BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003368
(825 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 181/626 (28%), Positives = 267/626 (42%), Gaps = 93/626 (14%)
Query: 34 VTVLDLKSKGLIGS------LSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYL 87
+ VLDL + + G+ LS G L + + +S N I G + ++ R LE L +
Sbjct: 150 LEVLDLSANSISGANVVGWVLSDGCGEL---KHLAISGNKISGDV--DVSRCVNLEFLDV 204
Query: 88 SHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHF 147
S N+ IP L CS L L + NKL G + LK L I N G IP
Sbjct: 205 SSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL 263
Query: 148 LGNITSLEAISLAYNSLGGNIPSSL-GQLKELKSLGLGG-----TIPPSIYNLSLLANFS 201
+ SL+ +SLA N G IP L G L L L G +PP + SLL + +
Sbjct: 264 --PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLA 321
Query: 202 VPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSN-ASNLQSLEILGNNFFGKL 260
+ N ++ +S N FSG P + +N +++L +L++ NNF G +
Sbjct: 322 LSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 381
Query: 261 SVNFGDMKSLAYLNVAINNLG-SGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSIV 319
N + + N G +G+ +L+NCS L L+L N G +P S+
Sbjct: 382 LPNLCQNPKNTLQELYLQNNGFTGK-----IPPTLSNCSELVSLHLSFNYLSGTIPSSLG 436
Query: 320 S---------------GSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRH 364
S G IP E+ + +L + +D N G+IP +S NL ++++ +
Sbjct: 437 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSN 496
Query: 365 NQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIF 424
N+L+GEIP G L +L L L NN+ SG IP+ LG+ + L L L N +G IP +F
Sbjct: 497 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 556
Query: 425 NIS-------------------------HMSDSL--------------------NFARNH 439
S H + +L N
Sbjct: 557 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 616
Query: 440 LVGSIPPKIGNLKVLRMFVVSSNNLSGEIPSEIGSCFYLQEIYMAENFFRGSIPSSLVSL 499
G P N + +S N LSG IP EIGS YL + + N GSIP + L
Sbjct: 617 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDL 676
Query: 500 KDLREIDLSQNNLSGKIPISLERLP-LEYLNLSFNDLEGQVPTKGIFANASAISVSGNSN 558
+ L +DLS N L G+IP ++ L L ++LS N+L G +P G F N
Sbjct: 677 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPG 736
Query: 559 RLCGGIPELQLPKCPKNNSRNHKVYR 584
LCG LP+C +N+ + ++
Sbjct: 737 -LCG----YPLPRCDPSNADGYAHHQ 757
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 174/579 (30%), Positives = 267/579 (46%), Gaps = 112/579 (19%)
Query: 7 EGVLNSWNDSHHFCDWEGITCSPRHRRVTVLDLKSKGL-IG------------------- 46
+ +L W+ + + C ++G+TC R +VT +DL SK L +G
Sbjct: 24 KNLLPDWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 81
Query: 47 --------------------------SLSPQIGNL------SFLREIHLSNNTIQ--GKI 72
SLS + L S L+ +++S+NT+ GK+
Sbjct: 82 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKV 141
Query: 73 PGEIGRLFRLEALYLSHNSLVGE-IPGNL--SYCSRLIGLYLGRNKLEGSIPSEFVSLYN 129
G + +L LE L LS NS+ G + G + C L L + NK+ G + + N
Sbjct: 142 SGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVN 198
Query: 130 LKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLG----- 184
L+ L + NN + GIP FLG+ ++L+ + ++ N L G+ ++ ELK L +
Sbjct: 199 LEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 257
Query: 185 GTIPPSIYNLSLLANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNAS 244
G IPP L L S+ EN+ F+G P S A
Sbjct: 258 GPIPP--LPLKSLQYLSLAENK-------------------------FTGEIPDFLSGAC 290
Query: 245 N-LQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFL 303
+ L L++ GN+F+G + FG L L ++ NN SGE + +L L L
Sbjct: 291 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF-SGELP----MDTLLKMRGLKVL 345
Query: 304 NLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKI-PEEMSRLQN-LQFLN 361
+L N+F G LP S+ + S SL +++ N F G I P +N LQ L
Sbjct: 346 DLSFNEFSGELPESLTNLS--------ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 397
Query: 362 MRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPE 421
+++N +G+IP + N S LV L L N LSG IPSSLG+L +L L L+ N L G IP+
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 422 EIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLSGEIPSEIGSCFYLQEI 481
E+ + + ++L N L G IP + N L +S+N L+GEIP IG L +
Sbjct: 458 ELMYVKTL-ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 516
Query: 482 YMAENFFRGSIPSSLVSLKDLREIDLSQNNLSGKIPISL 520
++ N F G+IP+ L + L +DL+ N +G IP ++
Sbjct: 517 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 167/372 (44%), Gaps = 41/372 (11%)
Query: 27 CSPRHRRVTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALY 86
C + L L++ G G + P + N S L +HLS N + G IP +G L +L L
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 445
Query: 87 LSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPH 146
L N L GEIP L Y L L L N L G IPS + NL +++ N LTG IP
Sbjct: 446 LWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 505
Query: 147 FLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLANFSVPENR 206
++G + +L + L+ NS GNIP+ LG + L L L L N ++P
Sbjct: 506 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN----------LFNGTIPA-- 553
Query: 207 XXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGN--NFFGKLSVNF 264
Q +I+ NF +G + N + GN F G S
Sbjct: 554 ------------AMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL 601
Query: 265 GDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSIVSGSIP 324
+ + N+ G S + N ++ FL++ N ++SG IP
Sbjct: 602 NRLSTRNPCNITSRVYGGHTSP------TFDNNGSMMFLDMSYN---------MLSGYIP 646
Query: 325 SEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKL 384
EIG + L+++ + HN G IP+E+ L+ L L++ N+L G IP + L+ L ++
Sbjct: 647 KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 706
Query: 385 ILGNNNLSGVIP 396
L NNNLSG IP
Sbjct: 707 DLSNNNLSGPIP 718
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 157/344 (45%), Gaps = 56/344 (16%)
Query: 269 SLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLN------------------------ 304
SL L+++ N+L S ++ + SL +CS L FLN
Sbjct: 98 SLTSLDLSRNSL----SGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVL 153
Query: 305 -LVANQFKGA-------------LPHSIVSGSIPS---EIGKLVSLYLIEMDHNQFEGKI 347
L AN GA L H +SG+ S ++ + V+L +++ N F I
Sbjct: 154 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGI 213
Query: 348 PEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLAL 407
P + LQ L++ N+LSG+ + + L L + +N G IP LK L
Sbjct: 214 P-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQY 270
Query: 408 LHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLSGE 467
L L +N +G IP+ + L+ + NH G++PP G+ +L +SSNN SGE
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 468 IPSE-IGSCFYLQEIYMAENFFRGSIPSSLVSLK-DLREIDLSQNNLSGKIPISLERLP- 524
+P + + L+ + ++ N F G +P SL +L L +DLS NN SG I +L + P
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 390
Query: 525 --LEYLNLSFNDLEGQVPTKGIFANASA-ISVSGNSNRLCGGIP 565
L+ L L N G++P +N S +S+ + N L G IP
Sbjct: 391 NTLQELYLQNNGFTGKIPP--TLSNCSELVSLHLSFNYLSGTIP 432
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 181/622 (29%), Positives = 265/622 (42%), Gaps = 93/622 (14%)
Query: 34 VTVLDLKSKGLIGS------LSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYL 87
+ VLDL + + G+ LS G L + + +S N I G + ++ R LE L +
Sbjct: 153 LEVLDLSANSISGANVVGWVLSDGCGEL---KHLAISGNKISGDV--DVSRCVNLEFLDV 207
Query: 88 SHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHF 147
S N+ IP L CS L L + NKL G + LK L I N G IP
Sbjct: 208 SSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL 266
Query: 148 LGNITSLEAISLAYNSLGGNIPSSL-GQLKELKSLGLGG-----TIPPSIYNLSLLANFS 201
+ SL+ +SLA N G IP L G L L L G +PP + SLL + +
Sbjct: 267 --PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLA 324
Query: 202 VPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSN-ASNLQSLEILGNNFFGKL 260
+ N ++ +S N FSG P + +N +++L +L++ NNF G +
Sbjct: 325 LSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI 384
Query: 261 SVNFGDMKSLAYLNVAINNLG-SGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSIV 319
N + + N G +G+ +L+NCS L L+L N G +P S+
Sbjct: 385 LPNLCQNPKNTLQELYLQNNGFTGK-----IPPTLSNCSELVSLHLSFNYLSGTIPSSLG 439
Query: 320 S---------------GSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRH 364
S G IP E+ + +L + +D N G+IP +S NL ++++ +
Sbjct: 440 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSN 499
Query: 365 NQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIF 424
N+L+GEIP G L +L L L NN+ SG IP+ LG+ + L L L N +G IP +F
Sbjct: 500 NRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559
Query: 425 NIS-------------------------HMSDSL--------------------NFARNH 439
S H + +L N
Sbjct: 560 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 619
Query: 440 LVGSIPPKIGNLKVLRMFVVSSNNLSGEIPSEIGSCFYLQEIYMAENFFRGSIPSSLVSL 499
G P N + +S N LSG IP EIGS YL + + N GSIP + L
Sbjct: 620 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDL 679
Query: 500 KDLREIDLSQNNLSGKIPISLERLP-LEYLNLSFNDLEGQVPTKGIFANASAISVSGNSN 558
+ L +DLS N L G+IP ++ L L ++LS N+L G +P G F N
Sbjct: 680 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPG 739
Query: 559 RLCGGIPELQLPKCPKNNSRNH 580
LCG LP+C +N+ +
Sbjct: 740 -LCG----YPLPRCDPSNADGY 756
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 174/579 (30%), Positives = 267/579 (46%), Gaps = 112/579 (19%)
Query: 7 EGVLNSWNDSHHFCDWEGITCSPRHRRVTVLDLKSKGL-IG------------------- 46
+ +L W+ + + C ++G+TC R +VT +DL SK L +G
Sbjct: 27 KNLLPDWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 84
Query: 47 --------------------------SLSPQIGNL------SFLREIHLSNNTIQ--GKI 72
SLS + L S L+ +++S+NT+ GK+
Sbjct: 85 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKV 144
Query: 73 PGEIGRLFRLEALYLSHNSLVGE-IPGNL--SYCSRLIGLYLGRNKLEGSIPSEFVSLYN 129
G + +L LE L LS NS+ G + G + C L L + NK+ G + + N
Sbjct: 145 SGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVN 201
Query: 130 LKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLG----- 184
L+ L + NN + GIP FLG+ ++L+ + ++ N L G+ ++ ELK L +
Sbjct: 202 LEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 260
Query: 185 GTIPPSIYNLSLLANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNAS 244
G IPP L L S+ EN+ F+G P S A
Sbjct: 261 GPIPP--LPLKSLQYLSLAENK-------------------------FTGEIPDFLSGAC 293
Query: 245 N-LQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFL 303
+ L L++ GN+F+G + FG L L ++ NN SGE + +L L L
Sbjct: 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF-SGELP----MDTLLKMRGLKVL 348
Query: 304 NLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKI-PEEMSRLQN-LQFLN 361
+L N+F G LP S+ + S SL +++ N F G I P +N LQ L
Sbjct: 349 DLSFNEFSGELPESLTNLS--------ASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400
Query: 362 MRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPE 421
+++N +G+IP + N S LV L L N LSG IPSSLG+L +L L L+ N L G IP+
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 422 EIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLSGEIPSEIGSCFYLQEI 481
E+ + + ++L N L G IP + N L +S+N L+GEIP IG L +
Sbjct: 461 ELMYVKTL-ETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 519
Query: 482 YMAENFFRGSIPSSLVSLKDLREIDLSQNNLSGKIPISL 520
++ N F G+IP+ L + L +DL+ N +G IP ++
Sbjct: 520 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 167/372 (44%), Gaps = 41/372 (11%)
Query: 27 CSPRHRRVTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALY 86
C + L L++ G G + P + N S L +HLS N + G IP +G L +L L
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLK 448
Query: 87 LSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPH 146
L N L GEIP L Y L L L N L G IPS + NL +++ N LTG IP
Sbjct: 449 LWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508
Query: 147 FLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLANFSVPENR 206
++G + +L + L+ NS GNIP+ LG + L L L L N ++P
Sbjct: 509 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN----------LFNGTIPA-- 556
Query: 207 XXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGN--NFFGKLSVNF 264
Q +I+ NF +G + N + GN F G S
Sbjct: 557 ------------AMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL 604
Query: 265 GDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSIVSGSIP 324
+ + N+ G S + N ++ FL++ N ++SG IP
Sbjct: 605 NRLSTRNPCNITSRVYGGHTS------PTFDNNGSMMFLDMSYN---------MLSGYIP 649
Query: 325 SEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKL 384
EIG + L+++ + HN G IP+E+ L+ L L++ N+L G IP + L+ L ++
Sbjct: 650 KEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709
Query: 385 ILGNNNLSGVIP 396
L NNNLSG IP
Sbjct: 710 DLSNNNLSGPIP 721
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 157/344 (45%), Gaps = 56/344 (16%)
Query: 269 SLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLN------------------------ 304
SL L+++ N+L S ++ + SL +CS L FLN
Sbjct: 101 SLTSLDLSRNSL----SGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVL 156
Query: 305 -LVANQFKGA-------------LPHSIVSGSIPS---EIGKLVSLYLIEMDHNQFEGKI 347
L AN GA L H +SG+ S ++ + V+L +++ N F I
Sbjct: 157 DLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGI 216
Query: 348 PEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLAL 407
P + LQ L++ N+LSG+ + + L L + +N G IP LK L
Sbjct: 217 P-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQY 273
Query: 408 LHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLSGE 467
L L +N +G IP+ + L+ + NH G++PP G+ +L +SSNN SGE
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 468 IPSE-IGSCFYLQEIYMAENFFRGSIPSSLVSLK-DLREIDLSQNNLSGKIPISLERLP- 524
+P + + L+ + ++ N F G +P SL +L L +DLS NN SG I +L + P
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 525 --LEYLNLSFNDLEGQVPTKGIFANASA-ISVSGNSNRLCGGIP 565
L+ L L N G++P +N S +S+ + N L G IP
Sbjct: 394 NTLQELYLQNNGFTGKIPPT--LSNCSELVSLHLSFNYLSGTIP 435
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 125/255 (49%), Gaps = 15/255 (5%)
Query: 323 IPSEIGKLVSLYLIEMDH-NQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSL 381
IPS + L L + + N G IP +++L L +L + H +SG IP + +L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 382 VKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLV 441
V L N LSG +P S+ +L L + N +SGAIP+ + S + S+ +RN L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 442 GSIPPKIGNLKVLRMFVVSSNNLSGEIPSEIGSCFYLQEIYMAEN---FFRGSIPSSLVS 498
G IPP NL L +S N L G+ GS Q+I++A+N F G + S
Sbjct: 188 GKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLS--- 243
Query: 499 LKDLREIDLSQNNLSGKIPISLERLP-LEYLNLSFNDLEGQVPTKGIFANASAISVSGNS 557
K+L +DL N + G +P L +L L LN+SFN+L G++P G +S N+
Sbjct: 244 -KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFD-VSAYANN 301
Query: 558 NRLCGGIPELQLPKC 572
LCG LP C
Sbjct: 302 KCLCGS----PLPAC 312
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 141/355 (39%), Gaps = 70/355 (19%)
Query: 27 CSPRHRRVTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALY 86
C+P+ ++ + K G +LS S+L N T G + + +R+ L
Sbjct: 3 CNPQDKQALLQIKKDLGNPTTLS------SWLPTTDCCNRTWLGVLCDTDTQTYRVNNLD 56
Query: 87 LSHNSLVGE--IPGNLSYCSRLIGLYLGR-NKLEGSIPSEFVSLYNLKELAIQENNLTGG 143
LS +L IP +L+ L LY+G N L G IP L L L I N++G
Sbjct: 57 LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGA 116
Query: 144 IPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLANFSVP 203
IP FL I +L + +YN+L G T+PPSI +L L +
Sbjct: 117 IPDFLSQIKTLVTLDFSYNALSG-------------------TLPPSISSLPNLVGITFD 157
Query: 204 ENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNFFGKLSVN 263
NR IS N +G P F+N NL +++ N G SV
Sbjct: 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVL 216
Query: 264 FGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSIVSGSI 323
FG K+ +++A N+L +L
Sbjct: 217 FGSDKNTQKIHLAKNSLA---------------------FDL------------------ 237
Query: 324 PSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNL 378
++G +L +++ +N+ G +P+ +++L+ L LN+ N L GEIP GNL
Sbjct: 238 -GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNL 290
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 630 LRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQ-LQGASKSFA 688
L++ S L A+D FS+ +++G G FG VYKG DGT+VA+K L + QG F
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERXQGGELQFQ 83
Query: 689 AECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH--PDAIPQTDE 746
E + HRNL+R+ C + + LVY YM NGS+ + L P++ P D
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMT-----PTERLLVYPYMANGSVASCLRERPESQPPLD- 137
Query: 747 ENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL 806
+R IA+ A + YLH HC IH D+K +NILLD A VGDFGL
Sbjct: 138 ---------WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 188
Query: 807 ARL 809
A+L
Sbjct: 189 AKL 191
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 94/183 (51%), Gaps = 19/183 (10%)
Query: 630 LRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQ-LQGASKSFA 688
L++ S L A+D F + +++G G FG VYKG DG +VA+K L + QG F
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKRLKEERTQGGELQFQ 75
Query: 689 AECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH--PDAIPQTDE 746
E + HRNL+R+ C + + LVY YM NGS+ + L P++ P D
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMT-----PTERLLVYPYMANGSVASCLRERPESQPPLD- 129
Query: 747 ENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL 806
+R IA+ A + YLH HC IH D+K +NILLD A VGDFGL
Sbjct: 130 ---------WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 807 ARL 809
A+L
Sbjct: 181 AKL 183
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 632 KVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAEC 691
+V L +AT+ F LIG G FG VYKG RDG VA+K + + F E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEI 86
Query: 692 RALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEI 751
L RH +LV +I C + N+ L+Y+YM NG+L+ L+ +P
Sbjct: 87 ETLSFCRHPHLVSLIGFCD----ERNEM-ILIYKYMENGNLKRHLYGSDLPTM------- 134
Query: 752 RNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQ 811
+++ +R+ I I A + YLH IH D+K NILLD N + DFG+++
Sbjct: 135 -SMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGT 190
Query: 812 EVPNNQSSSV 821
E+ V
Sbjct: 191 ELDQTHLXXV 200
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 632 KVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAEC 691
+V L +AT+ F LIG G FG VYKG RDG VA+K + + F E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEI 86
Query: 692 RALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEI 751
L RH +LV +I C + N+ L+Y+YM NG+L+ L+ +P
Sbjct: 87 ETLSFCRHPHLVSLIGFCD----ERNEM-ILIYKYMENGNLKRHLYGSDLPTM------- 134
Query: 752 RNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+++ +R+ I I A + YLH IH D+K NILLD N + DFG+++
Sbjct: 135 -SMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK 187
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 29/169 (17%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIK----VLNLQLQGASKSFAAECRALRNIRHRNLVRVI 706
+G G FG VYKG + T VA+K ++++ + + F E + + +H NLV ++
Sbjct: 39 MGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDEIRNLTLLERISIAID 765
S G+D LVY YMPNGSL + L D P L+ R IA
Sbjct: 97 GFSSD----GDDL-CLVYVYMPNGSLLDRLSCLDGTPP----------LSWHMRCKIAQG 141
Query: 766 VASAVDYLH--HHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
A+ +++LH HH IH D+K +NILLD TA + DFGLAR ++
Sbjct: 142 AANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGLARASEK 185
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 29/169 (17%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIK----VLNLQLQGASKSFAAECRALRNIRHRNLVRVI 706
+G G FG VYKG + T VA+K ++++ + + F E + + +H NLV ++
Sbjct: 39 MGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDEIRNLTLLERISIAID 765
S G+D LVY YMPNGSL + L D P L+ R IA
Sbjct: 97 GFSSD----GDDL-CLVYVYMPNGSLLDRLSCLDGTPP----------LSWHMRCKIAQG 141
Query: 766 VASAVDYLH--HHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
A+ +++LH HH IH D+K +NILLD TA + DFGLAR ++
Sbjct: 142 AANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGLARASEK 185
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 86/169 (50%), Gaps = 29/169 (17%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIK----VLNLQLQGASKSFAAECRALRNIRHRNLVRVI 706
+G G FG VYKG + T VA+K ++++ + + F E + + +H NLV ++
Sbjct: 33 MGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDEIRNLTLLERISIAID 765
S G+D LVY YMPNGSL + L D P L+ R IA
Sbjct: 91 GFSSD----GDDL-CLVYVYMPNGSLLDRLSCLDGTPP----------LSWHMRCKIAQG 135
Query: 766 VASAVDYLH--HHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
A+ +++LH HH IH D+K +NILLD TA + DFGLAR ++
Sbjct: 136 AANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGLARASEK 179
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 19/162 (11%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK--SFAAECRALRNIRHRNLVRVITS 708
IG GSFG+V++ + G+ VA+K+L Q A + F E ++ +RH N+V + +
Sbjct: 45 IGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ Q + ++V +Y+ GSL LH E+ DE R R+S+A DVA
Sbjct: 103 VT----QPPNL-SIVTEYLSRGSLYRLLHKSG---AREQLDERR------RLSMAYDVAK 148
