Query 003364
Match_columns 826
No_of_seqs 332 out of 2503
Neff 9.6
Searched_HMMs 46136
Date Thu Mar 28 22:06:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003364.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003364hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03190 aminophospholipid tra 100.0 3E-125 7E-130 1127.3 78.2 816 2-826 70-953 (1178)
2 TIGR01652 ATPase-Plipid phosph 100.0 5E-121 1E-125 1106.8 78.2 803 17-826 1-850 (1057)
3 KOG0206 P-type ATPase [General 100.0 6E-117 1E-121 1015.1 59.2 812 2-825 14-875 (1151)
4 KOG0210 P-type ATPase [Inorgan 100.0 1E-108 3E-113 861.9 51.3 767 12-824 74-861 (1051)
5 COG0474 MgtA Cation transport 100.0 1.1E-98 2E-103 890.1 43.4 650 11-825 51-720 (917)
6 KOG0202 Ca2+ transporting ATPa 100.0 1.6E-98 4E-103 808.8 36.0 684 11-822 30-756 (972)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 1.9E-95 4E-100 870.1 51.9 690 9-825 31-827 (1053)
8 TIGR01657 P-ATPase-V P-type AT 100.0 3.4E-93 7.4E-98 860.5 55.3 694 11-823 146-878 (1054)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1.1E-93 2.3E-98 859.0 48.3 691 8-825 40-765 (997)
10 KOG0204 Calcium transporting A 100.0 3.4E-94 7.4E-99 774.0 36.6 657 11-823 126-818 (1034)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 2.9E-92 6.3E-97 845.0 45.6 653 10-825 66-750 (941)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2.3E-90 5.1E-95 825.1 51.0 669 37-825 1-711 (917)
13 TIGR01522 ATPase-IIA2_Ca golgi 100.0 5.5E-89 1.2E-93 811.8 51.5 641 10-824 30-698 (884)
14 PRK10517 magnesium-transportin 100.0 2.3E-89 5.1E-94 807.8 46.1 620 9-824 72-717 (902)
15 PRK15122 magnesium-transportin 100.0 2.1E-88 4.6E-93 801.2 46.6 635 9-822 50-715 (903)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 3.6E-88 7.8E-93 799.1 47.9 618 10-823 39-681 (867)
17 TIGR01647 ATPase-IIIA_H plasma 100.0 4.2E-88 9.2E-93 788.8 47.0 595 10-822 7-612 (755)
18 KOG0208 Cation transport ATPas 100.0 2.3E-86 5E-91 723.7 45.0 704 11-818 167-924 (1140)
19 KOG0203 Na+/K+ ATPase, alpha s 100.0 2.4E-80 5.2E-85 666.3 20.3 687 7-819 61-781 (1019)
20 PRK14010 potassium-transportin 100.0 6E-75 1.3E-79 653.3 44.5 535 38-824 27-583 (673)
21 PRK01122 potassium-transportin 100.0 9.9E-74 2.1E-78 644.1 46.1 535 37-820 27-583 (679)
22 KOG0209 P-type ATPase [Inorgan 100.0 8.3E-74 1.8E-78 611.2 26.4 625 16-772 175-834 (1160)
23 TIGR01497 kdpB K+-transporting 100.0 5.4E-71 1.2E-75 620.1 44.3 539 37-823 26-587 (675)
24 KOG0205 Plasma membrane H+-tra 100.0 2.5E-68 5.3E-73 556.3 22.8 605 8-819 40-659 (942)
25 COG2217 ZntA Cation transport 100.0 6.1E-66 1.3E-70 580.1 37.8 489 75-824 179-679 (713)
26 TIGR01494 ATPase_P-type ATPase 100.0 4E-64 8.7E-69 567.9 41.2 465 78-825 7-482 (499)
27 PRK11033 zntA zinc/cadmium/mer 100.0 1.1E-63 2.3E-68 581.5 41.5 476 80-824 219-708 (741)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 5.4E-62 1.2E-66 555.1 41.2 496 72-825 23-528 (556)
29 KOG0207 Cation transport ATPas 100.0 2.7E-62 5.9E-67 536.0 34.9 481 95-821 372-862 (951)
30 TIGR01512 ATPase-IB2_Cd heavy 100.0 3.5E-61 7.7E-66 544.5 40.3 475 72-825 23-507 (536)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 9.1E-60 2E-64 534.4 38.7 456 95-824 85-546 (562)
32 PRK10671 copA copper exporting 100.0 1.3E-58 2.8E-63 550.9 43.4 485 79-823 295-791 (834)
33 COG2216 KdpB High-affinity K+ 100.0 5E-50 1.1E-54 410.3 27.5 461 80-785 79-549 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 5.1E-30 1.1E-34 261.1 15.0 222 73-371 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 8.9E-22 1.9E-26 198.8 12.4 98 600-764 114-215 (215)
36 COG0561 Cof Predicted hydrolas 99.6 6.4E-16 1.4E-20 160.8 11.3 182 606-788 12-248 (264)
37 PRK10513 sugar phosphate phosp 99.6 1.1E-15 2.5E-20 159.7 11.3 183 601-788 11-255 (270)
38 PRK10976 putative hydrolase; P 99.6 1.6E-15 3.4E-20 158.2 12.3 184 601-788 10-251 (266)
39 PRK15126 thiamin pyrimidine py 99.6 4.8E-15 1.1E-19 154.9 15.0 184 601-788 10-249 (272)
40 PRK01158 phosphoglycolate phos 99.6 4.2E-14 9E-19 144.2 15.2 173 613-788 20-216 (230)
41 COG4087 Soluble P-type ATPase 99.5 3.8E-14 8.2E-19 120.2 10.5 127 601-795 18-146 (152)
42 PLN02887 hydrolase family prot 99.5 2E-14 4.3E-19 161.1 11.1 185 600-788 315-566 (580)
43 PF08282 Hydrolase_3: haloacid 99.5 9.4E-14 2E-18 144.0 14.8 178 611-789 13-246 (254)
44 TIGR01482 SPP-subfamily Sucros 99.5 2.5E-13 5.4E-18 138.0 15.2 174 613-788 15-208 (225)
45 PRK10530 pyridoxal phosphate ( 99.5 3.6E-13 7.8E-18 141.2 16.4 183 601-788 11-258 (272)
46 TIGR01487 SPP-like sucrose-pho 99.5 3.6E-13 7.8E-18 135.4 14.8 173 612-788 17-206 (215)
47 PRK03669 mannosyl-3-phosphogly 99.5 4.5E-13 9.7E-18 139.6 14.9 180 601-787 15-254 (271)
48 PF13246 Hydrolase_like2: Puta 99.4 7.4E-14 1.6E-18 117.6 5.1 89 435-535 1-89 (91)
49 TIGR00099 Cof-subfamily Cof su 99.4 5.9E-13 1.3E-17 137.9 10.9 176 612-788 15-247 (256)
50 TIGR01486 HAD-SF-IIB-MPGP mann 99.4 6.1E-12 1.3E-16 130.1 15.4 171 614-788 17-243 (256)
51 PRK00192 mannosyl-3-phosphogly 99.3 5.3E-11 1.2E-15 124.2 14.2 178 601-785 12-252 (273)
52 TIGR01485 SPP_plant-cyano sucr 99.2 1E-10 2.2E-15 120.3 14.0 171 611-782 19-221 (249)
53 PLN02382 probable sucrose-phos 99.2 4.2E-10 9E-15 122.9 15.2 168 613-781 28-231 (413)
54 TIGR02471 sucr_syn_bact_C sucr 99.2 4E-10 8.6E-15 115.1 13.8 167 620-788 22-222 (236)
55 PTZ00174 phosphomannomutase; P 99.1 7.7E-10 1.7E-14 113.4 13.6 172 613-785 22-245 (247)
56 TIGR02726 phenyl_P_delta pheny 99.1 3.2E-10 6.8E-15 107.3 9.2 98 620-787 41-140 (169)
57 TIGR02463 MPGP_rel mannosyl-3- 99.0 3.5E-09 7.7E-14 107.0 14.8 153 614-769 17-220 (221)
58 PRK14502 bifunctional mannosyl 99.0 5.3E-09 1.2E-13 116.9 15.9 157 613-772 433-659 (694)
59 PRK11133 serB phosphoserine ph 99.0 1.1E-09 2.3E-14 115.3 9.4 127 613-795 181-312 (322)
60 TIGR02461 osmo_MPG_phos mannos 99.0 1.2E-08 2.6E-13 102.6 15.7 156 611-769 13-224 (225)
61 TIGR01670 YrbI-phosphatas 3-de 99.0 2.2E-09 4.9E-14 101.0 9.4 96 621-788 36-135 (154)
62 PRK10187 trehalose-6-phosphate 99.0 4.3E-09 9.3E-14 108.6 12.1 175 613-793 36-238 (266)
63 TIGR02137 HSK-PSP phosphoserin 98.9 6.3E-09 1.4E-13 102.4 11.0 124 613-793 68-193 (203)
64 COG0560 SerB Phosphoserine pho 98.9 5.3E-09 1.2E-13 103.4 10.2 120 612-787 76-201 (212)
65 COG1778 Low specificity phosph 98.8 5.2E-09 1.1E-13 92.9 6.1 95 620-786 42-140 (170)
66 PRK09484 3-deoxy-D-manno-octul 98.8 9.2E-09 2E-13 100.0 8.3 110 620-801 55-175 (183)
67 KOG4383 Uncharacterized conser 98.8 2.6E-07 5.7E-12 99.5 19.7 230 596-826 809-1106(1354)
68 TIGR01484 HAD-SF-IIB HAD-super 98.8 2E-08 4.3E-13 100.2 8.3 157 613-769 17-204 (204)
69 PRK12702 mannosyl-3-phosphogly 98.7 3.4E-07 7.4E-12 92.4 15.3 45 611-655 16-60 (302)
70 TIGR00338 serB phosphoserine p 98.6 2.7E-07 5.9E-12 93.1 10.2 120 613-787 85-209 (219)
71 PRK14501 putative bifunctional 98.5 1.2E-06 2.6E-11 104.2 16.0 189 600-793 499-718 (726)
72 KOG1615 Phosphoserine phosphat 98.5 3.4E-07 7.4E-12 84.3 7.1 123 613-789 88-219 (227)
73 PLN02423 phosphomannomutase 98.5 2.2E-06 4.8E-11 87.5 13.4 157 612-771 23-232 (245)
74 PRK13582 thrH phosphoserine ph 98.4 8.5E-07 1.8E-11 88.5 9.9 124 613-793 68-193 (205)
75 PF05116 S6PP: Sucrose-6F-phos 98.4 1.2E-06 2.5E-11 89.6 9.8 154 622-776 28-212 (247)
76 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 1.8E-06 3.9E-11 85.8 10.5 105 613-769 80-188 (201)
77 PF12710 HAD: haloacid dehalog 98.2 4.6E-06 9.9E-11 82.2 9.5 92 616-761 92-192 (192)
78 PLN02954 phosphoserine phospha 98.2 6.2E-06 1.3E-10 83.5 10.4 128 613-793 84-221 (224)
79 PRK09552 mtnX 2-hydroxy-3-keto 98.1 1E-05 2.2E-10 81.5 9.7 132 613-793 74-210 (219)
80 TIGR03333 salvage_mtnX 2-hydro 98.1 1.3E-05 2.8E-10 80.4 10.0 111 612-769 69-181 (214)
81 PLN02580 trehalose-phosphatase 98.1 5.2E-05 1.1E-09 80.8 14.9 189 601-794 127-372 (384)
82 COG0546 Gph Predicted phosphat 98.1 9E-06 1.9E-10 81.8 8.1 126 611-794 87-216 (220)
83 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 1.7E-05 3.7E-10 78.8 8.7 107 611-769 85-196 (202)
84 TIGR00685 T6PP trehalose-phosp 98.0 2.6E-05 5.6E-10 79.9 10.1 70 722-794 155-238 (244)
85 TIGR01488 HAD-SF-IB Haloacid D 98.0 1.6E-05 3.4E-10 77.3 7.9 40 614-653 74-113 (177)
86 TIGR01449 PGP_bact 2-phosphogl 98.0 2.7E-05 5.9E-10 78.1 9.3 117 613-793 85-211 (213)
87 PRK13222 phosphoglycolate phos 98.0 2.3E-05 5E-10 79.5 8.8 123 612-794 92-220 (226)
88 TIGR01454 AHBA_synth_RP 3-amin 98.0 1.9E-05 4.2E-10 78.7 8.1 122 613-793 75-201 (205)
89 cd01427 HAD_like Haloacid deha 98.0 1.9E-05 4.1E-10 72.7 7.3 43 611-653 22-64 (139)
90 TIGR01489 DKMTPPase-SF 2,3-dik 97.9 3.7E-05 8E-10 75.4 8.9 113 612-768 71-186 (188)
91 PRK13223 phosphoglycolate phos 97.9 4.5E-05 9.8E-10 79.3 9.5 119 612-794 100-228 (272)
92 PRK10826 2-deoxyglucose-6-phos 97.9 4.9E-05 1.1E-09 76.8 9.2 123 612-793 91-217 (222)
93 PRK13288 pyrophosphatase PpaX; 97.9 5.2E-05 1.1E-09 76.1 9.3 123 613-793 82-208 (214)
94 PLN02205 alpha,alpha-trehalose 97.8 0.00025 5.3E-09 84.6 14.2 188 601-793 604-839 (854)
95 PLN03243 haloacid dehalogenase 97.7 0.00015 3.2E-09 74.7 9.2 122 613-793 109-232 (260)
96 PRK13226 phosphoglycolate phos 97.7 0.00018 4E-09 72.9 9.9 124 613-794 95-223 (229)
97 TIGR01422 phosphonatase phosph 97.7 0.00021 4.5E-09 73.8 10.1 124 613-794 99-251 (253)
98 PRK08238 hypothetical protein; 97.7 0.00025 5.3E-09 79.1 10.9 92 613-769 72-164 (479)
99 TIGR01545 YfhB_g-proteo haloac 97.6 0.00037 8.1E-09 69.2 10.8 105 613-769 94-200 (210)
100 PRK13225 phosphoglycolate phos 97.6 0.0003 6.4E-09 72.9 10.2 116 613-793 142-265 (273)
101 PRK11590 hypothetical protein; 97.6 0.00043 9.2E-09 69.2 10.5 105 613-769 95-201 (211)
102 PLN03017 trehalose-phosphatase 97.6 0.0017 3.8E-08 68.7 15.3 190 600-794 118-354 (366)
103 TIGR03351 PhnX-like phosphonat 97.6 0.00033 7.1E-09 70.7 9.8 123 612-793 86-217 (220)
104 smart00775 LNS2 LNS2 domain. T 97.5 0.00055 1.2E-08 64.4 9.6 39 611-649 25-66 (157)
105 PLN02770 haloacid dehalogenase 97.5 0.00047 1E-08 70.8 10.1 114 613-790 108-230 (248)
106 PRK13478 phosphonoacetaldehyde 97.5 0.00053 1.2E-08 71.3 10.0 41 613-653 101-141 (267)
107 smart00831 Cation_ATPase_N Cat 97.5 5.5E-05 1.2E-09 59.2 1.8 47 9-59 15-62 (64)
108 PRK11587 putative phosphatase; 97.5 0.00056 1.2E-08 68.8 9.5 120 613-792 83-204 (218)
109 PRK06769 hypothetical protein; 97.4 0.00059 1.3E-08 65.6 8.9 60 734-793 100-169 (173)
110 PLN02575 haloacid dehalogenase 97.4 0.00065 1.4E-08 72.7 10.0 117 613-793 216-339 (381)
111 PRK14988 GMP/IMP nucleotidase; 97.3 0.0011 2.4E-08 66.9 9.0 90 613-766 93-188 (224)
112 PF00690 Cation_ATPase_N: Cati 97.2 7E-05 1.5E-09 59.6 0.0 43 10-56 26-69 (69)
113 TIGR02253 CTE7 HAD superfamily 97.2 0.0012 2.7E-08 66.5 9.2 97 613-769 94-194 (221)
114 TIGR01662 HAD-SF-IIIA HAD-supe 97.1 0.0033 7.1E-08 57.5 9.6 40 613-652 25-72 (132)
115 TIGR01548 HAD-SF-IA-hyp1 haloa 97.1 0.0013 2.9E-08 64.9 7.4 42 612-653 105-146 (197)
116 PRK11009 aphA acid phosphatase 97.1 0.0023 5.1E-08 64.2 8.9 40 613-652 114-157 (237)
117 COG4359 Uncharacterized conser 97.1 0.0017 3.8E-08 59.8 7.0 104 613-769 73-184 (220)
118 TIGR01428 HAD_type_II 2-haloal 97.0 0.0023 4.9E-08 63.3 8.6 95 613-767 92-188 (198)
119 PLN02779 haloacid dehalogenase 97.0 0.0028 6.2E-08 66.3 9.0 123 613-793 144-270 (286)
120 TIGR01672 AphA HAD superfamily 97.0 0.0017 3.6E-08 65.3 6.9 39 615-653 116-158 (237)
121 PRK06698 bifunctional 5'-methy 97.0 0.0021 4.5E-08 72.5 8.5 121 613-794 330-452 (459)
122 TIGR01544 HAD-SF-IE haloacid d 97.0 0.0034 7.3E-08 64.1 8.9 44 613-656 121-164 (277)
123 PHA02530 pseT polynucleotide k 97.0 0.0022 4.8E-08 68.1 8.0 102 610-768 184-293 (300)
124 TIGR01685 MDP-1 magnesium-depe 96.9 0.0048 1E-07 58.8 9.3 54 600-653 32-86 (174)
125 COG3769 Predicted hydrolase (H 96.9 0.016 3.5E-07 55.3 12.4 39 615-653 25-63 (274)
126 PLN02940 riboflavin kinase 96.9 0.003 6.5E-08 69.0 8.6 115 613-791 93-216 (382)
127 PRK08942 D,D-heptose 1,7-bisph 96.9 0.0061 1.3E-07 59.2 9.7 61 734-794 110-175 (181)
128 PF13419 HAD_2: Haloacid dehal 96.8 0.0029 6.3E-08 60.8 7.0 93 611-767 75-173 (176)
129 PRK09449 dUMP phosphatase; Pro 96.8 0.0052 1.1E-07 62.1 8.7 116 613-793 95-220 (224)
130 TIGR02009 PGMB-YQAB-SF beta-ph 96.7 0.0042 9E-08 60.6 7.3 40 612-653 87-126 (185)
131 TIGR01509 HAD-SF-IA-v3 haloaci 96.6 0.0086 1.9E-07 58.2 8.6 89 613-766 85-179 (183)
132 PLN02811 hydrolase 96.5 0.0084 1.8E-07 60.3 8.4 59 734-792 144-207 (220)
133 TIGR01457 HAD-SF-IIA-hyp2 HAD- 96.5 0.048 1E-06 55.9 14.0 50 606-655 10-62 (249)
134 TIGR01990 bPGM beta-phosphoglu 96.5 0.0039 8.5E-08 60.8 5.5 39 613-653 87-125 (185)
135 TIGR01261 hisB_Nterm histidino 96.5 0.01 2.2E-07 56.1 7.8 35 735-769 111-145 (161)
136 TIGR00213 GmhB_yaeD D,D-heptos 96.4 0.014 3.1E-07 56.3 8.7 57 735-791 114-174 (176)
137 PLN02151 trehalose-phosphatase 96.4 0.03 6.6E-07 59.3 11.6 188 601-794 106-340 (354)
138 TIGR01668 YqeG_hyp_ppase HAD s 96.4 0.011 2.3E-07 56.7 7.7 40 613-652 43-83 (170)
139 TIGR02254 YjjG/YfnB HAD superf 96.4 0.0076 1.6E-07 60.8 7.0 120 613-793 97-222 (224)
140 TIGR01656 Histidinol-ppas hist 96.4 0.019 4.2E-07 53.5 9.1 27 613-639 27-53 (147)
141 smart00577 CPDc catalytic doma 96.3 0.0082 1.8E-07 56.1 6.1 40 612-652 44-83 (148)
142 TIGR02252 DREG-2 REG-2-like, H 96.2 0.017 3.7E-07 57.3 8.3 39 613-652 105-143 (203)
143 TIGR01681 HAD-SF-IIIC HAD-supe 96.1 0.014 2.9E-07 53.0 6.1 39 613-651 29-68 (128)
144 TIGR01549 HAD-SF-IA-v1 haloaci 96.0 0.015 3.2E-07 54.7 6.3 38 613-650 64-101 (154)
145 TIGR01533 lipo_e_P4 5'-nucleot 95.9 0.045 9.7E-07 56.0 9.9 42 612-653 117-161 (266)
146 PRK10444 UMP phosphatase; Prov 95.8 0.15 3.2E-06 52.1 13.1 45 606-650 10-54 (248)
147 TIGR01691 enolase-ppase 2,3-di 95.7 0.036 7.7E-07 55.3 7.8 100 610-769 92-194 (220)
148 TIGR01664 DNA-3'-Pase DNA 3'-p 95.7 0.045 9.7E-07 52.1 8.1 38 615-652 44-93 (166)
149 PLN02919 haloacid dehalogenase 95.6 0.058 1.3E-06 66.8 10.7 118 614-791 162-285 (1057)
150 TIGR01675 plant-AP plant acid 95.4 0.083 1.8E-06 52.5 9.1 41 613-653 120-163 (229)
151 COG2179 Predicted hydrolase of 95.3 0.059 1.3E-06 49.5 6.9 85 613-766 46-133 (175)
152 COG4030 Uncharacterized protei 95.3 0.081 1.8E-06 50.7 8.0 156 613-785 83-249 (315)
153 PF06888 Put_Phosphatase: Puta 95.1 0.047 1E-06 54.5 6.4 42 613-654 71-114 (234)
154 TIGR02247 HAD-1A3-hyp Epoxide 94.9 0.054 1.2E-06 54.1 6.4 33 735-767 160-192 (211)
155 PRK09456 ?-D-glucose-1-phospha 94.8 0.097 2.1E-06 51.6 7.9 35 735-769 149-183 (199)
156 TIGR01686 FkbH FkbH-like domai 94.7 0.094 2E-06 56.0 8.0 90 613-769 31-128 (320)
157 PRK10563 6-phosphogluconate ph 94.7 0.031 6.8E-07 56.2 4.1 115 613-793 88-210 (221)
158 PF02358 Trehalose_PPase: Treh 94.6 0.2 4.4E-06 50.8 9.8 171 613-785 19-231 (235)
159 PRK05446 imidazole glycerol-ph 94.6 0.12 2.7E-06 55.2 8.4 27 612-638 29-55 (354)
160 KOG3120 Predicted haloacid deh 94.4 0.27 5.8E-06 47.3 9.1 40 613-652 84-124 (256)
161 PLN02177 glycerol-3-phosphate 94.4 0.42 9.1E-06 53.7 12.4 70 732-809 176-245 (497)
162 PLN02645 phosphoglycolate phos 94.0 0.2 4.3E-06 53.2 8.4 47 606-652 37-86 (311)
163 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.0 0.11 2.4E-06 53.0 6.3 48 606-653 17-66 (242)
164 PRK10725 fructose-1-P/6-phosph 93.4 0.19 4.1E-06 49.0 6.5 90 618-767 92-182 (188)
165 COG1877 OtsB Trehalose-6-phosp 92.9 1.1 2.4E-05 45.8 11.3 192 601-793 26-250 (266)
166 TIGR01993 Pyr-5-nucltdase pyri 92.7 0.24 5.2E-06 48.1 6.1 93 613-767 84-181 (184)
167 PHA02597 30.2 hypothetical pro 92.5 0.45 9.8E-06 46.7 7.9 39 613-652 74-112 (197)
168 COG0637 Predicted phosphatase/ 92.3 0.28 6.1E-06 49.2 6.2 97 613-767 86-182 (221)
169 PF03767 Acid_phosphat_B: HAD 91.3 0.48 1E-05 47.7 6.5 40 613-652 115-157 (229)
170 PF09419 PGP_phosphatase: Mito 91.3 0.79 1.7E-05 43.2 7.5 91 611-769 57-163 (168)
171 PF08235 LNS2: LNS2 (Lipin/Ned 90.3 2.2 4.7E-05 39.7 9.2 34 612-645 26-59 (157)
172 PLN03063 alpha,alpha-trehalose 90.0 4.2 9.2E-05 49.1 14.0 150 614-764 533-721 (797)
173 TIGR01458 HAD-SF-IIA-hyp3 HAD- 89.8 0.52 1.1E-05 48.6 5.4 48 606-653 10-64 (257)
174 TIGR01689 EcbF-BcbF capsule bi 89.3 0.36 7.9E-06 43.2 3.3 33 612-644 23-55 (126)
175 PLN03064 alpha,alpha-trehalose 88.7 7.9 0.00017 47.0 14.8 150 614-764 623-811 (934)
176 PF13344 Hydrolase_6: Haloacid 88.5 0.44 9.4E-06 41.0 3.1 48 606-653 7-57 (101)
177 TIGR01684 viral_ppase viral ph 88.4 0.73 1.6E-05 47.3 5.1 42 614-655 146-188 (301)
178 COG0647 NagD Predicted sugar p 88.3 3.1 6.8E-05 42.6 9.6 46 605-650 16-61 (269)
179 PRK10748 flavin mononucleotide 88.2 1.2 2.5E-05 45.4 6.6 35 735-769 171-206 (238)
180 PF13242 Hydrolase_like: HAD-h 87.1 0.69 1.5E-05 37.2 3.4 56 735-790 12-74 (75)
181 TIGR01452 PGP_euk phosphoglyco 87.1 3 6.5E-05 43.5 9.1 48 606-653 11-61 (279)
182 COG0241 HisB Histidinol phosph 86.8 4.9 0.00011 38.4 9.3 26 614-639 32-57 (181)
183 COG1011 Predicted hydrolase (H 84.7 3.9 8.5E-05 41.0 8.3 42 612-654 98-139 (229)
184 COG3700 AphA Acid phosphatase 84.6 2.1 4.6E-05 39.7 5.4 39 614-652 115-157 (237)
185 TIGR01680 Veg_Stor_Prot vegeta 84.3 4.5 9.8E-05 41.2 8.2 30 612-641 144-173 (275)
186 TIGR02468 sucrsPsyn_pln sucros 84.1 13 0.00028 45.6 13.3 49 723-771 945-1002(1050)
187 PHA03398 viral phosphatase sup 82.9 2 4.3E-05 44.2 5.1 41 615-655 150-190 (303)
188 TIGR01663 PNK-3'Pase polynucle 82.5 3.6 7.7E-05 46.7 7.4 27 614-640 198-224 (526)
189 TIGR01458 HAD-SF-IIA-hyp3 HAD- 82.0 1.3 2.8E-05 45.6 3.6 60 735-794 187-253 (257)
190 TIGR02251 HIF-SF_euk Dullard-l 81.6 1.3 2.9E-05 41.8 3.2 43 609-652 38-80 (162)
191 TIGR02244 HAD-IG-Ncltidse HAD 81.0 9.2 0.0002 40.8 9.5 38 614-651 185-223 (343)
192 TIGR01493 HAD-SF-IA-v2 Haloaci 80.3 1.6 3.5E-05 41.8 3.4 33 613-652 90-122 (175)
193 COG2503 Predicted secreted aci 76.8 15 0.00032 36.4 8.5 40 614-653 123-166 (274)
194 PF05822 UMPH-1: Pyrimidine 5' 75.3 13 0.00029 37.3 8.1 43 613-655 90-132 (246)
195 KOG0210 P-type ATPase [Inorgan 73.5 13 0.00028 42.4 8.1 178 9-191 74-268 (1051)
196 TIGR01452 PGP_euk phosphoglyco 68.9 7.7 0.00017 40.5 5.2 33 735-767 210-243 (279)
197 cd02071 MM_CoA_mut_B12_BD meth 67.5 18 0.00038 32.3 6.5 81 549-653 22-104 (122)
198 PF12689 Acid_PPase: Acid Phos 66.7 33 0.00071 32.6 8.3 41 613-653 45-86 (169)
199 PF03332 PMM: Eukaryotic phosp 63.7 7.3 0.00016 38.2 3.4 48 722-769 150-205 (220)
200 KOG3040 Predicted sugar phosph 63.0 16 0.00034 35.3 5.3 52 602-653 12-66 (262)
201 PRK02261 methylaspartate mutas 61.5 92 0.002 28.4 10.0 80 549-652 26-113 (137)
202 cd02067 B12-binding B12 bindin 61.3 29 0.00062 30.7 6.7 81 549-653 22-104 (119)
203 TIGR01460 HAD-SF-IIA Haloacid 58.8 17 0.00036 36.8 5.3 47 606-652 7-57 (236)
204 PTZ00445 p36-lilke protein; Pr 55.4 21 0.00045 34.9 4.9 32 735-766 169-200 (219)
205 KOG2914 Predicted haloacid-hal 54.5 45 0.00098 33.2 7.2 101 613-769 92-194 (222)
206 TIGR01459 HAD-SF-IIA-hyp4 HAD- 54.0 11 0.00023 38.4 3.0 33 735-767 203-237 (242)
207 KOG3085 Predicted hydrolase (H 50.6 53 0.0011 33.0 7.0 44 735-778 176-220 (237)
208 TIGR02370 pyl_corrinoid methyl 45.9 44 0.00095 32.7 5.7 79 549-653 107-188 (197)
209 TIGR01501 MthylAspMutase methy 44.6 1.9E+02 0.0042 26.2 9.1 80 549-652 24-111 (134)
210 TIGR01456 CECR5 HAD-superfamil 43.4 70 0.0015 34.1 7.2 47 606-652 9-63 (321)
211 PLN02645 phosphoglycolate phos 41.9 36 0.00077 36.1 4.7 59 735-793 238-305 (311)
212 TIGR00640 acid_CoA_mut_C methy 41.5 89 0.0019 28.3 6.5 82 548-653 24-107 (132)
213 TIGR01517 ATPase-IIB_Ca plasma 40.7 60 0.0013 40.4 7.0 63 67-129 132-207 (941)
214 PF06941 NT5C: 5' nucleotidase 40.3 24 0.00051 34.3 2.9 29 613-641 73-101 (191)
215 TIGR02250 FCP1_euk FCP1-like p 39.8 50 0.0011 30.9 4.8 43 610-653 55-97 (156)
216 PF15584 Imm44: Immunity prote 39.3 13 0.00029 30.5 0.7 20 121-140 13-32 (94)
217 PF03120 DNA_ligase_OB: NAD-de 39.1 17 0.00037 29.7 1.3 27 114-140 45-72 (82)
218 COG5012 Predicted cobalamin bi 38.7 41 0.00089 33.1 4.0 84 548-655 126-210 (227)
219 PRK11507 ribosome-associated p 38.4 32 0.00069 27.1 2.6 26 104-129 38-63 (70)
220 PF12710 HAD: haloacid dehalog 36.0 18 0.00039 34.9 1.2 21 543-563 94-114 (192)
221 PF13275 S4_2: S4 domain; PDB: 35.9 17 0.00038 28.1 0.8 26 105-131 35-60 (65)
222 cd05017 SIS_PGI_PMI_1 The memb 35.4 63 0.0014 28.5 4.6 37 614-652 55-91 (119)
223 TIGR01657 P-ATPase-V P-type AT 34.7 2.2E+02 0.0047 36.1 10.7 66 68-141 191-256 (1054)
224 PF11019 DUF2608: Protein of u 34.5 1.5E+02 0.0032 30.3 7.7 43 613-655 81-126 (252)
225 cd02072 Glm_B12_BD B12 binding 32.7 1.7E+02 0.0037 26.3 6.7 80 549-652 22-109 (128)
226 cd05013 SIS_RpiR RpiR-like pro 32.4 3.3E+02 0.0071 24.0 9.1 30 616-645 74-103 (139)
227 COG0279 GmhA Phosphoheptose is 31.6 4.5E+02 0.0098 24.8 9.8 34 617-650 29-63 (176)
228 COG4229 Predicted enolase-phos 29.7 1.6E+02 0.0035 28.0 6.1 31 611-641 101-131 (229)
229 PF12791 RsgI_N: Anti-sigma fa 29.6 78 0.0017 23.5 3.5 37 99-135 4-42 (56)
230 PF08645 PNK3P: Polynucleotide 29.5 48 0.001 31.1 2.9 26 614-639 30-55 (159)
231 cd00860 ThrRS_anticodon ThrRS 28.9 1.1E+02 0.0024 25.0 4.8 46 607-652 6-52 (91)
232 COG0279 GmhA Phosphoheptose is 28.9 57 0.0012 30.5 3.1 33 615-647 122-154 (176)
233 PF13380 CoA_binding_2: CoA bi 28.8 94 0.002 27.3 4.5 39 614-652 64-103 (116)
234 cd02070 corrinoid_protein_B12- 28.7 1.1E+02 0.0024 30.0 5.4 79 549-653 105-186 (201)
235 cd05008 SIS_GlmS_GlmD_1 SIS (S 28.6 56 0.0012 29.0 3.1 32 615-646 59-90 (126)
236 PRK14194 bifunctional 5,10-met 28.0 5.4E+02 0.012 27.0 10.4 61 725-785 138-207 (301)
237 cd05710 SIS_1 A subgroup of th 26.5 64 0.0014 28.5 3.0 33 614-646 59-91 (120)
238 COG1188 Ribosome-associated he 26.3 66 0.0014 27.3 2.8 27 105-132 36-62 (100)
239 cd05014 SIS_Kpsf KpsF-like pro 26.0 56 0.0012 29.0 2.6 34 614-647 59-92 (128)
240 PF03129 HGTP_anticodon: Antic 26.0 1.3E+02 0.0027 25.0 4.7 47 606-652 3-53 (94)
241 PF06645 SPC12: Microsomal sig 25.8 1.1E+02 0.0023 24.7 3.8 24 262-285 6-29 (76)
242 PF01455 HupF_HypC: HupF/HypC 25.8 1.2E+02 0.0027 23.7 4.1 32 100-131 16-50 (68)
243 PRK11033 zntA zinc/cadmium/mer 25.4 5.2E+02 0.011 31.2 11.3 62 74-142 210-271 (741)
244 PF09926 DUF2158: Uncharacteri 24.8 44 0.00095 24.7 1.3 12 120-131 2-13 (53)
245 TIGR02988 YaaA_near_RecF S4 do 22.8 87 0.0019 23.6 2.7 28 98-127 31-58 (59)
246 PRK05585 yajC preprotein trans 22.2 93 0.002 26.9 3.0 13 118-130 52-64 (106)
247 TIGR00739 yajC preprotein tran 22.0 88 0.0019 25.7 2.7 8 119-126 38-45 (84)
248 TIGR01494 ATPase_P-type ATPase 21.9 1.6E+02 0.0034 33.7 5.9 24 106-129 52-75 (499)
249 smart00831 Cation_ATPase_N Cat 21.7 2.1E+02 0.0045 21.7 4.7 33 253-285 29-61 (64)
250 smart00306 HintN Hint (Hedgeho 21.6 1E+02 0.0022 25.7 3.4 27 102-128 73-99 (100)
251 cd00859 HisRS_anticodon HisRS 21.4 1.7E+02 0.0037 23.5 4.7 46 607-652 6-52 (91)
252 KOG2882 p-Nitrophenyl phosphat 21.2 1.6E+02 0.0035 30.5 5.0 48 606-653 31-81 (306)
253 PF14336 DUF4392: Domain of un 21.1 3.9E+02 0.0084 28.0 8.0 42 611-652 58-100 (291)
254 COG0522 RpsD Ribosomal protein 20.8 79 0.0017 31.0 2.6 32 104-135 120-151 (205)
255 KOG3109 Haloacid dehalogenase- 20.5 3.4E+02 0.0073 26.9 6.6 125 606-787 92-219 (244)
256 cd04906 ACT_ThrD-I_1 First of 20.4 1.1E+02 0.0024 25.1 3.1 35 606-640 42-77 (85)
No 1
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=3.1e-125 Score=1127.27 Aligned_cols=816 Identities=36% Similarity=0.619 Sum_probs=696.6
Q ss_pred ceEEEeCCCcc--ccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhh
Q 003364 2 KRYIYINDDET--SQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAV 79 (826)
Q Consensus 2 ~r~~~~~~~~~--r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~ 79 (826)
.|.||+|+.+. .+.+|+.|.+.++||++|+|+|+.+|+||++++|+|||+++++++++.+.+.++.++++|+++++++
T Consensus 70 ~r~i~~~~~~~~~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v 149 (1178)
T PLN03190 70 ARLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLV 149 (1178)
T ss_pred ceEEEcCCCCcccccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHH
Confidence 59999998643 3447999999999999999999999999999999999999999999999998899999999999999
Q ss_pred hhhHHHHHHHHhhhhhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCC
Q 003364 80 SATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (826)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGE 159 (826)
+++.+++++++|++++++.|++.++|+|+|++++++|++|+|||+|.|++||++||||+|++|++++|.|+||||+||||
T Consensus 150 ~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGE 229 (1178)
T PLN03190 150 TAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGE 229 (1178)
T ss_pred HHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999999999
Q ss_pred CCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEE
Q 003364 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (826)
Q Consensus 160 s~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~ 239 (826)
|.|+.|.+.+.+... .....++++.++|+.|++++++|+|.+++.. ...+++.+|++++||.+++++|++|+|+
T Consensus 230 t~~k~k~~~~~~~~~-~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~-----~~~~l~~~n~llRG~~LrnT~~i~GvVV 303 (1178)
T PLN03190 230 SNLKTRYAKQETLSK-IPEKEKINGLIKCEKPNRNIYGFQANMEVDG-----KRLSLGPSNIILRGCELKNTAWAIGVAV 303 (1178)
T ss_pred eeeeEecccchhhhc-chhhhhceEEEEEeCCCccceeEEEEEEECC-----CcccCCccceeeccceecCCceEEEEEE
Confidence 999999887655422 1234567899999999999999999998753 3456789999999999999999999999
Q ss_pred EeCCcceeeccCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCC-------C-----
Q 003364 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQE-------F----- 307 (826)
Q Consensus 240 ~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-------~----- 307 (826)
|||++|+++++....+.|.+++++.+|+++.+++++.+++++++++++..|........||+.+... .
T Consensus 304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 383 (1178)
T PLN03190 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNY 383 (1178)
T ss_pred EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 9999999999988888899999999999999999988888888777665554322223344321100 0
Q ss_pred -cc-chhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcc
Q 003364 308 -PW-YELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (826)
Q Consensus 308 -~~-~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGT 385 (826)
.+ ...++.+.++++++..+||++|++++++++..++++|++|.+|++...+.++.+|+.++.|+||+|++||+|||||
T Consensus 384 ~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGT 463 (1178)
T PLN03190 384 YGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGT 463 (1178)
T ss_pred chhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCc
Confidence 01 1224445556678889999999999999999999999999999999988889999999999999999999999999
Q ss_pred cccceeeEEEEEEcCeeecCCCCCc----------------------ccchhhhhhhcc-----CCchHHHHHHHhhhce
Q 003364 386 LTENRMIFRRCCIGGIFYGNETGDA----------------------LKDVGLLNAITS-----GSPDVIRFLTVMAVCN 438 (826)
Q Consensus 386 LT~~~~~v~~i~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~-----~~~~~~~~~~~l~~c~ 438 (826)
||+|+|.+++|++++..|+.+.... ..+..+...... ..+.+.+++.++++||
T Consensus 464 LT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalCh 543 (1178)
T PLN03190 464 LTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACN 543 (1178)
T ss_pred cccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcC
Confidence 9999999999999998886431100 001111111100 0123567999999999
Q ss_pred eeecccCC---C---CceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEE
Q 003364 439 TVIPAKSK---A---GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVK 512 (826)
Q Consensus 439 ~~~~~~~~---~---~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~ 512 (826)
++.+...+ + +...|.+++|+|.||+++|++.|+.+.+++++.+.++..+....|++++.+||+|+||||||+++
T Consensus 544 tv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~ 623 (1178)
T PLN03190 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILG 623 (1178)
T ss_pred CceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEE
Confidence 99875211 2 23568899999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCeEEEEecCchhhhhhhhhcC---CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHH
Q 003364 513 DCHSGNISLLSKGADEAILPYAHAG---QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 589 (826)
Q Consensus 513 ~~~~~~~~~~~KGa~e~i~~~~~~~---~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~ 589 (826)
.+ ++++++|+|||||.|+++|+.. ..++++.+.+++|+.+|+||+++|||.++++++.+|...|.++...+.+++.
T Consensus 624 ~~-~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~ 702 (1178)
T PLN03190 624 CP-DKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAA 702 (1178)
T ss_pred cC-CCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHH
Confidence 75 5779999999999999999742 3456788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCH
Q 003364 590 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 669 (826)
Q Consensus 590 ~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~ 669 (826)
.+++..+.+|+||+++|+++++|++|++++++|++|+++||++||+|||+..+|.++|++||++.++.. .+.++....
T Consensus 703 ~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~--~i~i~~~~~ 780 (1178)
T PLN03190 703 LLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMT--QIIINSNSK 780 (1178)
T ss_pred HHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCe--eEEecCCch
Confidence 999999999999999999999999999999999999999999999999999999999999999987654 444444433
Q ss_pred HHHHHHHHHHHHH---cc-----------cccCCCCceEEEEcChhHHHHHH-HHHHHHhhhccccceeEEEEeCcccHH
Q 003364 670 DEVCRSLERVLLT---MR-----------ITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKA 734 (826)
Q Consensus 670 ~~~~~~~~~~~~~---~~-----------~~~~~~~~~~l~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~p~~K~ 734 (826)
+.....++..... .. ..........++++|..+..+.+ ...+.|.++...++..+|||++|.||+
T Consensus 781 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa 860 (1178)
T PLN03190 781 ESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKA 860 (1178)
T ss_pred hhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHH
Confidence 3332222221110 00 00112345789999999998875 455667777666777899999999999
Q ss_pred HHHHHhhcC-CCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchhcchhheeecchhhHHHHHHHHHHH
Q 003364 735 QLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYS 813 (826)
Q Consensus 735 ~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~l~l~~gr~~~~~~~~~~~~~ 813 (826)
++|+.+++. ++.|+|+|||.||++||++|||||+++|.+|.+++.+|||++..|++|.+++|+|||++|.|+.+++.|+
T Consensus 861 ~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 861 GIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999987 5789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHhhhC
Q 003364 814 FYKSLLICFIQIL 826 (826)
Q Consensus 814 ~~~~~~~~~~~~~ 826 (826)
||||++++++||+
T Consensus 941 fYKN~~~~~~qf~ 953 (1178)
T PLN03190 941 FYRNAVFVLVLFW 953 (1178)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999984
No 2
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=4.9e-121 Score=1106.83 Aligned_cols=803 Identities=42% Similarity=0.715 Sum_probs=685.2
Q ss_pred CCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHHHhhhhhH
Q 003364 17 YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDK 96 (826)
Q Consensus 17 ~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~ 96 (826)
|++|++.++||++|+|+|+.||+||++++|+|||+++++++++.+++.++.++++|++++++++++.+++++++|+++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 68999999999999999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred hhcceEEEEEeC-CeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccCC-
Q 003364 97 KANEKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGM- 174 (826)
Q Consensus 97 ~~~~~~~~V~r~-g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~~- 174 (826)
+.|+++|+|+|+ |++++++|++|+|||||.|++||++|||++|++|++++|.|+||||+|||||.|+.|.+.+.+...
T Consensus 81 ~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~ 160 (1057)
T TIGR01652 81 EVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKML 160 (1057)
T ss_pred HHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccC
Confidence 999999999997 899999999999999999999999999999999998889999999999999999999987655432
Q ss_pred CHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCCCC
Q 003364 175 DFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGIP 254 (826)
Q Consensus 175 ~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~~~ 254 (826)
.......+++.++|+.|+.+.++|+|++++.+. +..+++.+|++++||.+++++|++|+|++||++|+++++....
T Consensus 161 ~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~----~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~ 236 (1057)
T TIGR01652 161 DEDDIKNFSGEIECEQPNASLYSFQGNMTINGD----RQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQA 236 (1057)
T ss_pred ChhhHhhceEEEEEcCCCCcceEEEEEEEECCC----CcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCC
Confidence 344566789999999999999999999998542 4567899999999999999889999999999999999988888
Q ss_pred CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCC--CccchhhhhhhHHHHHhcccccceeh
Q 003364 255 EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQE--FPWYELLVIPLRFELLCSIMIPISIK 332 (826)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~iP~~l~ 332 (826)
+.|.+++++.+++++.+++.++++++++.+++...|........||+..... ......++.+..++.+++.++|++|+
T Consensus 237 ~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~ 316 (1057)
T TIGR01652 237 PSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLY 316 (1057)
T ss_pred cccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeee
Confidence 8899999999999999988888888877777655554333333577643211 11223344456677789999999999
Q ss_pred hhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCc--
Q 003364 333 VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDA-- 410 (826)
Q Consensus 333 v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~-- 410 (826)
+++++++.++++|+++|.+|++++.+.++.+|+.+++|+||+|++||+|||||||+|+|.++++++++..|+......
T Consensus 317 v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~ 396 (1057)
T TIGR01652 317 VSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKD 396 (1057)
T ss_pred ehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHH
Confidence 999999999999999999999888777899999999999999999999999999999999999999998886431100
Q ss_pred ------------------------ccchhhhhhhc---cCCchHHHHHHHhhhceeeeccc--CCCCceeeecCCccHHH
Q 003364 411 ------------------------LKDVGLLNAIT---SGSPDVIRFLTVMAVCNTVIPAK--SKAGAILYKAQSQDEEA 461 (826)
Q Consensus 411 ------------------------~~~~~~~~~~~---~~~~~~~~~~~~l~~c~~~~~~~--~~~~~~~~~~~~~~e~a 461 (826)
..+.++..... ..++...+++.++++||++.+.. ++++.+.|.++||+|.|
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~A 476 (1057)
T TIGR01652 397 AIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAA 476 (1057)
T ss_pred HhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHH
Confidence 00111111111 11234678999999999998774 22234778899999999
Q ss_pred HHHHHHhCCeEEEeecCc--eEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc--C
Q 003364 462 LVHAAAQLHMVLVNKNAS--ILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--G 537 (826)
Q Consensus 462 ll~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~--~ 537 (826)
++++|+..|+.+.+++.+ .+.++..+....|++++.+||+|+||||||+++++ ++++++|+|||||.|+++|.. +
T Consensus 477 Ll~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~-~~~~~l~~KGA~e~il~~~~~~~~ 555 (1057)
T TIGR01652 477 LVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNP-DGRIKLLCKGADTVIFKRLSSGGN 555 (1057)
T ss_pred HHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeC-CCeEEEEEeCcHHHHHHHhhccch
Confidence 999999999999998877 55566677788999999999999999999999986 467899999999999999974 2
Q ss_pred CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCc
Q 003364 538 QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (826)
Q Consensus 538 ~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~ 617 (826)
..++++.+++++++.+|+||+++|||.++++++.+|.++|.++...+.+++..+++..+.+|+||+|+|+++++|++|++
T Consensus 556 ~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~ 635 (1057)
T TIGR01652 556 QVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEG 635 (1057)
T ss_pred hHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhc
Confidence 34567889999999999999999999999999999999999999998899988888889999999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHH---HHHHHHHHHcc---cccCCCC
Q 003364 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVC---RSLERVLLTMR---ITTSEPK 691 (826)
Q Consensus 618 ~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~ 691 (826)
++++|++|+++||++||+|||+..||.++|++||+++++.. ++.+++...++.. ..+........ .......
T Consensus 636 v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~--~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 636 VPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNME--QIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred cHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCe--EEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999987554 4555554433221 11111110000 0112245
Q ss_pred ceEEEEcChhHHHHHHH-HHHHHhhhccccceeEEEEeCcccHHHHHHHhhcC-CCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 692 DVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
...++++|..++.+.+. .+++|..+...++..+|||++|+||+++|+.+|.. ++.|+|+|||.||++||++|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 67899999999877654 35567766666777899999999999999999997 99999999999999999999999999
Q ss_pred cCCchHHHHhhccccccchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhhC
Q 003364 770 SGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIL 826 (826)
Q Consensus 770 ~gn~~~~~~~~Ad~v~~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (826)
.|.++.+++.+||+++.+|+.|.++++.|||++|+|+++++.|.||+|+++++++|+
T Consensus 794 ~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~ 850 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFW 850 (1057)
T ss_pred cChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888899999999999999999888999999999999999999999999998863
No 3
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=6.3e-117 Score=1015.07 Aligned_cols=812 Identities=44% Similarity=0.737 Sum_probs=709.4
Q ss_pred ceEEEeCCC---ccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhh
Q 003364 2 KRYIYINDD---ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFA 78 (826)
Q Consensus 2 ~r~~~~~~~---~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~ 78 (826)
.|.+|.|+. +.+..+|..|++.++||++++|+|+.+|+||+++.|+|||+++++++++ +.+.+++.+++|+++++.
T Consensus 14 ~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~~~~~~pl~~vl~ 92 (1151)
T KOG0206|consen 14 SRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNPYTTLVPLLFVLG 92 (1151)
T ss_pred ceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCccceeeceeeeeh
Confidence 489999984 4466799999999999999999999999999999999999999999999 779999999999999999
Q ss_pred hhhhHHHHHHHHhhhhhHhhcceEEEEEeCCe-EEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCC
Q 003364 79 VSATKEAWDDYNRYLSDKKANEKEVWVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALD 157 (826)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~r~g~-~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lT 157 (826)
+++++++++|++|++.|+++|+.+|.|.|++. +++..|++|+|||+|.+..++.+|||.+|++|++++|.|+|++++|+
T Consensus 93 ~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLD 172 (1151)
T KOG0206|consen 93 ITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLD 172 (1151)
T ss_pred HHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecC
Confidence 99999999999999999999999999999644 89999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeeccccccCC-CHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEE
Q 003364 158 GETDLKTRLIPAACMGM-DFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236 (826)
Q Consensus 158 GEs~p~~K~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~ 236 (826)
||++++.|++...+... .......+++.++|+.|+.+.+.|.|++..... ..++..+|.+++|+.+++++|++|
T Consensus 173 GEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~-----~~pl~~~~~Llrg~~lrNT~~v~G 247 (1151)
T KOG0206|consen 173 GETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQ-----IYPLSPDNLLLRGSRLRNTEWVYG 247 (1151)
T ss_pred CccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccC-----CCCCcHHHcccCCceeccCcEEEE
Confidence 99999999987665553 344577889999999999999999999984321 118899999999999999999999
Q ss_pred EEEEeCCcceeeccCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccc---cccceeeCCCCCccchhh
Q 003364 237 VAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEA---RKQWYVLYPQEFPWYELL 313 (826)
Q Consensus 237 ~V~~tG~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 313 (826)
+|++||++|+++++....+.|++.+++..|+....++++.++++++..+...+|..... ...||+.... .....+
T Consensus 248 ~vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 325 (1151)
T KOG0206|consen 248 VVVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSE--AAYAGF 325 (1151)
T ss_pred EEEEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCch--HHHHHH
Confidence 99999999999999999999999999999999999888888888887776655554221 1345554322 223445
Q ss_pred hhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeE
Q 003364 314 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393 (826)
Q Consensus 314 ~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v 393 (826)
..+.++.+++..++|++|++++.+.+..++.|+++|.+|++.+.+.++.+|+.+..|+||+|++|++|||||||+|.|.+
T Consensus 326 ~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F 405 (1151)
T KOG0206|consen 326 VHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEF 405 (1151)
T ss_pred HHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeee
Confidence 55667778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCeeecCCCCCc---------------------ccchhhhhhhcc---CCchHHHHHHHhhhceeeecccC-CCC
Q 003364 394 RRCCIGGIFYGNETGDA---------------------LKDVGLLNAITS---GSPDVIRFLTVMAVCNTVIPAKS-KAG 448 (826)
Q Consensus 394 ~~i~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~---~~~~~~~~~~~l~~c~~~~~~~~-~~~ 448 (826)
.+|++++..|+....+. ..+..+.+.... ..+...+++.++++||++.+..+ +++
T Consensus 406 ~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~ 485 (1151)
T KOG0206|consen 406 KKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSG 485 (1151)
T ss_pred ecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCcc
Confidence 99999999888753221 011111111111 34557789999999999999884 444
Q ss_pred ceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchh
Q 003364 449 AILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADE 528 (826)
Q Consensus 449 ~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e 528 (826)
++.|.+.+|+|.|+++.|+..|+.+..+.++.+.+...+....|+++..++|+|.|||||||||.+ +|+..+|||||+.
T Consensus 486 ~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p-~g~i~LycKGADs 564 (1151)
T KOG0206|consen 486 KLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDP-DGRILLYCKGADS 564 (1151)
T ss_pred ceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcC-CCcEEEEEcCcch
Confidence 899999999999999999999999999999999888767678999999999999999999999998 6799999999999
Q ss_pred hhhhhhhcCC--ChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEE
Q 003364 529 AILPYAHAGQ--QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLG 606 (826)
Q Consensus 529 ~i~~~~~~~~--~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG 606 (826)
+|.+++..++ ..+.-.+++++|+.+|+|++|+|||.++++|+.+|.++|.++..++.+|++.+++.++.+|+||+++|
T Consensus 565 vI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 565 VIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred hhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 9999998532 34556689999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCC------HHHHH-------
Q 003364 607 VTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT------EDEVC------- 673 (826)
Q Consensus 607 ~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~------~~~~~------- 673 (826)
..++||+++++++++|.+|++||||+|++|||..+||..++..|++..++.. .+.++... .+...
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~--~i~i~~~~~~~~~~~~~~~~~~~~l~ 722 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMK--LIIINTETSEELSSLDATAALKETLL 722 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCce--EEEEecCChhhhcchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998776 33333322 11111
Q ss_pred HHHHHHHHHcccccCCCCceEEEEcChhHHHHHHH-HHHHHhhhccccceeEEEEeCcccHHHHHHHhhc-CCCeEEEEc
Q 003364 674 RSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIG 751 (826)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~-~~~~v~~iG 751 (826)
................ ...+++++|+.+...++. .+..|..+...++..++||++|.||+.+|+..+. .+..++|||
T Consensus 723 ~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIG 801 (1151)
T KOG0206|consen 723 RKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIG 801 (1151)
T ss_pred HhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEee
Confidence 1111111111111111 479999999999887765 5568888888999999999999999999999975 578999999
Q ss_pred CCcccHHhHHhCCccEEecCCchHHHHhhccccccchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 752 DGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 752 Dg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
||.||++|++.|||||.++|.+|.++..+||+.+..|++|++++|+|||++|.|+++++.|+||||+.+++++|
T Consensus 802 DGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~f 875 (1151)
T KOG0206|consen 802 DGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLF 875 (1151)
T ss_pred CCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-108 Score=861.87 Aligned_cols=767 Identities=36% Similarity=0.597 Sum_probs=675.8
Q ss_pred cccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHHHh
Q 003364 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (826)
Q Consensus 12 ~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 91 (826)
.++++|.+|.+.+.||++++|+|..+++||+.|.|+|||+.++.++++.+.-....++|.|+.+++.++.+.+++++++|
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999887777778899999999999999999999999
Q ss_pred hhhhHhhcceEEEEE-eCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeecccc
Q 003364 92 YLSDKKANEKEVWVV-KQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAA 170 (826)
Q Consensus 92 ~~~~~~~~~~~~~V~-r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~ 170 (826)
++.++..|+...+++ |+|-... |+++|++||+|.+.++++||||++||.+++++|+|++.+..|+||+..+.|.|.+.
T Consensus 154 ~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~ 232 (1051)
T KOG0210|consen 154 RRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPR 232 (1051)
T ss_pred HHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccchh
Confidence 999999999999887 5665444 99999999999999999999999999999999999999999999999999999988
Q ss_pred ccCCCHh-hhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeec
Q 003364 171 CMGMDFE-LLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGM 249 (826)
Q Consensus 171 ~~~~~~~-~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~ 249 (826)
++..+.+ .++.++ +-.+.|+.++++|-|++++.. +.++.+++.+|+++++|.+.+| .++|+|+|||.+|+..+
T Consensus 233 tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d---~~~~~~LsventLWanTVvAs~-t~~gvVvYTG~dtRsvM 306 (1051)
T KOG0210|consen 233 TQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITD---SDKPESLSVENTLWANTVVASG-TAIGVVVYTGRDTRSVM 306 (1051)
T ss_pred hccCCcccchheEE--EeccCcchhhHhhEEEEEEec---CCCCCcccccceeeeeeeEecC-cEEEEEEEecccHHHHh
Confidence 8776554 556565 778899999999999999964 3445889999999999999999 59999999999999999
Q ss_pred cCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHHhcccccc
Q 003364 250 TRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPI 329 (826)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~ 329 (826)
+.+.++.|-..++..+|.+.++++.+.++++++....-.. ...|| - ..++|+++++.+||+
T Consensus 307 Nts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~------~~~wy----------i---~~~RfllLFS~IIPI 367 (1051)
T KOG0210|consen 307 NTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF------GSDWY----------I---YIIRFLLLFSSIIPI 367 (1051)
T ss_pred ccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC------CCchH----------H---HHHHHHHHHhhhcee
Confidence 9999999999999999999999999988888766543211 11243 2 236888899999999
Q ss_pred eehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCC
Q 003364 330 SIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGD 409 (826)
Q Consensus 330 ~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~ 409 (826)
+|-+.+++++..+++.+..|.++. +..+|+..+.|+||++.++.+|||||||+|.|.++++.++-..|..+..+
T Consensus 368 SLRvnlDmaK~~ys~~i~~D~~Ip------gtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~ 441 (1051)
T KOG0210|consen 368 SLRVNLDMAKIVYSWQIEHDKNIP------GTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMD 441 (1051)
T ss_pred EEEEehhHHHhhHhhhcccCCCCC------ceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHH
Confidence 999999999999999776666553 47799999999999999999999999999999999999988777665322
Q ss_pred cccchhhhhhh---------------ccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEE
Q 003364 410 ALKDVGLLNAI---------------TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 474 (826)
Q Consensus 410 ~~~~~~~~~~~---------------~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~ 474 (826)
... ....... ...+..+.++..++++||+++|..+++|+..|.+.+|+|.|++++....|..+.
T Consensus 442 eV~-~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~ 520 (1051)
T KOG0210|consen 442 EVS-QHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLA 520 (1051)
T ss_pred HHH-HHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEe
Confidence 111 0000000 011234678999999999999999999999999999999999999999999999
Q ss_pred eecCceEEEEeC-CeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHHHHHHHc
Q 003364 475 NKNASILEIKFN-GSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQL 553 (826)
Q Consensus 475 ~~~~~~~~~~~~-~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~ 553 (826)
.|+.+.+....+ +...+|+|++.+||+|+.|||.+||+++.++++..|.|||+-+|...... ..++++...+++++
T Consensus 521 ~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---NdWleEE~gNMARE 597 (1051)
T KOG0210|consen 521 KRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---NDWLEEECGNMARE 597 (1051)
T ss_pred ecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc---chhhhhhhhhhhhh
Confidence 999998888765 45679999999999999999999999998999999999999999888753 56899999999999
Q ss_pred CCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH-HhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeE
Q 003364 554 GLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ-RLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINF 632 (826)
Q Consensus 554 G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v 632 (826)
|+|++++|.|.++.+|++.+...|+.+..+..+|.+++.+..+ .+|+||+++|+.|.||+++++++.+++.||+|||++
T Consensus 598 GLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgiki 677 (1051)
T KOG0210|consen 598 GLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKI 677 (1051)
T ss_pred cceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEE
Confidence 9999999999999999999999999999999999999998777 899999999999999999999999999999999999
Q ss_pred EEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecC-CCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHH
Q 003364 633 WMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDG-KTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRK 711 (826)
Q Consensus 633 ~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 711 (826)
||+|||..+||..+|+..++...++. +..+.. ..-.+....++.. ......+++++|++++..++.++.
