETT-----------SCEEEEETTTCCEEEEE----------CSTT--S--
T ss_pred CCCEEEEEcCCcccEE--EEEEeCCEEEEEeCC-----------CeEEEEECCCCcEEEEE----------ccCC--C--
Confidence 444 344544444343 345577777655543 45899998775432110 0000 0
Q ss_pred ccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec------CCCCCeeeEEEeecCCEEEEEEeCCCCCC
Q 003363 440 GLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT------PAESNFSWSLLTLDGDNIIAVSSSPVDVP 513 (826)
Q Consensus 440 g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt------~~~~~~~~~~~s~dg~~l~~~~s~~~~p~ 513 (826)
....+..+.| +++.| ++...++ .|..+|+.+++..+.. ...+.+....|++++..++....+...+.
T Consensus 361 --~~~~v~~~~~--~~~~l-~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~ 433 (445)
T 2ovr_B 361 --HQSAVTCLQF--NKNFV-ITSSDDG--TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEET 433 (445)
T ss_dssp --CSSCEEEEEE--CSSEE-EEEETTS--EEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCC
T ss_pred --CCCCEEEEEE--CCCEE-EEEeCCC--eEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCcc
Confidence 0112234455 45544 4444444 4555688888755433 22223444567777665555555555577
Q ss_pred eEEEEeec
Q 003363 514 QVKYGYFV 521 (826)
Q Consensus 514 ~l~~~~~~ 521 (826)
.+++.++.
T Consensus 434 ~l~v~df~ 441 (445)
T 2ovr_B 434 KLLVLDFD 441 (445)
T ss_dssp EEEEEECC
T ss_pred EEEEEECC
Confidence 88888865
No 435
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.44 E-value=3.9e-07 Score=82.27 Aligned_cols=82 Identities=17% Similarity=0.201 Sum_probs=55.2
Q ss_pred CcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCCCC
Q 003363 592 DPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLANPS 671 (826)
Q Consensus 592 ~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ 671 (826)
.|.||++| +. ...|... |+ ++|.|+++|+||.+. +.. +.. . .+++.+.+..+++. ++.+
T Consensus 22 ~~~vv~~H-~~----~~~~~~~---l~-~~~~v~~~d~~G~G~---s~~---~~~--~--~~~~~~~~~~~~~~--~~~~ 80 (131)
T 2dst_A 22 GPPVLLVA-EE----ASRWPEA---LP-EGYAFYLLDLPGYGR---TEG---PRM--A--PEELAHFVAGFAVM--MNLG 80 (131)
T ss_dssp SSEEEEES-SS----GGGCCSC---CC-TTSEEEEECCTTSTT---CCC---CCC--C--HHHHHHHHHHHHHH--TTCC
T ss_pred CCeEEEEc-CC----HHHHHHH---Hh-CCcEEEEECCCCCCC---CCC---CCC--C--HHHHHHHHHHHHHH--cCCC
Confidence 47899999 22 1223222 44 459999999999543 321 111 1 55555555555554 3457
Q ss_pred cEEEEEecchHHHHHHHHHhCCC
Q 003363 672 KVTVVGGSHGGFLTTHLIGQAPD 694 (826)
Q Consensus 672 rv~l~G~S~GG~~a~~~a~~~p~ 694 (826)
++.++|||+||.+++.++.++|.
T Consensus 81 ~~~lvG~S~Gg~~a~~~a~~~p~ 103 (131)
T 2dst_A 81 APWVLLRGLGLALGPHLEALGLR 103 (131)
T ss_dssp SCEEEECGGGGGGHHHHHHTTCC
T ss_pred ccEEEEEChHHHHHHHHHhcCCc
Confidence 89999999999999999999885
No 436
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.41 E-value=1.1e-05 Score=83.97 Aligned_cols=226 Identities=9% Similarity=0.021 Sum_probs=109.2
Q ss_pred ecccEEEEeCCC----CCeEEEEecCCCCCCeEEEEe--cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEe
Q 003363 153 MTGASAVVPSPS----GSKLLVVRNPENESPIQFELW--SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVA 226 (826)
Q Consensus 153 ~~~~~~~~~SPd----G~~la~~~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~ 226 (826)
...+...++||| |++++.... ...+| .+++ .+.....+..+ .+.-..+||||+.++-..
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~-------~~~v~~l~~g~--lv~ss~~g~d~------~V~~~~~s~dG~~~~s~~ 175 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGN-------IKAVLGLTKRR--LVSSSGTLSDQ------QVEVMTFAEDGGGKENQF 175 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEE-------EEEEEEETTTE--EEEEESSSTTC------EEEEEEECTTSCEEEEEE
T ss_pred ccceEEEEECCCccccccEEEeCCC-------eEEEEecCCCc--EEEecccCCCC------cEEEEEECCCCceeeeec
Confidence 345778888999 888876432 12334 2222 22221122222 237788999998776433
Q ss_pred ecCCCCCCCccCCCCCCCCCCccCCCCCCcceeec--CCCccC-CCccCceEEEEEccCCce-EeccCCC-CCCccceEE
Q 003363 227 EEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEE--DWGETY-AGKRQPSLFVININSGEV-QAVKGIP-KSLSVGQVV 301 (826)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~g~~~-~~~~~~~l~v~d~~~g~~-~~l~~~~-~~~~~~~~~ 301 (826)
-... ......|++ +-++.+ ++..+..|.+||+++|+. +.+.+.. ....+..++
T Consensus 176 ~~~~----------------------~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~va 233 (356)
T 2w18_A 176 LMPP----------------------EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKA 233 (356)
T ss_dssp ECCC----------------------SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEE
T ss_pred cCCC----------------------ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEE
Confidence 2211 111222333 112333 334578999999999985 4442111 112445668
Q ss_pred EeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecC------CCCcccc
Q 003363 302 WAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT------ESISSAF 375 (826)
Q Consensus 302 wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt------~~~~~~~ 375 (826)
|||||+. ++..+.+... +.+. .-..+..|..+|. .++...... .+.....
T Consensus 234 fSpdG~~----lvs~s~~~~~--w~la-SGs~D~tIklWd~-----------------~tgk~l~v~~~~~p~Gh~~~~l 289 (356)
T 2w18_A 234 YSEMGLL----FIVLSHPCAK--ESES-LRSPVFQLIVINP-----------------KTTLSVGVMLYCLPPGQAGRFL 289 (356)
T ss_dssp EEETTEE----EEEEC---------------CCEEEEEEET-----------------TTTEEEEEEEECCCTTCCCCEE
T ss_pred ECCCCCE----EEEeccCCCc--ceee-ccCCCcEEEEEEC-----------------CCCEEEEEEEeeccCCCcceeE
Confidence 9999997 7665421110 0000 0123345667776 455432211 1111111
Q ss_pred CceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCC-CCccccC
Q 003363 376 FPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSIL-SNPWLSD 454 (826)
Q Consensus 376 ~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~-~~~ws~D 454 (826)
.. +.+|..++-.+.+ ..|.+||+.+++......+.. ..+. .++|+||
T Consensus 290 sg--~~sg~~lASgS~D-----------gTIkIWDl~tGk~l~tL~gH~-------------------~~vvs~vafSPD 337 (356)
T 2w18_A 290 EG--DVKDHCAAAILTS-----------GTIAIWDLLLGQCTALLPPVS-------------------DQHWSFVKWSGT 337 (356)
T ss_dssp EE--EEETTEEEEEETT-----------SCEEEEETTTCSEEEEECCC---------------------CCCCEEEECSS
T ss_pred cc--ccCCCEEEEEcCC-----------CcEEEEECCCCcEEEEecCCC-------------------CCeEEEEEECCC
Confidence 11 2225555544433 359999999876532111110 0122 3689999
Q ss_pred CCEEEEEEEeCCeEEEEE
Q 003363 455 GCTMLLSSIWGSSQVIIS 472 (826)
Q Consensus 455 g~~l~~~~~~~~~~~l~~ 472 (826)
|++| ++...++..+||.
T Consensus 338 G~~L-aSGS~D~TIklWd 354 (356)
T 2w18_A 338 DSHL-LAGQKDGNIFVYH 354 (356)
T ss_dssp SSEE-EEECTTSCEEEEE
T ss_pred CCEE-EEEECCCcEEEec
Confidence 9966 4555566666664
No 437
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.40 E-value=5.2e-05 Score=81.58 Aligned_cols=204 Identities=13% Similarity=0.024 Sum_probs=96.3
Q ss_pred cCceEEEEEccCCceEeccCCCCC--CccceEEEeeCCCCCccEEEEEeecCc-ceeeeeeeec---cCCCceEEEEccc
Q 003363 271 RQPSLFVININSGEVQAVKGIPKS--LSVGQVVWAPLNEGLHQYLVFVGWSSE-TRKLGIKYCY---NRPCALYAVRVSL 344 (826)
Q Consensus 271 ~~~~l~v~d~~~g~~~~l~~~~~~--~~~~~~~wSPDg~~~~~~lvf~~~~~~-~~~~g~~~~~---~~~~~l~~~d~~~ 344 (826)
....|.++|.+++++..--..... ...-++.|+||++. ++.+.|... .++.|+.... .....|+.+|+
T Consensus 162 ~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~----mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~-- 235 (462)
T 2ece_A 162 GPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEV----LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL-- 235 (462)
T ss_dssp SCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTE----EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET--
T ss_pred CCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCE----EEEccCcCccccccccchhhhhhccCCEEEEEEC--
Confidence 457899999999887654111111 12235889999995 544433211 0111111100 23458999998
Q ss_pred ccchhhhhhhhcCCCCCCcc-eecCCC-Cc-cccCc--eecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCc
Q 003363 345 YKSEASELELKESSSEDLPV-VNLTES-IS-SAFFP--RFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS 419 (826)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~-~~Lt~~-~~-~~~~p--~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~ 419 (826)
.+++. ..+.-+ .+ ..... .|+|||++++....-... .-..+|+++..+.+...
T Consensus 236 ---------------~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~-----~Lss~V~v~~~d~g~~~-- 293 (462)
T 2ece_A 236 ---------------RKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLK-----DLSSSIWLWFYEDGKWN-- 293 (462)
T ss_dssp ---------------TTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETT-----TCCEEEEEEEEETTEEE--
T ss_pred ---------------CCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeecc-----CCCceEEEEEecCCcee--
Confidence 44432 233322 11 12223 459999976544430000 01246776665442211
Q ss_pred ccceeeeeeeeeccCCCCCccc---c---cCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEE---EecCC----
Q 003363 420 LEKIVDVIPVVQCAEGDCFPGL---Y---SSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELL---RITPA---- 486 (826)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~f~g~---~---~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~---~lt~~---- 486 (826)
...++.+-..+..+..+.+ + ......+.+|+||+.||++....+...+|.++ +.++.+ ++..+
T Consensus 294 ---~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~-d~~~~~lv~~I~tGG~~~ 369 (462)
T 2ece_A 294 ---AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS-NPFKPVLTGKVKLGGIFH 369 (462)
T ss_dssp ---EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS-STTSCEEEEEEECBTTTT
T ss_pred ---EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec-CCCCcEEEEEEEeCCeec
Confidence 1111111110000111100 0 01345677999999888765444444444442 233222 22222
Q ss_pred -------C---CCeeeEEEeecCCEEEEEE
Q 003363 487 -------E---SNFSWSLLTLDGDNIIAVS 506 (826)
Q Consensus 487 -------~---~~~~~~~~s~dg~~l~~~~ 506 (826)
. +.-....+++||+++++..
T Consensus 370 ~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 370 RADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 0 0123357888998877665
No 438
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.37 E-value=3.1e-05 Score=83.31 Aligned_cols=87 Identities=18% Similarity=0.101 Sum_probs=50.5
Q ss_pred cccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCC---------CCCccccc
Q 003363 373 SAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG---------DCFPGLYS 443 (826)
Q Consensus 373 ~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---------~~f~g~~~ 443 (826)
......+|||||+| |++++. .+.|.++|+...+... ++..+.+.+. ....
T Consensus 322 ~pa~I~lS~DGrfL-YVSnrg---------~d~VavfdV~d~~~~~-------lv~~I~tGG~~~~~~~~~G~~~~---- 380 (462)
T 2ece_A 322 LVTDIDISLDDKFL-YLSLWG---------IGEVRQYDISNPFKPV-------LTGKVKLGGIFHRADHPAGHKLT---- 380 (462)
T ss_dssp CCCCEEECTTSCEE-EEEETT---------TTEEEEEECSSTTSCE-------EEEEEECBTTTTCBCCTTSCCCC----
T ss_pred ceeEEEECCCCCEE-EEEeCC---------CCEEEEEEecCCCCcE-------EEEEEEeCCeeccccccccccCC----
Confidence 46778899999976 677663 3678888875322211 1122222110 0111
Q ss_pred CCCCCCccccCCCEEEEEEE-----------eCCeEEEEEE--ECCCCcEE
Q 003363 444 SSILSNPWLSDGCTMLLSSI-----------WGSSQVIISV--NVSSGELL 481 (826)
Q Consensus 444 ~~~~~~~ws~Dg~~l~~~~~-----------~~~~~~l~~v--dl~tg~~~ 481 (826)
.....+.+||||++||++.. .+....++.+ |.++| ++
T Consensus 381 ggPr~~~lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~~~G-L~ 430 (462)
T 2ece_A 381 GAPQMLEISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANPSGG-LE 430 (462)
T ss_dssp SCCCCEEECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECTTSC-EE
T ss_pred CCCCEEEEcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecCCCC-ce
Confidence 13457789999999988862 2334566644 66667 44
No 439
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.37 E-value=3.8e-05 Score=80.26 Aligned_cols=196 Identities=11% Similarity=0.029 Sum_probs=103.3
Q ss_pred eEEEEEccCCceEec-cCCCC---CCccceEEEeeCCCCCccEEEEEeecCcceeeeee-eeccCCCceEEEEcccccch
Q 003363 274 SLFVININSGEVQAV-KGIPK---SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIK-YCYNRPCALYAVRVSLYKSE 348 (826)
Q Consensus 274 ~l~v~d~~~g~~~~l-~~~~~---~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~-~~~~~~~~l~~~d~~~~~~~ 348 (826)
.|+++|.+ |+.+.+ ..... ...+..++++|||+ |+++............ ........||+++.
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-----l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~------ 160 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-----LWITAPAGEVAPADYTRSMQEKFGSIYCFTT------ 160 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-----EEEEECBCBCTTSCCCBTTSSSCEEEEEECT------
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-----EEEEecCcccccccccccccCCCCeEEEECC------
Confidence 68999988 777655 31111 12466889999996 7666532100000000 00011236888886
Q ss_pred hhhhhhhcCCCCCCcceecCCCCccccCceec----CCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCccccee
Q 003363 349 ASELELKESSSEDLPVVNLTESISSAFFPRFS----PDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIV 424 (826)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~S----pDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 424 (826)
+ ++...+...........|+ |||+.|++.... ...|+++|+...+.. . ..
T Consensus 161 -----------~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~----------~~~i~~~~~~~~g~~--~--~~ 214 (314)
T 1pjx_A 161 -----------D-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP----------TKKLWSYDIKGPAKI--E--NK 214 (314)
T ss_dssp -----------T-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT----------TTEEEEEEEEETTEE--E--EE
T ss_pred -----------C-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECC----------CCeEEEEECCCCCcc--c--cc
Confidence 4 4444443333334567899 999877665533 256888887521110 0 00
Q ss_pred eeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcE-EEecCCCCCeeeEEEeecCCEEE
Q 003363 425 DVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGEL-LRITPAESNFSWSLLTLDGDNII 503 (826)
Q Consensus 425 ~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~-~~lt~~~~~~~~~~~s~dg~~l~ 503 (826)
.+. ...+... + .....+++++||+ |+++... ...|+++|.++|+. ..+...........++++++.|+
T Consensus 215 ~~~--~~~~~~~-~-----~~p~~i~~d~~G~-l~v~~~~--~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 215 KVW--GHIPGTH-E-----GGADGMDFDEDNN-LLVANWG--SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp EEE--EECCCCS-S-----CEEEEEEEBTTCC-EEEEEET--TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEE
T ss_pred eEE--EECCCCC-C-----CCCCceEECCCCC-EEEEEcC--CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEE
Confidence 000 0011000 0 0123567889996 6555432 33688889886654 33433323344456778888776
Q ss_pred EEEeCCCCCCeEEEEeec
Q 003363 504 AVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 504 ~~~s~~~~p~~l~~~~~~ 521 (826)
+..... ..|+.+++.
T Consensus 284 v~~~~~---~~l~~~~~~ 298 (314)
T 1pjx_A 284 VTEHEN---NAVWKFEWQ 298 (314)
T ss_dssp EEETTT---TEEEEEECS
T ss_pred EEeCCC---CeEEEEeCC
Confidence 665432 457777754
No 440
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.33 E-value=2.1e-06 Score=94.87 Aligned_cols=93 Identities=13% Similarity=0.088 Sum_probs=59.2
Q ss_pred CceEEEEEccCC-----c-------eEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEE
Q 003363 272 QPSLFVININSG-----E-------VQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYA 339 (826)
Q Consensus 272 ~~~l~v~d~~~g-----~-------~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~ 339 (826)
...|.+||+.++ + .+.+ ......+..++|+|++.. ++.++. .+..|++
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~v~~~p~~~~----~las~s--------------~Dg~v~i 176 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLL--KDAGGMVIDMKWNPTVPS----MVAVCL--------------ADGSIAV 176 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECC--CSGGGSEEEEEECSSCTT----EEEEEE--------------TTSCEEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeecc--CCCCCceEEEEECCCCCC----EEEEEE--------------CCCeEEE
Confidence 367899998764 1 1111 112346788999999544 544441 2347888
Q ss_pred EEcccccchhhhhhhhcCCCCCCcc-eecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCC
Q 003363 340 VRVSLYKSEASELELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 412 (826)
Q Consensus 340 ~d~~~~~~~~~~~~~~~~~~~~~~~-~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~ 412 (826)
+|+ .++.. .....+...+...+|||||++|+..+.+ ..|.+||..
T Consensus 177 wD~-----------------~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d-----------g~v~iwd~~ 222 (434)
T 2oit_A 177 LQV-----------------TETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN-----------GTVVQYLPT 222 (434)
T ss_dssp EEE-----------------SSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT-----------SCEEEECTT
T ss_pred EEc-----------------CCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC-----------CcEEEEccC
Confidence 888 44422 2223334567889999999999877644 358888876
No 441
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.31 E-value=9.4e-05 Score=75.36 Aligned_cols=174 Identities=5% Similarity=-0.033 Sum_probs=94.3
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhh
Q 003363 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (826)
..|+++|.+++....+. ......+..++++|||+ |++... ....|++++.
T Consensus 87 ~~i~~~d~~~~~~~~~~-~~~~~~p~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 136 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLP-FDGLNYPEGLAVDTQGA-----VYVADR--------------GNNRVVKLAA---------- 136 (270)
T ss_dssp TEEEEECTTCSCCEECC-CCSCSSEEEEEECTTCC-----EEEEEG--------------GGTEEEEECT----------
T ss_pred CEEEEEeCCCceEeeee-cCCcCCCcceEECCCCC-----EEEEEC--------------CCCEEEEEEC----------
Confidence 46889998877666552 12223567889999886 665541 1236888875
Q ss_pred hhhcCCCCCCcceecC-CCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeee
Q 003363 353 ELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 431 (826)
Q Consensus 353 ~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 431 (826)
.+....... ..........++|||+ |++.... ...|+++|..++........
T Consensus 137 -------~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----------~~~i~~~~~~~~~~~~~~~~--------- 189 (270)
T 1rwi_B 137 -------GSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTD----------NNRVVKLEAESNNQVVLPFT--------- 189 (270)
T ss_dssp -------TCCSCEECCCCSCCSCCCEEECTTCC-EEEEEGG----------GTEEEEECTTTCCEEECCCS---------
T ss_pred -------CCceeEeeccccCCCceeEEEeCCCC-EEEEECC----------CCEEEEEecCCCceEeeccc---------
Confidence 333222222 2223456788999997 4433322 25699998766432111000
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC-CCeeeEEEeecCCEEEEEEeCCC
Q 003363 432 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPV 510 (826)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~-~~~~~~~~s~dg~~l~~~~s~~~ 510 (826)
.+ .....+++++|| .|+++.. +...|+++|.++.....+.... .......++++|+ +++.....
T Consensus 190 -----~~-----~~p~~i~~d~~g-~l~v~~~--~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~- 254 (270)
T 1rwi_B 190 -----DI-----TAPWGIAVDEAG-TVYVTEH--NTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT-VYVADRGN- 254 (270)
T ss_dssp -----SC-----CSEEEEEECTTC-CEEEEET--TTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC-EEEEEGGG-
T ss_pred -----CC-----CCceEEEECCCC-CEEEEEC--CCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC-EEEEECCC-
Confidence 00 122356788898 4766543 3345788888776555443222 2233345566664 44443322
Q ss_pred CCCeEEEEee
Q 003363 511 DVPQVKYGYF 520 (826)
Q Consensus 511 ~p~~l~~~~~ 520 (826)
..|.++++
T Consensus 255 --~~v~~~~~ 262 (270)
T 1rwi_B 255 --DRVVKLTS 262 (270)
T ss_dssp --TEEEEECC
T ss_pred --CEEEEEcC
Confidence 23555554
No 442
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=98.29 E-value=2.7e-06 Score=92.40 Aligned_cols=108 Identities=13% Similarity=0.086 Sum_probs=66.5
Q ss_pred CCCcEEEEEcCCCCCC------CCccch----HHHHHHHHCCcEEEEECCCCCCCCchhhhhcC---------CCCCCc-
Q 003363 590 SCDPLIVVLHGGPHSV------SLSSYS----KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSL---------PGKVGS- 649 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~------~~~~~~----~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~---------~~~~~~- 649 (826)
+..|.||++||..... ....|. ..+..|+++||.|+++|++| +|.+..... ....+.
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G---~G~S~~~~~~l~~~i~~g~g~sg~~ 126 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSA---LASNHERAVELYYYLKGGRVDYGAA 126 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCS---SSCHHHHHHHHHHHHHCEEEECCHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCC---CCCCccchHHhhhhhhhcccccccc
Confidence 3456699999965431 123443 47888999999999999999 443321000 000000
Q ss_pred --------chHHHHHHHHHHHHHcCCCC-CCcEEEEEecchHHHHHHHHHh--------------------------CCC
Q 003363 650 --------QDVNDVLTAIDHVIDMGLAN-PSKVTVVGGSHGGFLTTHLIGQ--------------------------APD 694 (826)
Q Consensus 650 --------~~~~D~~~~i~~l~~~~~~d-~~rv~l~G~S~GG~~a~~~a~~--------------------------~p~ 694 (826)
.-.+|+.+. ++. +. .+++.|+||||||.++..++.. +|+
T Consensus 127 ~~~~~~~~~~a~dl~~l----l~~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~ 200 (431)
T 2hih_A 127 HSEKYGHERYGKTYEGV----LKD--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDN 200 (431)
T ss_dssp HHHHHTCCSEEEEECCS----CTT--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCS
T ss_pred ccccCCHHHHHHHHHHH----HHH--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCccc
Confidence 000011111 111 12 3789999999999999998765 688
Q ss_pred ceeEEEecCCcc
Q 003363 695 KFVAAAARNPLC 706 (826)
Q Consensus 695 ~~~a~v~~~p~~ 706 (826)
+++++|++++..
T Consensus 201 ~V~slv~i~tP~ 212 (431)
T 2hih_A 201 MVTSITTIATPH 212 (431)
T ss_dssp CEEEEEEESCCT
T ss_pred ceeEEEEECCCC
Confidence 999999888754
No 443
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.23 E-value=0.00018 Score=75.64 Aligned_cols=227 Identities=9% Similarity=-0.001 Sum_probs=131.6
Q ss_pred eEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCCC
Q 003363 167 KLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGS 245 (826)
Q Consensus 167 ~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~ 245 (826)
+|+|....+ +..++ .+.+...+....... .++.|++++++|+++-.
T Consensus 3 ~ll~~~~~~-----I~~i~~~~~~~~~~~~~~~~p----------~g~~~d~~~~~ly~~D~------------------ 49 (316)
T 1ijq_A 3 YLFFTNRHE-----VRKMTLDRSEYTSLIPNLRNV----------VALDTEVASNRIYWSDL------------------ 49 (316)
T ss_dssp EEEEECBSS-----EEEEETTSCCCEEEECSCSSE----------EEEEEETTTTEEEEEET------------------
T ss_pred EEEEECCCe-----EEEEECCCcceEehhcCCCce----------EEEEEEeCCCEEEEEEC------------------
Confidence 455654433 77777 444444444322233 58999999988887632
Q ss_pred CCccCCCCCCcceeecCCCccCCCccCceEEEEEccC----CceEeccCCCCC-CccceEEEeeCCCCCccEEEEEeecC
Q 003363 246 SDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININS----GEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSS 320 (826)
Q Consensus 246 ~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~----g~~~~l~~~~~~-~~~~~~~wSPDg~~~~~~lvf~~~~~ 320 (826)
....|+++++++ ...+.+ .... ..+..+++.+.++. |+++..