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
++YLH+ P +H DLK N+L+D T V DFGL+RL+
Sbjct: 149 GMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK 189
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 22/200 (11%)
Query: 618 GKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN 677
G + I R R SY ++A++ ST IG GSFG+VYKG + D + +KV++
Sbjct: 12 GTQEKNKIRPRGQRDSSYYWEIEASEVMLSTR-IGSGSFGTVYKGKWHGDVAVKILKVVD 70
Query: 678 LQLQGASKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH 737
+ ++F E LR RH N++ + + D A+V Q+ SL LH
Sbjct: 71 PTPE-QFQAFRNEVAVLRKTRHVNILLFM------GYMTKDNLAIVTQWCEGSSLYKHLH 123
Query: 738 PDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNL 797
+ +T + + I IA A +DYLH + IH D+K +NI L L
Sbjct: 124 ---VQET--------KFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGL 169
Query: 798 TAHVGDFGLARLRQEVPNNQ 817
T +GDFGLA ++ +Q
Sbjct: 170 TVKIGDFGLATVKSRWSGSQ 189
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 19/177 (10%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK--SFAAECRALRNIRHRNLVRVITS 708
IG GSFG+V++ + G+ VA+K+L Q A + F E ++ +RH N+V + +
Sbjct: 45 IGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ Q + ++V +Y+ GSL LH E+ DE R R+S+A DVA
Sbjct: 103 VT----QPPNL-SIVTEYLSRGSLYRLLHKSG---AREQLDERR------RLSMAYDVAK 148
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVGDLE 825
++YLH+ P +H +LK N+L+D T V DFGL+RL+ + S+ G E
Sbjct: 149 GMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE 204
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 33/166 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 68
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ ++ A+V Q+ SL + LH I +T E +++ I IA
Sbjct: 69 FMGYSTAPQL------AIVTQWCEGSSLYHHLH---IIETKFE--------MIKLIDIAR 111
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
A +DYLH + IH DLK +NI L +LT +GDFGLA ++
Sbjct: 112 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 154
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 85/169 (50%), Gaps = 39/169 (23%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 70
Query: 705 VITSCSSIDFQGNDFK---ALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
F G K A+V Q+ SL + LH I +T E +++ I
Sbjct: 71 ---------FMGYSTKPQLAIVTQWCEGSSLYHHLH---IIETKFE--------MIKLID 110
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
IA A +DYLH + IH DLK +NI L +LT +GDFGLA ++
Sbjct: 111 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 156
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 85/169 (50%), Gaps = 39/169 (23%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 73
Query: 705 VITSCSSIDFQGNDFK---ALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
F G K A+V Q+ SL + LH I +T E +++ I
Sbjct: 74 ---------FMGYSTKPQLAIVTQWCEGSSLYHHLH---IIETKFE--------MIKLID 113
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
IA A +DYLH + IH DLK +NI L +LT +GDFGLA ++
Sbjct: 114 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 159
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 85/169 (50%), Gaps = 39/169 (23%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 73
Query: 705 VITSCSSIDFQGNDFK---ALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
F G K A+V Q+ SL + LH I +T E +++ I
Sbjct: 74 ---------FMGYSTKPQLAIVTQWCEGSSLYHHLH---IIETKFE--------MIKLID 113
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
IA A +DYLH + IH DLK +NI L +LT +GDFGLA ++
Sbjct: 114 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 159
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 85/169 (50%), Gaps = 39/169 (23%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 68
Query: 705 VITSCSSIDFQGNDFK---ALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
F G K A+V Q+ SL + LH I +T E +++ I
Sbjct: 69 ---------FMGYSTKPQLAIVTQWCEGSSLYHHLH---IIETKFE--------MIKLID 108
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
IA A +DYLH + IH DLK +NI L +LT +GDFGLA ++
Sbjct: 109 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 154
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 84/166 (50%), Gaps = 33/166 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 96
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ + A+V Q+ SL + LH I +T E +++ I IA
Sbjct: 97 FMGYSTKPQL------AIVTQWCEGSSLYHHLH---IIETKFE--------MIKLIDIAR 139
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
A +DYLH + IH DLK +NI L +LT +GDFGLA ++
Sbjct: 140 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 182
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 85/169 (50%), Gaps = 39/169 (23%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 95
Query: 705 VITSCSSIDFQGNDFK---ALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
F G K A+V Q+ SL + LH I +T E +++ I
Sbjct: 96 ---------FMGYSTKPQLAIVTQWCEGSSLYHHLH---IIETKFE--------MIKLID 135
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
IA A +DYLH + IH DLK +NI L +LT +GDFGLA ++
Sbjct: 136 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK 181
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 83/168 (49%), Gaps = 29/168 (17%)
Query: 652 GIGSFGSVYKGTFDRDGTIVAIK----VLNLQLQGASKSFAAECRALRNIRHRNLVRVIT 707
G G FG VYKG + T VA+K ++++ + + F E + +H NLV ++
Sbjct: 31 GEGGFGVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDEIRNLTLLERISIAIDV 766
S G+D LVY Y PNGSL + L D P L+ R IA
Sbjct: 89 FSSD----GDDL-CLVYVYXPNGSLLDRLSCLDGTPP----------LSWHXRCKIAQGA 133
Query: 767 ASAVDYLH--HHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
A+ +++LH HH IH D+K +NILLD TA + DFGLAR ++
Sbjct: 134 ANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGLARASEK 176
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 33/163 (20%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 96
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ + A+V Q+ SL + LH I +T E +++ I IA
Sbjct: 97 FMGYSTKPQL------AIVTQWCEGSSLYHHLH---IIETKFE--------MIKLIDIAR 139
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
A +DYLH + IH DLK +NI L +LT +GDFGLA
Sbjct: 140 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 83/166 (50%), Gaps = 39/166 (23%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 68
Query: 705 VITSCSSIDFQGNDFK---ALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
F G K A+V Q+ SL + LH I +T E +++ I
Sbjct: 69 ---------FMGYSTKPQLAIVTQWCEGSSLYHHLH---IIETKFE--------MIKLID 108
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
IA A +DYLH + IH DLK +NI L +LT +GDFGLA
Sbjct: 109 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 33/163 (20%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 88
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ + A+V Q+ SL + LH I +T E +++ I IA
Sbjct: 89 FMGYSTKPQL------AIVTQWCEGSSLYHHLH---IIETKFE--------MIKLIDIAR 131
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
A +DYLH + IH DLK +NI L +LT +GDFGLA
Sbjct: 132 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 81/166 (48%), Gaps = 33/166 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 72
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ + A+V Q+ SL + LH E E++ L I IA
Sbjct: 73 FMGYSTKPQL------AIVTQWCEGSSLYHHLH------ASETKFEMKKL-----IDIAR 115
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
A +DYLH + IH DLK +NI L + T +GDFGLA ++
Sbjct: 116 QTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVK 158
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 80/163 (49%), Gaps = 33/163 (20%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 84
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ ++ A+V Q+ SL + LH E E++ L I IA
Sbjct: 85 FMGYSTAPQL------AIVTQWCEGSSLYHHLH------ASETKFEMKKL-----IDIAR 127
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
A +DYLH + IH DLK +NI L + T +GDFGLA
Sbjct: 128 QTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 79/163 (48%), Gaps = 33/163 (20%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL------QLQGASKSFAAECRALRNIRHRNLVR 704
IG GSFG+VYKG + D VA+K+LN+ QLQ +F E LR RH N++
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQ----AFKNEVGVLRKTRHVNILL 84
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ + A+V Q+ SL + LH E E++ L I IA
Sbjct: 85 FMGYSTKPQL------AIVTQWCEGSSLYHHLH------ASETKFEMKKL-----IDIAR 127
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
A +DYLH + IH DLK +NI L + T +GDFGLA
Sbjct: 128 QTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 17/167 (10%)
Query: 651 IGIGSFGSV-----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRV 705
+G G+FG V Y + +D +VA+K L A K F E L N++H ++V+
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIR-NLTLLERIS 761
C D +V++YM +G L +L PDA+ D + + + L L + +
Sbjct: 83 YGVCGD-----GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
IA +AS + YL + +H DL N L+ NL +GDFG++R
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 651 IGIGSFGSV-----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRV 705
+G G+FG V Y ++D +VA+K L A K F E L N++H ++V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRNLTLLERISI 762
C D +V++YM +G L +L PDA+ E + LT + + I
Sbjct: 81 YGVCVE-----GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMA--EGNPPTELTQSQMLHI 133
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A +A+ + YL + +H DL N L+ NL +GDFG++R
Sbjct: 134 AQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L A E D I+ L
Sbjct: 70 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQAHA-----ERIDHIKLLQ 121
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+I ++ Y IH DL NIL++N +GDFGL ++
Sbjct: 122 YTSQICKGMEYLGTKRY---------IHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 38/199 (19%)
Query: 617 SGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTI----VA 672
SG P++ LR +LK T+ ++G G+FG+VYKG + +G VA
Sbjct: 23 SGTAPNQAQLR----------ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVA 71
Query: 673 IKVLNLQLQG--ASKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNG 730
IK+LN + G A+ F E + ++ H +LVR++ C S Q LV Q MP+G
Sbjct: 72 IKILN-ETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHG 124
Query: 731 SLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSN 790
L ++H E D I + LL + + +A + YL + +H DL N
Sbjct: 125 CLLEYVH--------EHKDNIGSQLLL---NWCVQIAKGMMYLE---ERRLVHRDLAARN 170
Query: 791 ILLDNNLTAHVGDFGLARL 809
+L+ + + DFGLARL
Sbjct: 171 VLVKSPNHVKITDFGLARL 189
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ IRH LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFL----------KGEMGKYLRLPQLVDMAAQIASGM 127
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 128 AYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 16 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 74 EEPI------XIVTEYMSKGSLLDFL----------KGETGKYLRLPQLVDMAAQIASGM 117
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 118 AYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL 153
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 85 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 133
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 134 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 181
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 25 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 84
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 85 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 133
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 134 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 181
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 22/172 (12%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY G + + VA+K L + F E ++ I+
Sbjct: 29 MERTD-ITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 86
Query: 699 HRNLVRVITSCS-SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
H NLV+++ C+ F +V +YMP G+L ++L + +E+ + LL
Sbjct: 87 HPNLVQLLGVCTLEPPFY------IVTEYMPYGNLLDYLR-------ECNREEVTAVVLL 133
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 134 ---YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRL 179
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 275 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 333 EEPIY------IVTEYMSKGSLLDFL----------KGETGKYLRLPQLVDMAAQIASGM 376
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 377 AYVERMNY---VHRDLRAANILVGENLVCKVADFGLARL 412
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 10 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 70 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 118
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 119 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 5 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 64
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 65 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 113
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 114 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 161
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 14 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 73
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 74 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 122
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 123 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 170
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 67 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 115
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 116 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 97
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 98 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 146
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 147 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 194
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 67 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 115
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 116 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 11 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 70
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 71 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 119
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 120 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 167
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 12 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 71
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 72 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 120
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 121 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 168
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 66
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 67 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 115
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 116 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 6 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 65
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 66 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 114
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 115 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 162
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 13 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 72
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 73 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 121
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 122 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 169
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 19 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 77 EEPIY------IVTEYMSKGSLLDFL----------KGETGKYLRLPQLVDMAAQIASGM 120
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 121 AYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL 156
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 28/178 (15%)
Query: 638 LLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTI----VAIKVLNLQLQG--ASKSFAAEC 691
+LK T+ ++G G+FG+VYKG + +G VAIK+LN + G A+ F E
Sbjct: 11 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN-ETTGPKANVEFMDEA 68
Query: 692 RALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEI 751
+ ++ H +LVR++ C S Q LV Q MP+G L ++H E D I
Sbjct: 69 LIMASMDHPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVH--------EHKDNI 114
Query: 752 RNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ LL + + +A + YL + +H DL N+L+ + + DFGLARL
Sbjct: 115 GSQLLL---NWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARL 166
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 250 EEPI------YIVTEYMSKGSLLDFL----------KGETGKYLRLPQLVDMAAQIASGM 293
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 294 AYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 329
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 84 EEPI------YIVIEYMSKGSLLDFL----------KGEMGKYLRLPQLVDMAAQIASGM 127
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 128 AYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQ-----LQGASKSFAAECRALR 695
AT + IG+G++G+VYK G VA+K + + L ++ A R L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
H N+VR++ C++ LV++++ + L +L D P + I++L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL--DKAPPPGLPAETIKDLM 118
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+D+LH +C +H DLKP NIL+ + T + DFGLAR+
Sbjct: 119 R--------QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQ-----LQGASKSFAAECRALR 695
AT + IG+G++G+VYK G VA+K + + L ++ A R L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
H N+VR++ C++ LV++++ + L +L D P + I++L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL--DKAPPPGLPAETIKDLM 118
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+D+LH +C +H DLKP NIL+ + T + DFGLAR+
Sbjct: 119 R--------QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 84 EEPI------YIVIEYMSKGSLLDFL----------KGEMGKYLRLPQLVDMAAQIASGM 127
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 128 AYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFL----------KGEMGKYLRLPQLVDMAAQIASGM 127
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 128 AYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ + T VAIK L + +SF E + ++ ++H LV++ S
Sbjct: 17 LGNGQFGEVWMGTWNGN-TKVAIKTLKPGTM-SPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L ++ E R L L + +A VA+ +
Sbjct: 75 EEPI------YIVTEYMNKGSLLDFL----------KDGEGRALKLPNLVDMAAQVAAGM 118
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ IH DL+ +NIL+ N L + DFGLARL
Sbjct: 119 AYIERMN---YIHRDLRSANILVGNGLICKIADFGLARL 154
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 250 EEPI------YIVTEYMSKGSLLDFL----------KGETGKYLRLPQLVDMAAQIASGM 293
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 294 AYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 329
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 15 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 73 EEPIY------IVTEYMSKGSLLDFL----------KGEMGKYLRLPQLVDMAAQIASGM 116
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 117 AYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL 152
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQ-----LQGASKSFAAECRALR 695
AT + IG+G++G+VYK G VA+K + + L ++ A R L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
H N+VR++ C++ LV++++ + L +L D P + I++L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL--DKAPPPGLPAETIKDLM 118
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+D+LH +C +H DLKP NIL+ + T + DFGLAR+
Sbjct: 119 R--------QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 17 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 75 EEPI------YIVTEYMSKGSLLDFL----------KGEMGKYLRLPQLVDMAAQIASGM 118
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 119 AYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL 154
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS---KSFAAECRALRNI-RHRNLVRV 705
+IG G+FG V K +DG + + ++ + + FA E L + H N++ +
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEE----NDEIRNLTLLERIS 761
+ +C + + L +Y P+G+L ++L + +TD N L+ + +
Sbjct: 92 LGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEV 813
A DVA +DYL Q+ IH DL NIL+ N A + DFGL+R QEV
Sbjct: 147 FAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR-GQEV 194
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 84 EEPI------YIVCEYMSKGSLLDFL----------KGEMGKYLRLPQLVDMAAQIASGM 127
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 128 AYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS---KSFAAECRALRNI-RHRNLVRV 705
+IG G+FG V K +DG + + ++ + + FA E L + H N++ +
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEE----NDEIRNLTLLERIS 761
+ +C + + L +Y P+G+L ++L + +TD N L+ + +
Sbjct: 82 LGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEV 813
A DVA +DYL Q+ IH DL NIL+ N A + DFGL+R QEV
Sbjct: 137 FAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR-GQEV 184