T Consensus 678 WMLTGDKlETA~ciAkSs~L~sR~q~--ihv~~~v~sr~dah~eL~~l--------R~k~~~aLvi~G~Sl~~cl~yye~ 747 (1051)
T KOG0210|consen 678 WMLTGDKLETAICIAKSSRLFSRGQY--IHVIRSVTSRGDAHNELNNL--------RRKTDCALVIDGESLEFCLKYYED 747 (1051)
T ss_pred EEEcCcchhheeeeehhccceecCce--EEEEEecCCchHHHHHHHHh--------hcCCCcEEEEcCchHHHHHHHHHH
Confidence 99999999999999999999887654 322222 2222333222221 234578999999999999999999
Q ss_pred HHhhhccccceeEEEEeCcccHHHHHHHhhcC-CCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchhc
Q 003364 712 AFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (826)
Q Consensus 712 ~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~ 790 (826)
+|.++.+-....++||++|.||+++++.+++. +..|+++|||-||+.|+++||+||.+.|++|.++.-+||+.+..|.+
T Consensus 748 Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~H 827 (1051)
T KOG0210|consen 748 EFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSH 827 (1051)
T ss_pred HHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHH
Confidence 99998888889999999999999999999984 78999999999999999999999999999999999999999999999
Q ss_pred chhheeecchhhHHHHHHHHHHHhhhhHHHHHhh
Q 003364 791 LKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824 (826)
Q Consensus 791 l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 824 (826)
+.+++++|||.+|+|..++.+|.+.+++++..+|
T Consensus 828 v~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Q 861 (1051)
T KOG0210|consen 828 VSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQ 861 (1051)
T ss_pred HHHHhhccccchHHHHHHHHHHHHhhhHHHHHHH
Confidence 9999999999999999999999999999998876
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-98 Score=890.12 Aligned_cols=650 Identities=30% Similarity=0.421 Sum_probs=518.6
Q ss_pred ccccccCCCceEEeecc-cccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcc-cchhhhhhhhhhhhhHHHHHH
Q 003364 11 ETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPA-STWGPLIFIFAVSATKEAWDD 88 (826)
Q Consensus 11 ~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~-~~~~~l~~i~~~~~~~~~~~~ 88 (826)
.+|++.||.|+++..+. ++| ..++.+|.+++++.++++++++++.... .+. ..+..++.+++++.+..++++
T Consensus 51 ~~r~~~~G~N~~~~~~~~~~~----~~fl~~f~~~~~~iL~~~a~~s~~~~~~--~~~~~~~~~I~~~i~~n~~~g~~qe 124 (917)
T COG0474 51 KRRLKKYGPNELPEEKKRSLL----KKFLRQFKDPFIILLLVAALLSAFVGDW--VDAGVDAIVILLVVVINALLGFVQE 124 (917)
T ss_pred HHHHhhcCCccccccccCcHH----HHHHHHHHHHHHHHHHHHHHHHHHhhcc--cccCcceeeehHHHHHHHHHHHHHH
Confidence 45889999999997765 556 8899999999998888888888765421 111 233445556667777788899
Q ss_pred HHhhh---hhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceee
Q 003364 89 YNRYL---SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR 165 (826)
Q Consensus 89 ~~~~~---~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K 165 (826)
+++.+ +++++.+.+++|+|||++++|++++|||||||.|++||+||||++|+++++ +.||||+|||||.|+.|
T Consensus 125 ~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K 200 (917)
T COG0474 125 YRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK 200 (917)
T ss_pred HHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhc
Confidence 88855 567778899999999999999999999999999999999999999998775 69999999999999999
Q ss_pred eccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcc
Q 003364 166 LIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNET 245 (826)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T 245 (826)
.+...... +.| ..++..|++|+||.+.+| .+.|+|++||++|
T Consensus 201 ~~~~~~~~---------------~~~----------------------~~~d~~n~l~sGt~V~~G-~~~giVvaTG~~T 242 (917)
T COG0474 201 QALPLTKS---------------DAP----------------------LGLDRDNMLFSGTTVVSG-RAKGIVVATGFET 242 (917)
T ss_pred cccccccc---------------ccc----------------------ccCCccceEEeCCEEEcc-eEEEEEEEEcCcc
Confidence 75432110 000 002578999999999999 6999999999999
Q ss_pred eeeccCCC---CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHH
Q 003364 246 KLGMTRGI---PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (826)
Q Consensus 246 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (826)
..|++... .....+++++.++++...++.++++++++.++..... ....|...+. ..+.+
T Consensus 243 ~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~---~~v~l 305 (917)
T COG0474 243 EFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFR--------------GGNGLLESFL---TALAL 305 (917)
T ss_pred HHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------------cCccHHHHHH---HHHHH
Confidence 99998664 2257899999999999999999888888777665211 1112444443 34457
Q ss_pred hcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCee
Q 003364 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF 402 (826)
Q Consensus 323 ~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~ 402 (826)
++.++|++||++++++..+++. +|.+++ +++|+++++|+||++++||+|||||||+|+|+|.++++.+.
T Consensus 306 ~va~IPegLp~~vti~la~g~~------~mak~~----~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~- 374 (917)
T COG0474 306 AVAAVPEGLPAVVTIALALGAQ------RMAKDN----AIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG- 374 (917)
T ss_pred HHhccccchHHHHHHHHHHHHH------HHHhcc----chhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC-
Confidence 8899999999999999999888 555554 78999999999999999999999999999999999998851
Q ss_pred ecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEE
Q 003364 403 YGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILE 482 (826)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~ 482 (826)
..+.+ + .....++...+++.++++||+..+..+ + ++..+||+|.|+++++.+.|+.. . .
T Consensus 375 --~~~~~---~-----~~~~~~~~~~~~l~~~~lc~~~~~~~~-~---~~~~gdptE~Al~~~a~~~~~~~-~--~---- 433 (917)
T COG0474 375 --GKDID---D-----KDLKDSPALLRFLLAAALCNSVTPEKN-G---WYQAGDPTEGALVEFAEKLGFSL-D--L---- 433 (917)
T ss_pred --ccccc---c-----cccccchHHHHHHHHHHhcCccccccc-C---ceecCCccHHHHHHHHHhcCCcC-C--H----
Confidence 00000 0 011123345578899999999887655 3 67789999999999999988643 1 0
Q ss_pred EEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc--------CCChhHHHHHHHHHHHcC
Q 003364 483 IKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--------GQQTRTFVEAVEQYSQLG 554 (826)
Q Consensus 483 ~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~--------~~~~~~~~~~~~~~~~~G 554 (826)
......+++++.+||+|+||||+|+++.. ++++++++|||||.|+++|+. +..++.+.+..++|+.+|
T Consensus 434 ---~~~~~~~~~~~~~PFdS~rKrMsviv~~~-~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~g 509 (917)
T COG0474 434 ---SGLEVEYPILAEIPFDSERKRMSVIVKTD-EGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEG 509 (917)
T ss_pred ---HHHhhhcceeEEecCCCCceEEEEEEEcC-CCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHH
Confidence 22234568899999999999999999954 455999999999999999974 234577899999999999
Q ss_pred CeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEE
Q 003364 555 LRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWM 634 (826)
Q Consensus 555 ~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i 634 (826)
+||+++|||.++..+... .. +..|+||+|+|+++|+||+|+++++||+.|+++||++||
T Consensus 510 lRvla~A~k~~~~~~~~~--------------------~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~M 568 (917)
T COG0474 510 LRVLAVAYKKLDRAEKDD--------------------EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWM 568 (917)
T ss_pred HHHHHHHhccCCcccccc--------------------hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEE
Confidence 999999999776543211 01 467899999999999999999999999999999999999
Q ss_pred EcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHH-HHHH
Q 003364 635 LTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHY-RKAF 713 (826)
Q Consensus 635 ~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~-~~~~ 713 (826)
+|||+..||.++|++||+...... .++++|..+..+.++. .+.
T Consensus 569 iTGD~~~TA~aIa~~~Gi~~~~~~-----------------------------------~~vi~G~el~~l~~~el~~~- 612 (917)
T COG0474 569 ITGDHVETAIAIAKECGIEAEAES-----------------------------------ALVIDGAELDALSDEELAEL- 612 (917)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCCc-----------------------------------eeEeehHHhhhcCHHHHHHH-
Confidence 999999999999999998543211 4567777776665541 222
Q ss_pred hhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHh-hccccccc--hhc
Q 003364 714 TELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGK--FRF 790 (826)
Q Consensus 714 ~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~-~Ad~v~~~--~~~ 790 (826)
.....+|||++|+||.++|+.+|+.|+.|+|+|||.||+||||.||||||| |..++++.+ +||+++.+ +..
T Consensus 613 -----~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIam-g~~Gtdaak~Aadivl~dd~~~~ 686 (917)
T COG0474 613 -----VEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM-GGEGTDAAKEAADIVLLDDNFAT 686 (917)
T ss_pred -----hhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEe-cccHHHHHHhhcceEeecCcHHH
Confidence 122449999999999999999999999999999999999999999999999 655666665 88998833 333
Q ss_pred chhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 791 LKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 791 l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
+.. .+.|||++|.|+++++.|.+++|+...++++
T Consensus 687 i~~-av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~ 720 (917)
T COG0474 687 IVL-AVVEGRRVYVNIKKFILYLLSKNVGEVLTLL 720 (917)
T ss_pred HHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 6889999999999999999999998666654
No 6
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-98 Score=808.78 Aligned_cols=684 Identities=23% Similarity=0.281 Sum_probs=512.2
Q ss_pred ccccccCCCceEEeecc-cccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHH
Q 003364 11 ETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDY 89 (826)
Q Consensus 11 ~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 89 (826)
..|++.||.|+++.... +.| +.+++||.+++..++|+.+++++.... +...+.+.+++++.++..+||+|
T Consensus 30 ~~r~~~yG~Nel~~ee~~~~w----k~vLeQF~n~Li~iLL~sA~ISfvl~~-----~~e~~vI~liiv~nvtVG~~QEy 100 (972)
T KOG0202|consen 30 TRRRKKYGENELPAEEGESLW----KLVLEQFDNPLILILLLSAAISFVLAD-----FDEPFVITLIIVINVTVGFVQEY 100 (972)
T ss_pred HHHHHhcCCccCccccCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHHh-----cccceeeeeeeeeeeeeeeeeeh
Confidence 45999999999998654 566 999999999999999999999987542 22334455566677888999999
Q ss_pred Hhhhh---hHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeee
Q 003364 90 NRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (826)
Q Consensus 90 ~~~~~---~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~ 166 (826)
++.|+ ++++.|+.|+|+|+|+.+.+++++|||||||.|+-||+||||.+|++..+ +.||||+|||||.|+.|.
T Consensus 101 ~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~ 176 (972)
T KOG0202|consen 101 NAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKD 176 (972)
T ss_pred hhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCccccccc
Confidence 98776 56667899999999999999999999999999999999999999999887 899999999999999995
Q ss_pred ccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcce
Q 003364 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (826)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~ 246 (826)
.... | .+++...-+++|++|+||.+..| .+.|+|+.||.+|.
T Consensus 177 t~~v--------------------~-----------------~~~~~~~~dk~NiaFsGT~V~~G-~a~GIVi~TG~nTe 218 (972)
T KOG0202|consen 177 TDAV--------------------P-----------------KDENADVQDKKNIAFSGTLVVAG-RAKGIVIGTGLNTE 218 (972)
T ss_pred Cccc--------------------c-----------------CCCCCccccceeeEeecceeecC-ceeEEEEeccccch
Confidence 3211 0 01222223688999999999999 89999999999999
Q ss_pred eeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHh--hcchhccccccccceeeCCCCCccchhhhhhhHHHH
Q 003364 247 LGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGT--AGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFEL 321 (826)
Q Consensus 247 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (826)
+|++.. ..+..++|+|+.++.+...+.-+..++++.+++ ++++... .+...|+ ..+..++.++++
T Consensus 219 iG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p-~~~g~~f------k~~~~~f~IaVs--- 288 (972)
T KOG0202|consen 219 IGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDP-VHGGSWF------KGALYYFKIAVS--- 288 (972)
T ss_pred HHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccc-cccccch------hchhhhhhHHHH---
Confidence 998654 345668999999999988877333322222222 2211100 0001121 123444554443
Q ss_pred HhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCe
Q 003364 322 LCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGI 401 (826)
Q Consensus 322 l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~ 401 (826)
+..++||.+||+.++....++.+ +|.+++ +.+|.+..+|+||.+++||+|||||||+|+|.+.++|+.+.
T Consensus 289 LAVAAIPEGLPaVvT~tLALG~~------rMakkn----aIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~ 358 (972)
T KOG0202|consen 289 LAVAAIPEGLPAVVTTTLALGTR------RMAKKN----AIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDG 358 (972)
T ss_pred HHHHhccCCCcchhhhhHHHhHH------HHHhhh----hhhhcccchhhccceeEEecCCCCcccccceEEEEEEeccc
Confidence 56789999999777666666665 777776 78999999999999999999999999999999999999876
Q ss_pred eecCCC-----CCcc-------cchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhC
Q 003364 402 FYGNET-----GDAL-------KDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQL 469 (826)
Q Consensus 402 ~~~~~~-----~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~ 469 (826)
.+...+ +... .+...........+.+.+++++.++||.+....++. ......|.|+|.||..++.+.
T Consensus 359 ~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm 437 (972)
T KOG0202|consen 359 GTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKM 437 (972)
T ss_pred ccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHc
Confidence 554431 0000 000000001123456889999999999887665543 233336899999999999999
Q ss_pred CeEEEeecCc-eEEE-EeCC-eEEEEEEEEeeccCCCCCceEEEEEecCC-CeEEEEecCchhhhhhhhhc---------
Q 003364 470 HMVLVNKNAS-ILEI-KFNG-SVLQYEILETLEFTSDRKRMSVVVKDCHS-GNISLLSKGADEAILPYAHA--------- 536 (826)
Q Consensus 470 ~~~~~~~~~~-~~~~-~~~~-~~~~~~i~~~~~f~~~~k~~sviv~~~~~-~~~~~~~KGa~e~i~~~~~~--------- 536 (826)
|+.-...... ...- .++. ....++..+.+||+++||+|+|.+.+.++ ..+.+|+|||+|.++++|+.
T Consensus 438 ~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~ 517 (972)
T KOG0202|consen 438 GLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTK 517 (972)
T ss_pred CCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCcee
Confidence 8754331110 0000 0000 12345677999999999999999998755 35899999999999999952
Q ss_pred ----CCChhHHHHHHHHHHHcCCeEEEEEEEecCH-H-HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEee
Q 003364 537 ----GQQTRTFVEAVEQYSQLGLRTLCLAWREVEE-D-EYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAI 610 (826)
Q Consensus 537 ----~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~ 610 (826)
+..++.+.+...+|+.+|+||+++|+++.+. . +... .....-+...|+||+|+|++|+
T Consensus 518 ~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~----------------l~~~s~~~~~E~~LtFvGlVGi 581 (972)
T KOG0202|consen 518 VPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQD----------------LNDTSNRATAESDLTFVGLVGI 581 (972)
T ss_pred eeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhh----------------hcccccccccccceEEEEEeec
Confidence 1235678899999999999999999998764 1 1000 0001123578899999999999
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
.||+|++++++|+.|+++||+|.|+|||+..||.++|+++|+...+..-.-..+.|.++++
T Consensus 582 ~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~------------------- 642 (972)
T KOG0202|consen 582 LDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDD------------------- 642 (972)
T ss_pred cCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhc-------------------
Confidence 9999999999999999999999999999999999999999987765432222333433333
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
+..+... .......+|+|++|.+|.++|+.|++.++.|+|.|||.||+|+||.||+||||
T Consensus 643 --------------ls~~~~~-----~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM- 702 (972)
T KOG0202|consen 643 --------------LSDEELD-----DAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM- 702 (972)
T ss_pred --------------CCHHHHH-----HHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee-
Confidence 2222111 11344789999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHh-hccccccc--hhcchhheeecchhhHHHHHHHHHHHhhhhHHHHH
Q 003364 771 GREGLQAAR-AADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICF 822 (826)
Q Consensus 771 gn~~~~~~~-~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~ 822 (826)
|..++++++ +||+|+.+ |..+.. .+-|||.+|+|+++++.|.+..|+.-..
T Consensus 703 G~~GTdVaKeAsDMVL~DDnFstIva-AVEEGr~IynNik~Fir~~lSsnVgev~ 756 (972)
T KOG0202|consen 703 GISGTDVAKEASDMVLADDNFSTIVA-AVEEGRAIYNNIKNFIRYLLSSNVGEVV 756 (972)
T ss_pred cCCccHhhHhhhhcEEecCcHHHHHH-HHHHhHHHHHHHHHHHHHHHhhhHHHHH
Confidence 855555555 99999954 444443 2447999999999999999999985433
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.9e-95 Score=870.12 Aligned_cols=690 Identities=21% Similarity=0.246 Sum_probs=514.1
Q ss_pred CCccccccCCCceEEeecc-cccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHH
Q 003364 9 DDETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWD 87 (826)
Q Consensus 9 ~~~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~ 87 (826)
+.++|+++||+|+++.++. ++| ..|++||.+|++++++++++++++.. .+...+.+++++++++++.+++
T Consensus 31 ea~~rl~~~G~N~l~~~~~~s~~----~~~l~q~~~~~~~iL~~aails~~~~-----~~~~~~iIl~vv~in~~i~~~Q 101 (1053)
T TIGR01523 31 EAQHRLKEVGENRLEADSGIDAK----AMLLHQVCNAMCMVLIIAAAISFAMH-----DWIEGGVISAIIALNILIGFIQ 101 (1053)
T ss_pred HHHHHHHHcCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHh-----hHHHHHHHHhHHHHHHHHHHHH
Confidence 3467999999999999875 566 89999999999988888888888643 2223345566677788899999
Q ss_pred HHHhhhh---hHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCcee
Q 003364 88 DYNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKT 164 (826)
Q Consensus 88 ~~~~~~~---~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~ 164 (826)
++++.++ ++++.+++++|+|||++++|++++|||||||.|++||+|||||+|+++++ +.||||+|||||.|+.
T Consensus 102 E~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~ 177 (1053)
T TIGR01523 102 EYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVI 177 (1053)
T ss_pred HHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCcee
Confidence 9998775 55667789999999999999999999999999999999999999998766 9999999999999999
Q ss_pred eeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCc
Q 003364 165 RLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNE 244 (826)
Q Consensus 165 K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~ 244 (826)
|.+..... .+.+....+..|++|+||.|.+| .+.|+|++||.+
T Consensus 178 K~~~~~~~------------------------------------~~~~~~~~d~~n~lf~GT~V~~G-~g~~vVvatG~~ 220 (1053)
T TIGR01523 178 KDAHATFG------------------------------------KEEDTPIGDRINLAFSSSAVTKG-RAKGICIATALN 220 (1053)
T ss_pred cccccccc------------------------------------ccccCCcccCCCccccCceEEee-eEEEEEEEecCc
Confidence 96421100 00001112567999999999999 799999999999
Q ss_pred ceeeccCCCC---C-----------------------------------CccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003364 245 TKLGMTRGIP---E-----------------------------------PKLTAVDAMIDKLTGAIFVFQIVVVIVLGTA 286 (826)
Q Consensus 245 T~~~~~~~~~---~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 286 (826)
|.+|++.+.. . ..++|+++.+++++.+++.++++++++++++
T Consensus 221 T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~ 300 (1053)
T TIGR01523 221 SEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAA 300 (1053)
T ss_pred cHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999864421 0 0148999999999998888777776665543
Q ss_pred cchhccccccccceeeCCCCCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCccccccc
Q 003364 287 GNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNT 366 (826)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 366 (826)
... . .+...+.++ +.++..++|++||+.++++..++++ +|.+++ +++|++
T Consensus 301 ~~~---------------~--~~~~~~~~a---v~l~Va~VPegLp~~vti~La~g~~------rMak~~----~lVr~L 350 (1053)
T TIGR01523 301 HKF---------------D--VDKEVAIYA---ICLAISIIPESLIAVLSITMAMGAA------NMSKRN----VIVRKL 350 (1053)
T ss_pred Hhh---------------h--hhHHHHHHH---HHHHHHHcccchHHHHHHHHHHHHH------HHHhcC----CEeccc
Confidence 210 0 011222222 2356788999999988888888877 666665 899999
Q ss_pred ccccccccceEEEecCCcccccceeeEEEEEEcC-eeecCCC---------CCc----------cc-----chhhhhh--
Q 003364 367 AISEDLAQVEYILTDKTGTLTENRMIFRRCCIGG-IFYGNET---------GDA----------LK-----DVGLLNA-- 419 (826)
Q Consensus 367 ~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~-~~~~~~~---------~~~----------~~-----~~~~~~~-- 419 (826)
.++|+||++++||+|||||||+|+|+|.++|+++ ..|..+. ++. .. .......
T Consensus 351 ~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (1053)
T TIGR01523 351 DALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFK 430 (1053)
T ss_pred hhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999864 1221100 000 00 0000000
Q ss_pred --hc-----c--CCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEE---eec------C-ce
Q 003364 420 --IT-----S--GSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV---NKN------A-SI 480 (826)
Q Consensus 420 --~~-----~--~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~---~~~------~-~~ 480 (826)
.. . .++...+++.+.++||++....++........|||+|.||++++.+.|+... ... . ..
T Consensus 431 ~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~ 510 (1053)
T TIGR01523 431 DELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQ 510 (1053)
T ss_pred ccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccc
Confidence 00 0 1123567888999999876543211111123589999999999998886321 000 0 00
Q ss_pred EEEE---eCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC-------------CChhHHH
Q 003364 481 LEIK---FNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-------------QQTRTFV 544 (826)
Q Consensus 481 ~~~~---~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~-------------~~~~~~~ 544 (826)
...+ ..+....|+++..+||+|+||||+++++..+++.+++|+|||||.|+++|+.. ..++.+.
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~ 590 (1053)
T TIGR01523 511 SSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELII 590 (1053)
T ss_pred cccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHH
Confidence 0000 01123468899999999999999999987544568999999999999999631 1135677
Q ss_pred HHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHH
Q 003364 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (826)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~ 624 (826)
+.+++|+++|+||+++|||.++.++...+ .+... .. .++.+|+||+|+|+++++||+|++++++|++
T Consensus 591 ~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~~---~~--------~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~ 657 (1053)
T TIGR01523 591 ANMESLAAEGLRVLAFASKSFDKADNNDD--QLKNE---TL--------NRATAESDLEFLGLIGIYDPPRNESAGAVEK 657 (1053)
T ss_pred HHHHHHHhcCCeEEEEEEEECCchhccch--hhhcc---cc--------chhhhccCCEEEEEEeeecCCchhHHHHHHH
Confidence 88999999999999999999986543211 00000 00 1135789999999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHH
Q 003364 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (826)
Q Consensus 625 l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 704 (826)
|+++||++||+|||+..+|.++|+++||...+.. ... . ......+++|..++.
T Consensus 658 l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~----~~~-~----------------------~~~~~~vitG~~l~~ 710 (1053)
T TIGR01523 658 CHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI----HDR-D----------------------EIMDSMVMTGSQFDA 710 (1053)
T ss_pred HHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc----ccc-c----------------------ccccceeeehHHhhh
Confidence 9999999999999999999999999999754210 000 0 001125677877766
Q ss_pred HHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC-CchHHHHhhccc
Q 003364 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAARAADY 783 (826)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~~~~~Ad~ 783 (826)
+.+...+.. .....+|+|++|+||.++|+.+++.++.|+|+|||.||+|||+.||||||| | ++.+-++++||+
T Consensus 711 l~~~~l~~~-----~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm-g~~gt~vak~aADi 784 (1053)
T TIGR01523 711 LSDEEVDDL-----KALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM-GINGSDVAKDASDI 784 (1053)
T ss_pred cCHHHHHHH-----hhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec-CCCccHHHHHhcCE
Confidence 544322222 233579999999999999999999999999999999999999999999999 7 444445669999
Q ss_pred ccc--chhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 784 SIG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 784 v~~--~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
++. +|..+.+. +.+||++|+|+++++.|.+++|+...++.+
T Consensus 785 vl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~ 827 (1053)
T TIGR01523 785 VLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLAENVAEAILLI 827 (1053)
T ss_pred EEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 994 57888884 689999999999999999999997766554
No 8
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=3.4e-93 Score=860.51 Aligned_cols=694 Identities=21% Similarity=0.261 Sum_probs=509.3
Q ss_pred ccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHHH
Q 003364 11 ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (826)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 90 (826)
++|+++||+|+++.+++++| +++++++.+|++++++++++++++. +++.+.+.++++++++.+...+++++
T Consensus 146 ~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~~-----~~~~~~~~i~~i~~~~~~~~~~~~~k 216 (1054)
T TIGR01657 146 AQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLLD-----EYYYYSLCIVFMSSTSISLSVYQIRK 216 (1054)
T ss_pred HHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999888777 8999999999987777766665532 22223334444555667778888888
Q ss_pred hhhhhHhhc--ceEEEEEeCCeEEEEEeecCccccEEEee--CCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeee
Q 003364 91 RYLSDKKAN--EKEVWVVKQGIKKLIQSQDIRVGNIVWLR--ENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (826)
Q Consensus 91 ~~~~~~~~~--~~~~~V~r~g~~~~i~~~~l~~GDII~l~--~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~ 166 (826)
..++++++. +..++|+|||+|++|++++|||||||.|+ +|++|||||+|+ +|.|.||||+|||||.|+.|.
T Consensus 217 ~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll-----~g~~~VdES~LTGES~Pv~K~ 291 (1054)
T TIGR01657 217 QMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLL-----SGSCIVNESMLTGESVPVLKF 291 (1054)
T ss_pred HHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEE-----eCcEEEecccccCCccceecc
Confidence 777766654 67899999999999999999999999999 999999999999 778999999999999999997
Q ss_pred ccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeec------CceEEEEEEE
Q 003364 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN------TEWACGVAVY 240 (826)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~------g~~~~~~V~~ 240 (826)
+.+..... +.+ ........+|++|+||.+.+ .+.+.|+|++
T Consensus 292 ~~~~~~~~-----------------~~~----------------~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~ 338 (1054)
T TIGR01657 292 PIPDNGDD-----------------DED----------------LFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVR 338 (1054)
T ss_pred cCCccccc-----------------ccc----------------ccccccccceEEEcCCEEEEEecCCCCCcEEEEEEe
Confidence 54210000 000 00011256789999999985 1379999999
Q ss_pred eCCcceeeccCCC---CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhh
Q 003364 241 TGNETKLGMTRGI---PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPL 317 (826)
Q Consensus 241 tG~~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (826)
||.+|..|++.+. .+++.+++++.+.++..+++.++++.+++.++.+ .. .+.++...+ +
T Consensus 339 TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~-~~--------------~~~~~~~~~---l 400 (1054)
T TIGR01657 339 TGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL-IK--------------DGRPLGKII---L 400 (1054)
T ss_pred CCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--------------cCCcHHHHH---H
Confidence 9999999987653 4556788888888887766555544333222211 00 111233333 4
Q ss_pred HHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEE
Q 003364 318 RFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCC 397 (826)
Q Consensus 318 ~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~ 397 (826)
.++.+++.++|++||++++++...+.. +|.+++ ++++++.++|.||++|++|||||||||+|+|.|.+++
T Consensus 401 ~~l~iiv~~vP~~LP~~~ti~l~~~~~------rL~k~~----il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~ 470 (1054)
T TIGR01657 401 RSLDIITIVVPPALPAELSIGINNSLA------RLKKKG----IFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQ 470 (1054)
T ss_pred HHHHHHHhhcCchHHHHHHHHHHHHHH------HHHHCC----EEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEe
Confidence 556678899999999999888877766 555544 8999999999999999999999999999999999998
Q ss_pred EcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeec
Q 003364 398 IGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKN 477 (826)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~ 477 (826)
..+...... .... ...+.....+..++++||++.... + ...|||+|.|+++++.+ ......
T Consensus 471 ~~~~~~~~~--~~~~--------~~~~~~~~~~~~~~a~C~~~~~~~---~---~~~Gdp~E~al~~~~~~---~~~~~~ 531 (1054)
T TIGR01657 471 GLSGNQEFL--KIVT--------EDSSLKPSITHKALATCHSLTKLE---G---KLVGDPLDKKMFEATGW---TLEEDD 531 (1054)
T ss_pred cccCccccc--cccc--------cccccCchHHHHHHHhCCeeEEEC---C---EEecCHHHHHHHHhCCC---EEECCC
Confidence 643211000 0000 001122345677899999987542 2 23699999999998743 222100
Q ss_pred CceE------EEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHHHHHH
Q 003364 478 ASIL------EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYS 551 (826)
Q Consensus 478 ~~~~------~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~ 551 (826)
.... .+...+....+++++++||+|++|||||+++..+++++++|+|||||.|+++|++...++++.+.+++|+
T Consensus 532 ~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a 611 (1054)
T TIGR01657 532 ESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYT 611 (1054)
T ss_pred CcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHH
Confidence 0000 0001122357999999999999999999999876678899999999999999997778899999999999
Q ss_pred HcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCe
Q 003364 552 QLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGIN 631 (826)
Q Consensus 552 ~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~ 631 (826)
.+|+||+++|||.+++.+..++.+ ..++.+|+||+|+|+++|+|++||+++++|++|+++||+
T Consensus 612 ~~G~RVLalA~k~l~~~~~~~~~~-----------------~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~ 674 (1054)
T TIGR01657 612 REGYRVLALAYKELPKLTLQKAQD-----------------LSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIR 674 (1054)
T ss_pred hcCCEEEEEEEeecCccchhhhhh-----------------ccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCe
Confidence 999999999999997433221110 112567899999999999999999999999999999999
Q ss_pred EEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCC--C-----------HHHHHH-HHHHHHHH----cccccCCCCce
Q 003364 632 FWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK--T-----------EDEVCR-SLERVLLT----MRITTSEPKDV 693 (826)
Q Consensus 632 v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~--~-----------~~~~~~-~~~~~~~~----~~~~~~~~~~~ 693 (826)
++|+|||+..||.++|+++||..++.. ++..+-. . .++... ........ ..........+
T Consensus 675 v~miTGD~~~TA~~iA~~~gii~~~~~--vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1054)
T TIGR01657 675 TVMITGDNPLTAVHVARECGIVNPSNT--LILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRY 752 (1054)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCCce--EEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccce
Confidence 999999999999999999999876432 2211100 0 000000 00000000 00001112345
Q ss_pred EEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCc
Q 003364 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGRE 773 (826)
Q Consensus 694 ~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~ 773 (826)
.++++|+.++.+.+...+.+..+ ..+..+|+|++|+||.++|+.+|..|+.|+|+|||.||++|||+||||||| +++
T Consensus 753 ~~~itG~~l~~l~~~~~~~l~~~--~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam-~~~ 829 (1054)
T TIGR01657 753 HLAMSGKAFAVLQAHSPELLLRL--LSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISL-SEA 829 (1054)
T ss_pred EEEEEcHHHHHHHHhhHHHHHHH--HhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceee-ccc
Confidence 78999999988765544444443 345679999999999999999999999999999999999999999999999 554
Q ss_pred hHHHHhhccccc--cchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHh
Q 003364 774 GLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823 (826)
Q Consensus 774 ~~~~~~~Ad~v~--~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~ 823 (826)
+++.+||++. +++..+.. ++.+||+++.++.++++|.+.++++..+.
T Consensus 830 --das~AA~f~l~~~~~~~I~~-~I~eGR~~l~~~~~~~~~~~~~~~~~~~~ 878 (1054)
T TIGR01657 830 --EASVAAPFTSKLASISCVPN-VIREGRCALVTSFQMFKYMALYSLIQFYS 878 (1054)
T ss_pred --cceeecccccCCCcHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567899997 56677777 45699999999999999988888765443
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.1e-93 Score=858.98 Aligned_cols=691 Identities=21% Similarity=0.246 Sum_probs=516.7
Q ss_pred CCCccccccCCCceEEeeccc-ccccccHHHHHHhhhHHHHHHHHHHHHhhccCccc--------cCcccchhhhhhhhh
Q 003364 8 NDDETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP--------VNPASTWGPLIFIFA 78 (826)
Q Consensus 8 ~~~~~r~~~~g~N~i~~~~~~-~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~--------~~~~~~~~~l~~i~~ 78 (826)
.+.++|+++||+|+++.++.+ +| +.|+++|.+|+++.++++++++++..... .+.+...++++++++
T Consensus 40 ~e~~~rl~~~G~N~l~~~~~~~~~----~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~ 115 (997)
T TIGR01106 40 ARAAEILARDGPNALTPPPTTPEW----VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVI 115 (997)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCHH----HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHH
Confidence 345679999999999887654 55 88999999999999988888866532110 012223345666777
Q ss_pred hhhhHHHHHHHHhhhhhHhh---cceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCC
Q 003364 79 VSATKEAWDDYNRYLSDKKA---NEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAA 155 (826)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~---~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~ 155 (826)
+++++.+++++++.++++++ .+.+++|+|||++++|++++|||||+|.|++||+|||||+|+++++ +.||||+
T Consensus 116 i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~ 191 (997)
T TIGR01106 116 ITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSS 191 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccc
Confidence 78889999999988776544 4679999999999999999999999999999999999999996543 8999999
Q ss_pred CCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEE
Q 003364 156 LDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWAC 235 (826)
Q Consensus 156 lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~ 235 (826)
|||||.|+.|.+.. ....++..+|.+|+||.+.+| .+.
T Consensus 192 LTGES~pv~K~~~~-----------------------------------------~~~~~~~~~n~l~~Gt~v~~G-~~~ 229 (997)
T TIGR01106 192 LTGESEPQTRSPEF-----------------------------------------THENPLETRNIAFFSTNCVEG-TAR 229 (997)
T ss_pred cCCCCCceeccCCC-----------------------------------------cccCccccCCeEEeccEeeee-eEE
Confidence 99999999996431 011234678999999999999 799
Q ss_pred EEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchh
Q 003364 236 GVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYEL 312 (826)
Q Consensus 236 ~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (826)
++|++||.+|.+|++.+ ..+.+++++++.+++++..+..+++++++++++++... ...|...
T Consensus 230 ~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~ 294 (997)
T TIGR01106 230 GIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL---------------GYTWLEA 294 (997)
T ss_pred EEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cCCHHHH
Confidence 99999999999999766 34556799999999999888877776666555443221 1123333
Q ss_pred hhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceee
Q 003364 313 LVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMI 392 (826)
Q Consensus 313 ~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~ 392 (826)
+..++ .++..++|++||+++.++...++. +|.++ ++++|+++++|+||++++||||||||||+|+|+
T Consensus 295 ~~~~i---~v~v~~iP~~L~~~v~i~l~~~~~------~m~~~----~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~ 361 (997)
T TIGR01106 295 VIFLI---GIIVANVPEGLLATVTVCLTLTAK------RMARK----NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMT 361 (997)
T ss_pred HHHHH---HHHhhcCCccchHHHHHHHHHHHH------HHHHC----CcEecCcHHHHHhcCCCEEEECCCCceecCceE
Confidence 33222 245567999999988888887776 44444 389999999999999999999999999999999
Q ss_pred EEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCc---eeeecCCccHHHHHHHHHhC
Q 003364 393 FRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQL 469 (826)
Q Consensus 393 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~---~~~~~~~~~e~all~~a~~~ 469 (826)
|.++++++..|..+........ ......+....++.++++||++....+.++. -.+..|||+|.|+++++.+.
T Consensus 362 v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~ 437 (997)
T TIGR01106 362 VAHMWFDNQIHEADTTEDQSGV----SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELC 437 (997)
T ss_pred EEEEEECCeEEecCCccCCCCc----cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHh
Confidence 9999998876654321110000 0011123345688899999987654322110 12346899999999999864
Q ss_pred CeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEec--CCCeEEEEecCchhhhhhhhhc----C------
Q 003364 470 HMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC--HSGNISLLSKGADEAILPYAHA----G------ 537 (826)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~--~~~~~~~~~KGa~e~i~~~~~~----~------ 537 (826)
+... .+.+..++.+..+||+|+||||+++++.. +++++++|+|||||.|+++|+. +
T Consensus 438 ~~~~------------~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~ 505 (997)
T TIGR01106 438 LGSV------------MEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLD 505 (997)
T ss_pred CCCH------------HHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCC
Confidence 3211 11234577889999999999999988642 2357899999999999999962 1
Q ss_pred -CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHH-HHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccC
Q 003364 538 -QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQE-WSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQ 615 (826)
Q Consensus 538 -~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~ 615 (826)
+.++.+.+.+.+++++|+||+++|||.++.+++++ |. + +.+ ..+..|+||+|+|+++++||+|
T Consensus 506 ~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~--~--------~~~-----~~~~~e~~L~flGli~i~Dplr 570 (997)
T TIGR01106 506 EELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQ--F--------DTD-----DVNFPTDNLCFVGLISMIDPPR 570 (997)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEEeecCccccccccc--c--------cch-----hhhccccCcEEEEEEeccCCCh
Confidence 12355788889999999999999999997654322 10 0 000 0123478999999999999999
Q ss_pred CchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEE
Q 003364 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695 (826)
Q Consensus 616 ~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 695 (826)
++++++|++|+++|++++|+|||++.+|.++|+++|+..++... .+++........+. ........+
T Consensus 571 ~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~---------~~~i~~~~~~~~~~----~~~~~~~~~ 637 (997)
T TIGR01106 571 AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNET---------VEDIAARLNIPVSQ----VNPRDAKAC 637 (997)
T ss_pred HHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccc---------hhhhhhhccccccc----cccccccce
Confidence 99999999999999999999999999999999999997654320 01111100000000 001112247
Q ss_pred EEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchH
Q 003364 696 VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (826)
Q Consensus 696 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (826)
+++|..++.+.++. +.++.......+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.||||||| |++++
T Consensus 638 vi~G~~l~~l~~~e---l~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam-g~~G~ 713 (997)
T TIGR01106 638 VVHGSDLKDMTSEQ---LDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GIAGS 713 (997)
T ss_pred EEEhHHhhhCCHHH---HHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec-CCccc
Confidence 88998887765432 222111122469999999999999999999999999999999999999999999999 86666
Q ss_pred HHH-hhccccccc--hhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 776 QAA-RAADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 776 ~~~-~~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
++. ++||+++.+ |..+.+ .+.|||++|.|+++++.|.++.|+...++.+
T Consensus 714 ~vak~aADivL~dd~f~~Iv~-ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~ 765 (997)
T TIGR01106 714 DVSKQAADMILLDDNFASIVT-GVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 765 (997)
T ss_pred HHHHHhhceEEecCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 654 599999954 777777 4789999999999999999999997766654
No 10
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-94 Score=774.00 Aligned_cols=657 Identities=23% Similarity=0.346 Sum_probs=498.4
Q ss_pred ccccccCCCceEEeeccc-ccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccch----hhhhhhhhhhhhHHH
Q 003364 11 ETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTW----GPLIFIFAVSATKEA 85 (826)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~-~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~----~~l~~i~~~~~~~~~ 85 (826)
++|++.||+|.++.++.. +| .++|+.+.+..-+++++++++++...+.......+| .+++.++ +-.+..+
T Consensus 126 ~~Rr~~fG~N~~p~k~~K~Fl----~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~-~VV~VtA 200 (1034)
T KOG0204|consen 126 ERRRKIFGSNTYPEKPPKGFL----RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVI-LVVLVTA 200 (1034)
T ss_pred HHHHHhcCCCCCCCCCCccHH----HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEE-EEEEEee
Confidence 559999999999998764 55 889999999998889999999987776544333333 2222221 1223455
Q ss_pred HHHHHhhhhh----HhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCC
Q 003364 86 WDDYNRYLSD----KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETD 161 (826)
Q Consensus 86 ~~~~~~~~~~----~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~ 161 (826)
..||++.++. +...+.++.|+|||+.++|+..||+||||+.|+.||.+||||+++++++ +.+|||++||||.
T Consensus 201 ~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd 276 (1034)
T KOG0204|consen 201 VNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESD 276 (1034)
T ss_pred cchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCc
Confidence 5666665543 4445678999999999999999999999999999999999999997776 9999999999999
Q ss_pred ceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEe
Q 003364 162 LKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241 (826)
Q Consensus 162 p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~t 241 (826)
+++|.+ ..+.++++||++.+| .+.++|+.+
T Consensus 277 ~v~k~~-------------------------------------------------~~dPfLlSGTkv~eG-sgkMlVTaV 306 (1034)
T KOG0204|consen 277 HVQKSL-------------------------------------------------DKDPFLLSGTKVMEG-SGKMLVTAV 306 (1034)
T ss_pred ceeccC-------------------------------------------------CCCCeEeecceeecC-cceEEEEEe
Confidence 999942 245689999999999 899999999
Q ss_pred CCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcch--hcc-ccc-ccc-ceeeCCCCCccchhh
Q 003364 242 GNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNV--WKD-TEA-RKQ-WYVLYPQEFPWYELL 313 (826)
Q Consensus 242 G~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~-~~~-~~~-~~~~~~~~~~~~~~~ 313 (826)
|.+|.+|++.. ......+|+|-.+++++..+..+.++++.+++++..+ +.+ ... ..+ |-........+..++
T Consensus 307 Gmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f 386 (1034)
T KOG0204|consen 307 GMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFF 386 (1034)
T ss_pred eecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHh
Confidence 99999998654 3344789999999999988777776666555443211 111 100 000 100000000111222
Q ss_pred hhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeE
Q 003364 314 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393 (826)
Q Consensus 314 ~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v 393 (826)
.+++ .++..++|.+||.++.++....++ +|.+++ .++|.+++||+||..++||+|||||||+|+|+|
T Consensus 387 ~i~V---TilVVAVPEGLPLAVTLsLAys~k------kMmkD~----~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtV 453 (1034)
T KOG0204|consen 387 IIAV---TILVVAVPEGLPLAVTLSLAYSMK------KMMKDN----NLVRHLDACETMGSATAICSDKTGTLTTNRMTV 453 (1034)
T ss_pred hhee---EEEEEECCCCccHHHHHHHHHHHH------HHhcch----hHHHHhHHHhhcCCceEEEecCcCceEeeeEEE
Confidence 2222 256789999998655555544554 666666 689999999999999999999999999999999
Q ss_pred EEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHH-HHhhhceeeecccC-CCCceeeecCCccHHHHHHHHHhCCe
Q 003364 394 RRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFL-TVMAVCNTVIPAKS-KAGAILYKAQSQDEEALVHAAAQLHM 471 (826)
Q Consensus 394 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~c~~~~~~~~-~~~~~~~~~~~~~e~all~~a~~~~~ 471 (826)
.+.|+++..|..+.... ...++...+++ .+++...+...... +.+......|+|+|+||+.|+...|.
T Consensus 454 V~~~~~~~~~k~~~~~~----------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~ 523 (1034)
T KOG0204|consen 454 VQSYIGSEHYKVNSPKS----------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGM 523 (1034)
T ss_pred EeeeeccccccccCccc----------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCc
Confidence 99999888776443221 12344555444 34444333333332 23323345799999999999999998
Q ss_pred EEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc------------CCC
Q 003364 472 VLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA------------GQQ 539 (826)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~------------~~~ 539 (826)
++ +..+...++.+.+||+|.||+|+|+++.++++.| +|+|||+|.++..|.. ++.
T Consensus 524 ~~------------~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~ 590 (1034)
T KOG0204|consen 524 DF------------QDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDD 590 (1034)
T ss_pred ch------------HhhcchhheeEEeccCcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHH
Confidence 65 3445667889999999999999999998866655 9999999999999972 223
Q ss_pred hhHHHHHHHHHHHcCCeEEEEEEEecCHH--HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCc
Q 003364 540 TRTFVEAVEQYSQLGLRTLCLAWREVEED--EYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (826)
Q Consensus 540 ~~~~~~~~~~~~~~G~rvl~~A~k~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~ 617 (826)
...+++.++.|+.+|+|++|+|||+.... +.++|.+ ....+.+++++|++|++||+||+
T Consensus 591 ~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-------------------~~~~~~~lt~laivGIkDPvRPg 651 (1034)
T KOG0204|consen 591 RKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-------------------EELPEGGLTLLAIVGIKDPVRPG 651 (1034)
T ss_pred HHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------------------cccCCCCeEEEEEeeccCCCCCC
Confidence 45688999999999999999999995543 1111110 02456899999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEE
Q 003364 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVV 697 (826)
Q Consensus 618 ~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 697 (826)
+++||+.|+.+||.|.|+|||+..||+++|.+|||+.++.. ...++|.++.
T Consensus 652 V~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d--~~~lEG~eFr--------------------------- 702 (1034)
T KOG0204|consen 652 VPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD--FLALEGKEFR--------------------------- 702 (1034)
T ss_pred cHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc--cceecchhhh---------------------------
Confidence 99999999999999999999999999999999999998764 4444554443
Q ss_pred cChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHH
Q 003364 698 DGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA 777 (826)
Q Consensus 698 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~ 777 (826)
.+.++... ....+..+++|-+|.+|..+|+.|+..++.|++.|||.||.|+|+.||||.|| |-+++++
T Consensus 703 ------~~s~ee~~-----~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAM-GIaGTeV 770 (1034)
T KOG0204|consen 703 ------ELSQEERD-----KIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAM-GIAGTEV 770 (1034)
T ss_pred ------hcCHHHHH-----hhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhc-cccchhh
Confidence 33222221 12345688999999999999999999999999999999999999999999999 9888888
Q ss_pred Hh-hccccc--cchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHh
Q 003364 778 AR-AADYSI--GKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823 (826)
Q Consensus 778 ~~-~Ad~v~--~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~ 823 (826)
++ +||+++ ++|..+.+ .+.|||+.|.+++|+++|.+.-|++-.++
T Consensus 771 AKEaSDIIi~DDNFssIVk-~v~WGR~VY~nIqKFiQFQLTVNVvAliv 818 (1034)
T KOG0204|consen 771 AKEASDIIILDDNFSSIVK-AVKWGRNVYDNIQKFLQFQLTVNVVALIV 818 (1034)
T ss_pred hhhhCCeEEEcCchHHHHH-HHHhhhHHHHHHHHhheeEEEEEEEeehh
Confidence 77 999998 56677777 67899999999999999999888754433
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2.9e-92 Score=844.97 Aligned_cols=653 Identities=22% Similarity=0.300 Sum_probs=486.6
Q ss_pred CccccccCCCceEEeeccc-ccccccHHHHHHhhhHHHHHHHHHHHHhhccCcc-----ccCcccchh---hhhhhhhhh
Q 003364 10 DETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT-----PVNPASTWG---PLIFIFAVS 80 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~~-~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~-----~~~~~~~~~---~l~~i~~~~ 80 (826)
.++|+++||+|+++.++.+ +| ..++++|++|++++++++++++++.... ..++...|. .+++++++.
T Consensus 66 v~~r~~~yG~N~l~~~~~~s~~----~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~ 141 (941)
T TIGR01517 66 LERREKVYGKNELPEKPPKSFL----QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILV 141 (941)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHH
Confidence 4679999999999998774 55 8899999999999999999998875421 122222332 223334445
Q ss_pred hhHHHHHHHHhhhhhHh----hcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCC
Q 003364 81 ATKEAWDDYNRYLSDKK----ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAAL 156 (826)
Q Consensus 81 ~~~~~~~~~~~~~~~~~----~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~l 156 (826)
.++.+++++++.++.++ .++.+++|+|||++++|++++|+|||||.|++||+|||||+|++++ .+.||||+|
T Consensus 142 ~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~L 217 (941)
T TIGR01517 142 VLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESSI 217 (941)
T ss_pred hHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEeccc
Confidence 56677777776554333 3467899999999999999999999999999999999999999433 599999999
Q ss_pred CCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEE
Q 003364 157 DGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236 (826)
Q Consensus 157 TGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~ 236 (826)
||||.|+.|.+ ...|++|+||.+.+| .+.+
T Consensus 218 TGES~pv~K~~-------------------------------------------------~~~n~v~~GT~v~~G-~~~~ 247 (941)
T TIGR01517 218 TGESDPIKKGA-------------------------------------------------PKDSFLLSGTVVNEG-SGRM 247 (941)
T ss_pred CCCCCcccccC-------------------------------------------------CCCceEEeCCeEEee-EEEE
Confidence 99999999953 234789999999999 7999
Q ss_pred EEEEeCCcceeeccCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcch---hccccccccceeeCCCCCccch
Q 003364 237 VAVYTGNETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNV---WKDTEARKQWYVLYPQEFPWYE 311 (826)
Q Consensus 237 ~V~~tG~~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 311 (826)
+|++||.+|.+|++.+. ...+++++++.++++...+..++++++++.++++.. +.....+. +.......++..
T Consensus 248 iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 325 (941)
T TIGR01517 248 LVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDG--RDTEEDAQTFLD 325 (941)
T ss_pred EEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--cccchhhHHHHH
Confidence 99999999999986442 122557999999999988877766655554443321 11000000 000000012222
Q ss_pred hhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCccccccee
Q 003364 312 LLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRM 391 (826)
Q Consensus 312 ~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~ 391 (826)
.+ ..++.++..++|++||++++++...+.. +|.+++ +++|+++++|+||++|+||||||||||+|+|
T Consensus 326 ~~---~~al~llv~~iP~~Lp~~vti~l~~~~~------~mak~~----ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m 392 (941)
T TIGR01517 326 HF---IIAVTIVVVAVPEGLPLAVTIALAYSMK------KMMKDN----NLVRHLAACETMGSATAICSDKTGTLTQNVM 392 (941)
T ss_pred HH---HHHHHHHHhhCCCchHHHHHHHHHHHHH------HHHhCC----CEEechHHhhhccCceEEEEcCcCceeeceE
Confidence 22 3334467788999998777777666655 555554 8999999999999999999999999999999
Q ss_pred eEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCe
Q 003364 392 IFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHM 471 (826)
Q Consensus 392 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~ 471 (826)
+|.+++..+..+..+.. . ...++...+++...+.||+..+...++..-.+..+||+|.|+++++.+.+.
T Consensus 393 ~v~~~~~~~~~~~~~~~--------~---~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~ 461 (941)
T TIGR01517 393 SVVQGYIGEQRFNVRDV--------L---RNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGR 461 (941)
T ss_pred EEEEEEEecceEecCcc--------c---ccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCC
Confidence 99999876544432210 0 001123445555555666554322111111244689999999999987663
Q ss_pred EEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc-----CC------Ch
Q 003364 472 VLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ------QT 540 (826)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~-----~~------~~ 540 (826)
... ..+..+++++.+||++++|||+++++.. ++++++|+|||||.++++|+. +. .+
T Consensus 462 ~~~------------~~~~~~~~~~~~pF~s~~k~msvv~~~~-~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~ 528 (941)
T TIGR01517 462 DYQ------------EVRAEEKVVKIYPFNSERKFMSVVVKHS-GGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDK 528 (941)
T ss_pred CHH------------HHHhhchhccccccCCCCCeEEEEEEeC-CCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHH
Confidence 210 0123466788999999999999999874 467899999999999999963 11 13
Q ss_pred hHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHH
Q 003364 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPE 620 (826)
Q Consensus 541 ~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~ 620 (826)
+++.+.+++++.+|+||+++|||.++.++.+.+ +..|+||+|+|+++++|++|+++++
T Consensus 529 ~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~----------------------~~~e~~l~~lGli~~~Dplr~~~~~ 586 (941)
T TIGR01517 529 DRCADVIEPLASDALRTICLAYRDFAPEEFPRK----------------------DYPNGGLTLIGVVGIKDPLRPGVRE 586 (941)
T ss_pred HHHHHHHHHHHhcCCEEEEEEEEecCccccccc----------------------cccccCcEEEEEeeccCCCchhHHH
Confidence 567888899999999999999999875442211 2246899999999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcCh
Q 003364 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (826)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 700 (826)
+|++|+++|++++|+|||+..+|.++|+++||..++.. +++|.
T Consensus 587 aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~-------------------------------------vi~G~ 629 (941)
T TIGR01517 587 AVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGL-------------------------------------AMEGK 629 (941)
T ss_pred HHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCce-------------------------------------EeeHH
Confidence 99999999999999999999999999999999764321 33343
Q ss_pred hHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC-CchHHHHh
Q 003364 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAAR 779 (826)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~~~~ 779 (826)
.++.+.++. +.. ...+..+|+|++|+||.++|+.+|+.++.|+|+|||.||+|||++||||||| | ++.+-+++
T Consensus 630 ~~~~l~~~e---l~~--~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm-g~~gtdvAk~ 703 (941)
T TIGR01517 630 EFRRLVYEE---MDP--ILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM-GISGTEVAKE 703 (941)
T ss_pred HhhhCCHHH---HHH--HhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec-CCCccHHHHH
Confidence 333222111 111 1234689999999999999999999999999999999999999999999999 7 44444556
Q ss_pred hcccccc--chhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 780 AADYSIG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 780 ~Ad~v~~--~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
+||+++. +|..+.+. +.+||++|+|+++++.|.+++|+...++.+
T Consensus 704 aADivL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~ 750 (941)
T TIGR01517 704 ASDIILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTVNVVAVILTF 750 (941)
T ss_pred hCCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999995 67777774 589999999999999999999997766654
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.3e-90 Score=825.09 Aligned_cols=669 Identities=23% Similarity=0.290 Sum_probs=494.6
Q ss_pred HHHHhhhHHHHHHHHHHHHhhccCcccc-----CcccchhhhhhhhhhhhhHHHHHHHHhhhhh---HhhcceEEEEEeC
Q 003364 37 LWEQFSRFMNQYFLLIACLQLWSLITPV-----NPASTWGPLIFIFAVSATKEAWDDYNRYLSD---KKANEKEVWVVKQ 108 (826)
Q Consensus 37 l~~~~~~~~n~~~l~~~~l~~~~~~~~~-----~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~V~r~ 108 (826)
+++||++|++++++++++++++..+... ..+.....+++++++++++.+++++++.++. +++.+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 4689999999999999999988654321 1122224445566677888999999887654 4456789999999
Q ss_pred CeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEc
Q 003364 109 GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIEC 188 (826)
Q Consensus 109 g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~ 188 (826)
|++++|++++|||||||.|++||+|||||+|+++++ +.||||+|||||.|+.|.+....
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~----------------- 139 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVP----------------- 139 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccC-----------------
Confidence 999999999999999999999999999999996544 99999999999999999643110
Q ss_pred cCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCC---CCCCccchHHHHH
Q 003364 189 PGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMI 265 (826)
Q Consensus 189 ~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~ 265 (826)
+....+.+.+|++|+||.+.+| .+.++|++||.+|++|++.+ ..+.+++++++.+
T Consensus 140 ---------------------~~~~~~~~~~n~l~~GT~v~~G-~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l 197 (917)
T TIGR01116 140 ---------------------DERAVNQDKKNMLFSGTLVVAG-KARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKL 197 (917)
T ss_pred ---------------------ccccCcccccceeeeCCEEecc-eEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHH
Confidence 0111123567999999999999 79999999999999998543 4566789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhh-HHHHHhcccccceehhhHHHHHHHHHH
Q 003364 266 DKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPL-RFELLCSIMIPISIKVSLDLVKSLYAK 344 (826)
Q Consensus 266 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~iP~~l~v~l~~~~~~~~~ 344 (826)
++++..++.+.++++++.++++..+ |........|...+...+ ..+.++..++|++||++++++...+++
T Consensus 198 ~~~~~~l~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~ 268 (917)
T TIGR01116 198 DEFGELLSKVIGLICILVWVINIGH---------FNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR 268 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---------hccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHH
Confidence 9999888777666665554433211 000001112222111111 122356788999999999998888887
Q ss_pred HhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeee------cCCCCCcccc-hhhh
Q 003364 345 FIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY------GNETGDALKD-VGLL 417 (826)
Q Consensus 345 ~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~------~~~~~~~~~~-~~~~ 417 (826)
+|.+++ +++|+++++|+||++|+||||||||||+|+|+|.+++..+..+ ..... .... .+..
T Consensus 269 ------~m~~~~----ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 337 (917)
T TIGR01116 269 ------KMAKKN----AIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGT-TYAPEGGVI 337 (917)
T ss_pred ------HHHHCC----cEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCC-ccCCCcccc
Confidence 454443 8999999999999999999999999999999999998765321 10000 0000 0000
Q ss_pred hh---h-ccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCC----eE
Q 003364 418 NA---I-TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNG----SV 489 (826)
Q Consensus 418 ~~---~-~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~----~~ 489 (826)
.. . ...++....++.++++||++....++++......|||+|.|+++++.+.|+...............+ ..
T Consensus 338 ~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 417 (917)
T TIGR01116 338 KDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWN 417 (917)
T ss_pred ccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHH
Confidence 00 0 0012335678889999998765433222111125899999999999998876543322222111111 23
Q ss_pred EEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc-----CC-------ChhHHHHHHHHHHH-cCCe
Q 003364 490 LQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ-------QTRTFVEAVEQYSQ-LGLR 556 (826)
Q Consensus 490 ~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~-----~~-------~~~~~~~~~~~~~~-~G~r 556 (826)
..|++++.+||+|+||||+|+++. ++++++|+|||||.|+++|+. +. ..+++.+.++++++ +|+|
T Consensus 418 ~~~~~~~~~pF~s~rK~msviv~~--~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlR 495 (917)
T TIGR01116 418 DKFKKLATLEFSRDRKSMSVLCKP--STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALR 495 (917)
T ss_pred hhcceeeecccChhhCeEEEEEee--CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCe
Confidence 467899999999999999999986 467899999999999999963 11 23457788999999 9999
Q ss_pred EEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEc
Q 003364 557 TLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLT 636 (826)
Q Consensus 557 vl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~T 636 (826)
|+++|||.++.++... . ..+ ...++.+|+||+|+|+++++||+|++++++|++|+++|++++|+|
T Consensus 496 vl~~A~k~~~~~~~~~-~---------~~~-----~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miT 560 (917)
T TIGR01116 496 CLALAFKDIPDPREED-L---------LSD-----PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMIT 560 (917)
T ss_pred EEEEEEEECCcccccc-c---------ccc-----chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEec
Confidence 9999999987632110 0 000 012245789999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhh
Q 003364 637 GDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL 716 (826)
Q Consensus 637 Gd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 716 (826)
||+..+|.++|+++|+..++...... .++|..++.+.++.. .
T Consensus 561 GD~~~tA~~ia~~~gi~~~~~~v~~~---------------------------------~~~g~~l~~~~~~~~-----~ 602 (917)
T TIGR01116 561 GDNKETAEAICRRIGIFSPDEDVTFK---------------------------------SFTGREFDEMGPAKQ-----R 602 (917)
T ss_pred CCCHHHHHHHHHHcCCCCCCccccce---------------------------------eeeHHHHhhCCHHHH-----H
Confidence 99999999999999997654321011 223333222211111 1
Q ss_pred ccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc--hhcchhh
Q 003364 717 AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRL 794 (826)
Q Consensus 717 ~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~--~~~l~~l 794 (826)
....+..+|+|++|+||.++++.++..++.|+|+|||.||++||+.||+|||| |++.+.++++||+++.+ |..+.+.
T Consensus 603 ~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~-g~g~~~ak~aAD~vl~dd~f~~i~~~ 681 (917)
T TIGR01116 603 AACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM-GSGTEVAKEASDMVLADDNFATIVAA 681 (917)
T ss_pred HhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEEC-CCCcHHHHHhcCeEEccCCHHHHHHH
Confidence 12344689999999999999999999999999999999999999999999999 77766667799999965 7888885
Q ss_pred eeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 795 ILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 795 ~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
+.|||++|+|+++++.|.+++|+...++++
T Consensus 682 -i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~ 711 (917)
T TIGR01116 682 -VEEGRAIYNNMKQFIRYMISSNIGEVVCIF 711 (917)
T ss_pred -HHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 689999999999999999999998777654
No 13
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=5.5e-89 Score=811.77 Aligned_cols=641 Identities=22% Similarity=0.278 Sum_probs=489.1
Q ss_pred CccccccCCCceEEeecc-cccccccHHHHHHh-hhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHH
Q 003364 10 DETSQDLYCANRLSNRKY-TLMNFLPKNLWEQF-SRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWD 87 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~-~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~ 87 (826)
.++|+++||+|+++.++. ++| +.|+++| ++|++++++++++++++.. .+. ....+++++++..+..+++
T Consensus 30 v~~r~~~~G~N~i~~~~~~s~~----~~~l~~~~~~~~~~~L~~aa~ls~~~g----~~~-~~~~i~~~i~~~~~i~~~q 100 (884)
T TIGR01522 30 ASHRRAFHGWNEFDVEEDESLW----KKFLSQFVKNPLILLLIASAVISVFMG----NID-DAVSITLAILIVVTVGFVQ 100 (884)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH----HHHHHHHhhChHHHHHHHHHHHHHHHc----chh-hHHHHHhHHHHHHHHHHHH
Confidence 467999999999998865 566 8899999 8999988888888887643 122 2233333445566788899
Q ss_pred HHHhhhhh---HhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCcee
Q 003364 88 DYNRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKT 164 (826)
Q Consensus 88 ~~~~~~~~---~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~ 164 (826)
++++.++. +++.+.+++|+|||++++|++++|||||||.|++||+|||||+|+++++ +.||||+|||||.|+.
T Consensus 101 e~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~ 176 (884)
T TIGR01522 101 EYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVS 176 (884)
T ss_pred HHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCccee
Confidence 99876654 4556789999999999999999999999999999999999999995443 8999999999999999
Q ss_pred eeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCc
Q 003364 165 RLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNE 244 (826)
Q Consensus 165 K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~ 244 (826)
|.+.+... +........+|.+|+||.+.+| .+.++|++||.+
T Consensus 177 K~~~~~~~-------------------------------------~~~~~~~~~~n~v~~GT~v~~G-~~~~~V~~tG~~ 218 (884)
T TIGR01522 177 KVTAPIPA-------------------------------------ATNGDLAERSNIAFMGTLVRCG-HGKGIVVGTGSN 218 (884)
T ss_pred cccccccc-------------------------------------cccccccccCceEEeCCEEEee-eEEEEEEEecCc
Confidence 97542100 0001122567899999999999 799999999999
Q ss_pred ceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHH
Q 003364 245 TKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFEL 321 (826)
Q Consensus 245 T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (826)
|.+|++.+ ..+..++++++.+++++.++.+++++++++++++++. ...+|...+..++ .
T Consensus 219 T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~v---~ 280 (884)
T TIGR01522 219 TEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF---------------QGKDWLEMFTISV---S 280 (884)
T ss_pred cHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------hcCCHHHHHHHHH---H
Confidence 99998644 3455679999999999988777665554444443321 1123344443333 3
Q ss_pred HhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCe
Q 003364 322 LCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGI 401 (826)
Q Consensus 322 l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~ 401 (826)
++..++|++||+++.++...+.+ +|.+++ +++|++.++|+||++|+||||||||||+|+|.|.+++..+.
T Consensus 281 llv~aiP~~Lp~~vt~~l~~~~~------r~ak~~----ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~ 350 (884)
T TIGR01522 281 LAVAAIPEGLPIIVTVTLALGVL------RMSKKR----AIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDG 350 (884)
T ss_pred HHHHHccchHHHHHHHHHHHHHH------HHhhcC----CcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCc
Confidence 56678999999877777766665 555554 89999999999999999999999999999999999987654
Q ss_pred eecCCCCCcc-cchhhhh----hhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEee
Q 003364 402 FYGNETGDAL-KDVGLLN----AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNK 476 (826)
Q Consensus 402 ~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~ 476 (826)
.+........ ...+... .....++...+++.+.++||+......+ + ...+||+|.|+++++.+.|+..