T Consensus 50 -------------------------~~~~I~~~~~~g~~~~~~~~~~--~~~~~~~p~glavd~~~~~----ly~~d~-- 96 (316)
T 1ijq_A 50 -------------------------SQRMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSN----IYWTDS-- 96 (316)
T ss_dssp -------------------------TTTEEEEEEC--------CEEE--ECSSCSCCCEEEEETTTTE----EEEEET--
T ss_pred -------------------------CCCcEEEEECCCCCCCcccEEE--EeCCCCCcCEEEEeecCCe----EEEEEC--
Confidence 236799999876 333333 2222 34567888887776 776642
Q ss_pred cceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCC-CCccccCceecCCCCEEEEEeccCCCCCCC
Q 003363 321 ETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGA 399 (826)
Q Consensus 321 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~ 399 (826)
....|.++++ ++...+.+.. ........++.|++.+|+|....
T Consensus 97 ------------~~~~I~~~~~-----------------~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~------- 140 (316)
T 1ijq_A 97 ------------VLGTVSVADT-----------------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG------- 140 (316)
T ss_dssp ------------TTTEEEEEET-----------------TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-------
T ss_pred ------------CCCEEEEEeC-----------------CCCceEEEEECCCCCcceEEeCCCCCEEEEEccC-------
Confidence 2236888887 5444444432 33445667889988888877532
Q ss_pred CcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCc
Q 003363 400 HSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGE 479 (826)
Q Consensus 400 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~ 479 (826)
....|+++++++...+.+... .+ .....++|+++++.||++- .....|+++|++++.
T Consensus 141 --~~~~I~~~~~dG~~~~~~~~~--------------~~-----~~P~gla~d~~~~~lY~~D--~~~~~I~~~d~dg~~ 197 (316)
T 1ijq_A 141 --TPAKIKKGGLNGVDIYSLVTE--------------NI-----QWPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGN 197 (316)
T ss_dssp --SSCEEEEEETTSCCEEEEECS--------------SC-----SCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCS
T ss_pred --CCCeEEEEcCCCCCeEEEEEC--------------CC-----CCceEEEEeccCCEEEEEE--CCCCeEEEEecCCCc
Confidence 125799999876332111000 00 0123678999988898864 344578999998776
Q ss_pred EEEecCCCC-CeeeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 003363 480 LLRITPAES-NFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 480 ~~~lt~~~~-~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
.+.+..... ...-..++.+++.+|++... ..+|+.++..
T Consensus 198 ~~~~~~~~~~~~~P~giav~~~~ly~~d~~---~~~V~~~~~~ 237 (316)
T 1ijq_A 198 RKTILEDEKRLAHPFSLAVFEDKVFWTDII---NEAIFSANRL 237 (316)
T ss_dssp CEEEEECTTTTSSEEEEEEETTEEEEEETT---TTEEEEEETT
T ss_pred eEEEeecCCccCCcEEEEEECCEEEEEECC---CCeEEEEeCC
Confidence 666643221 11112445567777776532 2457777643
No 444
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.22 E-value=0.0008 Score=70.96 Aligned_cols=115 Identities=11% Similarity=0.034 Sum_probs=61.3
Q ss_pred ccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCcccc
Q 003363 374 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 453 (826)
Q Consensus 374 ~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~ 453 (826)
....+++||+..|+..... ...|.++|..+++... .+..+.. ...+..+.++|
T Consensus 198 p~gia~d~~~g~l~v~d~~----------~~~I~~~~~~~G~~~~----------~~~~~~~-------~~~~~~~~~~p 250 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRE----------NGRIQCFKTDTKEFVR----------EIKHASF-------GRNVFAISYIP 250 (329)
T ss_dssp EEEEEEETTTTEEEEEETT----------TTEEEEEETTTCCEEE----------EECCTTT-------TTCEEEEEEET
T ss_pred CcEEEEECCCCEEEEEECC----------CCEEEEEECCCCcEEE----------EEecccc-------CCCcceeeecC
Confidence 5667899996666555432 3579999987554321 1111000 01222455667
Q ss_pred CCCEEEEEEE-----eCCeEEEEEEECCCCcEEEecC----CCCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeec
Q 003363 454 DGCTMLLSSI-----WGSSQVIISVNVSSGELLRITP----AESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 454 Dg~~l~~~~~-----~~~~~~l~~vdl~tg~~~~lt~----~~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
| .++.... ......++.+|+.+|++..... .........++++| .+++...... +|.+.++.
T Consensus 251 -g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~---~I~~~~~~ 321 (329)
T 3fvz_A 251 -G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTN---TVWKFTLT 321 (329)
T ss_dssp -T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSC---CEEEEEEE
T ss_pred -C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCC---EEEEEeCC
Confidence 3 2322211 1233478889988888776542 11123445677777 5555554433 46666654
No 445
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.21 E-value=0.00015 Score=73.26 Aligned_cols=181 Identities=18% Similarity=0.137 Sum_probs=105.7
Q ss_pred CceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhh
Q 003363 272 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (826)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (826)
...|.++|+++|++..-...+. ......++++|+. |+...| ....++++|.
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~g~~----lyv~t~--------------~~~~v~viD~--------- 93 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDD--SYFGEGLTLLNEK----LYQVVW--------------LKNIGFIYDR--------- 93 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTE----EEEEET--------------TCSEEEEEET---------
T ss_pred CCEEEEEECCCCCEEEEEecCC--CcceEEEEEeCCE----EEEEEe--------------cCCEEEEEEC---------
Confidence 4789999999998765411222 2222345666776 766664 2337999997
Q ss_pred hhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeee
Q 003363 352 LELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (826)
Q Consensus 352 ~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 430 (826)
++.+ ..++..+ ......+++||++|+ .++. ...|+++|..+.+... .+++-
T Consensus 94 --------~t~~v~~~i~~g--~~~g~glt~Dg~~l~-vs~g----------s~~l~viD~~t~~v~~-------~I~Vg 145 (266)
T 2iwa_A 94 --------RTLSNIKNFTHQ--MKDGWGLATDGKILY-GSDG----------TSILYEIDPHTFKLIK-------KHNVK 145 (266)
T ss_dssp --------TTTEEEEEEECC--SSSCCEEEECSSSEE-EECS----------SSEEEEECTTTCCEEE-------EEECE
T ss_pred --------CCCcEEEEEECC--CCCeEEEEECCCEEE-EECC----------CCeEEEEECCCCcEEE-------EEEEC
Confidence 5543 3344322 122345889999876 4532 2679999987754321 11111
Q ss_pred eccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC--------------CCeeeEEEe
Q 003363 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--------------SNFSWSLLT 496 (826)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~--------------~~~~~~~~s 496 (826)
..+. .+ ..+..+.|. || .||.. .+ ....|.+||+++|++.....-. .......++
T Consensus 146 ~~~~--p~-----~~~nele~~-dg-~lyvn-~~-~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 146 YNGH--RV-----IRLNELEYI-NG-EVWAN-IW-QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp ETTE--EC-----CCEEEEEEE-TT-EEEEE-ET-TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred CCCc--cc-----ccceeEEEE-CC-EEEEe-cC-CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEc
Confidence 0000 00 012245566 67 56644 33 3457999999999876443211 122445789
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 497 LDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 497 ~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
++++.+++..... +.++.+++...
T Consensus 215 ~~~~~lfVTgk~~---~~v~~i~l~~~ 238 (266)
T 2iwa_A 215 QENKRIFVTGKLW---PKLFEIKLHLV 238 (266)
T ss_dssp TTTTEEEEEETTC---SEEEEEEEEEC
T ss_pred CCCCEEEEECCCC---CeEEEEEEecc
Confidence 9999888777555 45888887543
No 446
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.19 E-value=0.00016 Score=78.27 Aligned_cols=177 Identities=11% Similarity=0.013 Sum_probs=107.5
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhh
Q 003363 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (826)
..|++++++++..+.+. ..+......+++.+.+.. |+++-. ....|+++++
T Consensus 138 ~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~----lY~~d~--------------~~~~I~~~~~---------- 188 (386)
T 3v65_B 138 DRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDK----LYWTDS--------------GTSRIEVANL---------- 188 (386)
T ss_dssp TEEEEEETTSCCEEEEE-CSSCSCCCCEEEETTTTE----EEEEET--------------TTTEEEECBT----------
T ss_pred CcEEEEecCCCCcEEEE-eCCCCCccEEEEEeCCCe----EEEEcC--------------CCCeEEEEeC----------
Confidence 67999999988766652 122234567888888887 877652 2236888887
Q ss_pred hhhcCCCCCCcceecC-CCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeee
Q 003363 353 ELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 431 (826)
Q Consensus 353 ~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 431 (826)
++...+.+. .........++.|++.+|+|..... ...|+++++++...+.+....
T Consensus 189 -------dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~~-------- 244 (386)
T 3v65_B 189 -------DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---------TPRIEASSMDGSGRRIIADTH-------- 244 (386)
T ss_dssp -------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEEEECSS--------
T ss_pred -------CCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC---------CCEEEEEeCCCCCcEEEEECC--------
Confidence 444444443 2334456678899998888775431 367999998764432211100
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCC
Q 003363 432 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 511 (826)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~ 511 (826)
-. ....++|+++++.||++- .....|+++|++++..+.+...... .-..++.+++.+|++...
T Consensus 245 ----~~-------~PnGlavd~~~~~lY~aD--~~~~~I~~~d~dG~~~~~~~~~~~~-~P~giav~~~~ly~td~~--- 307 (386)
T 3v65_B 245 ----LF-------WPNGLTIDYAGRRMYWVD--AKHHVIERANLDGSHRKAVISQGLP-HPFAITVFEDSLYWTDWH--- 307 (386)
T ss_dssp ----CS-------CEEEEEEEGGGTEEEEEE--TTTTEEEEECTTSCSCEEEECSSCS-SEEEEEEETTEEEEEETT---
T ss_pred ----CC-------CeeeEEEeCCCCEEEEEE--CCCCEEEEEeCCCCeeEEEEECCCC-CceEEEEECCEEEEeeCC---
Confidence 00 123678998888898873 3445799999987666655433221 112344466777666532
Q ss_pred CCeEEEEe
Q 003363 512 VPQVKYGY 519 (826)
Q Consensus 512 p~~l~~~~ 519 (826)
...|..++
T Consensus 308 ~~~V~~~~ 315 (386)
T 3v65_B 308 TKSINSAN 315 (386)
T ss_dssp TTEEEEEE
T ss_pred CCeEEEEE
Confidence 23466665
No 447
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.19 E-value=0.00036 Score=74.30 Aligned_cols=177 Identities=11% Similarity=0.013 Sum_probs=107.4
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhh
Q 003363 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (826)
..|++++++++..+.+. ..+-.....+++.+.+.. |+++.. ....|+++++
T Consensus 95 ~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~----ly~~d~--------------~~~~I~~~~~---------- 145 (349)
T 3v64_C 95 DRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDK----LYWTDS--------------GTSRIEVANL---------- 145 (349)
T ss_dssp TEEEEEETTSCSCEEEE-CSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET----------
T ss_pred CceEEEecCCCCceEEE-eCCCCCccEEEEecCCCe----EEEEcC--------------CCCeEEEEcC----------
Confidence 67999999988766651 122234567888888887 877652 2237889997
Q ss_pred hhhcCCCCCCcceecC-CCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeee
Q 003363 353 ELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 431 (826)
Q Consensus 353 ~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 431 (826)
++...+.+. .........++.|++..|+|..... ...|+++++++...+.+....
T Consensus 146 -------dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~~-------- 201 (349)
T 3v64_C 146 -------DGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN---------TPRIEASSMDGSGRRIIADTH-------- 201 (349)
T ss_dssp -------TSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCSCEESCCSS--------
T ss_pred -------CCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC---------CCEEEEEeCCCCCcEEEEECC--------
Confidence 444444443 3334456778999888888776431 267999998775433221100
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCCC
Q 003363 432 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPVD 511 (826)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~~ 511 (826)
-. ....++|+++++.||++- .+...|+++|++++..+.+...... .-..++.+++.++++-...
T Consensus 202 ----~~-------~PnGla~d~~~~~lY~aD--~~~~~I~~~~~dG~~~~~~~~~~~~-~P~giav~~~~ly~td~~~-- 265 (349)
T 3v64_C 202 ----LF-------WPNGLTIDYAGRRMYWVD--AKHHVIERANLDGSHRKAVISQGLP-HPFAITVFEDSLYWTDWHT-- 265 (349)
T ss_dssp ----CS-------CEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECSSCS-SEEEEEEETTEEEEEETTT--
T ss_pred ----CC-------CcceEEEeCCCCEEEEEE--CCCCEEEEEeCCCCceEEEEeCCCC-CceEEEEECCEEEEecCCC--
Confidence 00 123678999888898873 3445899999987666655433221 1123344566666654332
Q ss_pred CCeEEEEe
Q 003363 512 VPQVKYGY 519 (826)
Q Consensus 512 p~~l~~~~ 519 (826)
..|..++
T Consensus 266 -~~V~~~~ 272 (349)
T 3v64_C 266 -KSINSAN 272 (349)
T ss_dssp -TEEEEEE
T ss_pred -CeEEEEE
Confidence 3466555
No 448
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=98.19 E-value=6.1e-06 Score=88.32 Aligned_cols=103 Identities=15% Similarity=0.168 Sum_probs=65.1
Q ss_pred CCcEEEEEcCCCCCCCC-----ccch----HHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHH
Q 003363 591 CDPLIVVLHGGPHSVSL-----SSYS----KSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDH 661 (826)
Q Consensus 591 ~~P~vv~~HGg~~~~~~-----~~~~----~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~ 661 (826)
..|.||++||..+.... ..|. ..++.|+++||.|+++|++| +|.... ...++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g---~G~s~~----------~a~~l~~~i~~ 71 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGP---LSSNWD----------RACEAYAQLVG 71 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCS---SBCHHH----------HHHHHHHHHHC
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCC---CCCccc----------cHHHHHHHHHh
Confidence 34558999996543211 1243 34588999999999999998 443321 11222222221
Q ss_pred --------HHHc---------------CCCCCCcEEEEEecchHHHHHHHHHh-------------------CC------
Q 003363 662 --------VIDM---------------GLANPSKVTVVGGSHGGFLTTHLIGQ-------------------AP------ 693 (826)
Q Consensus 662 --------l~~~---------------~~~d~~rv~l~G~S~GG~~a~~~a~~-------------------~p------ 693 (826)
+.+. .....+++.|+||||||.++..++.+ +|
T Consensus 72 ~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~ 151 (387)
T 2dsn_A 72 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGH 151 (387)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCC
T ss_pred hhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccc
Confidence 1100 00235789999999999999998872 35
Q ss_pred CceeEEEecCCcc
Q 003363 694 DKFVAAAARNPLC 706 (826)
Q Consensus 694 ~~~~a~v~~~p~~ 706 (826)
++++.+|++++..
T Consensus 152 ~~V~sLV~i~tP~ 164 (387)
T 2dsn_A 152 HFVLSVTTIATPH 164 (387)
T ss_dssp CCEEEEEEESCCT
T ss_pred cceeEEEEECCCC
Confidence 7899999887643
No 449
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.14 E-value=0.00022 Score=71.97 Aligned_cols=205 Identities=9% Similarity=0.002 Sum_probs=116.6
Q ss_pred EEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 003363 157 SAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (826)
Q Consensus 157 ~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~ 235 (826)
....++||| + +|++....+...+..++ ..++..+.+.+.... .+..+.++|++|+....
T Consensus 24 ~Gl~~~~dg-~-Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~----------fgeGi~~~g~~lyv~t~-------- 83 (266)
T 2iwa_A 24 QGLVYAEND-T-LFESTGLYGRSSVRQVALQTGKVENIHKMDDSY----------FGEGLTLLNEKLYQVVW-------- 83 (266)
T ss_dssp EEEEECSTT-E-EEEEECSTTTCEEEEEETTTCCEEEEEECCTTC----------CEEEEEEETTEEEEEET--------
T ss_pred ccEEEeCCC-e-EEEECCCCCCCEEEEEECCCCCEEEEEecCCCc----------ceEEEEEeCCEEEEEEe--------
Confidence 467889996 4 45555322556788888 677777777665443 22234455777766533
Q ss_pred ccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEE
Q 003363 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 315 (826)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf 315 (826)
....++++|.++.++..- ++.. .......++||++ ++.
T Consensus 84 -----------------------------------~~~~v~viD~~t~~v~~~--i~~g-~~~g~glt~Dg~~----l~v 121 (266)
T 2iwa_A 84 -----------------------------------LKNIGFIYDRRTLSNIKN--FTHQ-MKDGWGLATDGKI----LYG 121 (266)
T ss_dssp -----------------------------------TCSEEEEEETTTTEEEEE--EECC-SSSCCEEEECSSS----EEE
T ss_pred -----------------------------------cCCEEEEEECCCCcEEEE--EECC-CCCeEEEEECCCE----EEE
Confidence 236899999998876543 2211 1223558899998 764
Q ss_pred EeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCC--c---cccCceecCCCCEEEEE
Q 003363 316 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESI--S---SAFFPRFSPDGKFLVFL 389 (826)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~--~---~~~~p~~SpDG~~l~f~ 389 (826)
++ ....|+.+|. ++.+ ...+.-+. . ......|. || +| |.
T Consensus 122 -s~--------------gs~~l~viD~-----------------~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~l-yv 166 (266)
T 2iwa_A 122 -SD--------------GTSILYEIDP-----------------HTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EV-WA 166 (266)
T ss_dssp -EC--------------SSSEEEEECT-----------------TTCCEEEEEECEETTEECCCEEEEEEE-TT-EE-EE
T ss_pred -EC--------------CCCeEEEEEC-----------------CCCcEEEEEEECCCCcccccceeEEEE-CC-EE-EE
Confidence 42 2237999997 4443 33333221 1 12344566 77 44 55
Q ss_pred eccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCC---CCCcccccCCCCCCccccCCCEEEEEEEeCC
Q 003363 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEG---DCFPGLYSSSILSNPWLSDGCTMLLSSIWGS 466 (826)
Q Consensus 390 s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~ 466 (826)
... ...+|.++|..+++... .+++-....+ ...+ ....+..++|+||++++|++. ..
T Consensus 167 n~~---------~~~~V~vID~~tg~V~~-------~I~~~g~~~~~~~~~~~--~~~v~nGIa~~~~~~~lfVTg--k~ 226 (266)
T 2iwa_A 167 NIW---------QTDCIARISAKDGTLLG-------WILLPNLRKKLIDEGFR--DIDVLNGIAWDQENKRIFVTG--KL 226 (266)
T ss_dssp EET---------TSSEEEEEETTTCCEEE-------EEECHHHHHHHHHTTCT--TCCCEEEEEEETTTTEEEEEE--TT
T ss_pred ecC---------CCCeEEEEECCCCcEEE-------EEECCCccccccccccc--ccCceEEEEEcCCCCEEEEEC--CC
Confidence 443 23689999998876421 1111000000 0000 001234778999999888764 44
Q ss_pred eEEEEEEECCCC
Q 003363 467 SQVIISVNVSSG 478 (826)
Q Consensus 467 ~~~l~~vdl~tg 478 (826)
...|+.+++...
T Consensus 227 ~~~v~~i~l~~~ 238 (266)
T 2iwa_A 227 WPKLFEIKLHLV 238 (266)
T ss_dssp CSEEEEEEEEEC
T ss_pred CCeEEEEEEecc
Confidence 567888887543
No 450
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.14 E-value=0.00049 Score=71.76 Aligned_cols=228 Identities=13% Similarity=0.113 Sum_probs=119.2
Q ss_pred cEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 003363 156 ASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (826)
Q Consensus 156 ~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~ 235 (826)
...++|+|+|+ |+++ +. ....++.++..+............ .++.++|||+ | |++....
T Consensus 34 pegia~~~~g~-lyv~-d~--~~~~I~~~d~~g~~~~~~~~~~~p----------~gia~~~dG~-l-~vad~~~----- 92 (306)
T 2p4o_A 34 LENLASAPDGT-IFVT-NH--EVGEIVSITPDGNQQIHATVEGKV----------SGLAFTSNGD-L-VATGWNA----- 92 (306)
T ss_dssp EEEEEECTTSC-EEEE-ET--TTTEEEEECTTCCEEEEEECSSEE----------EEEEECTTSC-E-EEEEECT-----
T ss_pred cceEEECCCCC-EEEE-eC--CCCeEEEECCCCceEEEEeCCCCc----------eeEEEcCCCc-E-EEEeccC-----
Confidence 55789999997 5444 32 223577777555555544443333 6889999998 4 4443210
Q ss_pred ccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEE
Q 003363 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 315 (826)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf 315 (826)
....|+.+|..+|+++.+...+.......++..+++. +++
T Consensus 93 -----------------------------------~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~-----~~v 132 (306)
T 2p4o_A 93 -----------------------------------DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQ-----YLT 132 (306)
T ss_dssp -----------------------------------TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSE-----EEE
T ss_pred -----------------------------------CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCc-----EEE
Confidence 1235888888888877653222211222334334332 433
Q ss_pred EeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCC--cce---------ecCCCCccccCceecCCCC
Q 003363 316 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDL--PVV---------NLTESISSAFFPRFSPDGK 384 (826)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~--~~~---------~Lt~~~~~~~~p~~SpDG~ 384 (826)
+.. ....||++|. .++ ... ........... .+|||+
T Consensus 133 -~d~-------------~~g~i~~~d~-----------------~~~~~~v~~~~~~~~~~~~~~~~~~png--is~dg~ 179 (306)
T 2p4o_A 133 -ADS-------------YRGAIWLIDV-----------------VQPSGSIWLEHPMLARSNSESVFPAANG--LKRFGN 179 (306)
T ss_dssp -EET-------------TTTEEEEEET-----------------TTTEEEEEEECGGGSCSSTTCCSCSEEE--EEEETT
T ss_pred -EEC-------------CCCeEEEEeC-----------------CCCcEeEEEECCccccccccCCCCcCCC--cCcCCC
Confidence 321 2337888886 222 111 00011111122 289999
Q ss_pred EEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEe
Q 003363 385 FLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW 464 (826)
Q Consensus 385 ~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~ 464 (826)
+|++.... ..+|+++++++.+.. . ........ .....+++++||+ ||++. .
T Consensus 180 ~lyv~d~~----------~~~I~~~~~~~~g~~--~-~~~~~~~~--------------~~P~gi~vd~dG~-l~va~-~ 230 (306)
T 2p4o_A 180 FLYVSNTE----------KMLLLRIPVDSTDKP--G-EPEIFVEQ--------------TNIDDFAFDVEGN-LYGAT-H 230 (306)
T ss_dssp EEEEEETT----------TTEEEEEEBCTTSCB--C-CCEEEEES--------------CCCSSEEEBTTCC-EEEEC-B
T ss_pred EEEEEeCC----------CCEEEEEEeCCCCCC--C-ccEEEecc--------------CCCCCeEECCCCC-EEEEe-C
Confidence 87666543 367999998763221 0 00001110 1234678899996 65543 2
Q ss_pred CCeEEEEEEECCCCcEEEe---cCCCCCeeeEEEe---ecCCEEEEEEeC
Q 003363 465 GSSQVIISVNVSSGELLRI---TPAESNFSWSLLT---LDGDNIIAVSSS 508 (826)
Q Consensus 465 ~~~~~l~~vdl~tg~~~~l---t~~~~~~~~~~~s---~dg~~l~~~~s~ 508 (826)
+...|.++|.+ |+...+ ...........|. ++++.||+....
T Consensus 231 -~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 231 -IYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp -TTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred -CCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 23457778875 665443 2221223334565 677777766554
No 451
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.13 E-value=0.00015 Score=80.17 Aligned_cols=264 Identities=15% Similarity=0.121 Sum_probs=140.0
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCcc
Q 003363 160 VPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFS 237 (826)
Q Consensus 160 ~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~ 237 (826)
.+++||++|+.....+ .+.+|+ .++..+.+ . +..+.| ..+.|+ ++.|+..+.+.... .|+
T Consensus 124 ~~~~~g~~l~sg~~dg-----~i~vwd~~~~~~~~~~--~-~h~~~v------~~~~~~--~~~l~s~~~dg~i~--vwd 185 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDN-----TLKVWSAVTGKCLRTL--V-GHTGGV------WSSQMR--DNIIISGSTDRTLK--VWN 185 (445)
T ss_dssp EEEEETTEEEEEETTS-----CEEEEETTTCCEEEEC--C-CCSSCE------EEEEEE--TTEEEEEETTSCEE--EEE
T ss_pred EEEEcCCEEEEEECCC-----cEEEEECCCCcEEEEE--c-CCCCCE------EEEEec--CCEEEEEeCCCeEE--EEE
Confidence 5777899998876543 466773 33333222 1 222333 677776 55777777665433 232
Q ss_pred CCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEe
Q 003363 238 LGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVG 317 (826)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~ 317 (826)
............+........|.++ ..+++..+..|.+||+.+++..... ......+..+.| ||+. |+..+
T Consensus 186 ~~~~~~~~~~~~h~~~v~~~~~~~~--~l~s~s~dg~i~~wd~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~~~~ 256 (445)
T 2ovr_B 186 AETGECIHTLYGHTSTVRCMHLHEK--RVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY--DGRR----VVSGA 256 (445)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEETT--EEEEEETTSEEEEEESSSCCEEEEE-ECCSSCEEEEEE--CSSC----EEEEE
T ss_pred CCcCcEEEEECCCCCcEEEEEecCC--EEEEEeCCCEEEEEECCCCcEEEEE-cCCcccEEEEEE--CCCE----EEEEc
Confidence 2111111111223333333444332 3455566789999999988755431 222334555666 8887 77665
Q ss_pred ecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEeccCCCC
Q 003363 318 WSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVD 396 (826)
Q Consensus 318 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~ 396 (826)
.+..|..+|+ .+++ ...+..+...+....| ||++|+..+.+
T Consensus 257 ---------------~dg~i~iwd~-----------------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---- 298 (445)
T 2ovr_B 257 ---------------YDFMVKVWDP-----------------ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLD---- 298 (445)
T ss_dssp ---------------TTSCEEEEEG-----------------GGTEEEEEECCCSSCEEEEEE--CSSEEEEEETT----
T ss_pred ---------------CCCEEEEEEC-----------------CCCcEeEEecCCCCceEEEEE--CCCEEEEEeCC----
Confidence 3347888887 3333 4455555566666677 88888766654
Q ss_pred CCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECC
Q 003363 397 SGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVS 476 (826)
Q Consensus 397 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~ 476 (826)
..|.+||+.+++......... .. ...++++++.| ++...++ .|..+|+.