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 192 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 250 EEPI------YIVGEYMSKGSLLDFL----------KGETGKYLRLPQLVDMAAQIASGM 293
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 294 AYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 329
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--------QLQGASKSFAAECR 692
AT + IG+G++G+VYK G VA+K + + L ++ A R
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 693 ALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR 752
L H N+VR++ C++ LV++++ + L +L D P + I+
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL--DKAPPPGLPAETIK 123
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+L +D+LH +C +H DLKP NIL+ + T + DFGLAR+
Sbjct: 124 DLMR--------QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 169
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 84 EEPI------YIVTEYMSKGSLLDFL----------KGEMGKYLRLPQLVDMAAQIASGM 127
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL +NIL+ NL V DFGLARL
Sbjct: 128 AYVERMN---YVHRDLAAANILVGENLVCKVADFGLARL 163
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 28/174 (16%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
F LIG G FG V+K DG IK + + A + E +AL + H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 705 VITSCSSIDFQ---------GNDFKALVYQ--YMPNGSLENWLHPDAIPQTDEENDEIRN 753
D+ + K L Q + G+LE W+ + E+ D++
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK----RRGEKLDKVLA 124
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
L L E+I+ VDY+H + I+ DLKPSNI L + +GDFGL
Sbjct: 125 LELFEQIT------KGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV 169
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + ++ +AS +
Sbjct: 81 EEPI------YIVTEYMNKGSLLDFL----------KGETGKYLRLPQLVDMSAQIASGM 124
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 125 AYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL 160
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM G L ++L + + + L L + + +A +AS +
Sbjct: 84 EEPI------YIVMEYMSKGCLLDFL----------KGEMGKYLRLPQLVDMAAQIASGM 127
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 128 AYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 23 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + ++ +AS +
Sbjct: 81 EEPI------YIVTEYMNKGSLLDFL----------KGETGKYLRLPQLVDMSAQIASGM 124
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 125 AYVERMN---YVHRDLRAANILVGENLVCKVADFGLARL 160
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 8 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 67
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +Y+P GSL ++L + + I ++
Sbjct: 68 SLQHDNIVKYKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQ--------KHKERIDHIK 116
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH +L NIL++N +GDFGL ++
Sbjct: 117 LLQYTS---QICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKV 164
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 25/163 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQ----LQGASKSFAAECRALRNIRHRNLVRVI 706
+G+G+FG V G G VA+K+LN Q L K E + L+ RH +++++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK-IKREIQNLKLFRHPHIIKLY 77
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
S+ DF +V +Y+ G L +++ +E+ L ++I
Sbjct: 78 QVIST----PTDF-FMVMEYVSGGELFDYICKHG------RVEEMEARRLFQQI------ 120
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
SAVDY H H +H DLKP N+LLD ++ A + DFGL+ +
Sbjct: 121 LSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM 160
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 26 LGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM G L ++L + + + L L + + +A +AS +
Sbjct: 84 EEPI------YIVTEYMSKGCLLDFL----------KGEMGKYLRLPQLVDMAAQIASGM 127
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGLARL
Sbjct: 128 AYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 23/162 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI---RHRNLVRVIT 707
+G+G+FG V G G VA+K+LN Q + R ++N+ RH +++++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
S+ DF +V +Y+ G L +++ +E+ L ++I
Sbjct: 79 VIST----PTDF-FMVMEYVSGGELFDYICKHG------RVEEMEARRLFQQI------L 121
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
SAVDY H H +H DLKP N+LLD ++ A + DFGL+ +
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM 160
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 23/163 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 79 QEPIY------IITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 121
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ ++ + IH DL+ +NIL+ + L+ + DFGLARL ++
Sbjct: 122 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 23/163 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 22 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 80 QEPIY------IITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 122
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ ++ + IH DL+ +NIL+ + L+ + DFGLARL ++
Sbjct: 123 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 162
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 23/163 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 79 QEPIY------IITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 121
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ ++ + IH DL+ +NIL+ + L+ + DFGLARL ++
Sbjct: 122 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 23/163 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 16 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 74 QEPIY------IITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 116
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ ++ + IH DL+ +NIL+ + L+ + DFGLARL ++
Sbjct: 117 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 156
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 23/163 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 23 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 81 QEPIY------IITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 123
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ ++ + IH DL+ +NIL+ + L+ + DFGLARL ++
Sbjct: 124 MAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 163
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 26/174 (14%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + + F E L+
Sbjct: 10 FEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK 69
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+++H N+V+ C S G L+ +++P GSL +L + + I ++
Sbjct: 70 SLQHDNIVKYKGVCYSA---GRRNLKLIMEFLPYGSLREYLQ--------KHKERIDHIK 118
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
LL+ S + ++YL + IH DL NIL++N +GDFGL ++
Sbjct: 119 LLQYTS---QICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 23/160 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 27 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 85 QEPI------YIITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 127
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ ++ IH DL+ +NIL+ + L+ + DFGLARL
Sbjct: 128 MAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 164
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 23/160 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 29 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 87 QEPI------YIITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 129
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ ++ IH DL+ +NIL+ + L+ + DFGLARL
Sbjct: 130 MAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 166
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 115 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 159
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + YL + +H DL N +LD T V DFGLAR
Sbjct: 160 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 23/160 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 30 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
+ ++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 88 ------QEPIYIITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 130
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ ++ IH DL+ +NIL+ + L+ + DFGLARL
Sbjct: 131 MAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 167
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 23/160 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 31 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 89 QEPI------YIITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 131
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ ++ IH DL+ +NIL+ + L+ + DFGLARL
Sbjct: 132 MAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 168
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 95 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 139
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + YL + +H DL N +LD T V DFGLAR
Sbjct: 140 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 116 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 160
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + YL + +H DL N +LD T V DFGLAR
Sbjct: 161 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 92 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 136
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + YL + +H DL N +LD T V DFGLAR
Sbjct: 137 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 23/160 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 21 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
+ ++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 79 ------QEPIYIITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 121
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ ++ IH DL+ +NIL+ + L+ + DFGLARL
Sbjct: 122 MAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 158
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 96 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 140
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + YL + +H DL N +LD T V DFGLAR
Sbjct: 141 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 96 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 140
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + YL + +H DL N +LD T V DFGLAR
Sbjct: 141 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 94 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 138
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + YL + +H DL N +LD T V DFGLAR
Sbjct: 139 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 23/160 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 27 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 85 QEPI------YIITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 127
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ ++ IH DL+ +NIL+ + L+ + DFGLARL
Sbjct: 128 MAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 164
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 97 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 141
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + YL + +H DL N +LD T V DFGLAR
Sbjct: 142 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 89 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 133
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + YL + +H DL N +LD T V DFGLAR
Sbjct: 134 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 80/160 (50%), Gaps = 23/160 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 26 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 84 QEPIY------IITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 126
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ ++ IH DL+ +NIL+ + L+ + DFGLARL
Sbjct: 127 MAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARL 163
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 97 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 141
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + YL + +H DL N +LD T V DFGLAR
Sbjct: 142 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS---KSFAAECRALRNI-RHRNLVRV 705
+IG G+FG V K +DG + + ++ + + FA E L + H N++ +
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEE----NDEIRNLTLLERIS 761
+ +C + + L +Y P+G+L ++L + +TD N L+ + +
Sbjct: 89 LGAC-----EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEV 813
A DVA +DYL Q+ IH +L NIL+ N A + DFGL+R QEV
Sbjct: 144 FAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR-GQEV 191
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 29/165 (17%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI---RHRNLVR--- 704
+G+G+FG V G + G VA+K+LN Q + R ++N+ RH ++++
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
VI++ S I +V +Y+ G L +++ + DE + L ++I
Sbjct: 84 VISTPSDI--------FMVMEYVSGGELFDYICKNG------RLDEKESRRLFQQI---- 125
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
S VDY H H +H DLKP N+LLD ++ A + DFGL+ +
Sbjct: 126 --LSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNM 165
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G FG VY+G + + VA+K L + F E ++ I+
Sbjct: 8 MERTD-ITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIK 65
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L + E+ + LL
Sbjct: 66 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR-------ECNRQEVSAVVLL- 112
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 113 --YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 158
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 41/187 (21%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
F LIG G FG V+K DG I+ + + A + E +AL + H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVH 69
Query: 705 VITSCSSIDF---------QGNDF-------------KALVYQ--YMPNGSLENWLHPDA 740
D+ + +D+ K L Q + G+LE W+
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK-- 127
Query: 741 IPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAH 800
+ E+ D++ L L E+I+ VDY+H + IH DLKPSNI L +
Sbjct: 128 --RRGEKLDKVLALELFEQIT------KGVDYIH---SKKLIHRDLKPSNIFLVDTKQVK 176
Query: 801 VGDFGLA 807
+GDFGL
Sbjct: 177 IGDFGLV 183
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ GT++ T VAIK L + ++F E + ++ +RH LV++ S
Sbjct: 193 LGQGCFGEVWMGTWN-GTTRVAIKTLKPG-NMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+V +YM GSL ++L + + + L L + + +A +AS +
Sbjct: 251 EEPI------YIVTEYMSKGSLLDFL----------KGEMGKYLRLPQLVDMAAQIASGM 294
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
Y+ +H DL+ +NIL+ NL V DFGL RL
Sbjct: 295 AYVERM---NYVHRDLRAANILVGENLVCKVADFGLGRL 330
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 11 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 68
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 69 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL- 114
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 115 -LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 161
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 11 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 68
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 69 HPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLR--------ECNRQEVNAVVL- 114
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 115 -LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 161
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKS-FAAECRALRNIRHRNLVRV 705
+G G FG V Y T D G +VA+K L +S + E LR + H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
C QG LV +Y+P GSL ++L P+ ++ L + + A
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYL-----PR--------HSIGLAQLLLFAQQ 125
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YLH + IH +L N+LLDN+ +GDFGLA+
Sbjct: 126 ICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKS-FAAECRALRNIRHRNLVRV 705
+G G FG V Y T D G +VA+K L +S + E LR + H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
C QG LV +Y+P GSL ++L P+ ++ L + + A
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYL-----PR--------HSIGLAQLLLFAQQ 125
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YLH + IH +L N+LLDN+ +GDFGLA+
Sbjct: 126 ICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 156 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 200
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + +L + +H DL N +LD T V DFGLAR
Sbjct: 201 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 12 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 69
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 70 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL- 115
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 116 -LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 162
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 23 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 80
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 81 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL- 126
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 127 -LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 173
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 15 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 72
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 73 HPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLR--------ECNRQEVNAVVL- 118
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 119 -LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 102 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 146
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + +L + +H DL N +LD T V DFGLAR
Sbjct: 147 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 12 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 69
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 70 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL- 115
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 116 -LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 162
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 15 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 72
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 73 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL- 118
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 119 -LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 98 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 142
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + +L + +H DL N +LD T V DFGLAR
Sbjct: 143 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 15 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 72
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 73 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL- 118
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 119 -LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 14 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 71
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 72 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL- 117
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 118 -LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 164
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 10 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 67
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L + E+ + LL
Sbjct: 68 HPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLR-------ECNRQEVSAVVLL- 114
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 115 --YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 15 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 72
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 73 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL- 118
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 119 -LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 98 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 142
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + +L + +H DL N +LD T V DFGLAR
Sbjct: 143 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 12 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 69
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 70 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL- 115
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 116 -LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 162
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 97 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 141
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + +L + +H DL N +LD T V DFGLAR
Sbjct: 142 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 23/163 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 17 LGAGQFGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 75 QEPIY------IITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 117
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ ++ + IH +L+ +NIL+ + L+ + DFGLARL ++
Sbjct: 118 MAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIED 157
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 36/199 (18%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GSG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 1 GSGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV 49