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~---~~~g~p~e~All~~~~~~~~~~--- 423 (884)
T TIGR01522 351 LHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEA-D---TLLGNPTDVALIELLMKFGLDD--- 423 (884)
T ss_pred eEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCC-C---CcCCChHHHHHHHHHHHcCcHh---
Confidence 3211000000 0000000 0011134556788889999987543221 1 1247999999999998876521
Q ss_pred cCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc-----CC-------ChhHHH
Q 003364 477 NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ-------QTRTFV 544 (826)
Q Consensus 477 ~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~-----~~-------~~~~~~ 544 (826)
....++.++.+||+|++|||+++++...++++++|+||+||.|+..|+. +. .++.+.
T Consensus 424 -----------~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~ 492 (884)
T TIGR01522 424 -----------LRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQ 492 (884)
T ss_pred -----------HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHH
Confidence 1234677889999999999999998766678999999999999999963 11 134567
Q ss_pred HHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHH
Q 003364 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (826)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~ 624 (826)
+.+++++.+|+||+++|||.++ .+|+|+|+++++|++||+++++|++
T Consensus 493 ~~~~~~a~~G~rvl~~A~~~~~---------------------------------~~l~~lGli~l~Dp~r~~~~~~i~~ 539 (884)
T TIGR01522 493 EEAAEMASAGLRVIAFASGPEK---------------------------------GQLTFLGLVGINDPPRPGVKEAVTT 539 (884)
T ss_pred HHHHHHHhcCCEEEEEEEEcCC---------------------------------CCeEEEEEEeccCcchhHHHHHHHH
Confidence 7888999999999999998652 5899999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHH
Q 003364 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (826)
Q Consensus 625 l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 704 (826)
|+++|++++|+|||+..+|.++|+++|+...... +++|..++.
T Consensus 540 l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~-------------------------------------~v~g~~l~~ 582 (884)
T TIGR01522 540 LITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ-------------------------------------SVSGEKLDA 582 (884)
T ss_pred HHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc-------------------------------------eeEhHHhHh
Confidence 9999999999999999999999999999765332 122332222
Q ss_pred HHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHH-hhccc
Q 003364 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAADY 783 (826)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~-~~Ad~ 783 (826)
+.++. +.. ...+..+|+|++|++|..+++.++..++.|+|+|||.||+|||+.||||||| |.++++++ ++||+
T Consensus 583 ~~~~~---l~~--~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~-g~~g~~va~~aaDi 656 (884)
T TIGR01522 583 MDDQQ---LSQ--IVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM-GQTGTDVAKEAADM 656 (884)
T ss_pred CCHHH---HHH--HhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec-CCCcCHHHHHhcCE
Confidence 21111 111 1245689999999999999999999999999999999999999999999999 75555565 59999
Q ss_pred cc--cchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhh
Q 003364 784 SI--GKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824 (826)
Q Consensus 784 v~--~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 824 (826)
++ +++..+.. .+.+||.+|+|+++++.|.+..|+...++.
T Consensus 657 vl~dd~~~~i~~-~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~ 698 (884)
T TIGR01522 657 ILTDDDFATILS-AIEEGKGIFNNIKNFITFQLSTSVAALSLI 698 (884)
T ss_pred EEcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 99 55677777 477999999999999999999998766543
No 14
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=2.3e-89 Score=807.77 Aligned_cols=620 Identities=20% Similarity=0.256 Sum_probs=475.6
Q ss_pred CCccccccCCCceEEeeccc-ccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHH
Q 003364 9 DDETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWD 87 (826)
Q Consensus 9 ~~~~r~~~~g~N~i~~~~~~-~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~ 87 (826)
+.++|+++||+|+++.++++ +| ..|+++|++|++++++++++++++.. .+.....++++++++.++++++
T Consensus 72 ea~~r~~~~G~N~l~~~~~~s~~----~~~~~~~~~p~~~lL~~aa~ls~~~~-----~~~~a~~I~~iv~i~~~i~~~q 142 (902)
T PRK10517 72 EVESAREQHGENELPAQKPLPWW----VHLWVCYRNPFNILLTILGAISYATE-----DLFAAGVIALMVAISTLLNFIQ 142 (902)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHc-----cHHHHHHHHHHHHHHHHHHHHH
Confidence 34679999999999998875 56 89999999999988888888887643 2333445556677788899999
Q ss_pred HHHhhhh---hHhhcceEEEEEeC------CeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCC
Q 003364 88 DYNRYLS---DKKANEKEVWVVKQ------GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDG 158 (826)
Q Consensus 88 ~~~~~~~---~~~~~~~~~~V~r~------g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTG 158 (826)
++++.++ ++++.+.+++|+|| |++++|++++|||||||.|++||+|||||+|+++++ +.||||+|||
T Consensus 143 e~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTG 218 (902)
T PRK10517 143 EARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTG 218 (902)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCC
Confidence 9998754 56667889999999 789999999999999999999999999999995444 8999999999
Q ss_pred CCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEE
Q 003364 159 ETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238 (826)
Q Consensus 159 Es~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V 238 (826)
||.|+.|.+.+.. +.+....+.+|.+|+||.+.+| .+.++|
T Consensus 219 ES~PV~K~~~~~~--------------------------------------~~~~~~~~~~n~vfaGT~V~~G-~~~~vV 259 (902)
T PRK10517 219 ESLPVEKFATTRQ--------------------------------------PEHSNPLECDTLCFMGTNVVSG-TAQAVV 259 (902)
T ss_pred CCCceeccccccc--------------------------------------ccccCccccccceeeCceEeee-eEEEEE
Confidence 9999999754210 0111223577999999999999 799999
Q ss_pred EEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhh
Q 003364 239 VYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVI 315 (826)
Q Consensus 239 ~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (826)
++||.+|.+|++.+ ..+.+++++++.+++++.++..++++++.++++++... ..+|...+.+
T Consensus 260 ~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~---------------~~~~~~~l~~ 324 (902)
T PRK10517 260 IATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYT---------------KGDWWEAALF 324 (902)
T ss_pred EEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh---------------cCCHHHHHHH
Confidence 99999999998754 34567899999999999888777776666555443211 1234444443
Q ss_pred hhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEE
Q 003364 316 PLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR 395 (826)
Q Consensus 316 ~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~ 395 (826)
+++ ++..++|++||+++.++...++. +|.+++ +++|+++++|+||++|+||||||||||+|+|+|.+
T Consensus 325 als---v~V~~~Pe~LP~~vt~~la~g~~------~mak~~----ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~ 391 (902)
T PRK10517 325 ALS---VAVGLTPEMLPMIVTSTLARGAV------KLSKQK----VIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLEN 391 (902)
T ss_pred HHH---HHHHHcccHHHHHHHHHHHHHHH------HHHhCC----cEEecchhhhhccCCCEEEecCCCccccceEEEEE
Confidence 433 45568899998777666666554 555544 89999999999999999999999999999999988
Q ss_pred EEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEe
Q 003364 396 CCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVN 475 (826)
Q Consensus 396 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~ 475 (826)
++... + .+..+++...++|.... ...+||.|.|+++++...+.
T Consensus 392 ~~~~~---~--------------------~~~~~ll~~a~l~~~~~----------~~~~~p~d~All~~a~~~~~---- 434 (902)
T PRK10517 392 HTDIS---G--------------------KTSERVLHSAWLNSHYQ----------TGLKNLLDTAVLEGVDEESA---- 434 (902)
T ss_pred EecCC---C--------------------CCHHHHHHHHHhcCCcC----------CCCCCHHHHHHHHHHHhcch----
Confidence 63100 0 00122333333332211 11479999999999865321
Q ss_pred ecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc----CC-------ChhHHH
Q 003364 476 KNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA----GQ-------QTRTFV 544 (826)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~----~~-------~~~~~~ 544 (826)
......|+.+..+||++++|+|+++++.. ++.+.+++||+||.++++|+. +. ..+.+.
T Consensus 435 ----------~~~~~~~~~~~~~pFds~~k~msvvv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~ 503 (902)
T PRK10517 435 ----------RSLASRWQKIDEIPFDFERRRMSVVVAEN-TEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIK 503 (902)
T ss_pred ----------hhhhhcCceEEEeeeCCCcceEEEEEEEC-CCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHH
Confidence 01123466778899999999999999864 466789999999999999963 11 134566
Q ss_pred HHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHH
Q 003364 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (826)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~ 624 (826)
+..++++.+|+||+++|||.++.++.. + ....|+|++|+|+++|+||+||+++++|++
T Consensus 504 ~~~~~~a~~G~rvlavA~k~~~~~~~~-~---------------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~ 561 (902)
T PRK10517 504 RVTDTLNRQGLRVVAVATKYLPAREGD-Y---------------------QRADESDLILEGYIAFLDPPKETTAPALKA 561 (902)
T ss_pred HHHHHHHhcCCEEEEEEEecCCccccc-c---------------------ccccccCceeeehHhhhCcchhhHHHHHHH
Confidence 778889999999999999988653210 0 011368999999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHH
Q 003364 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (826)
Q Consensus 625 l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 704 (826)
|+++||+++|+|||+..+|.++|+++||... . +++|..++.
T Consensus 562 l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~--~-------------------------------------v~~G~el~~ 602 (902)
T PRK10517 562 LKASGVTVKILTGDSELVAAKVCHEVGLDAG--E-------------------------------------VLIGSDIET 602 (902)
T ss_pred HHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc--C-------------------------------------ceeHHHHHh
Confidence 9999999999999999999999999999421 1 123333322
Q ss_pred HHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccc
Q 003364 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYS 784 (826)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v 784 (826)
+.++. +.. ...+..+|+|++|+||.++|+.+|..|+.|+|+|||.||+|||+.||||||| |++.+-++++||+|
T Consensus 603 l~~~e---l~~--~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm-g~gtdvAkeaADiV 676 (902)
T PRK10517 603 LSDDE---LAN--LAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISV-DGAVDIAREAADII 676 (902)
T ss_pred CCHHH---HHH--HHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe-CCcCHHHHHhCCEE
Confidence 21111 111 1234579999999999999999999999999999999999999999999999 76655566699999
Q ss_pred cc--chhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhh
Q 003364 785 IG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824 (826)
Q Consensus 785 ~~--~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 824 (826)
+. ++..+.. .+.+||++|+|+++++.|.+..|+...+..
T Consensus 677 Lldd~~~~I~~-ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~ 717 (902)
T PRK10517 677 LLEKSLMVLEE-GVIEGRRTFANMLKYIKMTASSNFGNVFSV 717 (902)
T ss_pred EecCChHHHHH-HHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 94 4555555 467899999999999999999998655543
No 15
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2.1e-88 Score=801.21 Aligned_cols=635 Identities=21% Similarity=0.272 Sum_probs=471.8
Q ss_pred CCccccccCCCceEEeeccc-ccccccHHHHHHhhhHHHHHHHHHHHHhhccCcccc------Ccccchhhhhhhhhhhh
Q 003364 9 DDETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPV------NPASTWGPLIFIFAVSA 81 (826)
Q Consensus 9 ~~~~r~~~~g~N~i~~~~~~-~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~------~~~~~~~~l~~i~~~~~ 81 (826)
+.++|+++||+|+++.++.+ +| +.|+++|++|++++++++++++++...... ..+...+.++++++++.
T Consensus 50 ea~~rl~~~G~N~l~~~~~~~~~----~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~ 125 (903)
T PRK15122 50 DAAERLQRYGPNEVAHEKPPHAL----VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSG 125 (903)
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHH
Confidence 34679999999999987764 66 889999999999999999998887532110 11223344555667788
Q ss_pred hHHHHHHHHhhhh---hHhhcceEEEEEeCC------eEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEE
Q 003364 82 TKEAWDDYNRYLS---DKKANEKEVWVVKQG------IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVE 152 (826)
Q Consensus 82 ~~~~~~~~~~~~~---~~~~~~~~~~V~r~g------~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vd 152 (826)
++++++++++.++ ++++.+.+++|+||| ++++|++++|+|||+|.|++||+|||||+|+++++ +.||
T Consensus 126 ~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VD 201 (903)
T PRK15122 126 LLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFIS 201 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEE
Confidence 8999999988654 556677899999994 89999999999999999999999999999996544 7999
Q ss_pred cCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCc
Q 003364 153 TAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTE 232 (826)
Q Consensus 153 es~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~ 232 (826)
||+|||||.|+.|.+.+.. +....+. ...+.+....+.+|.+|+||.+.+|
T Consensus 202 ES~LTGES~PV~K~~~~~~--------------~~~~~~~--------------~~~~~~~~~~~~~n~vfaGT~V~~G- 252 (903)
T PRK15122 202 QAVLTGEALPVEKYDTLGA--------------VAGKSAD--------------ALADDEGSLLDLPNICFMGTNVVSG- 252 (903)
T ss_pred ccccCCCCcceeeeccccc--------------ccccccc--------------ccccccCCcccccceEEeCCEEEee-
Confidence 9999999999999642000 0000000 0001112223578999999999999
Q ss_pred eEEEEEEEeCCcceeeccCCCC--CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccc
Q 003364 233 WACGVAVYTGNETKLGMTRGIP--EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWY 310 (826)
Q Consensus 233 ~~~~~V~~tG~~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (826)
.+.++|++||.+|.+|++.+.. ...++++++.++++...+..++++++.+.+++.... ..+|.
T Consensus 253 ~~~~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~---------------~~~~~ 317 (903)
T PRK15122 253 TATAVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT---------------KGDWL 317 (903)
T ss_pred eEEEEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc---------------cCCHH
Confidence 7999999999999999875532 445689999999998877766665554444332111 12334
Q ss_pred hhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccce
Q 003364 311 ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENR 390 (826)
Q Consensus 311 ~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~ 390 (826)
..+.+++ .++..++|++||+++.++...+.. +|.+++ +++|++.++|+||++|+||||||||||+|+
T Consensus 318 ~~l~~ai---sl~V~~~Pe~Lp~~vt~~La~g~~------~mak~~----ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~ 384 (903)
T PRK15122 318 EALLFAL---AVAVGLTPEMLPMIVSSNLAKGAI------AMARRK----VVVKRLNAIQNFGAMDVLCTDKTGTLTQDR 384 (903)
T ss_pred HHHHHHH---HHHHHHccchHHHHHHHHHHHHHH------HHHHcC----CeecccchhhhhcCCcEEEecCCcccccCe
Confidence 4444333 345677899998777666665554 455544 899999999999999999999999999999
Q ss_pred eeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCC
Q 003364 391 MIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLH 470 (826)
Q Consensus 391 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~ 470 (826)
|+|.+++..+. .. + .+++...++| +.. +. ..+||.|.|+++++.+.+
T Consensus 385 m~V~~~~~~~~---------~~-----------~---~~~l~~a~l~-s~~----~~-----~~~~p~e~All~~a~~~~ 431 (903)
T PRK15122 385 IILEHHLDVSG---------RK-----------D---ERVLQLAWLN-SFH----QS-----GMKNLMDQAVVAFAEGNP 431 (903)
T ss_pred EEEEEEEcCCC---------CC-----------h---HHHHHHHHHh-CCC----CC-----CCCChHHHHHHHHHHHcC
Confidence 99998763211 00 0 1122222222 110 01 147999999999998765
Q ss_pred eEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC----C-------C
Q 003364 471 MVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG----Q-------Q 539 (826)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~----~-------~ 539 (826)
... ....++.+..+||++.+++|+++++.. ++++++++||+||.++++|+.- . .
T Consensus 432 ~~~--------------~~~~~~~~~~~pF~s~~k~ms~v~~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~ 496 (903)
T PRK15122 432 EIV--------------KPAGYRKVDELPFDFVRRRLSVVVEDA-QGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEAR 496 (903)
T ss_pred chh--------------hhhcCceEEEeeeCCCcCEEEEEEEcC-CCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHH
Confidence 320 122466778899999999999999864 5678999999999999999631 1 1
Q ss_pred hhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchH
Q 003364 540 TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVP 619 (826)
Q Consensus 540 ~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~ 619 (826)
++++.+..+.++.+|+||+++|||.++.++.... ..+..|+|++|+|+++|+||+||+++
T Consensus 497 ~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~--------------------~~~~~e~~l~~lGli~l~Dp~R~~a~ 556 (903)
T PRK15122 497 RERLLALAEAYNADGFRVLLVATREIPGGESRAQ--------------------YSTADERDLVIRGFLTFLDPPKESAA 556 (903)
T ss_pred HHHHHHHHHHHHhCCCEEEEEEEeccCccccccc--------------------cccccccCcEEEEEEeccCccHHHHH
Confidence 3456777889999999999999998865431100 00234689999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcC
Q 003364 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (826)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 699 (826)
++|++|+++||+++|+|||+..+|.++|+++||... . +++|
T Consensus 557 ~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~--~-------------------------------------vi~G 597 (903)
T PRK15122 557 PAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG--E-------------------------------------PLLG 597 (903)
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--C-------------------------------------ccch
Confidence 999999999999999999999999999999999421 1 1223
Q ss_pred hhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHh
Q 003364 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR 779 (826)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~ 779 (826)
..++.+.++. +.. ...+..+|+|++|+||.++|+.||..|+.|+|+|||.||+|||+.||||||| |++.+-+++
T Consensus 598 ~el~~~~~~e---l~~--~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm-g~gtdvAke 671 (903)
T PRK15122 598 TEIEAMDDAA---LAR--EVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV-DSGADIAKE 671 (903)
T ss_pred HhhhhCCHHH---HHH--HhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe-CcccHHHHH
Confidence 2222221111 111 1234679999999999999999999999999999999999999999999999 765555566
Q ss_pred hcccccc--chhcchhheeecchhhHHHHHHHHHHHhhhhHHHHH
Q 003364 780 AADYSIG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICF 822 (826)
Q Consensus 780 ~Ad~v~~--~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~ 822 (826)
+||+|+. ++..+.. .+.+||.+|+|+++++.|.+..|+...+
T Consensus 672 aADiVLldd~f~~Iv~-ai~~gR~i~~nI~k~i~~~ls~n~~~~~ 715 (903)
T PRK15122 672 SADIILLEKSLMVLEE-GVIKGRETFGNIIKYLNMTASSNFGNVF 715 (903)
T ss_pred hcCEEEecCChHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 9999994 5556666 4678999999999999999988865443
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=3.6e-88 Score=799.11 Aligned_cols=618 Identities=18% Similarity=0.231 Sum_probs=472.8
Q ss_pred CccccccCCCceEEeeccc-ccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHH
Q 003364 10 DETSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDD 88 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~~-~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~ 88 (826)
.++|+++||+|+++.++.+ +| +.++++|++|++++++++++++++.. .+...+.++++++++.+++++++
T Consensus 39 v~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~p~~~iL~~~a~ls~~~~-----~~~~~~iI~~iv~~~~~i~~~~e 109 (867)
T TIGR01524 39 VTERLAEFGPNQTVEEKKVPNL----RLLIRAFNNPFIYILAMLMGVSYLTD-----DLEATVIIALMVLASGLLGFIQE 109 (867)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH----HHHHHHHhhHHHHHHHHHHHHHHHHh-----hHHHHHHhhhHHHHHHHHHHHHH
Confidence 4679999999999998764 66 88999999999998888888887642 23334445566677888899999
Q ss_pred HHhhhh---hHhhcceEEEEEe------CCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCC
Q 003364 89 YNRYLS---DKKANEKEVWVVK------QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (826)
Q Consensus 89 ~~~~~~---~~~~~~~~~~V~r------~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGE 159 (826)
+++.++ ++++.+.+++|+| ||++++|++++|+|||||.|++||+|||||+|+++++ +.||||+||||
T Consensus 110 ~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGE 185 (867)
T TIGR01524 110 SRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGE 185 (867)
T ss_pred HHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCC
Confidence 987654 5566778999999 9999999999999999999999999999999995443 89999999999
Q ss_pred CCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEE
Q 003364 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (826)
Q Consensus 160 s~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~ 239 (826)
|.|+.|.+.+.. +.+....+.+|.+|+||.+.+| .+.++|+
T Consensus 186 S~PV~K~~~~~~--------------------------------------~~~~~~~~~~n~vfaGT~v~~G-~~~~~V~ 226 (867)
T TIGR01524 186 SLPVEKFVEDKR--------------------------------------ARDPEILERENLCFMGTNVLSG-HAQAVVL 226 (867)
T ss_pred CCcccccCCccc--------------------------------------cccccccccccceecCCeEEEe-EEEEEEE
Confidence 999999654210 0111123568999999999999 7999999
Q ss_pred EeCCcceeeccCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhh
Q 003364 240 YTGNETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPL 317 (826)
Q Consensus 240 ~tG~~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (826)
+||.+|.+|++.+. ....++++++.+++++.++..++++++++.++++.+. ..+|...+..++
T Consensus 227 ~tG~~T~~gki~~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~---------------~~~~~~~~~~al 291 (867)
T TIGR01524 227 ATGSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLM---------------KGDWLEAFLFAL 291 (867)
T ss_pred EEcCccHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHh---------------cCCHHHHHHHHH
Confidence 99999999986542 2445689999999999988887777666655443211 113334443333
Q ss_pred HHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEE
Q 003364 318 RFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCC 397 (826)
Q Consensus 318 ~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~ 397 (826)
.++..++|++||+++.++...++. +|.+++ +++|++.++|+||++|+||||||||||+|+|+|.+++
T Consensus 292 ---~l~v~~iP~~Lp~~vt~~la~g~~------~mak~~----ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~ 358 (867)
T TIGR01524 292 ---AVAVGLTPEMLPMIVSSNLAKGAI------NMSKKK----VIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI 358 (867)
T ss_pred ---HHHHHhCcchHHHHHHHHHHHHHH------HHHhCC----cEEccchhhhhccCccEEEecCCCccccCeEEEEEEe
Confidence 345678999998877777666655 555544 8999999999999999999999999999999999874
Q ss_pred EcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeec
Q 003364 398 IGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKN 477 (826)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~ 477 (826)
.... ....+++...++|+... ...+||.|.|+++++.....
T Consensus 359 ~~~~-----------------------~~~~~~l~~a~l~~~~~----------~~~~~p~~~Al~~~~~~~~~------ 399 (867)
T TIGR01524 359 DSSG-----------------------ETSERVLKMAWLNSYFQ----------TGWKNVLDHAVLAKLDESAA------ 399 (867)
T ss_pred cCCC-----------------------CCHHHHHHHHHHhCCCC----------CCCCChHHHHHHHHHHhhch------
Confidence 2100 00122333333332211 11469999999999875321
Q ss_pred CceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC-----------CChhHHHHH
Q 003364 478 ASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-----------QQTRTFVEA 546 (826)
Q Consensus 478 ~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~-----------~~~~~~~~~ 546 (826)
......++.++.+||+|++|+|+++++.. ++.+++++||+||.++++|+.. +.++++.+.
T Consensus 400 --------~~~~~~~~~~~~~pF~s~~k~ms~~v~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~ 470 (867)
T TIGR01524 400 --------RQTASRWKKVDEIPFDFDRRRLSVVVENR-AEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDM 470 (867)
T ss_pred --------hhHhhcCceEEEeccCCCcCEEEEEEEcC-CceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHH
Confidence 01123466778899999999999999864 3467899999999999999631 113467788
Q ss_pred HHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHH
Q 003364 547 VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLR 626 (826)
Q Consensus 547 ~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~ 626 (826)
++.++.+|+||+++|||.++.++.. + ....|.+++|+|+++|+||+|++++++|++|+
T Consensus 471 ~~~~a~~G~rvlavA~~~~~~~~~~-~---------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~ 528 (867)
T TIGR01524 471 TAEMNRQGIRVIAVATKTLKVGEAD-F---------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALF 528 (867)
T ss_pred HHHHHhcCCEEEEEEEeccCccccc-c---------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHH
Confidence 8999999999999999998754210 0 01235799999999999999999999999999
Q ss_pred HcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHH
Q 003364 627 KAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIAL 706 (826)
Q Consensus 627 ~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 706 (826)
++||+++|+|||+..+|.++|+++||.... +++|..++...
T Consensus 529 ~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~---------------------------------------v~~g~~l~~~~ 569 (867)
T TIGR01524 529 KNGINVKVLTGDNEIVTARICQEVGIDAND---------------------------------------FLLGADIEELS 569 (867)
T ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCCCCC---------------------------------------eeecHhhhhCC
Confidence 999999999999999999999999995321 11222222111
Q ss_pred HHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccccc
Q 003364 707 KHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG 786 (826)
Q Consensus 707 ~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~ 786 (826)
++ .+. ....+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||+.||||||| |++.+-++++||+|+.
T Consensus 570 ~~---el~--~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAm-g~gtdvAk~aADiVLl 643 (867)
T TIGR01524 570 DE---ELA--RELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV-DTAADIAKEASDIILL 643 (867)
T ss_pred HH---HHH--HHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEe-CCccHHHHHhCCEEEe
Confidence 10 011 11234679999999999999999999999999999999999999999999999 7655555669999994
Q ss_pred --chhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHh
Q 003364 787 --KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823 (826)
Q Consensus 787 --~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~ 823 (826)
++..+.. .+.+||.+|+|+++++.|.+..|+...+.
T Consensus 644 dd~~~~I~~-ai~~gR~i~~ni~k~i~~~ls~n~~~~~~ 681 (867)
T TIGR01524 644 EKSLMVLEE-GVIEGRNTFGNILKYLKMTASSNFGNVFS 681 (867)
T ss_pred cCChHHHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 4555555 46789999999999999999888765544
No 17
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=4.2e-88 Score=788.76 Aligned_cols=595 Identities=22% Similarity=0.232 Sum_probs=468.3
Q ss_pred CccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHH
Q 003364 10 DETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDY 89 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 89 (826)
.++|+++||+|+++.+++++| ..|+++|++|+++.++++++++++.. .+.....++++++++..+++++++
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~~-----~~~~~~~i~~~~~i~~~i~~~qe~ 77 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIALE-----NWVDFVIILGLLLLNATIGFIEEN 77 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhhc-----chhhhhhhhhhhHHHHHHHHHHHH
Confidence 467999999999998666666 78999999999988888888887653 222334455566677788999999
Q ss_pred Hhhhh---hHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCce-EEEEcCCCCCCCCceee
Q 003364 90 NRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV-CYVETAALDGETDLKTR 165 (826)
Q Consensus 90 ~~~~~---~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~-~~Vdes~lTGEs~p~~K 165 (826)
++.++ ++++.+++++|+|||++++|++++|+|||||.|++||+|||||+|+ +|. +.||||+|||||.|+.|
T Consensus 78 ~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi-----~g~~~~VDeS~LTGES~PV~K 152 (755)
T TIGR01647 78 KAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLF-----EGDYIQVDQAALTGESLPVTK 152 (755)
T ss_pred HHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEE-----ecCceEEEcccccCCccceEe
Confidence 87664 4556788999999999999999999999999999999999999999 554 99999999999999999
Q ss_pred eccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcc
Q 003364 166 LIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNET 245 (826)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T 245 (826)
..+|.+|+||.+.+| .+.++|++||.+|
T Consensus 153 ---------------------------------------------------~~~~~v~aGT~v~~G-~~~~~V~~tG~~T 180 (755)
T TIGR01647 153 ---------------------------------------------------KTGDIAYSGSTVKQG-EAEAVVTATGMNT 180 (755)
T ss_pred ---------------------------------------------------ccCCeeeccCEEEcc-EEEEEEEEcCCcc
Confidence 346789999999999 7999999999999
Q ss_pred eeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHH
Q 003364 246 KLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (826)
Q Consensus 246 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (826)
.+|++.+ ..+.+++++++.+++++.++.+++++++++.+++++... ..+|...+..++ .+
T Consensus 181 ~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~--------------~~~~~~~~~~~i---~v 243 (755)
T TIGR01647 181 FFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGR--------------GESFREGLQFAL---VL 243 (755)
T ss_pred HHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------------CCCHHHHHHHHH---HH
Confidence 9998644 445567899999999999888877777766655543211 112333333222 35
Q ss_pred hcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCee
Q 003364 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF 402 (826)
Q Consensus 323 ~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~ 402 (826)
+..++|++||+++.++...+.. +|.+++ +++|+++++|+||++|++|||||||||+|+|.|.+++..+..
T Consensus 244 lv~a~P~~Lp~~~~~~la~g~~------r~ak~g----ilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~ 313 (755)
T TIGR01647 244 LVGGIPIAMPAVLSVTMAVGAA------ELAKKK----AIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG 313 (755)
T ss_pred HHHhCCcchHHHHHHHHHHHHH------HHHhCC----eEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC
Confidence 6678999998877777666665 555544 899999999999999999999999999999999998754210
Q ss_pred ecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEE
Q 003364 403 YGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILE 482 (826)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~ 482 (826)
+ +..+++...++|+. ..++||.|.|+++++.+.+.
T Consensus 314 ~----------------------~~~~~l~~a~~~~~------------~~~~~pi~~Ai~~~~~~~~~----------- 348 (755)
T TIGR01647 314 F----------------------DKDDVLLYAALASR------------EEDQDAIDTAVLGSAKDLKE----------- 348 (755)
T ss_pred C----------------------CHHHHHHHHHHhCC------------CCCCChHHHHHHHHHHHhHH-----------
Confidence 0 11233444444432 11479999999998875430
Q ss_pred EEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC-CChhHHHHHHHHHHHcCCeEEEEE
Q 003364 483 IKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-QQTRTFVEAVEQYSQLGLRTLCLA 561 (826)
Q Consensus 483 ~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~-~~~~~~~~~~~~~~~~G~rvl~~A 561 (826)
....+++++.+||++.+|+|+++++..++++.++++||+||.++++|+.. ..++++.+.+++++.+|+||+++|
T Consensus 349 -----~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA 423 (755)
T TIGR01647 349 -----ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVA 423 (755)
T ss_pred -----HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEE
Confidence 12236677889999999999999987655778889999999999999743 335678888999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChh
Q 003364 562 WREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQN 641 (826)
Q Consensus 562 ~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~ 641 (826)
||.. |.+++|+|+++|+||+||+++++|++|+++|++++|+|||+..
T Consensus 424 ~~~~---------------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~ 470 (755)
T TIGR01647 424 RTDE---------------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLA 470 (755)
T ss_pred EEcC---------------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHH
Confidence 9721 3689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHH-HHHHHHHhhhcccc
Q 003364 642 TAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIAL-KHYRKAFTELAILS 720 (826)
Q Consensus 642 ~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~~~~~~~~~~~~~ 720 (826)
+|.++|+++||...... +... .++...+.+. +++.+. ..
T Consensus 471 tA~~IA~~lGI~~~~~~-------~~~l---------------------------~~~~~~~~~~~~~~~~~------~~ 510 (755)
T TIGR01647 471 IAKETARRLGLGTNIYT-------ADVL---------------------------LKGDNRDDLPSGELGEM------VE 510 (755)
T ss_pred HHHHHHHHcCCCCCCcC-------HHHh---------------------------cCCcchhhCCHHHHHHH------HH
Confidence 99999999999542110 0000 0000000000 001111 22
Q ss_pred ceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc--hhcchhheeec
Q 003364 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRLILVH 798 (826)
Q Consensus 721 ~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~--~~~l~~l~l~~ 798 (826)
+..+|+|++|+||.++|+.+|..|+.|+|+|||.||+|+|+.||||||| +++.+-++++||+|+.+ +..+.. .+.+
T Consensus 511 ~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm-~~gtdvAkeaADivLl~d~l~~I~~-ai~~ 588 (755)
T TIGR01647 511 DADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV-AGATDAARSAADIVLTEPGLSVIVD-AILE 588 (755)
T ss_pred hCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe-cCCcHHHHHhCCEEEEcCChHHHHH-HHHH
Confidence 3569999999999999999999999999999999999999999999999 77666566699999954 455555 4668
Q ss_pred chhhHHHHHHHHHHHhhhhHHHHH
Q 003364 799 GRYSYNRTAFLSQYSFYKSLLICF 822 (826)
Q Consensus 799 gr~~~~~~~~~~~~~~~~~~~~~~ 822 (826)
||.+|+|+++++.|.+..|+...+
T Consensus 589 gR~~~~ni~k~i~~~~~~n~~~~~ 612 (755)
T TIGR01647 589 SRKIFQRMKSYVIYRIAETIRIVF 612 (755)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHH
Confidence 999999999999999999986544
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-86 Score=723.67 Aligned_cols=704 Identities=20% Similarity=0.260 Sum_probs=507.9
Q ss_pred ccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHHH
Q 003364 11 ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (826)
Q Consensus 11 ~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 90 (826)
..|+.-||+|.+..+.++.+ .+++++..+|+.+|..+..++|.. .+++++...++++.+.|.....|+..+
T Consensus 167 ~~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~-----d~Y~~YA~cI~iisv~Si~~sv~e~r~ 237 (1140)
T KOG0208|consen 167 IDRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA-----DSYYYYAFCIVIISVYSIVLSVYETRK 237 (1140)
T ss_pred HhHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc-----ccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 34889999999999999987 889999999985555444444332 233334445555666677778888777
Q ss_pred hhhhhHhhc--ceEEEEEeCCeEEEEEeecCccccEEEeeC-CCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeec
Q 003364 91 RYLSDKKAN--EKEVWVVKQGIKKLIQSQDIRVGNIVWLRE-NDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (826)
Q Consensus 91 ~~~~~~~~~--~~~~~V~r~g~~~~i~~~~l~~GDII~l~~-G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~ 167 (826)
..+..+++- ...|+|+|+|.|++|.++|||||||+.+.+ |-..|||++|+ +|+|.||||+|||||+|+.|.|
T Consensus 238 qs~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li-----~g~civNEsmLTGESVPv~K~~ 312 (1140)
T KOG0208|consen 238 QSIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLI-----SGDCIVNESMLTGESVPVTKTP 312 (1140)
T ss_pred HHHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEE-----eCcEEeecccccCCcccccccC
Confidence 666666654 457899999999999999999999999998 99999999999 8999999999999999999987
Q ss_pred cccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeec-----CceEEEEEEEeC
Q 003364 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN-----TEWACGVAVYTG 242 (826)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~-----g~~~~~~V~~tG 242 (826)
.+.-.+.. + + .........+|++|.||.+.+ |+.+.++|++||
T Consensus 313 l~~~~~~~-------------~--------~-----------~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTG 360 (1140)
T KOG0208|consen 313 LPMGTDSL-------------D--------S-----------ITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTG 360 (1140)
T ss_pred CccccccC-------------c--------C-----------eeechhhcCcceeeccceEEEeecCCCCceEEEEEecc
Confidence 64100000 0 0 001111246789999999866 447899999999
Q ss_pred CcceeeccCC-CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHH
Q 003364 243 NETKLGMTRG-IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFEL 321 (826)
Q Consensus 243 ~~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (826)
.+|..|++.+ ...+|..+++.+-|.+..+.++..+.++.++..+..... .+.+.... .++-+.
T Consensus 361 F~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~-------------~g~~~~~i---iirsLD 424 (1140)
T KOG0208|consen 361 FSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNL-------------LGVPLKTI---IIRSLD 424 (1140)
T ss_pred ccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHH-------------cCCCHHHH---hhhhhc
Confidence 9999999765 467777777777776654444443333322222211110 11122222 245556
Q ss_pred HhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCe
Q 003364 322 LCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGI 401 (826)
Q Consensus 322 l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~ 401 (826)
+++..+|++||.++++....... ++++++ |.|.++..+...|++|++|||||||||++.+.+-.+..-..
T Consensus 425 liTi~VPPALPAaltvG~~~a~~------RLkkk~----IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~ 494 (1140)
T KOG0208|consen 425 LITIVVPPALPAALTVGIIYAQS------RLKKKG----IFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVER 494 (1140)
T ss_pred EEEEecCCCchhhhhHHHHHHHH------HHHhcC----eEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccc
Confidence 88999999999988887666544 455544 99999999999999999999999999999999988875321
Q ss_pred e-ecCCC-CCcccc--hhhhh-hhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEee
Q 003364 402 F-YGNET-GDALKD--VGLLN-AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNK 476 (826)
Q Consensus 402 ~-~~~~~-~~~~~~--~~~~~-~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~ 476 (826)
. ..... .....+ ..... ..+........+..+++.||++..... .+ .|||.|.-+.++.. +.++..
T Consensus 495 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g---~l---~GDPLdlkmfe~t~---w~~ee~ 565 (1140)
T KOG0208|consen 495 NVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDG---TL---VGDPLDLKMFESTG---WVYEEA 565 (1140)
T ss_pred cccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCC---ee---ccCceeeeeeeccc---eEEEec
Confidence 1 00000 000000 00000 011112235678899999999886643 22 57888887777554 334221
Q ss_pred c---C----------ceEEEE---eCCe----EEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc
Q 003364 477 N---A----------SILEIK---FNGS----VLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA 536 (826)
Q Consensus 477 ~---~----------~~~~~~---~~~~----~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~ 536 (826)
+ + ..+... .++. ...+.+++.+||+|..+||||||+.+.+++..+|+|||||.|...|++
T Consensus 566 ~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p 645 (1140)
T KOG0208|consen 566 DIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP 645 (1140)
T ss_pred cccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc
Confidence 1 0 001110 1111 126999999999999999999999998899999999999999999999
Q ss_pred CCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCC
Q 003364 537 GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQD 616 (826)
Q Consensus 537 ~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~ 616 (826)
++.|.++++.++.|+.+|+||||+|+|.++... |.+.. .-.++.+|+||+|+|++.|++++++
T Consensus 646 ~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~---~~~~~--------------~~~Rd~vEs~l~FlGLiVmeNkLK~ 708 (1140)
T KOG0208|consen 646 ETVPADYQEVLKEYTHQGFRVIALASKELETST---LQKAQ--------------KLSRDTVESNLEFLGLIVMENKLKE 708 (1140)
T ss_pred ccCCccHHHHHHHHHhCCeEEEEEecCccCcch---HHHHh--------------hccHhhhhccceeeEEEEeeccccc
Confidence 999999999999999999999999999998762 22111 1234789999999999999999999
Q ss_pred chHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHH-------HHHHH-------HHH
Q 003364 617 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCR-------SLERV-------LLT 682 (826)
Q Consensus 617 ~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-------~~~ 682 (826)
.++.+|++|++++|+++|+|||+..||..+|++||++.+.....+...+..+.+.... ..... .+.
T Consensus 709 ~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~ 788 (1140)
T KOG0208|consen 709 ETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDL 788 (1140)
T ss_pred ccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccc
Confidence 9999999999999999999999999999999999999886542222332111111000 00000 000
Q ss_pred c----ccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHH
Q 003364 683 M----RITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVR 758 (826)
Q Consensus 683 ~----~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ 758 (826)
. .........+.+.++|+.+..+.++..+.++.+ ..+..+|||++|.||.++|+.+|+.+..|+|||||.||+.
T Consensus 789 ~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~I--l~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCg 866 (1140)
T KOG0208|consen 789 ASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKI--LLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCG 866 (1140)
T ss_pred cCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHH--HhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhh
Confidence 0 001123456889999999999997777777765 3567899999999999999999999999999999999999
Q ss_pred hHHhCCccEEecCCchHHHHhhcccccc--chhcchhheeecchhhHHHHHHHHHHHhhhhH
Q 003364 759 MIQKADIGVGISGREGLQAARAADYSIG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSL 818 (826)
Q Consensus 759 ml~~A~vgIam~gn~~~~~~~~Ad~v~~--~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~ 818 (826)
|||+||+||+++.+ ++.-+|.+... +.+..-. ++.|||+.+--.-..++|+-.+++
T Consensus 867 ALKaAdvGISLSea---EASvAApFTSk~~~I~cVp~-vIrEGRaALVTSf~~FkYMalYs~ 924 (1140)
T KOG0208|consen 867 ALKAADVGISLSEA---EASVAAPFTSKTPSISCVPD-VIREGRAALVTSFACFKYMALYSA 924 (1140)
T ss_pred hhhhcccCcchhhh---hHhhcCccccCCCchhhHhH-HHhhhhhhhhhhHHHHHHHHHHHH
Confidence 99999999999432 35568888775 4455555 577999998877777777655544
No 19
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-80 Score=666.29 Aligned_cols=687 Identities=22% Similarity=0.241 Sum_probs=525.5
Q ss_pred eCCCccccccCCCceEEeecccc-cccccHHHHHHhhhHHHHHHHHHHHHhhccCccccC--------cccchhhhhhhh
Q 003364 7 INDDETSQDLYCANRLSNRKYTL-MNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN--------PASTWGPLIFIF 77 (826)
Q Consensus 7 ~~~~~~r~~~~g~N~i~~~~~~~-~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~--------~~~~~~~l~~i~ 77 (826)
...+-+++.+-|+|.++.|+.+. | ..|.+|++..+.+.+++.++++++.+..... ..+.-+.+..++
T Consensus 61 ~~~A~~~L~rdG~NaL~Ppk~t~~w----ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv 136 (1019)
T KOG0203|consen 61 SQEAAEKLARDGPNALTPPKTTPEW----IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVV 136 (1019)
T ss_pred HHHHHhhhccCCCCCCCCCCCChHH----HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEE
Confidence 33445689999999999998753 4 6688999998888888888887754322111 112224444555
Q ss_pred hhhhhHHHHHHHHhh---hhhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcC
Q 003364 78 AVSATKEAWDDYNRY---LSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETA 154 (826)
Q Consensus 78 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes 154 (826)
++..+..++++.+.. .+.+.+.|+.|+|+|||+...+.+++|||||++.++-|++||||.+++++.+ |+||+|
T Consensus 137 ~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdns 212 (1019)
T KOG0203|consen 137 IVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNS 212 (1019)
T ss_pred EEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecc
Confidence 666777788877753 4567788999999999999999999999999999999999999999999988 999999
Q ss_pred CCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceE
Q 003364 155 ALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWA 234 (826)
Q Consensus 155 ~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~ 234 (826)
+|||||.|..+.+.. +...+++..|+.|.+|.+.+| .+
T Consensus 213 slTGesEP~~~~~~~-----------------------------------------t~~~~~Et~Ni~f~st~~veG-~~ 250 (1019)
T KOG0203|consen 213 SLTGESEPQTRSPEF-----------------------------------------THENPLETRNIAFFSTNCVEG-TG 250 (1019)
T ss_pred ccccccCCccCCccc-----------------------------------------cccCchhheeeeeeeeEEecc-eE
Confidence 999999999885431 112236789999999999999 79
Q ss_pred EEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccch
Q 003364 235 CGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYE 311 (826)
Q Consensus 235 ~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (826)
+|+|++||.+|.+|++.. ..+..++++++.++++..++...++++.+.++++..... ..|..
T Consensus 251 ~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g---------------y~~l~ 315 (1019)
T KOG0203|consen 251 RGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG---------------YEWLR 315 (1019)
T ss_pred EEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc---------------chhHH
Confidence 999999999999999866 356788999999999999888888777776665443221 12333
Q ss_pred hhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCccccccee
Q 003364 312 LLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRM 391 (826)
Q Consensus 312 ~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~ 391 (826)
.+++ ++.++...+|.+|++++.....+-++ +|.+++ +++|++.+.|+||..++||+|||||||+|+|
T Consensus 316 avv~---~i~iivAnvPeGL~~tvTv~Ltltak------rMa~Kn----c~vknLeavetlGsts~I~SDktGTlTqnrM 382 (1019)
T KOG0203|consen 316 AVVF---LIGIIVANVPEGLLATVTVCLTLTAK------RMARKN----CLVKNLEAVETLGSTSTICSDKTGTLTQNRM 382 (1019)
T ss_pred Hhhh---hheeEEecCcCCccceehhhHHHHHH------HHhhce----eEEeeeeheeecccceeEeecceeeEEecce
Confidence 3322 33467788999999888877777766 676666 8999999999999999999999999999999
Q ss_pred eEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCcee---eecCCccHHHHHHHHHh
Q 003364 392 IFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAIL---YKAQSQDEEALVHAAAQ 468 (826)
Q Consensus 392 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~---~~~~~~~e~all~~a~~ 468 (826)
+|.++|.++.....+... .+........++....+.++..+||.+.....+++... -..|++.|.||++|+.-
T Consensus 383 tVahlw~d~~i~~~d~~~----~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~ 458 (1019)
T KOG0203|consen 383 TVAHLWFDNQIHEADTTE----DQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIEL 458 (1019)
T ss_pred EEEeeccCCceeeeechh----hhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHH
Confidence 999999988766544321 11111222346778899999999999887655443222 12689999999999975
Q ss_pred CCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecC--CCeEEEEecCchhhhhhhhhc----------
Q 003364 469 LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHA---------- 536 (826)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~--~~~~~~~~KGa~e~i~~~~~~---------- 536 (826)
.-.. ....++.++.+...||+|.+|+...+.+..+ +.++.+.+|||||.++++|+.
T Consensus 459 ~~~~------------~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pl 526 (1019)
T KOG0203|consen 459 ILGS------------VMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPL 526 (1019)
T ss_pred hcch------------HHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCc
Confidence 3211 1234567788899999999999988887542 357889999999999999972
Q ss_pred -CCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccC
Q 003364 537 -GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQ 615 (826)
Q Consensus 537 -~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~ 615 (826)
.+..+.+.+....+...|-||++||++.++++++++.....- ... ...-.++.|+|++++-||+|
T Consensus 527 d~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~---d~~-----------n~p~~nl~FlGl~s~idPPR 592 (1019)
T KOG0203|consen 527 DEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDT---DDV-----------NFPTDNLRFLGLISMIDPPR 592 (1019)
T ss_pred CHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeec---CCC-----------CCcchhccccchhhccCCCc
Confidence 122356778888899999999999999999887664322110 000 12225899999999999999
Q ss_pred CchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEE
Q 003364 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695 (826)
Q Consensus 616 ~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 695 (826)
..+++|+.+|+.+||+++|+|||++-+|.++|+..||+..... ..++.. .+. ...-.........+.
T Consensus 593 ~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~e---------t~e~~a---~r~-~~~v~~vn~~~a~a~ 659 (1019)
T KOG0203|consen 593 AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSE---------TVEDIA---KRL-NIPVEQVNSRDAKAA 659 (1019)
T ss_pred ccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCch---------hhhhhH---Hhc-CCcccccCccccceE
Confidence 9999999999999999999999999999999999998654321 111110 000 000011112224677
Q ss_pred EEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchH
Q 003364 696 VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (826)
Q Consensus 696 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (826)
++.|.++..+..... +++.......+|+|.+|+||..||+..|+.|..|.++|||.||.||||.||+|||| |-+++
T Consensus 660 VihG~eL~~~~~~ql---d~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAM-GiaGS 735 (1019)
T KOG0203|consen 660 VIHGSELPDMSSEQL---DELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GIAGS 735 (1019)
T ss_pred EEecccccccCHHHH---HHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceee-ccccc
Confidence 888887766544332 22333455689999999999999999999999999999999999999999999999 88888
Q ss_pred HHHh-hccccccc--hhcchhheeecchhhHHHHHHHHHHHhhhhHH
Q 003364 776 QAAR-AADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLL 819 (826)
Q Consensus 776 ~~~~-~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~ 819 (826)
++.+ +||+++.+ |..+.. ..-+||.+|+|++|.+.|.+..|+-
T Consensus 736 DvsKqAADmILLDDNFASIVt-GVEEGRLiFDNLKKsIAYTLTsNip 781 (1019)
T KOG0203|consen 736 DVSKQAADMILLDDNFASIVT-GVEEGRLIFDNLKKSIAYTLTSNIP 781 (1019)
T ss_pred hHHHhhcceEEecCcchhhee-ecccceehhhhHHHHHHHHHHhcch
Confidence 8877 99999944 344443 4568999999999999999999974
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=6e-75 Score=653.27 Aligned_cols=535 Identities=18% Similarity=0.216 Sum_probs=396.7
Q ss_pred HHHhhhHHHHHHHHHHHHhhccCcccc-----Cc-ccchhhhhhhhhhhhh----HHHHHHHHhhhh---hHhhcce-EE
Q 003364 38 WEQFSRFMNQYFLLIACLQLWSLITPV-----NP-ASTWGPLIFIFAVSAT----KEAWDDYNRYLS---DKKANEK-EV 103 (826)
Q Consensus 38 ~~~~~~~~n~~~l~~~~l~~~~~~~~~-----~~-~~~~~~l~~i~~~~~~----~~~~~~~~~~~~---~~~~~~~-~~ 103 (826)
..+|++|+.+.+++.++++++...... .+ ..+.+.++++++++.+ .|.+.++|..++ ++++.++ ++
T Consensus 27 ~~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 27 VYMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 356688998888888888875432211 11 0111222233333333 344446665444 4555554 67
Q ss_pred E-EEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccCCCHhhhccc
Q 003364 104 W-VVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKI 182 (826)
Q Consensus 104 ~-V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~ 182 (826)
+ |.|||++++|++++|+|||+|.|++||+|||||+++ +|.+.||||+|||||.|+.|.+..
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vi-----eG~~~VDESaLTGES~PV~K~~g~------------- 168 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVI-----KGLATVDESAITGESAPVIKESGG------------- 168 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEE-----EcceEEecchhcCCCCceeccCCC-------------
Confidence 6 679999999999999999999999999999999999 777999999999999999995320
Q ss_pred eEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCC---CCCCccc
Q 003364 183 KGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLT 259 (826)
Q Consensus 183 ~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~ 259 (826)
+. +.+++||.+.+| ++.++|+++|.+|.+|++.+ ..+.+++
T Consensus 169 ----------------------------------d~-~~V~aGT~v~~G-~~~i~Vta~g~~T~lgki~~lve~a~~~kt 212 (673)
T PRK14010 169 ----------------------------------DF-DNVIGGTSVASD-WLEVEITSEPGHSFLDKMIGLVEGATRKKT 212 (673)
T ss_pred ----------------------------------cc-CeeecCceeecc-eEEEEEEEecccCHHHHHHHHHhhccccCC
Confidence 11 349999999999 89999999999999998644 4556778
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHHhcccccceehhhHHHHH
Q 003364 260 AVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVK 339 (826)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~ 339 (826)
|+|.....+...+..+.+ +++.++.. +. .| . .+...+.+.+ .++..++|++|+..+++..
T Consensus 213 p~e~~l~~l~~~l~ii~l--~~~~~~~~--~~-------~~----~--~~~~~~~~~v---al~V~~IP~aL~~~~~~~~ 272 (673)
T PRK14010 213 PNEIALFTLLMTLTIIFL--VVILTMYP--LA-------KF----L--NFNLSIAMLI---ALAVCLIPTTIGGLLSAIG 272 (673)
T ss_pred HHHHHHHHHHHHHhHHHH--HHHHHHHH--HH-------hh----c--cHHHHHHHHH---HHHHHhhhhhHHHHHHHHH
Confidence 998766554433222111 11111110 00 00 0 1111111111 2334457998887776665
Q ss_pred HHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCcccchhhhhh
Q 003364 340 SLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNA 419 (826)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 419 (826)
..++. +|.+.+ +++|++.++|+||++|++|||||||||+|++.+..+...+
T Consensus 273 ~~g~~------r~ak~g----vLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~------------------- 323 (673)
T PRK14010 273 IAGMD------RVTQFN----ILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK------------------- 323 (673)
T ss_pred HHHHH------HHhhCC----EEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-------------------
Confidence 55554 555554 9999999999999999999999999999887776643210
Q ss_pred hccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeec
Q 003364 420 ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLE 499 (826)
Q Consensus 420 ~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 499 (826)
..+..+++.....|+.. +.||.++|+++++++.++... .......|
T Consensus 324 ----~~~~~~ll~~a~~~~~~-------------s~~P~~~AIv~~a~~~~~~~~-----------------~~~~~~~p 369 (673)
T PRK14010 324 ----SSSFERLVKAAYESSIA-------------DDTPEGRSIVKLAYKQHIDLP-----------------QEVGEYIP 369 (673)
T ss_pred ----CccHHHHHHHHHHhcCC-------------CCChHHHHHHHHHHHcCCCch-----------------hhhcceec
Confidence 01223455556666532 359999999999987664321 00112479
Q ss_pred cCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC--CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHH
Q 003364 500 FTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 577 (826)
Q Consensus 500 f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~--~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~ 577 (826)
|++++++|++.++ ++ .+.||+|+.++++|... ..+.++.+..++++++|+|+++++
T Consensus 370 F~~~~k~~gv~~~----g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~---------------- 427 (673)
T PRK14010 370 FTAETRMSGVKFT----TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL---------------- 427 (673)
T ss_pred cccccceeEEEEC----CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE----------------
Confidence 9999999998752 32 45699999999999742 234567778889999999999987
Q ss_pred HHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCC
Q 003364 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP 657 (826)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~ 657 (826)
.|++++|+++++|++||+++++|++||++|++++|+|||+..+|.++|+++|+
T Consensus 428 ----------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI----- 480 (673)
T PRK14010 428 ----------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV----- 480 (673)
T ss_pred ----------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC-----
Confidence 58899999999999999999999999999999999999999999999999998
Q ss_pred CCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHH
Q 003364 658 KGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV 737 (826)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv 737 (826)
..++++++|+||.++|
T Consensus 481 ----------------------------------------------------------------~~v~A~~~PedK~~iV 496 (673)
T PRK14010 481 ----------------------------------------------------------------DRFVAECKPEDKINVI 496 (673)
T ss_pred ----------------------------------------------------------------ceEEcCCCHHHHHHHH
Confidence 3478899999999999
Q ss_pred HHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc--hhcchhheeecchhhHHHHHHHHHHHhh
Q 003364 738 ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYSFY 815 (826)
Q Consensus 738 ~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~~ 815 (826)
+.+|..++.|+|+|||.||+|+|+.||||||| |++.+-++++||+|+.+ +..+.+ .+.+||.+|.|+++++.|++.
T Consensus 497 ~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM-gsGTdvAkeAADiVLldd~ls~Iv~-av~~gR~i~~n~~~~~~f~~~ 574 (673)
T PRK14010 497 REEQAKGHIVAMTGDGTNDAPALAEANVGLAM-NSGTMSAKEAANLIDLDSNPTKLME-VVLIGKQLLMTRGSLTTFSIA 574 (673)
T ss_pred HHHHhCCCEEEEECCChhhHHHHHhCCEEEEe-CCCCHHHHHhCCEEEcCCCHHHHHH-HHHHHHHHHHHHHHHHheeee
Confidence 99999999999999999999999999999999 76666666699999954 445554 456799999999999999999
Q ss_pred hhHHHHHhh
Q 003364 816 KSLLICFIQ 824 (826)
Q Consensus 816 ~~~~~~~~~ 824 (826)
.|+.-.|..
T Consensus 575 ~~~~~~~~i 583 (673)
T PRK14010 575 NDIAKYFAI 583 (673)
T ss_pred ccHHHHHHH
Confidence 998766654
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=9.9e-74 Score=644.06 Aligned_cols=535 Identities=20% Similarity=0.208 Sum_probs=404.8
Q ss_pred HHHHhhhHHHHHHHHHHHHhhccCcccc------Ccccchhh---hhhhhhhhhhHHHHHHHHhhhh---hHhhcce-EE
Q 003364 37 LWEQFSRFMNQYFLLIACLQLWSLITPV------NPASTWGP---LIFIFAVSATKEAWDDYNRYLS---DKKANEK-EV 103 (826)
Q Consensus 37 l~~~~~~~~n~~~l~~~~l~~~~~~~~~------~~~~~~~~---l~~i~~~~~~~~~~~~~~~~~~---~~~~~~~-~~ 103 (826)
-..||++|+.+.+++.++++++..+... .+...|.. +++.+++..+.+.++++|..++ ++++.+. ++
T Consensus 27 ~~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a 106 (679)
T PRK01122 27 PRVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFA 106 (679)
T ss_pred HHHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 4467889998888888888876543211 12223322 2223344556677788776654 4555554 79
Q ss_pred EEEeCCe-EEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccCCCHhhhccc
Q 003364 104 WVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKI 182 (826)
Q Consensus 104 ~V~r~g~-~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~ 182 (826)
+|+|||+ +++|++++|+|||+|.|++||+|||||+++ +|.+.||||+|||||.|+.|.+..
T Consensus 107 ~vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vi-----eG~a~VDESaLTGES~PV~K~~G~------------- 168 (679)
T PRK01122 107 RKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVI-----EGVASVDESAITGESAPVIRESGG------------- 168 (679)
T ss_pred EEEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEE-----EccEEEEcccccCCCCceEeCCCC-------------
Confidence 9999998 999999999999999999999999999999 777999999999999999995431
Q ss_pred eEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCC---CCCCccc
Q 003364 183 KGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLT 259 (826)
Q Consensus 183 ~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~ 259 (826)
..+.+++||.+.+| ++.+.|+++|.+|.++++.+ ..+.+++
T Consensus 169 -----------------------------------~~~~V~aGT~v~~G-~~~i~Vta~g~~S~lgki~~lve~a~~~kt 212 (679)
T PRK01122 169 -----------------------------------DFSSVTGGTRVLSD-WIVIRITANPGESFLDRMIALVEGAKRQKT 212 (679)
T ss_pred -----------------------------------ccCeEEeceEEEee-eEEEEEEEecccCHHHHHHHHHHhccccCC
Confidence 11239999999999 89999999999999998643 4556679
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHHhcccccceehhhHHHHH
Q 003364 260 AVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVK 339 (826)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~ 339 (826)
|++...+.+...++.+.++++++++.++ ||. ...+ .+.+ .+.++..++|++++..+.+..
T Consensus 213 p~e~al~~l~~~l~~i~l~~~~~~~~~~-----------~~~----g~~~--~l~~---~iallV~aiP~alg~l~~~i~ 272 (679)
T PRK01122 213 PNEIALTILLAGLTIIFLLVVATLPPFA-----------AYS----GGAL--SITV---LVALLVCLIPTTIGGLLSAIG 272 (679)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHH-----------HHh----CchH--HHHH---HHHHHHHcccchhhhHHHHHH
Confidence 9998888776655544443333222221 111 0111 1111 123466789998765555554
Q ss_pred HHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCcccchhhhhh
Q 003364 340 SLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNA 419 (826)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 419 (826)
..++. +|.+.+ +++|++.++|.||++|++|||||||||+|+|++.+++..+.
T Consensus 273 i~g~~------r~ak~g----vLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~------------------ 324 (679)
T PRK01122 273 IAGMD------RVLQAN----VIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG------------------ 324 (679)
T ss_pred HHHHH------HHhcCC----eeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC------------------
Confidence 44444 455544 99999999999999999999999999999999998764211
Q ss_pred hccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHh-CCeEEEeecCceEEEEeCCeEEEEEEEEee
Q 003364 420 ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ-LHMVLVNKNASILEIKFNGSVLQYEILETL 498 (826)
Q Consensus 420 ~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 498 (826)
.+..+++.+.+.|+.. ..||..+|+++++++ .+... ....+...+..
T Consensus 325 -----~~~~~ll~~a~~~s~~-------------s~hP~~~AIv~~a~~~~~~~~--------------~~~~~~~~~~~ 372 (679)
T PRK01122 325 -----VTEEELADAAQLSSLA-------------DETPEGRSIVVLAKQRFNLRE--------------RDLQSLHATFV 372 (679)
T ss_pred -----CCHHHHHHHHHHhcCC-------------CCCchHHHHHHHHHhhcCCCc--------------hhhccccceeE
Confidence 0112345555566532 257999999999976 33211 01113456778
Q ss_pred ccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC--CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHHH
Q 003364 499 EFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLM 576 (826)
Q Consensus 499 ~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~--~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~ 576 (826)
||++.+++|++.++ + ..|+||++|.+++.|... ..++++++.+++++++|.|++++|
T Consensus 373 pF~s~~~~~gv~~~----g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va--------------- 431 (679)
T PRK01122 373 PFSAQTRMSGVDLD----G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA--------------- 431 (679)
T ss_pred eecCcCceEEEEEC----C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEE---------------
Confidence 99999888887542 3 578999999999999642 235678888999999999999999
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC
Q 003364 577 FKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656 (826)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~ 656 (826)
.|++++|+++++|++||+++++|++||++||+++|+|||++.+|.++|+++|+
T Consensus 432 -----------------------~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI---- 484 (679)
T PRK01122 432 -----------------------EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV---- 484 (679)
T ss_pred -----------------------ECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC----
Confidence 47899999999999999999999999999999999999999999999999998
Q ss_pred CCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHH
Q 003364 657 PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQL 736 (826)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~i 736 (826)
..++++++|+||.++
T Consensus 485 -----------------------------------------------------------------d~v~A~~~PedK~~i 499 (679)
T PRK01122 485 -----------------------------------------------------------------DDFLAEATPEDKLAL 499 (679)
T ss_pred -----------------------------------------------------------------cEEEccCCHHHHHHH
Confidence 347899999999999
Q ss_pred HHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc--hhcchhheeecchhhHHHHHHHHHHHh
Q 003364 737 VELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYSF 814 (826)
Q Consensus 737 v~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~ 814 (826)
|+.+|..++.|+|+|||.||+|+|+.||||||| |++.+-++++||+|+.+ +..+.+ .+.+||...-.--.+..|++
T Consensus 500 V~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM-gsGTdvAkeAADiVLldd~~s~Iv~-av~~GR~~~~tr~~~~~f~~ 577 (679)
T PRK01122 500 IRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAGNMVDLDSNPTKLIE-VVEIGKQLLMTRGALTTFSI 577 (679)
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe-CCCCHHHHHhCCEEEeCCCHHHHHH-HHHHHHHHHhhhHhhhhhhH
Confidence 999999999999999999999999999999999 76656566699999954 445554 35679988866666677877
Q ss_pred hhhHHH
Q 003364 815 YKSLLI 820 (826)
Q Consensus 815 ~~~~~~ 820 (826)
..-++=
T Consensus 578 ~n~~~~ 583 (679)
T PRK01122 578 ANDVAK 583 (679)
T ss_pred HHHHHH
Confidence 766543
No 22
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-74 Score=611.17 Aligned_cols=625 Identities=22% Similarity=0.253 Sum_probs=436.0
Q ss_pred cCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHHHHhhhhh
Q 003364 16 LYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSD 95 (826)
Q Consensus 16 ~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~ 95 (826)
+||.|+...+.+++- .+|.+.-..|+..|..+...+|+.-. .|+++++.+++++.+.+. -.++..+.....