T Consensus 299 -------~~i~i~d~~~~~~~~~~~~~~-------------------~~--v~~~~~~~~~l-~~~~~dg--~i~vwd~~ 347 (445)
T 2ovr_B 299 -------TSIRVWDVETGNCIHTLTGHQ-------------------SL--TSGMELKDNIL-VSGNADS--TVKIWDIK 347 (445)
T ss_dssp -------SCEEEEETTTCCEEEEECCCC-------------------SC--EEEEEEETTEE-EEEETTS--CEEEEETT
T ss_pred -------CeEEEEECCCCCEEEEEcCCc-------------------cc--EEEEEEeCCEE-EEEeCCC--eEEEEECC
Confidence 358999988765321110000 01 11344567655 4444444 45556887
Q ss_pred CCcEEEecCCC--CCeeeEEEeecCCEEEEEEeCCCCCCeEEEEeeccc
Q 003363 477 SGELLRITPAE--SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYFVDK 523 (826)
Q Consensus 477 tg~~~~lt~~~--~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~~~~ 523 (826)
+++........ .......++.+++.++... .. ..|.+.++.++
T Consensus 348 ~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~-~d---g~v~iwd~~~~ 392 (445)
T 2ovr_B 348 TGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS-DD---GTVKLWDLKTG 392 (445)
T ss_dssp TCCEEEEECSTTSCSSCEEEEEECSSEEEEEE-TT---SEEEEEETTTC
T ss_pred CCcEEEEEccCCCCCCCEEEEEECCCEEEEEe-CC---CeEEEEECCCC
Confidence 77765443321 1122234455665544433 22 24666665443
No 452
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.12 E-value=0.00033 Score=76.45 Aligned_cols=159 Identities=11% Similarity=0.165 Sum_probs=89.0
Q ss_pred EEeCCCCCeEEEEecCCCCCCeEEEEec-CCceeEEE-ecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCc
Q 003363 159 VVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEF-HVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTF 236 (826)
Q Consensus 159 ~~~SPdG~~la~~~~~~~~~~~~~~i~~-~~~~~~~~-~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~ 236 (826)
++|+|+|+.|++..... ...++.+.. ++...+.. .+..... ....+++++|++..|++. ..
T Consensus 176 ia~~~~g~~l~~~d~~~--~~~I~~~d~~~~~~~~~~g~~~~~~~------~~p~~iav~p~~g~lyv~-d~-------- 238 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEG--THTVYVYMKASGWAPTRIGQLGSTFS------GKIGAVALDETEEWLYFV-DS-------- 238 (409)
T ss_dssp CEECTTSSEEEEEBSST--TCEEEEEEGGGTTCEEEEEECCTTSC------SCCCBCEECTTSSEEEEE-CT--------
T ss_pred eeEecCCCcEEEEecCC--CceEEEEEcCCCceeEEeeeccchhc------CCcEEEEEeCCCCeEEEE-EC--------
Confidence 89999999886654422 226777773 33322222 1111010 112688999976677773 21
Q ss_pred cCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccC--CCCCC--ccc-eEEEeeCCCCCcc
Q 003363 237 SLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG--IPKSL--SVG-QVVWAPLNEGLHQ 311 (826)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~--~~~~~--~~~-~~~wSPDg~~~~~ 311 (826)
...|+++|.+++....+.+ ..... ... .++|+|++..
T Consensus 239 -----------------------------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~--- 280 (409)
T 3hrp_A 239 -----------------------------------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN--- 280 (409)
T ss_dssp -----------------------------------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE---
T ss_pred -----------------------------------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE---
Confidence 2479999998887655411 11111 223 8999998776
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCC---------------CccccC
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTES---------------ISSAFF 376 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~---------------~~~~~~ 376 (826)
|+++. . ....|++++. ++. ...+... ......
T Consensus 281 -lyv~d-~-------------~~~~I~~~~~-----------------~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~g 327 (409)
T 3hrp_A 281 -FYMSD-Q-------------NLSSVYKITP-----------------DGE-CEWFCGSATQKTVQDGLREEALFAQPNG 327 (409)
T ss_dssp -EEEEE-T-------------TTTEEEEECT-----------------TCC-EEEEEECTTCCSCBCEEGGGCBCSSEEE
T ss_pred -EEEEe-C-------------CCCEEEEEec-----------------CCC-EEEEEeCCCCCCcCCCcccccEeCCCeE
Confidence 76654 1 2236778875 221 2222111 122456
Q ss_pred ceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCC
Q 003363 377 PRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 377 p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
.+++|||+ |++..... ...|+++++.++.
T Consensus 328 ia~d~dG~-lyvad~~~---------~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 328 MTVDEDGN-FYIVDGFK---------GYCLRKLDILDGY 356 (409)
T ss_dssp EEECTTCC-EEEEETTT---------TCEEEEEETTTTE
T ss_pred EEEeCCCC-EEEEeCCC---------CCEEEEEECCCCE
Confidence 78999998 54443202 3679999976644
No 453
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.07 E-value=0.00015 Score=77.46 Aligned_cols=82 Identities=9% Similarity=-0.035 Sum_probs=50.2
Q ss_pred ceecCCCCEEEEEec-c-CCCCCCCCcccceEEEEeCCCCCCCC-cccceeeeeeeeeccCCCCCcccccCCCCCCcccc
Q 003363 377 PRFSPDGKFLVFLSA-K-SSVDSGAHSATDSLHRIDWPTNGNFS-SLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLS 453 (826)
Q Consensus 377 p~~SpDG~~l~f~s~-~-~~~~~g~~~~~~~l~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~ 453 (826)
..++|||++|+.... . .... + ....+.++|+.+.+... +..+. ....+.|++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~-~---~~~~~~ViD~~t~~vv~~i~vg~---------------------~p~gi~~s~ 323 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCL-A---AAENTSSVTASVGQTSGPISNGH---------------------DSDAIIAAQ 323 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTT-S---CEEEEEEEESSSCCEEECCEEEE---------------------EECEEEECC
T ss_pred eEEcCCCCEEEEEeccccCccc-c---cCCCEEEEECCCCeEEEEEECCC---------------------CcceEEECC
Confidence 579999999766543 1 1000 0 01345699998865421 11111 123678999
Q ss_pred CCCEEEEEEEeCCeEEEEEEECCCCcEEEec
Q 003363 454 DGCTMLLSSIWGSSQVIISVNVSSGELLRIT 484 (826)
Q Consensus 454 Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt 484 (826)
||++++++.. .+...|..+|+.++++..-.
T Consensus 324 Dg~~l~va~~-~~~~~VsVID~~t~kvv~~I 353 (368)
T 1mda_H 324 DGASDNYANS-AGTEVLDIYDAASDQDQSSV 353 (368)
T ss_dssp SSSCEEEEEE-TTTTEEEEEESSSCEEEEEC
T ss_pred CCCEEEEEcc-CCCCeEEEEECCCCcEEEEE
Confidence 9998877654 23456888999998876543
No 454
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.06 E-value=0.00016 Score=80.63 Aligned_cols=119 Identities=11% Similarity=0.059 Sum_probs=69.3
Q ss_pred cEEEEeCC-----CCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceee-c-CCCCeEEEEee
Q 003363 156 ASAVVPSP-----SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISW-N-SDETLIAYVAE 227 (826)
Q Consensus 156 ~~~~~~SP-----dG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~w-S-PDg~~ia~~~~ 227 (826)
.-.|..|. ||++|.. .+. ....+-+|+ +..+..+++.++.+. + ..++++ + ||+++|+...+
T Consensus 87 ~hh~~~s~t~g~~DG~~lfV-nd~--~~~rVavIdl~t~~~~~ii~ip~g~-~-------phg~~~~~~p~~~~v~~~~~ 155 (595)
T 1fwx_A 87 LHHVHMSFTEGKYDGRFLFM-NDK--ANTRVARVRCDVMKCDAILEIPNAK-G-------IHGLRPQKWPRSNYVFCNGE 155 (595)
T ss_dssp BCCEEEEEETTEEEEEEEEE-EET--TTTEEEEEETTTTEEEEEEECSSCC-S-------EEEEEECCSSBCSEEEEEEC
T ss_pred CCccccCCCCCCcCCCEEEE-EcC--CCCEEEEEECCCceEeeEEeCCCCC-C-------CcceeeeecCCCcEEEEecc
Confidence 34477777 9988855 332 456788888 666777777765432 0 146776 6 99999855544
Q ss_pred cCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC
Q 003363 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 307 (826)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~ 307 (826)
...+-.+ .++.. +.++ .....+-++|.++.++..- ++-......+..||||+
T Consensus 156 ~~~p~~~--------dg~~l-----------~~~~-------~~~~~vtvID~~t~~v~~q--I~Vgg~pd~~~~spdGk 207 (595)
T 1fwx_A 156 DETPLVN--------DGTNM-----------EDVA-------NYVNVFTAVDADKWEVAWQ--VLVSGNLDNCDADYEGK 207 (595)
T ss_dssp SCEESSC--------SSSST-----------TCGG-------GEEEEEEEEETTTTEEEEE--EEESSCCCCEEECSSSS
T ss_pred cccccCC--------CCccc-----------cccc-------ccCceEEEEECCCCeEEEE--EEeCCCccceEECCCCC
Confidence 3321100 00000 0011 1346788999998876533 12111456788999999
Q ss_pred CCccEEEEEe
Q 003363 308 GLHQYLVFVG 317 (826)
Q Consensus 308 ~~~~~lvf~~ 317 (826)
+ ++.++
T Consensus 208 ~----~~vt~ 213 (595)
T 1fwx_A 208 W----AFSTS 213 (595)
T ss_dssp E----EEEEE
T ss_pred E----EEEEe
Confidence 6 55544
No 455
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.05 E-value=0.00048 Score=74.88 Aligned_cols=180 Identities=8% Similarity=-0.033 Sum_probs=107.0
Q ss_pred ceEEEEEccC----CceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccch
Q 003363 273 PSLFVININS----GEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 348 (826)
Q Consensus 273 ~~l~v~d~~~----g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 348 (826)
..|+.+++++ +..+.+. ...-.....+++.+.++. |+++-. ....|+++++
T Consensus 134 ~~I~~~~~~g~~~~~~~~~~~-~~~~~~p~glavD~~~~~----lY~~d~--------------~~~~I~~~~~------ 188 (400)
T 3p5b_L 134 RMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT------ 188 (400)
T ss_dssp TEEEEEEC------CCCEEEE-CSSCSCEEEEEEETTTTE----EEEEET--------------TTTEEEEECT------
T ss_pred CeEEEEEcccCCCCCcceEEE-eCCCCCcccEEEEecCCc----eEEEEC--------------CCCeEEEEeC------
Confidence 5788888876 2333331 112234567788887776 777642 2236888887
Q ss_pred hhhhhhhcCCCCCCcceecCC-CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeee
Q 003363 349 ASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 427 (826)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 427 (826)
++...+.+.. ........++.|.+.+|+|..... ...|+++++++...+.+....
T Consensus 189 -----------~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~---------~~~I~~~~~dG~~~~~~~~~~---- 244 (400)
T 3p5b_L 189 -----------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTEN---- 244 (400)
T ss_dssp -----------TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS---------SCCEEEEETTSCSCEEEECSS----
T ss_pred -----------CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC---------CCEEEEEeCCCCccEEEEECC----
Confidence 5555444443 333456678999888888776432 246999998774432221100
Q ss_pred eeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCC-eeeEEEeecCCEEEEEE
Q 003363 428 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESN-FSWSLLTLDGDNIIAVS 506 (826)
Q Consensus 428 ~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~-~~~~~~s~dg~~l~~~~ 506 (826)
+ .....++++++++.||++- .....|+++|++++..+.+...... ..-..++.+++.+|++.
T Consensus 245 ----------l-----~~P~glavd~~~~~lY~aD--~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd 307 (400)
T 3p5b_L 245 ----------I-----QWPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 307 (400)
T ss_dssp ----------C-----SCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEE
T ss_pred ----------C-----CceEEEEEEeCCCEEEEEE--CCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEec
Confidence 0 0123678898888898863 3456799999988777766543221 12235566788877776
Q ss_pred eCCCCCCeEEEEeec
Q 003363 507 SSPVDVPQVKYGYFV 521 (826)
Q Consensus 507 s~~~~p~~l~~~~~~ 521 (826)
... ..|+.++..
T Consensus 308 ~~~---~~V~~~~~~ 319 (400)
T 3p5b_L 308 IIN---EAIFSANRL 319 (400)
T ss_dssp SSS---CSEEEEESS
T ss_pred CCC---CeEEEEEcC
Confidence 433 347766643
No 456
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.03 E-value=0.0011 Score=69.47 Aligned_cols=160 Identities=9% Similarity=0.022 Sum_probs=101.9
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCce-eEEEecC-CCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQL-EKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~-~~~~~~~-~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
......|.+.++.|+++... ...++.+. +++.. ..+.... ... .++++.+.+..|++.-.
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~---~~~I~r~~~~g~~~~~~~~~~~l~~p----------~glavd~~~g~ly~~d~---- 98 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVS---EEAIKRTEFNKTESVQNVVVSGLLSP----------DGLACDWLGEKLYWTDS---- 98 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETT---TTEEEEEETTSSSCCCEEEEECCSCC----------CEEEEETTTTEEEEEET----
T ss_pred ccEEEEEEeCCCEEEEEECC---CCcEEEEEccCCCceEEEEcCCCCCc----------cEEEEEcCCCeEEEEEC----
Confidence 45678899988888776432 23566666 33321 2222211 122 57888888887877521
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (826)
....|.++++++...+.+. ...-.....++..|++..
T Consensus 99 ---------------------------------------~~~~I~~~~~dG~~~~~l~-~~~~~~P~giavdp~~g~--- 135 (318)
T 3sov_A 99 ---------------------------------------ETNRIEVSNLDGSLRKVLF-WQELDQPRAIALDPSSGF--- 135 (318)
T ss_dssp ---------------------------------------TTTEEEEEETTSCSCEEEE-CSSCSSEEEEEEEGGGTE---
T ss_pred ---------------------------------------CCCEEEEEECCCCcEEEEE-eCCCCCccEEEEeCCCCE---
Confidence 2367999999877666552 122235667889998776
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceec-CCCCccccCceecCCCCEEEEEe
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-TESISSAFFPRFSPDGKFLVFLS 390 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L-t~~~~~~~~p~~SpDG~~l~f~s 390 (826)
|+++.+. ....|+++++ ++...+.+ ..........+|+|++++|+|..
T Consensus 136 -ly~td~~-------------~~~~I~r~~~-----------------dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 136 -MYWTDWG-------------EVPKIERAGM-----------------DGSSRFIIINSEIYWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp -EEEEECS-------------SSCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred -EEEEecC-------------CCCEEEEEEc-----------------CCCCeEEEEECCCCCccEEEEeccCCEEEEEE
Confidence 7776532 1237999997 44444444 33344456789999999998887
Q ss_pred ccCCCCCCCCcccceEEEEeCCCCC
Q 003363 391 AKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 391 ~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
.. ...|+++|+++..
T Consensus 185 ~~----------~~~I~~~d~dG~~ 199 (318)
T 3sov_A 185 AK----------LNFIHKSNLDGTN 199 (318)
T ss_dssp TT----------TTEEEEEETTSCS
T ss_pred CC----------CCEEEEEcCCCCc
Confidence 54 3679999987644
No 457
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.03 E-value=0.00049 Score=73.13 Aligned_cols=110 Identities=11% Similarity=-0.020 Sum_probs=56.9
Q ss_pred ccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccce-eeeeeeeeccCCCCCcccccCCCCCCccc
Q 003363 374 AFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKI-VDVIPVVQCAEGDCFPGLYSSSILSNPWL 452 (826)
Q Consensus 374 ~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~f~g~~~~~~~~~~ws 452 (826)
....+|||||+.|++..... ..||.++........+.... ...+.... . ......++++
T Consensus 197 ~~gia~s~dg~~ly~~~~~~----------~~l~~~~~~~~~~~~~~~~~~~~~~~~~g---~-------~g~pdgia~d 256 (343)
T 2qe8_A 197 VNGIVLDAENEWLYLSPMHS----------TSMYRIKSADLSNLQLTDAELGSKIERYS---E-------KPICDGISID 256 (343)
T ss_dssp EEEEEECTTSCEEEEEESSC----------SEEEEEEHHHHTCTTCCHHHHHTTCEEEE---E-------CCSCSCEEEC
T ss_pred cceeEeccCCCEEEEEeCCC----------CeEEEEEHHHhcCCCCChhhhhcceEecc---c-------CCCCceEEEC
Confidence 35688999999888776542 47888875310000000000 00000000 0 0023467889
Q ss_pred cCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCC--CeeeEEEeecCCEEEEEEe
Q 003363 453 SDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES--NFSWSLLTLDGDNIIAVSS 507 (826)
Q Consensus 453 ~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~--~~~~~~~s~dg~~l~~~~s 507 (826)
+||+ ||++. .....|+++|..+|+...+..... ......+++++ .++++.+
T Consensus 257 ~~G~-l~va~--~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g-~l~v~~~ 309 (343)
T 2qe8_A 257 KDHN-IYVGD--LAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDG-YLYFDCN 309 (343)
T ss_dssp TTCC-EEEEE--GGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTS-CEEEEEC
T ss_pred CCCC-EEEEc--cCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCC-cEEEEeC
Confidence 9986 66653 234468888985677766654321 12334555554 4555544
No 458
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.02 E-value=0.00095 Score=71.03 Aligned_cols=161 Identities=9% Similarity=0.074 Sum_probs=105.6
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecC-CCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~-~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
.....++|.|.++.|+++... ...++.+. +++..+.+.... ... .++++.+.+..|+++-.
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~---~~~I~r~~~~g~~~~~~~~~~~~~p----------~glavd~~~g~ly~~d~---- 135 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVT---LDRILRANLNGSNVEEVVSTGLESP----------GGLAVDWVHDKLYWTDS---- 135 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TTEEEEEETTSCSCEEEECSSCSCC----------CEEEEETTTTEEEEEET----
T ss_pred CceEEEEEeccccEEEEEecc---CCceEEEecCCCCceEEEeCCCCCc----------cEEEEecCCCeEEEEcC----
Confidence 346788999999888776432 23577777 444444443321 122 57889888888877522
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (826)
....|+++++++...+.+. ...-.....+++.|++..
T Consensus 136 ---------------------------------------~~~~I~~~~~dG~~~~~l~-~~~l~~P~~iavdp~~g~--- 172 (349)
T 3v64_C 136 ---------------------------------------GTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGT--- 172 (349)
T ss_dssp ---------------------------------------TTTEEEEEETTSCSCEEEE-CTTCSCEEEEEEETTTTE---
T ss_pred ---------------------------------------CCCeEEEEcCCCCceEEEE-eCCCCCcceEEEecCcCe---
Confidence 2357999999877665552 122235678899998887
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCC-CCccccCceecCCCCEEEEEe
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLS 390 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~l~f~s 390 (826)
|+++.+.. ...|+++++ ++...+.+.. ........+|+|++++|+|..
T Consensus 173 -ly~td~~~-------------~~~I~r~~~-----------------dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 173 -IYWTDWGN-------------TPRIEASSM-----------------DGSGRRIIADTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp -EEEEECSS-------------SCEEEEEET-----------------TSCSCEESCCSSCSCEEEEEEETTTTEEEEEE
T ss_pred -EEEeccCC-------------CCEEEEEeC-----------------CCCCcEEEEECCCCCcceEEEeCCCCEEEEEE
Confidence 87775322 237999997 5544444433 334466789999999998886
Q ss_pred ccCCCCCCCCcccceEEEEeCCCCC
Q 003363 391 AKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 391 ~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
.. ...|+++|+++..
T Consensus 222 ~~----------~~~I~~~~~dG~~ 236 (349)
T 3v64_C 222 AK----------HHVIERANLDGSH 236 (349)
T ss_dssp TT----------TTEEEEEETTSCS
T ss_pred CC----------CCEEEEEeCCCCc
Confidence 54 2579999987643
No 459
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.02 E-value=0.00046 Score=74.64 Aligned_cols=160 Identities=9% Similarity=0.078 Sum_probs=104.4
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEec-CCceeEEEecC-CCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~-~~~~~~~~~~~-~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
.....++|.|.++.|+++... ...++.+.. ++..+.+.... ... .++++.+.+..|+++-.
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~---~~~I~r~~~~g~~~~~~~~~~~~~p----------~glavd~~~g~lY~~d~---- 178 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVT---LDRILRANLNGSNVEEVVSTGLESP----------GGLAVDWVHDKLYWTDS---- 178 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TTEEEEEETTSCCEEEEECSSCSCC----------CCEEEETTTTEEEEEET----
T ss_pred CccEEEEEecCCCeEEEEeCC---CCcEEEEecCCCCcEEEEeCCCCCc----------cEEEEEeCCCeEEEEcC----
Confidence 357788999999888776432 235777773 43333433221 122 57889988888877522
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCc
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLH 310 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~ 310 (826)
....|+++++++...+.+ .... .....++..|++..
T Consensus 179 ---------------------------------------~~~~I~~~~~dg~~~~~l--~~~~l~~P~giavdp~~g~-- 215 (386)
T 3v65_B 179 ---------------------------------------GTSRIEVANLDGAHRKVL--LWQSLEKPRAIALHPMEGT-- 215 (386)
T ss_dssp ---------------------------------------TTTEEEECBTTSCSCEEE--ECSSCSCEEEEEEETTTTE--
T ss_pred ---------------------------------------CCCeEEEEeCCCCceEEe--ecCCCCCCcEEEEEcCCCe--
Confidence 225788888887765555 2322 35678899998887
Q ss_pred cEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecC-CCCccccCceecCCCCEEEEE
Q 003363 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFL 389 (826)
Q Consensus 311 ~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~l~f~ 389 (826)
|+++.+.. ...|+++++ ++...+.+. .........+|+|++++|+|.
T Consensus 216 --ly~td~~~-------------~~~I~r~~~-----------------dG~~~~~~~~~~~~~PnGlavd~~~~~lY~a 263 (386)
T 3v65_B 216 --IYWTDWGN-------------TPRIEASSM-----------------DGSGRRIIADTHLFWPNGLTIDYAGRRMYWV 263 (386)
T ss_dssp --EEEEECSS-------------SCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEEGGGTEEEEE
T ss_pred --EEEeccCC-------------CCEEEEEeC-----------------CCCCcEEEEECCCCCeeeEEEeCCCCEEEEE
Confidence 77765322 137999997 444444443 333446678999999999888
Q ss_pred eccCCCCCCCCcccceEEEEeCCCCC
Q 003363 390 SAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 390 s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
... ...|+++|+++..
T Consensus 264 D~~----------~~~I~~~d~dG~~ 279 (386)
T 3v65_B 264 DAK----------HHVIERANLDGSH 279 (386)
T ss_dssp ETT----------TTEEEEECTTSCS
T ss_pred ECC----------CCEEEEEeCCCCe
Confidence 654 2579999987643
No 460
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.01 E-value=5.1e-05 Score=84.57 Aligned_cols=103 Identities=12% Similarity=0.129 Sum_probs=58.0
Q ss_pred ceEEEEEccC--Cce-EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchh
Q 003363 273 PSLFVININS--GEV-QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEA 349 (826)
Q Consensus 273 ~~l~v~d~~~--g~~-~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 349 (826)
+.+-|+|..+ +++ ... ++.......+.+||||++ ++... . ....+..+|+.....