Query: 676 LNLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNG 730
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 50 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFG 103
Query: 731 SLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSN 790
L +++ E D I + LL + + +A ++YL +H DL N
Sbjct: 104 CLLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARN 149
Query: 791 ILLDNNLTAHVGDFGLARL 809
+L+ + DFGLA+L
Sbjct: 150 VLVKTPQHVKITDFGLAKL 168
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 10 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 67
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L + E+ + LL
Sbjct: 68 HPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLR-------ECNRQEVSAVVLL- 114
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 115 --YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 8 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 65
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L + E+ + LL
Sbjct: 66 HPNLVQLLGVCT----REPPFYIII-EFMTYGNLLDYLR-------ECNRQEVSAVVLL- 112
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 113 --YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 158
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 8 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 65
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L + E+ + LL
Sbjct: 66 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR-------ECNRQEVSAVVLL- 112
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 113 --YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 158
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 10 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 67
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L + E+ + LL
Sbjct: 68 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR-------ECNRQEVSAVVLL- 114
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 115 --YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 95 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 139
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + +L + +H DL N +LD T V DFGLAR
Sbjct: 140 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 650 LIGIGSFGSVYKGTF-DRDGTIV--AIKVLN-LQLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G FG VY GT D DG + A+K LN + G F E +++ H N++ +
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ C + +V YM +G L N++ +E N T+ + I +
Sbjct: 97 LGIC----LRSEGSPLVVLPYMKHGDLRNFI-----------RNETHNPTVKDLIGFGLQ 141
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + +L + +H DL N +LD T V DFGLAR
Sbjct: 142 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 15 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 72
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L + E+ + LL
Sbjct: 73 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR-------ECNRQEVSAVVLL- 119
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 120 --YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 10 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIK 67
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L + E+ + LL
Sbjct: 68 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR-------ECNRQEVSAVVLL- 114
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+A ++SA++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 115 --YMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 36/199 (18%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GSG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 24 GSGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV 72
Query: 676 LNLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNG 730
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 73 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFG 126
Query: 731 SLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSN 790
L +++ E D I + LL + + +A ++YL +H DL N
Sbjct: 127 CLLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARN 172
Query: 791 ILLDNNLTAHVGDFGLARL 809
+L+ + DFGLA+L
Sbjct: 173 VLVKTPQHVKITDFGLAKL 191
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 36/199 (18%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GSG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 1 GSGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV 49
Query: 676 LNLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNG 730
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 50 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFG 103
Query: 731 SLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSN 790
L +++ E D I + LL + + +A ++YL +H DL N
Sbjct: 104 CLLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARN 149
Query: 791 ILLDNNLTAHVGDFGLARL 809
+L+ + DFGLA+L
Sbjct: 150 VLVKTPQHVKITDFGLAKL 168
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 650 LIGIGSFGSVYKGTFDR-DGTIVAIKVLNLQLQGASK----SFAAECRALRNIRHRNLVR 704
++G G FGSV +G + DGT + + V ++L +S+ F +E +++ H N++R
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
++ C + QG ++ +M G L +L + +T ++ ++ L + +
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRL-ETGPKHIPLQTL-----LKFMV 154
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
D+A ++YL + +H DL N +L +++T V DFGL++
Sbjct: 155 DIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 24/163 (14%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKS-FAAECRALRNIRHRNLVRV 705
+G G FG V Y T D G +VA+K L +S + E LR + H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
C G LV +Y+P GSL ++L P+ ++ L + + A
Sbjct: 99 KGCCEDA---GAASLQLVMEYVPLGSLRDYL-----PR--------HSIGLAQLLLFAQQ 142
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YLH + IH DL N+LLDN+ +GDFGLA+
Sbjct: 143 ICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 617 SGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL 676
SG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 34 SGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 82
Query: 677 NLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
++L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 83 IMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGC 136
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI 791
L +++ E D I + LL + + +A ++YL +H DL N+
Sbjct: 137 LLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNV 182
Query: 792 LLDNNLTAHVGDFGLARL 809
L+ + DFGLA+L
Sbjct: 183 LVKTPQHVKITDFGLAKL 200
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRV 705
+G G+FG V+ ++D +VA+K L + A + F E L ++H+++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRNLTLLERISI 762
C+ +G +V++YM +G L +L PDA E+ L L + +++
Sbjct: 109 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A VA+ + YL +H DL N L+ L +GDFG++R
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 649 HLIGIGSFGSVYKGTFDRDGT---IVAIKVLNL-QLQGASKSFAAECRALRNIRHRNLVR 704
+IG+G FG V G G VAIK L + F +E + H N++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 705 ---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
V+T C + ++ +YM NGSL+ +L +ND T+++ +
Sbjct: 95 LEGVVTKCKPV--------MIITEYMENGSLDAFLR---------KNDG--RFTVIQLVG 135
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
+ + S + YL +H DL NIL+++NL V DFG++R+ ++ P ++
Sbjct: 136 MLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 192
Query: 822 G 822
G
Sbjct: 193 G 193
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 20/159 (12%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKS-FAAECRALRNIRHRNLVRVITSC 709
IG G+FG V+ G D T+VA+K L K+ F E R L+ H N+VR+I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 710 SSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
+ +V + + G +L E +R TLL+ + D A+
Sbjct: 182 TQ-----KQPIYIVMELVQGGDFLTFLR--------TEGARLRVKTLLQMVG---DAAAG 225
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++YL C IH DL N L+ + DFG++R
Sbjct: 226 MEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 20/159 (12%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKS-FAAECRALRNIRHRNLVRVITSC 709
IG G+FG V+ G D T+VA+K L K+ F E R L+ H N+VR+I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 710 SSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
+ +V + + G +L E +R TLL+ + D A+
Sbjct: 182 TQ-----KQPIYIVMELVQGGDFLTFLR--------TEGARLRVKTLLQMVG---DAAAG 225
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++YL C IH DL N L+ + DFG++R
Sbjct: 226 MEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 649 HLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITS 708
H +G G +G VY+G + + VA+K L + F E ++ I+H NLV+++
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGV 77
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
C+ + F ++ ++M G+L ++L E N + N +L + +A ++S
Sbjct: 78 CT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL--LYMATQISS 122
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
A++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 649 HLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITS 708
H +G G +G VY+G + + VA+K L + F E ++ I+H NLV+++
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-FLKEAAVMKEIKHPNLVQLLGV 77
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
C+ + F ++ ++M G+L ++L E N + N +L + +A ++S
Sbjct: 78 CT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL--LYMATQISS 122
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
A++YL ++ IH DL N L+ N V DFGL+RL
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 636 ESLLKATDGFSSTHLIGIGSFGSVYKGTFDRD----GTIVAIKVLNLQL--QGASKSFAA 689
+ L +A + IG G++G V+K RD G VA+K + +Q +G S
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKA---RDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 690 ECRALRNIR---HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDE 746
E LR++ H N+VR+ C+ LV++++ + L +L D +P+
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL--DKVPEPGV 117
Query: 747 ENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL 806
+ I+++ + +D+LH H +H DLKP NIL+ ++ + DFGL
Sbjct: 118 PTETIKDMMF--------QLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 166
Query: 807 ARL 809
AR+
Sbjct: 167 ARI 169
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 30/185 (16%)
Query: 646 SSTHLIGIGSFGSVYKGTFD----RDGTIVAIKVLNLQLQGASK-SFAAECRALRNIRHR 700
+ +IG G FG VYKG + VAIK L + F E + H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 701 NLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
N++R VI+ + ++ +YM NG+L+ +L E++ E ++L
Sbjct: 107 NIIRLEGVISKYKPM--------MIITEYMENGALDKFLR--------EKDGE---FSVL 147
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQ 817
+ + + +A+ + YL + +H DL NIL+++NL V DFGL+R+ ++ P
Sbjct: 148 QLVGMLRGIAAGMKYLANMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204
Query: 818 SSSVG 822
++ G
Sbjct: 205 YTTSG 209
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 214 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIK 271
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 272 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL- 317
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH +L N L+ N V DFGL+RL
Sbjct: 318 -LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 364
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 649 HLIGIGSFGSVYKGTFDRDGT---IVAIKVLNL-QLQGASKSFAAECRALRNIRHRNLVR 704
+IG+G FG V G G VAIK L + F +E + H N++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 705 ---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
V+T C + ++ +YM NGSL+ +L +ND T+++ +
Sbjct: 74 LEGVVTKCKPV--------MIITEYMENGSLDAFLR---------KNDG--RFTVIQLVG 114
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
+ + S + YL +H DL NIL+++NL V DFG++R+ ++ P ++
Sbjct: 115 MLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
Query: 822 G 822
G
Sbjct: 172 G 172
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 256 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIK 313
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L E N + N +L
Sbjct: 314 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR--------ECNRQEVNAVVL- 359
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A ++SA++YL ++ IH +L N L+ N V DFGL+RL
Sbjct: 360 -LYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 406
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 636 ESLLKATDGFSSTHLIGIGSFGSVYKGTFDRD----GTIVAIKVLNLQL--QGASKSFAA 689
+ L +A + IG G++G V+K RD G VA+K + +Q +G S
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKA---RDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 690 ECRALRNIR---HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDE 746
E LR++ H N+VR+ C+ LV++++ + L +L D +P+
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL--DKVPEPGV 117
Query: 747 ENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL 806
+ I+++ + +D+LH H +H DLKP NIL+ ++ + DFGL
Sbjct: 118 PTETIKDMMF--------QLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 166
Query: 807 ARL 809
AR+
Sbjct: 167 ARI 169
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRV 705
+G G+FG V+ ++D +VA+K L + A + F E L ++H+++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRNLTLLERISI 762
C+ +G +V++YM +G L +L PDA E+ L L + +++
Sbjct: 86 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 763 AIDVASAVDYLH--HHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A VA+ + YL H +H DL N L+ L +GDFG++R
Sbjct: 141 ASQVAAGMVYLAGLHF-----VHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 26/183 (14%)
Query: 636 ESLLKATDGFSSTHLIGIGSFGSVYKGTFDRD----GTIVAIKVLNLQL--QGASKSFAA 689
+ L +A + IG G++G V+K RD G VA+K + +Q +G S
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKA---RDLKNGGRFVALKRVRVQTGEEGMPLSTIR 60
Query: 690 ECRALRNIR---HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDE 746
E LR++ H N+VR+ C+ LV++++ + L +L D +P+
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL--DKVPEPGV 117
Query: 747 ENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL 806
+ I+++ + +D+LH H +H DLKP NIL+ ++ + DFGL
Sbjct: 118 PTETIKDMMF--------QLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGL 166
Query: 807 ARL 809
AR+
Sbjct: 167 ARI 169
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 649 HLIGIGSFGSVYKGTFDRDGT---IVAIKVLNL-QLQGASKSFAAECRALRNIRHRNLVR 704
+IG+G FG V G G VAIK L + F +E + H N++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 705 ---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
V+T C + ++ +YM NGSL+ +L +ND T+++ +
Sbjct: 80 LEGVVTKCKPV--------MIITEYMENGSLDAFLR---------KNDG--RFTVIQLVG 120
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
+ + S + YL +H DL NIL+++NL V DFG++R+ ++ P ++
Sbjct: 121 MLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
Query: 822 G 822
G
Sbjct: 178 G 178
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 23/160 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G G V+ G ++ T VA+K L Q + +F AE ++ ++H+ LVR+ +
Sbjct: 21 LGAGQAGEVWMGYYN-GHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLH-PDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
+ ++ +YM NGSL ++L P I LT+ + + +A +A
Sbjct: 79 ------QEPIYIITEYMENGSLVDFLKTPSGI-----------KLTINKLLDMAAQIAEG 121
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ ++ IH DL+ +NIL+ + L+ + DFGLARL
Sbjct: 122 MAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARL 158
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 20/168 (11%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRV 705
+G G+FG V+ ++D +VA+K L + A + F E L ++H+++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRNLTLLERISI 762
C+ +G +V++YM +G L +L PDA E+ L L + +++
Sbjct: 80 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 763 AIDVASAVDYLH--HHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A VA+ + YL H +H DL N L+ L +GDFG++R
Sbjct: 135 ASQVAAGMVYLAGLHF-----VHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 36/200 (18%)
Query: 615 GGSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIK 674
G G+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I
Sbjct: 1 GAMGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP 49
Query: 675 VLNLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPN 729
V +L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPF 103
Query: 730 GSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPS 789
G L +++ E D I + LL + + +A ++YL +H DL
Sbjct: 104 GCLLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAAR 149
Query: 790 NILLDNNLTAHVGDFGLARL 809
N+L+ + DFGLA+L
Sbjct: 150 NVLVKTPQHVKITDFGLAKL 169
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 36/200 (18%)
Query: 615 GGSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIK 674
G G+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I
Sbjct: 1 GSMGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP 49
Query: 675 VLNLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPN 729
V +L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LIMQLMPF 103
Query: 730 GSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPS 789
G L +++ E D I + LL + + +A ++YL +H DL
Sbjct: 104 GCLLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAAR 149
Query: 790 NILLDNNLTAHVGDFGLARL 809
N+L+ + DFGLA+L
Sbjct: 150 NVLVKTPQHVKITDFGLAKL 169
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V +YM NGSL+++L DA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLRKHDA---------- 142
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGLAR+
Sbjct: 143 --QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLARVL 197
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 198 EDDPEAAYTTRG 209
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 36/200 (18%)
Query: 615 GGSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIK 674
G G+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I
Sbjct: 1 GAMGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP 49
Query: 675 VLNLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPN 729
V +L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPF 103
Query: 730 GSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPS 789
G L +++ E D I + LL + + +A ++YL +H DL
Sbjct: 104 GCLLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAAR 149
Query: 790 NILLDNNLTAHVGDFGLARL 809
N+L+ + DFGLA+L
Sbjct: 150 NVLVKTPQHVKITDFGLAKL 169
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 25/169 (14%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNIRH 699
D F +G G FG+VY ++ I+A+KVL L+ +G E ++RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
N++R+ F L+ ++ P G L L Q DE R+ T +E
Sbjct: 74 PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKEL------QKHGRFDEQRSATFMEE 122
Query: 760 ISIAIDVASAVDYLHHHCQE-PTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++ A+ H+C E IH D+KP N+L+ + DFG +
Sbjct: 123 LADAL----------HYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 36/198 (18%)
Query: 617 SGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL 676
SG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 4 SGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 52
Query: 677 NLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 53 IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGC 106
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI 791
L +++ E D I + LL + + +A ++YL +H DL N+
Sbjct: 107 LLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNV 152
Query: 792 LLDNNLTAHVGDFGLARL 809
L+ + DFGLA+L
Sbjct: 153 LVKTPQHVKITDFGLAKL 170
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
SG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 5 ASGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV 53
Query: 676 LNLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNG 730
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 54 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFG 107
Query: 731 SLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSN 790
L +++ E D I + LL + + +A ++YL +H DL N
Sbjct: 108 CLLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARN 153
Query: 791 ILLDNNLTAHVGDFGLARL 809
+L+ + DFGLA+L
Sbjct: 154 VLVKTPQHVKITDFGLAKL 172
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GSG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 1 GSGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV 49
Query: 676 LNLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNG 730
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 50 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFG 103
Query: 731 SLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSN 790
L +++ E D I + LL + + +A ++YL +H DL N
Sbjct: 104 CLLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARN 149
Query: 791 ILLDNNLTAHVGDFGLARL 809
+L+ + DFG A+L
Sbjct: 150 VLVKTPQHVKITDFGRAKL 168
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 36/198 (18%)
Query: 617 SGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL 676