T Consensus 175 ~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLDe----yWYySlFtLfMli~fE~t-lV~Qrm~~lse~ 245 (1160)
T KOG0209|consen 175 KYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLDE----YWYYSLFTLFMLIAFEAT-LVKQRMRTLSEF 245 (1160)
T ss_pred HhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhHH----HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 499999999999987 88999999999777777777776422 344455555555554332 233444433334
Q ss_pred Hhh--cceEEEEEeCCeEEEEEeecCccccEEEeeC---CCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeecccc
Q 003364 96 KKA--NEKEVWVVKQGIKKLIQSQDIRVGNIVWLRE---NDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAA 170 (826)
Q Consensus 96 ~~~--~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~---G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~ 170 (826)
+.+ .+..+.|+|+++|+.+.+++|.|||+|.+.. ...||||.+|| +|+|.|||+||||||.|..|.+...
T Consensus 246 R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL-----~GsciVnEaMLtGESvPl~KE~Ie~ 320 (1160)
T KOG0209|consen 246 RTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLL-----RGSCIVNEAMLTGESVPLMKESIEL 320 (1160)
T ss_pred HhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEE-----ecceeechhhhcCCCcccccccccc
Confidence 443 4668899999999999999999999999987 56899999999 8999999999999999999976533
Q ss_pred ccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecC------------ceEEEEE
Q 003364 171 CMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNT------------EWACGVA 238 (826)
Q Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g------------~~~~~~V 238 (826)
.. ++. .++ ....++...+|.||.+.+- +.+.+.|
T Consensus 321 ~~------------------~d~---~ld-------------~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~V 366 (1160)
T KOG0209|consen 321 RD------------------SDD---ILD-------------IDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYV 366 (1160)
T ss_pred CC------------------hhh---hcc-------------cccccceEEEEcCceEEEecCCccccccCCCCCeEEEE
Confidence 11 000 000 0001344678888887531 2589999
Q ss_pred EEeCCcceeeccCCCC---CCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhh
Q 003364 239 VYTGNETKLGMTRGIP---EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVI 315 (826)
Q Consensus 239 ~~tG~~T~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (826)
++||.+|..|++.+.. .++-+.- |+=+.++++++++++++. .++.|... ...+..+--.+
T Consensus 367 lrTGFeTSQGkLvRtilf~aervTaN----n~Etf~FILFLlVFAiaA--a~Yvwv~G-----------skd~~RsrYKL 429 (1160)
T KOG0209|consen 367 LRTGFETSQGKLVRTILFSAERVTAN----NRETFIFILFLLVFAIAA--AGYVWVEG-----------SKDPTRSRYKL 429 (1160)
T ss_pred EeccccccCCceeeeEEecceeeeec----cHHHHHHHHHHHHHHHHh--hheEEEec-----------ccCcchhhhhe
Confidence 9999999999987741 2222211 121222333333333332 22333221 11122233334
Q ss_pred hhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEE
Q 003364 316 PLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR 395 (826)
Q Consensus 316 ~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~ 395 (826)
++-|.++++..+|+.||+-++++....-. .+. +.++.|..|-.+.-+|+||++|||||||||+..|.|.+
T Consensus 430 ~LeC~LIlTSVvPpELPmELSmAVNsSL~------ALa----k~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~G 499 (1160)
T KOG0209|consen 430 FLECTLILTSVVPPELPMELSMAVNSSLI------ALA----KLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEG 499 (1160)
T ss_pred eeeeeEEEeccCCCCCchhhhHHHHHHHH------HHH----HhceeecCccccccCCceeEEEecCCCccccccEEEEe
Confidence 46777788999999999888877544322 111 23478888999999999999999999999999999999
Q ss_pred EEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEe
Q 003364 396 CCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVN 475 (826)
Q Consensus 396 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~ 475 (826)
+.-... +.. .. . ..+.-..+-..+++.||++....++ ..|||.|+|.+++..|. ++.
T Consensus 500 vag~~~----~~~-~~------~---~~s~~p~~t~~vlAscHsLv~le~~------lVGDPlEKA~l~~v~W~---~~k 556 (1160)
T KOG0209|consen 500 VAGLSA----DEG-AL------T---PASKAPNETVLVLASCHSLVLLEDK------LVGDPLEKATLEAVGWN---LEK 556 (1160)
T ss_pred cccccC----Ccc-cc------c---chhhCCchHHHHHHHHHHHHHhcCc------ccCChHHHHHHHhcCcc---ccc
Confidence 753111 000 00 0 0011122456789999998765432 26999999999976542 222
Q ss_pred ecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCC---CeEEEEecCchhhhhhhhhcCCChhHHHHHHHHHHH
Q 003364 476 KNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHS---GNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQ 552 (826)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~---~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~ 552 (826)
.+.. . .-.+.....+|.+++.|+|..|||||++..... -++++.+|||||+|..+.. +.|.+|++...+|++
T Consensus 557 ~~~v-~--p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~--dvP~dY~~iYk~ytR 631 (1160)
T KOG0209|consen 557 KNSV-C--PREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR--DVPKDYDEIYKRYTR 631 (1160)
T ss_pred Cccc-C--CCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH--hCchhHHHHHHHHhh
Confidence 2110 0 012233468889999999999999999987532 3789999999999999987 568999999999999
Q ss_pred cCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeE
Q 003364 553 LGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINF 632 (826)
Q Consensus 553 ~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v 632 (826)
+|.||+|++||.+.+--..+ .-+..++.+|+||+|.|++.|..|++++++++|+.|++.+|++
T Consensus 632 ~GsRVLALg~K~l~~~~~~q-----------------~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~v 694 (1160)
T KOG0209|consen 632 QGSRVLALGYKPLGDMMVSQ-----------------VRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRV 694 (1160)
T ss_pred ccceEEEEecccccccchhh-----------------hhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceE
Confidence 99999999999998421111 1123457899999999999999999999999999999999999
Q ss_pred EEEcCCChhHHHHHHHHcCCCCCCC---------CC---cEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcCh
Q 003364 633 WMLTGDKQNTAIQIALSCNFISPEP---------KG---QLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (826)
Q Consensus 633 ~i~TGd~~~~a~~~a~~~gi~~~~~---------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 700 (826)
+|+|||++.||.++|+++||..... ++ .....+|...-..... .....-...+.++++|+
T Consensus 695 vMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~--------~~~~~l~~~~dlcitG~ 766 (1160)
T KOG0209|consen 695 VMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPG--------KKKTLLAETHDLCITGS 766 (1160)
T ss_pred EEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCC--------ccchhhhhhhhhhcchh
Confidence 9999999999999999999865411 11 1111122110000000 00000112355678888
Q ss_pred hHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCC
Q 003364 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (826)
.++.+..... . ........+|+|+.|.||..++..++..|..++|||||.||+.+||.||||||+-.|
T Consensus 767 ~l~~l~~~~~--l--~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 767 ALDHLQATDQ--L--RRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred HHHHHhhhHH--H--HHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 8887765431 0 122345789999999999999999999999999999999999999999999999433
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=5.4e-71 Score=620.11 Aligned_cols=539 Identities=20% Similarity=0.222 Sum_probs=401.8
Q ss_pred HHHHhhhHHHHHHHHHHHHhhccCccc-------c--Ccccch--hhhhhhhhhhhhHHHHHHHHhhhhhH---hhcce-
Q 003364 37 LWEQFSRFMNQYFLLIACLQLWSLITP-------V--NPASTW--GPLIFIFAVSATKEAWDDYNRYLSDK---KANEK- 101 (826)
Q Consensus 37 l~~~~~~~~n~~~l~~~~l~~~~~~~~-------~--~~~~~~--~~l~~i~~~~~~~~~~~~~~~~~~~~---~~~~~- 101 (826)
-..||++|..+.+++.++++++..+.+ . .|+... ..+++.+++..+.+.+++++..++.. ++.+.
T Consensus 26 ~~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~ 105 (675)
T TIGR01497 26 PKAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTT 105 (675)
T ss_pred HHHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 346788999888888888887653321 0 122111 11222234456677788887766544 44444
Q ss_pred EEEEEe-CCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccCCCHhhhc
Q 003364 102 EVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180 (826)
Q Consensus 102 ~~~V~r-~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~ 180 (826)
.++|+| ||++++|++++|+|||+|.|++||+|||||+++ +|.+.||||+|||||.|+.|.+..
T Consensus 106 ~a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vi-----eG~~~VDESaLTGES~PV~K~~g~----------- 169 (675)
T TIGR01497 106 FAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVI-----EGVASVDESAITGESAPVIKESGG----------- 169 (675)
T ss_pred eEEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEE-----EccEEEEcccccCCCCceeecCCC-----------
Confidence 588885 899999999999999999999999999999999 778999999999999999995321
Q ss_pred cceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCC---CCCCc
Q 003364 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPK 257 (826)
Q Consensus 181 ~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~ 257 (826)
....+++||.+.+| ++.+.|+++|.+|.++++.+ ..+.+
T Consensus 170 -------------------------------------~~~~V~aGT~v~~G-~~~i~Vt~~g~~S~lgri~~lve~a~~~ 211 (675)
T TIGR01497 170 -------------------------------------DFASVTGGTRILSD-WLVVECTANPGETFLDRMIALVEGAQRR 211 (675)
T ss_pred -------------------------------------CcceeecCcEEEee-EEEEEEEEecccCHHHHHHHHHHhcccC
Confidence 01138999999999 89999999999999998654 45566
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHHhcccccceehhhHHH
Q 003364 258 LTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDL 337 (826)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~ 337 (826)
++|+|...+.+...+.++.++++++++.++ .| ....+ .+.+. +.++..++|+++......
T Consensus 212 ktplq~~l~~l~~~l~~v~li~~~~~~~~~-~~--------------~~~~~--~~~~l---vallV~aiP~aLg~l~~a 271 (675)
T TIGR01497 212 KTPNEIALTILLIALTLVFLLVTATLWPFA-AY--------------GGNAI--SVTVL---VALLVCLIPTTIGGLLSA 271 (675)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh--------------cChhH--HHHHH---HHHHHHhCchhhhhHHHH
Confidence 799998887766554433332222111110 01 00111 11111 224566788865433332
Q ss_pred HHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCcccchhhh
Q 003364 338 VKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLL 417 (826)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 417 (826)
....++. +|.+.+ +++|++.++|+||++|++|||||||||+|+|++.+++..+.
T Consensus 272 v~iag~~------r~ar~g----vLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~---------------- 325 (675)
T TIGR01497 272 IGIAGMD------RVLGFN----VIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG---------------- 325 (675)
T ss_pred HHHHHHH------HHHHCC----eEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC----------------
Confidence 2222322 444443 89999999999999999999999999999999998864210
Q ss_pred hhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEe
Q 003364 418 NAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILET 497 (826)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 497 (826)
.+..+++...+.|+.. ..||.++|+++++++.+.... ...+.....
T Consensus 326 -------~~~~~ll~~aa~~~~~-------------s~hP~a~Aiv~~a~~~~~~~~--------------~~~~~~~~~ 371 (675)
T TIGR01497 326 -------VDEKTLADAAQLASLA-------------DDTPEGKSIVILAKQLGIRED--------------DVQSLHATF 371 (675)
T ss_pred -------CcHHHHHHHHHHhcCC-------------CCCcHHHHHHHHHHHcCCCcc--------------ccccccceE
Confidence 1122455555566532 358999999999987664211 011234567
Q ss_pred eccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcC--CChhHHHHHHHHHHHcCCeEEEEEEEecCHHHHHHHHH
Q 003364 498 LEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSL 575 (826)
Q Consensus 498 ~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~--~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~ 575 (826)
.||++.++++++.+. ++ ..+.||+||.+++.|... ..+.++++.+++++++|.|++++|
T Consensus 372 ~pf~~~~~~sg~~~~---~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va-------------- 432 (675)
T TIGR01497 372 VEFTAQTRMSGINLD---NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVC-------------- 432 (675)
T ss_pred EEEcCCCcEEEEEEe---CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEE--------------
Confidence 899999877776543 23 568999999999988642 235678888999999999999999
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC
Q 003364 576 MFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (826)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~ 655 (826)
.|.+++|+++++|++||+++++|++|+++|++++|+|||+..+|.++|+++|+
T Consensus 433 ------------------------~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI--- 485 (675)
T TIGR01497 433 ------------------------EDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV--- 485 (675)
T ss_pred ------------------------ECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC---
Confidence 36789999999999999999999999999999999999999999999999998
Q ss_pred CCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHH
Q 003364 656 EPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQ 735 (826)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~ 735 (826)
..++++++|++|..
T Consensus 486 ------------------------------------------------------------------~~v~a~~~PedK~~ 499 (675)
T TIGR01497 486 ------------------------------------------------------------------DDFIAEATPEDKIA 499 (675)
T ss_pred ------------------------------------------------------------------CEEEcCCCHHHHHH
Confidence 34678999999999
Q ss_pred HHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc--hhcchhheeecchhhHHHHHHHHHHH
Q 003364 736 LVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRLILVHGRYSYNRTAFLSQYS 813 (826)
Q Consensus 736 iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~ 813 (826)
+++.+++.++.|+|+|||.||+|||+.||+|||| +++.+.++++||+++.+ +..+.+ .+.+||..+-.-..+..|+
T Consensus 500 ~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm-~~gt~~akeaadivLldd~~s~Iv~-av~~GR~~~~t~~~~~t~~ 577 (675)
T TIGR01497 500 LIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAANMVDLDSDPTKLIE-VVHIGKQLLITRGALTTFS 577 (675)
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe-CCCCHHHHHhCCEEECCCCHHHHHH-HHHHHHHHHHHHHHHheee
Confidence 9999999999999999999999999999999999 77777677799999854 444444 3567999999989999999
Q ss_pred hhhhHHHHHh
Q 003364 814 FYKSLLICFI 823 (826)
Q Consensus 814 ~~~~~~~~~~ 823 (826)
+...+.-.|.
T Consensus 578 ~~~~~~~~~~ 587 (675)
T TIGR01497 578 IANDVAKYFA 587 (675)
T ss_pred ecccHHHHHH
Confidence 8887765553
No 24
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-68 Score=556.32 Aligned_cols=605 Identities=18% Similarity=0.212 Sum_probs=446.4
Q ss_pred CCCccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccC--cccchhhhhhhhhhhhhHHH
Q 003364 8 NDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN--PASTWGPLIFIFAVSATKEA 85 (826)
Q Consensus 8 ~~~~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~--~~~~~~~l~~i~~~~~~~~~ 85 (826)
++-|+|++.||+|++...+.+.+ +.|+.-|..|..|..-.++++...+.-.... .+..+..++..+.++..+.+
T Consensus 40 ~E~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~F 115 (942)
T KOG0205|consen 40 DEVEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISF 115 (942)
T ss_pred HHHHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeee
Confidence 44578999999999998887765 6678888899988888888877653311111 12233445555667778888
Q ss_pred HHHHHhhh---hhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCc
Q 003364 86 WDDYNRYL---SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDL 162 (826)
Q Consensus 86 ~~~~~~~~---~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p 162 (826)
++++++-. ++++--..++.|+|||+|.+++++.||||||+.++.|++||||++|++.+ .+.||+|.|||||.|
T Consensus 116 veE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLp 191 (942)
T KOG0205|consen 116 IEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLP 191 (942)
T ss_pred eeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCccc
Confidence 99988643 45555678899999999999999999999999999999999999999755 399999999999999
Q ss_pred eeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeC
Q 003364 163 KTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTG 242 (826)
Q Consensus 163 ~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG 242 (826)
++|. .++.+|+||.|.+|+ +.++|++||
T Consensus 192 vtKh---------------------------------------------------~gd~vfSgSTcKqGE-~eaVViATg 219 (942)
T KOG0205|consen 192 VTKH---------------------------------------------------PGDEVFSGSTCKQGE-IEAVVIATG 219 (942)
T ss_pred cccC---------------------------------------------------CCCceecccccccce-EEEEEEEec
Confidence 9994 456799999999995 999999999
Q ss_pred CcceeeccCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHH
Q 003364 243 NETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFE 320 (826)
Q Consensus 243 ~~T~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (826)
.+|..|+-... ......+|++.++.+..++++..++-.++..++.+ |... ..+.... -..+
T Consensus 220 ~~TF~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy-----------~~q~----R~~r~~i--~nLl 282 (942)
T KOG0205|consen 220 VHTFFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIALGMLIEITVMY-----------PIQH----RLYRDGI--DNLL 282 (942)
T ss_pred cceeehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhh-----------hhhh----hhhhhhh--hheh
Confidence 99999986542 35677889999998776555444332222222211 1100 0000000 0111
Q ss_pred HHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEE----E
Q 003364 321 LLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR----C 396 (826)
Q Consensus 321 ~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~----i 396 (826)
+++.--+|+++|..++..-.+++- ++.+ ++..+++..++|+|+.+|++|+|||||||.|++.|.+ +
T Consensus 283 vllIGgiPiamPtVlsvTMAiGs~------rLaq----qgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev 352 (942)
T KOG0205|consen 283 VLLIGGIPIAMPTVLSVTMAIGSH------RLSQ----QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV 352 (942)
T ss_pred eeeecccccccceeeeehhhHHHH------HHHh----cccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCccee
Confidence 122333666666433333223332 2222 2367899999999999999999999999999999876 2
Q ss_pred EEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEee
Q 003364 397 CIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNK 476 (826)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~ 476 (826)
+..+ .+++...++.|++. . .+..|..|.|++...++-
T Consensus 353 ~v~g----------------------v~~D~~~L~A~rAs----r----------~en~DAID~A~v~~L~dP------- 389 (942)
T KOG0205|consen 353 FVKG----------------------VDKDDVLLTAARAS----R----------KENQDAIDAAIVGMLADP------- 389 (942)
T ss_pred eecC----------------------CChHHHHHHHHHHh----h----------hcChhhHHHHHHHhhcCH-------
Confidence 2211 23333334444433 1 113578899999876541
Q ss_pred cCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc-CCChhHHHHHHHHHHHcCC
Q 003364 477 NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-GQQTRTFVEAVEQYSQLGL 555 (826)
Q Consensus 477 ~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~-~~~~~~~~~~~~~~~~~G~ 555 (826)
...+..|+.++.+||++..||....+.++ +|+.+...|||||.|++.|.. ...++++.+.+++|+++|+
T Consensus 390 ---------Keara~ikevhF~PFnPV~Krta~ty~d~-dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGl 459 (942)
T KOG0205|consen 390 ---------KEARAGIKEVHFLPFNPVDKRTALTYIDP-DGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGL 459 (942)
T ss_pred ---------HHHhhCceEEeeccCCccccceEEEEECC-CCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcc
Confidence 22355688999999999999999999987 788899999999999999985 4568889999999999999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEE
Q 003364 556 RTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 635 (826)
Q Consensus 556 rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~ 635 (826)
|.+++|++..++... +.-.....|+|+.-+-||+|.++.++|++....|+.|-|+
T Consensus 460 RSLgVArq~v~e~~~-------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vkmi 514 (942)
T KOG0205|consen 460 RSLAVARQEVPEKTK-------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 514 (942)
T ss_pred hhhhhhhhccccccc-------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeee
Confidence 999999988776421 1223568899999999999999999999999999999999
Q ss_pred cCCChhHHHHHHHHcCCCCCCCCCc-EEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHh
Q 003364 636 TGDKQNTAIQIALSCNFISPEPKGQ-LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFT 714 (826)
Q Consensus 636 TGd~~~~a~~~a~~~gi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 714 (826)
|||...-++..++++|+-.+..++. .+..++... +.+....
T Consensus 515 tgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~---------------------------~~~~~v~----------- 556 (942)
T KOG0205|consen 515 TGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGS---------------------------MPGSPVD----------- 556 (942)
T ss_pred cchHHHHHHhhhhhhccccCcCCchhhccCCCCCC---------------------------CCCCcHH-----------
Confidence 9999999999999999866543311 111110000 0000000
Q ss_pred hhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchhcchhh
Q 003364 715 ELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 715 ~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
..+.+..-|+.+.|++|..+|+.|++.++.+.|.|||.||.|+|+.||+|||+ ..+.+.+..+||+|+.. -.|..+
T Consensus 557 --elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiav-a~atdaar~asdiVlte-pglSvi 632 (942)
T KOG0205|consen 557 --ELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAV-ADATDAARSASDIVLTE-PGLSVI 632 (942)
T ss_pred --HHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceee-ccchhhhcccccEEEcC-CCchhh
Confidence 11233667899999999999999999999999999999999999999999999 77766666699999965 444443
Q ss_pred e--eecchhhHHHHHHHHHHHhhhhHH
Q 003364 795 I--LVHGRYSYNRTAFLSQYSFYKSLL 819 (826)
Q Consensus 795 ~--l~~gr~~~~~~~~~~~~~~~~~~~ 819 (826)
+ +..+|.+|+|++....|.+.-.+-
T Consensus 633 I~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 633 ISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred HHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 3 568999999999988887665554
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-66 Score=580.05 Aligned_cols=489 Identities=20% Similarity=0.232 Sum_probs=374.4
Q ss_pred hhhhhhhhHHHHHHHHhhh------hhHhhcceEEEEEe-CCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCc
Q 003364 75 FIFAVSATKEAWDDYNRYL------SDKKANEKEVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQG 147 (826)
Q Consensus 75 ~i~~~~~~~~~~~~~~~~~------~~~~~~~~~~~V~r-~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G 147 (826)
+++++..+.++++.+.+.+ .+.++.|+++++++ ||++++||.++|++||+|.|+|||+||+||+++ +|
T Consensus 179 ~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~-----~G 253 (713)
T COG2217 179 MLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV-----SG 253 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE-----eC
Confidence 3444445556666665544 24566789998876 556999999999999999999999999999999 89
Q ss_pred eEEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecce
Q 003364 148 VCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCY 227 (826)
Q Consensus 148 ~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~ 227 (826)
+..||||+|||||.|+.| ..++.+++||.
T Consensus 254 ~s~vDeS~iTGEs~PV~k---------------------------------------------------~~Gd~V~aGti 282 (713)
T COG2217 254 SSSVDESMLTGESLPVEK---------------------------------------------------KPGDEVFAGTV 282 (713)
T ss_pred cEEeecchhhCCCCCEec---------------------------------------------------CCCCEEeeeEE
Confidence 999999999999999999 45678999999
Q ss_pred eecCceEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCC
Q 003364 228 LRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYP 304 (826)
Q Consensus 228 v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 304 (826)
+.+| .....|+++|.+|.++++.+ .++.++++.|+++|+++.+|.+..++++++++++|+++... +|..
T Consensus 283 N~~G-~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~----~~~~--- 354 (713)
T COG2217 283 NLDG-SLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG----DWET--- 354 (713)
T ss_pred ECCc-cEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC----cHHH---
Confidence 9999 79999999999999998755 57888999999999999999998888888887765443220 0100
Q ss_pred CCCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCc
Q 003364 305 QEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTG 384 (826)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTG 384 (826)
.....+.++.+.|||.+..++|.++.+.++.+. ++++++|++.++|.++++|+++|||||
T Consensus 355 --a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA------------------~~GILiK~g~~LE~l~~v~tvvFDKTG 414 (713)
T COG2217 355 --ALYRALAVLVIACPCALGLATPTAILVGIGRAA------------------RRGILIKGGEALERLAKVDTVVFDKTG 414 (713)
T ss_pred --HHHHHHhheeeeCccHHHhHHHHHHHHHHHHHH------------------hCceEEeChHHHHhhccCCEEEEeCCC
Confidence 001222333455666666666665444333332 246999999999999999999999999
Q ss_pred ccccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHH
Q 003364 385 TLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVH 464 (826)
Q Consensus 385 TLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~ 464 (826)
|||+|+++|.++...+. +..+++...+.- +..+.||..+|+++
T Consensus 415 TLT~G~p~v~~v~~~~~------------------------~e~~~L~laAal-------------E~~S~HPiA~AIv~ 457 (713)
T COG2217 415 TLTEGKPEVTDVVALDG------------------------DEDELLALAAAL-------------EQHSEHPLAKAIVK 457 (713)
T ss_pred CCcCCceEEEEEecCCC------------------------CHHHHHHHHHHH-------------HhcCCChHHHHHHH
Confidence 99999999999875321 111222211111 12368999999999
Q ss_pred HHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHH
Q 003364 465 AAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (826)
Q Consensus 465 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~ 544 (826)
+++..+... .+....+| .+ .|-.+. +| ..+.-|++..+...-.+. +. ..
T Consensus 458 ~a~~~~~~~------------------~~~~~~i~----G~--Gv~~~v--~g--~~v~vG~~~~~~~~~~~~--~~-~~ 506 (713)
T COG2217 458 AAAERGLPD------------------VEDFEEIP----GR--GVEAEV--DG--ERVLVGNARLLGEEGIDL--PL-LS 506 (713)
T ss_pred HHHhcCCCC------------------ccceeeec----cC--cEEEEE--CC--EEEEEcCHHHHhhcCCCc--cc-hh
Confidence 998765210 00011122 11 111111 33 334558887765442111 11 56
Q ss_pred HHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHH
Q 003364 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (826)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~ 624 (826)
.....+..+|..++.++ .|.+++|+++++|++|++++++|++
T Consensus 507 ~~~~~~~~~G~t~v~va--------------------------------------~dg~~~g~i~~~D~~R~~a~~aI~~ 548 (713)
T COG2217 507 ERIEALESEGKTVVFVA--------------------------------------VDGKLVGVIALADELRPDAKEAIAA 548 (713)
T ss_pred hhHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEEeCCCChhHHHHHHH
Confidence 67888899999988888 5889999999999999999999999
Q ss_pred HHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHH
Q 003364 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (826)
Q Consensus 625 l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 704 (826)
||+.|+++.|+|||+..+|..+|+++||
T Consensus 549 L~~~Gi~~~mLTGDn~~~A~~iA~~lGI---------------------------------------------------- 576 (713)
T COG2217 549 LKALGIKVVMLTGDNRRTAEAIAKELGI---------------------------------------------------- 576 (713)
T ss_pred HHHCCCeEEEEcCCCHHHHHHHHHHcCh----------------------------------------------------
Confidence 9999999999999999999999999998
Q ss_pred HHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccc
Q 003364 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYS 784 (826)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v 784 (826)
..+++++.|++|.++|+.|+..++.|+|+|||.||+|+|..||||||| |.+.+-++++||++
T Consensus 577 -----------------d~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAm-G~GtDvA~eaADvv 638 (713)
T COG2217 577 -----------------DEVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAM-GSGTDVAIEAADVV 638 (713)
T ss_pred -----------------HhheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEee-cCCcHHHHHhCCEE
Confidence 357789999999999999999999999999999999999999999999 77555555699999
Q ss_pred ccchhcchhh--eeecchhhHHHHHHHHHHHhhhhHHHHHhh
Q 003364 785 IGKFRFLKRL--ILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824 (826)
Q Consensus 785 ~~~~~~l~~l--~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 824 (826)
+.+ +.|..+ .+.-+|.+++++++++.|+|.+|.+++.+.
T Consensus 639 L~~-~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA 679 (713)
T COG2217 639 LMR-DDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLA 679 (713)
T ss_pred Eec-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 966 334333 244699999999999999999999877654
No 26
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=4e-64 Score=567.88 Aligned_cols=465 Identities=31% Similarity=0.397 Sum_probs=376.6
Q ss_pred hhhhhHHHHHHHHhhh---hhHh--hcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEE
Q 003364 78 AVSATKEAWDDYNRYL---SDKK--ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVE 152 (826)
Q Consensus 78 ~~~~~~~~~~~~~~~~---~~~~--~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vd 152 (826)
++..+.+.+++++..+ .+++ +++++++|+|+| +++|++++|+|||+|.+++||+|||||+|+ +|.+.||
T Consensus 7 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl-----~g~~~vd 80 (499)
T TIGR01494 7 LLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLL-----SGSCFVD 80 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEE-----EccEEEE
Confidence 3444455565555433 2333 788999999999 999999999999999999999999999999 7789999
Q ss_pred cCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCc
Q 003364 153 TAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTE 232 (826)
Q Consensus 153 es~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~ 232 (826)
||+|||||.|+.|. .++.+++|+.+.+|
T Consensus 81 es~LTGEs~pv~k~---------------------------------------------------~g~~v~~gs~~~~G- 108 (499)
T TIGR01494 81 ESNLTGESVPVLKT---------------------------------------------------AGDAVFAGTYVFNG- 108 (499)
T ss_pred cccccCCCCCeeec---------------------------------------------------cCCccccCcEEecc-
Confidence 99999999999994 24568999999999
Q ss_pred eEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHH-HHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCc
Q 003364 233 WACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLT-GAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFP 308 (826)
Q Consensus 233 ~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (826)
.....|..+|.+|..+++.. .....++++++..+++. .++.++.+++++++++.+..+.. ...+
T Consensus 109 ~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~------------~~~~ 176 (499)
T TIGR01494 109 TLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLW------------DPNS 176 (499)
T ss_pred EEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------cccc
Confidence 78899999999998887533 34444688899999988 66666666666655554322110 0001
Q ss_pred cchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCccccc
Q 003364 309 WYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTE 388 (826)
Q Consensus 309 ~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~ 388 (826)
|...+ ..++.++..++|++|+++++++...+.. ++.+. ++++|+++++|+||++|++|||||||||+
T Consensus 177 ~~~~~---~~~~~vl~~~~P~aL~~~~~~~~~~~~~------~~~~~----gilvk~~~~lE~l~~v~~i~fDKTGTLT~ 243 (499)
T TIGR01494 177 IFKIF---LRALILLVIAIPIALPLAVTIALAVGDA------RLAKK----GIVVRSLNALEELGKVDYICSDKTGTLTK 243 (499)
T ss_pred HHHHH---HHHHHHHHHhcCCcHHHHHHHHHHHHHH------HHHHC----CcEEechhhhhhccCCcEEEeeCCCcccc
Confidence 22222 3445577888999999998888887755 44444 48999999999999999999999999999
Q ss_pred ceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHh
Q 003364 389 NRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ 468 (826)
Q Consensus 389 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~ 468 (826)
|+|++.+++..+. ++.++||.|.|+++++++
T Consensus 244 ~~~~v~~~~~~~~-------------------------------------------------~~~s~hp~~~ai~~~~~~ 274 (499)
T TIGR01494 244 NEMSFKKVSVLGG-------------------------------------------------EYLSGHPDERALVKSAKW 274 (499)
T ss_pred CceEEEEEEecCC-------------------------------------------------CcCCCChHHHHHHHHhhh
Confidence 9999999875321 022579999999999864
Q ss_pred CCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHHH
Q 003364 469 LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVE 548 (826)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~ 548 (826)
.+ +...||++.+++|+++++.. ++ .|+||+++.+.+.|.. +.+...
T Consensus 275 ~~------------------------~~~~~f~~~~~~~~~~~~~~-~~---~~~~G~~~~i~~~~~~------~~~~~~ 320 (499)
T TIGR01494 275 KI------------------------LNVFEFSSVRKRMSVIVRGP-DG---TYVKGAPEFVLSRVKD------LEEKVK 320 (499)
T ss_pred cC------------------------cceeccCCCCceEEEEEecC-Cc---EEEeCCHHHHHHhhHH------HHHHHH
Confidence 21 13569999999999999863 22 3789999999998852 445566
Q ss_pred HHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHc
Q 003364 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (826)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~ 628 (826)
++..+|+|++++|+ +.+++|+++++|++|+++.++|+.|+++
T Consensus 321 ~~~~~g~~~~~~a~--------------------------------------~~~~~g~i~l~d~lr~~~~~~i~~l~~~ 362 (499)
T TIGR01494 321 ELAQSGLRVLAVAS--------------------------------------KETLLGLLGLEDPLRDDAKETISELREA 362 (499)
T ss_pred HHHhCCCEEEEEEE--------------------------------------CCeEEEEEEecCCCchhHHHHHHHHHHC
Confidence 78889999999995 3479999999999999999999999999
Q ss_pred CCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHH
Q 003364 629 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH 708 (826)
Q Consensus 629 Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 708 (826)
|++++|+|||+..++..+|+++|+
T Consensus 363 gi~~~~ltGD~~~~a~~ia~~lgi-------------------------------------------------------- 386 (499)
T TIGR01494 363 GIRVIMLTGDNVLTAKAIAKELGI-------------------------------------------------------- 386 (499)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCc--------------------------------------------------------
Confidence 999999999999999999999985
Q ss_pred HHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 709 ~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
+++++|++|.++++.++..++.|+|+|||.||++||+.||+|||| + ++.+||+++.+
T Consensus 387 ----------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~-~-----a~~~adivl~~- 443 (499)
T TIGR01494 387 ----------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAM-G-----AKAAADIVLLD- 443 (499)
T ss_pred ----------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCcccc-c-----hHHhCCeEEec-
Confidence 246899999999999999999999999999999999999999999 5 47789999976
Q ss_pred hcchhh--eeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 789 RFLKRL--ILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 789 ~~l~~l--~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
+.+..+ ++.+||.+++++++++.|.+++|++.+.+.+
T Consensus 444 ~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~ 482 (499)
T TIGR01494 444 DNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAA 482 (499)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333332 4668999999999999999999998777654
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.1e-63 Score=581.51 Aligned_cols=476 Identities=17% Similarity=0.200 Sum_probs=363.2
Q ss_pred hhhHHHHHHHHhhhh---hHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCC
Q 003364 80 SATKEAWDDYNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAAL 156 (826)
Q Consensus 80 ~~~~~~~~~~~~~~~---~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~l 156 (826)
...++.+.+.|..+. +.++.|.+++|+|||++++|++++|+|||+|.|++||+|||||+|+ +|.+.||||+|
T Consensus 219 g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi-----~g~~~vdes~l 293 (741)
T PRK11033 219 GERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLL-----SPFASFDESAL 293 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEE-----ECcEEeecccc
Confidence 334444444444333 4566788999999999999999999999999999999999999999 78899999999
Q ss_pred CCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEE
Q 003364 157 DGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236 (826)
Q Consensus 157 TGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~ 236 (826)
||||.|+.| ..++.+++||.+.+| .+.+
T Consensus 294 TGEs~Pv~k---------------------------------------------------~~Gd~V~aGt~~~~G-~~~i 321 (741)
T PRK11033 294 TGESIPVER---------------------------------------------------ATGEKVPAGATSVDR-LVTL 321 (741)
T ss_pred cCCCCCEec---------------------------------------------------CCCCeeccCCEEcCc-eEEE
Confidence 999999999 356789999999999 7999
Q ss_pred EEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhh
Q 003364 237 VAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELL 313 (826)
Q Consensus 237 ~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (826)
.|+++|.+|.++++.+ ..+.+++++++.+++++.++.+++++++++++++|+++.. .+|...+
T Consensus 322 ~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~--------------~~~~~~i 387 (741)
T PRK11033 322 EVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFA--------------APWQEWI 387 (741)
T ss_pred EEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--------------CCHHHHH
Confidence 9999999999998754 4566789999999999999999999888888776533211 1122222
Q ss_pred -----hhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCccccc
Q 003364 314 -----VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTE 388 (826)
Q Consensus 314 -----~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~ 388 (826)
++.+.|+|.+..++|.+ +..+....++ +++++|++.++|.|+++|++|||||||||+
T Consensus 388 ~~a~svlviacPcaL~latP~a----~~~~l~~aar--------------~gilik~~~alE~l~~v~~v~fDKTGTLT~ 449 (741)
T PRK11033 388 YRGLTLLLIGCPCALVISTPAA----ITSGLAAAAR--------------RGALIKGGAALEQLGRVTTVAFDKTGTLTE 449 (741)
T ss_pred HHHHHHHHHhchhhhhhhhHHH----HHHHHHHHHH--------------CCeEEcCcHHHHHhhCCCEEEEeCCCCCcC
Confidence 22233333333333433 3322222222 359999999999999999999999999999
Q ss_pred ceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHh
Q 003364 389 NRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ 468 (826)
Q Consensus 389 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~ 468 (826)
|+|+|.+++..+.. +..+++...+... ..+.||.++|+++++.+
T Consensus 450 g~~~v~~~~~~~~~-----------------------~~~~~l~~aa~~e-------------~~s~hPia~Ai~~~a~~ 493 (741)
T PRK11033 450 GKPQVTDIHPATGI-----------------------SESELLALAAAVE-------------QGSTHPLAQAIVREAQV 493 (741)
T ss_pred CceEEEEEEecCCC-----------------------CHHHHHHHHHHHh-------------cCCCCHHHHHHHHHHHh
Confidence 99999998642210 0112222221111 12579999999999987
Q ss_pred CCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceE-EEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHH
Q 003364 469 LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMS-VVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAV 547 (826)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~s-viv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~ 547 (826)
.+.. +||.++.+.+. .-++..-+|+.+ .-|+|+.+.+. .+.+...+
T Consensus 494 ~~~~-------------------------~~~~~~~~~~~g~Gv~~~~~g~~~--~ig~~~~~~~~------~~~~~~~~ 540 (741)
T PRK11033 494 RGLA-------------------------IPEAESQRALAGSGIEGQVNGERV--LICAPGKLPPL------ADAFAGQI 540 (741)
T ss_pred cCCC-------------------------CCCCcceEEEeeEEEEEEECCEEE--EEecchhhhhc------cHHHHHHH
Confidence 6532 24444444432 112211134332 34888877541 23466677
Q ss_pred HHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHH
Q 003364 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (826)
Q Consensus 548 ~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~ 627 (826)
.++..+|+|++++| .|.+++|+++++|++|++++++|++|++
T Consensus 541 ~~~~~~g~~~v~va--------------------------------------~~~~~~g~i~l~d~~r~~a~~~i~~L~~ 582 (741)
T PRK11033 541 NELESAGKTVVLVL--------------------------------------RNDDVLGLIALQDTLRADARQAISELKA 582 (741)
T ss_pred HHHHhCCCEEEEEE--------------------------------------ECCEEEEEEEEecCCchhHHHHHHHHHH
Confidence 88999999999999 4779999999999999999999999999
Q ss_pred cCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHH
Q 003364 628 AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK 707 (826)
Q Consensus 628 ~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 707 (826)
.|++++|+|||+..++..+|+++||.
T Consensus 583 ~gi~~~llTGd~~~~a~~ia~~lgi~------------------------------------------------------ 608 (741)
T PRK11033 583 LGIKGVMLTGDNPRAAAAIAGELGID------------------------------------------------------ 608 (741)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCC------------------------------------------------------
Confidence 99999999999999999999999982
Q ss_pred HHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc
Q 003364 708 HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (826)
Q Consensus 708 ~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~ 787 (826)
.+++..|++|..+++.++.. +.|+|+|||.||+|||+.||+|||| |++.+.++++||+++..
T Consensus 609 ----------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~-g~~~~~a~~~adivl~~ 670 (741)
T PRK11033 609 ----------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAM-GSGTDVALETADAALTH 670 (741)
T ss_pred ----------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEe-cCCCHHHHHhCCEEEec
Confidence 23457899999999999865 6899999999999999999999999 77777777899999954
Q ss_pred --hhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhh
Q 003364 788 --FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQ 824 (826)
Q Consensus 788 --~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~ 824 (826)
+..|.. .+..||.+++++++++.|++.+|++++.+.
T Consensus 671 ~~l~~l~~-~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a 708 (741)
T PRK11033 671 NRLRGLAQ-MIELSRATHANIRQNITIALGLKAIFLVTT 708 (741)
T ss_pred CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344443 456799999999999999999997665543
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=5.4e-62 Score=555.07 Aligned_cols=496 Identities=18% Similarity=0.199 Sum_probs=375.6
Q ss_pred hhhhhhhhhhhHHHHHHHHhhhh---hHhhcceEEEEEeCC-eEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCc
Q 003364 72 PLIFIFAVSATKEAWDDYNRYLS---DKKANEKEVWVVKQG-IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQG 147 (826)
Q Consensus 72 ~l~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~V~r~g-~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G 147 (826)
.+++++++...++.+.+++..+. +...++.+++|+|+| ++++|++++|+|||+|.|++||+|||||+|+ +|
T Consensus 23 ~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi-----~g 97 (556)
T TIGR01525 23 LLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVI-----SG 97 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEE-----ec
Confidence 33444445555666666665443 345567899999996 9999999999999999999999999999999 78
Q ss_pred eEEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecce
Q 003364 148 VCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCY 227 (826)
Q Consensus 148 ~~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~ 227 (826)
.+.||||+|||||.|+.| ..++.+|+||.
T Consensus 98 ~~~vdes~lTGEs~pv~k---------------------------------------------------~~g~~v~aGt~ 126 (556)
T TIGR01525 98 ESEVDESALTGESMPVEK---------------------------------------------------KEGDEVFAGTI 126 (556)
T ss_pred ceEEeehhccCCCCCEec---------------------------------------------------CCcCEEeeceE
Confidence 899999999999999999 34678999999
Q ss_pred eecCceEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCC
Q 003364 228 LRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYP 304 (826)
Q Consensus 228 v~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 304 (826)
+.+| .+.++|++||.+|++|++.+ ..+.+++++++.+++++.++.+++++++++.+++++....
T Consensus 127 v~~g-~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~------------ 193 (556)
T TIGR01525 127 NGDG-SLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA------------ 193 (556)
T ss_pred ECCc-eEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------
Confidence 9999 79999999999999998755 3455779999999999999988888887777766432210
Q ss_pred CCCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCc
Q 003364 305 QEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTG 384 (826)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTG 384 (826)
. ..+ ..++.++...+|++|+++++++...... ++.++ ++++|+++++|.||++|++||||||
T Consensus 194 ---~--~~~---~~~~~vlv~~~P~al~l~~~~~~~~~~~------~~~~~----gilvk~~~~le~l~~v~~i~fDKTG 255 (556)
T TIGR01525 194 ---L--GAL---YRALAVLVVACPCALGLATPVAILVAIG------VAARR----GILIKGGDALEKLAKVKTVVFDKTG 255 (556)
T ss_pred ---c--hHH---HHHHHHHhhccccchhehhHHHHHHHHH------HHHHC----CceecCchHHHHhhcCCEEEEeCCC
Confidence 0 111 2233355667888888777776666554 33333 4999999999999999999999999
Q ss_pred ccccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHH
Q 003364 385 TLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVH 464 (826)
Q Consensus 385 TLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~ 464 (826)
|||+|+|+|.+++..+... ....+++...+.+. ..+.||.+.|+++
T Consensus 256 TLT~~~~~v~~~~~~~~~~---------------------~~~~~~l~~a~~~e-------------~~~~hp~~~Ai~~ 301 (556)
T TIGR01525 256 TLTTGKPTVVDVEPLDDAS---------------------ISEEELLALAAALE-------------QSSSHPLARAIVR 301 (556)
T ss_pred CCcCCceEEEEEEecCCCC---------------------ccHHHHHHHHHHHh-------------ccCCChHHHHHHH
Confidence 9999999999987532110 00112222222211 1246999999999
Q ss_pred HHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHH
Q 003364 465 AAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (826)
Q Consensus 465 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~ 544 (826)
++++.+..... . + ....++ .+.+...+ +|. .-+..|+++.+ . .. ......+.
T Consensus 302 ~~~~~~~~~~~--~-------------~-~~~~~~----~~gi~~~~----~g~-~~~~lg~~~~~-~-~~-~~~~~~~~ 353 (556)
T TIGR01525 302 YAKKRGLELPK--Q-------------E-DVEEVP----GKGVEATV----DGQ-EEVRIGNPRLL-E-LA-AEPISASP 353 (556)
T ss_pred HHHhcCCCccc--c-------------c-CeeEec----CCeEEEEE----CCe-eEEEEecHHHH-h-hc-CCCchhhH
Confidence 99876643210 0 0 000111 11222221 221 12334666654 1 11 11222344
Q ss_pred HHHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHH
Q 003364 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (826)
Q Consensus 545 ~~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~ 624 (826)
+.+..+..+|+|++.+| .|.+++|.+.++|+++|+++++|++
T Consensus 354 ~~~~~~~~~g~~~~~v~--------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~ 395 (556)
T TIGR01525 354 DLLNEGESQGKTVVFVA--------------------------------------VDGELLGVIALRDQLRPEAKEAIAA 395 (556)
T ss_pred HHHHHHhhCCcEEEEEE--------------------------------------ECCEEEEEEEecccchHhHHHHHHH
Confidence 56777889999999999 5789999999999999999999999
Q ss_pred HHHcC-CeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHH
Q 003364 625 LRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 703 (826)
Q Consensus 625 l~~~G-i~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 703 (826)
|+++| ++++|+|||+..++..+++++|+
T Consensus 396 L~~~g~i~v~ivTgd~~~~a~~i~~~lgi--------------------------------------------------- 424 (556)
T TIGR01525 396 LKRAGGIKLVMLTGDNRSAAEAVAAELGI--------------------------------------------------- 424 (556)
T ss_pred HHHcCCCeEEEEeCCCHHHHHHHHHHhCC---------------------------------------------------
Confidence 99999 99999999999999999999998
Q ss_pred HHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccc
Q 003364 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783 (826)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~ 783 (826)
..+|.++.|++|..+++.++..+++|+|+|||.||++|++.||+||+| |++.+.++..||+
T Consensus 425 ------------------~~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~Ad~ 485 (556)
T TIGR01525 425 ------------------DEVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAM-GAGSDVAIEAADI 485 (556)
T ss_pred ------------------CeeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe-CCCCHHHHHhCCE
Confidence 235667789999999999998889999999999999999999999999 7766666779999
Q ss_pred cccc--hhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 784 SIGK--FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 784 v~~~--~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
++.+ +..+.. ++..||.+++++++++.|++.+|++.+.+.+
T Consensus 486 vi~~~~~~~l~~-~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 486 VLLNDDLSSLPT-AIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred EEeCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9964 455555 3567999999999999999999998766543
No 29
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-62 Score=536.02 Aligned_cols=481 Identities=19% Similarity=0.223 Sum_probs=380.0
Q ss_pred hHhhcceEEEEEeCCe-EEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccC
Q 003364 95 DKKANEKEVWVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMG 173 (826)
Q Consensus 95 ~~~~~~~~~~V~r~g~-~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~ 173 (826)
+.++.|.++.++.+|+ +++|+.+.|++||+|.+.||++||+||+++ +|++.||||.+|||+.|+.|
T Consensus 372 Lmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv-----~Gss~VDEs~iTGEs~PV~K-------- 438 (951)
T KOG0207|consen 372 LMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVV-----DGSSEVDESLITGESMPVPK-------- 438 (951)
T ss_pred HhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEE-----eCceeechhhccCCceeccc--------
Confidence 5667899999999997 899999999999999999999999999999 89999999999999999999
Q ss_pred CCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCC-
Q 003364 174 MDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG- 252 (826)
Q Consensus 174 ~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~- 252 (826)
..++.+.+||++.+| ..+..++++|.||.++++.+
T Consensus 439 -------------------------------------------k~gs~ViaGsiN~nG-~l~VkaT~~g~dttla~IvkL 474 (951)
T KOG0207|consen 439 -------------------------------------------KKGSTVIAGSINLNG-TLLVKATKVGGDTTLAQIVKL 474 (951)
T ss_pred -------------------------------------------CCCCeeeeeeecCCc-eEEEEEEeccccchHHHHHHH
Confidence 457789999999999 89999999999999998655
Q ss_pred --CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccc--cceeeCCCCCcc--chhhhhhhHHHHHhccc
Q 003364 253 --IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARK--QWYVLYPQEFPW--YELLVIPLRFELLCSIM 326 (826)
Q Consensus 253 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~ 326 (826)
.++..+.|+|+++|+++.+|.++.+++.++++++|.++....... .|.- .-..+ ..+.+..+.|+|.+..+
T Consensus 475 VEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~---~~~~a~~~aisVlviACPCaLgLA 551 (951)
T KOG0207|consen 475 VEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFD---AFSHAFQLAISVLVIACPCALGLA 551 (951)
T ss_pred HHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhH---HHHHHHHhhheEEEEECchhhhcC
Confidence 577889999999999999999999999998888876654421110 1110 00001 12223446677888888
Q ss_pred ccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCC
Q 003364 327 IPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE 406 (826)
Q Consensus 327 iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~ 406 (826)
.|.+..+..+.+... |+++|.++++|.+.++++++||||||||+|++.|.++......
T Consensus 552 TPtAvmvatgvgA~n------------------GvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~---- 609 (951)
T KOG0207|consen 552 TPTAVMVATGVGATN------------------GVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP---- 609 (951)
T ss_pred CceEEEEEechhhhc------------------ceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc----
Confidence 888877777766543 4899999999999999999999999999999999998753321
Q ss_pred CCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeC
Q 003364 407 TGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFN 486 (826)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~ 486 (826)
-+..+++...+.-. -.+.||..+|++++|+...... +
T Consensus 610 ------------------~~~~e~l~~v~a~E-------------s~SeHPig~AIv~yak~~~~~~---~--------- 646 (951)
T KOG0207|consen 610 ------------------ISLKEALALVAAME-------------SGSEHPIGKAIVDYAKEKLVEP---N--------- 646 (951)
T ss_pred ------------------ccHHHHHHHHHHHh-------------cCCcCchHHHHHHHHHhccccc---C---------
Confidence 11122222222111 2257999999999999866110 0
Q ss_pred CeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHHHHHHHcCCeEEEEEEEecC
Q 003364 487 GSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVE 566 (826)
Q Consensus 487 ~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~ 566 (826)
.-.++..-.|..+.....+.+. ++- ..-|.-+.+...-. ..++++++.++.....|..+.++|
T Consensus 647 ----~~~~~~~~~~pg~g~~~~~~~~----~~~--i~iGN~~~~~r~~~--~~~~~i~~~~~~~e~~g~tvv~v~----- 709 (951)
T KOG0207|consen 647 ----PEGVLSFEYFPGEGIYVTVTVD----GNE--VLIGNKEWMSRNGC--SIPDDILDALTESERKGQTVVYVA----- 709 (951)
T ss_pred ----ccccceeecccCCCcccceEEe----eeE--EeechHHHHHhcCC--CCchhHHHhhhhHhhcCceEEEEE-----
Confidence 0111122233333333222221 222 34477666655422 235668889999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHH
Q 003364 567 EDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQI 646 (826)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~ 646 (826)
.|.+++|++.++|++|+++..+|..|++.|++++|+|||+..+|.++
T Consensus 710 ---------------------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~sv 756 (951)
T KOG0207|consen 710 ---------------------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSV 756 (951)
T ss_pred ---------------------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHH
Confidence 68999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEE
Q 003364 647 ALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICC 726 (826)
Q Consensus 647 a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~ 726 (826)
|+++|+ ..+++
T Consensus 757 A~~VGi---------------------------------------------------------------------~~V~a 767 (951)
T KOG0207|consen 757 AQQVGI---------------------------------------------------------------------DNVYA 767 (951)
T ss_pred HHhhCc---------------------------------------------------------------------ceEEe
Confidence 999997 57899
Q ss_pred EeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchhcchhh-eee-cchhhHH
Q 003364 727 RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILV-HGRYSYN 804 (826)
Q Consensus 727 ~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~l-~l~-~gr~~~~ 804 (826)
++.|++|.+.|+.++..+..|+|+|||.||.|+|..||+|||| |.+.+-+.++||+|+..+ .|..+ ..+ -+|++..
T Consensus 768 ev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIai-g~gs~vAieaADIVLmrn-~L~~v~~ai~LSrkt~~ 845 (951)
T KOG0207|consen 768 EVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAI-GAGSDVAIEAADIVLMRN-DLRDVPFAIDLSRKTVK 845 (951)
T ss_pred ccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceee-ccccHHHHhhCCEEEEcc-chhhhHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999 776655666999999875 44443 233 5999999
Q ss_pred HHHHHHHHHhhhhHHHH
Q 003364 805 RTAFLSQYSFYKSLLIC 821 (826)
Q Consensus 805 ~~~~~~~~~~~~~~~~~ 821 (826)
|++.++.|++.+|++-+
T Consensus 846 rIk~N~~~A~~yn~~~I 862 (951)
T KOG0207|consen 846 RIKLNFVWALIYNLVGI 862 (951)
T ss_pred hHHHHHHHHHHHHHhhh
Confidence 99999999999999843
No 30
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=3.5e-61 Score=544.45 Aligned_cols=475 Identities=19% Similarity=0.238 Sum_probs=366.7
Q ss_pred hhhhhhhhhhhHHHHHHHHhhhh---hHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCce
Q 003364 72 PLIFIFAVSATKEAWDDYNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (826)
Q Consensus 72 ~l~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~ 148 (826)
.+++++++...++.+++++..+. ++++++++++|+|||++++|++++|+|||+|.+++||+|||||+++ +|.
T Consensus 23 ~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii-----~g~ 97 (536)
T TIGR01512 23 LLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVL-----SGT 97 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEE-----eCc
Confidence 34444555566677777665444 4456789999999999999999999999999999999999999999 788
Q ss_pred EEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeeccee
Q 003364 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (826)
Q Consensus 149 ~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v 228 (826)
+.||||+|||||.|+.| ..++.+|+||.+
T Consensus 98 ~~vdes~lTGEs~pv~k---------------------------------------------------~~g~~v~aGt~v 126 (536)
T TIGR01512 98 STVDESALTGESVPVEK---------------------------------------------------APGDEVFAGAIN 126 (536)
T ss_pred EEEEecccCCCCCcEEe---------------------------------------------------CCCCEEEeeeEE
Confidence 99999999999999999 345789999999
Q ss_pred ecCceEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCC
Q 003364 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ 305 (826)
Q Consensus 229 ~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (826)
.+| .+.++|++||.+|.+|++.+ ..+.+++++++.+++++.++.+++++++++.+++++++.
T Consensus 127 ~~G-~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 191 (536)
T TIGR01512 127 LDG-VLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK-------------- 191 (536)
T ss_pred CCc-eEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 999 79999999999999998755 345577899999999999998888877776666543211
Q ss_pred CCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcc
Q 003364 306 EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (826)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGT 385 (826)
.+...+ ...+.++..++|++|+++..++...+.. ++.++ ++++|+++++|.+|++|++|||||||
T Consensus 192 --~~~~~~---~~~~svlv~~~P~aL~la~~~~~~~~~~------~~~k~----gilik~~~~le~l~~v~~i~fDKTGT 256 (536)
T TIGR01512 192 --RWPFWV---YRALVLLVVASPCALVISAPAAYLSAIS------AAARH----GILIKGGAALEALAKIKTVAFDKTGT 256 (536)
T ss_pred --ccHHHH---HHHHHHHhhcCccccccchHHHHHHHHH------HHHHC----CeEEcCcHHHHhhcCCCEEEECCCCC
Confidence 011111 1223355677888887777666665554 33333 49999999999999999999999999
Q ss_pred cccceeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHH
Q 003364 386 LTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHA 465 (826)
Q Consensus 386 LT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~ 465 (826)
||+|+|++.+++.. +++...+.+. ..+.||.++|++++
T Consensus 257 LT~~~~~v~~~~~~-----------------------------~~l~~a~~~e-------------~~~~hp~~~Ai~~~ 294 (536)
T TIGR01512 257 LTTGRPKVVDVVPA-----------------------------EVLRLAAAAE-------------QASSHPLARAIVDY 294 (536)
T ss_pred CcCCceEEEEeeHH-----------------------------HHHHHHHHHh-------------ccCCCcHHHHHHHH
Confidence 99999999987420 1222222211 12579999999999
Q ss_pred HHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHH
Q 003364 466 AAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545 (826)
Q Consensus 466 a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~ 545 (826)
+.+.+ .+ .....+| .+.+...+ +|.. +..|+++.+....
T Consensus 295 ~~~~~-~~-------------------~~~~~~~----g~gi~~~~----~g~~--~~ig~~~~~~~~~----------- 333 (536)
T TIGR01512 295 ARKRE-NV-------------------ESVEEVP----GEGVRAVV----DGGE--VRIGNPRSLEAAV----------- 333 (536)
T ss_pred HHhcC-CC-------------------cceEEec----CCeEEEEE----CCeE--EEEcCHHHHhhcC-----------
Confidence 97654 00 0001111 11122111 2332 2347776543221
Q ss_pred HHHHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHH
Q 003364 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETL 625 (826)
Q Consensus 546 ~~~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l 625 (826)
...+..+|.+++.++ .|..++|.+.++|+++|+++++|++|
T Consensus 334 -~~~~~~~~~~~~~v~--------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L 374 (536)
T TIGR01512 334 -GARPESAGKTIVHVA--------------------------------------RDGTYLGYILLSDEPRPDAAEAIAEL 374 (536)
T ss_pred -CcchhhCCCeEEEEE--------------------------------------ECCEEEEEEEEeccchHHHHHHHHHH
Confidence 014567788887777 68899999999999999999999999
Q ss_pred HHcCC-eEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHH
Q 003364 626 RKAGI-NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (826)
Q Consensus 626 ~~~Gi-~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 704 (826)
+++|+ +++|+|||+..++..+++++|+.
T Consensus 375 ~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------------------------------------- 403 (536)
T TIGR01512 375 KALGIEKVVMLTGDRRAVAERVARELGID--------------------------------------------------- 403 (536)
T ss_pred HHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------------------------------------
Confidence 99999 99999999999999999999982
Q ss_pred HHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC-CchHHHHhhccc
Q 003364 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAARAADY 783 (826)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g-n~~~~~~~~Ad~ 783 (826)
.+|+++.|++|..+++.++..+++|+|+|||.||++|++.||+||+| | ++.+..+..||+
T Consensus 404 ------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~~ad~ 464 (536)
T TIGR01512 404 ------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM-GASGSDVAIETADV 464 (536)
T ss_pred ------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEe-CCCccHHHHHhCCE
Confidence 23456789999999999999999999999999999999999999999 6 566666779999
Q ss_pred cc--cchhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHhhh
Q 003364 784 SI--GKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI 825 (826)
Q Consensus 784 v~--~~~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~~~ 825 (826)
++ +++..+.. .+..||.+++++++++.|++.+|++.+.+.+
T Consensus 465 vl~~~~l~~l~~-~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~ 507 (536)
T TIGR01512 465 VLLNDDLSRLPQ-AIRLARRTRRIVKQNVVIALGIILLLILLAL 507 (536)
T ss_pred EEECCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 66677766 4678999999999999999999987665543
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=9.1e-60 Score=534.40 Aligned_cols=456 Identities=20% Similarity=0.236 Sum_probs=347.5
Q ss_pred hHhhcceEEEEEeC-CeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcCCCCCCCCceeeeccccccC
Q 003364 95 DKKANEKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMG 173 (826)
Q Consensus 95 ~~~~~~~~~~V~r~-g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes~lTGEs~p~~K~~~~~~~~ 173 (826)
+.++.|.+++++|+ |++++|++++|+|||+|.|++||+|||||+|+ +|.+.||||+|||||.|+.|
T Consensus 85 L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~-----~g~~~vdes~lTGEs~pv~k-------- 151 (562)
T TIGR01511 85 LAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVI-----EGESEVDESLVTGESLPVPK-------- 151 (562)
T ss_pred HHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEE-----ECceEEehHhhcCCCCcEEc--------
Confidence 45667889999985 66799999999999999999999999999999 78899999999999999999
Q ss_pred CCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceEEEEEEEeCCcceeeccCC-
Q 003364 174 MDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG- 252 (826)
Q Consensus 174 ~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~~~~V~~tG~~T~~~~~~~- 252 (826)
..++.+|+||.+.+| .+.+.|+++|.+|.++++.+
T Consensus 152 -------------------------------------------~~gd~V~aGt~~~~g-~~~~~v~~~g~~t~~~~i~~~ 187 (562)
T TIGR01511 152 -------------------------------------------KVGDPVIAGTVNGTG-SLVVRATATGEDTTLAQIVRL 187 (562)
T ss_pred -------------------------------------------CCCCEEEeeeEECCc-eEEEEEEEecCCChHHHHHHH
Confidence 346789999999999 79999999999999998755
Q ss_pred --CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccchhhhhhhHHHHHhcccccce
Q 003364 253 --IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPIS 330 (826)
Q Consensus 253 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~ 330 (826)
..+.+++++++.+++++.++.+++++++++.+++|.. .+ ...+.++..++|++
T Consensus 188 v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~~----------------------~~---~~~~svlvvacPca 242 (562)
T TIGR01511 188 VRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLF----------------------AL---EFAVTVLIIACPCA 242 (562)
T ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HH---HHHHHHHHHhccch
Confidence 3556779999999999999988888777766654310 11 11222344455665
Q ss_pred ehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccceeeEEEEEEcCeeecCCCCCc
Q 003364 331 IKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDA 410 (826)
Q Consensus 331 l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~ 410 (826)
|+++..++...... ++.+ +++++|++.++|.|+++|++|||||||||+|+|++.++...+..
T Consensus 243 L~la~p~a~~~~~~------~aa~----~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~-------- 304 (562)
T TIGR01511 243 LGLATPTVIAVATG------LAAK----NGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR-------- 304 (562)
T ss_pred hhhHHHHHHHHHHH------HHHH----CCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC--------
Confidence 55444444333322 2222 35999999999999999999999999999999999998642210
Q ss_pred ccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEE
Q 003364 411 LKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVL 490 (826)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~ 490 (826)
+ ..+++...+.+. ..+.||.++|+++++++.+...... .