T Consensus 254 ~~V~VID~~~~~~~~~~~~--Ipvg~~PhGv~~sPDGk~----v~V~~-~-------------~s~~VsVid~~~~~~-- 311 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRY--IPIANNPHGCNMAPDKKH----LCVAG-K-------------LSPTVTVLDVTRFDA-- 311 (595)
T ss_dssp TTEEEEECSGGGCCSSEEE--EEEESSCCCEEECTTSSE----EEEEC-T-------------TSSBEEEEEGGGHHH--
T ss_pred CcEEEEeCcccCCceeEEE--EecCCCceEEEEcCCCCE----EEEeC-C-------------CCCeEEEEECccccc--
Confidence 4588999987 443 222 233345667899999996 55443 2 233789999831100
Q ss_pred hhhhhhcCCCCCC--cceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCC
Q 003363 350 SELELKESSSEDL--PVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPT 413 (826)
Q Consensus 350 ~~~~~~~~~~~~~--~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~ 413 (826)
. . ..+.+.. ...++.-+ ......+|+||| + +|++..- .+++.+||+++
T Consensus 312 --~-~-~~~l~~~~~v~~~v~vG-~gP~h~aF~~dG-~-aY~t~~l---------dsqV~kwdi~~ 361 (595)
T 1fwx_A 312 --V-F-YENADPRSAVVAEPELG-LGPLHTAFDGRG-N-AYTSLFL---------DSQVVKWNIED 361 (595)
T ss_dssp --H-H-HSCCCGGGGEEECCBCC-SCEEEEEECTTS-E-EEEEETT---------TTEEEEEEHHH
T ss_pred --c-c-ccccCcccceEEEcCCC-CCcceEEECCCC-e-EEEEEec---------CCcEEEEEhhH
Confidence 0 0 0001111 11222222 235667899999 4 6777653 26788888766
No 461
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.01 E-value=6.3e-05 Score=82.98 Aligned_cols=184 Identities=11% Similarity=0.098 Sum_probs=104.7
Q ss_pred EeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCCcc
Q 003363 160 VPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFS 237 (826)
Q Consensus 160 ~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~ 237 (826)
.+++||++|+.....+ .+.+|+ .++...... +..+.| ..++| |++.|+..+.++... .|+
T Consensus 138 ~~~~d~~~l~~g~~dg-----~i~iwd~~~~~~~~~~~---~h~~~v------~~l~~--~~~~l~sg~~dg~i~--vwd 199 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDN-----TIKIWDKNTLECKRILT---GHTGSV------LCLQY--DERVIITGSSDSTVR--VWD 199 (435)
T ss_dssp EEECCSSEEEEEESSS-----CEEEEESSSCCEEEEEC---CCSSCE------EEEEC--CSSEEEEEETTSCEE--EEE
T ss_pred EEEECCCEEEEEeCCC-----eEEEEeCCCCeEEEEEc---CCCCcE------EEEEE--CCCEEEEEcCCCeEE--EEE
Confidence 4556999998876543 456663 333333332 222222 56666 888888887776543 233
Q ss_pred CCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceE----eccCCCCCCccceEEEeeCCCCCccEE
Q 003363 238 LGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQ----AVKGIPKSLSVGQVVWAPLNEGLHQYL 313 (826)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~----~l~~~~~~~~~~~~~wSPDg~~~~~~l 313 (826)
............+........|.+ +..+++.....|.+||+.+++.. .+ ......+..+.| |++. |
T Consensus 200 ~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~--~~~~~~v~~~~~--~~~~----l 269 (435)
T 1p22_A 200 VNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVL--VGHRAAVNVVDF--DDKY----I 269 (435)
T ss_dssp SSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEE--CCCSSCEEEEEE--ETTE----E
T ss_pred CCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEe--cCCCCcEEEEEe--CCCE----E
Confidence 222221112222333333334432 24455556789999999887643 23 233345556666 7776 6
Q ss_pred EEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEecc
Q 003363 314 VFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAK 392 (826)
Q Consensus 314 vf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~ 392 (826)
+..+ .+..|.++|+ .+++ ...+..+...+....| +|+.|+..+.+
T Consensus 270 ~s~~---------------~dg~i~vwd~-----------------~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~d 315 (435)
T 1p22_A 270 VSAS---------------GDRTIKVWNT-----------------STCEFVRTLNGHKRGIACLQY--RDRLVVSGSSD 315 (435)
T ss_dssp EEEE---------------TTSEEEEEET-----------------TTCCEEEEEECCSSCEEEEEE--ETTEEEEEETT
T ss_pred EEEe---------------CCCeEEEEEC-----------------CcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCC
Confidence 6655 3347889998 4443 4455555555655666 57777766544
Q ss_pred CCCCCCCCcccceEEEEeCCCCCC
Q 003363 393 SSVDSGAHSATDSLHRIDWPTNGN 416 (826)
Q Consensus 393 ~~~~~g~~~~~~~l~~~d~~~~~~ 416 (826)
..|.+||+.++..
T Consensus 316 -----------g~i~iwd~~~~~~ 328 (435)
T 1p22_A 316 -----------NTIRLWDIECGAC 328 (435)
T ss_dssp -----------SCEEEEETTTCCE
T ss_pred -----------CeEEEEECCCCCE
Confidence 3589999887653
No 462
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.93 E-value=0.0051 Score=62.93 Aligned_cols=175 Identities=6% Similarity=-0.038 Sum_probs=93.8
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhh
Q 003363 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (826)
..|+++|.++..++.+. ......+..++++|||+ |+++.. ....|+++|.
T Consensus 100 ~~i~~~d~~g~~~~~~~-~~~~~~~~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 149 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFG-ATILQHPRGVTVDNKGR-----IIVVEC--------------KVMRVIIFDQ---------- 149 (286)
T ss_dssp CEEEEECTTSCEEEEEC-TTTCSCEEEEEECTTSC-----EEEEET--------------TTTEEEEECT----------
T ss_pred CEEEEECCCCcEEEEec-CccCCCceEEEEeCCCC-----EEEEEC--------------CCCEEEEEcC----------
Confidence 56888995544444442 22223567889999996 665541 2236888885
Q ss_pred hhhcCCCCCCcceecC--CCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeee
Q 003363 353 ELKESSSEDLPVVNLT--ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (826)
Q Consensus 353 ~~~~~~~~~~~~~~Lt--~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 430 (826)
++.....+. ..........++|||+ |++.... ...|+++|..+.....+
T Consensus 150 -------~g~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----------~~~i~~~~~~g~~~~~~----------- 200 (286)
T 1q7f_A 150 -------NGNVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNR----------AHCVKVFNYEGQYLRQI----------- 200 (286)
T ss_dssp -------TSCEEEEEECTTTCSSEEEEEECSSSE-EEEEEGG----------GTEEEEEETTCCEEEEE-----------
T ss_pred -------CCCEEEEeCCCCccCCcEEEEECCCCC-EEEEECC----------CCEEEEEcCCCCEEEEE-----------
Confidence 333333332 2223456788999998 4333322 25699998644211110
Q ss_pred eccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCC--CeeeEEEeecCCEEEEEEeC
Q 003363 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES--NFSWSLLTLDGDNIIAVSSS 508 (826)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~--~~~~~~~s~dg~~l~~~~s~ 508 (826)
.. .+.+ ..+..+++++||+ |+++.. .....|.++|.++..+..+..... ......++++|+ +++. +.
T Consensus 201 ~~--~g~~-----~~p~~i~~d~~G~-l~v~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~ 269 (286)
T 1q7f_A 201 GG--EGIT-----NYPIGVGINSNGE-ILIADN-HNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGS-VVLA-SK 269 (286)
T ss_dssp SC--TTTS-----CSEEEEEECTTCC-EEEEEC-SSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTE-EEEE-ET
T ss_pred cc--CCcc-----CCCcEEEECCCCC-EEEEeC-CCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCc-EEEE-CC
Confidence 00 0000 1223567889996 655532 222367777876555555544322 123346677764 5554 32
Q ss_pred CCCCCeEEEEee
Q 003363 509 PVDVPQVKYGYF 520 (826)
Q Consensus 509 ~~~p~~l~~~~~ 520 (826)
+ ..|.+.+.
T Consensus 270 -~--~~v~v~~~ 278 (286)
T 1q7f_A 270 -D--YRLYIYRY 278 (286)
T ss_dssp -T--TEEEEEEC
T ss_pred -C--CeEEEEEc
Confidence 2 45666554
No 463
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.87 E-value=0.0019 Score=66.08 Aligned_cols=139 Identities=17% Similarity=0.190 Sum_probs=73.0
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhh
Q 003363 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (826)
..++.+|.++..+..+. .+....+..+.++|||+. |+..+. ....|+.+|.
T Consensus 56 ~~V~~~d~~G~~~W~~~-~~~~~~~~~~~~~~dG~~----lv~~~~--------------~~~~v~~vd~---------- 106 (276)
T 3no2_A 56 KGAKMITRDGRELWNIA-APAGCEMQTARILPDGNA----LVAWCG--------------HPSTILEVNM---------- 106 (276)
T ss_dssp SEEEEECTTSCEEEEEE-CCTTCEEEEEEECTTSCE----EEEEES--------------TTEEEEEECT----------
T ss_pred CCEEEECCCCCEEEEEc-CCCCccccccEECCCCCE----EEEecC--------------CCCEEEEEeC----------
Confidence 35788888433333442 222335567889999995 544331 0224555654
Q ss_pred hhhcCCCCCCcceecCC------CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeee
Q 003363 353 ELKESSSEDLPVVNLTE------SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 426 (826)
Q Consensus 353 ~~~~~~~~~~~~~~Lt~------~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 426 (826)
++.....+.- .........+++||+.|+.... ...|+.+|.. |+....
T Consensus 107 -------~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-----------~~~v~~~d~~-G~~~w~------- 160 (276)
T 3no2_A 107 -------KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-----------TSEVREIAPN-GQLLNS------- 160 (276)
T ss_dssp -------TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-----------TTEEEEECTT-SCEEEE-------
T ss_pred -------CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-----------CCEEEEECCC-CCEEEE-------
Confidence 2222222210 0112334568899998764332 2568899876 443110
Q ss_pred eeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEE
Q 003363 427 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLR 482 (826)
Q Consensus 427 ~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~ 482 (826)
+..+ . .....+..++|+.++.. . ....|+.+|.++|++..
T Consensus 161 ---~~~~--~--------~~~~~~~~~~g~~~v~~-~--~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 161 ---VKLS--G--------TPFSSAFLDNGDCLVAC-G--DAHCFVQLNLESNRIVR 200 (276)
T ss_dssp ---EECS--S--------CCCEEEECTTSCEEEEC-B--TTSEEEEECTTTCCEEE
T ss_pred ---EECC--C--------CccceeEcCCCCEEEEe-C--CCCeEEEEeCcCCcEEE
Confidence 0000 0 11234567888855433 2 23369999999787653
No 464
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.86 E-value=0.0012 Score=69.03 Aligned_cols=179 Identities=11% Similarity=0.015 Sum_probs=107.7
Q ss_pred ceEEEEEccCCce--EeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhh
Q 003363 273 PSLFVININSGEV--QAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 350 (826)
Q Consensus 273 ~~l~v~d~~~g~~--~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 350 (826)
..|++++++++.. ..+ ..+-.....+++.+.+.. |+++-. ....|+++++
T Consensus 57 ~~I~r~~~~g~~~~~~~~--~~~l~~p~glavd~~~g~----ly~~d~--------------~~~~I~~~~~-------- 108 (318)
T 3sov_A 57 EAIKRTEFNKTESVQNVV--VSGLLSPDGLACDWLGEK----LYWTDS--------------ETNRIEVSNL-------- 108 (318)
T ss_dssp TEEEEEETTSSSCCCEEE--EECCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET--------
T ss_pred CcEEEEEccCCCceEEEE--cCCCCCccEEEEEcCCCe----EEEEEC--------------CCCEEEEEEC--------
Confidence 6789999887642 222 112224567888887776 777642 2237889987
Q ss_pred hhhhhcCCCCCCcceecC-CCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeee
Q 003363 351 ELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPV 429 (826)
Q Consensus 351 ~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 429 (826)
++...+.+. .........++.|++.+|+|..... ...|+++++++...+.+...
T Consensus 109 ---------dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~---------~~~I~r~~~dG~~~~~~~~~------- 163 (318)
T 3sov_A 109 ---------DGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGE---------VPKIERAGMDGSSRFIIINS------- 163 (318)
T ss_dssp ---------TSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSS---------SCEEEEEETTSCSCEEEECS-------
T ss_pred ---------CCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCC---------CCEEEEEEcCCCCeEEEEEC-------
Confidence 554444443 3334456778889888887775321 35799999876443221100
Q ss_pred eeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCC
Q 003363 430 VQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSP 509 (826)
Q Consensus 430 ~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~ 509 (826)
.+ .....++|+++++.||++- .....|+++|++++..+.+...... .-..++.+++.+|++-.
T Consensus 164 -------~l-----~~Pnglavd~~~~~lY~aD--~~~~~I~~~d~dG~~~~~~~~~~~~-~P~glav~~~~lywtd~-- 226 (318)
T 3sov_A 164 -------EI-----YWPNGLTLDYEEQKLYWAD--AKLNFIHKSNLDGTNRQAVVKGSLP-HPFALTLFEDILYWTDW-- 226 (318)
T ss_dssp -------SC-----SCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEECSCCS-CEEEEEEETTEEEEEET--
T ss_pred -------CC-----CCccEEEEeccCCEEEEEE--CCCCEEEEEcCCCCceEEEecCCCC-CceEEEEeCCEEEEEec--
Confidence 00 0124678999888898873 3456899999987776666542221 11245556777777633
Q ss_pred CCCCeEEEEeecc
Q 003363 510 VDVPQVKYGYFVD 522 (826)
Q Consensus 510 ~~p~~l~~~~~~~ 522 (826)
....|+.++..+
T Consensus 227 -~~~~V~~~~~~~ 238 (318)
T 3sov_A 227 -STHSILACNKYT 238 (318)
T ss_dssp -TTTEEEEEETTT
T ss_pred -CCCeEEEEECCC
Confidence 234577776533
No 465
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.86 E-value=0.0024 Score=66.84 Aligned_cols=161 Identities=11% Similarity=0.100 Sum_probs=101.4
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-----ceeEEEecC-CCccccccCCCcccceeecCCCCeEEEEee
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAE 227 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~-----~~~~~~~~~-~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~ 227 (826)
.....+.|++++++|+++... ...++.+...+ ....++... ... .++++.+.+..|+++-.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~---~~~I~~~~~~g~~~~~~~~~~~~~~~~~p----------~glavd~~~~~ly~~d~ 96 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLS---QRMICSTQLDRAHGVSSYDTVISRDIQAP----------DGLAVDWIHSNIYWTDS 96 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETT---TTEEEEEEC--------CEEEECSSCSCC----------CEEEEETTTTEEEEEET
T ss_pred CceEEEEEEeCCCEEEEEECC---CCcEEEEECCCCCCCcccEEEEeCCCCCc----------CEEEEeecCCeEEEEEC
Confidence 356789999999998776542 33577776332 222232211 122 57888888887776522
Q ss_pred cCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCC
Q 003363 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNE 307 (826)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~ 307 (826)
....|.++++++...+.+. .........++..|++.
T Consensus 97 -------------------------------------------~~~~I~~~~~~g~~~~~~~-~~~~~~P~~iavdp~~g 132 (316)
T 1ijq_A 97 -------------------------------------------VLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHG 132 (316)
T ss_dssp -------------------------------------------TTTEEEEEETTSSSEEEEE-ECTTCCEEEEEEETTTT
T ss_pred -------------------------------------------CCCEEEEEeCCCCceEEEE-ECCCCCcceEEeCCCCC
Confidence 2357899999877666552 11223566888999888
Q ss_pred CCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecC-CCCccccCceecCCCCEE
Q 003363 308 GLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFL 386 (826)
Q Consensus 308 ~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~l 386 (826)
. |+++.+. ....|+++++ ++...+.+. .........+|+|++++|
T Consensus 133 ~----ly~~d~~-------------~~~~I~~~~~-----------------dG~~~~~~~~~~~~~P~gla~d~~~~~l 178 (316)
T 1ijq_A 133 F----MYWTDWG-------------TPAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGRL 178 (316)
T ss_dssp E----EEEEECS-------------SSCEEEEEET-----------------TSCCEEEEECSSCSCEEEEEEETTTTEE
T ss_pred E----EEEEccC-------------CCCeEEEEcC-----------------CCCCeEEEEECCCCCceEEEEeccCCEE
Confidence 7 7776532 1137999997 444444342 233445678899999999
Q ss_pred EEEeccCCCCCCCCcccceEEEEeCCCCC
Q 003363 387 VFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 387 ~f~s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
+|.... ...|+++|+++..
T Consensus 179 Y~~D~~----------~~~I~~~d~dg~~ 197 (316)
T 1ijq_A 179 YWVDSK----------LHSISSIDVNGGN 197 (316)
T ss_dssp EEEETT----------TTEEEEEETTSCS
T ss_pred EEEECC----------CCeEEEEecCCCc
Confidence 888754 2579999987633
No 466
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.85 E-value=0.0012 Score=66.97 Aligned_cols=173 Identities=5% Similarity=-0.036 Sum_probs=92.2
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhh
Q 003363 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (826)
..|+++|..++....+. ......+..++++|||+ |++... ...|+++|.
T Consensus 46 ~~i~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~-----l~v~~~---------------~~~i~~~d~---------- 94 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLP-FNGLYQPQGLAVDGAGT-----VYVTDF---------------NNRVVTLAA---------- 94 (270)
T ss_dssp CEEEEECC-----EECC-CCSCCSCCCEEECTTCC-----EEEEET---------------TTEEEEECT----------
T ss_pred CcEEEecCCCcccceEe-eCCcCCcceeEECCCCC-----EEEEcC---------------CCEEEEEeC----------
Confidence 57888887776655442 12223566789999987 655541 236888886
Q ss_pred hhhcCCCCCCcceecCCC-CccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeee
Q 003363 353 ELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 431 (826)
Q Consensus 353 ~~~~~~~~~~~~~~Lt~~-~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 431 (826)
+++....+... ........++|||+ |++.... ...|++++..+........
T Consensus 95 -------~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~----------~~~i~~~~~~~~~~~~~~~---------- 146 (270)
T 1rwi_B 95 -------GSNNQTVLPFDGLNYPEGLAVDTQGA-VYVADRG----------NNRVVKLAAGSKTQTVLPF---------- 146 (270)
T ss_dssp -------TCSCCEECCCCSCSSEEEEEECTTCC-EEEEEGG----------GTEEEEECTTCCSCEECCC----------
T ss_pred -------CCceEeeeecCCcCCCcceEECCCCC-EEEEECC----------CCEEEEEECCCceeEeecc----------
Confidence 44444433322 23456778999997 4433322 2468888643322110000
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC-CCeeeEEEeecCCEEEEEEeCCC
Q 003363 432 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-SNFSWSLLTLDGDNIIAVSSSPV 510 (826)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~-~~~~~~~~s~dg~~l~~~~s~~~ 510 (826)
..+ ..+..+++++||+ ||++.. +...|+++|.+++......... .......++++| .+++.....
T Consensus 147 ----~~~-----~~p~~i~~~~~g~-l~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~- 212 (270)
T 1rwi_B 147 ----TGL-----NDPDGVAVDNSGN-VYVTDT--DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNT- 212 (270)
T ss_dssp ----CSC-----CSCCCEEECTTCC-EEEEEG--GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTT-
T ss_pred ----ccC-----CCceeEEEeCCCC-EEEEEC--CCCEEEEEecCCCceEeecccCCCCceEEEECCCC-CEEEEECCC-
Confidence 000 1234677889997 666532 3346888898877766543332 223334455555 444444322
Q ss_pred CCCeEEEEee
Q 003363 511 DVPQVKYGYF 520 (826)
Q Consensus 511 ~p~~l~~~~~ 520 (826)
..|++++.
T Consensus 213 --~~v~~~~~ 220 (270)
T 1rwi_B 213 --NQVVKLLA 220 (270)
T ss_dssp --SCEEEECT
T ss_pred --CcEEEEcC
Confidence 23666654
No 467
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.84 E-value=0.0015 Score=70.80 Aligned_cols=161 Identities=11% Similarity=0.115 Sum_probs=102.7
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-----ceeEEEec-CCCccccccCCCcccceeecCCCCeEEEEee
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAE 227 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~-----~~~~~~~~-~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~ 227 (826)
......+|++.+++|+++... ...++.+...+ ....+... .... .++++.+.++.|+++-.
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~---~~~I~~~~~~g~~~~~~~~~~~~~~~~~p----------~glavD~~~~~lY~~d~ 178 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLS---QRMICSTQLDRAHGVSSYDTVISRDIQAP----------DGLAVDWIHSNIYWTDS 178 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TTEEEEEEC------CCCEEEECSSCSCE----------EEEEEETTTTEEEEEET
T ss_pred CcceEEeeeeccCceEEEecC---CCeEEEEEcccCCCCCcceEEEeCCCCCc----------ccEEEEecCCceEEEEC
Confidence 457788999999888776432 23466666322 22333321 1122 57788887777776521
Q ss_pred cCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCC-CccceEEEeeCC
Q 003363 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLN 306 (826)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg 306 (826)
....|.+++++++..+.+ .... ..+..++..|.+
T Consensus 179 -------------------------------------------~~~~I~~~~~~g~~~~~l--~~~~~~~P~~iavdp~~ 213 (400)
T 3p5b_L 179 -------------------------------------------VLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVH 213 (400)
T ss_dssp -------------------------------------------TTTEEEEECTTTCSEEEE--EECSSCCEEEEEEETTT
T ss_pred -------------------------------------------CCCeEEEEeCCCCceEEE--EeCCCCCcceEEEeccc
Confidence 235789999988776666 3322 346778999988
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecC-CCCccccCceecCCCCE
Q 003363 307 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKF 385 (826)
Q Consensus 307 ~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~ 385 (826)
.. |+++.+.. ...|+++++ ++...+.+. .........+++|++++
T Consensus 214 g~----ly~td~~~-------------~~~I~~~~~-----------------dG~~~~~~~~~~l~~P~glavd~~~~~ 259 (400)
T 3p5b_L 214 GF----MYWTDWGT-------------PAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGR 259 (400)
T ss_dssp TE----EEEEECSS-------------SCCEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred Ce----EEEEeCCC-------------CCEEEEEeC-----------------CCCccEEEEECCCCceEEEEEEeCCCE
Confidence 76 77765321 237999998 554444443 33345677899999999
Q ss_pred EEEEeccCCCCCCCCcccceEEEEeCCCCCC
Q 003363 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (826)
Q Consensus 386 l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~ 416 (826)
|+|.... ...|+++|+++...
T Consensus 260 lY~aD~~----------~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 260 LYWVDSK----------LHSISSIDVNGGNR 280 (400)
T ss_dssp EEEEETT----------TTEEEEEETTSCCC
T ss_pred EEEEECC----------CCEEEEEeCCCCcc
Confidence 9888644 26799999876443
No 468
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.80 E-value=0.0008 Score=67.08 Aligned_cols=178 Identities=13% Similarity=0.179 Sum_probs=104.0
Q ss_pred CceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhh
Q 003363 272 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (826)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (826)
...|.++|+++|++..-...+. .......+++|+. |+...|. ...++++|.
T Consensus 64 ~S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~g~~----ly~ltw~--------------~~~v~v~D~--------- 114 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQIELGK--RYFGEGISDWKDK----IVGLTWK--------------NGLGFVWNI--------- 114 (262)
T ss_dssp EEEEEEECTTTCCEEEEEECCT--TCCEEEEEEETTE----EEEEESS--------------SSEEEEEET---------
T ss_pred CceEEEEECCCCcEEEEEecCC--ccceeEEEEeCCE----EEEEEee--------------CCEEEEEEC---------
Confidence 3689999999998765411222 2223346677887 8776643 337999998
Q ss_pred hhhhcCCCCCCcc-eecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeee
Q 003363 352 LELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (826)
Q Consensus 352 ~~~~~~~~~~~~~-~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 430 (826)
++.+. .++.... ....+++||++|+ .++. ...|+.+|..+.+... -+++.
T Consensus 115 --------~t~~~~~ti~~~~---eG~glt~dg~~L~-~SdG----------s~~i~~iDp~T~~v~~-------~I~V~ 165 (262)
T 3nol_A 115 --------RNLRQVRSFNYDG---EGWGLTHNDQYLI-MSDG----------TPVLRFLDPESLTPVR-------TITVT 165 (262)
T ss_dssp --------TTCCEEEEEECSS---CCCCEEECSSCEE-ECCS----------SSEEEEECTTTCSEEE-------EEECE
T ss_pred --------ccCcEEEEEECCC---CceEEecCCCEEE-EECC----------CCeEEEEcCCCCeEEE-------EEEec
Confidence 55443 3443321 3346678998764 4432 2679999988755421 11111
Q ss_pred eccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC-------------CCeeeEEEee
Q 003363 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE-------------SNFSWSLLTL 497 (826)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~-------------~~~~~~~~s~ 497 (826)
. ....+ ..++.+.|. || .||+ ..+. ...|.+||+++|++.....-. ......++++
T Consensus 166 ~--~g~~~-----~~lNELe~~-~G-~lya-n~w~-~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp 234 (262)
T 3nol_A 166 A--HGEEL-----PELNELEWV-DG-EIFA-NVWQ-TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDK 234 (262)
T ss_dssp E--TTEEC-----CCEEEEEEE-TT-EEEE-EETT-SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEET
T ss_pred c--CCccc-----cccceeEEE-CC-EEEE-EEcc-CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcC
Confidence 0 00001 012235676 77 4664 3444 347999999999987543321 1224457888
Q ss_pred cCCEEEEEEeCCCCCCeEEEEeec
Q 003363 498 DGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 498 dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
+++.++.+..... .+|-+.+.