SG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 1 SGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 49
Query: 677 NLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 50 IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGC 103
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI 791
L +++ E D I + LL + + +A ++YL +H DL N+
Sbjct: 104 LLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNV 149
Query: 792 LLDNNLTAHVGDFGLARL 809
L+ + DFGLA+L
Sbjct: 150 LVKTPQHVKITDFGLAKL 167
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GSG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 1 GSGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV 49
Query: 676 LNLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNG 730
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 50 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFG 103
Query: 731 SLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSN 790
L +++ E D I + LL + + +A ++YL +H DL N
Sbjct: 104 CLLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARN 149
Query: 791 ILLDNNLTAHVGDFGLARL 809
+L+ + DFG A+L
Sbjct: 150 VLVKTPQHVKITDFGRAKL 168
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKS-FAAECRALRNIRHRNLVRV 705
+G G FG V Y T D G +VA+K L +S + E LR + H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
C QG LV +Y+P GSL ++L + L + + A
Sbjct: 76 KGCCED---QGEKSVQLVMEYVPLGSLRDYLPRHCV-------------GLAQLLLFAQQ 119
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YLH + IH L N+LLDN+ +GDFGLA+
Sbjct: 120 ICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKS-FAAECRALRNIRHRNLVRV 705
+G G FG V Y T D G +VA+K L +S + E LR + H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
C QG LV +Y+P GSL ++L + L + + A
Sbjct: 77 KGCCED---QGEKSVQLVMEYVPLGSLRDYLPRHCV-------------GLAQLLLFAQQ 120
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YLH + IH L N+LLDN+ +GDFGLA+
Sbjct: 121 ICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 36/198 (18%)
Query: 617 SGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL 676
SG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 1 SGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 49
Query: 677 NLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 50 IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGX 103
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI 791
L +++ E D I + LL + + +A ++YL +H DL N+
Sbjct: 104 LLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNV 149
Query: 792 LLDNNLTAHVGDFGLARL 809
L+ + DFGLA+L
Sbjct: 150 LVKTPQHVKITDFGLAKL 167
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 36/200 (18%)
Query: 615 GGSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIK 674
G G+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I
Sbjct: 1 GSMGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIP 49
Query: 675 VLNLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPN 729
V +L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP
Sbjct: 50 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPF 103
Query: 730 GSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPS 789
G L +++ E D I + LL + + +A ++YL +H DL
Sbjct: 104 GCLLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAAR 149
Query: 790 NILLDNNLTAHVGDFGLARL 809
N+L+ + DFGLA+L
Sbjct: 150 NVLVKTPQHVKITDFGLAKL 169
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 36/198 (18%)
Query: 617 SGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL 676
SG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 7 SGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 55
Query: 677 NLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 56 IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGC 109
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI 791
L +++ E D I + LL + + +A ++YL +H DL N+
Sbjct: 110 LLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNV 155
Query: 792 LLDNNLTAHVGDFGLARL 809
L+ + DFGLA+L
Sbjct: 156 LVKTPQHVKITDFGLAKL 173
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TD + H +G G +G VY+G + + VA+K L + F E ++ I+
Sbjct: 217 MERTD-ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIK 274
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H NLV+++ C+ + F ++ ++M G+L ++L + E+ + LL
Sbjct: 275 HPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLR-------ECNRQEVSAVVLL- 321
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+A ++SA++YL ++ IH +L N L+ N V DFGL+RL
Sbjct: 322 --YMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRL 367
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GSG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 1 GSGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV 49
Query: 676 LNLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNG 730
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 50 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFG 103
Query: 731 SLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSN 790
L +++ E D I + LL + + +A ++YL +H DL N
Sbjct: 104 CLLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARN 149
Query: 791 ILLDNNLTAHVGDFGLARL 809
+L+ + DFG A+L
Sbjct: 150 VLVKTPQHVKITDFGRAKL 168
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 25/169 (14%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNIRH 699
D F +G G FG+VY ++ I+A+KVL L+ +G E ++RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
N++R+ F L+ ++ P G L L Q DE R+ T +E
Sbjct: 75 PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKEL------QKHGRFDEQRSATFMEE 123
Query: 760 ISIAIDVASAVDYLHHHCQE-PTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++ A+ H+C E IH D+KP N+L+ + DFG +
Sbjct: 124 LADAL----------HYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 162
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 25/169 (14%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNIRH 699
D F +G G FG+VY ++ I+A+KVL L+ +G E ++RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
N++R+ F L+ ++ P G L L Q DE R+ T +E
Sbjct: 74 PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKEL------QKHGRFDEQRSATFMEE 122
Query: 760 ISIAIDVASAVDYLHHHCQE-PTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++ A+ H+C E IH D+KP N+L+ + DFG +
Sbjct: 123 LADAL----------HYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 161
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 30 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V +YM NGSL+++L DA
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLRKHDA---------- 130
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGL+R+
Sbjct: 131 --QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 185
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 186 EDDPEAAYTTRG 197
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 26/154 (16%)
Query: 281 GSGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDH 340
GS E + + ++ CSN KG ++ IP ++ +L +D
Sbjct: 1 GSRCPTECTCLDTVVRCSN-----------KGL---KVLPKGIPRDVTELY------LDG 40
Query: 341 NQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLG 400
NQF +P+E+S ++L +++ +N++S SF N++ L+ LIL N L + P +
Sbjct: 41 NQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFD 99
Query: 401 NLKQLALLHLFQNDLSGAIPEEIFN----ISHMS 430
LK L LL L ND+S +PE FN +SH++
Sbjct: 100 GLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLA 132
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 109 LYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNI 168
LYL N+ +P E + +L + + N ++ N+T L + L+YN L
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 94
Query: 169 PSSLGQLKELKSLGLGG----TIPPSIYN-LSLLANFSVPEN 205
P + LK L+ L L G +P +N LS L++ ++ N
Sbjct: 95 PRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGAN 136
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V +YM NGSL+++L DA
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLRKHDA---------- 113
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGL+R+
Sbjct: 114 --QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 168
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 169 EDDPEAAYTTRG 180
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V +YM NGSL+++L DA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLRKHDA---------- 142
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGL+R+
Sbjct: 143 --QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 198 EDDPEAAYTTRG 209
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V +YM NGSL+++L DA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLRKHDA---------- 142
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGL+R+
Sbjct: 143 --QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 198 EDDPEAAYTTRG 209
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V +YM NGSL+++L DA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLRKHDA---------- 142
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGL+R+
Sbjct: 143 --QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 198 EDDPEAAYTTRG 209
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 40 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V +YM NGSL+++L DA
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLRKHDA---------- 140
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGL+R+
Sbjct: 141 --QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 195
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 196 EDDPEAAYTTRG 207
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V +YM NGSL+++L DA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLRKHDA---------- 142
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGL+R+
Sbjct: 143 --QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 198 EDDPEAAYTTRG 209
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V +YM NGSL+++L DA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLRKHDA---------- 142
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGL R+
Sbjct: 143 --QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVL 197
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 198 EDDPEAAYTTRG 209
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK---SFAAECRALRNIRHRN 701
+ +G GSFG V G VA+K++N ++ S E LR +RH +
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
++++ S D +V +Y N D I Q D+ +++ E
Sbjct: 76 IIKLYDVIKS-----KDEIIMVIEYAGNELF------DYIVQRDKMSEQ-------EARR 117
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ SAV+Y H H +H DLKP N+LLD +L + DFGL+ +
Sbjct: 118 FFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNI 162
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK---SFAAECRALRNIRHRN 701
+ +G GSFG V G VA+K++N ++ S E LR +RH +
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
++++ S D +V +Y N D I Q D+ +++ E
Sbjct: 75 IIKLYDVIKS-----KDEIIMVIEYAGNELF------DYIVQRDKMSEQ-------EARR 116
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ SAV+Y H H +H DLKP N+LLD +L + DFGL+ +
Sbjct: 117 FFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNI 161
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK---SFAAECRALRNIRHRN 701
+ +G GSFG V G VA+K++N ++ S E LR +RH +
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
++++ S D +V +Y N D I Q D+ +++ E
Sbjct: 66 IIKLYDVIKS-----KDEIIMVIEYAGNELF------DYIVQRDKMSEQ-------EARR 107
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ SAV+Y H H +H DLKP N+LLD +L + DFGL+ +
Sbjct: 108 FFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNI 152
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V +YM NGSL+++L DA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEYMENGSLDSFLRKHDA---------- 142
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGL+R+
Sbjct: 143 --QFTVIQLVGMLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 198 EDDPEAAYTTRG 209
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR---VIT 707
+G G FG V+ G ++ + T VA+K L ++F E ++ ++H LVR V+T
Sbjct: 21 LGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
I ++ +YM GSL ++L ++DE + L + I + +A
Sbjct: 79 REEPI--------YIITEYMAKGSLLDFL----------KSDEGGKVLLPKLIDFSAQIA 120
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ Y+ ++ IH DL+ +N+L+ +L + DFGLAR+
Sbjct: 121 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARV 159
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 36/197 (18%)
Query: 618 GKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN 677
G+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 1 GEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI 49
Query: 678 LQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL 732
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G L
Sbjct: 50 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCL 103
Query: 733 ENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNIL 792
+++ E D I + LL + + +A ++YL +H DL N+L
Sbjct: 104 LDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 793 LDNNLTAHVGDFGLARL 809
+ + DFGLA+L
Sbjct: 150 VKTPQHVKITDFGLAKL 166
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 36/197 (18%)
Query: 618 GKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN 677
G+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 1 GEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI 49
Query: 678 LQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL 732
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G L
Sbjct: 50 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCL 103
Query: 733 ENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNIL 792
+++ E D I + LL + + +A ++YL +H DL N+L
Sbjct: 104 LDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 793 LDNNLTAHVGDFGLARL 809
+ + DFGLA+L
Sbjct: 150 VKTPQHVKITDFGLAKL 166
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK---SFAAECRALRNIRHRN 701
+ +G GSFG V G VA+K++N ++ S E LR +RH +
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
++++ S D +V +Y N D I Q D+ +++ E
Sbjct: 70 IIKLYDVIKS-----KDEIIMVIEYAGNELF------DYIVQRDKMSEQ-------EARR 111
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ SAV+Y H H +H DLKP N+LLD +L + DFGL+ +
Sbjct: 112 FFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNI 156
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 34/170 (20%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
F+ IG GSFG V+KG +R +VAIK+++L+ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 57
Query: 705 VITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
V++ C S + G+ K ++ +Y+ GS + L P + DE + T+L
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL-------DETQIATIL 110
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++ +DYLH E IH D+K +N+LL + + DFG+A
Sbjct: 111 R------EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGAS-KSFAAECRALRNIRHRNLVRV 705
+G G FG V Y D G VA+K L + G E LRN+ H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
C+ + GN K L+ +++P+GSL+ +L + + L +++ A+
Sbjct: 89 KGICT--EDGGNGIK-LIMEFLPSGSLKEYLPKNK-----------NKINLKQQLKYAVQ 134
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +DYL +H DL N+L+++ +GDFGL +
Sbjct: 135 ICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTK 174
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 34/170 (20%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
F+ IG GSFG V+KG +R +VAIK+++L+ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 57
Query: 705 VITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
V++ C S + G+ K ++ +Y+ GS + L P + DE + T+L
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL-------DETQIATIL 110
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++ +DYLH E IH D+K +N+LL + + DFG+A
Sbjct: 111 R------EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 36/197 (18%)
Query: 618 GKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN 677
G+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 1 GEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI 49
Query: 678 LQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL 732
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G L
Sbjct: 50 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCL 103
Query: 733 ENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNIL 792
+++ E D I + LL + + +A ++YL +H DL N+L
Sbjct: 104 LDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 793 LDNNLTAHVGDFGLARL 809
+ + DFGLA+L
Sbjct: 150 VKTPQHVKITDFGLAKL 166
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGAS-KSFAAECRALRNIRHRNLVRV 705
+G G FG V Y D G VA+K L + G E LRN+ H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
C+ + GN K L+ +++P+GSL+ +L P+ + + L +++ A+
Sbjct: 77 KGICT--EDGGNGIK-LIMEFLPSGSLKEYL-----PKNKNK------INLKQQLKYAVQ 122
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +DYL +H DL N+L+++ +GDFGL +
Sbjct: 123 ICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTK 162
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 34/170 (20%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
F+ IG GSFG V+KG +R +VAIK+++L+ + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 77
Query: 705 VITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
V++ C S + G+ K ++ +Y+ GS + L P + DE + T+L
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL-------DETQIATIL 130
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
I +DYLH E IH D+K +N+LL + + DFG+A
Sbjct: 131 REI------LKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 34/170 (20%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
F+ IG GSFG V+KG +R +VAIK+++L+ + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-----------QQEIT 72
Query: 705 VITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
V++ C S + G+ K ++ +Y+ GS + L P + DE + T+L
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL-------DETQIATIL 125
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++ +DYLH E IH D+K +N+LL + + DFG+A
Sbjct: 126 R------EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 36/197 (18%)
Query: 618 GKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN 677
G+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 1 GEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI 49
Query: 678 LQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL 732
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G L
Sbjct: 50 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGXL 103
Query: 733 ENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNIL 792
+++ E D I + LL + + +A ++YL +H DL N+L
Sbjct: 104 LDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 793 LDNNLTAHVGDFGLARL 809
+ + DFGLA+L
Sbjct: 150 VKTPQHVKITDFGLAKL 166
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 649 HLIGIGSFGSVYKGTFDRDGT---IVAIKVLNL-QLQGASKSFAAECRALRNIRHRNLVR 704
+IG G FG V G G VAIK L + + + F E + H N++
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 705 ---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
V+T + +V +YM NGSL+ +L + D + I+ + +L IS
Sbjct: 88 LEGVVTKSKPV--------MIVTEYMENGSLDTFLK-----KNDGQFTVIQLVGMLRGIS 134
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
+ S + Y+H DL NIL+++NL V DFGL+R+ ++ P ++
Sbjct: 135 AGMKYLSDMGYVHR---------DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 185
Query: 822 G 822
G
Sbjct: 186 G 186
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 26/165 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR---VIT 707
+G G FG V+ G ++ + T VA+K L ++F E ++ ++H LVR V+T
Sbjct: 20 LGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
I ++ ++M GSL ++L ++DE + L + I + +A
Sbjct: 78 KEEPI--------YIITEFMAKGSLLDFL----------KSDEGGKVLLPKLIDFSAQIA 119
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ Y+ ++ IH DL+ +N+L+ +L + DFGLAR+ ++
Sbjct: 120 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIED 161
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSC 709
++G G+FG V K + VAIK ++ + K+F E R L + H N+V++ +C
Sbjct: 15 VVGRGAFGVVCKAKWRAKD--VAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 710 SSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
+ LV +Y GSL N LH + + T +S + +
Sbjct: 71 L-------NPVCLVMEYAEGGSLYNVLH---------GAEPLPYYTAAHAMSWCLQCSQG 114
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLA-RLRQEVPNNQSSSV 821
V YLH + IH DLKP N+LL T + DFG A ++ + NN+ S+
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA 168
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSC 709
++G G+FG V K + VAIK ++ + K+F E R L + H N+V++ +C
Sbjct: 16 VVGRGAFGVVCKAKWRAKD--VAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 710 SSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
+ LV +Y GSL N LH + + T +S + +
Sbjct: 72 L-------NPVCLVMEYAEGGSLYNVLH---------GAEPLPYYTAAHAMSWCLQCSQG 115
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLA-RLRQEVPNNQSSSV 821
V YLH + IH DLKP N+LL T + DFG A ++ + NN+ S+
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA 169
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V G + R VAIK++ + + F E + + N+ H LV++ C+
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
Q F ++ +YM NG L N+L E + LLE + DV A+