T Consensus 305 -------------~--~~~~l~~aa~~e-------------~~s~HPia~Ai~~~~~~~~~~~~~~-------------~ 343 (562)
T TIGR01511 305 -------------D--RTELLALAAALE-------------AGSEHPLAKAIVSYAKEKGITLVEV-------------S 343 (562)
T ss_pred -------------C--HHHHHHHHHHHh-------------ccCCChHHHHHHHHHHhcCCCcCCC-------------C
Confidence 0 112222221111 1246999999999998766432100 0
Q ss_pred EEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHHHHHHHcCCeEEEEEEEecCHHHH
Q 003364 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEY 570 (826)
Q Consensus 491 ~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~G~rvl~~A~k~l~~~~~ 570 (826)
.+ ..+| .+.+...+ ++. -+..|+++.+.+... . +..+..+|.+++.++
T Consensus 344 ~~---~~~~----g~Gi~~~~----~g~--~~~iG~~~~~~~~~~--~--------~~~~~~~g~~~~~~~--------- 391 (562)
T TIGR01511 344 DF---KAIP----GIGVEGTV----EGT--KIQLGNEKLLGENAI--K--------IDGKAEQGSTSVLVA--------- 391 (562)
T ss_pred Ce---EEEC----CceEEEEE----CCE--EEEEECHHHHHhCCC--C--------CChhhhCCCEEEEEE---------
Confidence 01 1111 22222222 232 245688877643211 0 112457899999888
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 003364 571 QEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (826)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~ 650 (826)
.|.+++|++.++|+++|+++++|++|++.|++++|+|||+...+..+++++
T Consensus 392 -----------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~l 442 (562)
T TIGR01511 392 -----------------------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL 442 (562)
T ss_pred -----------------------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHc
Confidence 689999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCc
Q 003364 651 NFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP 730 (826)
Q Consensus 651 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p 730 (826)
|+. +++++.|
T Consensus 443 gi~----------------------------------------------------------------------~~~~~~p 452 (562)
T TIGR01511 443 GIN----------------------------------------------------------------------VRAEVLP 452 (562)
T ss_pred CCc----------------------------------------------------------------------EEccCCh
Confidence 971 4456789
Q ss_pred ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcccccc--chhcchhheeecchhhHHHHHH
Q 003364 731 SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG--KFRFLKRLILVHGRYSYNRTAF 808 (826)
Q Consensus 731 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~--~~~~l~~l~l~~gr~~~~~~~~ 808 (826)
++|..+++.++..+++|+|+|||.||++|++.||+||+| |++.+..+..||+++. +...+.. ++..||.+++++++
T Consensus 453 ~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~-g~g~~~a~~~Advvl~~~~l~~l~~-~i~lsr~~~~~i~q 530 (562)
T TIGR01511 453 DDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAI-GAGTDVAIEAADVVLMRNDLNDVAT-AIDLSRKTLRRIKQ 530 (562)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEe-CCcCHHHHhhCCEEEeCCCHHHHHH-HHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 7666656679999995 4455555 35679999999999
Q ss_pred HHHHHhhhhHHHHHhh
Q 003364 809 LSQYSFYKSLLICFIQ 824 (826)
Q Consensus 809 ~~~~~~~~~~~~~~~~ 824 (826)
++.|++.+|++.+.+.
T Consensus 531 n~~~a~~~n~~~i~la 546 (562)
T TIGR01511 531 NLLWAFGYNVIAIPIA 546 (562)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999876554
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.3e-58 Score=550.91 Aligned_cols=485 Identities=19% Similarity=0.195 Sum_probs=367.8
Q ss_pred hhhhHHHHHHHHhhh------hhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEE
Q 003364 79 VSATKEAWDDYNRYL------SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVE 152 (826)
Q Consensus 79 ~~~~~~~~~~~~~~~------~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vd 152 (826)
+..+.++++++-+.+ ++.++.|++++|+|+|++++|+.++|+|||+|.|++||+|||||+|+ +|.+.||
T Consensus 295 ~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~-----~g~~~vd 369 (834)
T PRK10671 295 LINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT-----QGEAWLD 369 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE-----EceEEEe
Confidence 334445555554433 24456788999999999999999999999999999999999999999 7889999
Q ss_pred cCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCc
Q 003364 153 TAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTE 232 (826)
Q Consensus 153 es~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~ 232 (826)
||+|||||.|+.| ..++.+++||.+.+|
T Consensus 370 eS~lTGEs~pv~k---------------------------------------------------~~gd~V~aGt~~~~G- 397 (834)
T PRK10671 370 EAMLTGEPIPQQK---------------------------------------------------GEGDSVHAGTVVQDG- 397 (834)
T ss_pred ehhhcCCCCCEec---------------------------------------------------CCCCEEEecceecce-
Confidence 9999999999999 356789999999999
Q ss_pred eEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCcc
Q 003364 233 WACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPW 309 (826)
Q Consensus 233 ~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (826)
.+.+.|+++|.+|.++++.+ ..+..++++++.+++++.++.+++++++++.+++|++.. ....|
T Consensus 398 ~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~-------------~~~~~ 464 (834)
T PRK10671 398 SVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFG-------------PAPQI 464 (834)
T ss_pred eEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------------CchHH
Confidence 79999999999999998654 445667899999999999999888888877766643211 00011
Q ss_pred chhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCcccccc
Q 003364 310 YELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTEN 389 (826)
Q Consensus 310 ~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~ 389 (826)
...+..++ .++..++|++|+.+..++...+.. ++.+ +++++|+++++|.||++|++|||||||||+|
T Consensus 465 ~~~~~~a~---~vlv~acPcaL~la~p~a~~~~~~------~~a~----~gilvk~~~~le~l~~v~~v~fDKTGTLT~g 531 (834)
T PRK10671 465 VYTLVIAT---TVLIIACPCALGLATPMSIISGVG------RAAE----FGVLVRDADALQRASTLDTLVFDKTGTLTEG 531 (834)
T ss_pred HHHHHHHH---HHHHHhcccchhhhHHHHHHHHHH------HHHH----CCeEEecHHHHHhhcCCCEEEEcCCCccccC
Confidence 11222122 234456677766555555444433 2222 3599999999999999999999999999999
Q ss_pred eeeEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHH-HhhhceeeecccCCCCceeeecCCccHHHHHHHHHh
Q 003364 390 RMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLT-VMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ 468 (826)
Q Consensus 390 ~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~ 468 (826)
+|+|.++...+.. + ..+++. +.+++. .+.||.++|+++++..
T Consensus 532 ~~~v~~~~~~~~~---------------------~--~~~~l~~a~~~e~--------------~s~hp~a~Ai~~~~~~ 574 (834)
T PRK10671 532 KPQVVAVKTFNGV---------------------D--EAQALRLAAALEQ--------------GSSHPLARAILDKAGD 574 (834)
T ss_pred ceEEEEEEccCCC---------------------C--HHHHHHHHHHHhC--------------CCCCHHHHHHHHHHhh
Confidence 9999987632210 0 011222 222222 1469999999998864
Q ss_pred CCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhcCCChhHHHHHHH
Q 003364 469 LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVE 548 (826)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~~~~~~~~~~~~~ 548 (826)
.... ...+++.. | .+.+... . +|.. +..|+++.+..... ..+.+...++
T Consensus 575 ~~~~---------------~~~~~~~~---~----g~Gv~~~--~--~g~~--~~~G~~~~~~~~~~---~~~~~~~~~~ 623 (834)
T PRK10671 575 MTLP---------------QVNGFRTL---R----GLGVSGE--A--EGHA--LLLGNQALLNEQQV---DTKALEAEIT 623 (834)
T ss_pred CCCC---------------CcccceEe---c----ceEEEEE--E--CCEE--EEEeCHHHHHHcCC---ChHHHHHHHH
Confidence 3210 00011110 0 0111111 1 3432 45699987754321 2345667778
Q ss_pred HHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHc
Q 003364 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (826)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~ 628 (826)
.+..+|.+++.+| .|..++|++++.|+++|+++++|++|++.
T Consensus 624 ~~~~~g~~~v~va--------------------------------------~~~~~~g~~~l~d~~r~~a~~~i~~L~~~ 665 (834)
T PRK10671 624 AQASQGATPVLLA--------------------------------------VDGKAAALLAIRDPLRSDSVAALQRLHKA 665 (834)
T ss_pred HHHhCCCeEEEEE--------------------------------------ECCEEEEEEEccCcchhhHHHHHHHHHHC
Confidence 8889999999999 47789999999999999999999999999
Q ss_pred CCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHH
Q 003364 629 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH 708 (826)
Q Consensus 629 Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 708 (826)
|++++|+|||+..++..+++++|+
T Consensus 666 gi~v~~~Tgd~~~~a~~ia~~lgi-------------------------------------------------------- 689 (834)
T PRK10671 666 GYRLVMLTGDNPTTANAIAKEAGI-------------------------------------------------------- 689 (834)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCC--------------------------------------------------------
Confidence 999999999999999999999998
Q ss_pred HHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccc-
Q 003364 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK- 787 (826)
Q Consensus 709 ~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~- 787 (826)
..+++++.|++|.++++.++..+++|+|+|||.||++|++.||+||+| |++.+.++++||+++..
T Consensus 690 -------------~~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~-g~g~~~a~~~ad~vl~~~ 755 (834)
T PRK10671 690 -------------DEVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM-GGGSDVAIETAAITLMRH 755 (834)
T ss_pred -------------CEEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe-cCCCHHHHHhCCEEEecC
Confidence 246677889999999999999999999999999999999999999999 88888888899999854
Q ss_pred -hhcchhheeecchhhHHHHHHHHHHHhhhhHHHHHh
Q 003364 788 -FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFI 823 (826)
Q Consensus 788 -~~~l~~l~l~~gr~~~~~~~~~~~~~~~~~~~~~~~ 823 (826)
+..+.. .+..||..+.++++++.|++.+|++.+.+
T Consensus 756 ~~~~i~~-~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~ 791 (834)
T PRK10671 756 SLMGVAD-ALAISRATLRNMKQNLLGAFIYNSLGIPI 791 (834)
T ss_pred CHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555 35679999999999999999999877654
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-50 Score=410.30 Aligned_cols=461 Identities=22% Similarity=0.251 Sum_probs=333.5
Q ss_pred hhhHHHHHHHHhhhh---hHhhc-ceEEEEEeC-CeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceEEEEcC
Q 003364 80 SATKEAWDDYNRYLS---DKKAN-EKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETA 154 (826)
Q Consensus 80 ~~~~~~~~~~~~~~~---~~~~~-~~~~~V~r~-g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~~Vdes 154 (826)
.-+.+.+.+-|-..+ +++.. ...++++++ |.++.+++.+|+.||+|.++.||.||+||.++ +|.++||||
T Consensus 79 ANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVI-----eG~asVdES 153 (681)
T COG2216 79 ANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVI-----EGVASVDES 153 (681)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEE-----eeeeecchh
Confidence 334555555543222 23222 234566665 89999999999999999999999999999999 899999999
Q ss_pred CCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeecceeecCceE
Q 003364 155 ALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWA 234 (826)
Q Consensus 155 ~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v~~g~~~ 234 (826)
.+||||-|+.|.++- .-+.+-.||.+.+. |.
T Consensus 154 AITGESaPViresGg------------------------------------------------D~ssVtGgT~v~SD-~l 184 (681)
T COG2216 154 AITGESAPVIRESGG------------------------------------------------DFSSVTGGTRVLSD-WL 184 (681)
T ss_pred hccCCCcceeeccCC------------------------------------------------CcccccCCcEEeee-eE
Confidence 999999999996541 12337788999876 99
Q ss_pred EEEEEEeCCcceeecc---CCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCCCCccch
Q 003364 235 CGVAVYTGNETKLGMT---RGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYE 311 (826)
Q Consensus 235 ~~~V~~tG~~T~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (826)
...+...--+|.+-++ .+.++.+++|-|..+.-+...+.++.++.. ..++.+ . .|. .... ..
T Consensus 185 ~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~~~---~Tl~p~-a-------~y~---~g~~-~~ 249 (681)
T COG2216 185 KIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLLAV---ATLYPF-A-------IYS---GGGA-AS 249 (681)
T ss_pred EEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHHHH---HhhhhH-H-------HHc---CCCC-cC
Confidence 9999998888988875 445667778877776654433322222111 111100 0 010 0011 11
Q ss_pred hhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccccccceEEEecCCccccccee
Q 003364 312 LLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRM 391 (826)
Q Consensus 312 ~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~lg~v~~i~~DKTGTLT~~~~ 391 (826)
. .....++.+++|..+--.++..-..++- ++.+- +++.+++.++|.+|.||+++.|||||+|-|+-
T Consensus 250 i----~~LiALlV~LIPTTIGgLLsAIGIAGMd------Rv~~~----NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR 315 (681)
T COG2216 250 V----TVLVALLVCLIPTTIGGLLSAIGIAGMD------RVTQF----NVIATSGRAVEAAGDVDTLLLDKTGTITLGNR 315 (681)
T ss_pred H----HHHHHHHHHHhcccHHHHHHHhhhhhhh------Hhhhh----ceeecCcchhhhcCCccEEEecccCceeecch
Confidence 1 1112256667887643333322222221 22222 38889999999999999999999999999976
Q ss_pred eEEEEEEcCeeecCCCCCcccchhhhhhhccCCchHHHHHHHhhhceeeecccCCCCceeeecCCccHHHHHHHHHhCCe
Q 003364 392 IFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHM 471 (826)
Q Consensus 392 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~ 471 (826)
.-.+++..+ .-+..++..+...+.= .-..|..+++++.|++.++
T Consensus 316 ~A~~f~p~~-----------------------gv~~~~la~aa~lsSl-------------~DeTpEGrSIV~LA~~~~~ 359 (681)
T COG2216 316 QASEFIPVP-----------------------GVSEEELADAAQLASL-------------ADETPEGRSIVELAKKLGI 359 (681)
T ss_pred hhhheecCC-----------------------CCCHHHHHHHHHHhhh-------------ccCCCCcccHHHHHHHhcc
Confidence 555544221 1122334443333321 1257889999999998875
Q ss_pred EEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEecCCCeEEEEecCchhhhhhhhhc--CCChhHHHHHHHH
Q 003364 472 VLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--GQQTRTFVEAVEQ 549 (826)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~~~~~~~~~~KGa~e~i~~~~~~--~~~~~~~~~~~~~ 549 (826)
....+.. . ......||+.+.+++.+-... + .-+.||+.+.+..+.+. ++.|+.++..+++
T Consensus 360 ~~~~~~~----------~---~~~~fvpFtA~TRmSGvd~~~---~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~ 421 (681)
T COG2216 360 ELREDDL----------Q---SHAEFVPFTAQTRMSGVDLPG---G--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDE 421 (681)
T ss_pred CCCcccc----------c---ccceeeecceecccccccCCC---C--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 4322110 0 023467999888777765432 2 56789999999998873 4468899999999
Q ss_pred HHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHcC
Q 003364 550 YSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAG 629 (826)
Q Consensus 550 ~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~G 629 (826)
.++.|-++++++ .|..++|.+.++|-++|+.+|-+.+||+.|
T Consensus 422 vs~~GGTPL~V~--------------------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~Mg 463 (681)
T COG2216 422 VSRLGGTPLVVV--------------------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMG 463 (681)
T ss_pred HHhcCCCceEEE--------------------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcC
Confidence 999999999999 689999999999999999999999999999
Q ss_pred CeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcChhHHHHHHHH
Q 003364 630 INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHY 709 (826)
Q Consensus 630 i~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 709 (826)
|+.+|+|||++.||..+|++.|++
T Consensus 464 IkTvM~TGDN~~TAa~IA~EAGVD-------------------------------------------------------- 487 (681)
T COG2216 464 IKTVMITGDNPLTAAAIAAEAGVD-------------------------------------------------------- 487 (681)
T ss_pred CeEEEEeCCCHHHHHHHHHHhCch--------------------------------------------------------
Confidence 999999999999999999999982
Q ss_pred HHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccc
Q 003364 710 RKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785 (826)
Q Consensus 710 ~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~ 785 (826)
...++.+|++|.++++.-|..++-|+|+|||.||+|+|.+||||+|| .++...+|+++++|=
T Consensus 488 -------------dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM-NsGTqAAkEAaNMVD 549 (681)
T COG2216 488 -------------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAANMVD 549 (681)
T ss_pred -------------hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh-ccccHHHHHhhcccc
Confidence 23468899999999999999999999999999999999999999999 555555666999986
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.97 E-value=5.1e-30 Score=261.08 Aligned_cols=222 Identities=24% Similarity=0.398 Sum_probs=171.2
Q ss_pred hhhhhhhhhhHHHHHHHHhhhhhHhh---cceE-EEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCce
Q 003364 73 LIFIFAVSATKEAWDDYNRYLSDKKA---NEKE-VWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (826)
Q Consensus 73 l~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~ 148 (826)
++++++++.+++.++++++.+..+++ .+++ ++|+|||+++++++++|+|||||.|++||++||||+|++ +|.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g~ 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SSE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee----ccc
Confidence 34566677778899998887776654 3455 999999999999999999999999999999999999994 288
Q ss_pred EEEEcCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCCCCccceeeEEEEeCCCCCCCCccccccCceeeeccee
Q 003364 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (826)
Q Consensus 149 ~~Vdes~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~f~g~~~l~~~~~~~~~~~~~~~n~v~~Gt~v 228 (826)
+.||||.+|||+.|+.|.+. +...+|.+++||.+
T Consensus 78 ~~vd~s~ltGes~pv~k~~~----------------------------------------------~~~~~~~i~~Gs~v 111 (230)
T PF00122_consen 78 AYVDESALTGESEPVKKTPL----------------------------------------------PLNPGNIIFAGSIV 111 (230)
T ss_dssp EEEECHHHHSBSSEEEESSS----------------------------------------------CCCTTTEE-TTEEE
T ss_pred cccccccccccccccccccc----------------------------------------------cccccchhhccccc
Confidence 99999999999999999532 22578999999999
Q ss_pred ecCceEEEEEEEeCCcceeeccCC---CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcchhccccccccceeeCCC
Q 003364 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ 305 (826)
Q Consensus 229 ~~g~~~~~~V~~tG~~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (826)
.+| +++++|++||.+|..+++.+ ..+.+++++++.++++..+++++.+++++++++++..+ ..
T Consensus 112 ~~g-~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 177 (230)
T PF00122_consen 112 VSG-WGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN-------------DS 177 (230)
T ss_dssp EEE-EEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG-------------ST
T ss_pred ccc-ccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec-------------cc
Confidence 977 89999999999999998655 34556799999999999999888887777766554321 01
Q ss_pred CCccchhhhhhhHHHHHhcccccceehhhHHHHHHHHHHHhhccccCCCCCCCCcccccccccccc
Q 003364 306 EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISED 371 (826)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~~iP~~l~v~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~e~ 371 (826)
..+|...+ ..++.++..++|++|++++.++...++.+ +.+. ++++|+++++|+
T Consensus 178 ~~~~~~~~---~~~i~~l~~~~P~~l~~~~~~~~~~~~~~------~~~~----~i~v~~~~a~E~ 230 (230)
T PF00122_consen 178 GISFFKSF---LFAISLLIVLIPCALPLALPLSLAIAARR------LAKN----GIIVKNLSALEA 230 (230)
T ss_dssp TCHCCHHH---HHHHHHHHHHS-TTHHHHHHHHHHHHHHH------HHHT----TEEESSTTHHHH
T ss_pred cccccccc---ccccceeeeecccceeehHHHHHHHHHHH------HHHC----CEEEeCcccccC
Confidence 22333333 34445677889999999998888887763 3333 388999998874
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.86 E-value=8.9e-22 Score=198.85 Aligned_cols=98 Identities=31% Similarity=0.487 Sum_probs=91.9
Q ss_pred cCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHH
Q 003364 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERV 679 (826)
Q Consensus 600 ~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (826)
.++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..++..+++++||.
T Consensus 114 ~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~-------------------------- 167 (215)
T PF00702_consen 114 VNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF-------------------------- 167 (215)
T ss_dssp ESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC--------------------------
T ss_pred ecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc--------------------------
Confidence 388999999999999999999999999999999999999999999999999981
Q ss_pred HHHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe--CcccH--HHHHHHhhcCCCeEEEEcCCcc
Q 003364 680 LLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TPSQK--AQLVELLKSCDYRTLAIGDGGN 755 (826)
Q Consensus 680 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~p~~K--~~iv~~l~~~~~~v~~iGDg~N 755 (826)
...+++++ +|.+| .++++.|+..+++|+|+|||.|
T Consensus 168 -----------------------------------------~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~n 206 (215)
T PF00702_consen 168 -----------------------------------------DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVN 206 (215)
T ss_dssp -----------------------------------------SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGG
T ss_pred -----------------------------------------cccccccccccccchhHHHHHHHHhcCCCEEEEEccCHH
Confidence 14688899 99999 9999999987779999999999
Q ss_pred cHHhHHhCC
Q 003364 756 DVRMIQKAD 764 (826)
Q Consensus 756 D~~ml~~A~ 764 (826)
|++|+++||
T Consensus 207 D~~al~~Ag 215 (215)
T PF00702_consen 207 DAPALKAAG 215 (215)
T ss_dssp HHHHHHHSS
T ss_pred HHHHHHhCc
Confidence 999999997
No 36
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.64 E-value=6.4e-16 Score=160.84 Aligned_cols=182 Identities=24% Similarity=0.304 Sum_probs=118.5
Q ss_pred EEEeecc-ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecCCCH-------HHHHHH
Q 003364 606 GVTAIED-RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKTE-------DEVCRS 675 (826)
Q Consensus 606 G~i~~~d-~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~~~~-------~~~~~~ 675 (826)
|.+.-.+ ++++.++++|++++++|++++++|||++..+..+.+++++..+ ..+|..+...++.. +.....
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 3333344 3999999999999999999999999999999999999999764 33344443333322 122222
Q ss_pred HHHHHHH--c--ccccC--------C----------------------CC---ceEEEEcChhHHHHHHHHHHHHhh--h
Q 003364 676 LERVLLT--M--RITTS--------E----------------------PK---DVAFVVDGWALEIALKHYRKAFTE--L 716 (826)
Q Consensus 676 ~~~~~~~--~--~~~~~--------~----------------------~~---~~~l~~~g~~~~~~~~~~~~~~~~--~ 716 (826)
....... . ..... . .. ...+...........+...+.+.. .
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 2111111 0 00000 0 00 001111223344444445555442 2
Q ss_pred ccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 717 AILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 717 ~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
........+.++.|. +|+..++.+.+ ..++|++||||.||++||+.||.|||| +|+.+++|+.||+++.++
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam-~Na~~~~k~~A~~vt~~n 248 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM-GNADEELKELADYVTTSN 248 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec-cCCCHHHHhhCCcccCCc
Confidence 233334445899998 69987777765 346799999999999999999999999 999999999999888665
No 37
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.63 E-value=1.1e-15 Score=159.70 Aligned_cols=183 Identities=20% Similarity=0.250 Sum_probs=115.3
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC-----CCCCcEEEe--cCCCH----
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-----EPKGQLLSI--DGKTE---- 669 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~-----~~~~~~~~~--~~~~~---- 669 (826)
|.|++.- ...+++.++++|++++++|++++++|||++..+..+++++++..+ ..+|..+.. +++.+
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 5555532 346999999999999999999999999999999999999997542 234444432 23221
Q ss_pred ---HHHHHHHHHHHHHccc------------ccC--------------------------CC-CceEE-EEcC-hhHHHH
Q 003364 670 ---DEVCRSLERVLLTMRI------------TTS--------------------------EP-KDVAF-VVDG-WALEIA 705 (826)
Q Consensus 670 ---~~~~~~~~~~~~~~~~------------~~~--------------------------~~-~~~~l-~~~g-~~~~~~ 705 (826)
+.....++ ....... ... .. ....+ +... ......
T Consensus 88 l~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 166 (270)
T PRK10513 88 LSYDDYLYLEK-LSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAA 166 (270)
T ss_pred CCHHHHHHHHH-HHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHH
Confidence 22211111 1110000 000 00 00001 1111 111222
Q ss_pred HHHHHHHHh-hhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHH
Q 003364 706 LKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778 (826)
Q Consensus 706 ~~~~~~~~~-~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~ 778 (826)
.+.+.+.+. .+........+.+++|. +|+..++.+.+ ..++|++||||.||++||+.||+|||| +|+.+++|
T Consensus 167 ~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~NA~~~vK 245 (270)
T PRK10513 167 IARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM-GNAIPSVK 245 (270)
T ss_pred HHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe-cCccHHHH
Confidence 222222221 22223334457899987 69987777654 467899999999999999999999999 99999999
Q ss_pred hhccccccch
Q 003364 779 RAADYSIGKF 788 (826)
Q Consensus 779 ~~Ad~v~~~~ 788 (826)
+.||+|+.++
T Consensus 246 ~~A~~vt~~n 255 (270)
T PRK10513 246 EVAQFVTKSN 255 (270)
T ss_pred HhcCeeccCC
Confidence 9999999765
No 38
>PRK10976 putative hydrolase; Provisional
Probab=99.63 E-value=1.6e-15 Score=158.19 Aligned_cols=184 Identities=20% Similarity=0.160 Sum_probs=114.9
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEE-ecCCCHH-------
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-IDGKTED------- 670 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~-~~~~~~~------- 670 (826)
|.|++.- ...+++.++++|++++++|++++++|||++..+..+++.+|+..+ ..+|.++. .++..+.
T Consensus 10 DGTLl~~---~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~ 86 (266)
T PRK10976 10 DGTLLSP---DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRD 86 (266)
T ss_pred CCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHH
Confidence 5555521 335899999999999999999999999999999999999998654 23444443 2333221
Q ss_pred HHHHHHHHHHH--Hcc--cccC--------------------------------CCCceEEEE-cC--hhHHHHHHHHHH
Q 003364 671 EVCRSLERVLL--TMR--ITTS--------------------------------EPKDVAFVV-DG--WALEIALKHYRK 711 (826)
Q Consensus 671 ~~~~~~~~~~~--~~~--~~~~--------------------------------~~~~~~l~~-~g--~~~~~~~~~~~~ 711 (826)
.....+..... ... .... ......+.+ .. ...+.+.+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~ 166 (266)
T PRK10976 87 IASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINA 166 (266)
T ss_pred HHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHH
Confidence 11111111100 000 0000 000001111 11 122222223333
Q ss_pred HHh-hhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhcc--
Q 003364 712 AFT-ELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD-- 782 (826)
Q Consensus 712 ~~~-~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad-- 782 (826)
.+. .+........+.+++|. +|+..++.+.+ ..++|++||||.||++||+.||+|||| +|+.+++|+.||
T Consensus 167 ~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm-~NA~~~vK~~A~~~ 245 (266)
T PRK10976 167 RWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM-GNAHQRLKDLLPEL 245 (266)
T ss_pred HhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee-cCCcHHHHHhCCCC
Confidence 332 12222333457899997 59987777654 467899999999999999999999999 999999999987
Q ss_pred ccccch
Q 003364 783 YSIGKF 788 (826)
Q Consensus 783 ~v~~~~ 788 (826)
+|+.++
T Consensus 246 ~v~~~n 251 (266)
T PRK10976 246 EVIGSN 251 (266)
T ss_pred eecccC
Confidence 777655
No 39
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.62 E-value=4.8e-15 Score=154.89 Aligned_cols=184 Identities=18% Similarity=0.165 Sum_probs=115.5
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEE-ecCCC-------HH
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-IDGKT-------ED 670 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~-~~~~~-------~~ 670 (826)
|.|++. -...+.+.++++|++|+++|++++++|||+...+..+++++|+..+ ..+|..+. .++.. .+
T Consensus 10 DGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 555553 1346999999999999999999999999999999999999998644 23444443 22221 12
Q ss_pred HHHHHHHHHHHH-c--ccc--------c------------------------CCCCceEEEE--cChhHHHHHHHHHHHH
Q 003364 671 EVCRSLERVLLT-M--RIT--------T------------------------SEPKDVAFVV--DGWALEIALKHYRKAF 713 (826)
Q Consensus 671 ~~~~~~~~~~~~-~--~~~--------~------------------------~~~~~~~l~~--~g~~~~~~~~~~~~~~ 713 (826)
.....+...... . ... . .......+.+ .....+.+.+.+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~ 166 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEAL 166 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHh
Confidence 222211111100 0 000 0 0000011111 1122223333333333
Q ss_pred h-hhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccc--c
Q 003364 714 T-ELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY--S 784 (826)
Q Consensus 714 ~-~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~--v 784 (826)
. .+........+.+++|. +|+..++.+.+ ..++|++||||.||++||+.||+|||| +|+.+++|+.||+ +
T Consensus 167 ~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~Na~~~vK~~A~~~~v 245 (272)
T PRK15126 167 GERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM-GNAMPQLRAELPHLPV 245 (272)
T ss_pred cCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec-cCChHHHHHhCCCCee
Confidence 2 22222233457899998 59988877754 457899999999999999999999999 9999999999987 6
Q ss_pred ccch
Q 003364 785 IGKF 788 (826)
Q Consensus 785 ~~~~ 788 (826)
+.++
T Consensus 246 ~~~n 249 (272)
T PRK15126 246 IGHC 249 (272)
T ss_pred cCCC
Confidence 6554
No 40
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.56 E-value=4.2e-14 Score=144.18 Aligned_cols=173 Identities=22% Similarity=0.269 Sum_probs=108.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEec--CCC-----HHHHHHHHHHHHHHc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID--GKT-----EDEVCRSLERVLLTM 683 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~ 683 (826)
.+++.+.++|++++++|++++++|||+...+..+++.+|+..+ ..+|..+... +.. .......+.......
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 4889999999999999999999999999999999999998644 2344444322 211 111111122111111
Q ss_pred c-----cccCC--CCceEEE-EcChhHHHHHHHHHHHHh-hhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEE
Q 003364 684 R-----ITTSE--PKDVAFV-VDGWALEIALKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTL 748 (826)
Q Consensus 684 ~-----~~~~~--~~~~~l~-~~g~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~ 748 (826)
. ..... .....+. ......+...+.+ +.+. ...... ...+.++.|. +|+..++.+.+ ..++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~-~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i 177 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELL-EELGLDLEIVD-SGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVA 177 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHH-HHcCCcEEEEe-cceEEEEeeCCCChHHHHHHHHHHhCCCHHHEE
Confidence 0 00000 0011111 1222222222222 2221 111112 2345688887 49877776654 467899
Q ss_pred EEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 749 AIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 749 ~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
+|||+.||++|++.||+|+|| +|+.+++|+.||+|+.++
T Consensus 178 ~~GD~~NDi~m~~~ag~~vam-~Na~~~vk~~a~~v~~~n 216 (230)
T PRK01158 178 AIGDSENDLEMFEVAGFGVAV-ANADEELKEAADYVTEKS 216 (230)
T ss_pred EECCchhhHHHHHhcCceEEe-cCccHHHHHhcceEecCC
Confidence 999999999999999999999 999999999999999765
No 41
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.54 E-value=3.8e-14 Score=120.16 Aligned_cols=127 Identities=23% Similarity=0.342 Sum_probs=109.8
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHH
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVL 680 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (826)
-+.+.+.++---++-+++.++|++|++. ++++++|||.+.+....|+-.|+..
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~-------------------------- 70 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV-------------------------- 70 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce--------------------------
Confidence 4567888888899999999999999999 9999999999999999999999721
Q ss_pred HHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhH
Q 003364 681 LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMI 760 (826)
Q Consensus 681 ~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml 760 (826)
..+++...|..|..+++.|+..++.|+|+|||.||.+||
T Consensus 71 -----------------------------------------~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laL 109 (152)
T COG4087 71 -----------------------------------------ERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILAL 109 (152)
T ss_pred -----------------------------------------eeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHh
Confidence 457778889999999999999999999999999999999
Q ss_pred HhCCccEEecC--CchHHHHhhccccccchhcchhhe
Q 003364 761 QKADIGVGISG--REGLQAARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 761 ~~A~vgIam~g--n~~~~~~~~Ad~v~~~~~~l~~l~ 795 (826)
+.||+||..-+ +..+.+..+||+++.+...+..++
T Consensus 110 r~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 110 READLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred hhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 99999997644 445556679999998776665543
No 42
>PLN02887 hydrolase family protein
Probab=99.54 E-value=2e-14 Score=161.14 Aligned_cols=185 Identities=17% Similarity=0.214 Sum_probs=114.6
Q ss_pred cCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC-----------CCCcEEE-ecCC
Q 003364 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-----------PKGQLLS-IDGK 667 (826)
Q Consensus 600 ~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~-----------~~~~~~~-~~~~ 667 (826)
-|.|++.- ...+.+.+++||++++++|++++++|||++..+..+++++++.... .+|.++. .+++
T Consensus 315 LDGTLLn~---d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NGA~I~d~~g~ 391 (580)
T PLN02887 315 MDGTLLNS---KSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQGLLVYGRQGR 391 (580)
T ss_pred CCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecCeEEEECCCc
Confidence 36666631 3469999999999999999999999999999999999998864321 1333332 1222
Q ss_pred C-------HHHHHHHHHHHHH-Hcc--cc-c----------------------C------------CCCceEEEEcChh-
Q 003364 668 T-------EDEVCRSLERVLL-TMR--IT-T----------------------S------------EPKDVAFVVDGWA- 701 (826)
Q Consensus 668 ~-------~~~~~~~~~~~~~-~~~--~~-~----------------------~------------~~~~~~l~~~g~~- 701 (826)
. .+.....+....+ .+. .. . . ......+.+.+..
T Consensus 392 ~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i~Ki~~~~~~e 471 (580)
T PLN02887 392 EIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADIQKVIFLDTAE 471 (580)
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCeeEEEEEcChH
Confidence 1 1222211111100 000 00 0 0 0000011111111
Q ss_pred --HHHHHHHHHHHHh-hhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCC
Q 003364 702 --LEIALKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 702 --~~~~~~~~~~~~~-~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (826)
.+.+.+.+.+.+. .+........+.+++|. +|+..++.|.+ ..++|++||||.||++||+.||+|||| +|
T Consensus 472 ~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM-gN 550 (580)
T PLN02887 472 GVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL-SN 550 (580)
T ss_pred HHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe-CC
Confidence 1111222222221 22333334457899998 59987777765 357899999999999999999999999 99
Q ss_pred chHHHHhhccccccch
Q 003364 773 EGLQAARAADYSIGKF 788 (826)
Q Consensus 773 ~~~~~~~~Ad~v~~~~ 788 (826)
+.+++|+.||+|+.++
T Consensus 551 A~eeVK~~Ad~VT~sN 566 (580)
T PLN02887 551 GAEKTKAVADVIGVSN 566 (580)
T ss_pred CCHHHHHhCCEEeCCC
Confidence 9999999999999765
No 43
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.53 E-value=9.4e-14 Score=144.02 Aligned_cols=178 Identities=20% Similarity=0.283 Sum_probs=119.9
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEE--------EecCCCHHHHHHHHHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLL--------SIDGKTEDEVCRSLERVL 680 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~--------~~~~~~~~~~~~~~~~~~ 680 (826)
...+++.++++|++++++|++++++|||++..+..+..++++..+ ..+|.++ ....-..+.....++...
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 346889999999999999999999999999999999999998633 2233333 222222222322222222
Q ss_pred HHc-ccc-----------c---------------------------CCCCceEEEEcChhHHHHHHHHHHHHhhh-cccc
Q 003364 681 LTM-RIT-----------T---------------------------SEPKDVAFVVDGWALEIALKHYRKAFTEL-AILS 720 (826)
Q Consensus 681 ~~~-~~~-----------~---------------------------~~~~~~~l~~~g~~~~~~~~~~~~~~~~~-~~~~ 720 (826)
..- ... . ....+..+..+......+.+.+.+.+... ....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 210 000 0 00011222222334455556666666543 4444
Q ss_pred ceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchh
Q 003364 721 RTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (826)
Q Consensus 721 ~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~ 789 (826)
....+.+++|. +|+..++.+.+ ..+++++|||+.||++||+.||.|||| +|+.+++++.|++++.+.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am-~na~~~~k~~a~~i~~~~~ 246 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM-GNATPELKKAADYITPSNN 246 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE-TTS-HHHHHHSSEEESSGT
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE-cCCCHHHHHhCCEEecCCC
Confidence 55677888887 69987777765 467999999999999999999999999 9999999999999996654
No 44
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.51 E-value=2.5e-13 Score=137.99 Aligned_cols=174 Identities=17% Similarity=0.208 Sum_probs=106.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecCC--C-----HHH--HHHHHHHHH-
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGK--T-----EDE--VCRSLERVL- 680 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~~--~-----~~~--~~~~~~~~~- 680 (826)
.+.+.++++|++++++|++++++|||++..+..+++.+|+..+ ..+|..+...+. . ... .........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 5889999999999999999999999999999999999995433 123333332221 0 000 000001000
Q ss_pred --HHcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcC
Q 003364 681 --LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGD 752 (826)
Q Consensus 681 --~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGD 752 (826)
...............+......+.. ....+.+...........+.++.|. +|+..++.+.+ ..+++++|||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD 173 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTV-REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD 173 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHH-HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC
Confidence 0000000001111112222122221 2222222211111122346788876 69877776654 4578999999
Q ss_pred CcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 753 GGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 753 g~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
+.||++|++.||+|+|| +|+.+++|+.||+|+.++
T Consensus 174 ~~NDi~m~~~ag~~vam-~Na~~~~k~~A~~vt~~~ 208 (225)
T TIGR01482 174 SENDIDLFEVPGFGVAV-ANAQPELKEWADYVTESP 208 (225)
T ss_pred CHhhHHHHHhcCceEEc-CChhHHHHHhcCeecCCC
Confidence 99999999999999999 999999999999999654
No 45
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.50 E-value=3.6e-13 Score=141.16 Aligned_cols=183 Identities=18% Similarity=0.154 Sum_probs=109.6
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEe--cCCC-------H
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI--DGKT-------E 669 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~--~~~~-------~ 669 (826)
|.|++. =...+.+.++++|++++++|++++++|||++..+..+++++++..+ ..+|.++.- +++. .
T Consensus 11 DGTLl~---~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~ 87 (272)
T PRK10530 11 DGTLLT---PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPV 87 (272)
T ss_pred CCceEC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCH
Confidence 555552 1235899999999999999999999999999999999999998653 233443331 2221 1
Q ss_pred HHHHHHHHHHHHH-ccc--c-------cC-----------------------------------CCCceEEEEcChh---
Q 003364 670 DEVCRSLERVLLT-MRI--T-------TS-----------------------------------EPKDVAFVVDGWA--- 701 (826)
Q Consensus 670 ~~~~~~~~~~~~~-~~~--~-------~~-----------------------------------~~~~~~l~~~g~~--- 701 (826)
+.....++...+. +.. . .. ......+......
T Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 167 (272)
T PRK10530 88 QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFALTHEDLPQ 167 (272)
T ss_pred HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEEecCCHHH
Confidence 2222211111110 000 0 00 0000111111111
Q ss_pred HHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchH
Q 003364 702 LEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (826)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (826)
.....+.+.+.+. +........+.++.|. +|+..++.+.+ ..+++++|||+.||++|++.||+|||| ||+.+
T Consensus 168 ~~~~~~~~~~~~~-~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam-gna~~ 245 (272)
T PRK10530 168 LQHFAKHVEHELG-LECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM-GNADD 245 (272)
T ss_pred HHHHHHHHhhhcC-ceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe-cCchH
Confidence 1111222222221 1111111234677776 59876665543 457899999999999999999999999 89999
Q ss_pred HHHhhccccccch
Q 003364 776 QAARAADYSIGKF 788 (826)
Q Consensus 776 ~~~~~Ad~v~~~~ 788 (826)
++|+.||+++.++
T Consensus 246 ~lk~~Ad~v~~~n 258 (272)
T PRK10530 246 AVKARADLVIGDN 258 (272)
T ss_pred HHHHhCCEEEecC
Confidence 9999999999765
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.49 E-value=3.6e-13 Score=135.44 Aligned_cols=173 Identities=17% Similarity=0.193 Sum_probs=109.8
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecCCCHH-------HHHHHHHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKTED-------EVCRSLERVLLT 682 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 682 (826)
.++.+.+.++|++|+++|++++++|||++..+..+++.+++..+ ..+|.++...+.... ............
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFP 96 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhh
Confidence 35999999999999999999999999999999999999998644 234444433221110 000000000000
Q ss_pred ccccc-CC-CCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCc
Q 003364 683 MRITT-SE-PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGG 754 (826)
Q Consensus 683 ~~~~~-~~-~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ 754 (826)
..... .. .....+.......+...+.... ..+.... ...+.+++|. +|+..++.+.. ..+++++|||+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ 173 (215)
T TIGR01487 97 RDRLSNEYPRASLVIMREGKDVDEVREIIKE--RGLNLVD-SGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSE 173 (215)
T ss_pred hhhcccccceeEEEEecCCccHHHHHHHHHh--CCeEEEe-cCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCH
Confidence 00000 01 1112222333333333332222 1122222 1345677776 69988877755 356799999999
Q ss_pred ccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 755 NDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 755 ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
||++|++.|++|+|| +|+.+++|+.||+++.++
T Consensus 174 ND~~ml~~ag~~vam-~na~~~~k~~A~~v~~~~ 206 (215)
T TIGR01487 174 NDIDLFRVVGFKVAV-ANADDQLKEIADYVTSNP 206 (215)
T ss_pred HHHHHHHhCCCeEEc-CCccHHHHHhCCEEcCCC
Confidence 999999999999999 999999999999999654
No 47
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.48 E-value=4.5e-13 Score=139.64 Aligned_cols=180 Identities=16% Similarity=0.173 Sum_probs=106.5
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCC-C--CCCCcEEEecC-----------
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSIDG----------- 666 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~-~--~~~~~~~~~~~----------- 666 (826)
|.|++. =...+.+.++++|++|+++|++++++|||+...+..+++++|+.. + ..+|..+....
T Consensus 15 DGTLL~---~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~ 91 (271)
T PRK03669 15 DGTLLD---SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRI 91 (271)
T ss_pred ccCCcC---CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEe
Confidence 555543 133567889999999999999999999999999999999999852 2 23444443321
Q ss_pred ---CCHHHHHHHHHHHHHHccc--------------------------ccCCCCceEEEEcCh--hHHHHHHHHHHHHhh
Q 003364 667 ---KTEDEVCRSLERVLLTMRI--------------------------TTSEPKDVAFVVDGW--ALEIALKHYRKAFTE 715 (826)
Q Consensus 667 ---~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~l~~~g~--~~~~~~~~~~~~~~~ 715 (826)
...+.....+....+.... .........+..... .+..+.+.+.+. .
T Consensus 92 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~ 169 (271)
T PRK03669 92 ISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAEL--G 169 (271)
T ss_pred ecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHC--C
Confidence 1122222222211111000 000000111222221 112222222211 2
Q ss_pred hccccceeEEEEeCcc--cHHHHHHHhh----c---CCCeEEEEcCCcccHHhHHhCCccEEecCCch-HH-----HHhh
Q 003364 716 LAILSRTAICCRVTPS--QKAQLVELLK----S---CDYRTLAIGDGGNDVRMIQKADIGVGISGREG-LQ-----AARA 780 (826)
Q Consensus 716 ~~~~~~~~i~~~~~p~--~K~~iv~~l~----~---~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~-~~-----~~~~ 780 (826)
+.... ...+.+++|. +|+..++.+. . ..++|++||||.||++||+.||+|||| ||+. +. .+..
T Consensus 170 ~~~~~-~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM-~~~~~~~~~l~~~~~~ 247 (271)
T PRK03669 170 LQFVQ-GARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV-KGLNREGVHLQDDDPA 247 (271)
T ss_pred CEEEe-cCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe-cCCCCCCcccccccCC
Confidence 22222 2246799986 6987665554 4 568899999999999999999999999 7554 22 3347
Q ss_pred ccccccc
Q 003364 781 ADYSIGK 787 (826)
Q Consensus 781 Ad~v~~~ 787 (826)
||+++..
T Consensus 248 ~~~~~~~ 254 (271)
T PRK03669 248 RVYRTQR 254 (271)
T ss_pred ceEeccC
Confidence 8888855
No 48
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.45 E-value=7.4e-14 Score=117.64 Aligned_cols=89 Identities=31% Similarity=0.402 Sum_probs=70.0
Q ss_pred hhceeeecccCCCCceeeecCCccHHHHHHHHHhCCeEEEeecCceEEEEeCCeEEEEEEEEeeccCCCCCceEEEEEec
Q 003364 435 AVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC 514 (826)
Q Consensus 435 ~~c~~~~~~~~~~~~~~~~~~~~~e~all~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~f~~~~k~~sviv~~~ 514 (826)
++||++....+++.......|+|+|.||++|+.+.|.... ....+..+++++.+||+|++|||+|+++
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~----------~~~~~~~~~~~~~~pF~S~rK~msvv~~-- 68 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID----------IKEIRSKYKIVAEIPFDSERKRMSVVVR-- 68 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc----------HHHHHhhcceeEEEccCcccceeEEEEe--
Confidence 4799887655543333225799999999999999864322 1334677999999999999999999998
Q ss_pred CCCeEEEEecCchhhhhhhhh
Q 003364 515 HSGNISLLSKGADEAILPYAH 535 (826)
Q Consensus 515 ~~~~~~~~~KGa~e~i~~~~~ 535 (826)
+++.+++|+|||||.|+++|+
T Consensus 69 ~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 69 NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred CCCEEEEEcCCChHHHHHhcC
Confidence 345678899999999999996
No 49
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.42 E-value=5.9e-13 Score=137.87 Aligned_cols=176 Identities=20% Similarity=0.288 Sum_probs=111.3
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEec-CCC-------HHHHHHHHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID-GKT-------EDEVCRSLERVLL 681 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~-~~~-------~~~~~~~~~~~~~ 681 (826)
.++++.+.++|++++++|++++++|||++..+..+++++++..+ ..+|..+... ++. .+.....+....+
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~ 94 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKK 94 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999987643 2334444322 221 1222222221111
Q ss_pred H-ccc----------ccCC-------------------------CC-ceEEEEcC--hhHHHHHHHHHH-HH-hhhcccc
Q 003364 682 T-MRI----------TTSE-------------------------PK-DVAFVVDG--WALEIALKHYRK-AF-TELAILS 720 (826)
Q Consensus 682 ~-~~~----------~~~~-------------------------~~-~~~l~~~g--~~~~~~~~~~~~-~~-~~~~~~~ 720 (826)
. ... .... .. ...+.+.. ...+.+.+.+.+ .+ ..+....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
T TIGR00099 95 HGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVS 174 (256)
T ss_pred cCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEE
Confidence 0 000 0000 00 00011111 111222222221 12 1232333
Q ss_pred ceeEEEEeCcc--cHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccch
Q 003364 721 RTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (826)
Q Consensus 721 ~~~i~~~~~p~--~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~ 788 (826)
....+.+++|. +|+..++.+.+ ..+++++|||+.||++|++.||+|+|| +|+.+++++.|++++.++
T Consensus 175 s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~-~na~~~~k~~a~~~~~~n 247 (256)
T TIGR00099 175 SGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM-GNADEELKALADYVTDSN 247 (256)
T ss_pred ecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe-cCchHHHHHhCCEEecCC
Confidence 34557899987 59988887765 357899999999999999999999999 899999999999999765
No 50
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.38 E-value=6.1e-12 Score=130.10 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=103.0
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecC-C-------------CHHHHHHHHH
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDG-K-------------TEDEVCRSLE 677 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~-~-------------~~~~~~~~~~ 677 (826)
..+.++++|++|+++|++++++|||+...+..+++++|+..+ ..+|.++...+ . ..+.....++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 445799999999999999999999999999999999998543 33444443321 1 1112222222
Q ss_pred HHHHH--ccc------------------------ccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc
Q 003364 678 RVLLT--MRI------------------------TTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS 731 (826)
Q Consensus 678 ~~~~~--~~~------------------------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~ 731 (826)
..... ... .........++......+.+.+.+.+ . .+.... ...+.++.|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~-s~~~~ei~~~ 173 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVE-L-GLEVTH-GNRFYHVLGA 173 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHH-c-CCEEEe-CCceEEEecC
Confidence 11110 000 00000111111111222222222211 1 122222 2246788886
Q ss_pred --cHHHHHHHhhc----C--CCeEEEEcCCcccHHhHHhCCccEEecCCch---HHHHhh--c-cccccch
Q 003364 732 --QKAQLVELLKS----C--DYRTLAIGDGGNDVRMIQKADIGVGISGREG---LQAARA--A-DYSIGKF 788 (826)
Q Consensus 732 --~K~~iv~~l~~----~--~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~---~~~~~~--A-d~v~~~~ 788 (826)
+|+..++.+.+ . .+++++|||+.||++||+.||+|||| +|+. +++|+. | ++|+.++
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam-~Na~~~~~~lk~~~~a~~~vt~~~ 243 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV-PGPNGPNVSLKPGDPGSFLLTPAP 243 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe-CCCCCCccccCccCCCcEEEcCCC
Confidence 58876666543 4 67899999999999999999999999 8987 468876 4 5888654
No 51
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.26 E-value=5.3e-11 Score=124.19 Aligned_cols=178 Identities=19% Similarity=0.176 Sum_probs=107.9
Q ss_pred CcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEecCC-----------
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGK----------- 667 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~~~~----------- 667 (826)
|.+++.- .+.+.+.++++|++|+++|++++++|||+...+..+++++|+..+ ..+|.++...+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~ 88 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERL 88 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccc
Confidence 4555531 345778899999999999999999999999999999999998654 223444432111
Q ss_pred -----------CHHHHHHHHHHHHHHcc----c----------------------ccCCCCceEEE-E-cChhHHHHHHH
Q 003364 668 -----------TEDEVCRSLERVLLTMR----I----------------------TTSEPKDVAFV-V-DGWALEIALKH 708 (826)
Q Consensus 668 -----------~~~~~~~~~~~~~~~~~----~----------------------~~~~~~~~~l~-~-~g~~~~~~~~~ 708 (826)
..+.....+........ . .........++ . +....+.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (273)
T PRK00192 89 KGDYWVIELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEA 168 (273)
T ss_pred cCCceEEEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHH
Confidence 11111111111111000 0 00000011111 1 12222222222
Q ss_pred HHHHHhhhccccceeEEEEeCcc-cHHHHHHHhh----cCC-CeEEEEcCCcccHHhHHhCCccEEecCCchHHHH----
Q 003364 709 YRKAFTELAILSRTAICCRVTPS-QKAQLVELLK----SCD-YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA---- 778 (826)
Q Consensus 709 ~~~~~~~~~~~~~~~i~~~~~p~-~K~~iv~~l~----~~~-~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~---- 778 (826)
+. .+ .+.... ...+.++.|. +|+..++.+. ... +.|++|||+.||++|++.||+|+|| +|+.+++|
T Consensus 169 l~-~~-~~~~~~-~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam-~NA~~~~k~~~~ 244 (273)
T PRK00192 169 LK-RL-GLKVTR-GGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVV-PGPDGPNPPLLP 244 (273)
T ss_pred HH-Hc-CCEEEE-CCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEe-CCCCCCCcccCc
Confidence 21 11 122222 2356677776 6887776665 357 9999999999999999999999999 99999999
Q ss_pred hhc-cccc
Q 003364 779 RAA-DYSI 785 (826)
Q Consensus 779 ~~A-d~v~ 785 (826)
.+| +.++
T Consensus 245 ~~a~~~v~ 252 (273)
T PRK00192 245 GIADGEFI 252 (273)
T ss_pred cccCCceE
Confidence 666 6777
No 52
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.23 E-value=1e-10 Score=120.30 Aligned_cols=171 Identities=17% Similarity=0.226 Sum_probs=107.3
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC----CCCcEEEecCCCH-HHHH-H---------H
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE----PKGQLLSIDGKTE-DEVC-R---------S 675 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~----~~~~~~~~~~~~~-~~~~-~---------~ 675 (826)
..++.|.+.+++++++++|+.++++|||+...+..+.+++++..+. .+|..+...+... +... . .
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 4567899999999999999999999999999999999999976552 2444444333111 1110 0 0
Q ss_pred HHHHHHHccc---c---cCCCCceEEEEcChhHHHHHHHHHHHHhh----hccccceeEEEEeCcc--cHHHHHHHhhc-
Q 003364 676 LERVLLTMRI---T---TSEPKDVAFVVDGWALEIALKHYRKAFTE----LAILSRTAICCRVTPS--QKAQLVELLKS- 742 (826)
Q Consensus 676 ~~~~~~~~~~---~---~~~~~~~~l~~~g~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~p~--~K~~iv~~l~~- 742 (826)
+......+.. . .....+..+.............+.+.+.. ...+.....+.++.|. +|+..++.+.+
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 1111111111 0 01112333333333322233333333322 1122223346688875 69988887755
Q ss_pred ---CCCeEEEEcCCcccHHhHHh-CCccEEecCCchHHHHhhcc
Q 003364 743 ---CDYRTLAIGDGGNDVRMIQK-ADIGVGISGREGLQAARAAD 782 (826)
Q Consensus 743 ---~~~~v~~iGDg~ND~~ml~~-A~vgIam~gn~~~~~~~~Ad 782 (826)
..+.+++|||+.||++||+. ++.||+| +|+.+++++.++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~-~na~~~~k~~~~ 221 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIV-SNAQEELLQWYD 221 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEE-CCCHHHHHHHHH
Confidence 36789999999999999998 6799999 999999997543
No 53
>PLN02382 probable sucrose-phosphatase
Probab=99.16 E-value=4.2e-10 Score=122.95 Aligned_cols=168 Identities=19% Similarity=0.196 Sum_probs=106.4
Q ss_pred ccCCchHHHH-HHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC----CCCcEEEecCCCH-HHHH-HHH---------
Q 003364 613 RLQDGVPETI-ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE----PKGQLLSIDGKTE-DEVC-RSL--------- 676 (826)
Q Consensus 613 ~l~~~~~~aI-~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~----~~~~~~~~~~~~~-~~~~-~~~--------- 676 (826)
.+.+...+++ ++++++|+.++++|||++..+..+.++.++..|. .+|..+...+... +... ..+
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 3444455666 8899999999999999999999999999987773 2444443322111 1111 111
Q ss_pred HHHHHHccc------ccCCCCceEEEEcChhHHHHHHHHHHHHhh----hccccceeEEEEeCcc--cHHHHHHHhhcC-
Q 003364 677 ERVLLTMRI------TTSEPKDVAFVVDGWALEIALKHYRKAFTE----LAILSRTAICCRVTPS--QKAQLVELLKSC- 743 (826)
Q Consensus 677 ~~~~~~~~~------~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~p~--~K~~iv~~l~~~- 743 (826)
.+....+.. ..+...+..+.........+.+.+.+.+.. +........+.++.|. +|+..++.|.+.
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 111111100 001122333444443444444555555532 2222334467899987 599888777543
Q ss_pred ------CCeEEEEcCCcccHHhHHhCC-ccEEecCCchHHHHhhc
Q 003364 744 ------DYRTLAIGDGGNDVRMIQKAD-IGVGISGREGLQAARAA 781 (826)
Q Consensus 744 ------~~~v~~iGDg~ND~~ml~~A~-vgIam~gn~~~~~~~~A 781 (826)
.+++++|||+.||++||+.|| .|||| +|+.+++|+.+
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam-~NA~~elk~~a 231 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV-SNAQEELLQWY 231 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE-cCCcHHHHHHH
Confidence 568999999999999999999 79999 99999999843
No 54
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.15 E-value=4e-10 Score=115.09 Aligned_cols=167 Identities=18% Similarity=0.231 Sum_probs=99.4
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC----CCCCcEEEecC-CCHHHHH-H---------HHHHHHHHcc
Q 003364 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----EPKGQLLSIDG-KTEDEVC-R---------SLERVLLTMR 684 (826)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~----~~~~~~~~~~~-~~~~~~~-~---------~~~~~~~~~~ 684 (826)
++++ ++++|++++++|||+...+..+...+++..+ ..+|..+.... ....... . .+......+.
T Consensus 22 ~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (236)
T TIGR02471 22 ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALADIP 100 (236)
T ss_pred HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHhcCC
Confidence 6666 6999999999999999999999999987533 22333332211 0001100 0 0111111111
Q ss_pred ---cccCC---CCceEEEEcChh---HHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcC----CCeEEE
Q 003364 685 ---ITTSE---PKDVAFVVDGWA---LEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLA 749 (826)
Q Consensus 685 ---~~~~~---~~~~~l~~~g~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~----~~~v~~ 749 (826)
..... ..+..+...... .+.+.+.+...............+.++.|. +|+..++.+.+. .+.+++
T Consensus 101 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~ 180 (236)
T TIGR02471 101 GLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILV 180 (236)
T ss_pred CcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEE
Confidence 11111 122333333321 222222222211111111122234578876 699888887653 457999
Q ss_pred EcCCcccHHhHHhCCccEEecCCchHHHHhhcc----ccccch
Q 003364 750 IGDGGNDVRMIQKADIGVGISGREGLQAARAAD----YSIGKF 788 (826)
Q Consensus 750 iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad----~v~~~~ 788 (826)
|||+.||++||+.+++||+| +|+.+++|+.|+ +|+.++
T Consensus 181 ~GD~~nD~~ml~~~~~~iav-~na~~~~k~~a~~~~~~v~~~~ 222 (236)
T TIGR02471 181 AGDSGNDEEMLRGLTLGVVV-GNHDPELEGLRHQQRIYFANNP 222 (236)
T ss_pred EcCCccHHHHHcCCCcEEEE-cCCcHHHHHhhcCCcEEEcCCC
Confidence 99999999999999999999 999999999999 777653
No 55
>PTZ00174 phosphomannomutase; Provisional
Probab=99.11 E-value=7.7e-10 Score=113.38 Aligned_cols=172 Identities=16% Similarity=0.193 Sum_probs=100.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC--CC--CCCCcEEEecCCCHH-----------HHHHHHH
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI--SP--EPKGQLLSIDGKTED-----------EVCRSLE 677 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~--~~--~~~~~~~~~~~~~~~-----------~~~~~~~ 677 (826)
++.+.++++|++++++|++++++|||++..+.......+.. .+ ..+|.++..++.... .....++
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~~~i~~~~i~~~l~~~~~~~i~~ 101 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDGELFHSQSILKFLGEEKLKKFIN 101 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECCeEEEEEcchhcCCHHHHHHHHH
Confidence 58999999999999999999999999999877665433211 11 233444433332221 1111111
Q ss_pred HHHH---HcccccCCCC-------ceEE--EE--------------c--ChhHHHHHHHHHHHHhhhccccc--eeEEEE
Q 003364 678 RVLL---TMRITTSEPK-------DVAF--VV--------------D--GWALEIALKHYRKAFTELAILSR--TAICCR 727 (826)
Q Consensus 678 ~~~~---~~~~~~~~~~-------~~~l--~~--------------~--g~~~~~~~~~~~~~~~~~~~~~~--~~i~~~ 727 (826)
.... .......... ...+ .. . ........+.+.+.+..+....+ ...+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~le 181 (247)
T PTZ00174 102 FCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFD 181 (247)
T ss_pred HHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEE
Confidence 1111 1111100000 0000 00 0 01111222223333332222222 235789
Q ss_pred eCcc--cHHHHHHHhhcCCCeEEEEcC----CcccHHhHHhC-CccEEecCCchHHHHhhccccc
Q 003364 728 VTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQKA-DIGVGISGREGLQAARAADYSI 785 (826)
Q Consensus 728 ~~p~--~K~~iv~~l~~~~~~v~~iGD----g~ND~~ml~~A-~vgIam~gn~~~~~~~~Ad~v~ 785 (826)
++|. +|+..++.|.+..++|++||| |.||++||+.| -.|+++ +|+.+.+|..|.++.
T Consensus 182 I~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v-~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 182 VFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSV-KNPEDTIKILKELFL 245 (247)
T ss_pred eeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEe-CCHHHHHHHHHHHhc
Confidence 9997 699999999888899999999 99999999976 467777 688888888776543
No 56
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.09 E-value=3.2e-10 Score=107.35 Aligned_cols=98 Identities=19% Similarity=0.251 Sum_probs=81.2
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcC
Q 003364 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (826)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 699 (826)
.+|+.|+++|+++.++|+.+...+...++.+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999821
Q ss_pred hhHHHHHHHHHHHHhhhccccceeEEEEeCc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHH
Q 003364 700 WALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA 777 (826)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~ 777 (826)
.|....| ..-..+++.++...+++++|||+.||++|++.||+++|| +|+.+++
T Consensus 76 ------------------------~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am-~nA~~~l 130 (169)
T TIGR02726 76 ------------------------FHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV-GDAVADV 130 (169)
T ss_pred ------------------------EEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC-cCchHHH
Confidence 1111122 233456666666678999999999999999999999999 9999999
Q ss_pred Hhhccccccc
Q 003364 778 ARAADYSIGK 787 (826)
Q Consensus 778 ~~~Ad~v~~~ 787 (826)
+..|++|+..