T Consensus 235 ~~~~lfVTGK~Wp---~~~ev~~~ 255 (262)
T 3nol_A 235 EHHRLFVTGKLWP---KVFEITLT 255 (262)
T ss_dssp TTTEEEEEETTCS---EEEEEEEE
T ss_pred CCCEEEEECCCCC---ceEEEEEe
Confidence 8888888887663 46665553
No 469
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.79 E-value=0.002 Score=67.54 Aligned_cols=194 Identities=11% Similarity=-0.035 Sum_probs=99.6
Q ss_pred eEEEEEccCCceEeccCCCC---CCccceEEEee-CCCCCccEEEEEeecCcceeeee---eeeccCCCceEEEEccccc
Q 003363 274 SLFVININSGEVQAVKGIPK---SLSVGQVVWAP-LNEGLHQYLVFVGWSSETRKLGI---KYCYNRPCALYAVRVSLYK 346 (826)
Q Consensus 274 ~l~v~d~~~g~~~~l~~~~~---~~~~~~~~wSP-Dg~~~~~~lvf~~~~~~~~~~g~---~~~~~~~~~l~~~d~~~~~ 346 (826)
.|+++|.++++++.+..... ......+++.| ||+ |+++.....-..... .........|+++|.
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~-----l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~---- 172 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGI-----VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP---- 172 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCC-----EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET----
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCE-----EEEECCcccccccccceehcccCCCceEEEEeC----
Confidence 37788877776655421111 12345788999 885 777642210000000 000012246999997
Q ss_pred chhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeee
Q 003363 347 SEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 426 (826)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 426 (826)
.+++.+.+...........|+|||+.|++.... ...|+++++.+.... ....+
T Consensus 173 -------------~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~----------~~~I~~~~~~~~~~~----~~~~~ 225 (322)
T 2fp8_A 173 -------------STKETTLLLKELHVPGGAEVSADSSFVLVAEFL----------SHQIVKYWLEGPKKG----TAEVL 225 (322)
T ss_dssp -------------TTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG----------GTEEEEEESSSTTTT----CEEEE
T ss_pred -------------CCCEEEEeccCCccCcceEECCCCCEEEEEeCC----------CCeEEEEECCCCcCC----ccceE
Confidence 555554443332334567899999987666543 257999998753211 10001
Q ss_pred eeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEe--------CCeEEEEEEECCCCcEEEecCCCCC-ee-eEEEe
Q 003363 427 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIW--------GSSQVIISVNVSSGELLRITPAESN-FS-WSLLT 496 (826)
Q Consensus 427 ~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~--------~~~~~l~~vdl~tg~~~~lt~~~~~-~~-~~~~s 496 (826)
.. . +| ...++..+||+ |+++... .....|+++|.++..+..+....+. .. ...+.
T Consensus 226 ~~---~------~g-----P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~ 290 (322)
T 2fp8_A 226 VK---I------PN-----PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQ 290 (322)
T ss_dssp EE---C------SS-----EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEE
T ss_pred Ee---C------CC-----CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEE
Confidence 11 0 00 12457788997 6666543 2246789999865444555443321 11 11222
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEeec
Q 003363 497 LDGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 497 ~dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
.+++.|++.... ...|.++++.
T Consensus 291 ~~~g~L~v~~~~---~~~i~~~~~~ 312 (322)
T 2fp8_A 291 EHDGLLYIGTLF---HGSVGILVYD 312 (322)
T ss_dssp EETTEEEEECSS---CSEEEEEEC-
T ss_pred EeCCEEEEeecC---CCceEEEecc
Confidence 345666655432 2346666654
No 470
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.78 E-value=0.019 Score=58.65 Aligned_cols=140 Identities=9% Similarity=-0.035 Sum_probs=77.8
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhh
Q 003363 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (826)
..|+++|. +++...+........+..+++.|||+ |++... ....|+++|.
T Consensus 120 ~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 169 (299)
T 2z2n_A 120 NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-----LWFTEN--------------QNNAIGRITE---------- 169 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-----EEEEET--------------TTTEEEEECT----------
T ss_pred ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-----EEEEeC--------------CCCEEEEEcC----------
Confidence 56888888 66655442111223466788999985 766542 1236888875
Q ss_pred hhhcCCCCCCccee--cCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeee
Q 003363 353 ELKESSSEDLPVVN--LTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (826)
Q Consensus 353 ~~~~~~~~~~~~~~--Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 430 (826)
+++... +...........+++||+ | |.+... ...|+++|. ++.....
T Consensus 170 --------~g~~~~~~~~~~~~~~~~i~~~~~g~-l-~v~~~~---------~~~i~~~~~-~g~~~~~----------- 218 (299)
T 2z2n_A 170 --------SGDITEFKIPTPASGPVGITKGNDDA-L-WFVEII---------GNKIGRITT-SGEITEF----------- 218 (299)
T ss_dssp --------TCCEEEEECSSTTCCEEEEEECTTSS-E-EEEETT---------TTEEEEECT-TCCEEEE-----------
T ss_pred --------CCcEEEeeCCCCCCcceeEEECCCCC-E-EEEccC---------CceEEEECC-CCcEEEE-----------
Confidence 223322 222233455678899988 4 444321 246899987 4332111
Q ss_pred eccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEec
Q 003363 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRIT 484 (826)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt 484 (826)
..+.. . ..+..+.+++||+ |+++. .+...|+.+|. +++++.+.
T Consensus 219 ~~~~~--~-----~~~~~i~~~~~g~-l~v~~--~~~~~i~~~d~-~g~~~~~~ 261 (299)
T 2z2n_A 219 KIPTP--N-----ARPHAITAGAGID-LWFTE--WGANKIGRLTS-NNIIEEYP 261 (299)
T ss_dssp ECSST--T-----CCEEEEEECSTTC-EEEEE--TTTTEEEEEET-TTEEEEEE
T ss_pred ECCCC--C-----CCceeEEECCCCC-EEEec--cCCceEEEECC-CCceEEEe
Confidence 00000 0 1223566788987 66653 23456888898 56766664
No 471
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.76 E-value=0.00064 Score=74.80 Aligned_cols=211 Identities=10% Similarity=0.015 Sum_probs=112.6
Q ss_pred ceeEEEEEEeecCCCCccceeecCCcceecccEEEEeCCCCCeEEEEecCCCCCCeEEEEec--CCceeEEEecCCCccc
Q 003363 125 RKKFMLSTVISKENENSVTFQWAPFPVEMTGASAVVPSPSGSKLLVVRNPENESPIQFELWS--QSQLEKEFHVPQTVHG 202 (826)
Q Consensus 125 ~~~~l~~~~i~~~~~~~~~lt~~~~~~~~~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~g 202 (826)
....+.++++.+. .....+.... ..+...+| ||+.|+....++ .+.+|+ .++...... ...+
T Consensus 151 ~dg~i~iwd~~~~-~~~~~~~~h~-----~~v~~l~~--~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~---~h~~ 214 (435)
T 1p22_A 151 RDNTIKIWDKNTL-ECKRILTGHT-----GSVLCLQY--DERVIITGSSDS-----TVRVWDVNTGEMLNTLI---HHCE 214 (435)
T ss_dssp SSSCEEEEESSSC-CEEEEECCCS-----SCEEEEEC--CSSEEEEEETTS-----CEEEEESSSCCEEEEEC---CCCS
T ss_pred CCCeEEEEeCCCC-eEEEEEcCCC-----CcEEEEEE--CCCEEEEEcCCC-----eEEEEECCCCcEEEEEc---CCCC
Confidence 3445666665322 2222332222 34666666 888888776543 456663 333333322 2222
Q ss_pred cccCCCcccceeecCCCCeEEEEeecCCCCCCCccCCCCCCC---CCCccCCCCCCcceeecCCCccCCCccCceEEEEE
Q 003363 203 SVYADGWFEGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGG---SSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVIN 279 (826)
Q Consensus 203 ~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d 279 (826)
.| ..+.|++ ..|+..+.++... .|+....... .....+........| +....+++..+..|.+||
T Consensus 215 ~v------~~l~~~~--~~l~s~s~dg~i~--vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd 282 (435)
T 1p22_A 215 AV------LHLRFNN--GMMVTCSKDRSIA--VWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWN 282 (435)
T ss_dssp CE------EEEECCT--TEEEEEETTSCEE--EEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred cE------EEEEEcC--CEEEEeeCCCcEE--EEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEE
Confidence 22 6777864 4677776665433 2222111111 111223333333344 222344555678999999
Q ss_pred ccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCC
Q 003363 280 INSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSS 359 (826)
Q Consensus 280 ~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 359 (826)
+.+++..... ......+..+.| +++. |+..+ .+..|..+|+
T Consensus 283 ~~~~~~~~~~-~~~~~~v~~~~~--~~~~----l~~g~---------------~dg~i~iwd~----------------- 323 (435)
T 1p22_A 283 TSTCEFVRTL-NGHKRGIACLQY--RDRL----VVSGS---------------SDNTIRLWDI----------------- 323 (435)
T ss_dssp TTTCCEEEEE-ECCSSCEEEEEE--ETTE----EEEEE---------------TTSCEEEEET-----------------
T ss_pred CCcCcEEEEE-cCCCCcEEEEEe--CCCE----EEEEe---------------CCCeEEEEEC-----------------
Confidence 9988765431 122334455555 5664 55544 3347889998
Q ss_pred CCCc-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCC
Q 003363 360 EDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 360 ~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
.+++ ...+..+...+....| ||++|+..+.+ ..|.+||+.++.
T Consensus 324 ~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~d-----------g~i~vwd~~~~~ 367 (435)
T 1p22_A 324 ECGACLRVLEGHEELVRCIRF--DNKRIVSGAYD-----------GKIKVWDLVAAL 367 (435)
T ss_dssp TTCCEEEEECCCSSCEEEEEC--CSSEEEEEETT-----------SCEEEEEHHHHT
T ss_pred CCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCC-----------CcEEEEECCCCC
Confidence 4444 4556556666666666 88888766644 358889886644
No 472
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.75 E-value=0.00014 Score=85.12 Aligned_cols=179 Identities=9% Similarity=0.001 Sum_probs=103.2
Q ss_pred ceEEEEEccC----CceEeccCCCCC-CccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccc
Q 003363 273 PSLFVININS----GEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKS 347 (826)
Q Consensus 273 ~~l~v~d~~~----g~~~~l~~~~~~-~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 347 (826)
..|+++++++ ...+.+ .... ..+..+++.+.++. |+++- . ....|+++++
T Consensus 428 ~~I~~~~~~g~~~~~~~~~~--i~~~~~~P~glavD~~~g~----LY~tD-~-------------~~~~I~v~d~----- 482 (699)
T 1n7d_A 428 RMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSN----IYWTD-S-------------VLGTVSVADT----- 482 (699)
T ss_dssp TSBEEEESCCCCC-CCCCCB--CCSCC--CCCEECCCSSSB----CEECC-T-------------TTSCEEEEBS-----
T ss_pred CeEEEEecCCCCCCcceEEE--EeCCCCCcceEEEEeeCCc----EEEEe-c-------------cCCeEEEEec-----
Confidence 5688888875 333333 2222 24456778777776 76653 1 2236889987
Q ss_pred hhhhhhhhcCCCCCCcceecCC-CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeee
Q 003363 348 EASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDV 426 (826)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 426 (826)
++...+.+.. ........++.|++.+|+|.... ....|+++++++...+.+...
T Consensus 483 ------------dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~---------~~~~I~~~~~dG~~~~~l~~~---- 537 (699)
T 1n7d_A 483 ------------KGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG---------TPAKIKKGGLNGVDIYSLVTE---- 537 (699)
T ss_dssp ------------SSCCEEEECCCSSCCCCCEECCSSSSCCEECCCS---------SSCCEEBCCSSSCCCCEESCS----
T ss_pred ------------CCCceEEEEeCCCCCcceEEEccCCCcEEEcccC---------CCCeEEEEeCCCCCeeEEEeC----
Confidence 5555554443 23445677899988888766532 125688888766433211100
Q ss_pred eeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCC-eeeEEEeecCCEEEEE
Q 003363 427 IPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESN-FSWSLLTLDGDNIIAV 505 (826)
Q Consensus 427 ~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~-~~~~~~s~dg~~l~~~ 505 (826)
.+ .....++|+++++.||++- .....|++++++++..+.+...... ..-..++.+++.+|++
T Consensus 538 ----------~l-----~~PnGlavd~~~~~LY~aD--~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywt 600 (699)
T 1n7d_A 538 ----------NI-----QWPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWT 600 (699)
T ss_dssp ----------SC-----SSCCCEEECTTTCCEEEEE--TTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEE
T ss_pred ----------CC-----CCccEEEEeccCCEEEEEe--cCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEE
Confidence 00 0234788999988888864 3456789999987666666543211 1112455567777766
Q ss_pred EeCCCCCCeEEEEeec
Q 003363 506 SSSPVDVPQVKYGYFV 521 (826)
Q Consensus 506 ~s~~~~p~~l~~~~~~ 521 (826)
.... .+|.+++..
T Consensus 601 d~~~---~~V~~~d~~ 613 (699)
T 1n7d_A 601 DIIN---EAIFSANRL 613 (699)
T ss_dssp CSTT---TCEEEEETT
T ss_pred eCCC---CeEEEEEcc
Confidence 5332 357777643
No 473
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.74 E-value=0.0045 Score=72.89 Aligned_cols=180 Identities=8% Similarity=-0.031 Sum_probs=106.9
Q ss_pred ceEEEEEccCC----ceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccch
Q 003363 273 PSLFVININSG----EVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 348 (826)
Q Consensus 273 ~~l~v~d~~~g----~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 348 (826)
..|+++++++. ..+.+. ...-..+..+++.+.++. ||++-. ....|+++++
T Consensus 446 ~~I~~~~l~g~~~~~~~~~vi-~~~l~~P~GLAvD~~~~~----LY~tD~--------------~~~~I~v~~l------ 500 (791)
T 3m0c_C 446 RMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSN----IYWTDS--------------VLGTVSVADT------ 500 (791)
T ss_dssp TEEEEEEC--------CEEEE-CSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET------
T ss_pred eeEEEEeccCCCCCcceeEEE-ecCCCCcceeeeeecCCc----EEEEec--------------CCCeEEEEeC------
Confidence 56888888763 333331 112235667889988887 877642 2237999998
Q ss_pred hhhhhhhcCCCCCCcceecCC-CCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeee
Q 003363 349 ASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 427 (826)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 427 (826)
++...+.|.. ........++.|.+.+|+|+.... ...|+++++++...+.+...
T Consensus 501 -----------dG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~---------~~~I~~~~~dG~~~~~lv~~----- 555 (791)
T 3m0c_C 501 -----------KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT---------PAKIKKGGLNGVDIYSLVTE----- 555 (791)
T ss_dssp -----------TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS---------SCEEEEEETTSCCEEEEECS-----
T ss_pred -----------CCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCC---------CCeEEEEecCCCceEEEEeC-----
Confidence 5555555543 334466788999988888876331 25799999876443221110
Q ss_pred eeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCC-eeeEEEeecCCEEEEEE
Q 003363 428 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESN-FSWSLLTLDGDNIIAVS 506 (826)
Q Consensus 428 ~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~-~~~~~~s~dg~~l~~~~ 506 (826)
.+ .....+++.+++..||++- .....|+++++++...+.+...... ..-..++.+++.||++-
T Consensus 556 ---------~l-----~~P~GLavD~~~~~LYwaD--~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD 619 (791)
T 3m0c_C 556 ---------NI-----QWPNGITLDLLSGRLYWVD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 619 (791)
T ss_dssp ---------SC-----SCEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEE
T ss_pred ---------CC-----CCceEEEEecCCCeEEEEe--CCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEE
Confidence 00 0123566777778888863 3445799999988877777544221 12235566777777665
Q ss_pred eCCCCCCeEEEEeec
Q 003363 507 SSPVDVPQVKYGYFV 521 (826)
Q Consensus 507 s~~~~p~~l~~~~~~ 521 (826)
... ..|+.++..
T Consensus 620 ~~~---~~I~~~dk~ 631 (791)
T 3m0c_C 620 IIN---EAIFSANRL 631 (791)
T ss_dssp TTT---TEEEEEETT
T ss_pred CCC---CEEEEEeCC
Confidence 332 446666643
No 474
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.69 E-value=0.0043 Score=71.32 Aligned_cols=162 Identities=10% Similarity=0.045 Sum_probs=108.3
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecC-CCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~-~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
.......|.|++.+|+++... ...++.+. +++..+.+.... ... .+++..+.++.|+++-.
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~---~~~I~r~~~~g~~~~~v~~~g~~~P----------~GlAvD~~~~~LY~tD~---- 99 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDIS---LKTISRAFMNGSALEHVVEFGLDYP----------EGMAVDWLGKNLYWADT---- 99 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TTEEEEEETTSCSCEEEECSSCSCC----------CEEEEETTTTEEEEEET----
T ss_pred CceEEEEEECCCCEEEEEECC---CCeEEEEECCCCCcEEEEeCCCCCc----------ceEEEEeCCCEEEEEEC----
Confidence 346788999999888776432 23577776 444444444322 122 57888888888877521
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCcc
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQ 311 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~ 311 (826)
....|.+++++++..+.+. ...-..+..++..|....
T Consensus 100 ---------------------------------------~~~~I~v~~~dG~~~~~l~-~~~l~~P~~iavdp~~G~--- 136 (628)
T 4a0p_A 100 ---------------------------------------GTNRIEVSKLDGQHRQVLV-WKDLDSPRALALDPAEGF--- 136 (628)
T ss_dssp ---------------------------------------TTTEEEEEETTSTTCEEEE-CSSCCCEEEEEEETTTTE---
T ss_pred ---------------------------------------CCCEEEEEecCCCcEEEEE-eCCCCCcccEEEccCCCe---
Confidence 2368999999887766652 122235678899997766
Q ss_pred EEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEec
Q 003363 312 YLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSA 391 (826)
Q Consensus 312 ~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~ 391 (826)
|+++-|.. ...|+++++ ++...+.+..........++++++++|+|...
T Consensus 137 -lY~tD~g~-------------~~~I~r~~~-----------------dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 137 -MYWTEWGG-------------KPKIDRAAM-----------------DGSERTTLVPNVGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp -EEEEECSS-------------SCEEEEEET-----------------TSCSCEEEECSCSSEEEEEEETTTTEEEEEET
T ss_pred -EEEeCCCC-------------CCEEEEEeC-----------------CCCceEEEECCCCCcceEEEccccCEEEEEEC
Confidence 87765421 237999998 56666666555555677889999999988875
Q ss_pred cCCCCCCCCcccceEEEEeCCCCCC
Q 003363 392 KSSVDSGAHSATDSLHRIDWPTNGN 416 (826)
Q Consensus 392 ~~~~~~g~~~~~~~l~~~d~~~~~~ 416 (826)
.. ..|+++|++++..
T Consensus 186 ~~----------~~I~~~d~dG~~~ 200 (628)
T 4a0p_A 186 DT----------NLIESSNMLGLNR 200 (628)
T ss_dssp TT----------TEEEEEETTSCSC
T ss_pred CC----------CEEEEEcCCCCce
Confidence 43 5799999877443
No 475
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.69 E-value=0.0044 Score=62.03 Aligned_cols=210 Identities=14% Similarity=0.148 Sum_probs=117.7
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
...+..+|.|++++|+.+.+. ...++.++..++..+.+.+... +. .+++++.+||+ ++.+.+.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~---~~~I~~ld~~g~v~~~i~l~g~--~D------~EGIa~~~~g~-~~vs~E~----- 89 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINK---PAAIVEMTTNGDLIRTIPLDFV--KD------LETIEYIGDNQ-FVISDER----- 89 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEET---TEEEEEEETTCCEEEEEECSSC--SS------EEEEEECSTTE-EEEEETT-----
T ss_pred cCcceeEEeCCCCEEEEEECC---CCeEEEEeCCCCEEEEEecCCC--CC------hHHeEEeCCCE-EEEEECC-----
Confidence 457889999999999887764 4579999965777776655321 11 27899998885 4333232
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCc-eE---ecc----CCCCCCccceEEEeeC
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGE-VQ---AVK----GIPKSLSVGQVVWAPL 305 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~-~~---~l~----~~~~~~~~~~~~wSPD 305 (826)
...|+++++.... +. ... ..+.......++|.|+
T Consensus 90 --------------------------------------~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~ 131 (255)
T 3qqz_A 90 --------------------------------------DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQ 131 (255)
T ss_dssp --------------------------------------TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETT
T ss_pred --------------------------------------CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCC
Confidence 2456776654332 11 111 1233445678999999
Q ss_pred CCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceec-------CCCCccccCce
Q 003363 306 NEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL-------TESISSAFFPR 378 (826)
Q Consensus 306 g~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L-------t~~~~~~~~p~ 378 (826)
+++ |+.+. +..+ ..||.++- .. .+...+.+ ...........
T Consensus 132 ~~~----L~va~-E~~p------------~~i~~~~g-~~--------------~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 132 DHT----FWFFK-EKNP------------IEVYKVNG-LL--------------SSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTE----EEEEE-ESSS------------EEEEEEES-TT--------------CSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCE----EEEEE-CcCC------------ceEEEEcc-cc--------------cCCceeeecchhhccccccCCceeEE
Confidence 987 76654 3222 25777761 00 11111111 01122356678
Q ss_pred ecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCC--CcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCC
Q 003363 379 FSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNF--SSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGC 456 (826)
Q Consensus 379 ~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~ 456 (826)
+.|.-..|+.+|... ..|..+|+.+.-.. .+..+...+ ...++ ....+++.++|+
T Consensus 180 ~dp~tg~lliLS~~s----------~~L~~~d~~g~~~~~~~L~~g~~~l--------~~~~~-----qpEGia~d~~G~ 236 (255)
T 3qqz_A 180 FNQQKNTLLVLSHES----------RALQEVTLVGEVIGEMSLTKGSRGL--------SHNIK-----QAEGVAMDASGN 236 (255)
T ss_dssp EETTTTEEEEEETTT----------TEEEEECTTCCEEEEEECSTTGGGC--------SSCCC-----SEEEEEECTTCC
T ss_pred EcCCCCeEEEEECCC----------CeEEEEcCCCCEEEEEEcCCccCCc--------ccccC-----CCCeeEECCCCC
Confidence 888888888888664 56888887653111 111111000 01111 234678999996
Q ss_pred EEEEEEEeCCeEEEEEEECCC
Q 003363 457 TMLLSSIWGSSQVIISVNVSS 477 (826)
Q Consensus 457 ~l~~~~~~~~~~~l~~vdl~t 477 (826)
||+++. . ..+|++...+
T Consensus 237 -lyIvsE-~--n~~y~f~~~~ 253 (255)
T 3qqz_A 237 -IYIVSE-P--NRFYRFTPQS 253 (255)
T ss_dssp -EEEEET-T--TEEEEEEC--
T ss_pred -EEEEcC-C--ceEEEEEecC
Confidence 776642 2 2677776543
No 476
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.69 E-value=0.00033 Score=81.94 Aligned_cols=98 Identities=14% Similarity=0.187 Sum_probs=65.7
Q ss_pred CceEEEEEccCCceEeccCCCC-CCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhh
Q 003363 272 QPSLFVININSGEVQAVKGIPK-SLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEAS 350 (826)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~~-~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 350 (826)
...|++++++++..+.+ ... ......+++.|++.. |+++.+.. ...|+++++
T Consensus 474 ~~~I~v~d~dg~~~~~l--~~~~~~~P~giavDp~~g~----ly~td~~~-------------~~~I~~~~~-------- 526 (699)
T 1n7d_A 474 LGTVSVADTKGVKRKTL--FREQGSKPRAIVVDPVHGF----MYWTDWGT-------------PAKIKKGGL-------- 526 (699)
T ss_dssp TSCEEEEBSSSCCEEEE--CCCSSCCCCCEECCSSSSC----CEECCCSS-------------SCCEEBCCS--------
T ss_pred CCeEEEEecCCCceEEE--EeCCCCCcceEEEccCCCc----EEEcccCC-------------CCeEEEEeC--------
Confidence 36799999988777666 333 235667899998887 77665321 136888887
Q ss_pred hhhhhcCCCCCCcceec-CCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCC
Q 003363 351 ELELKESSSEDLPVVNL-TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 351 ~~~~~~~~~~~~~~~~L-t~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
++...+.+ ..........+|+|++++|+|.... ...|+++++++..