Sbjct: 90 K---QRPIF--IITEYMANGCLLNYLR--------EMRHRFQTQQLLE---MCKDVCEAM 133
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
+YL + +H DL N L+++ V DFGL+R + + ++SSVG
Sbjct: 134 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEETSSVG 180
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 36/198 (18%)
Query: 617 SGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL 676
SG+ P++ +LR +LK T+ F ++ G+FG+VYKG + +G V I V
Sbjct: 7 SGEAPNQALLR----------ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVA 55
Query: 677 NLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 56 IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGC 109
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI 791
L +++ E D I + LL + + +A ++YL +H DL N+
Sbjct: 110 LLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNV 155
Query: 792 LLDNNLTAHVGDFGLARL 809
L+ + DFGLA+L
Sbjct: 156 LVKTPQHVKITDFGLAKL 173
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 71/173 (41%), Gaps = 26/173 (15%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRN--IRHR 700
D LIG G +G+VYKG+ D VA+KV + ++F E R + H
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDE--RPVAVKVFSF---ANRQNFINEKNIYRVPLMEHD 67
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+ R I + G LV +Y PNGSL +L + +
Sbjct: 68 NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-------------SLHTSDWVSSC 114
Query: 761 SIAIDVASAVDYLH------HHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+A V + YLH H + H DL N+L+ N+ T + DFGL+
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 79/164 (48%), Gaps = 21/164 (12%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ T+++ T VA+K + ++F AE ++ ++H LV++ +
Sbjct: 190 LGAGQFGEVWMATYNKH-TKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
++ ++M GSL ++L ++DE L + I + +A +
Sbjct: 248 KEPIY------IITEFMAKGSLLDFL----------KSDEGSKQPLPKLIDFSAQIAEGM 291
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVP 814
++ Q IH DL+ +NIL+ +L + DFGLAR+ + P
Sbjct: 292 AFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFP 332
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 36/198 (18%)
Query: 617 SGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL 676
SG+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 7 SGEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVA 55
Query: 677 NLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 56 IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGC 109
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI 791
L +++ E D I + LL + + +A ++YL +H DL N+
Sbjct: 110 LLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNV 155
Query: 792 LLDNNLTAHVGDFGLARL 809
L+ + DFG A+L
Sbjct: 156 LVKTPQHVKITDFGRAKL 173
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 36/198 (18%)
Query: 617 SGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL 676
SG+ P++ +LR +LK T+ F ++ G+FG+VYKG + +G V I V
Sbjct: 7 SGEAPNQALLR----------ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVA 55
Query: 677 NLQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G
Sbjct: 56 IKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGC 109
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI 791
L +++ E D I + LL + + +A ++YL +H DL N+
Sbjct: 110 LLDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNV 155
Query: 792 LLDNNLTAHVGDFGLARL 809
L+ + DFGLA+L
Sbjct: 156 LVKTPQHVKITDFGLAKL 173
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 627 RRALRKVSYESLLKATDG-FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK 685
RR L+K+ +SL K + F +G GS+GSVYK G IVAI K
Sbjct: 12 RRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAI-----------K 60
Query: 686 SFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFK----ALVYQYMPNGSLENWLHPDAI 741
E I+ ++++ S + + G+ FK +V +Y GS+ + +
Sbjct: 61 QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR---- 116
Query: 742 PQTDEENDEIRNLTLLER--ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA 799
+RN TL E +I ++YLH + IH D+K NILL+ A
Sbjct: 117 ---------LRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHA 164
Query: 800 HVGDFGLA 807
+ DFG+A
Sbjct: 165 KLADFGVA 172
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 26/177 (14%)
Query: 638 LLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS-----KSFAAECR 692
+LK T+ F ++G G+FG+VYKG + +G V I V +L+ A+ K E
Sbjct: 21 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 693 ALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR 752
+ ++ + ++ R++ C + Q L+ Q MP G L +++ E D I
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR--------EHKDNIG 125
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ LL + + +A ++YL +H DL N+L+ + DFGLA+L
Sbjct: 126 SQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 176
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 17/175 (9%)
Query: 255 NFFGKLSVNFGDMKS---LAYL-NVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQF 310
N ++ N D+KS + YL NV LG + ++S + L +NL++L L NQ
Sbjct: 41 NSIDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDISALKEL---TNLTYLILTGNQL 97
Query: 311 KGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGE 370
+ +LP+ + KL +L + + NQ + +L NL +LN+ HNQL
Sbjct: 98 Q-SLPNGV--------FDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSL 148
Query: 371 IPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFN 425
F L++L +L L N L + L QL L L+QN L ++P+ +F+
Sbjct: 149 PKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFD 202
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%)
Query: 55 LSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRN 114
L+ L+E+ L N +Q G +L L L L+HN L G + L L L N
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYN 167
Query: 115 KLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNIP 169
+L+ F L LK+L + +N L +TSL+ I L N P
Sbjct: 168 QLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 28/167 (16%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGS---GESDEMSFIHSLA 295
F +NL+ L ++ N F + +L YLN+A N L S G D++
Sbjct: 104 VFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKL------- 156
Query: 296 NCSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQ 355
+NL+ L+L NQ + +LP + KL L + + NQ + RL
Sbjct: 157 --TNLTELDLSYNQLQ-SLPEGV--------FDKLTQLKDLRLYQNQLKSVPDGVFDRLT 205
Query: 356 NLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNL 402
+LQ++ + N P LS + N SGV+ +S G++
Sbjct: 206 SLQYIWLHDNPWDCTCP-GIRYLSEWI------NKHSGVVRNSAGSV 245
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Query: 100 LSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISL 159
L + L L L N+L+ F L NLKEL + EN L +T+L ++L
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140
Query: 160 AYNSLGGNIPSSLGQLKELKSLGLG----GTIPPSIYN-LSLLANFSVPENR 206
A+N L +L L L L ++P +++ L+ L + + +N+
Sbjct: 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Query: 76 IGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAI 135
+ L L L L+ N L G + L L L N+L+ F L NL L +
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140
Query: 136 QENNLTGGIPHFLGNITSLEAISLAYN---SLGGNIPSSLGQLKELK 179
N L +T+L + L+YN SL + L QLK+L+
Sbjct: 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 26/177 (14%)
Query: 638 LLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS-----KSFAAECR 692
+LK T+ F ++G G+FG+VYKG + +G V I V +L+ A+ K E
Sbjct: 8 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 693 ALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR 752
+ ++ + ++ R++ C + Q L+ Q MP G L +++ E D I
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR--------EHKDNIG 112
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ LL + + +A ++YL +H DL N+L+ + DFGLA+L
Sbjct: 113 SQYLL---NWCVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 163
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 26/177 (14%)
Query: 638 LLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS-----KSFAAECR 692
+LK T+ F ++G G+FG+VYKG + +G V I V +L+ A+ K E
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 693 ALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR 752
+ ++ + ++ R++ C + Q L+ Q MP G L +++ E D I
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVR--------EHKDNIG 109
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ LL + + +A ++YL +H DL N+L+ + DFGLA+L
Sbjct: 110 SQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 160
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 89/183 (48%), Gaps = 31/183 (16%)
Query: 649 HLIGIGSFGSVYKGTFDRDG---TIVAIKVLNL-QLQGASKSFAAECRALRNIRHRNLVR 704
+IG G FG V +G G + VAIK L + + F +E + H N++R
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 705 ---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
V+T+ + ++ ++M NG+L+++L ND T+++ +
Sbjct: 82 LEGVVTNSMPV--------MILTEFMENGALDSFLR---------LNDG--QFTVIQLVG 122
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNN--QSS 819
+ +AS + YL + +H DL NIL+++NL V DFGL+R +E ++ ++S
Sbjct: 123 MLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETS 179
Query: 820 SVG 822
S+G
Sbjct: 180 SLG 182
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 23/172 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V G + R VAIK++ + + F E + + N+ H LV++ C+
Sbjct: 32 LGTGQFGVVKYGKW-RGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
Q F ++ +YM NG L N+L E + LLE + DV A+
Sbjct: 90 K---QRPIF--IITEYMANGCLLNYLR--------EMRHRFQTQQLLE---MCKDVCEAM 133
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
+YL + +H DL N L+++ V DFGL+R + + +SSVG
Sbjct: 134 EYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV--LDDEYTSSVG 180
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 21/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ T+++ T VA+K + ++F AE ++ ++H LV++ +
Sbjct: 196 LGAGQFGEVWMATYNKH-TKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
++ ++M GSL ++L ++DE L + I + +A +
Sbjct: 254 KEPIY------IITEFMAKGSLLDFL----------KSDEGSKQPLPKLIDFSAQIAEGM 297
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ Q IH DL+ +NIL+ +L + DFGLAR+
Sbjct: 298 AFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARV 333
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V + M NGSL+++L DA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEXMENGSLDSFLRKHDA---------- 142
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGL+R+
Sbjct: 143 --QFTVIQLVGMLRGIASGMKYLSDMG---AVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 198 EDDPEAAYTTRG 209
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 152/353 (43%), Gaps = 60/353 (16%)
Query: 79 LFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQEN 138
L L + S+N L P L ++L+ + + N++ P +L NL L + N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 139 NLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLA 198
+T P L N+T+L + L+ N++ S+L L L+ L G + +L LA
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFGN----QVTDLKPLA 169
Query: 199 NFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNFFG 258
N + E IS+N S LA +NL+SL I NN
Sbjct: 170 NLTTLER-------------------LDISSNKVSDISVLA--KLTNLESL-IATNNQIS 207
Query: 259 KLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSI 318
++ G + +L L S +++ I +LA+ +NL+ L+L NQ P S
Sbjct: 208 DITP-LGILTNLDEL--------SLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSG 258
Query: 319 VSGSIPSEIGK-----------LVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQL 367
++ ++G L +L +E++ NQ E P +S L+NL +L + N +
Sbjct: 259 LTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNI 316
Query: 368 SGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP 420
S P S +L+ L +L NN +S V SSL NL + L N +S P
Sbjct: 317 SDISPVS--SLTKLQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 365
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 114/282 (40%), Gaps = 57/282 (20%)
Query: 306 VANQFKGALPHSIVSGSIP-SEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRH 364
+A + K L + V+ ++ +++ ++ +L + +G + L NL +N +
Sbjct: 18 LAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSN 72
Query: 365 NQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP---- 420
NQL+ P NL+ LV +++ NN ++ + P L NL L L LF N ++ P
Sbjct: 73 NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLKNL 128
Query: 421 ----------EEIFNISHMS-----DSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLS 465
I +IS +S LNF V + P + NL L +SSN +S
Sbjct: 129 TNLNRLELSSNTISDISALSGLTSLQQLNFGNQ--VTDLKP-LANLTTLERLDISSNKVS 185
Query: 466 GEIPSEIGSCFYLQEIYMAENFFRGSIP--------------------SSLVSLKDLREI 505
S + L+ + N P +L SL +L ++
Sbjct: 186 D--ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL 243
Query: 506 DLSQNNLSGKIPIS-LERLPLEYLNLSFNDLEGQVPTKGIFA 546
DL+ N +S P+S L + L L L N + P G+ A
Sbjct: 244 DLANNQISNLAPLSGLTK--LTELKLGANQISNISPLAGLTA 283
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 29/252 (11%)
Query: 286 DEMSFIHSLANCSNLSFLNLVANQFKGALP--------HSIVSGSIPSEIGKLVSLYLIE 337
++++ I LAN +NL+ L L NQ P +S + S+I L L ++
Sbjct: 95 NQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQ 154
Query: 338 MDH--NQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVI 395
+ NQ P ++ L L+ L++ N++S S L++L LI NN +S +
Sbjct: 155 QLNFGNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDIT 210
Query: 396 PSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLR 455
P LG L L L L N L + ++++++D L+ A N + P + L L
Sbjct: 211 P--LGILTNLDELSLNGNQLKDI--GTLASLTNLTD-LDLANNQISNLAP--LSGLTKLT 263
Query: 456 MFVVSSNNLSGEIPSEIGSCFYLQEIYMAENFFRGSIPSSLVSLKDLREIDLSQNNLSGK 515
+ +N +S P + L + + EN P S +LK+L + L NN+S
Sbjct: 264 ELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISDI 319
Query: 516 IPIS----LERL 523
P+S L+RL
Sbjct: 320 SPVSSLTKLQRL 331
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 128/313 (40%), Gaps = 31/313 (9%)
Query: 18 HFCDWEGITCSPRHRRVTVLD-LKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEI 76
+F + + +P ++D L + I ++P + NL+ L + L NN I P +
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--L 125
Query: 77 GRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQ 136
L L L LS N+ + +I LS + L L G N++ P +L L+ L I
Sbjct: 126 KNLTNLNRLELSSNT-ISDISA-LSGLTSLQQLNFG-NQVTDLKP--LANLTTLERLDIS 180
Query: 137 ENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSL 196
N ++ L +T+LE++ N + P LG L L L L G I L+
Sbjct: 181 SNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLAS 236
Query: 197 LANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNF 256
L N + + ++ N S PLA A L +LE L N
Sbjct: 237 LTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTA--LTNLE-LNENQ 293
Query: 257 FGKLSVNFGDMKSLAYLNVAINNLGS--------------GESDEMSFIHSLANCSNLSF 302
+S ++K+L YL + NN+ ++++S + SLAN +N+++
Sbjct: 294 LEDISP-ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTNINW 352
Query: 303 LNLVANQFKGALP 315
L+ NQ P
Sbjct: 353 LSAGHNQISDLTP 365
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 153/353 (43%), Gaps = 60/353 (16%)
Query: 79 LFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQEN 138
L L + S+N L P L ++L+ + + N++ P +L NL L + N
Sbjct: 66 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 121
Query: 139 NLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLA 198
+T P L N+T+L + L+ N++ S+L L L+ L G + +L LA
Sbjct: 122 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGN----QVTDLKPLA 173
Query: 199 NFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNFFG 258
N + E IS+N S LA +NL+SL I NN
Sbjct: 174 NLTTLER-------------------LDISSNKVSDISVLA--KLTNLESL-IATNNQIS 211
Query: 259 KLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSI 318
++ G + +L L++ +++ I +LA+ +NL+ L+L NQ P S
Sbjct: 212 DITP-LGILTNLDELSL--------NGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSG 262
Query: 319 VSGSIPSEIGK-----------LVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQL 367
++ ++G L +L +E++ NQ E P +S L+NL +L + N +
Sbjct: 263 LTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNI 320
Query: 368 SGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP 420
S P S +L+ L +L NN +S V SSL NL + L N +S P
Sbjct: 321 SDISPVS--SLTKLQRLFFANNKVSDV--SSLANLTNINWLSAGHNQISDLTP 369
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 34/251 (13%)
Query: 299 NLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQ 358
NL+ +N NQ P + L L I M++NQ P ++ L NL
Sbjct: 68 NLTQINFSNNQLTDITP-----------LKNLTKLVDILMNNNQIADITP--LANLTNLT 114
Query: 359 FLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIP-SSLGNLKQLALLHLFQNDLSG 417
L + +NQ++ P NL++L +L L +N +S + S L +L+QL+ F N ++
Sbjct: 115 GLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLS----FGNQVTD 168
Query: 418 AIPEEIFNISHMSDSLNFARNHLVG-SIPPKIGNLKVLRMFVVSSNNLSGEIPSEIGSCF 476
P + N++ + + L+ + N + S+ K+ NL+ L + ++N +S P +G
Sbjct: 169 LKP--LANLTTL-ERLDISSNKVSDISVLAKLTNLESL---IATNNQISDITP--LGILT 220
Query: 477 YLQEIYMAENFFRGSIPSSLVSLKDLREIDLSQNNLSGKIPIS-LERLPLEYLNLSFNDL 535
L E+ + N + +L SL +L ++DL+ N +S P+S L + L L L N +
Sbjct: 221 NLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTK--LTELKLGANQI 276
Query: 536 EGQVPTKGIFA 546
P G+ A
Sbjct: 277 SNISPLAGLTA 287
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 29/252 (11%)
Query: 286 DEMSFIHSLANCSNLSFLNLVANQFKGALP--------HSIVSGSIPSEIGKLVSLYLIE 337
++++ I LAN +NL+ L L NQ P +S + S+I L L ++
Sbjct: 99 NQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQ 158
Query: 338 MDH--NQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVI 395
NQ P ++ L L+ L++ N++S S L++L LI NN +S +
Sbjct: 159 QLSFGNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDIT 214
Query: 396 PSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLR 455
P LG L L L L N L + ++++++D L+ A N + P + L L
Sbjct: 215 P--LGILTNLDELSLNGNQLKDI--GTLASLTNLTD-LDLANNQISNLAP--LSGLTKLT 267
Query: 456 MFVVSSNNLSGEIPSEIGSCFYLQEIYMAENFFRGSIPSSLVSLKDLREIDLSQNNLSGK 515
+ +N +S P + L + + EN P S +LK+L + L NN+S
Sbjct: 268 ELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISDI 323
Query: 516 IPIS----LERL 523
P+S L+RL
Sbjct: 324 SPVSSLTKLQRL 335
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 128/313 (40%), Gaps = 31/313 (9%)
Query: 18 HFCDWEGITCSPRHRRVTVLD-LKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEI 76
+F + + +P ++D L + I ++P + NL+ L + L NN I P +
Sbjct: 73 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--L 129
Query: 77 GRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQ 136
L L L LS N+ + +I LS + L L G N++ P +L L+ L I
Sbjct: 130 KNLTNLNRLELSSNT-ISDISA-LSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDIS 184
Query: 137 ENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSL 196
N ++ L +T+LE++ N + P LG L L L L G I L+
Sbjct: 185 SNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLAS 240
Query: 197 LANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNF 256
L N + + ++ N S PLA A L +LE L N
Sbjct: 241 LTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTA--LTNLE-LNENQ 297
Query: 257 FGKLSVNFGDMKSLAYLNVAINNLGSGE--------------SDEMSFIHSLANCSNLSF 302
+S ++K+L YL + NN+ ++++S + SLAN +N+++
Sbjct: 298 LEDISP-ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSDVSSLANLTNINW 356
Query: 303 LNLVANQFKGALP 315
L+ NQ P
Sbjct: 357 LSAGHNQISDLTP 369
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 21/165 (12%)
Query: 646 SSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRV 705
S T ++G G FG V+K G +A K++ + + E + + H NL+++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ F+ + LV +Y+ G L D DE NLT L+ I
Sbjct: 152 YDA-----FESKNDIVLVMEYVDGGEL-----------FDRIIDESYNLTELDTILFMKQ 195
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVG--DFGLAR 808
+ + ++H Q +H DLKP NIL N + DFGLAR
Sbjct: 196 ICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 36/197 (18%)
Query: 618 GKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN 677
G+ P++ +LR +LK T+ F ++G G+FG+VYKG + +G V I V
Sbjct: 1 GEAPNQALLR----------ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI 49
Query: 678 LQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL 732
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G L
Sbjct: 50 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCL 103
Query: 733 ENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNIL 792
+++ E D I + LL + + +A ++YL +H DL N+L
Sbjct: 104 LDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 793 LDNNLTAHVGDFGLARL 809
+ + DFG A+L
Sbjct: 150 VKTPQHVKITDFGRAKL 166
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 29/171 (16%)
Query: 649 HLIGIGSFGSVYKGTFDRDG---TIVAIKVLNL-QLQGASKSFAAECRALRNIRHRNLVR 704
+IG G FG V +G G + VAIK L + + F +E + H N++R
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 705 ---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
V+T+ + ++ ++M NG+L+++L ND T+++ +
Sbjct: 80 LEGVVTNSMPV--------MILTEFMENGALDSFLR---------LNDG--QFTVIQLVG 120
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ +AS + YL + +H DL NIL+++NL V DFGL+R +E