T Consensus 131 k~~A~~I~~~ 140 (169)
T TIGR02726 131 KEAAAYVTTA 140 (169)
T ss_pred HHhCCEEcCC
Confidence 9999999853
No 57
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.04 E-value=3.5e-09 Score=107.01 Aligned_cols=153 Identities=19% Similarity=0.225 Sum_probs=89.8
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC-CC--CCCCcEEEe-cC-------------CCHHHHHHHH
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI-SP--EPKGQLLSI-DG-------------KTEDEVCRSL 676 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~-~~--~~~~~~~~~-~~-------------~~~~~~~~~~ 676 (826)
..+.++++|++|+++|++++++|||+...+..+++.+|+. .+ ..+|..+.. .+ ...+.....+
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 96 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWREEPGYPRIILGISYGIIRLVL 96 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccccCCCceEEecCCCHHHHHHHH
Confidence 4445999999999999999999999999999999999985 22 223433322 11 1111122222
Q ss_pred HHHHHHccc--------------------------ccCCCCceEEEE--cChhHHHHHHHHHHHHhhhccccceeEEEEe
Q 003364 677 ERVLLTMRI--------------------------TTSEPKDVAFVV--DGWALEIALKHYRKAFTELAILSRTAICCRV 728 (826)
Q Consensus 677 ~~~~~~~~~--------------------------~~~~~~~~~l~~--~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 728 (826)
+...+.... .........+.. +....+.+.+.+ +.. .+.... ...+.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~-~~~~~~-~~~~~ei 173 (221)
T TIGR02463 97 ETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRFTALL-ADL-GLAIVQ-GNRFSHV 173 (221)
T ss_pred HHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHHHHHH-HHc-CCeEEe-cCCeeEE
Confidence 211111000 000011112222 122223222222 211 222222 2456788
Q ss_pred Ccc--cHHHHHHHhh----cCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 729 TPS--QKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 729 ~p~--~K~~iv~~l~----~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.|. +|+..++.+. ...++|++|||+.||++||+.||+|||+
T Consensus 174 ~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 174 LGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred ecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 887 5887666554 4578899999999999999999999997
No 58
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.01 E-value=5.3e-09 Score=116.94 Aligned_cols=157 Identities=15% Similarity=0.180 Sum_probs=95.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEe----------------------cCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI----------------------DGKT 668 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~----------------------~~~~ 668 (826)
.+.+.++++|++|+++|+.++++|||+...+..+++++|+..+ ..+|..+.. .+..
T Consensus 433 ~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~ 512 (694)
T PRK14502 433 YSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMA 512 (694)
T ss_pred ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCCcccccccccccCCCeEEEEcCCC
Confidence 3556889999999999999999999999999999999997432 222333322 2222
Q ss_pred HHHHHHHHHHHHHHcc-------------ccc--C----------------------CCCceEEEEcCh--hHHHHHHHH
Q 003364 669 EDEVCRSLERVLLTMR-------------ITT--S----------------------EPKDVAFVVDGW--ALEIALKHY 709 (826)
Q Consensus 669 ~~~~~~~~~~~~~~~~-------------~~~--~----------------------~~~~~~l~~~g~--~~~~~~~~~ 709 (826)
.+.+...++...+... ... . ......+...++ .++.+.+.+
T Consensus 513 ~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~a~~Re~seKIl~~gd~e~Leel~~~L 592 (694)
T PRK14502 513 YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAELAKQREYSETVHIEGDKRSTNIVLNHI 592 (694)
T ss_pred HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHHHhhccCceeEEEcCCHHHHHHHHHHH
Confidence 3333333332222110 000 0 001112222222 222222222
Q ss_pred HHHHhhhccccceeEEEEeCcc-cHHHHHHHhhcC----CCeEEEE--cCCcccHHhHHhCCccEEecCC
Q 003364 710 RKAFTELAILSRTAICCRVTPS-QKAQLVELLKSC----DYRTLAI--GDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 710 ~~~~~~~~~~~~~~i~~~~~p~-~K~~iv~~l~~~----~~~v~~i--GDg~ND~~ml~~A~vgIam~gn 772 (826)
.++ .+.... ...|.++.+. +|+..++.|.+. .+.+++| |||.||++||+.||+||||.+.
T Consensus 593 ~~~--~l~v~~-g~rfleI~~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 593 QQS--GLEYSF-GGRFYEVTGGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred HHc--CcEEEE-CCEEEEeCCCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 222 223222 5667788854 799888888663 4567777 9999999999999999999443
No 59
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.00 E-value=1.1e-09 Score=115.26 Aligned_cols=127 Identities=24% Similarity=0.260 Sum_probs=91.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|++.|++++++||.....+..+.+++|+...-.+ .+.+.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an--~lei~--------------------------- 231 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVAN--ELEIM--------------------------- 231 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEe--EEEEE---------------------------
Confidence 5789999999999999999999999998888888888887321100 00000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE-eCcccHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
+|. + ...+..+ +..+.|...++.+.+ ..+++++||||.||++|++.||+||
T Consensus 232 -----dg~------------------l-tg~v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgi 287 (322)
T PRK11133 232 -----DGK------------------L-TGNVLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGI 287 (322)
T ss_pred -----CCE------------------E-EeEecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeE
Confidence 000 0 0000101 233568876666654 3578999999999999999999999
Q ss_pred EecCCchHHHHhhccccccchhcchhhe
Q 003364 768 GISGREGLQAARAADYSIGKFRFLKRLI 795 (826)
Q Consensus 768 am~gn~~~~~~~~Ad~v~~~~~~l~~l~ 795 (826)
|| |+.+.+++.||+++.. ..|..++
T Consensus 288 A~--nAkp~Vk~~Ad~~i~~-~~l~~~l 312 (322)
T PRK11133 288 AY--HAKPKVNEQAQVTIRH-ADLMGVL 312 (322)
T ss_pred Ee--CCCHHHHhhCCEEecC-cCHHHHH
Confidence 99 7889999999999974 5554443
No 60
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.98 E-value=1.2e-08 Score=102.62 Aligned_cols=156 Identities=16% Similarity=0.180 Sum_probs=89.5
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC--CCCCcEEEe----------------------cC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI----------------------DG 666 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~--~~~~~~~~~----------------------~~ 666 (826)
.+...++++++|++|+++|++++++|||+...+..+++++|+..+ ..+|..+.. .+
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~i~~~~ 92 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPFPVGAGREVGNYEVIELG 92 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccccccccccCCCeEEEEcC
Confidence 455677899999999999999999999999999999999997543 223333322 22
Q ss_pred CCHHHHHHHHHHHHHHcccc--cC-----------------------CCCceEEEEcChhHHHHHHHHHHHHhhhccccc
Q 003364 667 KTEDEVCRSLERVLLTMRIT--TS-----------------------EPKDVAFVVDGWALEIALKHYRKAFTELAILSR 721 (826)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~--~~-----------------------~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 721 (826)
...+.+...++...+..... .. ...+..+..+...+..+.+.+.. ..+.....
T Consensus 93 l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~e~~~~~~~~~~~--~~~~~~~s 170 (225)
T TIGR02461 93 KPVAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWSREGWEAILVTARA--RGLKYTHG 170 (225)
T ss_pred CCHHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCCHHHHHHHHHHHHH--cCCcEEEC
Confidence 22333332222221100000 00 00000011111112222222211 11222222
Q ss_pred eeEEEEeCcc-cHHHHHHHhhc------CCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 722 TAICCRVTPS-QKAQLVELLKS------CDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 722 ~~i~~~~~p~-~K~~iv~~l~~------~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.. +..+.+. +|+..++.+.. ....+++|||+.||++||+.||+||++
T Consensus 171 ~~-~~~i~~~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 171 GR-FYTVHGGSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred CE-EEEECCCCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 33 3456543 69887777754 234799999999999999999999987
No 61
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.97 E-value=2.2e-09 Score=101.02 Aligned_cols=96 Identities=21% Similarity=0.184 Sum_probs=77.2
Q ss_pred HHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcCh
Q 003364 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (826)
Q Consensus 621 aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 700 (826)
+|++|+++|+++.++||++...+..+++.+|+...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------------------- 70 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------------------- 70 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE---------------------------------------------
Confidence 89999999999999999999999999999997210
Q ss_pred hHHHHHHHHHHHHhhhccccceeEEEEeCcccHH----HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHH
Q 003364 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKA----QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (826)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~----~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~ 776 (826)
+.. ...|. ++++.++...+.++++||+.||++|++.|+++++| .++.+.
T Consensus 71 ------------------------~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v-~~~~~~ 123 (154)
T TIGR01670 71 ------------------------YQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAV-ADAHPL 123 (154)
T ss_pred ------------------------Eec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEec-CCcCHH
Confidence 100 12233 34444444568899999999999999999999999 788788
Q ss_pred HHhhccccccch
Q 003364 777 AARAADYSIGKF 788 (826)
Q Consensus 777 ~~~~Ad~v~~~~ 788 (826)
++..|++++.+.
T Consensus 124 ~~~~a~~i~~~~ 135 (154)
T TIGR01670 124 LIPRADYVTRIA 135 (154)
T ss_pred HHHhCCEEecCC
Confidence 888999999654
No 62
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.96 E-value=4.3e-09 Score=108.64 Aligned_cols=175 Identities=18% Similarity=0.207 Sum_probs=102.5
Q ss_pred ccCCchHHHHHHHHH-cCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEE-ecCCC-----HHHHHHHHHHHHHH-cc
Q 003364 613 RLQDGVPETIETLRK-AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDGKT-----EDEVCRSLERVLLT-MR 684 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~-~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~-~~ 684 (826)
.+.+.++++|++|++ .|+.++++|||+...+..++..+++.-...+|..+. .++.. ..+....+...... ..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 577899999999998 899999999999999998887776432223333322 11110 01111111111111 10
Q ss_pred ---cccCCCCceEEEEcCh---hHHHHHH----HHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcC----CCeEE
Q 003364 685 ---ITTSEPKDVAFVVDGW---ALEIALK----HYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTL 748 (826)
Q Consensus 685 ---~~~~~~~~~~l~~~g~---~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~----~~~v~ 748 (826)
-..-+.+...+..... ....... .+.+.+.. ..+.....+.++.|. +|+..++.+.+. .+.++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~-~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~ 194 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQ-LALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPV 194 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCc-eEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEE
Confidence 0000112222222221 1111122 22222221 222345567788887 799888876553 56899
Q ss_pred EEcCCcccHHhHHhC----CccEEecCCchHHHHhhccccccchhcchh
Q 003364 749 AIGDGGNDVRMIQKA----DIGVGISGREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 749 ~iGDg~ND~~ml~~A----~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
+|||+.||.+||+.+ ++||+| ||+.+ .|++.+.+-.++..
T Consensus 195 ~~GD~~nD~~mf~~~~~~~g~~vav-g~a~~----~A~~~l~~~~~v~~ 238 (266)
T PRK10187 195 FVGDDLTDEAGFAVVNRLGGISVKV-GTGAT----QASWRLAGVPDVWS 238 (266)
T ss_pred EEcCCccHHHHHHHHHhcCCeEEEE-CCCCC----cCeEeCCCHHHHHH
Confidence 999999999999999 999999 88753 46777766554443
No 63
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.92 E-value=6.3e-09 Score=102.40 Aligned_cols=124 Identities=23% Similarity=0.190 Sum_probs=88.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.|+.+++.| +++++||-....+.++++++|+...-.+. +..++.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~--l~~~~~------------------------- 119 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHK--LEIDDS------------------------- 119 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhcee--eEEecC-------------------------
Confidence 47899999999999975 99999999999999999999984321110 000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn 772 (826)
|. +. ... ...+..|...++.++..+..++++|||.||++|++.||+||++ +
T Consensus 120 ------g~------------------~t-G~~--~~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~--~ 170 (203)
T TIGR02137 120 ------DR------------------VV-GYQ--LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF--H 170 (203)
T ss_pred ------Ce------------------eE-Cee--ecCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEe--c
Confidence 00 00 000 1245679999999987777899999999999999999999999 4
Q ss_pred chHHHHhhccccc--cchhcchh
Q 003364 773 EGLQAARAADYSI--GKFRFLKR 793 (826)
Q Consensus 773 ~~~~~~~~Ad~v~--~~~~~l~~ 793 (826)
+.+.+++.||=.. .++..|..
T Consensus 171 ak~~~~~~~~~~~~~~~~~~~~~ 193 (203)
T TIGR02137 171 APENVIREFPQFPAVHTYEDLKR 193 (203)
T ss_pred CCHHHHHhCCCCCcccCHHHHHH
Confidence 5566777665432 44444443
No 64
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.91 E-value=5.3e-09 Score=103.35 Aligned_cols=120 Identities=23% Similarity=0.243 Sum_probs=89.0
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEe-cCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI-DGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
.+++|++.+.++.++++|++++++||-...-+.++++.+|+...-.+ .+.. +| .
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an--~l~~~dG-~---------------------- 130 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN--ELEIDDG-K---------------------- 130 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheee--EEEEeCC-E----------------------
Confidence 67999999999999999999999999999999999999998654322 1100 00 0
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeC-cccHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCc
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT-PSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~v 765 (826)
-...+...+. .+.|...++.+.. ..+.++++|||.||.|||+.||.
T Consensus 131 -----------------------------ltG~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~ 181 (212)
T COG0560 131 -----------------------------LTGRVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGL 181 (212)
T ss_pred -----------------------------EeceeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCC
Confidence 0122333333 3568876655544 34679999999999999999999
Q ss_pred cEEecCCchHHHHhhccccccc
Q 003364 766 GVGISGREGLQAARAADYSIGK 787 (826)
Q Consensus 766 gIam~gn~~~~~~~~Ad~v~~~ 787 (826)
+|+. |+.+.+.+.|+.....
T Consensus 182 ~ia~--n~~~~l~~~a~~~~~~ 201 (212)
T COG0560 182 PIAV--NPKPKLRALADVRIWP 201 (212)
T ss_pred CeEe--CcCHHHHHHHHHhcCh
Confidence 9999 5566677777766544
No 65
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.83 E-value=5.2e-09 Score=92.89 Aligned_cols=95 Identities=21% Similarity=0.213 Sum_probs=79.2
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcC
Q 003364 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (826)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 699 (826)
..|+.+.+.|+++.++|||....+..-|+++||..
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 47999999999999999999999999999999821
Q ss_pred hhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHH----hhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchH
Q 003364 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVEL----LKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (826)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~----l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (826)
+|. -..+|...++. ++...++|+++||..||.|+|+.+|+++|. .++++
T Consensus 77 ------------------------~~q--G~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~-~dAh~ 129 (170)
T COG1778 77 ------------------------LYQ--GISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV-ADAHP 129 (170)
T ss_pred ------------------------eee--chHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc-cccCH
Confidence 111 12356554444 444578999999999999999999999999 99999
Q ss_pred HHHhhcccccc
Q 003364 776 QAARAADYSIG 786 (826)
Q Consensus 776 ~~~~~Ad~v~~ 786 (826)
.+++.||||+.
T Consensus 130 ~v~~~a~~Vt~ 140 (170)
T COG1778 130 LLKQRADYVTS 140 (170)
T ss_pred HHHHhhHhhhh
Confidence 99999999994
No 66
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.83 E-value=9.2e-09 Score=99.95 Aligned_cols=110 Identities=23% Similarity=0.232 Sum_probs=83.1
Q ss_pred HHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEEcC
Q 003364 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (826)
Q Consensus 620 ~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 699 (826)
.+|+.|+++|+++.++||++...+..+++++|+...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-------------------------------------------- 90 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-------------------------------------------- 90 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------------------------------------------
Confidence 699999999999999999999999999999997211
Q ss_pred hhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHH----HHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchH
Q 003364 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (826)
Q Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~----iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~ 775 (826)
|. ....|.. +++.++..++++++|||+.||++|++.||+++++ +++.+
T Consensus 91 -------------------------f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v-~~~~~ 142 (183)
T PRK09484 91 -------------------------YQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAV-ADAHP 142 (183)
T ss_pred -------------------------ec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEec-CChhH
Confidence 10 1123443 3444444567899999999999999999999998 77777
Q ss_pred HHHhhcccccc------chhcchhhee-ecchh
Q 003364 776 QAARAADYSIG------KFRFLKRLIL-VHGRY 801 (826)
Q Consensus 776 ~~~~~Ad~v~~------~~~~l~~l~l-~~gr~ 801 (826)
..+..||+++. ....+..+++ ..|++
T Consensus 143 ~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~ 175 (183)
T PRK09484 143 LLLPRADYVTRIAGGRGAVREVCDLLLLAQGKL 175 (183)
T ss_pred HHHHhCCEEecCCCCCCHHHHHHHHHHHhcCCh
Confidence 77779999995 3455555443 23554
No 67
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.82 E-value=2.6e-07 Score=99.54 Aligned_cols=230 Identities=16% Similarity=0.192 Sum_probs=134.7
Q ss_pred HHhccCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCC-------C-cEEEecCC
Q 003364 596 QRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK-------G-QLLSIDGK 667 (826)
Q Consensus 596 ~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~-------~-~~~~~~~~ 667 (826)
...-.+..|.|++....+.+++....|+.|.++.|+++..|-.+.....-+|.++||...=.- + .-..--+.
T Consensus 809 ~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~p 888 (1354)
T KOG4383|consen 809 DQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGP 888 (1354)
T ss_pred HHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCC
Confidence 344467899999999999999999999999999999999999999999999999998643100 0 00000000
Q ss_pred CHHHHHH---HHHHHHHHcccccCCCC----------ceEEE-EcCh-----------hHHHHHHHHHHHHhhhccccc-
Q 003364 668 TEDEVCR---SLERVLLTMRITTSEPK----------DVAFV-VDGW-----------ALEIALKHYRKAFTELAILSR- 721 (826)
Q Consensus 668 ~~~~~~~---~~~~~~~~~~~~~~~~~----------~~~l~-~~g~-----------~~~~~~~~~~~~~~~~~~~~~- 721 (826)
..+.... .+.+....+...+.+.. ...+. ++.+ .+..-.+..+.|++++..+.-
T Consensus 889 a~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLL 968 (1354)
T KOG4383|consen 889 AHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLL 968 (1354)
T ss_pred CChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCccee
Confidence 0000000 11111111111110000 00000 0000 000011122333333332222
Q ss_pred eeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccH--HhHHhCCccEEecCCchH--------------HHHhhcc---
Q 003364 722 TAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDV--RMIQKADIGVGISGREGL--------------QAARAAD--- 782 (826)
Q Consensus 722 ~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~--~ml~~A~vgIam~gn~~~--------------~~~~~Ad--- 782 (826)
...|.+.+|+.--+.++.++++|+.|++.|...|-- -.+-.||++||+ ..-.+ ..+++.|
T Consensus 969 V~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISial-D~l~~~~C~~e~fg~assismaqandgls 1047 (1354)
T KOG4383|consen 969 VGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIAL-DDLEEPACRLEDFGVASSISMAQANDGLS 1047 (1354)
T ss_pred eeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEe-ccCCCccceecccccchhhhhhhhcCCCC
Confidence 457888899999999999999999999999988843 345678999987 22111 0111223
Q ss_pred --------------ccccchhcchhheeec-chhhHHHHHHHHHHHhhhhHHHHHhhhC
Q 003364 783 --------------YSIGKFRFLKRLILVH-GRYSYNRTAFLSQYSFYKSLLICFIQIL 826 (826)
Q Consensus 783 --------------~v~~~~~~l~~l~l~~-gr~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (826)
+..+.-+.++.+-|++ .|...--+++.+.|.++..+++..++|+
T Consensus 1048 plQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~fl 1106 (1354)
T KOG4383|consen 1048 PLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFL 1106 (1354)
T ss_pred ceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 1112212333322444 7777778899999999999998888764
No 68
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.76 E-value=2e-08 Score=100.16 Aligned_cols=157 Identities=22% Similarity=0.249 Sum_probs=89.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCH--------HHHHHHHHHHHHHcc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE--------DEVCRSLERVLLTMR 684 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 684 (826)
++.+.+.++|++|+++|++++++|||+...+..+++.++..--..+|..+...+... .+.....+.....+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 588999999999999999999999999999999988754221233444443322211 111100011111111
Q ss_pred ccc---------CCCCceEEEEcCh-hHHHHHHHHHHHH-------hhhccccceeEEEEeCcc--cHHHHHHHhhc---
Q 003364 685 ITT---------SEPKDVAFVVDGW-ALEIALKHYRKAF-------TELAILSRTAICCRVTPS--QKAQLVELLKS--- 742 (826)
Q Consensus 685 ~~~---------~~~~~~~l~~~g~-~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~--- 742 (826)
... .......+...+. ............. ..+........+.++.|. +|+..++.+.+
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 000 0111111111111 0011111111111 112222234456788885 69988877754
Q ss_pred -CCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 743 -CDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 743 -~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
..+.++++||+.||.+|++.+++||||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 346799999999999999999999998
No 69
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.71 E-value=3.4e-07 Score=92.36 Aligned_cols=45 Identities=9% Similarity=0.117 Sum_probs=40.5
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~ 655 (826)
.+.+.+.++++|++|+++||.++++|||+...+..+.+++++..+
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 345778899999999999999999999999999999999998654
No 70
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.57 E-value=2.7e-07 Score=93.13 Aligned_cols=120 Identities=24% Similarity=0.338 Sum_probs=83.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.|+.|+++|++++++||.....+..+++.+|+.....+ .+..++..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~--~~~~~~~~------------------------ 138 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFAN--RLEVEDGK------------------------ 138 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEee--EEEEECCE------------------------
Confidence 5889999999999999999999999999999999999998432110 00000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE-eCcccHHHHHHHhh----cCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~p~~K~~iv~~l~----~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
+ ...+... ..+..|..+++.+. ...++++++||+.+|++|++.||+++
T Consensus 139 --------------------------~-~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 139 --------------------------L-TGLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred --------------------------E-EEEecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 0 0000001 11233665555443 34568999999999999999999999
Q ss_pred EecCCchHHHHhhccccccc
Q 003364 768 GISGREGLQAARAADYSIGK 787 (826)
Q Consensus 768 am~gn~~~~~~~~Ad~v~~~ 787 (826)
++ + +.+.++..||+++.+
T Consensus 192 ~~-~-~~~~~~~~a~~~i~~ 209 (219)
T TIGR00338 192 AF-N-AKPKLQQKADICINK 209 (219)
T ss_pred Ee-C-CCHHHHHhchhccCC
Confidence 99 3 345677799999864
No 71
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.53 E-value=1.2e-06 Score=104.18 Aligned_cols=189 Identities=17% Similarity=0.137 Sum_probs=106.7
Q ss_pred cCcEEEEEEee--ccccCCchHHHHHHHHH-cCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCH-------
Q 003364 600 HDLKVLGVTAI--EDRLQDGVPETIETLRK-AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE------- 669 (826)
Q Consensus 600 ~~l~~lG~i~~--~d~l~~~~~~aI~~l~~-~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~------- 669 (826)
-|.+++....- ...+.+++.++|++|.+ .|+.|+++|||+...........++.--..+|..+...+...
T Consensus 499 ~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~ 578 (726)
T PRK14501 499 YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVA 578 (726)
T ss_pred cCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcc
Confidence 35555543211 12467899999999999 699999999999999988776655422233344443222110
Q ss_pred HHHHHHHHHHHHHcccc----cCCCCceEEEEc--C--hhHH-HHHHHHHHHHhhh-----ccccceeEEEEeCcc--cH
Q 003364 670 DEVCRSLERVLLTMRIT----TSEPKDVAFVVD--G--WALE-IALKHYRKAFTEL-----AILSRTAICCRVTPS--QK 733 (826)
Q Consensus 670 ~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~--g--~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~~~p~--~K 733 (826)
......+.......... .-+.+...+... . ..+. ...++..+.+... ..+.....+.++.|. +|
T Consensus 579 ~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnK 658 (726)
T PRK14501 579 TEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNK 658 (726)
T ss_pred hhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCH
Confidence 00111222222211110 001112223221 1 1111 1111222222111 111224456688886 79
Q ss_pred HHHHHHhhcC--CCeEEEEcCCcccHHhHHhC---CccEEecCCchHHHHhhccccccchhcchh
Q 003364 734 AQLVELLKSC--DYRTLAIGDGGNDVRMIQKA---DIGVGISGREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 734 ~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A---~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
+..++.+.+. .+.++++||+.||.+||+.+ +++|+| ||+ +..|++.+++.+....
T Consensus 659 G~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~v-G~~----~s~A~~~l~~~~eV~~ 718 (726)
T PRK14501 659 GRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKV-GPG----ESRARYRLPSQREVRE 718 (726)
T ss_pred HHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEE-CCC----CCcceEeCCCHHHHHH
Confidence 9999888763 56899999999999999996 688999 774 3578898887655433
No 72
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.47 E-value=3.4e-07 Score=84.32 Aligned_cols=123 Identities=20% Similarity=0.299 Sum_probs=85.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEe--cCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI--DGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
.+.|++++.++.|++.|.++.++||--...+.+++.++||...+-....+.+ +|+-
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~---------------------- 145 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKY---------------------- 145 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcc----------------------
Confidence 4789999999999999999999999999999999999999543211001100 0100
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE----eCcccHHHHHHHhhcC--CCeEEEEcCCcccHHhHHhCC
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR----VTPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A~ 764 (826)
.-|-. .....|+++++.+++. ...++|+|||.||++|+..|+
T Consensus 146 --------------------------------~gfd~~~ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~ 193 (227)
T KOG1615|consen 146 --------------------------------LGFDTNEPTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPAD 193 (227)
T ss_pred --------------------------------cccccCCccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchh
Confidence 00001 1122599999998873 467999999999999999988
Q ss_pred ccEEecCCc-hHHHHhhccccccchh
Q 003364 765 IGVGISGRE-GLQAARAADYSIGKFR 789 (826)
Q Consensus 765 vgIam~gn~-~~~~~~~Ad~v~~~~~ 789 (826)
.=|+..||- .+++|..|++-+..|.
T Consensus 194 afi~~~g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 194 AFIGFGGNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred hhhccCCceEcHhhHhccHHHHHHHH
Confidence 777775543 2345556666555543
No 73
>PLN02423 phosphomannomutase
Probab=98.45 E-value=2.2e-06 Score=87.47 Aligned_cols=157 Identities=18% Similarity=0.164 Sum_probs=89.9
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc-CCC--C-CCCCCcEEEecCCCH-----------HHHHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC-NFI--S-PEPKGQLLSIDGKTE-----------DEVCRSL 676 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~-gi~--~-~~~~~~~~~~~~~~~-----------~~~~~~~ 676 (826)
.++++.+.++|++|+++ ++++++|||+........... ... . -..+|..+..+++.. +.....+
T Consensus 23 ~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~~i~~~~l~~~l~~~~~~~ii 101 (245)
T PLN02423 23 KEATPEMLEFMKELRKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGKLIGTQSLKSFLGEDKLKEFI 101 (245)
T ss_pred CcCCHHHHHHHHHHHhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCEEEEEecccccCCHHHHHHHH
Confidence 36899999999999987 999999999887775544332 110 0 022333433333322 2222222
Q ss_pred HHHHH---HcccccCC-------CCc-------------------eEEEEcChhHHHHHHHHHHHHhhhcc--ccceeEE
Q 003364 677 ERVLL---TMRITTSE-------PKD-------------------VAFVVDGWALEIALKHYRKAFTELAI--LSRTAIC 725 (826)
Q Consensus 677 ~~~~~---~~~~~~~~-------~~~-------------------~~l~~~g~~~~~~~~~~~~~~~~~~~--~~~~~i~ 725 (826)
+...+ ........ ... ....+ ....+...+.+.+.|..+.. ......+
T Consensus 102 ~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i-~~~~~~~~~~l~~~~~~~~~~~s~~g~~~ 180 (245)
T PLN02423 102 NFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKV-HNIRPKMVSVLREKFAHLNLTYSIGGQIS 180 (245)
T ss_pred HHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCcc-chHHHHHHHHHHHhCCCCcEEEecCCcEE
Confidence 21111 01000000 000 00001 11122233334455544333 2233478
Q ss_pred EEeCcc--cHHHHHHHhhcCCCeEEEEcC----CcccHHhHHh-CCccEEecC
Q 003364 726 CRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQK-ADIGVGISG 771 (826)
Q Consensus 726 ~~~~p~--~K~~iv~~l~~~~~~v~~iGD----g~ND~~ml~~-A~vgIam~g 771 (826)
.+++|. +|+..++.|+ ..++|++||| |.||++||+. .-.|+++++
T Consensus 181 iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 181 FDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred EEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 899987 6999999999 8899999999 8999999997 556888843
No 74
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.44 E-value=8.5e-07 Score=88.49 Aligned_cols=124 Identities=23% Similarity=0.233 Sum_probs=87.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++ +++.++||.....+..+.+.+|+...-.+ .+...+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~~------------------------ 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH--SLEVDEDG------------------------ 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc--eEEECCCC------------------------
Confidence 3579999999999999 99999999999999999999998422110 00000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE-eCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~g 771 (826)
...... ..|..|...++.++..++.++++|||.||++|.+.||+|++. +
T Consensus 121 -----------------------------~i~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~-~ 170 (205)
T PRK13582 121 -----------------------------MITGYDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILF-R 170 (205)
T ss_pred -----------------------------eEECccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEE-C
Confidence 000011 135678888888888888999999999999999999999987 4
Q ss_pred CchHHHHhhccc-cccchhcchh
Q 003364 772 REGLQAARAADY-SIGKFRFLKR 793 (826)
Q Consensus 772 n~~~~~~~~Ad~-v~~~~~~l~~ 793 (826)
.........+++ +..++..|..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~el~~ 193 (205)
T PRK13582 171 PPANVIAEFPQFPAVHTYDELLA 193 (205)
T ss_pred CCHHHHHhCCcccccCCHHHHHH
Confidence 433223335565 6666665544
No 75
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.40 E-value=1.2e-06 Score=89.56 Aligned_cols=154 Identities=21% Similarity=0.333 Sum_probs=91.1
Q ss_pred HHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC----CCCcEEEe-cCCCHHHHH-H---------HHHHHHHHc---
Q 003364 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE----PKGQLLSI-DGKTEDEVC-R---------SLERVLLTM--- 683 (826)
Q Consensus 622 I~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~----~~~~~~~~-~~~~~~~~~-~---------~~~~~~~~~--- 683 (826)
++...+.++.++++|||+...+..+.++.++..|+ +.|.-+.. .....+... . .+......+
T Consensus 28 l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l 107 (247)
T PF05116_consen 28 LEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGL 107 (247)
T ss_dssp HHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCE
T ss_pred HHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCc
Confidence 33345788899999999999999999999986652 22333333 111111111 1 111222211
Q ss_pred ccc---cCCCCceEEEEcChhHHHHHHHHHHHHhh----hccccceeEEEEeCcc--cHHHHHHHhhcC----CCeEEEE
Q 003364 684 RIT---TSEPKDVAFVVDGWALEIALKHYRKAFTE----LAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAI 750 (826)
Q Consensus 684 ~~~---~~~~~~~~l~~~g~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~p~--~K~~iv~~l~~~----~~~v~~i 750 (826)
... .....+..+.+...........+.+.+.. ...+.....+.++.|. +|+.++++|+.. .+.|+++
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~a 187 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVA 187 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEE
T ss_pred ccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEE
Confidence 111 12233555556655554444555544432 1122234456788886 699999998874 4689999
Q ss_pred cCCcccHHhHHhCCccEEecCCchHH
Q 003364 751 GDGGNDVRMIQKADIGVGISGREGLQ 776 (826)
Q Consensus 751 GDg~ND~~ml~~A~vgIam~gn~~~~ 776 (826)
||+.||.+||..++.||.+ +|+.++
T Consensus 188 GDSgND~~mL~~~~~~vvV-~Na~~e 212 (247)
T PF05116_consen 188 GDSGNDLEMLEGGDHGVVV-GNAQPE 212 (247)
T ss_dssp ESSGGGHHHHCCSSEEEE--TTS-HH
T ss_pred eCCCCcHHHHcCcCCEEEE-cCCCHH
Confidence 9999999999999999999 998887
No 76
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.38 E-value=1.8e-06 Score=85.81 Aligned_cols=105 Identities=29% Similarity=0.303 Sum_probs=74.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.|+.|+++|+++.++||.....+..+++.+|+...-.. .+..+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~g------------------------ 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSN--ELVFDEKG------------------------ 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEE--EEEEcCCC------------------------
Confidence 5789999999999999999999999999999999999997321100 00000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCccEE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVG 768 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~vgIa 768 (826)
......+....+..|..+++.+.. ..++++++||+.+|++|++.||++++
T Consensus 134 --------------------------~~~p~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a 187 (201)
T TIGR01491 134 --------------------------FIQPDGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISIS 187 (201)
T ss_pred --------------------------eEecceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEE
Confidence 000011112345567666555433 45689999999999999999999999
Q ss_pred e
Q 003364 769 I 769 (826)
Q Consensus 769 m 769 (826)
+
T Consensus 188 ~ 188 (201)
T TIGR01491 188 L 188 (201)
T ss_pred E
Confidence 9
No 77
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.24 E-value=4.6e-06 Score=82.22 Aligned_cols=92 Identities=25% Similarity=0.275 Sum_probs=67.9
Q ss_pred CchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEE
Q 003364 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695 (826)
Q Consensus 616 ~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 695 (826)
+++.+.|+.++++|++++|+||.+...+.++++.+|+.... ++..+. .
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~----v~~~~~-~--------------------------- 139 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN----VIGNEL-F--------------------------- 139 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG----EEEEEE-E---------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE----EEEEee-e---------------------------
Confidence 66669999999999999999999999999999999984321 000000 0
Q ss_pred EEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc-c--HHHHHHHh------hcCCCeEEEEcCCcccHHhHH
Q 003364 696 VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS-Q--KAQLVELL------KSCDYRTLAIGDGGNDVRMIQ 761 (826)
Q Consensus 696 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~-~--K~~iv~~l------~~~~~~v~~iGDg~ND~~ml~ 761 (826)
+ ........++++. + |...++.+ +.....++++|||.||++|||
T Consensus 140 --~--------------------~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 140 --D--------------------NGGGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp --C--------------------TTCCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred --e--------------------cccceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 0 0012234455554 4 99999999 456789999999999999997
No 78
>PLN02954 phosphoserine phosphatase
Probab=98.22 E-value=6.2e-06 Score=83.51 Aligned_cols=128 Identities=21% Similarity=0.321 Sum_probs=82.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|+++.++||.....+..+++.+|+....--...+.....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~------------------------- 138 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS------------------------- 138 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC-------------------------
Confidence 4789999999999999999999999999999999999998421000000000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE-----eCcccHHHHHHHhhcC--CCeEEEEcCCcccHHhHHhCCc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-----VTPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~ml~~A~v 765 (826)
| ...... .....|...++.+... .+++++|||+.||+.|.+.+++
T Consensus 139 ------g----------------------~~~g~~~~~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~ 190 (224)
T PLN02954 139 ------G----------------------EYAGFDENEPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGA 190 (224)
T ss_pred ------C----------------------cEECccCCCcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCC
Confidence 0 000000 1123477777666543 3679999999999999888544
Q ss_pred c--EEecCCc-hHHHHhhccccccchhcchh
Q 003364 766 G--VGISGRE-GLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 766 g--Iam~gn~-~~~~~~~Ad~v~~~~~~l~~ 793 (826)
. ++..+.. .+.....||+++.+.+.|..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~ 221 (224)
T PLN02954 191 DLFIGYGGVQVREAVAAKADWFVTDFQDLIE 221 (224)
T ss_pred CEEEecCCCccCHHHHhcCCEEECCHHHHHH
Confidence 4 4442222 23334468999888776654
No 79
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.14 E-value=1e-05 Score=81.53 Aligned_cols=132 Identities=14% Similarity=0.169 Sum_probs=82.6
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|+++|+++.++||-....+.++.+.+ +... . ++....
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~--~--i~~n~~-------------------------- 122 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKE--Q--IYCNGS-------------------------- 122 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcC--c--EEEeEE--------------------------
Confidence 68999999999999999999999999999999998887 5321 0 110000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEE--E-EeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC--C-RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~--~-~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
..++... ......+.. + ......|..+++.++..++.++++|||.||++|.+.||+.++-
T Consensus 123 ---~~~~~~~--------------~~~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 123 ---DFSGEYI--------------TITWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred ---EecCCee--------------EEeccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 0000000 000000000 0 0011248899999988888999999999999999999996663
Q ss_pred cCCchHHHHh--hccccccchhcchh
Q 003364 770 SGREGLQAAR--AADYSIGKFRFLKR 793 (826)
Q Consensus 770 ~gn~~~~~~~--~Ad~v~~~~~~l~~ 793 (826)
+.-.+.+.+ .+.+...+|+.+..
T Consensus 186 -~~l~~~~~~~~~~~~~~~~f~ei~~ 210 (219)
T PRK09552 186 -DFLITKCEELGIPYTPFETFHDVQT 210 (219)
T ss_pred -HHHHHHHHHcCCCccccCCHHHHHH
Confidence 311111112 35555566655544
No 80
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.12 E-value=1.3e-05 Score=80.36 Aligned_cols=111 Identities=14% Similarity=0.173 Sum_probs=74.1
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-+++|++.+.++.|++.|++++++||.....+.++++.++....-.... ...++...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~-~~~~~~~~---------------------- 125 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNE-ADFSNEYI---------------------- 125 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEece-eEeeCCee----------------------
Confidence 3689999999999999999999999999988888888764321100000 00011000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccc-eeEE-EEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSR-TAIC-CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~-~~i~-~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
... ... .... ..-....|..+++.++..++.++++|||.||++|++.||+.+|=
T Consensus 126 ----~~~--------------------~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar 181 (214)
T TIGR03333 126 ----HID--------------------WPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFAR 181 (214)
T ss_pred ----EEe--------------------CCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEeh
Confidence 000 000 0000 00012369999999887788899999999999999999997764
No 81
>PLN02580 trehalose-phosphatase
Probab=98.12 E-value=5.2e-05 Score=80.83 Aligned_cols=189 Identities=14% Similarity=0.187 Sum_probs=101.1
Q ss_pred CcEEEEEEeecc--ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEE---------------
Q 003364 601 DLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS--------------- 663 (826)
Q Consensus 601 ~l~~lG~i~~~d--~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~--------------- 663 (826)
|.++.-+.---+ .+.++.++++++|.+. ..|+|+|||+...+.....-.++.--...|.-+.
T Consensus 127 DGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~ 205 (384)
T PLN02580 127 DGTLSPIVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCI 205 (384)
T ss_pred CCccCCCCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCCCCccEEEeCCceeecCCCCcccccccccc
Confidence 555554442111 3678999999999988 4899999999998887764433211111111000
Q ss_pred ----ecCCC------HHHHHHHHHHHHHHc-------ccccCCCCceEEEEcC-----hhHHHHHHHHHHH---Hhhhcc
Q 003364 664 ----IDGKT------EDEVCRSLERVLLTM-------RITTSEPKDVAFVVDG-----WALEIALKHYRKA---FTELAI 718 (826)
Q Consensus 664 ----~~~~~------~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~g-----~~~~~~~~~~~~~---~~~~~~ 718 (826)
..+.. ..+....+..+...+ .-..-+.+.+++.+.- .......+..... ++.+..
T Consensus 206 ~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v 285 (384)
T PLN02580 206 KSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRL 285 (384)
T ss_pred cccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEE
Confidence 00100 000000111111111 1111123344444322 1122222222222 222222
Q ss_pred ccceeEEEEeCcc---cHHHHHHHhhcCC----C-e--EEEEcCCcccHHhHHh-----CCccEEecCCchHHHHhhccc
Q 003364 719 LSRTAICCRVTPS---QKAQLVELLKSCD----Y-R--TLAIGDGGNDVRMIQK-----ADIGVGISGREGLQAARAADY 783 (826)
Q Consensus 719 ~~~~~i~~~~~p~---~K~~iv~~l~~~~----~-~--v~~iGDg~ND~~ml~~-----A~vgIam~gn~~~~~~~~Ad~ 783 (826)
....-..++.|. +|+..++.+.+.. . . +++|||+.||.+||+. +|+||+| +|+..+ -.|+|
T Consensus 286 -~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~V-gn~~~~--t~A~y 361 (384)
T PLN02580 286 -THGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILV-SSVPKE--SNAFY 361 (384)
T ss_pred -EeCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEE-ecCCCC--ccceE
Confidence 223355788883 7999888876531 2 2 4899999999999996 6999999 775422 26788
Q ss_pred cccchhcchhh
Q 003364 784 SIGKFRFLKRL 794 (826)
Q Consensus 784 v~~~~~~l~~l 794 (826)
.+.+-.++..+
T Consensus 362 ~L~dp~eV~~~ 372 (384)
T PLN02580 362 SLRDPSEVMEF 372 (384)
T ss_pred EcCCHHHHHHH
Confidence 88766665553
No 82
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.09 E-value=9e-06 Score=81.83 Aligned_cols=126 Identities=23% Similarity=0.233 Sum_probs=90.4
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
...+-|++++++..|+++|++..++|+++...+..+.+..|+...-.. ++. +.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~--i~g--~~----------------------- 139 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDV--IVG--GD----------------------- 139 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccce--EEc--CC-----------------------
Confidence 446789999999999999999999999999999999999998544221 000 00
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCC---ccE
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD---IGV 767 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~---vgI 767 (826)
.....+-.|.....+++.++..+++++||||+.+|+.|=+.|| +||
T Consensus 140 -------------------------------~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v 188 (220)
T COG0546 140 -------------------------------DVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGV 188 (220)
T ss_pred -------------------------------CCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEE
Confidence 0000011333455677777766568999999999999999999 556
Q ss_pred EecCCchHHHHh-hccccccchhcchhh
Q 003364 768 GISGREGLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 768 am~gn~~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
..+.+..+.... .+|+++.+...|...
T Consensus 189 ~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 189 TWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred ECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 662233444555 699999888776553
No 83
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.02 E-value=1.7e-05 Score=78.83 Aligned_cols=107 Identities=14% Similarity=0.043 Sum_probs=73.7
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEE-ecCCCHHHHHHHHHHHHHHcccccCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDGKTEDEVCRSLERVLLTMRITTSE 689 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (826)
...+.+++.+.++.++++|++++++||.+...+..+++.+|+...-.. .+.. .+|.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~-~l~~~~~g~---------------------- 141 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT-RLEESEDGI---------------------- 141 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec-ceEEcCCCE----------------------
Confidence 446889999999999999999999999999999999999998432100 0000 0000
Q ss_pred CCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhc----CCCeEEEEcCCcccHHhHHhCCc
Q 003364 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 690 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~ml~~A~v 765 (826)
.+|. ...-.+....|...++.+.. ..+.++++||+.+|++|++.||.
T Consensus 142 -------~~g~----------------------~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~ 192 (202)
T TIGR01490 142 -------YTGN----------------------IDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGH 192 (202)
T ss_pred -------EeCC----------------------ccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCC
Confidence 0000 00001234567766665433 24579999999999999999999
Q ss_pred cEEe
Q 003364 766 GVGI 769 (826)
Q Consensus 766 gIam 769 (826)
++++
T Consensus 193 ~~~v 196 (202)
T TIGR01490 193 PYVV 196 (202)
T ss_pred cEEe
Confidence 9998
No 84
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.02 E-value=2.6e-05 Score=79.85 Aligned_cols=70 Identities=16% Similarity=0.180 Sum_probs=51.2
Q ss_pred eeEEEEeCcc--cHHHHHHHhhcC----CCeEEEEcCCcccHHhHHhC--------CccEEecCCchHHHHhhccccccc
Q 003364 722 TAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKA--------DIGVGISGREGLQAARAADYSIGK 787 (826)
Q Consensus 722 ~~i~~~~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~ml~~A--------~vgIam~gn~~~~~~~~Ad~v~~~ 787 (826)
...+.++.|. +|+..++.+... ...++++||+.||.+|++.+ ++||+| +.+ ..+..|++++++
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v-~~g--~~~~~A~~~~~~ 231 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPI-GSG--SKKTVAKFHLTG 231 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEE-ecC--CcCCCceEeCCC
Confidence 3445566665 799877776543 46899999999999999999 578888 422 245579999988
Q ss_pred hhcchhh
Q 003364 788 FRFLKRL 794 (826)
Q Consensus 788 ~~~l~~l 794 (826)
...+..+
T Consensus 232 ~~~v~~~ 238 (244)
T TIGR00685 232 PQQVLEF 238 (244)
T ss_pred HHHHHHH
Confidence 7766543
No 85
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.01 E-value=1.6e-05 Score=77.25 Aligned_cols=40 Identities=23% Similarity=0.250 Sum_probs=37.6
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
+++++.+.++.++++|++++++||.....+..++..+|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999999974
No 86
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.98 E-value=2.7e-05 Score=78.12 Aligned_cols=117 Identities=17% Similarity=0.135 Sum_probs=82.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|++++++|+.+...+..+.+..|+....+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----------------------------------- 129 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS----------------------------------- 129 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc-----------------------------------
Confidence 578999999999999999999999999999999999988733211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Cc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
..+..+- .| .-=..+++.++...+++++|||+.+|++|.+.||+.
T Consensus 130 -----------------------------~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~ 180 (213)
T TIGR01449 130 -----------------------------VLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCP 180 (213)
T ss_pred -----------------------------EEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCe
Confidence 0011111 11 111345666666678899999999999999999986
Q ss_pred EEec--CC-chHHHH-hhccccccchhcchh
Q 003364 767 VGIS--GR-EGLQAA-RAADYSIGKFRFLKR 793 (826)
Q Consensus 767 Iam~--gn-~~~~~~-~~Ad~v~~~~~~l~~ 793 (826)
.... |. ...... ..||+++.+...+..
T Consensus 181 ~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 181 SVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred EEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 5431 22 122333 368888887766644
No 87
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.98 E-value=2.3e-05 Score=79.46 Aligned_cols=123 Identities=24% Similarity=0.281 Sum_probs=85.0
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.++.|++.++++.|+++|++++++||.....+....+..|+...... ++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~----------------------------- 140 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--VI----------------------------- 140 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE--EE-----------------------------
Confidence 45789999999999999999999999999999999999987432110 00
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc-cEE
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVG 768 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v-gIa 768 (826)
....+ ....| .--..+++.++...+++++|||+.+|++|.+.||+ +|.
T Consensus 141 ----------------------------~~~~~-~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~ 191 (226)
T PRK13222 141 ----------------------------GGDSL-PNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVG 191 (226)
T ss_pred ----------------------------cCCCC-CCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEE
Confidence 00000 01111 11234666666677899999999999999999998 555
Q ss_pred ec-CCc-hHHHH-hhccccccchhcchhh
Q 003364 769 IS-GRE-GLQAA-RAADYSIGKFRFLKRL 794 (826)
Q Consensus 769 m~-gn~-~~~~~-~~Ad~v~~~~~~l~~l 794 (826)
+. |.. ..+.. ..+++++.++..|..+
T Consensus 192 v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 192 VTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred ECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 51 211 22333 3788888888777663
No 88
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.98 E-value=1.9e-05 Score=78.65 Aligned_cols=122 Identities=17% Similarity=0.217 Sum_probs=83.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.+++.++++.|+++|+++.++||.+...+....+..|+....+. ++.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~--i~~----------------------------- 123 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH--VIG----------------------------- 123 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee--EEe-----------------------------
Confidence 6789999999999999999999999999989888888887332110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeE-EEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEE-e-
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAI-CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG-I- 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIa-m- 769 (826)
.... ..+-.|.-=..+++.++..++++++|||+.+|+.+-+.+|+... +
T Consensus 124 ----------------------------~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~ 175 (205)
T TIGR01454 124 ----------------------------SDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAAL 175 (205)
T ss_pred ----------------------------cCcCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEE
Confidence 0000 00001111235666666667889999999999999999998643 2
Q ss_pred cCC-chHHHH-hhccccccchhcchh
Q 003364 770 SGR-EGLQAA-RAADYSIGKFRFLKR 793 (826)
Q Consensus 770 ~gn-~~~~~~-~~Ad~v~~~~~~l~~ 793 (826)
.|. ...++. ..+|+++.+...|..
T Consensus 176 ~g~~~~~~l~~~~~~~~~~~~~~l~~ 201 (205)
T TIGR01454 176 WGEGDAGELLAARPDFLLRKPQSLLA 201 (205)
T ss_pred ecCCChhhhhhcCCCeeeCCHHHHHH
Confidence 122 233343 478999888776654
No 89
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.96 E-value=1.9e-05 Score=72.70 Aligned_cols=43 Identities=21% Similarity=0.342 Sum_probs=39.7
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
..++.+++.+.+++|+++|++++++||+....+...++.+|+.
T Consensus 22 ~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred cCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 3478999999999999999999999999999999999999874
No 90
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.92 E-value=3.7e-05 Score=75.44 Aligned_cols=113 Identities=17% Similarity=0.205 Sum_probs=74.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-++.+++.+.++.|++.|+++.++|+.+...+..+.+..|+....+. ++. +....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--i~~-~~~~~---------------------- 125 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE--IYS-NPASF---------------------- 125 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE--Eec-cCceE----------------------
Confidence 47889999999999999999999999999999999998887432110 110 00000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccc-eeEEEEe-CcccHHHHHHHhhcC-CCeEEEEcCCcccHHhHHhCCccEE
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSR-TAICCRV-TPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVG 768 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~-~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgIa 768 (826)
++.. .+..... ...+... ....|..+++.++.. .+.++++|||.||++|.+.||+-.|
T Consensus 126 ------~~~g-------------~~~~~~~~~~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 126 ------DNDG-------------RHIVWPHHCHGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred ------CCCC-------------cEEEecCCCCccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 0000 0000000 0011111 112588999998877 8899999999999999999987544
No 91
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.90 E-value=4.5e-05 Score=79.32 Aligned_cols=119 Identities=20% Similarity=0.233 Sum_probs=83.0
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.++.|++.++|+.|+++|++++++||.+...+..+....|+....+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~---------------------------------- 145 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR---------------------------------- 145 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe----------------------------------
Confidence 3678999999999999999999999999988888888888622110
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH------HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K------~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v 765 (826)
..+..+..+..| ..+++.++...+.+++|||+.||++|-+.||+
T Consensus 146 ------------------------------~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi 195 (272)
T PRK13223 146 ------------------------------WIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGV 195 (272)
T ss_pred ------------------------------EEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCC
Confidence 111111122222 24555555567899999999999999999997
Q ss_pred c-EEec-C-CchHHHHh-hccccccchhcchhh
Q 003364 766 G-VGIS-G-REGLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 766 g-Iam~-g-n~~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
. +++. | +...+... .+|+++.+...|..+
T Consensus 196 ~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~ 228 (272)
T PRK13223 196 QCVALSYGYNHGRPIAEESPALVIDDLRALLPG 228 (272)
T ss_pred eEEEEecCCCCchhhhhcCCCEEECCHHHHHHH
Confidence 3 4441 2 22333343 789998877766554
No 92
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.88 E-value=4.9e-05 Score=76.80 Aligned_cols=123 Identities=12% Similarity=0.075 Sum_probs=82.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
-++.|++.++|+.|+++|++++++||.....+..+.+..|+...-+. ++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~----------------------------- 139 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA--LA----------------------------- 139 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE--EE-----------------------------
Confidence 46789999999999999999999999999999999999887432210 00
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeE-EEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAI-CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
. ...+ ..+-.|.-=..+++.++...+++++|||+.+|+++-+.||+.....
T Consensus 140 ------~----------------------~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v 191 (222)
T PRK10826 140 ------S----------------------AEKLPYSKPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVV 191 (222)
T ss_pred ------E----------------------cccCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEe
Confidence 0 0000 0000111112455556556788999999999999999999876442
Q ss_pred CC--chHHH-Hhhccccccchhcchh
Q 003364 771 GR--EGLQA-ARAADYSIGKFRFLKR 793 (826)
Q Consensus 771 gn--~~~~~-~~~Ad~v~~~~~~l~~ 793 (826)
.. ...+. ...||+++.++..+..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 192 PAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred cCCccCchhhhhhhheeccCHHHHhh
Confidence 22 12222 2368888888776644
No 93
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.88 E-value=5.2e-05 Score=76.10 Aligned_cols=123 Identities=17% Similarity=0.116 Sum_probs=82.6
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|+++.++||.....+....+..|+....+. ++.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--i~~----------------------------- 130 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDV--VIT----------------------------- 130 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeE--EEe-----------------------------
Confidence 3679999999999999999999999999999999999987432110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEE-e-c
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG-I-S 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIa-m-~ 770 (826)
.+ ..-...-.|.--..+++.++...+++++|||+.+|+.+-+.||+-.. + .
T Consensus 131 ------~~---------------------~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~ 183 (214)
T PRK13288 131 ------LD---------------------DVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAW 183 (214)
T ss_pred ------cC---------------------cCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcC
Confidence 00 00000111222235666666667889999999999999999998432 2 1
Q ss_pred CC-chHHHHh-hccccccchhcchh
Q 003364 771 GR-EGLQAAR-AADYSIGKFRFLKR 793 (826)
Q Consensus 771 gn-~~~~~~~-~Ad~v~~~~~~l~~ 793 (826)
|- ...++.+ .+|+++.++..+..
T Consensus 184 g~~~~~~l~~~~~~~~i~~~~~l~~ 208 (214)
T PRK13288 184 TIKGREYLEQYKPDFMLDKMSDLLA 208 (214)
T ss_pred CCCCHHHHhhcCcCEEECCHHHHHH
Confidence 32 2233433 58888887776655
No 94
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=97.79 E-value=0.00025 Score=84.55 Aligned_cols=188 Identities=19% Similarity=0.221 Sum_probs=100.3
Q ss_pred CcEEEEEEeeccccCCchHHHHHHH-HHcCCeEEEEcCCChhHHHHHHHHcC-CCCCCCCCcEEEecCCCH--------H
Q 003364 601 DLKVLGVTAIEDRLQDGVPETIETL-RKAGINFWMLTGDKQNTAIQIALSCN-FISPEPKGQLLSIDGKTE--------D 670 (826)
Q Consensus 601 ~l~~lG~i~~~d~l~~~~~~aI~~l-~~~Gi~v~i~TGd~~~~a~~~a~~~g-i~~~~~~~~~~~~~~~~~--------~ 670 (826)
|.+++-.-.....+.+++.+++++| ++.|+.|+++|||+..+.......+. +.--..+|..+...+... +
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~ 683 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVAD 683 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhh
Confidence 4444433222335678999999997 78899999999999999988875442 211122333333222210 1
Q ss_pred HHHH-HHHHHHHHccc----ccCCCCceEEEEcChh----H-----HHHHHHHHHHHhhh-ccccceeEEEEeCcc--cH
Q 003364 671 EVCR-SLERVLLTMRI----TTSEPKDVAFVVDGWA----L-----EIALKHYRKAFTEL-AILSRTAICCRVTPS--QK 733 (826)
Q Consensus 671 ~~~~-~~~~~~~~~~~----~~~~~~~~~l~~~g~~----~-----~~~~~~~~~~~~~~-~~~~~~~i~~~~~p~--~K 733 (826)
.... ........... ..-+.+...++..-.. + +.....+...+... ..+.......++.|. +|
T Consensus 684 ~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnK 763 (854)
T PLN02205 684 CSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSK 763 (854)
T ss_pred HHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCH
Confidence 1111 11111111100 0111233444432211 1 11222222222211 122234456788887 69
Q ss_pred HHHHHHhhc-------CCCeEEEEcCCcccHHhHHhCC--------------ccEEecCCchHHHHhhccccccchhcch
Q 003364 734 AQLVELLKS-------CDYRTLAIGDGGNDVRMIQKAD--------------IGVGISGREGLQAARAADYSIGKFRFLK 792 (826)
Q Consensus 734 ~~iv~~l~~-------~~~~v~~iGDg~ND~~ml~~A~--------------vgIam~gn~~~~~~~~Ad~v~~~~~~l~ 792 (826)
+..++.+.. ..+.+++|||+.||.+||+.++ ++|.+ |... ..|.|-+.+-.++.
T Consensus 764 G~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~V-G~~~----S~A~y~L~d~~eV~ 838 (854)
T PLN02205 764 GLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTV-GQKP----SKAKYYLDDTAEIV 838 (854)
T ss_pred HHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEE-CCCC----ccCeEecCCHHHHH
Confidence 998888742 3468999999999999999886 45566 5432 25566665555544
Q ss_pred h
Q 003364 793 R 793 (826)
Q Consensus 793 ~ 793 (826)
.
T Consensus 839 ~ 839 (854)
T PLN02205 839 R 839 (854)
T ss_pred H
Confidence 4
No 95
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.70 E-value=0.00015 Score=74.68 Aligned_cols=122 Identities=15% Similarity=0.177 Sum_probs=83.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.+++.++++.|+++|+++.++|+.+...+..+.+.+|+....+. ++.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--ii~----------------------------- 157 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV--VLA----------------------------- 157 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE--EEe-----------------------------
Confidence 4689999999999999999999999999999999999987432110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEE-EEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE-Eec
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GIS 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am~ 770 (826)
+ ..+. ..-.|.-=..+++.++...+++++|||+.+|+.+=+.||+-. ++.
T Consensus 158 ------~----------------------~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 158 ------A----------------------EDVYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVA 209 (260)
T ss_pred ------c----------------------ccCCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEe
Confidence 0 0000 000111113566667767788999999999999999999844 443
Q ss_pred CCchHHHHhhccccccchhcchh
Q 003364 771 GREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 771 gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
+.........+|+++.++..+..
T Consensus 210 g~~~~~~l~~ad~vi~~~~el~~ 232 (260)
T PLN03243 210 GKHPVYELSAGDLVVRRLDDLSV 232 (260)
T ss_pred cCCchhhhccCCEEeCCHHHHHH
Confidence 33222222357888877766644
No 96
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.70 E-value=0.00018 Score=72.89 Aligned_cols=124 Identities=19% Similarity=0.144 Sum_probs=83.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|+++|+++.++|+.+...+..+.+..|+..... ++
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~---~i------------------------------ 141 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA---VL------------------------------ 141 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc---EE------------------------------
Confidence 578999999999999999999999999888888888888732110 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEE-e-c
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG-I-S 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIa-m-~ 770 (826)
+.+. .....+-.|.-=..+++.++..++++++|||+.+|+.|-+.||+... + .
T Consensus 142 ----~~~~---------------------~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 196 (229)
T PRK13226 142 ----IGGD---------------------TLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALW 196 (229)
T ss_pred ----EecC---------------------cCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEee
Confidence 0000 00000111111235677777778899999999999999999998652 2 1
Q ss_pred CC--chHHHH-hhccccccchhcchhh
Q 003364 771 GR--EGLQAA-RAADYSIGKFRFLKRL 794 (826)
Q Consensus 771 gn--~~~~~~-~~Ad~v~~~~~~l~~l 794 (826)
|. ..+... ..+|+++.+...|..+
T Consensus 197 g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 197 GYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred cCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 21 112232 3689999888777653
No 97
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.67 E-value=0.00021 Score=73.78 Aligned_cols=124 Identities=19% Similarity=0.157 Sum_probs=82.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.|+.|+++|+++.++||.+...+..+.+..|+...... .++
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d-~ii------------------------------ 147 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPD-YNV------------------------------ 147 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCc-eEE------------------------------
Confidence 4679999999999999999999999999999998888887432100 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEE-EEeCcccHHHHHHHhhcC-CCeEEEEcCCcccHHhHHhCCccE-Ee
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGV-GI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgI-am 769 (826)
.+ ..+. ..-.|.-=..+++.+... .+++++|||+.+|+.+=+.||+.. ++
T Consensus 148 -----~~----------------------~~~~~~KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 148 -----TT----------------------DDVPAGRPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred -----cc----------------------ccCCCCCCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEE
Confidence 00 0000 001111123456666653 678999999999999999999644 22
Q ss_pred -cCCc------------------------hHHHHh-hccccccchhcchhh
Q 003364 770 -SGRE------------------------GLQAAR-AADYSIGKFRFLKRL 794 (826)
Q Consensus 770 -~gn~------------------------~~~~~~-~Ad~v~~~~~~l~~l 794 (826)
.|.. ..++.. -+|++++++..+..+
T Consensus 201 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~ 251 (253)
T TIGR01422 201 ILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAELPAV 251 (253)
T ss_pred ecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHh
Confidence 1321 234444 589999888776553
No 98
>PRK08238 hypothetical protein; Validated
Probab=97.66 E-value=0.00025 Score=79.09 Aligned_cols=92 Identities=15% Similarity=0.190 Sum_probs=69.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
+++|++.+.+++++++|++++++|+.+...+..+++.+|+... ++..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~~------------------------- 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDGT------------------------- 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCCc-------------------------
Confidence 4779999999999999999999999999999999999997211 1111100
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHH-HhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVE-LLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~-~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.+..|+.|...+. .+.+ +.+.++||+.+|++|++.|+-.+++
T Consensus 122 ---------------------------------~~~kg~~K~~~l~~~l~~--~~~~yvGDS~~Dlp~~~~A~~av~V 164 (479)
T PRK08238 122 ---------------------------------TNLKGAAKAAALVEAFGE--RGFDYAGNSAADLPVWAAARRAIVV 164 (479)
T ss_pred ---------------------------------cccCCchHHHHHHHHhCc--cCeeEecCCHHHHHHHHhCCCeEEE
Confidence 0234455655443 3332 3367889999999999999999999
No 99
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.64 E-value=0.00037 Score=69.21 Aligned_cols=105 Identities=17% Similarity=0.183 Sum_probs=71.4
Q ss_pred ccCCchHHHHH-HHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIE-TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~-~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.+.|++.++|+ .++++|++++++|+-+...+.++++..++..... ++..+ .+.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~---~i~t~-le~---------------------- 147 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN---LIASQ-IER---------------------- 147 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc---EEEEE-eEE----------------------
Confidence 46899999996 7888999999999999999999998866533211 11100 000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHH-hhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVEL-LKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~-l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.+| .......+.-+.|..-++. +....+...+-||+.||.|||+.||.++++
T Consensus 148 -----~~g---------------------g~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 148 -----GNG---------------------GWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred -----eCC---------------------ceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 000 0001112334568775654 443445668999999999999999999999
No 100
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.62 E-value=0.0003 Score=72.94 Aligned_cols=116 Identities=16% Similarity=0.127 Sum_probs=81.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|+++.++|+.....+....+..|+...-+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~---------------------------------- 187 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSV---------------------------------- 187 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEE----------------------------------
Confidence 5679999999999999999999999999999999999997332110
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH----HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK----AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG 768 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K----~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIa 768 (826)
+ +..+..+ .| ..+++.++..++++++|||+.+|+.+-+.||+-..