T Consensus 527 ---------dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~----------~~~I~~~d~dG~~ 573 (699)
T 1n7d_A 527 ---------NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK----------LHSISSIDVNGGN 573 (699)
T ss_dssp ---------SSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT----------TTEEEEECSSSSC
T ss_pred ---------CCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC----------CCeEEEEccCCCc
Confidence 44333333 2333446678999999999887744 2679999987633
No 477
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=97.68 E-value=0.00025 Score=70.54 Aligned_cols=135 Identities=17% Similarity=0.171 Sum_probs=81.1
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCc-cchHH----------------HHHHHHCCcEEEEECC-CCCC
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLS-SYSKS----------------LAFLSSVGYSLLIVNY-RGSL 633 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~-~~~~~----------------~~~la~~G~~Vl~~d~-rG~~ 633 (826)
.+..+..|++...+ .....|+||+++|||+..... ..... ...+ .+-..++-+|. .|.
T Consensus 30 ~~~~lFywf~es~~--~~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW-~~~anvlfiDqPvGt- 105 (255)
T 1whs_A 30 AGRSLFYLLQEAPE--DAQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRW-NKVANVLFLDSPAGV- 105 (255)
T ss_dssp TTEEEEEEEECCCG--GGCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCG-GGTSEEEEECCSTTS-
T ss_pred CCcEEEEEEEEecC--CCCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCcccc-cccCCEEEEecCCCC-
Confidence 45678888886542 345789999999999875332 11000 0001 12367899995 453
Q ss_pred CCchhhhhcCCCCCC-cchHHHHHHHHHHHHH-cCCCCCCcEEEEEecchHHHHHHHHHhC------CCceeEEEecCCc
Q 003363 634 GFGEEALQSLPGKVG-SQDVNDVLTAIDHVID-MGLANPSKVTVVGGSHGGFLTTHLIGQA------PDKFVAAAARNPL 705 (826)
Q Consensus 634 g~G~~~~~~~~~~~~-~~~~~D~~~~i~~l~~-~~~~d~~rv~l~G~S~GG~~a~~~a~~~------p~~~~a~v~~~p~ 705 (826)
|+............+ ....+|+..+++...+ .+.....++.|+|+|+||..+..+|..- .-.++++++.+|+
T Consensus 106 GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inLkGi~ign~~ 185 (255)
T 1whs_A 106 GFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINLKGFMVGNGL 185 (255)
T ss_dssp TTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEEEEEEEEEEC
T ss_pred ccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCcccccceEEecCCc
Confidence 343321110000111 2235666666654444 3445567899999999999987776421 2358999999999
Q ss_pred cchhh
Q 003363 706 CNLAL 710 (826)
Q Consensus 706 ~~~~~ 710 (826)
++...
T Consensus 186 ~d~~~ 190 (255)
T 1whs_A 186 IDDYH 190 (255)
T ss_dssp CBHHH
T ss_pred cCHHH
Confidence 88643
No 478
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=97.65 E-value=0.00021 Score=79.10 Aligned_cols=111 Identities=17% Similarity=0.151 Sum_probs=76.7
Q ss_pred CCCcEEEEEcCCCCCCCCccch----HHHHHHHHCCcEEEEECCCCCCCCchhhh------h--cCCCCCCcchHHHHHH
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYS----KSLAFLSSVGYSLLIVNYRGSLGFGEEAL------Q--SLPGKVGSQDVNDVLT 657 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~----~~~~~la~~G~~Vl~~d~rG~~g~G~~~~------~--~~~~~~~~~~~~D~~~ 657 (826)
+..|++|++-| -+. ...+. .......+.|-.++...+|- ||.+.. + .+..-...+.+.|+..
T Consensus 41 ~~gPIfl~~gG-Eg~--~~~~~~~~g~~~~lA~~~~a~~v~lEHRy---YG~S~P~~~~st~~~nL~yLt~eQALaD~a~ 114 (472)
T 4ebb_A 41 GEGPIFFYTGN-EGD--VWAFANNSAFVAELAAERGALLVFAEHRY---YGKSLPFGAQSTQRGHTELLTVEQALADFAE 114 (472)
T ss_dssp TTCCEEEEECC-SSC--HHHHHHHCHHHHHHHHHHTCEEEEECCTT---STTCCTTGGGGGSTTSCTTCSHHHHHHHHHH
T ss_pred CCCcEEEEECC-Ccc--ccccccCccHHHHHHHHhCCeEEEEeccc---ccCCcCCCCCCccccccccCCHHHHHHHHHH
Confidence 34688888744 222 11111 12334456789999999997 565532 1 1111222445789999
Q ss_pred HHHHHHHcCCCCCCcEEEEEecchHHHHHHHHHhCCCceeEEEecCCcc
Q 003363 658 AIDHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQAPDKFVAAAARNPLC 706 (826)
Q Consensus 658 ~i~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~~p~~~~a~v~~~p~~ 706 (826)
.++++.+.......++.++|.|+||.+++++-.++|+++.++++.++++
T Consensus 115 fi~~~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSApv 163 (472)
T 4ebb_A 115 LLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPV 163 (472)
T ss_dssp HHHHHHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCCT
T ss_pred HHHHHHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccce
Confidence 9999887755556799999999999999999999999999988877643
No 479
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.62 E-value=0.0094 Score=62.60 Aligned_cols=152 Identities=11% Similarity=0.061 Sum_probs=83.3
Q ss_pred CceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhh
Q 003363 272 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (826)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (826)
...|+++|.++|++....+...-..+..++++|||+ |+++.. ....|+++|.
T Consensus 68 ~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-----l~v~d~--------------~~~~v~~~~~--------- 119 (329)
T 3fvz_A 68 EDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-----YWVTDV--------------ALHQVFKLDP--------- 119 (329)
T ss_dssp SCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-----EEEEET--------------TTTEEEEECT---------
T ss_pred CCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-----EEEEEC--------------CCCEEEEEeC---------
Confidence 468999999988876552222223567889999998 655541 2236888886
Q ss_pred hhhhcCCCCCC--cceecC---------CCCccccCceecC-CCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCc
Q 003363 352 LELKESSSEDL--PVVNLT---------ESISSAFFPRFSP-DGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSS 419 (826)
Q Consensus 352 ~~~~~~~~~~~--~~~~Lt---------~~~~~~~~p~~Sp-DG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~ 419 (826)
++. ....+. .........+++| +|+ |++.... ....|+++|.++ ....
T Consensus 120 --------~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~---------~~~~I~~~~~~g-~~~~- 179 (329)
T 3fvz_A 120 --------HSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGY---------CNSRIVQFSPSG-KFVT- 179 (329)
T ss_dssp --------TCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECS---------SCCEEEEECTTS-CEEE-
T ss_pred --------CCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCC---------CCCeEEEEcCCC-CEEE-
Confidence 333 233331 1122355678999 555 4444421 125788998433 2211
Q ss_pred ccceeeeeeeeeccCCCC--CcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEe
Q 003363 420 LEKIVDVIPVVQCAEGDC--FPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRI 483 (826)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~--f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~l 483 (826)
.+.....+. -++ ....+..++++||+..||++. .+...|.++|+++|+....
T Consensus 180 ---------~~~~~g~~~~~~~~-~~~~p~gia~d~~~g~l~v~d--~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 180 ---------QWGEESSGSSPRPG-QFSVPHSLALVPHLDQLCVAD--RENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp ---------EECEECCSSSCCTT-EESCEEEEEEETTTTEEEEEE--TTTTEEEEEETTTCCEEEE
T ss_pred ---------EeccCCCCCCCCCc-ccCCCcEEEEECCCCEEEEEE--CCCCEEEEEECCCCcEEEE
Confidence 010000000 000 001234678899966677764 3444677888886776544
No 480
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.61 E-value=0.015 Score=59.57 Aligned_cols=234 Identities=11% Similarity=0.064 Sum_probs=123.1
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSK 233 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~ 233 (826)
......+++|||+ |++.... ...++.+...+...... ..... . ...++.++|||+ |++...
T Consensus 15 ~~~~~i~~d~~g~-l~v~~~~---~~~v~~~d~~~~~~~~~-~~~~~-~------~~~~i~~~~~g~-l~v~~~------ 75 (299)
T 2z2n_A 15 TGPYGITVSDKGK-VWITQHK---ANMISCINLDGKITEYP-LPTPD-A------KVMCLTISSDGE-VWFTEN------ 75 (299)
T ss_dssp CCEEEEEECTTSC-EEEEETT---TTEEEEECTTCCEEEEE-CSSTT-C------CEEEEEECTTSC-EEEEET------
T ss_pred CCccceEECCCCC-EEEEecC---CCcEEEEcCCCCeEEec-CCccc-C------ceeeEEECCCCC-EEEeCC------
Confidence 3577889999997 3333221 22466555334433322 22111 1 126788999987 444321
Q ss_pred CCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCC-CCCccceEEEeeCCCCCccE
Q 003363 234 PTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIP-KSLSVGQVVWAPLNEGLHQY 312 (826)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~-~~~~~~~~~wSPDg~~~~~~ 312 (826)
....|+++|.+ ++.+.+. .+ ....+..+++.|||+
T Consensus 76 -------------------------------------~~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~~~~g~----- 111 (299)
T 2z2n_A 76 -------------------------------------AANKIGRITKK-GIIKEYT-LPNPDSAPYGITEGPNGD----- 111 (299)
T ss_dssp -------------------------------------TTTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSC-----
T ss_pred -------------------------------------CCCeEEEECCC-CcEEEEe-CCCcCCCceeeEECCCCC-----
Confidence 12468888876 5554442 22 233566788899886
Q ss_pred EEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceec--CCCCccccCceecCCCCEEEEEe
Q 003363 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL--TESISSAFFPRFSPDGKFLVFLS 390 (826)
Q Consensus 313 lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L--t~~~~~~~~p~~SpDG~~l~f~s 390 (826)
|++... ....|+++|. . +....+ ...........+++||+ |++..
T Consensus 112 l~v~~~--------------~~~~i~~~d~-----------------~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~ 158 (299)
T 2z2n_A 112 IWFTEM--------------NGNRIGRITD-----------------D-GKIREYELPNKGSYPSFITLGSDNA-LWFTE 158 (299)
T ss_dssp EEEEET--------------TTTEEEEECT-----------------T-CCEEEEECSSTTCCEEEEEECTTSC-EEEEE
T ss_pred EEEEec--------------CCceEEEECC-----------------C-CCEEEecCCCCCCCCceEEEcCCCC-EEEEe
Confidence 666541 1236888875 2 222222 22233456678899996 44433
Q ss_pred ccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEE
Q 003363 391 AKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVI 470 (826)
Q Consensus 391 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l 470 (826)
.. ...|+++|. ++..... . .+.. . ..+..+.+.+||+ |+++. .....|
T Consensus 159 ~~----------~~~i~~~~~-~g~~~~~--------~---~~~~--~-----~~~~~i~~~~~g~-l~v~~--~~~~~i 206 (299)
T 2z2n_A 159 NQ----------NNAIGRITE-SGDITEF--------K---IPTP--A-----SGPVGITKGNDDA-LWFVE--IIGNKI 206 (299)
T ss_dssp TT----------TTEEEEECT-TCCEEEE--------E---CSST--T-----CCEEEEEECTTSS-EEEEE--TTTTEE
T ss_pred CC----------CCEEEEEcC-CCcEEEe--------e---CCCC--C-----CcceeEEECCCCC-EEEEc--cCCceE
Confidence 22 256899987 4332111 0 0000 0 0123566788887 66553 233468
Q ss_pred EEEECCCCcEEEecCCC--CCeeeEEEeecCCEEEEEEeCCCCCCeEEEEee
Q 003363 471 ISVNVSSGELLRITPAE--SNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGYF 520 (826)
Q Consensus 471 ~~vdl~tg~~~~lt~~~--~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~~ 520 (826)
+++|. +++...+.... .......++++|+ +++.... ...|++++.
T Consensus 207 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~---~~~i~~~d~ 253 (299)
T 2z2n_A 207 GRITT-SGEITEFKIPTPNARPHAITAGAGID-LWFTEWG---ANKIGRLTS 253 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECSTTC-EEEEETT---TTEEEEEET
T ss_pred EEECC-CCcEEEEECCCCCCCceeEEECCCCC-EEEeccC---CceEEEECC
Confidence 88898 77777653321 2233345566655 4444322 234666664
No 481
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.59 E-value=0.0042 Score=73.10 Aligned_cols=161 Identities=10% Similarity=0.107 Sum_probs=102.6
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCC-----ceeEEEec-CCCccccccCCCcccceeecCCCCeEEEEee
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQS-----QLEKEFHV-PQTVHGSVYADGWFEGISWNSDETLIAYVAE 227 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~-----~~~~~~~~-~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~ 227 (826)
.....+++.+.+.+|+++... ...|+.+...+ ....++.. .... .++++.+.++.|+++-.
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~---~~~I~~~~l~g~~~~~~~~~vi~~~l~~P----------~GLAvD~~~~~LY~tD~ 490 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLS---QRMICSTQLDRAHGVSSYDTVISRDIQAP----------DGLAVDWIHSNIYWTDS 490 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETT---TTEEEEEEC--------CEEEECSSCSCC----------CEEEEETTTTEEEEEET
T ss_pred CceEEEeecccCCeeEEeecc---ceeEEEEeccCCCCCcceeEEEecCCCCc----------ceeeeeecCCcEEEEec
Confidence 346678888888888766432 23466666332 22333321 1122 58888888888877521
Q ss_pred cCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCC-CccceEEEeeCC
Q 003363 228 EPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLN 306 (826)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg 306 (826)
....|+++++++...+.+ .... ..+..++..|.+
T Consensus 491 -------------------------------------------~~~~I~v~~ldG~~~~~l--~~~~l~~P~gIaVDp~~ 525 (791)
T 3m0c_C 491 -------------------------------------------VLGTVSVADTKGVKRKTL--FRENGSKPRAIVVDPVH 525 (791)
T ss_dssp -------------------------------------------TTTEEEEEETTSSSEEEE--EECTTCCEEEEEEETTT
T ss_pred -------------------------------------------CCCeEEEEeCCCCeEEEE--EeCCCCCcceEEEecCC
Confidence 236899999988777666 3222 346788999987
Q ss_pred CCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCC-CCccccCceecCCCCE
Q 003363 307 EGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKF 385 (826)
Q Consensus 307 ~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~ 385 (826)
.. |+++-+.. ...|+++++ ++...+.|.. ........++.+++++
T Consensus 526 g~----LYwtD~g~-------------~~~I~~~~~-----------------dG~~~~~lv~~~l~~P~GLavD~~~~~ 571 (791)
T 3m0c_C 526 GF----MYWTDWGT-------------PAKIKKGGL-----------------NGVDIYSLVTENIQWPNGITLDLLSGR 571 (791)
T ss_dssp TE----EEEEECSS-------------SCEEEEEET-----------------TSCCEEEEECSSCSCEEEEEEETTTTE
T ss_pred CC----EEEecCCC-------------CCeEEEEec-----------------CCCceEEEEeCCCCCceEEEEecCCCe
Confidence 76 87765322 136899998 5555444433 3345667889999999
Q ss_pred EEEEeccCCCCCCCCcccceEEEEeCCCCCC
Q 003363 386 LVFLSAKSSVDSGAHSATDSLHRIDWPTNGN 416 (826)
Q Consensus 386 l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~ 416 (826)
|+|.... ...|+++++++...
T Consensus 572 LYwaD~~----------~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 572 LYWVDSK----------LHSISSIDVNGGNR 592 (791)
T ss_dssp EEEEETT----------TTEEEEEETTSCSC
T ss_pred EEEEeCC----------CCcEEEEecCCCce
Confidence 9888643 25799999877543
No 482
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=97.58 E-value=0.00027 Score=77.32 Aligned_cols=126 Identities=21% Similarity=0.207 Sum_probs=76.4
Q ss_pred CeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHH------------H------HHCCcEEEEECC-CCCC
Q 003363 573 QKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAF------------L------SSVGYSLLIVNY-RGSL 633 (826)
Q Consensus 573 g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~------------l------a~~G~~Vl~~d~-rG~~ 633 (826)
+..+..|++...+ .....|+||++||||+.... + ..... + =.+-..++-+|. +|.|
T Consensus 31 ~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~Ss~--~-g~~~e~GP~~~~~~~~~l~~n~~sw~~~~~~lfiDqP~GtG 105 (452)
T 1ivy_A 31 SKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSL--D-GLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESPAGVG 105 (452)
T ss_dssp TEEEEEEEECCSS--CGGGSCEEEEECCTTTBCTH--H-HHHTTTSSEEECTTSSCEEECTTCGGGSSEEEEECCSTTST
T ss_pred CCeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHH--H-HHHHhcCCcEEeCCCceeeeCCCcccccccEEEEecCCCCC
Confidence 4678878776442 33568999999999987431 1 11110 0 013468999995 6644
Q ss_pred CCchhhhhcCCCCCCc---chHHHHHHHH-HHHHHcCCCCCCcEEEEEecchHHHHHHHHHh----CCCceeEEEecCCc
Q 003363 634 GFGEEALQSLPGKVGS---QDVNDVLTAI-DHVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ----APDKFVAAAARNPL 705 (826)
Q Consensus 634 g~G~~~~~~~~~~~~~---~~~~D~~~~i-~~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~----~p~~~~a~v~~~p~ 705 (826)
+.... ...+.. ...+|+..++ +|+.+.+....+++.|+|+|+||..+..+|.. .+-.++++++.+|+
T Consensus 106 -fS~~~----~~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ign~~ 180 (452)
T 1ivy_A 106 -FSYSD----DKFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 180 (452)
T ss_dssp -TCEES----SCCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred -cCCcC----CCCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEEecCCc
Confidence 33211 111211 1244444444 44444444556889999999999966555542 34578999999998
Q ss_pred cch
Q 003363 706 CNL 708 (826)
Q Consensus 706 ~~~ 708 (826)
++.
T Consensus 181 ~d~ 183 (452)
T 1ivy_A 181 SSY 183 (452)
T ss_dssp SBH
T ss_pred cCh
Confidence 764
No 483
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.55 E-value=0.0055 Score=70.36 Aligned_cols=204 Identities=11% Similarity=0.051 Sum_probs=122.6
Q ss_pred cccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCce--eEEEecC-CCccccccCCCcccceeecCCCCeEEEEeecCC
Q 003363 154 TGASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQL--EKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPS 230 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~--~~~~~~~-~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~ 230 (826)
.......+++++.+|+++... ...++.+...+.. ..+.... ... .++++.+.++.|++.-.
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~---~~~I~r~~~~g~~~~~~v~~~~~~~P----------~GlAvD~~~~~ly~~d~--- 103 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVS---EEAIKRTEFNKTESVQNVVVSGLLSP----------DGLACDWLGEKLYWTDS--- 103 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETT---TTEEEEEEC-----CEEEECSSCSCE----------EEEEEETTTTEEEEEET---
T ss_pred CceEEEEEEeCCCEEEEEECC---CCeEEEEEccCCCceEEEEeCCCCCc----------CeEEEEecCCEEEEEeC---
Confidence 356788999999988776432 2356666633332 2222211 122 68889998888877522
Q ss_pred CCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCc
Q 003363 231 PSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLH 310 (826)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~ 310 (826)
....|.+.++++...+.+. ...-..+.+++..|.+..
T Consensus 104 ----------------------------------------~~~~I~v~~~dG~~~~~l~-~~~l~~P~~Iavdp~~g~-- 140 (619)
T 3s94_A 104 ----------------------------------------ETNRIEVSNLDGSLRKVLF-WQELDQPRAIALDPSSGF-- 140 (619)
T ss_dssp ----------------------------------------TTTEEEEEETTSCSCEEEE-CSSCSCCCCEEEETTTTE--
T ss_pred ----------------------------------------CCCEEEEEECCCCCEEEEE-eCCCCCCceEEEecCCCe--
Confidence 2367999999887766662 122235678899998776
Q ss_pred cEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecC-CCCccccCceecCCCCEEEEE
Q 003363 311 QYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFL 389 (826)
Q Consensus 311 ~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~l~f~ 389 (826)
|+|+-+.. ...|++.++ ++...+.+. .........++++++++|++.
T Consensus 141 --ly~tD~g~-------------~~~I~r~~~-----------------dG~~~~~l~~~~~~~P~Glald~~~~~LY~a 188 (619)
T 3s94_A 141 --MYWTDWGE-------------VPKIERAGM-----------------DGSSRFIIINSEIYWPNGLTLDYEEQKLYWA 188 (619)
T ss_dssp --EEEEECSS-------------SCEEEEEET-----------------TSCSCEEEECSSCSSEEEEEEETTTTEEEEE
T ss_pred --EEEeccCC-------------CCEEEEEEC-----------------CCCceEEEEeCCCCCCcEEEEEccCCEEEEE
Confidence 88776432 236889987 554444443 333445677899999999888
Q ss_pred eccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEE
Q 003363 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQV 469 (826)
Q Consensus 390 s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~ 469 (826)
... ...|+++|+++...+.+..+. +. ....+++..| .||++ + .....
T Consensus 189 D~~----------~~~I~~~~~dG~~~~~~~~~~--------------~~-----~P~gi~~~~~--~ly~t-d-~~~~~ 235 (619)
T 3s94_A 189 DAK----------LNFIHKSNLDGTNRQAVVKGS--------------LP-----HPFALTLFED--ILYWT-D-WSTHS 235 (619)
T ss_dssp ETT----------TCCEEEESSSCCEEC----------------------------CCCEEESSS--EEEEE-C-TTTCS
T ss_pred eCC----------CCeEEEecCCCCccEEEEeCC--------------CC-----CceEEEEeCC--EEEEe-c-CCCCE
Confidence 644 257999998875443322110 00 1123444433 67665 2 34557
Q ss_pred EEEEECCCCcEE
Q 003363 470 IISVNVSSGELL 481 (826)
Q Consensus 470 l~~vdl~tg~~~ 481 (826)
|+++|..+|+..
T Consensus 236 V~~~d~~tg~~~ 247 (619)
T 3s94_A 236 ILACNKYTGEGL 247 (619)
T ss_dssp EEEEESSSCCCC
T ss_pred EEEEECCCCccc
Confidence 889998877644
No 484
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.50 E-value=0.019 Score=65.87 Aligned_cols=178 Identities=10% Similarity=-0.022 Sum_probs=110.0
Q ss_pred ceEEEEEccCCceEeccCCCCC-CccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhh
Q 003363 273 PSLFVININSGEVQAVKGIPKS-LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~-~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (826)
..|++++++++.++.+ .... ..+..++..+.++. |+++-. ....|.++++
T Consensus 59 ~~I~r~~~~g~~~~~v--~~~g~~~P~GlAvD~~~~~----LY~tD~--------------~~~~I~v~~~--------- 109 (628)
T 4a0p_A 59 KTISRAFMNGSALEHV--VEFGLDYPEGMAVDWLGKN----LYWADT--------------GTNRIEVSKL--------- 109 (628)
T ss_dssp TEEEEEETTSCSCEEE--ECSSCSCCCEEEEETTTTE----EEEEET--------------TTTEEEEEET---------
T ss_pred CeEEEEECCCCCcEEE--EeCCCCCcceEEEEeCCCE----EEEEEC--------------CCCEEEEEec---------
Confidence 6799999988776655 2222 35667888888887 877642 2237899997
Q ss_pred hhhhcCCCCCCcceecC-CCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeee
Q 003363 352 LELKESSSEDLPVVNLT-ESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (826)
Q Consensus 352 ~~~~~~~~~~~~~~~Lt-~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 430 (826)
++...+.|. .........++.|...+|+|.... ...+|+++++++.....+...
T Consensus 110 --------dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g---------~~~~I~r~~~dG~~~~~l~~~-------- 164 (628)
T 4a0p_A 110 --------DGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG---------GKPKIDRAAMDGSERTTLVPN-------- 164 (628)
T ss_dssp --------TSTTCEEEECSSCCCEEEEEEETTTTEEEEEECS---------SSCEEEEEETTSCSCEEEECS--------
T ss_pred --------CCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCC---------CCCEEEEEeCCCCceEEEECC--------
Confidence 555444443 333445677889977788776532 135799999887554322110
Q ss_pred eccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEeCCC
Q 003363 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSSSPV 510 (826)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s~~~ 510 (826)
+ .....++++++++.||++- .....|+++|++++..+.+..... .-..++.+++.+|++-..