Sbjct: 121 MLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 168
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V + M NGSL+++L DA
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPV--------MIVTEXMENGSLDSFLRKHDA---------- 113
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGL+R+
Sbjct: 114 --QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 168
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 169 EDDPEAAYTTRG 180
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ + + IG GS+G K DG I+ K L+ + + +E LR ++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN---DEIRNLTLL 757
N+VR ID + N +V +Y G L + I + +E DE L ++
Sbjct: 66 NIVRYYDRI--ID-RTNTTLYIVMEYCEGGDLAS-----VITKGTKERQYLDEEFVLRVM 117
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++++A+ H +H DLKP+N+ LD +GDFGLAR+
Sbjct: 118 TQLTLALKECHRRSDGGH----TVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRH 699
+ + + IG GS+G K DG I+ K L+ + + +E LR ++H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN---DEIRNLTL 756
N+VR ID + N +V +Y G L + I + +E DE L +
Sbjct: 65 PNIVRYYDRI--ID-RTNTTLYIVMEYCEGGDLAS-----VITKGTKERQYLDEEFVLRV 116
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ ++++A+ H +H DLKP+N+ LD +GDFGLAR+
Sbjct: 117 MTQLTLALKECHRRSDGGH----TVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 17/173 (9%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRH 699
+ + + IG GS+G K DG I+ K L+ + + +E LR ++H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN---DEIRNLTL 756
N+VR ID + N +V +Y G L + I + +E DE L +
Sbjct: 65 PNIVRYYDRI--ID-RTNTTLYIVMEYCEGGDLAS-----VITKGTKERQYLDEEFVLRV 116
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ ++++A+ H +H DLKP+N+ LD +GDFGLAR+
Sbjct: 117 MTQLTLALKECHRRSDGGH----TVLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 36/197 (18%)
Query: 618 GKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN 677
G+ P++ +LR +LK T+ F ++ G+FG+VYKG + +G V I V
Sbjct: 1 GEAPNQALLR----------ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAI 49
Query: 678 LQLQGAS-----KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL 732
+L+ A+ K E + ++ + ++ R++ C + Q L+ Q MP G L
Sbjct: 50 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ------LITQLMPFGCL 103
Query: 733 ENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNIL 792
+++ E D I + LL + + +A ++YL +H DL N+L
Sbjct: 104 LDYVR--------EHKDNIGSQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNVL 149
Query: 793 LDNNLTAHVGDFGLARL 809
+ + DFGLA+L
Sbjct: 150 VKTPQHVKITDFGLAKL 166
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 32/192 (16%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFD---RDGTIVAIKVLNL-QLQGASKSFAAECRAL 694
L AT+ S ++G G FG V G + VAIK L + + + F E +
Sbjct: 42 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 695 RNIRHRNLVR---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-DAIPQTDEENDE 750
H N++R V+T + +V + M NGSL+++L DA
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPV--------MIVTEXMENGSLDSFLRKHDA---------- 142
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
T+++ + + +AS + YL +H DL NIL+++NL V DFGL+R+
Sbjct: 143 --QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 811 QEVPNNQSSSVG 822
++ P ++ G
Sbjct: 198 EDDPEAAYTTRG 209
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSC 709
++G G FG K T G ++ +K L + ++F E + +R + H N+++ I
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 710 SSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
D + N + +Y+ G+L I D + +R+S A D+AS
Sbjct: 77 YK-DKRLN----FITEYIKGGTLRG-----IIKSMDSQ------YPWSQRVSFAKDIASG 120
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ YLH IH DL N L+ N V DFGLARL
Sbjct: 121 MAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARL 157
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 21/162 (12%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G FG V+ T+++ T VA+K + + ++F AE ++ ++H LV++ +
Sbjct: 23 LGAGQFGEVWMATYNKH-TKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
++ ++M GSL ++L ++DE L + I + +A +
Sbjct: 81 KEPIY------IITEFMAKGSLLDFL----------KSDEGSKQPLPKLIDFSAQIAEGM 124
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
++ Q IH DL+ +NIL+ +L + DFGLAR+ ++
Sbjct: 125 AFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIED 163
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 30/165 (18%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK---SFAAECRALRNIRHRNLVR--- 704
+G GSFG V T + VA+K ++ QL S E L+ +RH ++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
VIT+ + I +V +Y G L +++ + + DE R
Sbjct: 77 VITTPTDI--------VMVIEY-AGGELFDYI----VEKKRMTEDEGRRFFQ-------- 115
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ A++Y H H +H DLKP N+LLD+NL + DFGL+ +
Sbjct: 116 QIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNI 157
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 152/353 (43%), Gaps = 60/353 (16%)
Query: 79 LFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQEN 138
L L + S+N L P L ++L+ + + N++ P +L NL L + N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 139 NLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLA 198
+T P L N+T+L + L+ N++ S+L L L+ L G + +L LA
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFGN----QVTDLKPLA 169
Query: 199 NFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNFFG 258
N + E IS+N S LA +NL+SL I NN
Sbjct: 170 NLTTLER-------------------LDISSNKVSDISVLA--KLTNLESL-IATNNQIS 207
Query: 259 KLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSI 318
++ G + +L L S +++ I +LA+ +NL+ L+L NQ P S
Sbjct: 208 DITP-LGILTNLDEL--------SLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSG 258
Query: 319 VSGSIPSEIGK-----------LVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQL 367
++ ++G L +L +E++ NQ E P +S L+NL +L + N +
Sbjct: 259 LTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNI 316
Query: 368 SGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP 420
S P S +L+ L +L NN +S V SSL NL + L N +S P
Sbjct: 317 SDISPVS--SLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 365
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 114/282 (40%), Gaps = 57/282 (20%)
Query: 306 VANQFKGALPHSIVSGSIP-SEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRH 364
+A + K L + V+ ++ +++ ++ +L + +G + L NL +N +
Sbjct: 18 LAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSN 72
Query: 365 NQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP---- 420
NQL+ P NL+ LV +++ NN ++ + P L NL L L LF N ++ P
Sbjct: 73 NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLKNL 128
Query: 421 ----------EEIFNISHMS-----DSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLS 465
I +IS +S LNF V + P + NL L +SSN +S
Sbjct: 129 TNLNRLELSSNTISDISALSGLTSLQQLNFGNQ--VTDLKP-LANLTTLERLDISSNKVS 185
Query: 466 GEIPSEIGSCFYLQEIYMAENFFRGSIP--------------------SSLVSLKDLREI 505
S + L+ + N P +L SL +L ++
Sbjct: 186 D--ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL 243
Query: 506 DLSQNNLSGKIPIS-LERLPLEYLNLSFNDLEGQVPTKGIFA 546
DL+ N +S P+S L + L L L N + P G+ A
Sbjct: 244 DLANNQISNLAPLSGLTK--LTELKLGANQISNISPLAGLTA 283
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 113/252 (44%), Gaps = 29/252 (11%)
Query: 286 DEMSFIHSLANCSNLSFLNLVANQFKGALP--------HSIVSGSIPSEIGKLVSLYLIE 337
++++ I LAN +NL+ L L NQ P +S + S+I L L ++
Sbjct: 95 NQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQ 154
Query: 338 MDH--NQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVI 395
+ NQ P ++ L L+ L++ N++S S L++L LI NN +S +
Sbjct: 155 QLNFGNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDIT 210
Query: 396 PSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLR 455
P LG L L L L N L + ++++++D L+ A N + P + L L
Sbjct: 211 P--LGILTNLDELSLNGNQLKDI--GTLASLTNLTD-LDLANNQISNLAP--LSGLTKLT 263
Query: 456 MFVVSSNNLSGEIPSEIGSCFYLQEIYMAENFFRGSIPSSLVSLKDLREIDLSQNNLSGK 515
+ +N +S P + L + + EN P S +LK+L + L NN+S
Sbjct: 264 ELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISDI 319
Query: 516 IPIS----LERL 523
P+S L+RL
Sbjct: 320 SPVSSLTKLQRL 331
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 128/313 (40%), Gaps = 31/313 (9%)
Query: 18 HFCDWEGITCSPRHRRVTVLD-LKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEI 76
+F + + +P ++D L + I ++P + NL+ L + L NN I P +
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--L 125
Query: 77 GRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQ 136
L L L LS N+ + +I LS + L L G N++ P +L L+ L I
Sbjct: 126 KNLTNLNRLELSSNT-ISDISA-LSGLTSLQQLNFG-NQVTDLKP--LANLTTLERLDIS 180
Query: 137 ENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSL 196
N ++ L +T+LE++ N + P LG L L L L G I L+
Sbjct: 181 SNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLAS 236
Query: 197 LANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNF 256
L N + + ++ N S PLA A L +LE L N
Sbjct: 237 LTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTA--LTNLE-LNENQ 293
Query: 257 FGKLSVNFGDMKSLAYLNVAINNLGSGE--------------SDEMSFIHSLANCSNLSF 302
+S ++K+L YL + NN+ ++++S + SLAN +N+++
Sbjct: 294 LEDISP-ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 352
Query: 303 LNLVANQFKGALP 315
L+ NQ P
Sbjct: 353 LSAGHNQISDLTP 365
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 20/171 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL-QLQGASKSFAAECRALRNIRHRNLV 703
F +G G FG V++ D AIK + L + A + E +AL + H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 704 RVITSC----SSIDFQGNDFKALVY---QYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
R + ++ Q + K +Y Q +L++W++ T EE + R++ L
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC---TIEERE--RSVCL 121
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
I + +A AV++LH + +H DLKPSNI + VGDFGL
Sbjct: 122 ----HIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 26/177 (14%)
Query: 638 LLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS-----KSFAAECR 692
+LK T+ F ++G G+FG+VYKG + +G V I V +L+ A+ K E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 693 ALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR 752
+ ++ + ++ R++ C + Q L+ Q MP G L +++ E D I
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVR--------EHKDNIG 119
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ LL + + +A ++YL +H DL N+L+ + DFG A+L
Sbjct: 120 SQYLL---NWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 170
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
F+ IG GSFG V+KG +R +VAIK+++L+ + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIE-----------DIQQEIT 73
Query: 705 VITSCSS---IDFQGNDFKA----LVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
V++ C S + G+ K ++ +Y+ GS + L DE + T+L
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF-------DEFQIATML 126
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ I +DYLH E IH D+K +N+LL + DFG+A
Sbjct: 127 KEI------LKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNI 697
+ ++ F +G G++ +VYKG G VA+K + L + + S A E ++ +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
+H N+VR+ + + LV+++M N L+ ++ + T R L L
Sbjct: 61 KHENIVRLYDVIHT-----ENKLTLVFEFMDN-DLKKYMDSRTVGNTP------RGLELN 108
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + H + +H DLKP N+L++ +GDFGLAR
Sbjct: 109 LVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 31/170 (18%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL-------QLQGASKSFAAECRALRNIRHRNLV 703
IG G FG V+KG +D ++VAIK L L ++ + F E + N+ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIA 763
++ ++ +V +++P G L + L A P + ++ +
Sbjct: 87 KLYGLM-------HNPPRMVMEFVPCGDLYHRLLDKAHP-----------IKWSVKLRLM 128
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNIL---LDNN--LTAHVGDFGLAR 808
+D+A ++Y+ + P +H DL+ NI LD N + A V DFGL++
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 153/353 (43%), Gaps = 60/353 (16%)
Query: 79 LFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQEN 138
L L + S+N L P L ++L+ + + N++ P +L NL L + N
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122
Query: 139 NLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLA 198
+T P L N+T+L + L+ N++ S+L L L+ L G + +L LA
Sbjct: 123 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGN----QVTDLKPLA 174
Query: 199 NFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNFFG 258
N + E IS+N S LA +NL+SL I NN
Sbjct: 175 NLTTLER-------------------LDISSNKVSDISVLA--KLTNLESL-IATNNQIS 212
Query: 259 KLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSI 318
++ G + +L L++ +++ I +LA+ +NL+ L+L NQ P S
Sbjct: 213 DITP-LGILTNLDELSL--------NGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSG 263
Query: 319 VSGSIPSEIGK-----------LVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQL 367
++ ++G L +L +E++ NQ E P +S L+NL +L + N +
Sbjct: 264 LTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNI 321
Query: 368 SGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP 420
S P S +L+ L +L NN +S V SSL NL + L N +S P
Sbjct: 322 SDISPVS--SLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 370
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 34/251 (13%)
Query: 299 NLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQ 358
NL+ +N NQ P + L L I M++NQ P ++ L NL
Sbjct: 69 NLTQINFSNNQLTDITP-----------LKNLTKLVDILMNNNQIADITP--LANLTNLT 115
Query: 359 FLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIP-SSLGNLKQLALLHLFQNDLSG 417
L + +NQ++ P NL++L +L L +N +S + S L +L+QL+ F N ++
Sbjct: 116 GLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLS----FGNQVTD 169
Query: 418 AIPEEIFNISHMSDSLNFARNHLVG-SIPPKIGNLKVLRMFVVSSNNLSGEIPSEIGSCF 476
P + N++ + + L+ + N + S+ K+ NL+ L + ++N +S P +G
Sbjct: 170 LKP--LANLTTL-ERLDISSNKVSDISVLAKLTNLESL---IATNNQISDITP--LGILT 221
Query: 477 YLQEIYMAENFFRGSIPSSLVSLKDLREIDLSQNNLSGKIPIS-LERLPLEYLNLSFNDL 535
L E+ + N + +L SL +L ++DL+ N +S P+S L + L L L N +
Sbjct: 222 NLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTK--LTELKLGANQI 277
Query: 536 EGQVPTKGIFA 546
P G+ A
Sbjct: 278 SNISPLAGLTA 288
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 112/252 (44%), Gaps = 29/252 (11%)
Query: 286 DEMSFIHSLANCSNLSFLNLVANQFKGALP--------HSIVSGSIPSEIGKLVSLYLIE 337
++++ I LAN +NL+ L L NQ P +S + S+I L L ++
Sbjct: 100 NQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQ 159
Query: 338 MDH--NQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVI 395
NQ P ++ L L+ L++ N++S S L++L LI NN +S +
Sbjct: 160 QLSFGNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDIT 215
Query: 396 PSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLR 455
P LG L L L L N L + ++++++D L+ A N + P + L L
Sbjct: 216 P--LGILTNLDELSLNGNQLKDI--GTLASLTNLTD-LDLANNQISNLAP--LSGLTKLT 268
Query: 456 MFVVSSNNLSGEIPSEIGSCFYLQEIYMAENFFRGSIPSSLVSLKDLREIDLSQNNLSGK 515
+ +N +S P + L + + EN P S +LK+L + L NN+S
Sbjct: 269 ELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISDI 324
Query: 516 IPIS----LERL 523
P+S L+RL
Sbjct: 325 SPVSSLTKLQRL 336
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 128/313 (40%), Gaps = 31/313 (9%)
Query: 18 HFCDWEGITCSPRHRRVTVLD-LKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEI 76
+F + + +P ++D L + I ++P + NL+ L + L NN I P +
Sbjct: 74 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--L 130
Query: 77 GRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQ 136
L L L LS N+ + +I LS + L L G N++ P +L L+ L I
Sbjct: 131 KNLTNLNRLELSSNT-ISDISA-LSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDIS 185
Query: 137 ENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSL 196
N ++ L +T+LE++ N + P LG L L L L G I L+
Sbjct: 186 SNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLAS 241
Query: 197 LANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNF 256
L N + + ++ N S PLA A L +LE L N
Sbjct: 242 LTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTA--LTNLE-LNENQ 298
Query: 257 FGKLSVNFGDMKSLAYLNVAINNLGSGE--------------SDEMSFIHSLANCSNLSF 302
+S ++K+L YL + NN+ ++++S + SLAN +N+++
Sbjct: 299 LEDISP-ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 357
Query: 303 LNLVANQFKGALP 315
L+ NQ P
Sbjct: 358 LSAGHNQISDLTP 370
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 637 SLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRN 696
SL A+D F ++G G+FG V K D AIK + + S + +E L +
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLAS 58
Query: 697 IRHRNLVR----------VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDE 746
+ H+ +VR + +++ + F + +Y NG+L + +H + + Q
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQM--EYCENGTLYDLIHSENLNQ--- 113
Query: 747 ENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL 806
+ DE L + A+ Y+H + IH DLKP NI +D + +GDFGL
Sbjct: 114 QRDEYWRLFR--------QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGL 162
Query: 807 AR 808
A+
Sbjct: 163 AK 164
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 24/167 (14%)
Query: 647 STHLIGIGSFGSVYKGTF---DRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRN 701
S +IG G FG VY G + ++ AIK L+ ++Q ++F E +R + H N
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQV-EAFLREGLLMRGLNHPN 83
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
++ +I I ++ YM +G L ++ PQ RN T+ + IS
Sbjct: 84 VLALI----GIMLPPEGLPHVLLPYMCHGDLLQFIRS---PQ--------RNPTVKDLIS 128
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ VA ++YL ++ +H DL N +LD + T V DFGLAR
Sbjct: 129 FGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
IG G FG V G D G VA+K + + +++F AE + +RH NLV+++
Sbjct: 14 IGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 68
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE---RISIAIDVA 767
++ +G + +V +YM GSL ++L R ++L + ++DV
Sbjct: 69 -VEEKGGLY--IVTEYMAKGSLVDYLRS-------------RGRSVLGGDCLLKFSLDVC 112
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A++YL + +H DL N+L+ + A V DFGL +
Sbjct: 113 EAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
IG G FG V G D G VA+K + + +++F AE + +RH NLV+++
Sbjct: 20 IGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 74
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE---RISIAIDVA 767
++ +G + +V +YM GSL ++L R ++L + ++DV
Sbjct: 75 -VEEKGGLY--IVTEYMAKGSLVDYLRS-------------RGRSVLGGDCLLKFSLDVC 118
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A++YL + +H DL N+L+ + A V DFGL +
Sbjct: 119 EAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G + L Q + DE R T +
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYKEL------QKLSKFDEQRTATYI 119
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 120 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G + L Q + DE R T +
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYKEL------QKLSKFDEQRTATYI 119
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 120 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVI 706
+G G FG V ++G +D VAIK++ + + F E + + N+ H LV++
Sbjct: 23 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 76
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C+ Q F ++ +YM NG L N+L E + LLE + DV
Sbjct: 77 GVCTK---QRPIF--IITEYMANGCLLNYLR--------EMRHRFQTQQLLE---MCKDV 120
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
A++YL + +H DL N L+++ V DFGL+R + + +SSVG
Sbjct: 121 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVG 171
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVI 706
+G G FG V ++G +D VAIK++ + + F E + + N+ H LV++
Sbjct: 16 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 69
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C+ Q F ++ +YM NG L N+L E + LLE + DV
Sbjct: 70 GVCTK---QRPIF--IITEYMANGCLLNYLR--------EMRHRFQTQQLLE---MCKDV 113
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
A++YL + +H DL N L+++ V DFGL+R + + +SSVG
Sbjct: 114 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVG 164
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVI 706
+G G FG V ++G +D VAIK++ + + F E + + N+ H LV++
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C+ Q F ++ +YM NG L N+L E + LLE + DV
Sbjct: 71 GVCTK---QRPIF--IITEYMANGCLLNYLR--------EMRHRFQTQQLLE---MCKDV 114
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
A++YL + +H DL N L+++ V DFGL+R + + +SSVG
Sbjct: 115 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVG 165
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVI 706
+G G FG V ++G +D VAIK++ + + F E + + N+ H LV++
Sbjct: 12 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C+ Q F ++ +YM NG L N+L E + LLE + DV
Sbjct: 66 GVCTK---QRPIF--IITEYMANGCLLNYLR--------EMRHRFQTQQLLE---MCKDV 109
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
A++YL + +H DL N L+++ V DFGL+R + + +SSVG
Sbjct: 110 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVG 160
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 29/171 (16%)
Query: 649 HLIGIGSFGSVYKGTFDRDGT---IVAIKVLNL-QLQGASKSFAAECRALRNIRHRNLVR 704