T Consensus 188 ---v---------------------------i~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I 236 (273)
T PRK13225 188 ---V---------------------------QAGTPIL-SKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAV 236 (273)
T ss_pred ---E---------------------------EecCCCC-CCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 0 0000000 12 23444555556789999999999999999997543
Q ss_pred e--cC-CchHHHHh-hccccccchhcchh
Q 003364 769 I--SG-REGLQAAR-AADYSIGKFRFLKR 793 (826)
Q Consensus 769 m--~g-n~~~~~~~-~Ad~v~~~~~~l~~ 793 (826)
. .| +...++.. .||+++.+...|..
T Consensus 237 ~v~~g~~~~~~l~~~~ad~~i~~~~eL~~ 265 (273)
T PRK13225 237 AVTWGFNDRQSLVAACPDWLLETPSDLLQ 265 (273)
T ss_pred EEecCCCCHHHHHHCCCCEEECCHHHHHH
Confidence 2 12 23333433 68999888777655
No 101
>PRK11590 hypothetical protein; Provisional
Probab=97.59 E-value=0.00043 Score=69.16 Aligned_cols=105 Identities=14% Similarity=0.141 Sum_probs=71.6
Q ss_pred ccCCchHHHH-HHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETI-ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI-~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.+.|++.+.| +.+++.|++++++|+.+...+.+++..+|+.... . ++..+-.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~--~i~t~l~------------------------ 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-N--LIASQMQ------------------------ 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-c--eEEEEEE------------------------
Confidence 4579999999 5788899999999999999999999998852211 0 1111000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHH-hhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVEL-LKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~-l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
...+| ......+..+.|..-++. +........+-||+.||.|||+.|+.++++
T Consensus 148 ---~~~tg----------------------~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~v 201 (211)
T PRK11590 148 ---RRYGG----------------------WVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRV 201 (211)
T ss_pred ---EEEcc----------------------EECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEE
Confidence 00000 001112334568776654 444455678999999999999999999999
No 102
>PLN03017 trehalose-phosphatase
Probab=97.58 E-value=0.0017 Score=68.68 Aligned_cols=190 Identities=14% Similarity=0.144 Sum_probs=103.7
Q ss_pred cCcEEEEEEeecc--ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCC----------
Q 003364 600 HDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK---------- 667 (826)
Q Consensus 600 ~~l~~lG~i~~~d--~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~---------- 667 (826)
-|.+++-+..-.+ .+.+++.++|++|. +|+.++++|||+...+..+..-.++.--..+|..+...+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~ 196 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQ 196 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceecccccc
Confidence 4777776665333 58899999999999 7899999999999999887432221111112222111000
Q ss_pred -----CHHHHHHHHHHHHHHc-------ccccCCCCceEEEEcCh-----hHHHHHHHHHH---HHhhhccccceeEEEE
Q 003364 668 -----TEDEVCRSLERVLLTM-------RITTSEPKDVAFVVDGW-----ALEIALKHYRK---AFTELAILSRTAICCR 727 (826)
Q Consensus 668 -----~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~g~-----~~~~~~~~~~~---~~~~~~~~~~~~i~~~ 727 (826)
...+....+......+ .-..-+.+.+++.+... ....+...... .++.+. +.....-.+
T Consensus 197 ~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~-v~~GkkVlE 275 (366)
T PLN03017 197 SLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLK-LTQGRKVFE 275 (366)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcE-EeCCCeEEE
Confidence 0000001111111111 11111234445543322 11222222222 222222 223445568
Q ss_pred eCcc---cHHHHHHHhhcC-------CCeEEEEcCCcccHHhHHhC-----CccEEecCCchHHHHhhccccccchhcch
Q 003364 728 VTPS---QKAQLVELLKSC-------DYRTLAIGDGGNDVRMIQKA-----DIGVGISGREGLQAARAADYSIGKFRFLK 792 (826)
Q Consensus 728 ~~p~---~K~~iv~~l~~~-------~~~v~~iGDg~ND~~ml~~A-----~vgIam~gn~~~~~~~~Ad~v~~~~~~l~ 792 (826)
+.|. +|+.+++.|... ..-++++||...|-.||+.. |+||.+ |.... ...|+|.+.+-....
T Consensus 276 vRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-G~~~k--~T~A~y~L~dp~eV~ 352 (366)
T PLN03017 276 IRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV-SKFPK--DTDASYSLQDPSEVM 352 (366)
T ss_pred ecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE-CCCCC--CCcceEeCCCHHHHH
Confidence 8773 899999988753 23589999999999999976 467777 53211 236888887666555
Q ss_pred hh
Q 003364 793 RL 794 (826)
Q Consensus 793 ~l 794 (826)
.+
T Consensus 353 ~f 354 (366)
T PLN03017 353 DF 354 (366)
T ss_pred HH
Confidence 54
No 103
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.58 E-value=0.00033 Score=70.66 Aligned_cols=123 Identities=20% Similarity=0.239 Sum_probs=81.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC--CCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI--SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (826)
.++.+++.+.++.|+++|+++.++||.....+....+..|+. ...+. ++ .
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~--i~-~------------------------- 137 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDA--VV-C------------------------- 137 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCE--EE-c-------------------------
Confidence 378899999999999999999999999999999999988874 21110 00 0
Q ss_pred CCceEEEEcChhHHHHHHHHHHHHhhhccccceeEE-EEeCcccHHHHHHHhhcC-CCeEEEEcCCcccHHhHHhCCccE
Q 003364 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 690 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
. .... .+-.|.-=..+++.+... ++++++|||+.+|+.+-+.||+..
T Consensus 138 ---------~----------------------~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 138 ---------P----------------------SDVAAGRPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred ---------C----------------------CcCCCCCCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 0 0000 001111112445555554 578999999999999999999986
Q ss_pred --Ee-cC-CchHHHHh-hccccccchhcchh
Q 003364 768 --GI-SG-REGLQAAR-AADYSIGKFRFLKR 793 (826)
Q Consensus 768 --am-~g-n~~~~~~~-~Ad~v~~~~~~l~~ 793 (826)
++ .| +....... .+++++.++..+..
T Consensus 187 ~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~ 217 (220)
T TIGR03351 187 VVGVLTGAHDAEELSRHPHTHVLDSVADLPA 217 (220)
T ss_pred EEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence 23 12 22233333 57888777666544
No 104
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.52 E-value=0.00055 Score=64.41 Aligned_cols=39 Identities=18% Similarity=0.212 Sum_probs=34.3
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHH---HHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI---QIALS 649 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~---~~a~~ 649 (826)
++.+.+++.+++++++++|++++++|||+...+. ....+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 4688999999999999999999999999998875 55555
No 105
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.52 E-value=0.00047 Score=70.79 Aligned_cols=114 Identities=12% Similarity=0.071 Sum_probs=82.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|+++.++|+.+...+....+.+|+....+.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~---------------------------------- 153 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQA---------------------------------- 153 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcE----------------------------------
Confidence 4679999999999999999999999999999999999998432211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE------eCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR------VTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~------~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
.++++ -.|.-=..+++.++..++++++|||+.+|+.+=+.||+-
T Consensus 154 ------------------------------iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~ 203 (248)
T PLN02770 154 ------------------------------VIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMP 203 (248)
T ss_pred ------------------------------EEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCE
Confidence 11111 112222456677776778899999999999999999975
Q ss_pred EEe--cCCchHHHHh-hccccccchhc
Q 003364 767 VGI--SGREGLQAAR-AADYSIGKFRF 790 (826)
Q Consensus 767 Iam--~gn~~~~~~~-~Ad~v~~~~~~ 790 (826)
... .+....++.. .+|+++.++..
T Consensus 204 ~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 204 VVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred EEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 432 1333333433 68888877765
No 106
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.48 E-value=0.00053 Score=71.33 Aligned_cols=41 Identities=24% Similarity=0.174 Sum_probs=36.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
.+-|++.++|+.|+++|+++.++||.+...+..+.+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 46799999999999999999999999998888887777653
No 107
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=97.46 E-value=5.5e-05 Score=59.24 Aligned_cols=47 Identities=19% Similarity=0.195 Sum_probs=39.9
Q ss_pred CCccccccCCCceEEeec-ccccccccHHHHHHhhhHHHHHHHHHHHHhhcc
Q 003364 9 DDETSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWS 59 (826)
Q Consensus 9 ~~~~r~~~~g~N~i~~~~-~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~ 59 (826)
+.++|+++||+|+++.++ .++| ..++++|.+|++++++++++++++.
T Consensus 15 ~v~~r~~~~G~N~l~~~~~~s~~----~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 15 EAARRLERYGPNELPPPKKRSPL----LRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred HHHHHHHHhCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 446799999999999986 5566 8899999999998888888888753
No 108
>PRK11587 putative phosphatase; Provisional
Probab=97.46 E-value=0.00056 Score=68.78 Aligned_cols=120 Identities=13% Similarity=0.097 Sum_probs=78.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++|+.|+++|+++.++|+.+...+....+..|+... . .++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~--~i~------------------------------ 129 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-E--VFV------------------------------ 129 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-c--EEE------------------------------
Confidence 5679999999999999999999999987776666666665211 0 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc-EEecC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGISG 771 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg-Iam~g 771 (826)
.++. .....-.|.-=..+++.++..++++++|||+.+|+.+=+.||+. |++ .
T Consensus 130 -----~~~~---------------------~~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v-~ 182 (218)
T PRK11587 130 -----TAER---------------------VKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAV-N 182 (218)
T ss_pred -----EHHH---------------------hcCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEE-C
Confidence 0000 00001122222355666777789999999999999999999984 555 3
Q ss_pred CchH-HHHhhccccccchhcch
Q 003364 772 REGL-QAARAADYSIGKFRFLK 792 (826)
Q Consensus 772 n~~~-~~~~~Ad~v~~~~~~l~ 792 (826)
+... .....+|+++.++..|.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 183 APADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred CCCchhhhccCCEEecchhhee
Confidence 3222 22236788887766553
No 109
>PRK06769 hypothetical protein; Validated
Probab=97.44 E-value=0.00059 Score=65.62 Aligned_cols=60 Identities=18% Similarity=0.052 Sum_probs=40.6
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe--cCCchH-------HHH-hhccccccchhcchh
Q 003364 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI--SGREGL-------QAA-RAADYSIGKFRFLKR 793 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam--~gn~~~-------~~~-~~Ad~v~~~~~~l~~ 793 (826)
..+++.++...+++++|||+.+|+.+=+.||+-... .|.... ++. ..+++++.++..+..
T Consensus 100 ~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~ 169 (173)
T PRK06769 100 LQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVN 169 (173)
T ss_pred HHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHH
Confidence 356666666678999999999999999999975533 122211 122 247777777666654
No 110
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.44 E-value=0.00065 Score=72.73 Aligned_cols=117 Identities=16% Similarity=0.128 Sum_probs=82.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.+++.+.++.|+++|+++.++|+.+...+..+.+..|+....+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd----------------------------------- 260 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS----------------------------------- 260 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce-----------------------------------
Confidence 467999999999999999999999999999999999999833211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Ccc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
..+.++- -|. -=..+++.++..++++++|||+.+|+.+-+.||+-
T Consensus 261 -----------------------------~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~ 311 (381)
T PLN02575 261 -----------------------------VIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMK 311 (381)
T ss_pred -----------------------------EEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCE
Confidence 0111111 111 11356667776788999999999999999999975
Q ss_pred EEecCCchHHH-Hhhccccccchhcchh
Q 003364 767 VGISGREGLQA-ARAADYSIGKFRFLKR 793 (826)
Q Consensus 767 Iam~gn~~~~~-~~~Ad~v~~~~~~l~~ 793 (826)
........... ...||+++.+++.|..
T Consensus 312 ~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 312 CVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred EEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 53313322111 1258888888777643
No 111
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.27 E-value=0.0011 Score=66.85 Aligned_cols=90 Identities=16% Similarity=0.068 Sum_probs=66.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
.+.|++.+.++.|+++|+++.++|+-+...+....+..|+....+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd----------------------------------- 137 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLD----------------------------------- 137 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCC-----------------------------------
Confidence 578999999999999999999999988888888777788632111
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH------HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K------~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
..+..+-....| ..+++.++..++++++|||+.+|+.+=+.||+.
T Consensus 138 -----------------------------~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 138 -----------------------------LLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred -----------------------------EEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 111112111122 345566666678899999999999999999995
No 112
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=97.25 E-value=7e-05 Score=59.58 Aligned_cols=43 Identities=26% Similarity=0.309 Sum_probs=35.9
Q ss_pred CccccccCCCceEEeecc-cccccccHHHHHHhhhHHHHHHHHHHHHh
Q 003364 10 DETSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQ 56 (826)
Q Consensus 10 ~~~r~~~~g~N~i~~~~~-~~~~~l~~~l~~~~~~~~n~~~l~~~~l~ 56 (826)
.++|+++||+|+++.++. ++| ..|+++|.+|++++++++++++
T Consensus 26 v~~r~~~~G~N~l~~~~~~s~~----~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 26 VEERRKKYGPNELPEPKKKSLW----RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHSSSSTTTTTSSSHH----HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHhcccccccccccCcHH----HHHHHHHHhHHHHHHHHHHHHC
Confidence 356999999999976655 556 8999999999998888888775
No 113
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.24 E-value=0.0012 Score=66.46 Aligned_cols=97 Identities=15% Similarity=0.126 Sum_probs=67.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|++++++|+.+...+....+.+|+...-+. ++.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~--i~~----------------------------- 142 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDA--VIT----------------------------- 142 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccE--EEE-----------------------------
Confidence 5789999999999999999999999998888888888887322110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCcc-EE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIG-VG 768 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vg-Ia 768 (826)
...+ ...-|. -=..+++.++...+++++|||+. +|+.+=+.||+- |.
T Consensus 143 ----------------------------~~~~-~~~KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~ 193 (221)
T TIGR02253 143 ----------------------------SEEE-GVEKPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVW 193 (221)
T ss_pred ----------------------------eccC-CCCCCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEE
Confidence 0000 001121 11345666666678899999997 999999999974 44
Q ss_pred e
Q 003364 769 I 769 (826)
Q Consensus 769 m 769 (826)
+
T Consensus 194 ~ 194 (221)
T TIGR02253 194 I 194 (221)
T ss_pred E
Confidence 4
No 114
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.10 E-value=0.0033 Score=57.50 Aligned_cols=40 Identities=18% Similarity=0.269 Sum_probs=35.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCC--------hhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDK--------QNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~--------~~~a~~~a~~~gi 652 (826)
++.+++.++++.|+++|++++++|+.+ ...+....+.+|+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 678999999999999999999999998 6677778888876
No 115
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.09 E-value=0.0013 Score=64.93 Aligned_cols=42 Identities=14% Similarity=0.125 Sum_probs=37.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
+++.+.+.++++.|+++|+++.++||.+...+..+.+..|+.
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 346677799999999999999999999999999999999984
No 116
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.07 E-value=0.0023 Score=64.18 Aligned_cols=40 Identities=15% Similarity=0.227 Sum_probs=34.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCC----hhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDK----QNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~----~~~a~~~a~~~gi 652 (826)
.+.+++++.++.++++|+++.++|||+ ..++..+.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 466789999999999999999999986 4477777777887
No 117
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=97.06 E-value=0.0017 Score=59.77 Aligned_cols=104 Identities=13% Similarity=0.216 Sum_probs=74.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcC----CCCCC--CCCcEEEecCCCHHHHHHHHHHHHHHcccc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN----FISPE--PKGQLLSIDGKTEDEVCRSLERVLLTMRIT 686 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~g----i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (826)
.++|+-++.++.+++++++++++||-......++...++ |...+ ++..+++.+|.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~------------------- 133 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ------------------- 133 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc-------------------
Confidence 588999999999999999999999999988888887765 21110 00001111110
Q ss_pred cCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCC
Q 003364 687 TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 687 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ 764 (826)
+..++-.=++ .+|...|+.+++..+.+.++|||+.|+++-+.+|
T Consensus 134 ----------------------------------h~i~~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsD 179 (220)
T COG4359 134 ----------------------------------HSIKYTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSD 179 (220)
T ss_pred ----------------------------------eeeecCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhh
Confidence 0111111122 3799999999999999999999999999999999
Q ss_pred ccEEe
Q 003364 765 IGVGI 769 (826)
Q Consensus 765 vgIam 769 (826)
+=.|=
T Consensus 180 llFAK 184 (220)
T COG4359 180 LLFAK 184 (220)
T ss_pred hHhhH
Confidence 87664
No 118
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.05 E-value=0.0023 Score=63.33 Aligned_cols=95 Identities=16% Similarity=0.168 Sum_probs=68.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+++++|+++|++++++|+-+...+....+.+|+...-+. ++
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~--i~------------------------------ 139 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDA--VL------------------------------ 139 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhhe--eE------------------------------
Confidence 4679999999999999999999999999888888888887322110 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCccc--HHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~--K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
....+. ..-|.. =..+++.++..++++++|||+.+|+.+-+.||+..
T Consensus 140 ---------------------------~s~~~~-~~KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 140 ---------------------------SADAVR-AYKPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred ---------------------------ehhhcC-CCCCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 000000 001211 13466667667889999999999999999999864
No 119
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.98 E-value=0.0028 Score=66.35 Aligned_cols=123 Identities=13% Similarity=0.081 Sum_probs=77.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..+.........++
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v------------------------------ 193 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF------------------------------ 193 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE------------------------------
Confidence 47799999999999999999999999888777766654321110000000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEec
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~ 770 (826)
.+ ..+ ..--|. -=..+++.++..++++++|||+.+|+.+-+.||+.+...
T Consensus 194 -----~~----------------------~~~-~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v 245 (286)
T PLN02779 194 -----AG----------------------DDV-PKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVT 245 (286)
T ss_pred -----ec----------------------ccc-CCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEE
Confidence 00 000 000111 113466666666788999999999999999999876442
Q ss_pred CC--chHHHHhhccccccchhcchh
Q 003364 771 GR--EGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 771 gn--~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
.. ...+....+|+++.++..+..
T Consensus 246 ~~g~~~~~~l~~ad~vi~~~~~l~~ 270 (286)
T PLN02779 246 KSSYTADEDFSGADAVFDCLGDVPL 270 (286)
T ss_pred ccCCccccccCCCcEEECChhhcch
Confidence 22 111111357888877766543
No 120
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.98 E-value=0.0017 Score=65.33 Aligned_cols=39 Identities=13% Similarity=0.266 Sum_probs=34.3
Q ss_pred CCchHHHHHHHHHcCCeEEEEcCC----ChhHHHHHHHHcCCC
Q 003364 615 QDGVPETIETLRKAGINFWMLTGD----KQNTAIQIALSCNFI 653 (826)
Q Consensus 615 ~~~~~~aI~~l~~~Gi~v~i~TGd----~~~~a~~~a~~~gi~ 653 (826)
.+.+++.++.++++|+++.++|+| ...++..+.+.+|+.
T Consensus 116 ~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 116 KEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred hhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 344999999999999999999999 667888898889983
No 121
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.98 E-value=0.0021 Score=72.51 Aligned_cols=121 Identities=13% Similarity=0.107 Sum_probs=79.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.|+.|+++|+++.++|+.+...+....+.+|+...-+. ++..+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~--i~~~d--------------------------- 380 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE--TFSIE--------------------------- 380 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce--eEecC---------------------------
Confidence 5789999999999999999999999999999999999987432111 00000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE-Eec-
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GIS- 770 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am~- 770 (826)
.+...-.|.-=..+++.+ ..+++++|||+.+|+.+-+.||+.. ++.
T Consensus 381 ------------------------------~v~~~~kP~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~ 428 (459)
T PRK06698 381 ------------------------------QINSLNKSDLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNF 428 (459)
T ss_pred ------------------------------CCCCCCCcHHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeC
Confidence 000000111111223333 3578999999999999999999743 431
Q ss_pred CCchHHHHhhccccccchhcchhh
Q 003364 771 GREGLQAARAADYSIGKFRFLKRL 794 (826)
Q Consensus 771 gn~~~~~~~~Ad~v~~~~~~l~~l 794 (826)
+....+....+|+++.++..+..+
T Consensus 429 ~~~~~~~~~~~d~~i~~l~el~~~ 452 (459)
T PRK06698 429 DFAQEDELAQADIVIDDLLELKGI 452 (459)
T ss_pred CCCcccccCCCCEEeCCHHHHHHH
Confidence 221111223588888887777653
No 122
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.96 E-value=0.0034 Score=64.13 Aligned_cols=44 Identities=16% Similarity=0.327 Sum_probs=40.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~ 656 (826)
+++|++.+.++.|+++|+++.++||-....+..++++.|+..++
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 57999999999999999999999999999999999999986443
No 123
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.95 E-value=0.0022 Score=68.07 Aligned_cols=102 Identities=16% Similarity=0.072 Sum_probs=72.5
Q ss_pred eccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCC-CCCCCcEEEecCCCHHHHHHHHHHHHHHcccccC
Q 003364 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-PEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTS 688 (826)
Q Consensus 610 ~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (826)
..+++.+++.+++++|++.|++++++||++...+..+.+.+|+.. .-+. ++ +.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~--i~---~~--------------------- 237 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD--LI---GR--------------------- 237 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh--hh---CC---------------------
Confidence 456889999999999999999999999999999999999888743 1100 00 00
Q ss_pred CCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEE------EeCcccHHHHHHHhhc-CCCeEEEEcCCcccHHhHH
Q 003364 689 EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICC------RVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQ 761 (826)
Q Consensus 689 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~------~~~p~~K~~iv~~l~~-~~~~v~~iGDg~ND~~ml~ 761 (826)
.....|. +-.|.-+..+++.+.. ..+.+++|||..+|+.+-+
T Consensus 238 -------------------------------~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~ 286 (300)
T PHA02530 238 -------------------------------PPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWR 286 (300)
T ss_pred -------------------------------cchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHH
Confidence 0000011 1123345666666544 4588999999999999999
Q ss_pred hCCccEE
Q 003364 762 KADIGVG 768 (826)
Q Consensus 762 ~A~vgIa 768 (826)
.||+.+.
T Consensus 287 ~~Gi~~i 293 (300)
T PHA02530 287 RIGLECW 293 (300)
T ss_pred HhCCeEE
Confidence 9998753
No 124
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.94 E-value=0.0048 Score=58.80 Aligned_cols=54 Identities=17% Similarity=0.182 Sum_probs=45.3
Q ss_pred cCcEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCC-ChhHHHHHHHHcCCC
Q 003364 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD-KQNTAIQIALSCNFI 653 (826)
Q Consensus 600 ~~l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd-~~~~a~~~a~~~gi~ 653 (826)
.+.......+-+-++.|++.++++.|+++|+++.++|+. ....+..+...+|+.
T Consensus 32 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 32 NNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 344566666666689999999999999999999999987 888888888888873
No 125
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.93 E-value=0.016 Score=55.27 Aligned_cols=39 Identities=10% Similarity=0.158 Sum_probs=35.4
Q ss_pred CCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 615 ~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
.+.+.+.+.+|+++|++|+.+|.........+-+.+|+-
T Consensus 25 ~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 25 WQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 346778999999999999999999999999999999976
No 126
>PLN02940 riboflavin kinase
Probab=96.90 E-value=0.003 Score=68.99 Aligned_cols=115 Identities=15% Similarity=0.050 Sum_probs=76.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHH-HcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL-SCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
++.|++.+.++.|+++|+++.++|+.+...+..... ..|+....+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd---------------------------------- 138 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFS---------------------------------- 138 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCC----------------------------------
Confidence 467999999999999999999999999888777665 566522111
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Ccc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCc
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~v 765 (826)
..+..+- -|. -=..+++.++..++++++|||+.+|+.+-+.||+
T Consensus 139 ------------------------------~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi 188 (382)
T PLN02940 139 ------------------------------VIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGM 188 (382)
T ss_pred ------------------------------EEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCC
Confidence 0111111 111 1235666666678899999999999999999998
Q ss_pred cEEecCCch--HHHHhhccccccchhcc
Q 003364 766 GVGISGREG--LQAARAADYSIGKFRFL 791 (826)
Q Consensus 766 gIam~gn~~--~~~~~~Ad~v~~~~~~l 791 (826)
......... ......+|+++.++..+
T Consensus 189 ~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 189 EVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred EEEEECCCCcchhhccCccEEeCCHhHc
Confidence 653312211 21223577777666444
No 127
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.86 E-value=0.0061 Score=59.21 Aligned_cols=61 Identities=18% Similarity=0.163 Sum_probs=41.0
Q ss_pred HHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE-Ee-cCCchHHHH-hhc--cccccchhcchhh
Q 003364 734 AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-SGREGLQAA-RAA--DYSIGKFRFLKRL 794 (826)
Q Consensus 734 ~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am-~gn~~~~~~-~~A--d~v~~~~~~l~~l 794 (826)
..+++.++...+++++|||+.+|+.+-+.||+.. .+ .|....... ..+ |+++.++..+..+
T Consensus 110 ~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 110 LSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred HHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 3566666667789999999999999999999754 22 122221222 245 7787777666553
No 128
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.82 E-value=0.0029 Score=60.85 Aligned_cols=93 Identities=19% Similarity=0.221 Sum_probs=69.8
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (826)
..++.+++.+++++|+++|++++++|+.+...+....+.+|+....+. +
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~--i----------------------------- 123 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDE--I----------------------------- 123 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSE--E-----------------------------
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccccc--c-----------------------------
Confidence 346889999999999999999999999999999999999997422110 0
Q ss_pred CceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Cccc--HHHHHHHhhcCCCeEEEEcCCcccHHhHHhCC
Q 003364 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TPSQ--KAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 691 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p~~--K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ 764 (826)
+..+- .|.. =..+++.++..++++++|||+..|+.+-+.||
T Consensus 124 ---------------------------------~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G 170 (176)
T PF13419_consen 124 ---------------------------------ISSDDVGSRKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAG 170 (176)
T ss_dssp ---------------------------------EEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTT
T ss_pred ---------------------------------cccchhhhhhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcC
Confidence 11110 1111 13466666667889999999999999999998
Q ss_pred ccE
Q 003364 765 IGV 767 (826)
Q Consensus 765 vgI 767 (826)
+.-
T Consensus 171 ~~~ 173 (176)
T PF13419_consen 171 IKT 173 (176)
T ss_dssp SEE
T ss_pred CeE
Confidence 753
No 129
>PRK09449 dUMP phosphatase; Provisional
Probab=96.77 E-value=0.0052 Score=62.08 Aligned_cols=116 Identities=16% Similarity=0.120 Sum_probs=75.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+ +|+++.++|+.....+....+..|+...-+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd----------------------------------- 138 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFD----------------------------------- 138 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcC-----------------------------------
Confidence 46799999999999 689999999998888888888888732111
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Cccc--HHHHHHHhhcC-CCeEEEEcCCc-ccHHhHHhCC
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TPSQ--KAQLVELLKSC-DYRTLAIGDGG-NDVRMIQKAD 764 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p~~--K~~iv~~l~~~-~~~v~~iGDg~-ND~~ml~~A~ 764 (826)
..+.++- -|.. =..+++.++.. .+++++|||+. +|+.+=+.||
T Consensus 139 -----------------------------~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG 189 (224)
T PRK09449 139 -----------------------------LLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAG 189 (224)
T ss_pred -----------------------------EEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCC
Confidence 1111111 1111 12455666543 46899999998 7999999999
Q ss_pred ccE-EecCCchHHHH-hhccccccchhcchh
Q 003364 765 IGV-GISGREGLQAA-RAADYSIGKFRFLKR 793 (826)
Q Consensus 765 vgI-am~gn~~~~~~-~~Ad~v~~~~~~l~~ 793 (826)
+-. .+......... ..+|+++.++..|..
T Consensus 190 ~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~ 220 (224)
T PRK09449 190 IDTCWLNAHGREQPEGIAPTYQVSSLSELEQ 220 (224)
T ss_pred CcEEEECCCCCCCCCCCCCeEEECCHHHHHH
Confidence 854 44211111111 246777777666654
No 130
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.71 E-value=0.0042 Score=60.61 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=34.3
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
-++.|++.++++.|+++|++++++|+. ..+..+.+..|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 368899999999999999999999998 5567777788863
No 131
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.59 E-value=0.0086 Score=58.18 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=63.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.|+++|++++++|+.+... .....++|+...-+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~----------------------------------- 128 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD----------------------------------- 128 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC-----------------------------------
Confidence 577999999999999999999999998877 55555577632211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEe----Cc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
..++++- .| .-=..+++.++...+++++|||+..|+.+-+.+|+-
T Consensus 129 -----------------------------~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 129 -----------------------------VVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred -----------------------------EEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 0111110 11 111345666666688999999999999999999873
No 132
>PLN02811 hydrolase
Probab=96.55 E-value=0.0084 Score=60.34 Aligned_cols=59 Identities=15% Similarity=0.123 Sum_probs=39.7
Q ss_pred HHHHHHhh---cCCCeEEEEcCCcccHHhHHhCCccEEec--CCchHHHHhhccccccchhcch
Q 003364 734 AQLVELLK---SCDYRTLAIGDGGNDVRMIQKADIGVGIS--GREGLQAARAADYSIGKFRFLK 792 (826)
Q Consensus 734 ~~iv~~l~---~~~~~v~~iGDg~ND~~ml~~A~vgIam~--gn~~~~~~~~Ad~v~~~~~~l~ 792 (826)
..+++.+. ...+++++|||+..|+.+-+.||+..... +.........+|+++.++..+.
T Consensus 144 ~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~ 207 (220)
T PLN02811 144 LAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFK 207 (220)
T ss_pred HHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCC
Confidence 34566664 45688999999999999999999755331 2222222336788887766543
No 133
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=96.54 E-value=0.048 Score=55.92 Aligned_cols=50 Identities=12% Similarity=0.170 Sum_probs=40.6
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcC---CChhHHHHHHHHcCCCCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFISP 655 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TG---d~~~~a~~~a~~~gi~~~ 655 (826)
|.+.-.+..-+++.++|++|+++|++++++|| |+........+.+|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 44444555667999999999999999999996 888888888889997543
No 134
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.50 E-value=0.0039 Score=60.78 Aligned_cols=39 Identities=18% Similarity=0.322 Sum_probs=31.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
++.|++.++|+.|+++|+++.++|+... +....+.+|+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~ 125 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLI 125 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcH
Confidence 5679999999999999999999998643 45567777763
No 135
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.45 E-value=0.01 Score=56.08 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=27.4
Q ss_pred HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.+++.++...+++++|||+.+|+.+-+.+|+....
T Consensus 111 ~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 111 PYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred HHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 34455555567899999999999999999986543
No 136
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.41 E-value=0.014 Score=56.29 Aligned_cols=57 Identities=19% Similarity=0.173 Sum_probs=39.1
Q ss_pred HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE--Ee-cCCchHHHH-hhccccccchhcc
Q 003364 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV--GI-SGREGLQAA-RAADYSIGKFRFL 791 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI--am-~gn~~~~~~-~~Ad~v~~~~~~l 791 (826)
.+++.++...++++||||+..|+.+=+.||+.. .. .|....... ..||+++.++..|
T Consensus 114 ~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 114 QARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred HHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 455555656788999999999999999999853 33 232222222 2488888776655
No 137
>PLN02151 trehalose-phosphatase
Probab=96.40 E-value=0.03 Score=59.25 Aligned_cols=188 Identities=13% Similarity=0.139 Sum_probs=98.8
Q ss_pred CcEEEEEEeecc--ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEec-C-----------
Q 003364 601 DLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSID-G----------- 666 (826)
Q Consensus 601 ~l~~lG~i~~~d--~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~-~----------- 666 (826)
|.+++-+.---+ .+.++++++|+.|. ++..++++|||+...+..+..-.++.--...|.-+... +
T Consensus 106 DGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~ 184 (354)
T PLN02151 106 DGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSL 184 (354)
T ss_pred CccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCCccceEEEeCCceeecCCCCcccccccccc
Confidence 555554332223 37789999999999 56799999999999888776433321111111111000 0
Q ss_pred --CCHHHHHHHHHHHHHHcc-------cccCCCCceEEEEcCh-----hHHHHHHHHHHHH---hhhccccceeEEEEeC
Q 003364 667 --KTEDEVCRSLERVLLTMR-------ITTSEPKDVAFVVDGW-----ALEIALKHYRKAF---TELAILSRTAICCRVT 729 (826)
Q Consensus 667 --~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~g~-----~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~ 729 (826)
....+....+......+. -..-+.+.+++.+.-. ....+.....+.. +.+. +....-..++.
T Consensus 185 ~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~-v~~GkkVvEvr 263 (354)
T PLN02151 185 LCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLM-LTQGRKVLEIR 263 (354)
T ss_pred ccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcE-EecCCEEEEEe
Confidence 000000111112211111 1111233444443221 1222222222222 2122 22344556777
Q ss_pred cc---cHHHHHHHhhcC-C------CeEEEEcCCcccHHhHHhC-----CccEEecCCchHHHHh-hccccccchhcchh
Q 003364 730 PS---QKAQLVELLKSC-D------YRTLAIGDGGNDVRMIQKA-----DIGVGISGREGLQAAR-AADYSIGKFRFLKR 793 (826)
Q Consensus 730 p~---~K~~iv~~l~~~-~------~~v~~iGDg~ND~~ml~~A-----~vgIam~gn~~~~~~~-~Ad~v~~~~~~l~~ 793 (826)
|. +|+..++.+... + .-++++||...|-.||+.. |+||-+ |... +. .|+|.+.+-..+..
T Consensus 264 P~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-g~~~---k~T~A~y~L~dp~eV~~ 339 (354)
T PLN02151 264 PIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILV-SKYA---KETNASYSLQEPDEVME 339 (354)
T ss_pred CCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEe-ccCC---CCCcceEeCCCHHHHHH
Confidence 74 899999888753 1 2489999999999999864 677776 4321 22 68888877666555
Q ss_pred h
Q 003364 794 L 794 (826)
Q Consensus 794 l 794 (826)
+
T Consensus 340 ~ 340 (354)
T PLN02151 340 F 340 (354)
T ss_pred H
Confidence 3
No 138
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.40 E-value=0.011 Score=56.70 Aligned_cols=40 Identities=15% Similarity=0.270 Sum_probs=34.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCC-hhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDK-QNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~-~~~a~~~a~~~gi 652 (826)
.+.+++.++++.|++.|++++++|+.+ ...+..+++.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999988 5666677777775
No 139
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.39 E-value=0.0076 Score=60.82 Aligned_cols=120 Identities=17% Similarity=0.175 Sum_probs=77.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+++++|+++ ++++++|+-....+....+.+|+...-+. ++
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~--i~------------------------------ 143 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDD--IF------------------------------ 143 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCE--EE------------------------------
Confidence 5679999999999999 99999999999988888888887332110 00
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCccc--HHHHHHHh-hcCCCeEEEEcCCc-ccHHhHHhCCccE-
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KAQLVELL-KSCDYRTLAIGDGG-NDVRMIQKADIGV- 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~--K~~iv~~l-~~~~~~v~~iGDg~-ND~~ml~~A~vgI- 767 (826)
....+. ...|.. =..+++.+ +...+++++|||+. +|+.+=+.+|+..
T Consensus 144 ---------------------------~~~~~~-~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i 195 (224)
T TIGR02254 144 ---------------------------VSEDAG-IQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTC 195 (224)
T ss_pred ---------------------------EcCccC-CCCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEE
Confidence 000000 001221 13566666 65678899999998 8999999999743
Q ss_pred Eec-CCchHHHHhhccccccchhcchh
Q 003364 768 GIS-GREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 768 am~-gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
... +..+......+++++.+...|..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~el~~ 222 (224)
T TIGR02254 196 WMNPDMHPNPDDIIPTYEIRSLEELYE 222 (224)
T ss_pred EECCCCCCCCCCCCCceEECCHHHHHh
Confidence 331 21111111245666666555543
No 140
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.37 E-value=0.019 Score=53.51 Aligned_cols=27 Identities=30% Similarity=0.442 Sum_probs=24.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDK 639 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~ 639 (826)
++.|++.++++.|+++|++++++|+.+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 468999999999999999999999876
No 141
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.30 E-value=0.0082 Score=56.06 Aligned_cols=40 Identities=13% Similarity=0.016 Sum_probs=36.5
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
-.++|++.+.++.|+ .++++.++|+-+...+..+.+.+++
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 367999999999998 5799999999999999999988886
No 142
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.21 E-value=0.017 Score=57.25 Aligned_cols=39 Identities=8% Similarity=0.133 Sum_probs=32.4
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
.+-|++.++++.|+++|++++++|+-... +....+.+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 56799999999999999999999986653 4666777776
No 143
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.05 E-value=0.014 Score=52.99 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=33.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCC-ChhHHHHHHHHcC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGD-KQNTAIQIALSCN 651 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd-~~~~a~~~a~~~g 651 (826)
++.+++.+.++.|+++|++++++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 67899999999999999999999999 7777767666655
No 144
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.99 E-value=0.015 Score=54.74 Aligned_cols=38 Identities=13% Similarity=0.266 Sum_probs=33.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~ 650 (826)
...+++.++++.|+++|+++.++|+.....+....+..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 34589999999999999999999999998888777664
No 145
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.95 E-value=0.045 Score=56.00 Aligned_cols=42 Identities=7% Similarity=0.218 Sum_probs=33.6
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhH---HHHHHHHcCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNFI 653 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~---a~~~a~~~gi~ 653 (826)
.++-|++.+.++.+++.|++++++|+|+... +....+..|+.
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 3467999999999999999999999998543 34556667764
No 146
>PRK10444 UMP phosphatase; Provisional
Probab=95.82 E-value=0.15 Score=52.12 Aligned_cols=45 Identities=20% Similarity=0.266 Sum_probs=39.1
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~ 650 (826)
|.+.-.+.+-|++.++|+.|+++|++++++||++..+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 566666788999999999999999999999999998887777664
No 147
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.69 E-value=0.036 Score=55.29 Aligned_cols=100 Identities=15% Similarity=0.199 Sum_probs=66.7
Q ss_pred eccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcC---CCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccc
Q 003364 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN---FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRIT 686 (826)
Q Consensus 610 ~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (826)
++-++.|++.+++++|+++|+++.++|..+......+.+..+ +...
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------------------------------- 140 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------------------------------- 140 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh-------------------------------
Confidence 345788999999999999999999999998776666655542 2100
Q ss_pred cCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 687 TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 687 ~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
|... + ...+...-.|.-=..+++.++...++++++||...|+.+=+.||+-
T Consensus 141 --------------------------f~~~--f-d~~~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ 191 (220)
T TIGR01691 141 --------------------------FSGY--F-DTTVGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLH 191 (220)
T ss_pred --------------------------cceE--E-EeCcccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCE
Confidence 0000 0 0001100011111356777777788999999999999999999986
Q ss_pred EEe
Q 003364 767 VGI 769 (826)
Q Consensus 767 Iam 769 (826)
...
T Consensus 192 ti~ 194 (220)
T TIGR01691 192 TGQ 194 (220)
T ss_pred EEE
Confidence 533
No 148
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=95.67 E-value=0.045 Score=52.09 Aligned_cols=38 Identities=11% Similarity=0.167 Sum_probs=30.3
Q ss_pred CCchHHHHHHHHHcCCeEEEEcCCChh------------HHHHHHHHcCC
Q 003364 615 QDGVPETIETLRKAGINFWMLTGDKQN------------TAIQIALSCNF 652 (826)
Q Consensus 615 ~~~~~~aI~~l~~~Gi~v~i~TGd~~~------------~a~~~a~~~gi 652 (826)
-|++.++|++|+++|+++.++|..+.. .+..+.+.+|+
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl 93 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV 93 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 489999999999999999999976542 34556667775
No 149
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.58 E-value=0.058 Score=66.81 Aligned_cols=118 Identities=11% Similarity=0.043 Sum_probs=80.2
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC-CCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI-SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
+-|++.+.++.|+++|++++++|+.....+....+..|+. ...+. ++.
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~--iv~----------------------------- 210 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDA--IVS----------------------------- 210 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCE--EEE-----------------------------
Confidence 5699999999999999999999999999998888888873 11110 000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcc--cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE-Ee
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI 769 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI-am 769 (826)
. .. +.+.-|. -=..+++.++..++++++|||+.+|+.+-+.||+-. ++
T Consensus 211 ------~----------------------~~-~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v 261 (1057)
T PLN02919 211 ------A----------------------DA-FENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261 (1057)
T ss_pred ------C----------------------cc-cccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 0 00 0011121 113466667667889999999999999999999743 33
Q ss_pred -cCCchHHHHh-hccccccchhcc
Q 003364 770 -SGREGLQAAR-AADYSIGKFRFL 791 (826)
Q Consensus 770 -~gn~~~~~~~-~Ad~v~~~~~~l 791 (826)
.+....++.. .+++++.++..+
T Consensus 262 ~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 262 TTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CCCCCHHHHhhCCCCEEECChHHC
Confidence 2333344444 677888776554
No 150
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.40 E-value=0.083 Score=52.47 Aligned_cols=41 Identities=12% Similarity=0.248 Sum_probs=33.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhH---HHHHHHHcCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNFI 653 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~---a~~~a~~~gi~ 653 (826)
+.-|++.++++.++++|++|+++|||+... +..-.++.|+.
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 667899999999999999999999999765 44455566763
No 151
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.27 E-value=0.059 Score=49.50 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=67.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
+..|+.++-+..++++|+++.++|..+...+...+..+|+..
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f-------------------------------------- 87 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF-------------------------------------- 87 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce--------------------------------------
Confidence 477899999999999999999999999999999999999721
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH--HHHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK--AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K--~~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vg 766 (826)
++--.-|..+ .++++.++...++|+|+||.. .|+-.=+.+|+-
T Consensus 88 -------------------------------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 88 -------------------------------IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred -------------------------------eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 1112234433 367888888899999999985 588877777753
No 152
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.27 E-value=0.081 Score=50.72 Aligned_cols=156 Identities=23% Similarity=0.276 Sum_probs=77.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCC-CHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK-TEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.+-|++.++++.|++.=-.+++-| .-..-+..+|..+|+.-..-.+.-+.++.. ..++.. .+.+..+...
T Consensus 83 ~lvPgA~etm~~l~~~~tp~v~ST-SY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR---~E~L~~~~~~----- 153 (315)
T COG4030 83 KLVPGAEETMATLQERWTPVVIST-SYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEER---EELLSIIDVI----- 153 (315)
T ss_pred ccCCChHHHHHHHhccCCceEEec-cHHHHHHHHHHhcCCCccccccccccCccccCChHHH---HHHHHhcCcc-----
Confidence 456999999999988655555544 445567788888887433222222222211 111111 1111111100
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEE--E-eCcccHHHHHHHhhcC---CCeEEEEcCCcccHHhHHhCC-
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICC--R-VTPSQKAQLVELLKSC---DYRTLAIGDGGNDVRMIQKAD- 764 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~--~-~~p~~K~~iv~~l~~~---~~~v~~iGDg~ND~~ml~~A~- 764 (826)
-.++|+.+-..++ +.|..+....-..++- + +--..|+++++.+.+. ....+++||+..|+.||+.+.
T Consensus 154 ---~~~~geelfe~lD---e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rg 227 (315)
T COG4030 154 ---ASLSGEELFEKLD---ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARG 227 (315)
T ss_pred ---ccccHHHHHHHHH---HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhc
Confidence 0123332222121 1121110000000000 0 0113466777766553 345799999999999999973
Q ss_pred ---ccEEecCCchHHHHhhccccc
Q 003364 765 ---IGVGISGREGLQAARAADYSI 785 (826)
Q Consensus 765 ---vgIam~gn~~~~~~~~Ad~v~ 785 (826)
+.||..|| ..+.+-||+.+
T Consensus 228 rGglAvaFNGN--eYal~eAdVAv 249 (315)
T COG4030 228 RGGLAVAFNGN--EYALKEADVAV 249 (315)
T ss_pred cCceEEEecCC--cccccccceEE
Confidence 44555444 45666777755
No 153
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.10 E-value=0.047 Score=54.55 Aligned_cols=42 Identities=12% Similarity=0.208 Sum_probs=37.9
Q ss_pred ccCCchHHHHHHH--HHcCCeEEEEcCCChhHHHHHHHHcCCCC
Q 003364 613 RLQDGVPETIETL--RKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (826)
Q Consensus 613 ~l~~~~~~aI~~l--~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~ 654 (826)
|+.|+.+++++.+ +..|+.+.++|--+......+.+..|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 6789999999999 56899999999999999999999999854
No 154
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=94.92 E-value=0.054 Score=54.06 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=27.6
Q ss_pred HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
.+++.++..++++++|||...|+.+=+.||+-.
T Consensus 160 ~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 160 LMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 456666666788999999999999999999854
No 155
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=94.83 E-value=0.097 Score=51.64 Aligned_cols=35 Identities=6% Similarity=0.083 Sum_probs=28.9
Q ss_pred HHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEe
Q 003364 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
.+++.++..++++++|||+..|+.+=+.+|+....
T Consensus 149 ~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~ 183 (199)
T PRK09456 149 HVLQAEGFSAADAVFFDDNADNIEAANALGITSIL 183 (199)
T ss_pred HHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEE
Confidence 46666666788999999999999999999986533
No 156
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.72 E-value=0.094 Score=56.01 Aligned_cols=90 Identities=16% Similarity=0.118 Sum_probs=67.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHH----cCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS----CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTS 688 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (826)
++.+++.++|+.|+++|+++.++|..+...+..+.+. +++...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~--------------------------------- 77 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAED--------------------------------- 77 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHH---------------------------------
Confidence 3468899999999999999999999999999998877 554110
Q ss_pred CCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccH----HHHHHHhhcCCCeEEEEcCCcccHHhHHhCC
Q 003364 689 EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK----AQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764 (826)
Q Consensus 689 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K----~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~ 764 (826)
| ......++.| ..+++.++...+.+++|||+..|+.+.+.+.
T Consensus 78 ------------------------f----------~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 78 ------------------------F----------DARSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred ------------------------e----------eEEEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHC
Confidence 0 0011122334 3456666666789999999999999999988
Q ss_pred ccEEe
Q 003364 765 IGVGI 769 (826)
Q Consensus 765 vgIam 769 (826)
..|.+
T Consensus 124 p~~~~ 128 (320)
T TIGR01686 124 PVKTL 128 (320)
T ss_pred CCCcc
Confidence 77655
No 157
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=94.70 E-value=0.031 Score=56.23 Aligned_cols=115 Identities=8% Similarity=0.036 Sum_probs=73.2
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.++++.| ++++.++|+.+...+....+..|+......
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~---------------------------------- 130 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD---------------------------------- 130 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc----------------------------------
Confidence 4568999999998 499999999988888888888887332110
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEE-Ee---Cc--ccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RV---TP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~---~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
..+.+ ++ -| +-=..+++.+...++++++|||+.+|+.+=+.||+.
T Consensus 131 -----------------------------~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 131 -----------------------------KLFSGYDIQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred -----------------------------eEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 00011 01 11 111345666666678899999999999999999988
Q ss_pred EEecC--CchHHHHhhccccccchhcchh
Q 003364 767 VGISG--REGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 767 Iam~g--n~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
+.... .........++.+..++..|..
T Consensus 182 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 210 (221)
T PRK10563 182 VFYFCADPHNKPIDHPLVTTFTDLAQLPE 210 (221)
T ss_pred EEEECCCCCCcchhhhhhHHHHHHHHHHH
Confidence 75411 1111122234445555555554
No 158
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=94.62 E-value=0.2 Score=50.82 Aligned_cols=171 Identities=17% Similarity=0.152 Sum_probs=71.1
Q ss_pred ccCCchHHHHHHHHHcCC-eEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCH------HHHHHHHHHHHHHccc
Q 003364 613 RLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE------DEVCRSLERVLLTMRI 685 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi-~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 685 (826)
.+.+++.+++++|.+..- .|+|+|||+......+..--++.--..+|..+...+... .............+..
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 98 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNLPADEDLEWKDEVREILEY 98 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-TTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccccccccchHHHHHHHHHHHH
Confidence 567899999999987644 799999999988555432222211122233333322211 1111111111111111
Q ss_pred -------ccCCCCceEEEEcC-----h----hHHHHHHHHHHHHh---hhccccceeEEEEeCcc--cHHHHHHHhhcCC
Q 003364 686 -------TTSEPKDVAFVVDG-----W----ALEIALKHYRKAFT---ELAILSRTAICCRVTPS--QKAQLVELLKSCD 744 (826)
Q Consensus 686 -------~~~~~~~~~l~~~g-----~----~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~~ 744 (826)
..-+.+.+.+...- . ....+...+.+... .+.... ..-..++.|. .|+.+++.+....
T Consensus 99 ~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~-g~~~vEvrp~~~~KG~av~~ll~~~ 177 (235)
T PF02358_consen 99 FAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVP-GKKVVEVRPPGVNKGSAVRRLLEEL 177 (235)
T ss_dssp HHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE--SSEEEEE-TT--HHHHHHHHHTTS
T ss_pred HHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEE-CCCEEEEEeCCCChHHHHHHHHHhc
Confidence 00112233333221 1 12222222222221 222222 2223455554 6999999887642
Q ss_pred -------CeEEEEcCCcccHHhHHhC------CccEEecCCch-HHHHhhccccc
Q 003364 745 -------YRTLAIGDGGNDVRMIQKA------DIGVGISGREG-LQAARAADYSI 785 (826)
Q Consensus 745 -------~~v~~iGDg~ND~~ml~~A------~vgIam~gn~~-~~~~~~Ad~v~ 785 (826)
.-++++||...|-.||+.. +++|.+ +... .+....|+|-+
T Consensus 178 ~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V-~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 178 PFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKV-GSVSVGEKPTAASYRL 231 (235)
T ss_dssp ---------EEEEESSHHHHHHHHTTTTS----EEEEE-S---------------
T ss_pred CccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEE-Eeeccccccccccccc
Confidence 3699999999999999984 456666 4332 22223666654
No 159
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.61 E-value=0.12 Score=55.16 Aligned_cols=27 Identities=30% Similarity=0.410 Sum_probs=24.8
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGD 638 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd 638 (826)
-++.|++.++|++|+++|++++|+|+.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 367899999999999999999999984
No 160
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=94.42 E-value=0.27 Score=47.34 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=36.3
Q ss_pred ccCCchHHHHHHHHHcCC-eEEEEcCCChhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi-~v~i~TGd~~~~a~~~a~~~gi 652 (826)
|+.|+..++|+.+++.|. .++|+|--+......+.+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 678999999999999998 9999999999888888888886
No 161
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=94.40 E-value=0.42 Score=53.74 Aligned_cols=70 Identities=19% Similarity=0.272 Sum_probs=46.3
Q ss_pred cHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccEEecCCchHHHHhhccccccchhcchhheeecchhhHHHHHHH
Q 003364 732 QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFL 809 (826)
Q Consensus 732 ~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgIam~gn~~~~~~~~Ad~v~~~~~~l~~l~l~~gr~~~~~~~~~ 809 (826)
+|..-++..........+.||+.+|.|||+.|+.++++ +. ++ .. -+...+..+.+++-+||..+.-.-..
T Consensus 176 ~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V-~~-----~~-~~-~~~~~~~~~~~~fhdgrl~~~p~~~~ 245 (497)
T PLN02177 176 HKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMV-PR-----TK-CE-PLPRNKLLSPVIFHEGRLVQRPTPLV 245 (497)
T ss_pred HHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEe-CC-----CC-CC-cCCcccCCCceeeeCCcccCCCCHHH
Confidence 47766654322112238999999999999999999999 43 11 11 13344677777777799987765333
No 162
>PLN02645 phosphoglycolate phosphatase
Probab=93.97 E-value=0.2 Score=53.24 Aligned_cols=47 Identities=32% Similarity=0.489 Sum_probs=38.8
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHH---HHcCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA---LSCNF 652 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a---~~~gi 652 (826)
|.+.-.+.+-|++.++|++|+++|++++++|+++..+...++ +.+|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 555556777899999999999999999999999977766665 55676
No 163
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=93.95 E-value=0.11 Score=53.03 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=38.2
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHH--HHHHHcCCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI--QIALSCNFI 653 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~--~~a~~~gi~ 653 (826)
|.+.-...+-|++.++|++|+++|+++.++|+.+...+. ...+.+|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 445556678899999999999999999999997665444 566778874
No 164
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=93.36 E-value=0.19 Score=48.99 Aligned_cols=90 Identities=9% Similarity=0.084 Sum_probs=60.6
Q ss_pred hHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCceEEEE
Q 003364 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVV 697 (826)
Q Consensus 618 ~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 697 (826)
..+.+..|++. +++.++||.+...+....+..|+....+. ++
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~--i~----------------------------------- 133 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDA--VV----------------------------------- 133 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceE--EE-----------------------------------
Confidence 46899999875 89999999999999999999987332110 00
Q ss_pred cChhHHHHHHHHHHHHhhhccccceeEE-EEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 698 DGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 698 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
.. ..+. .+-.|.-=..+++.++...+.+++|||+.+|+.+=+.||+-.
T Consensus 134 ~~----------------------~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 134 AA----------------------DDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred eh----------------------hhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 00 0000 001111123456666666778999999999999999999754
No 165
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=92.95 E-value=1.1 Score=45.76 Aligned_cols=192 Identities=16% Similarity=0.075 Sum_probs=97.5
Q ss_pred CcEEEEEEeec--cccCCchHHHHHHHHHc-CCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEE-EecCCCH-----H-
Q 003364 601 DLKVLGVTAIE--DRLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL-SIDGKTE-----D- 670 (826)
Q Consensus 601 ~l~~lG~i~~~--d~l~~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~-~~~~~~~-----~- 670 (826)
|.++..++-.. ..+.++..+++++|... ..-++|+|||+.........-.|+---...|..+ ..+|... .
T Consensus 26 DGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~ 105 (266)
T COG1877 26 DGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEA 105 (266)
T ss_pred cccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHH
Confidence 44444444443 35778999999999887 4479999999999988877643432222233333 3333321 1
Q ss_pred ------HHHHHHHHHHHHcccccCCCCceEEEEcChhHHH---HHHHHHHH---H--hhhcc-ccceeEEEEeCcccHHH
Q 003364 671 ------EVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI---ALKHYRKA---F--TELAI-LSRTAICCRVTPSQKAQ 735 (826)
Q Consensus 671 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~---~~~~~~~~---~--~~~~~-~~~~~i~~~~~p~~K~~ 735 (826)
++...++...+...-..-+.+.+++...-...+. ........ . .++.. ..+..+-++.+-..|+.
T Consensus 106 ~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~ 185 (266)
T COG1877 106 DLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGA 185 (266)
T ss_pred HhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHH
Confidence 1222222222222111111223333322111111 11111100 0 01111 22344555555557999
Q ss_pred HHHHhhcC----CCeEEEEcCCcccHHhHHhCC----ccEEecCCchHHHHhhccccccchhcchh
Q 003364 736 LVELLKSC----DYRTLAIGDGGNDVRMIQKAD----IGVGISGREGLQAARAADYSIGKFRFLKR 793 (826)
Q Consensus 736 iv~~l~~~----~~~v~~iGDg~ND~~ml~~A~----vgIam~gn~~~~~~~~Ad~v~~~~~~l~~ 793 (826)
+++++... +.-+++.||...|-.||+..+ .+|-+ +-..++++..++.+-.....+..
T Consensus 186 a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v-~~~~t~a~~~~~~~~~~~~~l~~ 250 (266)
T COG1877 186 AIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKV-GVGSTQAKFRLAGVYGFLRSLYK 250 (266)
T ss_pred HHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEe-cCCcccccccccccHHHHHHHHH
Confidence 99976653 235899999999999999987 34444 44333344433333333344444
No 166
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=92.66 E-value=0.24 Score=48.10 Aligned_cols=93 Identities=8% Similarity=0.008 Sum_probs=63.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.+++.+++++|+ .+++++|+.+...+....+.+|+...-+. ++..
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~--i~~~---------------------------- 130 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDG--IFCF---------------------------- 130 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCe--EEEe----------------------------
Confidence 46789999999997 47999999999999999999987332110 0000
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEE---eCccc--HHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR---VTPSQ--KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~p~~--K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
.....+ .-|.. =..+++.++..++++++|||+..|+.+=+.||+..
T Consensus 131 -----------------------------~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 131 -----------------------------DTANPDYLLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred -----------------------------ecccCccCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 000000 12211 13566667767889999999999999999998754
No 167
>PHA02597 30.2 hypothetical protein; Provisional
Probab=92.52 E-value=0.45 Score=46.75 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=27.0
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
++-|++.+++++|++++ +.+++|..+........+.+++
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l 112 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNL 112 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCH
Confidence 46799999999999985 5667776554444434455554
No 168
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=92.33 E-value=0.28 Score=49.22 Aligned_cols=97 Identities=15% Similarity=0.158 Sum_probs=72.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCCc
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (826)
++.|++.+.++.|+++|+.++++|+.+...+..+....|+......
T Consensus 86 ~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~---------------------------------- 131 (221)
T COG0637 86 KPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDV---------------------------------- 131 (221)
T ss_pred CCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcch----------------------------------
Confidence 6789999999999999999999999999999999999998543211
Q ss_pred eEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCCCeEEEEcCCcccHHhHHhCCccE
Q 003364 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (826)
Q Consensus 693 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vgI 767 (826)
++++... .-.+-.|+-=....+.|+-.+.++++|.|+.+.+.+-+.||+-+
T Consensus 132 ---~v~~~dv---------------------~~~KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 132 ---IVTADDV---------------------ARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred ---hccHHHH---------------------hcCCCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 0000000 00011233334677777778899999999999999999999766
No 169
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=91.29 E-value=0.48 Score=47.70 Aligned_cols=40 Identities=18% Similarity=0.285 Sum_probs=30.7
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhH---HHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~---a~~~a~~~gi 652 (826)
+.-|++.+.++.+++.|++|+++|||+... +..-.++.|+
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~ 157 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGF 157 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCC
Confidence 445789999999999999999999998653 2333455564
No 170
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=91.28 E-value=0.79 Score=43.22 Aligned_cols=91 Identities=15% Similarity=0.126 Sum_probs=67.3
Q ss_pred ccccCCchHHHHHHHHHcCC--eEEEEcCC-------ChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHH
Q 003364 611 EDRLQDGVPETIETLRKAGI--NFWMLTGD-------KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLL 681 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi--~v~i~TGd-------~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (826)
++++.++..+.+++|++.+. +++++|.. ....|..+.+.+|+.-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------- 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------- 109 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE---------------------------
Confidence 56789999999999999987 49999987 3778889999999710
Q ss_pred HcccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcC-----CCeEEEEcCC-cc
Q 003364 682 TMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-----DYRTLAIGDG-GN 755 (826)
Q Consensus 682 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~-----~~~v~~iGDg-~N 755 (826)
..+...-|....+++++++.. .++++++||- ..
T Consensus 110 -----------------------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~T 148 (168)
T PF09419_consen 110 -----------------------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFT 148 (168)
T ss_pred -----------------------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHH
Confidence 011122454556777887654 7899999997 46
Q ss_pred cHHhHHhCC-ccEEe
Q 003364 756 DVRMIQKAD-IGVGI 769 (826)
Q Consensus 756 D~~ml~~A~-vgIam 769 (826)
|+-|=+..| .+|-+
T Consensus 149 DVl~gN~~G~~tilv 163 (168)
T PF09419_consen 149 DVLMGNRMGSYTILV 163 (168)
T ss_pred HHHHhhccCceEEEE
Confidence 888877777 55544
No 171
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=90.30 E-value=2.2 Score=39.70 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=30.5
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQ 645 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ 645 (826)
|..++++.+..++++++|++++-+|+|+...+..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~ 59 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANR 59 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHH
Confidence 6899999999999999999999999999765543
No 172
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=90.00 E-value=4.2 Score=49.05 Aligned_cols=150 Identities=12% Similarity=0.048 Sum_probs=77.9
Q ss_pred cCCchHHHHHHHHHc-CCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEe-cC-------C--CHH---HHHHHHHHH
Q 003364 614 LQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI-DG-------K--TED---EVCRSLERV 679 (826)
Q Consensus 614 l~~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~-~~-------~--~~~---~~~~~~~~~ 679 (826)
+.++..+++++|.+. +..|+|+|||+..........+++.--...|..+.. .+ . ... .+...++..
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~ 612 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYF 612 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHH
Confidence 567888999999765 778999999999998887755443211222222110 11 0 000 011112222
Q ss_pred HHHcccccCCCCceEEEEcCh----hHH-HHHHHHHHHH-h------hhccccceeEEEEeCcc--cHHHHHHHhhcC--
Q 003364 680 LLTMRITTSEPKDVAFVVDGW----ALE-IALKHYRKAF-T------ELAILSRTAICCRVTPS--QKAQLVELLKSC-- 743 (826)
Q Consensus 680 ~~~~~~~~~~~~~~~l~~~g~----~~~-~~~~~~~~~~-~------~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~-- 743 (826)
.+...-..-+.+...++..-. .+. ....+...++ . .+.. ....-..++.|. +|+.+++.+...