T Consensus 165 -------~-----~~P~GlalD~~~~~LY~aD--~~~~~I~~~d~dG~~~~v~~~~l~--~P~glav~~~~ly~tD~~-- 226 (628)
T 4a0p_A 165 -------V-----GRANGLTIDYAKRRLYWTD--LDTNLIESSNMLGLNREVIADDLP--HPFGLTQYQDYIYWTDWS-- 226 (628)
T ss_dssp -------C-----SSEEEEEEETTTTEEEEEE--TTTTEEEEEETTSCSCEEEEECCS--CEEEEEEETTEEEEEETT--
T ss_pred -------C-----CCcceEEEccccCEEEEEE--CCCCEEEEEcCCCCceEEeeccCC--CceEEEEECCEEEEecCC--
Confidence 0 0223567888888898864 344578999998776654433221 122455567777766532
Q ss_pred CCCeEEEEeeccc
Q 003363 511 DVPQVKYGYFVDK 523 (826)
Q Consensus 511 ~p~~l~~~~~~~~ 523 (826)
...|+.++..++
T Consensus 227 -~~~I~~~dk~tg 238 (628)
T 4a0p_A 227 -RRSIERANKTSG 238 (628)
T ss_dssp -TTEEEEEETTTC
T ss_pred -CCEEEEEECCCC
Confidence 335777775433
No 485
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.48 E-value=0.0034 Score=62.56 Aligned_cols=200 Identities=12% Similarity=0.025 Sum_probs=110.6
Q ss_pred EEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCCC
Q 003363 157 SAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKPT 235 (826)
Q Consensus 157 ~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~~ 235 (826)
....++ || . +|.+....+...+..++ ..++..+...++... .+....++|++|+.+..
T Consensus 46 qGL~~~-~~-~-LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~----------FgeGit~~g~~ly~ltw-------- 104 (262)
T 3nol_A 46 EGFFYR-NG-Y-FYESTGLNGRSSIRKVDIESGKTLQQIELGKRY----------FGEGISDWKDKIVGLTW-------- 104 (262)
T ss_dssp EEEEEE-TT-E-EEEEEEETTEEEEEEECTTTCCEEEEEECCTTC----------CEEEEEEETTEEEEEES--------
T ss_pred ceEEEE-CC-E-EEEECCCCCCceEEEEECCCCcEEEEEecCCcc----------ceeEEEEeCCEEEEEEe--------
Confidence 345666 54 4 46665544556788888 677777777665443 23335567887866522
Q ss_pred ccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEE
Q 003363 236 FSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVF 315 (826)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf 315 (826)
....++++|.++.++..- ++... .....++||+. |+.
T Consensus 105 -----------------------------------~~~~v~v~D~~t~~~~~t--i~~~~--eG~glt~dg~~----L~~ 141 (262)
T 3nol_A 105 -----------------------------------KNGLGFVWNIRNLRQVRS--FNYDG--EGWGLTHNDQY----LIM 141 (262)
T ss_dssp -----------------------------------SSSEEEEEETTTCCEEEE--EECSS--CCCCEEECSSC----EEE
T ss_pred -----------------------------------eCCEEEEEECccCcEEEE--EECCC--CceEEecCCCE----EEE
Confidence 237899999998876533 12111 23456689986 644
Q ss_pred EeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCC--CCcc---ccCceecCCCCEEEEE
Q 003363 316 VGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTE--SISS---AFFPRFSPDGKFLVFL 389 (826)
Q Consensus 316 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~--~~~~---~~~p~~SpDG~~l~f~ 389 (826)
++ ....|+.+|. ++.+ ..++.- .... .....|. ||+ | |.
T Consensus 142 -Sd--------------Gs~~i~~iDp-----------------~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-l-ya 186 (262)
T 3nol_A 142 -SD--------------GTPVLRFLDP-----------------ESLTPVRTITVTAHGEELPELNELEWV-DGE-I-FA 186 (262)
T ss_dssp -CC--------------SSSEEEEECT-----------------TTCSEEEEEECEETTEECCCEEEEEEE-TTE-E-EE
T ss_pred -EC--------------CCCeEEEEcC-----------------CCCeEEEEEEeccCCccccccceeEEE-CCE-E-EE
Confidence 42 2337999997 4443 233322 1111 1224565 774 4 44
Q ss_pred eccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCC--CCcccccCCCCCCccccCCCEEEEEEEeCCe
Q 003363 390 SAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGD--CFPGLYSSSILSNPWLSDGCTMLLSSIWGSS 467 (826)
Q Consensus 390 s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~ 467 (826)
..- ....|.++|..+++... .+++-...... ..+ -...+..++|+|++++||++. ...
T Consensus 187 n~w---------~~~~I~vIDp~tG~V~~-------~Id~~~L~~~~~~~~~--~~~vlNGIA~dp~~~~lfVTG--K~W 246 (262)
T 3nol_A 187 NVW---------QTNKIVRIDPETGKVTG-------IIDLNGILAEAGPLPS--PIDVLNGIAWDKEHHRLFVTG--KLW 246 (262)
T ss_dssp EET---------TSSEEEEECTTTCBEEE-------EEECTTGGGGSCSCCS--SCCCEEEEEEETTTTEEEEEE--TTC
T ss_pred EEc---------cCCeEEEEECCCCcEEE-------EEECCcCccccccccC--cCCceEEEEEcCCCCEEEEEC--CCC
Confidence 432 23689999998876521 11110000000 000 011345789999999888764 445
Q ss_pred EEEEEEEC
Q 003363 468 QVIISVNV 475 (826)
Q Consensus 468 ~~l~~vdl 475 (826)
..+|.|.+
T Consensus 247 p~~~ev~~ 254 (262)
T 3nol_A 247 PKVFEITL 254 (262)
T ss_dssp SEEEEEEE
T ss_pred CceEEEEE
Confidence 57777654
No 486
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.43 E-value=0.0056 Score=62.64 Aligned_cols=94 Identities=9% Similarity=0.045 Sum_probs=54.0
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhh
Q 003363 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (826)
..|+++|.++.....+........+..++++|||+ |+++.. ....|+++|.
T Consensus 142 ~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 192 (286)
T 1q7f_A 142 MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQE-----IFISDN--------------RAHCVKVFNY---------- 192 (286)
T ss_dssp TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSE-----EEEEEG--------------GGTEEEEEET----------
T ss_pred CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCC-----EEEEEC--------------CCCEEEEEcC----------
Confidence 56888887655444442111223467889999987 555431 1236888886
Q ss_pred hhhcCCCCCCcceecCCC--CccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCC
Q 003363 353 ELKESSSEDLPVVNLTES--ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWP 412 (826)
Q Consensus 353 ~~~~~~~~~~~~~~Lt~~--~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~ 412 (826)
.+.....+... ........++|||+ |+ ++... ....|.++|..
T Consensus 193 -------~g~~~~~~~~~g~~~~p~~i~~d~~G~-l~-v~~~~--------~~~~i~~~~~~ 237 (286)
T 1q7f_A 193 -------EGQYLRQIGGEGITNYPIGVGINSNGE-IL-IADNH--------NNFNLTIFTQD 237 (286)
T ss_dssp -------TCCEEEEESCTTTSCSEEEEEECTTCC-EE-EEECS--------SSCEEEEECTT
T ss_pred -------CCCEEEEEccCCccCCCcEEEECCCCC-EE-EEeCC--------CCEEEEEECCC
Confidence 44444444322 23456778999996 33 33221 11268899854
No 487
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.42 E-value=0.0095 Score=61.68 Aligned_cols=161 Identities=12% Similarity=0.202 Sum_probs=93.8
Q ss_pred ccEEEEeCCCCCeEEEEecCCC------------CCCeEEEEecCCceeEEEecCCCccccccCCCcccceeec----CC
Q 003363 155 GASAVVPSPSGSKLLVVRNPEN------------ESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWN----SD 218 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~------------~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wS----PD 218 (826)
.....+++|+|+ |++.....+ ....++.+...++...+....... .++.|+ ||
T Consensus 118 ~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~----------~~i~~~~~~d~d 186 (314)
T 1pjx_A 118 GCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFP----------NGIAVRHMNDGR 186 (314)
T ss_dssp CCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSE----------EEEEEEECTTSC
T ss_pred CCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCCCCEEEeccCCCCc----------ceEEEecccCCC
Confidence 467889999996 444432210 113566666445554443321222 578899 99
Q ss_pred CCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEcc-CCceE---eccCCCCC
Q 003363 219 ETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININ-SGEVQ---AVKGIPKS 294 (826)
Q Consensus 219 g~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~-~g~~~---~l~~~~~~ 294 (826)
|+.|++... ....|+++|++ +++.. .+...+..
T Consensus 187 g~~l~v~~~-------------------------------------------~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 187 PYQLIVAET-------------------------------------------PTKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp EEEEEEEET-------------------------------------------TTTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred CCEEEEEEC-------------------------------------------CCCeEEEEECCCCCccccceEEEECCCC
Confidence 987765422 12568888876 45422 11112222
Q ss_pred --CccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc-ceecCCCC
Q 003363 295 --LSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP-VVNLTESI 371 (826)
Q Consensus 295 --~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~Lt~~~ 371 (826)
..+..+++++||+ |++... ....|+++|. ++++ ...+....
T Consensus 224 ~~~~p~~i~~d~~G~-----l~v~~~--------------~~~~i~~~d~-----------------~~g~~~~~~~~~~ 267 (314)
T 1pjx_A 224 HEGGADGMDFDEDNN-----LLVANW--------------GSSHIEVFGP-----------------DGGQPKMRIRCPF 267 (314)
T ss_dssp SSCEEEEEEEBTTCC-----EEEEEE--------------TTTEEEEECT-----------------TCBSCSEEEECSS
T ss_pred CCCCCCceEECCCCC-----EEEEEc--------------CCCEEEEEcC-----------------CCCcEeEEEeCCC
Confidence 3456789999996 665542 1236888886 4333 33333333
Q ss_pred ccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCC
Q 003363 372 SSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 372 ~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
.......|+|||++|+...... ..|+++++...+
T Consensus 268 ~~~~~i~~~~dg~~l~v~~~~~----------~~l~~~~~~~~g 301 (314)
T 1pjx_A 268 EKPSNLHFKPQTKTIFVTEHEN----------NAVWKFEWQRNG 301 (314)
T ss_dssp SCEEEEEECTTSSEEEEEETTT----------TEEEEEECSSCB
T ss_pred CCceeEEECCCCCEEEEEeCCC----------CeEEEEeCCCCC
Confidence 4567788999999876555432 469999887643
No 488
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.42 E-value=0.011 Score=58.42 Aligned_cols=178 Identities=14% Similarity=0.213 Sum_probs=100.8
Q ss_pred CceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhh
Q 003363 272 QPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASE 351 (826)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~ 351 (826)
...|.++|+++|++..-...+.. ......+++++. |+-..| +...++++|.
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~~--~fgeGi~~~~~~----ly~ltw--------------~~~~v~v~D~--------- 92 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPPP--YFGAGIVAWRDR----LIQLTW--------------RNHEGFVYDL--------- 92 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCTT--CCEEEEEEETTE----EEEEES--------------SSSEEEEEET---------
T ss_pred CceEEEEECCCCCEEEEEeCCCC--cceeEEEEeCCE----EEEEEe--------------eCCEEEEEEC---------
Confidence 47899999999998654212222 223345667776 766664 3347999998
Q ss_pred hhhhcCCCCCCc-ceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeee
Q 003363 352 LELKESSSEDLP-VVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (826)
Q Consensus 352 ~~~~~~~~~~~~-~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 430 (826)
++.+ ..++.... ....+++||++|+ .|+. ..+|+.+|..+.+... -+++-
T Consensus 93 --------~tl~~~~ti~~~~---~Gwglt~dg~~L~-vSdg----------s~~l~~iDp~t~~~~~-------~I~V~ 143 (243)
T 3mbr_X 93 --------ATLTPRARFRYPG---EGWALTSDDSHLY-MSDG----------TAVIRKLDPDTLQQVG-------SIKVT 143 (243)
T ss_dssp --------TTTEEEEEEECSS---CCCEEEECSSCEE-EECS----------SSEEEEECTTTCCEEE-------EEECE
T ss_pred --------CcCcEEEEEeCCC---CceEEeeCCCEEE-EECC----------CCeEEEEeCCCCeEEE-------EEEEc
Confidence 4544 33443221 2345678998764 4532 3679999988754321 11111
Q ss_pred eccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC-------------CC-CeeeEEEe
Q 003363 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA-------------ES-NFSWSLLT 496 (826)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~-------------~~-~~~~~~~s 496 (826)
.. ...+ ..+..+.|. ||+ || ...+. ...|.+||+++|++.....- .. .....+++
T Consensus 144 ~~--g~~~-----~~lNeLe~~-~G~-ly-anvw~-s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d 212 (243)
T 3mbr_X 144 AG--GRPL-----DNLNELEWV-NGE-LL-ANVWL-TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFD 212 (243)
T ss_dssp ET--TEEC-----CCEEEEEEE-TTE-EE-EEETT-TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEE
T ss_pred cC--Cccc-----ccceeeEEe-CCE-EE-EEECC-CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEc
Confidence 00 0000 012234454 664 65 44444 33799999999998754321 11 22445677
Q ss_pred ecCCEEEEEEeCCCCCCeEEEEeec
Q 003363 497 LDGDNIIAVSSSPVDVPQVKYGYFV 521 (826)
Q Consensus 497 ~dg~~l~~~~s~~~~p~~l~~~~~~ 521 (826)
++++.++.+.-.. |.+|-+.+.
T Consensus 213 ~~~~~lfVTGK~w---p~~~~v~~~ 234 (243)
T 3mbr_X 213 AEHDRLFVTGKRW---PMLYEIRLT 234 (243)
T ss_dssp TTTTEEEEEETTC---SEEEEEEEC
T ss_pred CCCCEEEEECCCC---CcEEEEEEe
Confidence 7888877777655 346655543
No 489
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.42 E-value=0.004 Score=63.72 Aligned_cols=185 Identities=14% Similarity=0.098 Sum_probs=98.8
Q ss_pred CccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccch
Q 003363 269 GKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSE 348 (826)
Q Consensus 269 ~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 348 (826)
+.....|+++|.++|++..-...........+.++|||+ |++.. . ..|+.+|.
T Consensus 11 ~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-----ilvs~-~---------------~~V~~~d~------ 63 (276)
T 3no2_A 11 GSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-----ILFSY-S---------------KGAKMITR------ 63 (276)
T ss_dssp CTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-----EEEEC-B---------------SEEEEECT------
T ss_pred eCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-----EEEeC-C---------------CCEEEECC------
Confidence 345689999999888876542122213567889999998 44432 1 14677775
Q ss_pred hhhhhhhcCCCCCCcceecCCC-CccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeee
Q 003363 349 ASELELKESSSEDLPVVNLTES-ISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVI 427 (826)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~Lt~~-~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~ 427 (826)
++....++..+ ......+.++|||+.|+-.+.. ...|+.+|.++......
T Consensus 64 -----------~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~----------~~~v~~vd~~Gk~l~~~-------- 114 (276)
T 3no2_A 64 -----------DGRELWNIAAPAGCEMQTARILPDGNALVAWCGH----------PSTILEVNMKGEVLSKT-------- 114 (276)
T ss_dssp -----------TSCEEEEEECCTTCEEEEEEECTTSCEEEEEEST----------TEEEEEECTTSCEEEEE--------
T ss_pred -----------CCCEEEEEcCCCCccccccEECCCCCEEEEecCC----------CCEEEEEeCCCCEEEEE--------
Confidence 33344444432 2245567899999987654431 24677777533111111
Q ss_pred eeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCCCeeeEEEeecCCEEEEEEe
Q 003363 428 PVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAESNFSWSLLTLDGDNIIAVSS 507 (826)
Q Consensus 428 ~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~~~~~~~~s~dg~~l~~~~s 507 (826)
..... ..+ ..........++||+.|+. . .....++.+|.+ |+...-.............++|+.++...
T Consensus 115 ---~~~~~--~~~-~~~~~~~v~~~~~G~~lv~-~--~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~- 183 (276)
T 3no2_A 115 ---EFETG--IER-PHAQFRQINKNKKGNYLVP-L--FATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACG- 183 (276)
T ss_dssp ---EECCS--CSS-GGGSCSCCEECTTSCEEEE-E--TTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECB-
T ss_pred ---eccCC--CCc-ccccccCceECCCCCEEEE-e--cCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeC-
Confidence 00000 000 0001234467889986543 2 344578889988 66544332222122234555666554332
Q ss_pred CCCCCCeEEEEeeccc
Q 003363 508 SPVDVPQVKYGYFVDK 523 (826)
Q Consensus 508 ~~~~p~~l~~~~~~~~ 523 (826)
. ..+|+.++..++
T Consensus 184 ~---~~~v~~~d~~tG 196 (276)
T 3no2_A 184 D---AHCFVQLNLESN 196 (276)
T ss_dssp T---TSEEEEECTTTC
T ss_pred C---CCeEEEEeCcCC
Confidence 2 235777775543
No 490
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.36 E-value=0.047 Score=55.65 Aligned_cols=172 Identities=11% Similarity=0.017 Sum_probs=92.0
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhh
Q 003363 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (826)
..|+++|.+ ++.+.+........+..+++.|+|+ |++... ....|+++|.
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~-----l~v~~~--------------~~~~i~~~~~---------- 132 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGD-----IWFTQL--------------NGDRIGKLTA---------- 132 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTC-----EEEEET--------------TTTEEEEECT----------
T ss_pred CeEEEECCC-CCeEEecCCCCCCCCccceECCCCC-----EEEEcc--------------CCCeEEEECC----------
Confidence 568888887 6665442111223566788888886 665541 1236888886
Q ss_pred hhhcCCCCCCcceec--CCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeee
Q 003363 353 ELKESSSEDLPVVNL--TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVV 430 (826)
Q Consensus 353 ~~~~~~~~~~~~~~L--t~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 430 (826)
+ ++...+ ...........+.+||+ |++.... ...|+++|. ++.....
T Consensus 133 -------~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~----------~~~i~~~~~-~g~~~~~----------- 181 (300)
T 2qc5_A 133 -------D-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQ----------NNSIGRITN-TGKLEEY----------- 181 (300)
T ss_dssp -------T-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETT----------TTEEEEECT-TCCEEEE-----------
T ss_pred -------C-CCEEEccCCCCCCCceeEEECCCCC-EEEEecC----------CCeEEEECC-CCcEEEe-----------
Confidence 4 443322 22233456678899998 4443322 246899987 3332110
Q ss_pred eccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCC--CCCeeeEEEeecCCEEEEEEeC
Q 003363 431 QCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPA--ESNFSWSLLTLDGDNIIAVSSS 508 (826)
Q Consensus 431 ~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~--~~~~~~~~~s~dg~~l~~~~s~ 508 (826)
..+... ..+..+.+.+||+ |+++.. ....|+++|. +++...+... ........++++|+ +++....
T Consensus 182 ~~~~~~-------~~~~~i~~d~~g~-l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~ 249 (300)
T 2qc5_A 182 PLPTNA-------AAPVGITSGNDGA-LWFVEI--MGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSE-IWFTEWG 249 (300)
T ss_dssp ECSSTT-------CCEEEEEECTTSS-EEEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC-EEEEETT
T ss_pred eCCCCC-------CCcceEEECCCCC-EEEEcc--CCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCC-EEEeccC
Confidence 001000 0123556778886 666532 3346888888 6676665322 12233344566655 4444322
Q ss_pred CCCCCeEEEEee
Q 003363 509 PVDVPQVKYGYF 520 (826)
Q Consensus 509 ~~~p~~l~~~~~ 520 (826)
...|+.++.
T Consensus 250 ---~~~i~~~~~ 258 (300)
T 2qc5_A 250 ---ANQIGRITN 258 (300)
T ss_dssp ---TTEEEEECT
T ss_pred ---CCeEEEECC
Confidence 234666664
No 491
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.26 E-value=0.0079 Score=63.65 Aligned_cols=68 Identities=9% Similarity=0.176 Sum_probs=37.4
Q ss_pred cccEEEEeCCCCCeEEEEecCC--CCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEE
Q 003363 154 TGASAVVPSPSGSKLLVVRNPE--NESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYV 225 (826)
Q Consensus 154 ~~~~~~~~SPdG~~la~~~~~~--~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~ 225 (826)
..+...+++|+|+ |+++.... .....++.++ .+++..+.+.++.... .......++.++|++..+++.
T Consensus 67 ~~p~gv~~d~~g~-L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~---~~~~~~~~v~vd~~~g~~yvt 137 (343)
T 2qe8_A 67 DTVLGIKSDGNGI-VWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPIT---LSNSFVNDLAVDLIHNFVYIS 137 (343)
T ss_dssp SCEEEEEECSSSE-EEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTS---CTTCCCCEEEEETTTTEEEEE
T ss_pred eEeeEEEEcCCCc-EEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhc---ccccccceEEEecCCCEEEEE
Confidence 4578899999986 55543210 0134577666 4566555555432210 001123688999987655443
No 492
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.24 E-value=0.076 Score=60.84 Aligned_cols=161 Identities=12% Similarity=0.065 Sum_probs=102.6
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEec-CCceeEEEecC-CCccccccCCCcccceeecCCCCeEEEEeecCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWS-QSQLEKEFHVP-QTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPS 232 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~-~~~~~~~~~~~-~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~ 232 (826)
......+.+.+.+|++.... ...++.+.. +...+.+.... ... .++++.+.++.|++.-.
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~---~~~I~r~~~~g~~~~~v~~~~~~~p----------~GlAvD~~~~~lY~tD~----- 411 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDE---VRAIRRSFIDGSGSQFVVTAQIAHP----------DGIAVDWVARNLYWTDT----- 411 (619)
T ss_dssp SEEEEEEETTTTEEEEEETT---TTEEEEEETTSCSCEEEECSSCSCC----------CEEEEETTTTEEEEEET-----
T ss_pred ccEEEEEEcCCCeEEEEeCC---CCeEEEEEcCCCccEEEEECCCCCc----------CceEEecccCcEEEEeC-----
Confidence 46677888888888776432 335777763 33444443221 122 57888887887876521
Q ss_pred CCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccE
Q 003363 233 KPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQY 312 (826)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~ 312 (826)
....|.+.++++...+.+. ...-..+.+++..|....
T Consensus 412 --------------------------------------~~~~I~v~~~~G~~~~~l~-~~~l~~P~~iavdp~~G~---- 448 (619)
T 3s94_A 412 --------------------------------------GTDRIEVTRLNGTMRKILI-SEDLEEPRAIVLDPMVGY---- 448 (619)
T ss_dssp --------------------------------------TTTEEEEEETTSCSCEEEE-CTTCCSEEEEEEETTTTE----
T ss_pred --------------------------------------CCCcEEEEeCCCCeEEEEE-ECCCCCeeeEEEEcCCCc----
Confidence 2367999999877666662 122235678899997665
Q ss_pred EEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCC-CCccccCceecCCCCEEEEEec
Q 003363 313 LVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE-SISSAFFPRFSPDGKFLVFLSA 391 (826)
Q Consensus 313 lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~-~~~~~~~p~~SpDG~~l~f~s~ 391 (826)
|+|+-+.. ...|+++++ ++...+.|.. ........++++++++|++...
T Consensus 449 ly~tD~g~-------------~~~I~r~~~-----------------dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~ 498 (619)
T 3s94_A 449 MYWTDWGE-------------IPKIERAAL-----------------DGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDA 498 (619)
T ss_dssp EEEEECSS-------------SCEEEEEET-----------------TSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEEecCCC-------------CCEEEEEcc-----------------CCCccEEEEeCCCCCCeeeEEcccCCEEEEEEC
Confidence 77775422 236888887 4444444433 3445567789999999988865
Q ss_pred cCCCCCCCCcccceEEEEeCCCCCC
Q 003363 392 KSSVDSGAHSATDSLHRIDWPTNGN 416 (826)
Q Consensus 392 ~~~~~~g~~~~~~~l~~~d~~~~~~ 416 (826)
.. ..|..+++++...
T Consensus 499 ~~----------~~I~~~~~dG~~~ 513 (619)
T 3s94_A 499 KT----------DKIEVMNTDGTGR 513 (619)
T ss_dssp TT----------TEEEEEESSSCCC
T ss_pred CC----------CEEEEEecCCCce
Confidence 42 5799999877544
No 493
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.23 E-value=0.012 Score=58.69 Aligned_cols=167 Identities=13% Similarity=0.018 Sum_probs=94.5
Q ss_pred ceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhh
Q 003363 273 PSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASEL 352 (826)
Q Consensus 273 ~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (826)
..|.++|+++|++..-. .+.. ......+++|+. |+...|. ...++++|.
T Consensus 75 g~v~~iD~~Tgkv~~~~-l~~~--~FgeGit~~g~~----Ly~ltw~--------------~~~v~V~D~---------- 123 (268)
T 3nok_A 75 GTLRQLSLESAQPVWME-RLGN--IFAEGLASDGER----LYQLTWT--------------EGLLFTWSG---------- 123 (268)
T ss_dssp TEEEECCSSCSSCSEEE-ECTT--CCEEEEEECSSC----EEEEESS--------------SCEEEEEET----------
T ss_pred CEEEEEECCCCcEEeEE-CCCC--cceeEEEEeCCE----EEEEEcc--------------CCEEEEEEC----------
Confidence 34999999999876541 2222 222335778888 8777653 337999998
Q ss_pred hhhcCCCCCCcc-eecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeee
Q 003363 353 ELKESSSEDLPV-VNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQ 431 (826)
Q Consensus 353 ~~~~~~~~~~~~-~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 431 (826)
++.+. .++... ......++||++|+ .++. ...|+.+|..+.+... -+++-.
T Consensus 124 -------~Tl~~~~ti~~~---~eGwGLt~Dg~~L~-vSdG----------s~~l~~iDp~T~~v~~-------~I~V~~ 175 (268)
T 3nok_A 124 -------MPPQRERTTRYS---GEGWGLCYWNGKLV-RSDG----------GTMLTFHEPDGFALVG-------AVQVKL 175 (268)
T ss_dssp -------TTTEEEEEEECS---SCCCCEEEETTEEE-EECS----------SSEEEEECTTTCCEEE-------EEECEE
T ss_pred -------CcCcEEEEEeCC---CceeEEecCCCEEE-EECC----------CCEEEEEcCCCCeEEE-------EEEeCC
Confidence 55443 344322 12345568998765 4432 3679999988755321 111111
Q ss_pred ccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCC--------------CCeeeEEEee
Q 003363 432 CAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAE--------------SNFSWSLLTL 497 (826)
Q Consensus 432 ~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~--------------~~~~~~~~s~ 497 (826)
.+ ..+ ..+..+.|. || .||+ ..+. ...|.+||+++|++.....-. ......++++
T Consensus 176 ~g--~~v-----~~lNeLe~~-dG-~lya-nvw~-s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 176 RG--QPV-----ELINELECA-NG-VIYA-NIWH-SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp TT--EEC-----CCEEEEEEE-TT-EEEE-EETT-CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred CC--ccc-----ccccccEEe-CC-EEEE-EECC-CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence 00 000 012345566 77 4664 3444 348999999999987543211 1223346677
Q ss_pred cCCEEEEEEeCC
Q 003363 498 DGDNIIAVSSSP 509 (826)
Q Consensus 498 dg~~l~~~~s~~ 509 (826)
+++.|+.+.-..
T Consensus 245 ~~~rlfVTGK~W 256 (268)
T 3nok_A 245 GSGRIFMTGKLW 256 (268)
T ss_dssp TTCCEEEEETTC
T ss_pred CCCEEEEeCCCC
Confidence 777766665444
No 494
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.21 E-value=0.044 Score=54.70 Aligned_cols=202 Identities=10% Similarity=0.162 Sum_probs=109.9
Q ss_pred cceeecCCCCeEEEEeecCCCCCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccC
Q 003363 211 EGISWNSDETLIAYVAEEPSPSKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKG 290 (826)
Q Consensus 211 ~~~~wSPDg~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~ 290 (826)
++++|.||+++|+.+.+.. +.|+.+|+++...+.+.
T Consensus 30 SGla~~~~~~~L~aV~d~~-------------------------------------------~~I~~ld~~g~v~~~i~- 65 (255)
T 3qqz_A 30 SSLTWSAQSNTLFSTINKP-------------------------------------------AAIVEMTTNGDLIRTIP- 65 (255)
T ss_dssp EEEEEETTTTEEEEEEETT-------------------------------------------EEEEEEETTCCEEEEEE-
T ss_pred ceeEEeCCCCEEEEEECCC-------------------------------------------CeEEEEeCCCCEEEEEe-
Confidence 8999999998888776542 67999999843334442
Q ss_pred CCCCCccceEEEeeCCCCCccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCc---ceec
Q 003363 291 IPKSLSVGQVVWAPLNEGLHQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLP---VVNL 367 (826)
Q Consensus 291 ~~~~~~~~~~~wSPDg~~~~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~L 367 (826)
..+......+++.++|+ ++.+. + +...|+.++++. .+. ....
T Consensus 66 l~g~~D~EGIa~~~~g~-----~~vs~-E-------------~~~~l~~~~v~~----------------~~~i~~~~~~ 110 (255)
T 3qqz_A 66 LDFVKDLETIEYIGDNQ-----FVISD-E-------------RDYAIYVISLTP----------------NSEVKILKKI 110 (255)
T ss_dssp CSSCSSEEEEEECSTTE-----EEEEE-T-------------TTTEEEEEEECT----------------TCCEEEEEEE
T ss_pred cCCCCChHHeEEeCCCE-----EEEEE-C-------------CCCcEEEEEcCC----------------CCeeeeeeee
Confidence 23334556778877665 44333 2 223577776631 111 1111
Q ss_pred ------CCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeC-CCCCCCCcccceeeeeeeeeccCCCCCcc
Q 003363 368 ------TESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDW-PTNGNFSSLEKIVDVIPVVQCAEGDCFPG 440 (826)
Q Consensus 368 ------t~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~f~g 440 (826)
...+......+|+|++++|+....+. ...||.++- .++. .++ +........ .
T Consensus 111 ~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~---------p~~i~~~~g~~~~~--~l~-----i~~~~~~~~-~---- 169 (255)
T 3qqz_A 111 KIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN---------PIEVYKVNGLLSSN--ELH-----ISKDKALQR-Q---- 169 (255)
T ss_dssp ECCCSSCCCSSCCEEEEEETTTTEEEEEEESS---------SEEEEEEESTTCSS--CCE-----EEECHHHHH-T----
T ss_pred ccccccccccCCcceEEEeCCCCEEEEEECcC---------CceEEEEcccccCC--cee-----eecchhhcc-c----
Confidence 12233457889999999887766553 246888871 0100 010 100000000 0
Q ss_pred cccCCCCCCccccCCCEEEEEEEeCCeEEEEEEECCCCcEEEecCCCC---------CeeeEEEeecCCEEEEEEeCCCC
Q 003363 441 LYSSSILSNPWLSDGCTMLLSSIWGSSQVIISVNVSSGELLRITPAES---------NFSWSLLTLDGDNIIAVSSSPVD 511 (826)
Q Consensus 441 ~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~vdl~tg~~~~lt~~~~---------~~~~~~~s~dg~~l~~~~s~~~~ 511 (826)
+.-..+..+++.|...++++.+. ....|..+|.++.-+..+.-..+ ......++++|+ +|.+ +.+
T Consensus 170 ~~~~d~S~l~~dp~tg~lliLS~--~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE~-- 243 (255)
T 3qqz_A 170 FTLDDVSGAEFNQQKNTLLVLSH--ESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SEP-- 243 (255)
T ss_dssp CCSSCCCEEEEETTTTEEEEEET--TTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ETT--
T ss_pred cccCCceeEEEcCCCCeEEEEEC--CCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cCC--
Confidence 00113456778887777887764 33567888886543333333221 234456777775 5544 333
Q ss_pred CCeEEEEe
Q 003363 512 VPQVKYGY 519 (826)
Q Consensus 512 p~~l~~~~ 519 (826)
..+|+..
T Consensus 244 -n~~y~f~ 250 (255)
T 3qqz_A 244 -NRFYRFT 250 (255)
T ss_dssp -TEEEEEE
T ss_pred -ceEEEEE
Confidence 4566654
No 495
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=97.13 E-value=0.0012 Score=69.07 Aligned_cols=96 Identities=11% Similarity=0.054 Sum_probs=61.3
Q ss_pred CCCcEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEECCCCCCCCchhhhhcCCCCCCcchHHHHHHHHHHHHHcCCCC
Q 003363 590 SCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDMGLAN 669 (826)
Q Consensus 590 ~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G~~Vl~~d~rG~~g~G~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d 669 (826)
+..+.|+++||.++. ...|..+...| ++.|+.+|+++.. + ...++++.+.+...++.. ..
T Consensus 44 ~~~~~l~~~hg~~g~--~~~~~~~~~~l---~~~v~~~~~~~~~----------~----~~~~~~~a~~~~~~i~~~-~~ 103 (316)
T 2px6_A 44 SSERPLFLVHPIEGS--TTVFHSLASRL---SIPTYGLQCTRAA----------P----LDSIHSLAAYYIDCIRQV-QP 103 (316)
T ss_dssp CSSCCEEEECCTTCC--SGGGHHHHHHC---SSCEEEECCCTTS----------C----TTCHHHHHHHHHHHHTTT-CS
T ss_pred CCCCeEEEECCCCCC--HHHHHHHHHhc---CCCEEEEECCCCC----------C----cCCHHHHHHHHHHHHHHh-CC
Confidence 345679999997654 45676666665 3899999998310 1 123555544443333331 12
Q ss_pred CCcEEEEEecchHHHHHHHHHhCC---Cc---eeEEEecCCc
Q 003363 670 PSKVTVVGGSHGGFLTTHLIGQAP---DK---FVAAAARNPL 705 (826)
Q Consensus 670 ~~rv~l~G~S~GG~~a~~~a~~~p---~~---~~a~v~~~p~ 705 (826)
..++.++|||+||.++..++.+.+ +. ++.+++.++.
T Consensus 104 ~~~~~l~G~S~Gg~va~~~a~~l~~~g~~~p~v~~l~li~~~ 145 (316)
T 2px6_A 104 EGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDGS 145 (316)
T ss_dssp SCCCEEEEETHHHHHHHHHHHHHHHHC---CCCCEEEEESCS
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHHcCCcccccceEEEEcCC
Confidence 367999999999999999887653 34 7777765553
No 496
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.01 E-value=0.16 Score=53.43 Aligned_cols=109 Identities=15% Similarity=0.011 Sum_probs=65.0
Q ss_pred CceEEEEEccCCceEeccCCC--CCCccceEEEeeCCCCCccEEEEEeec--Ccceeeee-e-eeccCCCceEEEEcccc
Q 003363 272 QPSLFVININSGEVQAVKGIP--KSLSVGQVVWAPLNEGLHQYLVFVGWS--SETRKLGI-K-YCYNRPCALYAVRVSLY 345 (826)
Q Consensus 272 ~~~l~v~d~~~g~~~~l~~~~--~~~~~~~~~wSPDg~~~~~~lvf~~~~--~~~~~~g~-~-~~~~~~~~l~~~d~~~~ 345 (826)
...||.+|.+++..+.+.... .-....++...+||+ ++++..- .++.. +. . +.......||++|.
T Consensus 140 ~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-----fyvt~~~~ftd~~~-~~~e~~~~~~~g~vyr~d~--- 210 (355)
T 3sre_A 140 TVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-----FYATNDHYFIDPYL-KSWEMHLGLAWSFVTYYSP--- 210 (355)
T ss_dssp EEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-----EEEEESCSCSSHHH-HHHHHHTTCCCEEEEEECT---
T ss_pred eEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-----EEecCCcEeCCccc-ccchhhccCCccEEEEEEC---
Confidence 356888887776655543111 123567889999998 5554321 11000 00 0 00012357888874
Q ss_pred cchhhhhhhhcCCCCCCcceecCCCCccccCceecCCCCEEEEEeccCCCCCCCCcccceEEEEeCCCCC
Q 003363 346 KSEASELELKESSSEDLPVVNLTESISSAFFPRFSPDGKFLVFLSAKSSVDSGAHSATDSLHRIDWPTNG 415 (826)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~Lt~~~~~~~~p~~SpDG~~l~f~s~~~~~~~g~~~~~~~l~~~d~~~~~ 415 (826)
++.+.+..+......++|||||++|++.... ..+|++++++.++
T Consensus 211 ----------------~~~~~~~~~l~~pNGia~spDg~~lYvadt~----------~~~I~~~~~~~~g 254 (355)
T 3sre_A 211 ----------------NDVRVVAEGFDFANGINISPDGKYVYIAELL----------AHKIHVYEKHANW 254 (355)
T ss_dssp ----------------TCCEEEEEEESSEEEEEECTTSSEEEEEEGG----------GTEEEEEEECTTS
T ss_pred ----------------CeEEEeecCCcccCcceECCCCCEEEEEeCC----------CCeEEEEEECCCC
Confidence 2455555555556789999999998877754 2679999987533
No 497
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.98 E-value=0.1 Score=53.12 Aligned_cols=231 Identities=10% Similarity=0.009 Sum_probs=119.8
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEecCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCCCCC
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELWSQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSPSKP 234 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~~~~ 234 (826)
.....+++|+|+ |++... +...++.++..++... ...+... . ...++.++|+|+ |++...
T Consensus 63 ~~~~i~~~~~g~-l~v~~~---~~~~v~~~d~~g~~~~-~~~~~~~-~------~~~~i~~~~~g~-l~v~~~------- 122 (300)
T 2qc5_A 63 KVMCLIVSSLGD-IWFTEN---GANKIGKLSKKGGFTE-YPLPQPD-S------GPYGITEGLNGD-IWFTQL------- 122 (300)
T ss_dssp CEEEEEECTTSC-EEEEET---TTTEEEEECTTSCEEE-EECSSTT-C------CEEEEEECSTTC-EEEEET-------
T ss_pred cceeEEECCCCC-EEEEec---CCCeEEEECCCCCeEE-ecCCCCC-C------CCccceECCCCC-EEEEcc-------
Confidence 467788899997 433322 1234666664454432 2222111 1 125788888886 444321
Q ss_pred CccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCceEeccCCCCCCccceEEEeeCCCCCccEEE
Q 003363 235 TFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEVQAVKGIPKSLSVGQVVWAPLNEGLHQYLV 314 (826)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~~~l~~~~~~~~~~~~~wSPDg~~~~~~lv 314 (826)
....|+++|.+ ++.+.+........+..+++.|||+ |+
T Consensus 123 ------------------------------------~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-----l~ 160 (300)
T 2qc5_A 123 ------------------------------------NGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-----LW 160 (300)
T ss_dssp ------------------------------------TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-----EE
T ss_pred ------------------------------------CCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-----EE
Confidence 12568888887 6665442111223566788899887 66
Q ss_pred EEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceec--CCCCccccCceecCCCCEEEEEecc
Q 003363 315 FVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNL--TESISSAFFPRFSPDGKFLVFLSAK 392 (826)
Q Consensus 315 f~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~L--t~~~~~~~~p~~SpDG~~l~f~s~~ 392 (826)
+... ....|+++|. . ++...+ ...........+++||+ |++....
T Consensus 161 v~~~--------------~~~~i~~~~~-----------------~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~ 207 (300)
T 2qc5_A 161 FTEN--------------QNNSIGRITN-----------------T-GKLEEYPLPTNAAAPVGITSGNDGA-LWFVEIM 207 (300)
T ss_dssp EEET--------------TTTEEEEECT-----------------T-CCEEEEECSSTTCCEEEEEECTTSS-EEEEETT
T ss_pred EEec--------------CCCeEEEECC-----------------C-CcEEEeeCCCCCCCcceEEECCCCC-EEEEccC
Confidence 5541 1236888875 2 222222 12223455677889986 4433322
Q ss_pred CCCCCCCCcccceEEEEeCCCCCCCCcccceeeeeeeeeccCCCCCcccccCCCCCCccccCCCEEEEEEEeCCeEEEEE
Q 003363 393 SSVDSGAHSATDSLHRIDWPTNGNFSSLEKIVDVIPVVQCAEGDCFPGLYSSSILSNPWLSDGCTMLLSSIWGSSQVIIS 472 (826)
Q Consensus 393 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~f~g~~~~~~~~~~ws~Dg~~l~~~~~~~~~~~l~~ 472 (826)
...|+++|. ++...... .+.. + ..+..+.++++|+ |+++. .+...|++
T Consensus 208 ----------~~~i~~~~~-~g~~~~~~-----------~~~~--~-----~~~~~i~~d~~g~-l~v~~--~~~~~i~~ 255 (300)
T 2qc5_A 208 ----------GNKIGRITT-TGEISEYD-----------IPTP--N-----ARPHAITAGKNSE-IWFTE--WGANQIGR 255 (300)
T ss_dssp ----------TTEEEEECT-TCCEEEEE-----------CSST--T-----CCEEEEEECSTTC-EEEEE--TTTTEEEE
T ss_pred ----------CCEEEEEcC-CCcEEEEE-----------CCCC--C-----CCceEEEECCCCC-EEEec--cCCCeEEE
Confidence 246888986 32221110 0000 0 0123566788987 66654 23456888
Q ss_pred EECCCCcEEEecCC--CCCeeeEEEeecCCEEEEEEeCCCCCCeEEEEe
Q 003363 473 VNVSSGELLRITPA--ESNFSWSLLTLDGDNIIAVSSSPVDVPQVKYGY 519 (826)
Q Consensus 473 vdl~tg~~~~lt~~--~~~~~~~~~s~dg~~l~~~~s~~~~p~~l~~~~ 519 (826)
+|. +++...+... ........++++|+ +++.. . . .|+.++
T Consensus 256 ~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~-~--~--~i~~~~ 297 (300)
T 2qc5_A 256 ITN-DNTIQEYQLQTENAEPHGITFGKDGS-VWFAL-K--C--KIGKLN 297 (300)
T ss_dssp ECT-TSCEEEEECCSTTCCCCCEEECTTSC-EEEEC-S--S--EEEEEE
T ss_pred ECC-CCcEEEEECCccCCccceeEeCCCCC-EEEEc-c--C--ceEEeC
Confidence 888 5676655332 12223334555654 44332 2 1 566555
No 498
>4az3_A Lysosomal protective protein 32 kDa chain; hydrolase, drug discovery, carboxypeptidase, cardiovascular; HET: NAG S35; 2.04A {Homo sapiens} PDB: 4az0_A*
Probab=96.93 E-value=0.0093 Score=60.60 Aligned_cols=129 Identities=21% Similarity=0.267 Sum_probs=79.2
Q ss_pred CCeeEEEEEEecCCCCCCCCCcEEEEEcCCCCCCCCccchHHHHHHHHCC---------------------cEEEEECCC
Q 003363 572 AQKPFEAIFVSSSHKKDCSCDPLIVVLHGGPHSVSLSSYSKSLAFLSSVG---------------------YSLLIVNYR 630 (826)
Q Consensus 572 ~g~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~la~~G---------------------~~Vl~~d~r 630 (826)
.+..+..|++...+ .....|+||++-|||+.... ...|.+.| ..++-+|.+
T Consensus 32 ~~~~lFywf~es~~--~p~~~Pl~lWlnGGPGcSS~------~g~~~E~GP~~~~~~~~~l~~N~~sW~~~an~lfiD~P 103 (300)
T 4az3_A 32 GSKHLHYWFVESQK--DPENSPVVLWLNGGPGCSSL------DGLLTEHGPFLVQPDGVTLEYNPYSWNLIANVLYLESP 103 (300)
T ss_dssp TTEEEEEEEECCSS--CTTTSCEEEEECCTTTBCTH------HHHHHTTSSEEECTTSSCEEECTTCGGGSSEEEEECCS
T ss_pred CCCeEEEEEEEcCC--CCCCCCEEEEECCCCcHHHH------HHHHhcCCCceecCCCccccccCccHHhhhcchhhcCC
Confidence 35678888886543 34568999999999987431 12222222 467778866
Q ss_pred CCCCCchhhhhcCCCCCCcchHHHHHHHHH-HHHHcCCCCCCcEEEEEecchHHHHHHHHHh---CC-CceeEEEecCCc
Q 003363 631 GSLGFGEEALQSLPGKVGSQDVNDVLTAID-HVIDMGLANPSKVTVVGGSHGGFLTTHLIGQ---AP-DKFVAAAARNPL 705 (826)
Q Consensus 631 G~~g~G~~~~~~~~~~~~~~~~~D~~~~i~-~l~~~~~~d~~rv~l~G~S~GG~~a~~~a~~---~p-~~~~a~v~~~p~ 705 (826)
-..||........ .........|+..+++ |+...+.....++.|.|.|+||..+-.+|.. .+ -.++++++.+|+
T Consensus 104 vGtGfSy~~~~~~-~~~~~~~a~d~~~fl~~f~~~fp~~~~~~~yi~GESY~G~yvP~~a~~i~~~~~inLkG~~iGNg~ 182 (300)
T 4az3_A 104 AGVGFSYSDDKFY-ATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLAVGNGL 182 (300)
T ss_dssp TTSTTCEETTCCC-CCBHHHHHHHHHHHHHHHHHHCGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEEEESCC
T ss_pred CcccccccCCCcc-cccchhhHHHHHHHHHHHHHhChhhcCCceEEEecCCceeeHHHHHHHHHhCCCcccccceecCCc
Confidence 4455543321110 0111112455555554 3333444556789999999999998777653 22 258999999999
Q ss_pred cchh
Q 003363 706 CNLA 709 (826)
Q Consensus 706 ~~~~ 709 (826)
++..
T Consensus 183 ~d~~ 186 (300)
T 4az3_A 183 SSYE 186 (300)
T ss_dssp SBHH
T ss_pred cCHH
Confidence 8764
No 499
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.89 E-value=0.25 Score=50.85 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=23.7
Q ss_pred ccEEEEeCCCCCeEEEEecCCCCCCeEEEEe-cCCceeEEEec
Q 003363 155 GASAVVPSPSGSKLLVVRNPENESPIQFELW-SQSQLEKEFHV 196 (826)
Q Consensus 155 ~~~~~~~SPdG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~ 196 (826)
.....+++|||+ |+ +.+......+++.+. .+++...+...
T Consensus 73 ~p~gia~~~dG~-l~-vad~~~~~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 73 KVSGLAFTSNGD-LV-ATGWNADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp EEEEEEECTTSC-EE-EEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CceeEEEcCCCc-EE-EEeccCCcceEEEEcCCCCeEEEEEeC
Confidence 456788999998 43 433221233577766 56666655544
No 500
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.84 E-value=0.017 Score=63.07 Aligned_cols=159 Identities=15% Similarity=0.264 Sum_probs=92.7
Q ss_pred cccEEEEeCC-CCCeEEEEecCCCCCCeEEEEe-cCCceeEEEecCCCccccccCCCcccceeecCCCCeEEEEeecCCC
Q 003363 154 TGASAVVPSP-SGSKLLVVRNPENESPIQFELW-SQSQLEKEFHVPQTVHGSVYADGWFEGISWNSDETLIAYVAEEPSP 231 (826)
Q Consensus 154 ~~~~~~~~SP-dG~~la~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~g~v~~~~~~~~~~wSPDg~~ia~~~~~~~~ 231 (826)
.....++++| ++..|+++... ..+..+. .++....+....... .+++|++||++|+.......
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~----~~I~~id~~~~~v~~~~~~~~~P----------~~ia~d~~G~~lyvad~~~~- 201 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQ----HPTRLIDFEKEYVSTVYSGLSKV----------RTICWTHEADSMIITNDQNN- 201 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBT----EEEEEEETTTTEEEEEECCCSCE----------EEEEECTTSSEEEEEECCSC-
T ss_pred CCCCEEEECCCCCCeEEEEeCC----CcEEEEECCCCEEEEEecCCCCc----------ceEEEeCCCCEEEEEeCCCC-
Confidence 3567889999 56666555432 4566777 344444444322222 58999999997665432110
Q ss_pred CCCCccCCCCCCCCCCccCCCCCCcceeecCCCccCCCccCceEEEEEccCCce--EeccCCCCCCccceEEEeeCCCCC
Q 003363 232 SKPTFSLGSTKGGSSDKDCNSWKGQGDWEEDWGETYAGKRQPSLFVININSGEV--QAVKGIPKSLSVGQVVWAPLNEGL 309 (826)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~l~v~d~~~g~~--~~l~~~~~~~~~~~~~wSPDg~~~ 309 (826)
.....+++++.+++-. +.+ ........++++|++..
T Consensus 202 --------------------------------------~~~~~v~~~~~~g~~~~~~~l---~~~~~p~giavdp~~g~- 239 (430)
T 3tc9_A 202 --------------------------------------NDRPNNYILTRESGFKVITEL---TKGQNCNGAETHPINGE- 239 (430)
T ss_dssp --------------------------------------TTSEEEEEEEGGGTSCSEEEE---EECSSCCCEEECTTTCC-
T ss_pred --------------------------------------cccceEEEEeCCCceeeeeee---ccCCCceEEEEeCCCCE-
Confidence 0123466666544322 222 11224567889996665
Q ss_pred ccEEEEEeecCcceeeeeeeeccCCCceEEEEcccccchhhhhhhhcCCCCCCcceecCC--CCccccCceecCCCCEEE
Q 003363 310 HQYLVFVGWSSETRKLGIKYCYNRPCALYAVRVSLYKSEASELELKESSSEDLPVVNLTE--SISSAFFPRFSPDGKFLV 387 (826)
Q Consensus 310 ~~~lvf~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Lt~--~~~~~~~p~~SpDG~~l~ 387 (826)
|+++.+ ....|++++. +++....+.. ........+|+|||++|+
T Consensus 240 ---lyv~d~--------------~~~~V~~~~~-----------------~~~~~~~~~~~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 240 ---LYFNSW--------------NAGQVFRYDF-----------------TTQETTPLFTIQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp ---EEEEET--------------TTTEEEEEET-----------------TTTEEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred ---EEEEEC--------------CCCEEEEEEC-----------------CCCcEEEEEEcCCCCcceeEEEcCCCCEEE
Confidence 877652 2237999997 5554423321 122355689999999887
Q ss_pred EEeccCCCCCCCCcccceEEEEeCCC
Q 003363 388 FLSAKSSVDSGAHSATDSLHRIDWPT 413 (826)
Q Consensus 388 f~s~~~~~~~g~~~~~~~l~~~d~~~ 413 (826)
+.... ...|++++.+.
T Consensus 286 v~d~~----------~~~I~~~~~d~ 301 (430)
T 3tc9_A 286 IVVVN----------QHYILRSDYDW 301 (430)
T ss_dssp EEETT----------TTEEEEEEEET
T ss_pred EEECC----------CCEEEEEeCCc
Confidence 66543 25788887664
Done!