T Consensus 613 ~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v-~~Gk~vvEvrp~gvnKG~Av~~ll~~~~ 691 (797)
T PLN03063 613 TDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDV-VRGQKSVEVHAIGVTKGAAIGRILGEIV 691 (797)
T ss_pred HHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEE-EECCeEEEEEcCCCChHHHHHHHHHHhh
Confidence 222211112234444443221 111 1222222222 1 1111 223344566676 799888877542
Q ss_pred --------CCeEEEEcCCc-ccHHhHHhCC
Q 003364 744 --------DYRTLAIGDGG-NDVRMIQKAD 764 (826)
Q Consensus 744 --------~~~v~~iGDg~-ND~~ml~~A~ 764 (826)
.+-|+++||.. -|-.||+.-+
T Consensus 692 ~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~ 721 (797)
T PLN03063 692 HNKSMTTPIDFVFCSGYFLEKDEDVYTFFE 721 (797)
T ss_pred hccccCCCCCEEEEeCCCCCCcHHHHHhcc
Confidence 35799999975 4999998654
No 173
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=89.80 E-value=0.52 Score=48.56 Aligned_cols=48 Identities=23% Similarity=0.336 Sum_probs=38.0
Q ss_pred EEEeeccc----cCCchHHHHHHHHHcCCeEEEEcCCChhH---HHHHHHHcCCC
Q 003364 606 GVTAIEDR----LQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNFI 653 (826)
Q Consensus 606 G~i~~~d~----l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~---a~~~a~~~gi~ 653 (826)
|.+.-.+. +-|++.++|++|+++|++++++||++..+ ......++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 78899999999999999999999988776 45556667764
No 174
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=89.29 E-value=0.36 Score=43.15 Aligned_cols=33 Identities=12% Similarity=0.042 Sum_probs=28.7
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHH
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAI 644 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~ 644 (826)
+++.+++.+++++++++|+.++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 457789999999999999999999999987544
No 175
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=88.75 E-value=7.9 Score=47.01 Aligned_cols=150 Identities=13% Similarity=0.100 Sum_probs=77.7
Q ss_pred cCCchHHHHHHHHHc-CCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecC-CC-------HH-H----HHHHHHHH
Q 003364 614 LQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDG-KT-------ED-E----VCRSLERV 679 (826)
Q Consensus 614 l~~~~~~aI~~l~~~-Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~-~~-------~~-~----~~~~~~~~ 679 (826)
+.+++.++++.|.+. +..|+|+|||+..........+++.--...|..+...+ .. .+ + +...++..
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~ 702 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYF 702 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHH
Confidence 557788999999765 67899999999999888876654322222222221111 00 00 1 11111222
Q ss_pred HHHcccccCCCCceEEEEcCh----hHHHH-HHHHHHHH-h------hhccccceeEEEEeCcc--cHHHHHHHhhcC--
Q 003364 680 LLTMRITTSEPKDVAFVVDGW----ALEIA-LKHYRKAF-T------ELAILSRTAICCRVTPS--QKAQLVELLKSC-- 743 (826)
Q Consensus 680 ~~~~~~~~~~~~~~~l~~~g~----~~~~~-~~~~~~~~-~------~~~~~~~~~i~~~~~p~--~K~~iv~~l~~~-- 743 (826)
.+...-..-+.+...++..-. .+... .++...++ . .+.. ....-..++.|. +|+.+++.+...
T Consensus 703 ~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V-~~Gk~VVEVrP~gvnKG~Av~~ll~~~~ 781 (934)
T PLN03064 703 TERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDV-VQGSRSVEVRPVGVTKGAAIDRILGEIV 781 (934)
T ss_pred HhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEE-EeCCeEEEEEcCCCCHHHHHHHHHHhhh
Confidence 111111111233444443221 11111 22222222 1 1111 223334566666 799888877652
Q ss_pred --------CCeEEEEcCCcc-cHHhHHhCC
Q 003364 744 --------DYRTLAIGDGGN-DVRMIQKAD 764 (826)
Q Consensus 744 --------~~~v~~iGDg~N-D~~ml~~A~ 764 (826)
.+-|+++||... |-.||+.-.
T Consensus 782 ~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~ 811 (934)
T PLN03064 782 HSKSMTTPIDYVLCIGHFLGKDEDIYTFFE 811 (934)
T ss_pred hccccCCCCCEEEEeCCCCCCcHHHHHHHh
Confidence 366999999754 999998754
No 176
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=88.48 E-value=0.44 Score=41.02 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=35.4
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHH---HHcCCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA---LSCNFI 653 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a---~~~gi~ 653 (826)
|++...+++-|++.++|+.|+++|++++++|..+..+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 455556788899999999999999999999998766544443 566763
No 177
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=88.38 E-value=0.73 Score=47.27 Aligned_cols=42 Identities=7% Similarity=0.164 Sum_probs=38.6
Q ss_pred cC-CchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC
Q 003364 614 LQ-DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (826)
Q Consensus 614 l~-~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~ 655 (826)
+| |++.+++++|+++|++++++|+.+...+....+++|+...
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~Y 188 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRY 188 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcc
Confidence 45 9999999999999999999999999999999999999653
No 178
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=88.34 E-value=3.1 Score=42.62 Aligned_cols=46 Identities=22% Similarity=0.249 Sum_probs=38.7
Q ss_pred EEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc
Q 003364 605 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (826)
Q Consensus 605 lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~ 650 (826)
=|.+.--++.=|++.++|++|+++|++++++|..+..+...++.++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4777788889999999999999999999999999877776544443
No 179
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=88.20 E-value=1.2 Score=45.36 Aligned_cols=35 Identities=20% Similarity=0.107 Sum_probs=27.6
Q ss_pred HHHHHhhcCCCeEEEEcCC-cccHHhHHhCCccEEe
Q 003364 735 QLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGVGI 769 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgIam 769 (826)
.+++.++..++++++|||+ ..|+.+=+.||+-...
T Consensus 171 ~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 171 LAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 3455666667899999999 5999999999976544
No 180
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=87.12 E-value=0.69 Score=37.22 Aligned_cols=56 Identities=20% Similarity=0.290 Sum_probs=39.0
Q ss_pred HHHHHhhcCCCeEEEEcCC-cccHHhHHhCCccE-Ee-cCCch-HHHH---hhccccccchhc
Q 003364 735 QLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGV-GI-SGREG-LQAA---RAADYSIGKFRF 790 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgI-am-~gn~~-~~~~---~~Ad~v~~~~~~ 790 (826)
.+.+.+.....+++||||. ..|+.+=+.+|+.- .+ +|... +++. ..+|+|+.++..
T Consensus 12 ~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 12 QALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp HHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred HHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 4566666667889999999 99999999999744 33 23322 2332 378888877643
No 181
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=87.08 E-value=3 Score=43.51 Aligned_cols=48 Identities=23% Similarity=0.378 Sum_probs=35.5
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHH---HHHHcCCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQ---IALSCNFI 653 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~---~a~~~gi~ 653 (826)
|.+.-.+..-+++.++|++|+++|++++++||++..+... -.+.+|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3344456677789999999999999999999987554433 44556763
No 182
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=86.84 E-value=4.9 Score=38.42 Aligned_cols=26 Identities=23% Similarity=0.399 Sum_probs=23.6
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCC
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDK 639 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~ 639 (826)
+.+++.+|+.+++++|++++|+|.-+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs 57 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS 57 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC
Confidence 56999999999999999999999753
No 183
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=84.68 E-value=3.9 Score=41.05 Aligned_cols=42 Identities=12% Similarity=0.039 Sum_probs=36.3
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCC
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~ 654 (826)
-+..+++.+++++++.. ++++++|.-....+.....++|+..
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~ 139 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLD 139 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChh
Confidence 45778999999999999 9999999988888888999999743
No 184
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=84.60 E-value=2.1 Score=39.69 Aligned_cols=39 Identities=13% Similarity=0.259 Sum_probs=29.7
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHH----HHHHHHcCC
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTA----IQIALSCNF 652 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a----~~~a~~~gi 652 (826)
+++-+++.|..-+..|-++..+|||....+ ..+|+...|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i 157 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc
Confidence 456778899999999999999999987543 444555555
No 185
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=84.28 E-value=4.5 Score=41.18 Aligned_cols=30 Identities=13% Similarity=0.199 Sum_probs=26.4
Q ss_pred cccCCchHHHHHHHHHcCCeEEEEcCCChh
Q 003364 612 DRLQDGVPETIETLRKAGINFWMLTGDKQN 641 (826)
Q Consensus 612 d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~ 641 (826)
.|.-|++.+..+.+++.|++|+++|||...
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 355679999999999999999999999854
No 186
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=84.10 E-value=13 Score=45.61 Aligned_cols=49 Identities=18% Similarity=0.250 Sum_probs=36.9
Q ss_pred eEEEEeCcc--cHHHHHHHhhcC----CCeE-EEEcCCcc-cHH-hHHhCCccEEecC
Q 003364 723 AICCRVTPS--QKAQLVELLKSC----DYRT-LAIGDGGN-DVR-MIQKADIGVGISG 771 (826)
Q Consensus 723 ~i~~~~~p~--~K~~iv~~l~~~----~~~v-~~iGDg~N-D~~-ml~~A~vgIam~g 771 (826)
.-+.++-|. .|+..+++|... .++| +++||+-| |.+ ||.--+-+|-+.|
T Consensus 945 ~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 945 GTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred CcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 467788887 699999998763 3455 66999999 955 6666677887744
No 187
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=82.92 E-value=2 Score=44.21 Aligned_cols=41 Identities=7% Similarity=0.115 Sum_probs=37.1
Q ss_pred CCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC
Q 003364 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (826)
Q Consensus 615 ~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~ 655 (826)
.|++.++|++|+++|+++.++|+.+...+.......|+...
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y 190 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY 190 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc
Confidence 38999999999999999999998888888999999999643
No 188
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=82.48 E-value=3.6 Score=46.68 Aligned_cols=27 Identities=19% Similarity=0.437 Sum_probs=24.5
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCCh
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQ 640 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~ 640 (826)
+-|++.++|++|+++|++++|+|.-+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 469999999999999999999998655
No 189
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=82.05 E-value=1.3 Score=45.57 Aligned_cols=60 Identities=15% Similarity=0.175 Sum_probs=39.8
Q ss_pred HHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCccE-Ee-cCC-chHHH---Hhhccccccchhcchhh
Q 003364 735 QLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGV-GI-SGR-EGLQA---ARAADYSIGKFRFLKRL 794 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgI-am-~gn-~~~~~---~~~Ad~v~~~~~~l~~l 794 (826)
.+++.++...++++||||+. +|+.+=+.+|+-- .+ .|. ...+. ...+|+++.++..+..+
T Consensus 187 ~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~ 253 (257)
T TIGR01458 187 EALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDL 253 (257)
T ss_pred HHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHH
Confidence 45566666678999999996 9999999999744 33 232 11212 12467888777666553
No 190
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=81.57 E-value=1.3 Score=41.83 Aligned_cols=43 Identities=14% Similarity=0.015 Sum_probs=37.9
Q ss_pred eeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCC
Q 003364 609 AIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 609 ~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
.+.=..||++.+.++.|.+. +.+++.|.-....|..+...++.
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 34446899999999999987 99999999999999999988875
No 191
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=81.05 E-value=9.2 Score=40.80 Aligned_cols=38 Identities=13% Similarity=0.175 Sum_probs=35.1
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHc-C
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC-N 651 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~-g 651 (826)
..|++.+++++|+++|+++.++|+-+...+..+.+.+ |
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 3689999999999999999999999999999999886 5
No 192
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=80.28 E-value=1.6 Score=41.79 Aligned_cols=33 Identities=9% Similarity=0.012 Sum_probs=27.5
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
++.|++.++++ +++++|+-+........+..|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l 122 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGL 122 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCC
Confidence 47789999998 3789999888888888888887
No 193
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=76.79 E-value=15 Score=36.44 Aligned_cols=40 Identities=15% Similarity=0.186 Sum_probs=32.3
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhH----HHHHHHHcCCC
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNT----AIQIALSCNFI 653 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~----a~~~a~~~gi~ 653 (826)
.-|++.+.++..-++|..|+.+|.|.... ++.-.++.|+.
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~ 166 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLP 166 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcc
Confidence 45899999999999999999999998765 34455566663
No 194
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=75.30 E-value=13 Score=37.31 Aligned_cols=43 Identities=19% Similarity=0.358 Sum_probs=33.3
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~ 655 (826)
.+|+++.+.++.|++.+|.+.|.|+-=......+.++.|...+
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~ 132 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHP 132 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BT
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCC
Confidence 5899999999999999999999999888888888888776554
No 195
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=73.49 E-value=13 Score=42.40 Aligned_cols=178 Identities=11% Similarity=0.059 Sum_probs=116.2
Q ss_pred CCccccccCCCceEEeecccccccccHHHHHHhhhHHHHHHHHHHHHhhccCccccCcccchhhhhhhhhhhhhHHHHHH
Q 003364 9 DDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDD 88 (826)
Q Consensus 9 ~~~~r~~~~g~N~i~~~~~~~~~~l~~~l~~~~~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~ 88 (826)
++++|-..+--+......+++..+++..-++.|.+.+++++.+..++-.+..-....++..|..++++..+-..++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666667788888888999999999999999998888776665555666678888888888888999999
Q ss_pred HHhhhhhHhh-cc----e-----EEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEeccCCCceE----E--E-
Q 003364 89 YNRYLSDKKA-NE----K-----EVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVC----Y--V- 151 (826)
Q Consensus 89 ~~~~~~~~~~-~~----~-----~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s~~~~G~~----~--V- 151 (826)
++|.+..... .. . +..-+.-|..+.+...+=+|-|.|.|+.-|.-- -..+.++..+|+. . |
T Consensus 154 ~~rd~~~Nse~y~~ltr~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg--~~FiRTDQLDGETDWKLrl~vp 231 (1051)
T KOG0210|consen 154 RRRDRELNSEKYTKLTRDGTRREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSG--SCFIRTDQLDGETDWKLRLPVP 231 (1051)
T ss_pred HHhhhhhhhhhheeeccCCcccccccccccccEEEEecCCcCCcceEEEEccCCCC--ceEEeccccCCcccceeeccch
Confidence 9986643221 11 1 122245577888888999999999999766431 1233333323331 1 1
Q ss_pred EcCCCCCCCCceeeeccccccCCCHhhhccceEEEEccCC
Q 003364 152 ETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGP 191 (826)
Q Consensus 152 des~lTGEs~p~~K~~~~~~~~~~~~~~~~~~~~i~~~~~ 191 (826)
-+..+|-++....-. ...+.+...++.+.|++.....
T Consensus 232 ~tQ~l~~~~el~~i~---v~Ae~P~kdIh~F~Gt~~~~d~ 268 (1051)
T KOG0210|consen 232 RTQHLTEDSELMEIS---VYAEKPQKDIHSFVGTFTITDS 268 (1051)
T ss_pred hhccCCcccchheEE---EeccCcchhhHhhEEEEEEecC
Confidence 144455554443221 2233345567788777765443
No 196
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=68.89 E-value=7.7 Score=40.45 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=27.0
Q ss_pred HHHHHhhcCCCeEEEEcCC-cccHHhHHhCCccE
Q 003364 735 QLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGV 767 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgI 767 (826)
.+++.++...++++||||. ..|+.+=+.||+--
T Consensus 210 ~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~s 243 (279)
T TIGR01452 210 CITENFSIDPARTLMVGDRLETDILFGHRCGMTT 243 (279)
T ss_pred HHHHHhCCChhhEEEECCChHHHHHHHHHcCCcE
Confidence 4566666667899999999 59999999999754
No 197
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=67.53 E-value=18 Score=32.28 Aligned_cols=81 Identities=19% Similarity=0.294 Sum_probs=59.0
Q ss_pred HHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHc
Q 003364 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (826)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~ 628 (826)
-+...|++|+.++-. .+.+++.+ .-.+.+-.++++-+......+.+++.+++|+++
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e~~~~-----------------------~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPEEIVE-----------------------AAIQEDVDVIGLSSLSGGHMTLFPEVIELLREL 77 (122)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH-----------------------HHHHcCCCEEEEcccchhhHHHHHHHHHHHHhc
Confidence 457789999988743 44433322 223467778888888888888999999999999
Q ss_pred CC-e-EEEEcCCChhHHHHHHHHcCCC
Q 003364 629 GI-N-FWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 629 Gi-~-v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
|. + .+++-|+.+..-...+++.|+.
T Consensus 78 ~~~~i~i~~GG~~~~~~~~~~~~~G~d 104 (122)
T cd02071 78 GAGDILVVGGGIIPPEDYELLKEMGVA 104 (122)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHCCCC
Confidence 77 3 4677777776667778889973
No 198
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=66.67 E-value=33 Score=32.55 Aligned_cols=41 Identities=20% Similarity=0.302 Sum_probs=31.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEc-CCChhHHHHHHHHcCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLT-GDKQNTAIQIALSCNFI 653 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~T-Gd~~~~a~~~a~~~gi~ 653 (826)
.+-|++.++|+.|++.|+++.+|| -+.+.-|..+.+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 467999999999999999999999 57788999999999985
No 199
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=63.73 E-value=7.3 Score=38.23 Aligned_cols=48 Identities=25% Similarity=0.335 Sum_probs=37.9
Q ss_pred eeEEEEeCcc--cHHHHHHHhhcC-CCeEEEEcC----CcccHHhHHhCCc-cEEe
Q 003364 722 TAICCRVTPS--QKAQLVELLKSC-DYRTLAIGD----GGNDVRMIQKADI-GVGI 769 (826)
Q Consensus 722 ~~i~~~~~p~--~K~~iv~~l~~~-~~~v~~iGD----g~ND~~ml~~A~v-gIam 769 (826)
..+-.+++|. +|...+++|... -+++..||| |-||.|.+...++ |+++
T Consensus 150 GqiSiDvfp~GwDKty~Lr~l~~~~~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V 205 (220)
T PF03332_consen 150 GQISIDVFPKGWDKTYCLRHLEDEGFDEIHFFGDKTFPGGNDYEIFEDPRTIGHTV 205 (220)
T ss_dssp TTTEEEEEETT-SGGGGGGGTTTTT-SEEEEEESS-STTSTTHHHHHSTTSEEEE-
T ss_pred CceEEccccCCccHHHHHHHHHhcccceEEEEehhccCCCCCceeeecCCccEEEe
Confidence 3455788887 799999998774 578999999 7899999998764 8888
No 200
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=63.04 E-value=16 Score=35.32 Aligned_cols=52 Identities=21% Similarity=0.310 Sum_probs=41.8
Q ss_pred cEEEEEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHH---HHHcCCC
Q 003364 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQI---ALSCNFI 653 (826)
Q Consensus 602 l~~lG~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~---a~~~gi~ 653 (826)
+.+-|.+-+++..-|++.+|++.|+.++.+|-.+|.-...+-..+ ...+|+.
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 346799999999999999999999999999999987766554444 4556653
No 201
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=61.48 E-value=92 Score=28.41 Aligned_cols=80 Identities=14% Similarity=0.188 Sum_probs=58.1
Q ss_pred HHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHc
Q 003364 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (826)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~ 628 (826)
-+...|++|+.++.. .+.+++.+ .-.+.+-.++|+-.+...-.+..++.+++|+++
T Consensus 26 ~lr~~G~eVi~LG~~-vp~e~i~~-----------------------~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 26 ALTEAGFEVINLGVM-TSQEEFID-----------------------AAIETDADAILVSSLYGHGEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH-----------------------HHHHcCCCEEEEcCccccCHHHHHHHHHHHHhc
Confidence 456789999998843 33333322 223467889999988888899999999999999
Q ss_pred CC--eEEEEcCCC------hhHHHHHHHHcCC
Q 003364 629 GI--NFWMLTGDK------QNTAIQIALSCNF 652 (826)
Q Consensus 629 Gi--~v~i~TGd~------~~~a~~~a~~~gi 652 (826)
|. ..+++-|.. +......++++|+
T Consensus 82 ~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~ 113 (137)
T PRK02261 82 GLGDILLYVGGNLVVGKHDFEEVEKKFKEMGF 113 (137)
T ss_pred CCCCCeEEEECCCCCCccChHHHHHHHHHcCC
Confidence 55 246677765 4556678889986
No 202
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=61.34 E-value=29 Score=30.66 Aligned_cols=81 Identities=19% Similarity=0.230 Sum_probs=58.6
Q ss_pred HHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHc
Q 003364 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (826)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~ 628 (826)
-+...|++|+.+. ..++.+++.+. -.+.+-.++|+-+...+--+.+++.++.+++.
T Consensus 22 ~l~~~G~~V~~lg-~~~~~~~l~~~-----------------------~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~ 77 (119)
T cd02067 22 ALRDAGFEVIDLG-VDVPPEEIVEA-----------------------AKEEDADAIGLSGLLTTHMTLMKEVIEELKEA 77 (119)
T ss_pred HHHHCCCEEEECC-CCCCHHHHHHH-----------------------HHHcCCCEEEEeccccccHHHHHHHHHHHHHc
Confidence 4567899998776 33555544321 22357778888888777778999999999999
Q ss_pred CC--eEEEEcCCChhHHHHHHHHcCCC
Q 003364 629 GI--NFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 629 Gi--~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
+- ..+++-|.....-...+++.|.+
T Consensus 78 ~~~~~~i~vGG~~~~~~~~~~~~~G~D 104 (119)
T cd02067 78 GLDDIPVLVGGAIVTRDFKFLKEIGVD 104 (119)
T ss_pred CCCCCeEEEECCCCChhHHHHHHcCCe
Confidence 76 45788888766655678888863
No 203
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=58.84 E-value=17 Score=36.81 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=37.0
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEc---CCChhHHHHHHHH-cCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALS-CNF 652 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~T---Gd~~~~a~~~a~~-~gi 652 (826)
|++.-.+.+-+++.++|+.++++|++++++| |++.........+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 4444456667799999999999999999998 7777777665566 676
No 204
>PTZ00445 p36-lilke protein; Provisional
Probab=55.43 E-value=21 Score=34.94 Aligned_cols=32 Identities=19% Similarity=0.068 Sum_probs=26.6
Q ss_pred HHHHHhhcCCCeEEEEcCCcccHHhHHhCCcc
Q 003364 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~ND~~ml~~A~vg 766 (826)
++++..+...++++.|=|....+.+-+..|+-
T Consensus 169 ~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ 200 (219)
T PTZ00445 169 QVCSDFNVNPDEILFIDDDMNNCKNALKEGYI 200 (219)
T ss_pred HHHHHcCCCHHHeEeecCCHHHHHHHHHCCCE
Confidence 46666666789999999999999999988763
No 205
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=54.48 E-value=45 Score=33.20 Aligned_cols=101 Identities=14% Similarity=0.078 Sum_probs=63.8
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcC-CCCCCCCCcEEEecCCCHHHHHHHHHHHHHHcccccCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN-FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~g-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (826)
.+.||+.+.++.|+..|+.+.++|+.+..++..-....+ +...... .+..++.+..
T Consensus 92 ~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~--~v~~d~~~v~--------------------- 148 (222)
T KOG2914|consen 92 ILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSH--VVLGDDPEVK--------------------- 148 (222)
T ss_pred ccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCC--CeecCCcccc---------------------
Confidence 355799999999999999999999997776654444333 2111000 0000000000
Q ss_pred ceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcCC-CeEEEEcCCcccHHhHHhCCccEEe
Q 003364 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCD-YRTLAIGDGGNDVRMIQKADIGVGI 769 (826)
Q Consensus 692 ~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~ml~~A~vgIam 769 (826)
...-.|.-=....+.++..+ +.+++|.|+.+=+.|-+.||.=+-|
T Consensus 149 ---------------------------------~gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~ 194 (222)
T KOG2914|consen 149 ---------------------------------NGKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVG 194 (222)
T ss_pred ---------------------------------CCCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEE
Confidence 00111111234566666666 8999999999999999999987755
No 206
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=53.97 E-value=11 Score=38.37 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=24.9
Q ss_pred HHHHHhhcC-CCeEEEEcCC-cccHHhHHhCCccE
Q 003364 735 QLVELLKSC-DYRTLAIGDG-GNDVRMIQKADIGV 767 (826)
Q Consensus 735 ~iv~~l~~~-~~~v~~iGDg-~ND~~ml~~A~vgI 767 (826)
.+++.+... .++++||||+ .+|+.+=+.||+-.
T Consensus 203 ~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 203 KALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 345555433 4689999999 69999999998754
No 207
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=50.56 E-value=53 Score=33.00 Aligned_cols=44 Identities=16% Similarity=-0.005 Sum_probs=32.5
Q ss_pred HHHHHhhcCCCeEEEEcCC-cccHHhHHhCCccEEecCCchHHHH
Q 003364 735 QLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGVGISGREGLQAA 778 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg-~ND~~ml~~A~vgIam~gn~~~~~~ 778 (826)
.+++.++..+++++++||. .||+..=+.+|.--....|.....+
T Consensus 176 ~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~ 220 (237)
T KOG3085|consen 176 LALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALK 220 (237)
T ss_pred HHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhh
Confidence 4677777789999999995 8999999999964434355444333
No 208
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=45.88 E-value=44 Score=32.69 Aligned_cols=79 Identities=18% Similarity=0.135 Sum_probs=58.3
Q ss_pred HHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHc
Q 003364 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (826)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~ 628 (826)
-+...|++|+.++ ...+.+++.+. -.+.+-.++|+-.....-.+..++.++.++++
T Consensus 107 ~l~~~G~~vi~LG-~~vp~e~~v~~-----------------------~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~ 162 (197)
T TIGR02370 107 MLRANGFDVIDLG-RDVPIDTVVEK-----------------------VKKEKPLMLTGSALMTTTMYGQKDINDKLKEE 162 (197)
T ss_pred HHHhCCcEEEECC-CCCCHHHHHHH-----------------------HHHcCCCEEEEccccccCHHHHHHHHHHHHHc
Confidence 4567899999887 34444443321 22367789999998888889999999999999
Q ss_pred CCe---EEEEcCCChhHHHHHHHHcCCC
Q 003364 629 GIN---FWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 629 Gi~---v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
|.+ .+++-|+... ..+++++|-+
T Consensus 163 ~~~~~v~i~vGG~~~~--~~~~~~~gad 188 (197)
T TIGR02370 163 GYRDSVKFMVGGAPVT--QDWADKIGAD 188 (197)
T ss_pred CCCCCCEEEEEChhcC--HHHHHHhCCc
Confidence 874 5778887763 4578888864
No 209
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=44.64 E-value=1.9e+02 Score=26.20 Aligned_cols=80 Identities=11% Similarity=0.178 Sum_probs=55.7
Q ss_pred HHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHc
Q 003364 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (826)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~ 628 (826)
-+...|++|+-+.... +.+++-+ ...+.+-.++|+-++.-.--+..++.++.|+++
T Consensus 24 ~l~~~GfeVi~LG~~v-~~e~~v~-----------------------aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~ 79 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLS-PQEEFIK-----------------------AAIETKADAILVSSLYGHGEIDCKGLRQKCDEA 79 (134)
T ss_pred HHHHCCCEEEECCCCC-CHHHHHH-----------------------HHHHcCCCEEEEecccccCHHHHHHHHHHHHHC
Confidence 4567899999888543 2222221 233468889999888887778899999999999
Q ss_pred CC--eEEEEcCCCh---h---HHHHHHHHcCC
Q 003364 629 GI--NFWMLTGDKQ---N---TAIQIALSCNF 652 (826)
Q Consensus 629 Gi--~v~i~TGd~~---~---~a~~~a~~~gi 652 (826)
|. ..+++-|-.. . ....-++++|+
T Consensus 80 gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 80 GLEGILLYVGGNLVVGKQDFPDVEKRFKEMGF 111 (134)
T ss_pred CCCCCEEEecCCcCcChhhhHHHHHHHHHcCC
Confidence 87 5677888531 1 12455788996
No 210
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=43.38 E-value=70 Score=34.08 Aligned_cols=47 Identities=19% Similarity=0.276 Sum_probs=36.8
Q ss_pred EEEeeccccCCchHHHHHHHHHc----CCeEEEEcCCC---hhH-HHHHHHHcCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKA----GINFWMLTGDK---QNT-AIQIALSCNF 652 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~----Gi~v~i~TGd~---~~~-a~~~a~~~gi 652 (826)
|++.-.+++-+++.++++.|+.. |+++.++|... ... +..+.+.+|+
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~ 63 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGV 63 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCC
Confidence 66777788899999999999999 99999998665 343 3444577776
No 211
>PLN02645 phosphoglycolate phosphatase
Probab=41.93 E-value=36 Score=36.12 Aligned_cols=59 Identities=15% Similarity=0.085 Sum_probs=39.6
Q ss_pred HHHHHhhcCCCeEEEEcCCc-ccHHhHHhCCccE-Ee-cCCc-hHHHHh-----hccccccchhcchh
Q 003364 735 QLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGV-GI-SGRE-GLQAAR-----AADYSIGKFRFLKR 793 (826)
Q Consensus 735 ~iv~~l~~~~~~v~~iGDg~-ND~~ml~~A~vgI-am-~gn~-~~~~~~-----~Ad~v~~~~~~l~~ 793 (826)
.+++.++...++++||||.. +|+.+=+.||+.- .+ +|.. .+++.. .+|+++.+...|..
T Consensus 238 ~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~ 305 (311)
T PLN02645 238 YLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLT 305 (311)
T ss_pred HHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHH
Confidence 35566666678999999997 9999999999643 22 2322 233322 46888877766644
No 212
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=41.47 E-value=89 Score=28.28 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=58.7
Q ss_pred HHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHH
Q 003364 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (826)
Q Consensus 548 ~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~ 627 (826)
.-+...|+.|+-.... .+.+++-+ ...+.+-..+|+-++...-.+..++.++.|++
T Consensus 24 ~~l~~~GfeVi~lg~~-~s~e~~v~-----------------------aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~ 79 (132)
T TIGR00640 24 TAYADLGFDVDVGPLF-QTPEEIAR-----------------------QAVEADVHVVGVSSLAGGHLTLVPALRKELDK 79 (132)
T ss_pred HHHHhCCcEEEECCCC-CCHHHHHH-----------------------HHHHcCCCEEEEcCchhhhHHHHHHHHHHHHh
Confidence 3466789999887743 23333221 23457889999999998888999999999999
Q ss_pred cCC-e-EEEEcCCChhHHHHHHHHcCCC
Q 003364 628 AGI-N-FWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 628 ~Gi-~-v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
+|. . .+++-|-.+..-....+++|+.
T Consensus 80 ~g~~~i~vivGG~~~~~~~~~l~~~Gvd 107 (132)
T TIGR00640 80 LGRPDILVVVGGVIPPQDFDELKEMGVA 107 (132)
T ss_pred cCCCCCEEEEeCCCChHhHHHHHHCCCC
Confidence 986 3 4566655555556678889974
No 213
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=40.73 E-value=60 Score=40.41 Aligned_cols=63 Identities=11% Similarity=0.118 Sum_probs=40.1
Q ss_pred ccchhhhhhhhhhhhhHHHHHHHHhhh---hh-H----hh-cceEEEE----EeCCeEEEEEeecCccccEEEeeC
Q 003364 67 ASTWGPLIFIFAVSATKEAWDDYNRYL---SD-K----KA-NEKEVWV----VKQGIKKLIQSQDIRVGNIVWLRE 129 (826)
Q Consensus 67 ~~~~~~l~~i~~~~~~~~~~~~~~~~~---~~-~----~~-~~~~~~V----~r~g~~~~i~~~~l~~GDII~l~~ 129 (826)
...++++++..+++.+.++.+++...+ .. . -+ +.+...+ +.-|....+...+.+|.|.+.++.
T Consensus 132 ~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 132 VAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc
Confidence 334556666677778888877775321 11 1 11 2222223 357889999999999999999853
No 214
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=40.30 E-value=24 Score=34.33 Aligned_cols=29 Identities=21% Similarity=0.323 Sum_probs=23.9
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChh
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQN 641 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~ 641 (826)
++-|++.+++++|.+.|..++++|+++..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 56689999999999999999999999865
No 215
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=39.81 E-value=50 Score=30.90 Aligned_cols=43 Identities=16% Similarity=0.022 Sum_probs=37.9
Q ss_pred eccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCC
Q 003364 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 610 ~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~ 653 (826)
..-.++|++.+.+++|++. +++++.|.-+...|..+++.++..
T Consensus 55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 3446899999999999955 999999999999999999998864
No 216
>PF15584 Imm44: Immunity protein 44
Probab=39.26 E-value=13 Score=30.49 Aligned_cols=20 Identities=20% Similarity=0.366 Sum_probs=15.9
Q ss_pred cccEEEeeCCCcccCcEEEE
Q 003364 121 VGNIVWLRENDEVPCDLVLI 140 (826)
Q Consensus 121 ~GDII~l~~G~~iPaD~ill 140 (826)
+.+-..|+.|++||||||-=
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 34556789999999999864
No 217
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=39.08 E-value=17 Score=29.65 Aligned_cols=27 Identities=33% Similarity=0.602 Sum_probs=18.1
Q ss_pred EEeecCccccEEEe-eCCCcccCcEEEE
Q 003364 114 IQSQDIRVGNIVWL-RENDEVPCDLVLI 140 (826)
Q Consensus 114 i~~~~l~~GDII~l-~~G~~iPaD~ill 140 (826)
+.-.+|.+||.|.+ +.||.||-=.-++
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I~~vv 72 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKIVGVV 72 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEEEEE-
T ss_pred HHHcCCCCCCEEEEEECCCccceEeEee
Confidence 33478999999988 6899999644443
No 218
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=38.69 E-value=41 Score=33.08 Aligned_cols=84 Identities=18% Similarity=0.179 Sum_probs=60.1
Q ss_pred HHHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHH
Q 003364 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (826)
Q Consensus 548 ~~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~ 627 (826)
.-+...|++|+-++ +..+.++|-+- .-|..-.++++-++...--++-++.+++|++
T Consensus 126 ~ml~~aGfevidLG-~dvP~e~fve~-----------------------a~e~k~d~v~~SalMTttm~~~~~viE~L~e 181 (227)
T COG5012 126 TMLEAAGFEVIDLG-RDVPVEEFVEK-----------------------AKELKPDLVSMSALMTTTMIGMKDVIELLKE 181 (227)
T ss_pred HHHHhCCcEEEecC-CCCCHHHHHHH-----------------------HHHcCCcEEechHHHHHHHHHHHHHHHHHHH
Confidence 34567899999888 34444444321 1234577888888888888889999999999
Q ss_pred cCCeEEEEcC-CChhHHHHHHHHcCCCCC
Q 003364 628 AGINFWMLTG-DKQNTAIQIALSCNFISP 655 (826)
Q Consensus 628 ~Gi~v~i~TG-d~~~~a~~~a~~~gi~~~ 655 (826)
.|+|--+++| -........++++|-+..
T Consensus 182 eGiRd~v~v~vGGApvtq~~a~~iGAD~~ 210 (227)
T COG5012 182 EGIRDKVIVMVGGAPVTQDWADKIGADAY 210 (227)
T ss_pred cCCccCeEEeecCccccHHHHHHhCCCcc
Confidence 9998666666 444466788899887543
No 219
>PRK11507 ribosome-associated protein; Provisional
Probab=38.43 E-value=32 Score=27.08 Aligned_cols=26 Identities=19% Similarity=0.114 Sum_probs=22.1
Q ss_pred EEEeCCeEEEEEeecCccccEEEeeC
Q 003364 104 WVVKQGIKKLIQSQDIRVGNIVWLRE 129 (826)
Q Consensus 104 ~V~r~g~~~~i~~~~l~~GDII~l~~ 129 (826)
.|..||+...-.-..|.+||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 46678998888899999999998754
No 220
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=36.02 E-value=18 Score=34.95 Aligned_cols=21 Identities=10% Similarity=0.262 Sum_probs=15.0
Q ss_pred HHHHHHHHHHcCCeEEEEEEE
Q 003364 543 FVEAVEQYSQLGLRTLCLAWR 563 (826)
Q Consensus 543 ~~~~~~~~~~~G~rvl~~A~k 563 (826)
..+.++.+..+|.++..++-.
T Consensus 94 ~~e~i~~~~~~~~~v~IvS~~ 114 (192)
T PF12710_consen 94 AMELIRELKDNGIKVVIVSGS 114 (192)
T ss_dssp HHHHHHHHHHTTSEEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEECCC
Confidence 346667777888888887754
No 221
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=35.87 E-value=17 Score=28.13 Aligned_cols=26 Identities=19% Similarity=0.381 Sum_probs=14.1
Q ss_pred EEeCCeEEEEEeecCccccEEEeeCCC
Q 003364 105 VVKQGIKKLIQSQDIRVGNIVWLREND 131 (826)
Q Consensus 105 V~r~g~~~~i~~~~l~~GDII~l~~G~ 131 (826)
|..||+...-....|.+||+|.+ .|.
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~-~~~ 60 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEI-DGE 60 (65)
T ss_dssp HEETTB----SS----SSEEEEE-TTE
T ss_pred eEECCEEccccCCcCCCCCEEEE-CCE
Confidence 56688888888899999999998 443
No 222
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=35.42 E-value=63 Score=28.48 Aligned_cols=37 Identities=11% Similarity=0.201 Sum_probs=29.2
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCC
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi 652 (826)
-.+++.++++.+++.|++++.+|++.. ..+.+.+.|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 356888999999999999999998774 4456665553
No 223
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=34.70 E-value=2.2e+02 Score=36.06 Aligned_cols=66 Identities=20% Similarity=0.198 Sum_probs=50.0
Q ss_pred cchhhhhhhhhhhhhHHHHHHHHhhhhhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEe
Q 003364 68 STWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIG 141 (826)
Q Consensus 68 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~ 141 (826)
.+|...++++++..+...+..++++++.+++..... ......| ++-|....+...|.+|-|.+++.
T Consensus 191 ~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~----~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~ 256 (1054)
T TIGR01657 191 EYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH----KPQSVIV----IRNGKWVTIASDELVPGDIVSIP 256 (1054)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCeeEEE----EECCEEEEEEcccCCCCCEEEEe
Confidence 446677888888888888888888888888876432 2223333 24588999999999999999996
No 224
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=34.50 E-value=1.5e+02 Score=30.30 Aligned_cols=43 Identities=23% Similarity=0.218 Sum_probs=34.1
Q ss_pred ccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHH---HHcCCCCC
Q 003364 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA---LSCNFISP 655 (826)
Q Consensus 613 ~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a---~~~gi~~~ 655 (826)
.+-+++.+.|+.+++.|+.+.-+|.|++......+ +++||.-.
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs 126 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFS 126 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCcc
Confidence 45689999999999999999999999977665544 44676443
No 225
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=32.70 E-value=1.7e+02 Score=26.30 Aligned_cols=80 Identities=14% Similarity=0.231 Sum_probs=56.6
Q ss_pred HHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHc
Q 003364 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (826)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~ 628 (826)
-+...|+.|+-+.... +.+++-+ ...+.+-.++|+-++.-.--+..+++++.|+++
T Consensus 22 ~L~~~GfeVidLG~~v-~~e~~v~-----------------------aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~ 77 (128)
T cd02072 22 AFTEAGFNVVNLGVLS-PQEEFID-----------------------AAIETDADAILVSSLYGHGEIDCKGLREKCDEA 77 (128)
T ss_pred HHHHCCCEEEECCCCC-CHHHHHH-----------------------HHHHcCCCEEEEeccccCCHHHHHHHHHHHHHC
Confidence 3557899999887433 2222221 234468889999999988889999999999999
Q ss_pred CC-eE-EEEcCCCh------hHHHHHHHHcCC
Q 003364 629 GI-NF-WMLTGDKQ------NTAIQIALSCNF 652 (826)
Q Consensus 629 Gi-~v-~i~TGd~~------~~a~~~a~~~gi 652 (826)
|. .+ +++-|-.. ......++++|+
T Consensus 78 gl~~v~vivGG~~~i~~~d~~~~~~~L~~~Gv 109 (128)
T cd02072 78 GLKDILLYVGGNLVVGKQDFEDVEKRFKEMGF 109 (128)
T ss_pred CCCCCeEEEECCCCCChhhhHHHHHHHHHcCC
Confidence 97 44 56666532 334566888897
No 226
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=32.42 E-value=3.3e+02 Score=24.04 Aligned_cols=30 Identities=13% Similarity=0.194 Sum_probs=25.0
Q ss_pred CchHHHHHHHHHcCCeEEEEcCCChhHHHH
Q 003364 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQ 645 (826)
Q Consensus 616 ~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~ 645 (826)
++..++++.+++.|++++.+|++.......
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~~l~~ 103 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANSPLAK 103 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCChhHH
Confidence 578889999999999999999987654433
No 227
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=31.59 E-value=4.5e+02 Score=24.82 Aligned_cols=34 Identities=12% Similarity=0.053 Sum_probs=25.8
Q ss_pred chHHHHHHHHHcCCeEEEE-cCCChhHHHHHHHHc
Q 003364 617 GVPETIETLRKAGINFWML-TGDKQNTAIQIALSC 650 (826)
Q Consensus 617 ~~~~aI~~l~~~Gi~v~i~-TGd~~~~a~~~a~~~ 650 (826)
.+.+.|-++-.+|-|+.++ -|++...|++++.++
T Consensus 29 ~aa~~i~~~l~~G~Kvl~cGNGgSaadAqHfaael 63 (176)
T COG0279 29 RAAQLLVQSLLNGNKVLACGNGGSAADAQHFAAEL 63 (176)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcchhhHHHHHHHH
Confidence 3444555666788888888 788999999998775
No 228
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=29.65 E-value=1.6e+02 Score=28.00 Aligned_cols=31 Identities=10% Similarity=0.289 Sum_probs=26.2
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChh
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQN 641 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~ 641 (826)
+-++-|++.++|++-++.|+++.+-|.-+..
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~ 131 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVK 131 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCch
Confidence 4567799999999999999999998766543
No 229
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=29.61 E-value=78 Score=23.53 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=28.6
Q ss_pred cceEEEEE-eCCeEEEEEe-ecCccccEEEeeCCCcccC
Q 003364 99 NEKEVWVV-KQGIKKLIQS-QDIRVGNIVWLRENDEVPC 135 (826)
Q Consensus 99 ~~~~~~V~-r~g~~~~i~~-~~l~~GDII~l~~G~~iPa 135 (826)
....+.|+ .||++.+|+. .+..+||-|.+.+.+..+.
T Consensus 4 ~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 4 KKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred cCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhccc
Confidence 44566665 6899999875 4699999999998877654
No 230
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=29.53 E-value=48 Score=31.14 Aligned_cols=26 Identities=31% Similarity=0.599 Sum_probs=21.8
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCC
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDK 639 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~ 639 (826)
+.+++.++|+++++.|++++|+|.-.
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~ 55 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQS 55 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-C
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCcc
Confidence 45689999999999999999999764
No 231
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=28.90 E-value=1.1e+02 Score=25.00 Aligned_cols=46 Identities=26% Similarity=0.266 Sum_probs=36.4
Q ss_pred EEeeccccCCchHHHHHHHHHcCCeEEE-EcCCChhHHHHHHHHcCC
Q 003364 607 VTAIEDRLQDGVPETIETLRKAGINFWM-LTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 607 ~i~~~d~l~~~~~~aI~~l~~~Gi~v~i-~TGd~~~~a~~~a~~~gi 652 (826)
++.+.+...+.+.+..+.|+++|+++.+ ..+++.......|...|+
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~ 52 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKI 52 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCC
Confidence 4445566777888899999999999988 567777777788888886
No 232
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=28.89 E-value=57 Score=30.49 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=28.6
Q ss_pred CCchHHHHHHHHHcCCeEEEEcCCChhHHHHHH
Q 003364 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647 (826)
Q Consensus 615 ~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a 647 (826)
.+.+.++++++++.|++++-+||++--....++
T Consensus 122 S~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 122 SKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred CHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 478899999999999999999999976666555
No 233
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=28.80 E-value=94 Score=27.34 Aligned_cols=39 Identities=23% Similarity=0.487 Sum_probs=29.6
Q ss_pred cCCchHHHHHHHHHcCC-eEEEEcCCChhHHHHHHHHcCC
Q 003364 614 LQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIALSCNF 652 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi-~v~i~TGd~~~~a~~~a~~~gi 652 (826)
.++.+.+.++++.+.|+ .+|+.+|.....+...|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 34678899999999999 5999999888999999999887
No 234
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=28.67 E-value=1.1e+02 Score=30.00 Aligned_cols=79 Identities=28% Similarity=0.405 Sum_probs=57.4
Q ss_pred HHHHcCCeEEEEEEEecCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhccCcEEEEEEeeccccCCchHHHHHHHHHc
Q 003364 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (826)
Q Consensus 549 ~~~~~G~rvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~l~~~~~~aI~~l~~~ 628 (826)
-+...|++|+.++ ..++.+++.+. -.+.+-.++|+-+....-.+..++.++.+++.
T Consensus 105 ~l~~~G~~vi~lG-~~~p~~~l~~~-----------------------~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~ 160 (201)
T cd02070 105 MLEANGFEVIDLG-RDVPPEEFVEA-----------------------VKEHKPDILGLSALMTTTMGGMKEVIEALKEA 160 (201)
T ss_pred HHHHCCCEEEECC-CCCCHHHHHHH-----------------------HHHcCCCEEEEeccccccHHHHHHHHHHHHHC
Confidence 4567899998777 45555554331 22357889999988888788999999999999
Q ss_pred CC--eE-EEEcCCChhHHHHHHHHcCCC
Q 003364 629 GI--NF-WMLTGDKQNTAIQIALSCNFI 653 (826)
Q Consensus 629 Gi--~v-~i~TGd~~~~a~~~a~~~gi~ 653 (826)
+. ++ +++=|..... ..++++|-+
T Consensus 161 ~~~~~~~i~vGG~~~~~--~~~~~~GaD 186 (201)
T cd02070 161 GLRDKVKVMVGGAPVNQ--EFADEIGAD 186 (201)
T ss_pred CCCcCCeEEEECCcCCH--HHHHHcCCc
Confidence 87 54 6677765543 578888863
No 235
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=28.58 E-value=56 Score=28.95 Aligned_cols=32 Identities=9% Similarity=0.041 Sum_probs=26.2
Q ss_pred CCchHHHHHHHHHcCCeEEEEcCCChhHHHHH
Q 003364 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQI 646 (826)
Q Consensus 615 ~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~ 646 (826)
.+++.++++.+++.|.+++.+|+.+.......
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~s~la~~ 90 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVGSTLARE 90 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCChHHHh
Confidence 45789999999999999999999976544443
No 236
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.99 E-value=5.4e+02 Score=27.05 Aligned_cols=61 Identities=20% Similarity=0.184 Sum_probs=38.5
Q ss_pred EEEeCcccHHHHHHHhhc--CCCeEEEEcCC-cccHH---hHHhCCccEEecCC---chHHHHhhccccc
Q 003364 725 CCRVTPSQKAQLVELLKS--CDYRTLAIGDG-GNDVR---MIQKADIGVGISGR---EGLQAARAADYSI 785 (826)
Q Consensus 725 ~~~~~p~~K~~iv~~l~~--~~~~v~~iGDg-~ND~~---ml~~A~vgIam~gn---~~~~~~~~Ad~v~ 785 (826)
|.-+||.-=.+++++.+. .|.++..+|-| .-=.| +|..+|..+.+... ...++.+.||+++
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVI 207 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVV 207 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEE
Confidence 344455555566666654 48899999997 44443 56677777766322 2344556889987
No 237
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=26.55 E-value=64 Score=28.52 Aligned_cols=33 Identities=12% Similarity=0.141 Sum_probs=27.4
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHH
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQI 646 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~ 646 (826)
-.+++.++++.+++.|.+++.+|+.........
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~ 91 (120)
T cd05710 59 NTKETVAAAKFAKEKGATVIGLTDDEDSPLAKL 91 (120)
T ss_pred CChHHHHHHHHHHHcCCeEEEEECCCCCcHHHh
Confidence 457899999999999999999999877654443
No 238
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=26.32 E-value=66 Score=27.28 Aligned_cols=27 Identities=26% Similarity=0.489 Sum_probs=21.2
Q ss_pred EEeCCeEEEEEeecCccccEEEeeCCCc
Q 003364 105 VVKQGIKKLIQSQDIRVGNIVWLRENDE 132 (826)
Q Consensus 105 V~r~g~~~~i~~~~l~~GDII~l~~G~~ 132 (826)
|.-||+.. -|+.++++||+|.|.-|..
T Consensus 36 V~vNG~~a-KpS~~VK~GD~l~i~~~~~ 62 (100)
T COG1188 36 VKVNGQRA-KPSKEVKVGDILTIRFGNK 62 (100)
T ss_pred EEECCEEc-ccccccCCCCEEEEEeCCc
Confidence 33466655 7899999999999998864
No 239
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=26.02 E-value=56 Score=29.04 Aligned_cols=34 Identities=18% Similarity=0.348 Sum_probs=27.9
Q ss_pred cCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHH
Q 003364 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647 (826)
Q Consensus 614 l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a 647 (826)
-.+++.++++.++++|++++.+|+.+.......|
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~a 92 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTLAKLS 92 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCchhhhC
Confidence 4578899999999999999999998776555444
No 240
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=25.97 E-value=1.3e+02 Score=25.01 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=36.7
Q ss_pred EEEeecc---ccCCchHHHHHHHHHcCCeEEEE-cCCChhHHHHHHHHcCC
Q 003364 606 GVTAIED---RLQDGVPETIETLRKAGINFWML-TGDKQNTAIQIALSCNF 652 (826)
Q Consensus 606 G~i~~~d---~l~~~~~~aI~~l~~~Gi~v~i~-TGd~~~~a~~~a~~~gi 652 (826)
.++.+.+ ...+.+.+..+.|+++|+++.+- ++++......-|...|+
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~ 53 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGI 53 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTE
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCC
Confidence 4555666 67788889999999999998888 55566667778888886
No 241
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=25.80 E-value=1.1e+02 Score=24.71 Aligned_cols=24 Identities=17% Similarity=0.469 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 003364 262 DAMIDKLTGAIFVFQIVVVIVLGT 285 (826)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~i~~~ 285 (826)
|+..+++...++.+..+++++.+.
T Consensus 6 Q~~ae~l~~~il~~~~iisfi~Gy 29 (76)
T PF06645_consen 6 QRLAEKLMQYILIISAIISFIVGY 29 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777766666665555555544
No 242
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=25.78 E-value=1.2e+02 Score=23.73 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=24.0
Q ss_pred ceEEEEEeCCeEEEEEe---ecCccccEEEeeCCC
Q 003364 100 EKEVWVVKQGIKKLIQS---QDIRVGNIVWLREND 131 (826)
Q Consensus 100 ~~~~~V~r~g~~~~i~~---~~l~~GDII~l~~G~ 131 (826)
...++|-.+|..++|.. .++.|||-|.+..|-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 45677878898888875 568899999999883
No 243
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=25.41 E-value=5.2e+02 Score=31.22 Aligned_cols=62 Identities=13% Similarity=0.136 Sum_probs=41.5
Q ss_pred hhhhhhhhhHHHHHHHHhhhhhHhhcceEEEEEeCCeEEEEEeecCccccEEEeeCCCcccCcEEEEec
Q 003364 74 IFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGT 142 (826)
Q Consensus 74 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPaD~ill~s 142 (826)
.+++++..+.++++.+.+.++.+.+..-.... ...-.. +.-|....+...+..|-|.+++..
T Consensus 210 ~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~--p~~a~v-----ir~g~~~~v~~~~l~~GDiv~v~~ 271 (741)
T PRK11033 210 AMVLLLFLIGERLEGYAASRARRGVSALMALV--PETATR-----LRDGEREEVAIADLRPGDVIEVAA 271 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCEEEE-----EECCEEEEEEHHHCCCCCEEEECC
Confidence 44555667778888888888888776533211 111111 245778889999999999999954
No 244
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=24.79 E-value=44 Score=24.75 Aligned_cols=12 Identities=25% Similarity=0.717 Sum_probs=10.2
Q ss_pred ccccEEEeeCCC
Q 003364 120 RVGNIVWLREND 131 (826)
Q Consensus 120 ~~GDII~l~~G~ 131 (826)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999884
No 245
>TIGR02988 YaaA_near_RecF S4 domain protein YaaA. This small protein has a single S4 domain (pfam01479), as do bacterial ribosomal protein S4, some pseudouridine synthases, tyrosyl-tRNA synthetases. The S4 domain may bind RNA. Members of this protein family are found almost exclusively in the Firmicutes, and almost invariably just a few nucleotides upstream of the gene for the DNA replication and repair protein RecF. The few members of this family that are not near recF are found instead near dnaA and/or dnaN, the usual neighbors of recF, near the origin of replication. The conserved location suggests a possible role in replication in the Firmicutes lineage.
Probab=22.79 E-value=87 Score=23.56 Aligned_cols=28 Identities=21% Similarity=0.341 Sum_probs=21.4
Q ss_pred hcceEEEEEeCCeEEEEEeecCccccEEEe
Q 003364 98 ANEKEVWVVKQGIKKLIQSQDIRVGNIVWL 127 (826)
Q Consensus 98 ~~~~~~~V~r~g~~~~i~~~~l~~GDII~l 127 (826)
+....++| ||+...-+...|.+||.|.+
T Consensus 31 i~~G~V~V--Ng~~~~~~~~~l~~Gd~v~i 58 (59)
T TIGR02988 31 LQENEVLV--NGELENRRGKKLYPGDVIEI 58 (59)
T ss_pred HHcCCEEE--CCEEccCCCCCCCCCCEEEe
Confidence 34555555 88877777899999999975
No 246
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=22.15 E-value=93 Score=26.91 Aligned_cols=13 Identities=15% Similarity=0.169 Sum_probs=5.9
Q ss_pred cCccccEEEeeCC
Q 003364 118 DIRVGNIVWLREN 130 (826)
Q Consensus 118 ~l~~GDII~l~~G 130 (826)
+|++||-|....|
T Consensus 52 ~Lk~Gd~VvT~gG 64 (106)
T PRK05585 52 SLAKGDEVVTNGG 64 (106)
T ss_pred hcCCCCEEEECCC
Confidence 4445554444433
No 247
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=21.98 E-value=88 Score=25.74 Aligned_cols=8 Identities=25% Similarity=0.551 Sum_probs=3.1
Q ss_pred CccccEEE
Q 003364 119 IRVGNIVW 126 (826)
Q Consensus 119 l~~GDII~ 126 (826)
|+|||-|.
T Consensus 38 L~~Gd~Vv 45 (84)
T TIGR00739 38 LKKGDKVL 45 (84)
T ss_pred CCCCCEEE
Confidence 33333333
No 248
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=21.86 E-value=1.6e+02 Score=33.66 Aligned_cols=24 Identities=25% Similarity=0.217 Sum_probs=20.5
Q ss_pred EeCCeEEEEEeecCccccEEEeeC
Q 003364 106 VKQGIKKLIQSQDIRVGNIVWLRE 129 (826)
Q Consensus 106 ~r~g~~~~i~~~~l~~GDII~l~~ 129 (826)
++-|....++..+.+|-|.+.++-
T Consensus 52 l~~GDiv~v~~G~~iP~Dg~vl~g 75 (499)
T TIGR01494 52 LVPGDIVLVKSGEIVPADGVLLSG 75 (499)
T ss_pred CCCCCEEEECCCCEeeeeEEEEEc
Confidence 356888999999999999998865
No 249
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=21.71 E-value=2.1e+02 Score=21.72 Aligned_cols=33 Identities=6% Similarity=0.195 Sum_probs=21.5
Q ss_pred CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003364 253 IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGT 285 (826)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 285 (826)
....+.+.+...++++...+..+.++.+++.++
T Consensus 29 ~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 29 PPPKKRSPLLRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred CCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 344457788888888877666666555555443
No 250
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=21.65 E-value=1e+02 Score=25.70 Aligned_cols=27 Identities=15% Similarity=0.238 Sum_probs=21.0
Q ss_pred EEEEEeCCeEEEEEeecCccccEEEee
Q 003364 102 EVWVVKQGIKKLIQSQDIRVGNIVWLR 128 (826)
Q Consensus 102 ~~~V~r~g~~~~i~~~~l~~GDII~l~ 128 (826)
...+.++++...+++++|++||.|.+.
T Consensus 73 ~~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 73 LLLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EEEEecCCcEEEEEHHHCCCCCEEEec
Confidence 455566777677899999999999864
No 251
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=21.44 E-value=1.7e+02 Score=23.48 Aligned_cols=46 Identities=24% Similarity=0.203 Sum_probs=34.1
Q ss_pred EEeeccccCCchHHHHHHHHHcCCeEEEE-cCCChhHHHHHHHHcCC
Q 003364 607 VTAIEDRLQDGVPETIETLRKAGINFWML-TGDKQNTAIQIALSCNF 652 (826)
Q Consensus 607 ~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~-TGd~~~~a~~~a~~~gi 652 (826)
++.+.++..+.+.+..++|+++|+++.+. .+++.......|...|+
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~ 52 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGA 52 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCC
Confidence 34455556677888889999999998874 44577777778887775
No 252
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=21.23 E-value=1.6e+02 Score=30.51 Aligned_cols=48 Identities=21% Similarity=0.331 Sum_probs=39.5
Q ss_pred EEEeeccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHHHHH---HcCCC
Q 003364 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL---SCNFI 653 (826)
Q Consensus 606 G~i~~~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~---~~gi~ 653 (826)
|++-..+..-|++.++++.|+..|-++.++|..+-.+-..+++ ++|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 6777788899999999999999999999999988776655544 45654
No 253
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=21.11 E-value=3.9e+02 Score=28.00 Aligned_cols=42 Identities=12% Similarity=0.210 Sum_probs=32.1
Q ss_pred ccccCCchHHHHHHHHHcCCeEEEEcCCChhHHHH-HHHHcCC
Q 003364 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQ-IALSCNF 652 (826)
Q Consensus 611 ~d~l~~~~~~aI~~l~~~Gi~v~i~TGd~~~~a~~-~a~~~gi 652 (826)
|..=++++...-+.|+..|.+++++|.+....+.. .++.++.
T Consensus 58 ETDGP~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 58 ETDGPPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred CCCChHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 33457788888899999999999999988766654 4455554
No 254
>COG0522 RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis]
Probab=20.85 E-value=79 Score=31.02 Aligned_cols=32 Identities=22% Similarity=0.324 Sum_probs=26.8
Q ss_pred EEEeCCeEEEEEeecCccccEEEeeCCCcccC
Q 003364 104 WVVKQGIKKLIQSQDIRVGNIVWLRENDEVPC 135 (826)
Q Consensus 104 ~V~r~g~~~~i~~~~l~~GDII~l~~G~~iPa 135 (826)
.|.-||+.+.||+-.+.|||.+.|..-+.-|.
T Consensus 120 HI~VnGk~V~iPSy~V~~gdei~V~~k~~s~~ 151 (205)
T COG0522 120 HILVNGKRVNIPSYLVSPGDEISVREKSKSPI 151 (205)
T ss_pred eEEECCEEeccCcEEecCCCEEEeeecccchh
Confidence 45669999999999999999999987655444
No 255
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=20.53 E-value=3.4e+02 Score=26.91 Aligned_cols=125 Identities=14% Similarity=0.268 Sum_probs=73.9
Q ss_pred EEEeeccccCCc--hHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHcCCCCCCCCCcEEEecCCCHHHHHHHHHHHHHHc
Q 003364 606 GVTAIEDRLQDG--VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM 683 (826)
Q Consensus 606 G~i~~~d~l~~~--~~~aI~~l~~~Gi~v~i~TGd~~~~a~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (826)
|.+-+++ ++|+ .++.+-.|++.+ -|+.|.-...-|..+.+.+||..--+. +++++.....
T Consensus 92 ~~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFeg--ii~~e~~np~------------- 153 (244)
T KOG3109|consen 92 GRLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEG--IICFETLNPI------------- 153 (244)
T ss_pred ccCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccc--eeEeeccCCC-------------
Confidence 3344455 5554 445555555444 899999999999999999998543222 2222111100
Q ss_pred ccccCCCCceEEEEcChhHHHHHHHHHHHHhhhccccceeEEEEeCcccHHHHHHHhhcC-CCeEEEEcCCcccHHhHHh
Q 003364 684 RITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQK 762 (826)
Q Consensus 684 ~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~ml~~ 762 (826)
...+.|.-+++-=..+.+..+.. +.+++.|-|+.+-+..=+.
T Consensus 154 -------------------------------------~~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~ 196 (244)
T KOG3109|consen 154 -------------------------------------EKTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKE 196 (244)
T ss_pred -------------------------------------CCceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHh
Confidence 12344444444323455555554 7899999999999999998
Q ss_pred CCccEEecCCchHHHHhhccccccc
Q 003364 763 ADIGVGISGREGLQAARAADYSIGK 787 (826)
Q Consensus 763 A~vgIam~gn~~~~~~~~Ad~v~~~ 787 (826)
.|..=.+.+.+. -..-+|+++.+
T Consensus 197 vGl~tvlv~~~~--~~~~~d~~l~~ 219 (244)
T KOG3109|consen 197 VGLKTVLVGREH--KIKGVDYALEQ 219 (244)
T ss_pred ccceeEEEEeee--cccchHHHHHH
Confidence 887554434332 11345555533
No 256
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=20.45 E-value=1.1e+02 Score=25.10 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=27.5
Q ss_pred EEEeecccc-CCchHHHHHHHHHcCCeEEEEcCCCh
Q 003364 606 GVTAIEDRL-QDGVPETIETLRKAGINFWMLTGDKQ 640 (826)
Q Consensus 606 G~i~~~d~l-~~~~~~aI~~l~~~Gi~v~i~TGd~~ 640 (826)
..++++-+- ++...++++.|+++|+++...|.+..
T Consensus 42 v~i~ie~~~~~~~~~~i~~~L~~~G~~~~~~~~~~~ 77 (85)
T cd04906 42 IFVGVSVANGAEELAELLEDLKSAGYEVVDLSDDEL 77 (85)
T ss_pred EEEEEEeCCcHHHHHHHHHHHHHCCCCeEECCCCHH
Confidence 345666666 77889999999999999988776643
Done!