+IG G FG V G G VAIK L + + F +E + H N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 705 ---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
V+T + + ++ ++M NGSL+++L Q D + I+ + +L I+
Sbjct: 99 LEGVVTKSTPV--------MIITEFMENGSLDSFLR-----QNDGQFTVIQLVGMLRGIA 145
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ + ++Y+H DL NIL+++NL V DFGL+R ++
Sbjct: 146 AGMKYLADMNYVHR---------DLAARNILVNSNLVCKVSDFGLSRFLED 187
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 634 SYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS-KSFAAECR 692
Y+ LLK + IG G F V G +VAIK+++ G+ E
Sbjct: 4 DYDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE 60
Query: 693 ALRNIRHRN---LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEND 749
AL+N+RH++ L V+ + + I +V +Y P G L +++ I Q +
Sbjct: 61 ALKNLRHQHICQLYHVLETANKI--------FMVLEYCPGGELFDYI----ISQDRLSEE 108
Query: 750 EIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
E R + + SAV Y+H + H DLKP N+L D + DFGL
Sbjct: 109 ETR--------VVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLC 155
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 151/353 (42%), Gaps = 59/353 (16%)
Query: 79 LFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQEN 138
L L + S+N L P L ++L+ + + N++ P +L NL L + N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 139 NLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLA 198
+T P L N+T+L + L+ N++ S+L L L+ L + +L LA
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSN---QVTDLKPLA 170
Query: 199 NFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNFFG 258
N + E IS+N S LA +NL+SL I NN
Sbjct: 171 NLTTLER-------------------LDISSNKVSDISVLA--KLTNLESL-IATNNQIS 208
Query: 259 KLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSI 318
++ G + +L L S +++ I +LA+ +NL+ L+L NQ P S
Sbjct: 209 DITP-LGILTNLDEL--------SLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSG 259
Query: 319 VSGSIPSEIGK-----------LVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQL 367
++ ++G L +L +E++ NQ E P +S L+NL +L + N +
Sbjct: 260 LTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNI 317
Query: 368 SGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP 420
S P S +L+ L +L NN +S V SSL NL + L N +S P
Sbjct: 318 SDISPVS--SLTKLQRLFFSNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 366
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 115/282 (40%), Gaps = 56/282 (19%)
Query: 306 VANQFKGALPHSIVSGSIP-SEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRH 364
+A + K L + V+ ++ +++ ++ +L + +G + L NL +N +
Sbjct: 18 LAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSN 72
Query: 365 NQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP---- 420
NQL+ P NL+ LV +++ NN ++ + P L NL L L LF N ++ P
Sbjct: 73 NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLKNL 128
Query: 421 ----------EEIFNISHMS-----DSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLS 465
I +IS +S L+F+ N + P + NL L +SSN +S
Sbjct: 129 TNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVS 186
Query: 466 GEIPSEIGSCFYLQEIYMAENFFRGSIP--------------------SSLVSLKDLREI 505
S + L+ + N P +L SL +L ++
Sbjct: 187 D--ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL 244
Query: 506 DLSQNNLSGKIPIS-LERLPLEYLNLSFNDLEGQVPTKGIFA 546
DL+ N +S P+S L + L L L N + P G+ A
Sbjct: 245 DLANNQISNLAPLSGLTK--LTELKLGANQISNISPLAGLTA 284
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 112/253 (44%), Gaps = 30/253 (11%)
Query: 286 DEMSFIHSLANCSNLSFLNLVANQFKGALPHS---------IVSGSIP--SEIGKLVSLY 334
++++ I LAN +NL+ L L NQ P + S +I S + L SL
Sbjct: 95 NQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQ 154
Query: 335 LIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGV 394
+ NQ P ++ L L+ L++ N++S S L++L LI NN +S +
Sbjct: 155 QLSFSSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDI 210
Query: 395 IPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVL 454
P LG L L L L N L + ++++++D L+ A N + P + L L
Sbjct: 211 TP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTD-LDLANNQISNLAP--LSGLTKL 263
Query: 455 RMFVVSSNNLSGEIPSEIGSCFYLQEIYMAENFFRGSIPSSLVSLKDLREIDLSQNNLSG 514
+ +N +S P + L + + EN P S +LK+L + L NN+S
Sbjct: 264 TELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISD 319
Query: 515 KIPIS----LERL 523
P+S L+RL
Sbjct: 320 ISPVSSLTKLQRL 332
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 30/313 (9%)
Query: 18 HFCDWEGITCSPRHRRVTVLD-LKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEI 76
+F + + +P ++D L + I ++P + NL+ L + L NN I P +
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--L 125
Query: 77 GRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQ 136
L L L LS N+ + +I LS + L L N++ P +L L+ L I
Sbjct: 126 KNLTNLNRLELSSNT-ISDISA-LSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDIS 181
Query: 137 ENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSL 196
N ++ L +T+LE++ N + P LG L L L L G I L+
Sbjct: 182 SNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLAS 237
Query: 197 LANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNF 256
L N + + ++ N S PLA A L +LE L N
Sbjct: 238 LTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTA--LTNLE-LNENQ 294
Query: 257 FGKLSVNFGDMKSLAYLNVAINNLGS--------------GESDEMSFIHSLANCSNLSF 302
+S ++K+L YL + NN+ ++++S + SLAN +N+++
Sbjct: 295 LEDISP-ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTNINW 353
Query: 303 LNLVANQFKGALP 315
L+ NQ P
Sbjct: 354 LSAGHNQISDLTP 366
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
IG G FG V G D G VA+K + + +++F AE + +RH NLV+++
Sbjct: 29 IGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 83
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE---RISIAIDVA 767
++ +G + +V +YM GSL ++L R ++L + ++DV
Sbjct: 84 -VEEKGGLY--IVTEYMAKGSLVDYLRS-------------RGRSVLGGDCLLKFSLDVC 127
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A++YL + +H DL N+L+ + A V DFGL +
Sbjct: 128 EAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL-----QLQGASKSFAAECRALRNIRH 699
+ +G G F +VYK IVAIK + L G +++ E + L+ + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
N++ ++ + F +LV+ +M LE + +++ T +TL
Sbjct: 72 PNIIGLLDA-----FGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTL--- 122
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++YLH H +H DLKP+N+LLD N + DFGLA+
Sbjct: 123 --------QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 140
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 141 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 29/162 (17%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVI 706
+G G FG V ++G +D VAIK++ + + F E + + N+ H LV++
Sbjct: 17 LGTGQFGVVKYGKWRGQYD-----VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C+ Q F ++ +YM NG L N+L E + LLE + DV
Sbjct: 71 GVCTK---QRPIF--IITEYMANGCLLNYLR--------EMRHRFQTQQLLE---MCKDV 114
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A++YL + +H DL N L+++ V DFGL+R
Sbjct: 115 CEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 114
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 115 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 117
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 118 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
IG G FG V G D G VA+K + + +++F AE + +RH NLV+++
Sbjct: 201 IGKGEFGDVMLG--DYRGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLVQLLGVI- 255
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE---RISIAIDVA 767
++ +G + +V +YM GSL ++L R ++L + ++DV
Sbjct: 256 -VEEKGGLY--IVTEYMAKGSLVDYLRS-------------RGRSVLGGDCLLKFSLDVC 299
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A++YL + +H DL N+L+ + A V DFGL +
Sbjct: 300 EAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 21/166 (12%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKS----FAAECRALRNIRHRNLVRVI 706
IG GSF +VYKG D + T V + LQ + +KS F E L+ ++H N+VR
Sbjct: 34 IGRGSFKTVYKG-LDTE-TTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
S S +G LV + +G+L+ +L + ++ + +L S +
Sbjct: 92 DSWEST-VKGKKCIVLVTELXTSGTLKTYL----------KRFKVXKIKVLR--SWCRQI 138
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNL-TAHVGDFGLARLRQ 811
+ +LH P IH DLK NI + + +GD GLA L++
Sbjct: 139 LKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 31/170 (18%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL-------QLQGASKSFAAECRALRNIRHRNLV 703
IG G FG V+KG +D ++VAIK L L ++ + F E + N+ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIA 763
++ ++ +V +++P G L + L A P + ++ +
Sbjct: 87 KLYGLM-------HNPPRMVMEFVPCGDLYHRLLDKAHP-----------IKWSVKLRLM 128
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNIL---LDNN--LTAHVGDFGLAR 808
+D+A ++Y+ + P +H DL+ NI LD N + A V DFG ++
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 114
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 115 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 117
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 118 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 140
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 141 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 181
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 117
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 118 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 650 LIGIGSFGSVYKGTFDRDG---TIVAIKVLNL-QLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G G V G G VAIK L + + F +E + H N++R+
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ +G +V +YM NGSL+ +L +T + T+++ + +
Sbjct: 116 ----EGVVTRGR-LAMIVTEYMENGSLDTFL------RTHDGQ-----FTIMQLVGMLRG 159
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
V + + YL +H DL N+L+D+NL V DFGL+R+ ++ P+ ++ G
Sbjct: 160 VGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTG 213
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 116
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 117 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 157
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 651 IGIGSFGSVYKGTF----DRDGTI-VAIKVLNLQLQGASK-SFAAECRALRNI-RHRNLV 703
+G G+FG V + T D + VA+K+L K + +E + + ++ +H N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIA 763
++ +C+ G ++ +Y G L N+L A D+E+ R L L + + +
Sbjct: 106 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEADLDKEDG--RPLELRDLLHFS 158
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + +L + IH D+ N+LL N A +GDFGLAR
Sbjct: 159 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 23/168 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ--GASKSFAAECRALRNIRHR 700
+ + +G G++G VYK D G IVA+K + L + G + E L+ + H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V +I S LV+++M D DE N T L+
Sbjct: 80 NIVSLIDVIHS-----ERCLTLVFEFMEK---------DLKKVLDE------NKTGLQDS 119
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I I + + + H Q +H DLKP N+L++++ + DFGLAR
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 649 HLIGIGSFGSVYKGTFDRDG---TIVAIKVLNL-QLQGASKSFAAECRALRNIRHRNLVR 704
+IG G FG V G G VAIK L + + + F E + H N+V
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 705 ---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
V+T + +V ++M NG+L+ +L ++D T+++ +
Sbjct: 109 LEGVVTRGKPV--------MIVIEFMENGALDAFLR---------KHDG--QFTVIQLVG 149
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
+ +A+ + YL +H DL NIL+++NL V DFGL+R+ ++ P ++
Sbjct: 150 MLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTT 206
Query: 822 G 822
G
Sbjct: 207 G 207
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 23/168 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ--GASKSFAAECRALRNIRHR 700
+ + +G G++G VYK D G IVA+K + L + G + E L+ + H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V +I S LV+++M D DE N T L+
Sbjct: 80 NIVSLIDVIHS-----ERCLTLVFEFMEK---------DLKKVLDE------NKTGLQDS 119
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I I + + + H Q +H DLKP N+L++++ + DFGLAR
Sbjct: 120 QIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 23/168 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNIRH 699
D F +G G FG+VY + IVA+KVL ++ +G E ++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
N++R+ F L+ +Y P G L L Q DE R T++E
Sbjct: 83 PNILRLYNY-----FYDRRRIYLILEYAPRGELYKEL------QKSCTFDEQRTATIME- 130
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A A+ Y H + IH D+KP N+LL + DFG +
Sbjct: 131 -----ELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWS 170
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 115
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 116 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 119
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 120 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 119
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 120 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 115
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 116 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 34/170 (20%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
F+ IG GSFG VYKG + +VAIK+++L+ + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDI-----------QQEIT 69
Query: 705 VITSCSS---IDFQGNDFKA----LVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
V++ C S + G+ K+ ++ +Y+ GS + L P + +T
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEET------------- 116
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+I ++ +DYLH E IH D+K +N+LL + DFG+A
Sbjct: 117 YIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 115
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 116 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 156
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 83 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 131
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 132 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 172
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 117
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 118 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 158
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 114
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 115 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 119
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 120 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 160
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 650 LIGIGSFGSVYKGTFDRDG---TIVAIKVLNL-QLQGASKSFAAECRALRNIRHRNLVRV 705
+IG G G V G G VAIK L + + F +E + H N++R+
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ +G +V +YM NGSL+ +L +T + T+++ + +
Sbjct: 116 ----EGVVTRGR-LAMIVTEYMENGSLDTFL------RTHDGQ-----FTIMQLVGMLRG 159
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
V + + YL +H DL N+L+D+NL V DFGL+R+ ++ P+ ++ G
Sbjct: 160 VGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTG 213
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 651 IGIGSFGSVYKGTF----DRDGTI-VAIKVLNLQLQGASK-SFAAECRALRNI-RHRNLV 703
+G G+FG V + T D + VA+K+L K + +E + + ++ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIA 763
++ +C+ G ++ +Y G L N+L A D+E+ R L L + + +
Sbjct: 114 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEADLDKEDG--RPLELRDLLHFS 166
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
VA + +L + IH D+ N+LL N A +GDFGLAR
Sbjct: 167 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 114
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + DFG +
Sbjct: 115 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 155
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNIRHRNLVRVIT 707
+G G FG+VY + I+A+KVL L+ G E ++RH N++R+
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
F L+ +Y P G++ L Q DE R T + ++A
Sbjct: 80 Y-----FHDATRVYLILEYAPLGTVYREL------QKLSRFDEQRTATYI------TELA 122
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
+A+ Y H + IH D+KP N+LL +N + DFG
Sbjct: 123 NALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNIRHRNLVRVIT 707
+G G FG+VY + I+A+KVL L+ G E ++RH N++R+
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
F L+ +Y P G++ L Q DE R T + ++A
Sbjct: 80 Y-----FHDATRVYLILEYAPLGTVYREL------QKLSRFDEQRTATYI------TELA 122
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
+A+ Y H + IH D+KP N+LL +N + DFG
Sbjct: 123 NALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 151/353 (42%), Gaps = 59/353 (16%)
Query: 79 LFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQEN 138
L L + S+N L P L ++L+ + + N++ P +L NL L + N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 139 NLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLA 198
+T P L N+T+L + L+ N++ S+L L L+ L + +L LA
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFSSN---QVTDLKPLA 170
Query: 199 NFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNFFG 258
N + E IS+N S LA +NL+SL I NN
Sbjct: 171 NLTTLER-------------------LDISSNKVSDISVLA--KLTNLESL-IATNNQIS 208
Query: 259 KLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSI 318
++ G + +L L S +++ I +LA+ +NL+ L+L NQ P S
Sbjct: 209 DITP-LGILTNLDEL--------SLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSG 259
Query: 319 VSGSIPSEIGK-----------LVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQL 367
++ ++G L +L +E++ NQ E P +S L+NL +L + N +
Sbjct: 260 LTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNI 317
Query: 368 SGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP 420
S P S +L+ L +L NN +S V SSL NL + L N +S P
Sbjct: 318 SDISPVS--SLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 366
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 115/282 (40%), Gaps = 56/282 (19%)
Query: 306 VANQFKGALPHSIVSGSIP-SEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRH 364
+A + K L + V+ ++ +++ ++ +L + +G + L NL +N +
Sbjct: 18 LAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSN 72
Query: 365 NQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP---- 420
NQL+ P NL+ LV +++ NN ++ + P L NL L L LF N ++ P
Sbjct: 73 NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLKNL 128
Query: 421 ----------EEIFNISHMS-----DSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLS 465
I +IS +S L+F+ N + P + NL L +SSN +S
Sbjct: 129 TNLNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVS 186
Query: 466 GEIPSEIGSCFYLQEIYMAENFFRGSIP--------------------SSLVSLKDLREI 505
S + L+ + N P +L SL +L ++
Sbjct: 187 D--ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL 244
Query: 506 DLSQNNLSGKIPIS-LERLPLEYLNLSFNDLEGQVPTKGIFA 546
DL+ N +S P+S L + L L L N + P G+ A
Sbjct: 245 DLANNQISNLAPLSGLTK--LTELKLGANQISNISPLAGLTA 284
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 112/253 (44%), Gaps = 30/253 (11%)
Query: 286 DEMSFIHSLANCSNLSFLNLVANQFKGALPHS---------IVSGSIP--SEIGKLVSLY 334
++++ I LAN +NL+ L L NQ P + S +I S + L SL
Sbjct: 95 NQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQ 154
Query: 335 LIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGV 394
+ NQ P ++ L L+ L++ N++S S L++L LI NN +S +
Sbjct: 155 QLSFSSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDI 210
Query: 395 IPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVL 454
P LG L L L L N L + ++++++D L+ A N + P + L L
Sbjct: 211 TP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTD-LDLANNQISNLAP--LSGLTKL 263
Query: 455 RMFVVSSNNLSGEIPSEIGSCFYLQEIYMAENFFRGSIPSSLVSLKDLREIDLSQNNLSG 514
+ +N +S P + L + + EN P S +LK+L + L NN+S
Sbjct: 264 TELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISD 319
Query: 515 KIPIS----LERL 523
P+S L+RL
Sbjct: 320 ISPVSSLTKLQRL 332
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 30/313 (9%)
Query: 18 HFCDWEGITCSPRHRRVTVLD-LKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEI 76
+F + + +P ++D L + I ++P + NL+ L + L NN I P +
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--L 125
Query: 77 GRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQ 136
L L L LS N+ + +I LS + L L N++ P +L L+ L I
Sbjct: 126 KNLTNLNRLELSSNT-ISDISA-LSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDIS 181
Query: 137 ENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSL 196
N ++ L +T+LE++ N + P LG L L L L G I L+
Sbjct: 182 SNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLAS 237
Query: 197 LANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNF 256
L N + + ++ N S PLA A L +LE L N
Sbjct: 238 LTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTA--LTNLE-LNENQ 294
Query: 257 FGKLSVNFGDMKSLAYLNVAINNLGSGE--------------SDEMSFIHSLANCSNLSF 302
+S ++K+L YL + NN+ ++++S + SLAN +N+++
Sbjct: 295 LEDISP-ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 353
Query: 303 LNLVANQFKGALP 315
L+ NQ P
Sbjct: 354 LSAGHNQISDLTP 366
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 31/170 (18%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL-------QLQGASKSFAAECRALRNIRHRNLV 703
IG G FG V+KG +D ++VAIK L L ++ + F E + N+ H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIA 763
++ ++ +V +++P G L + L A P + ++ +
Sbjct: 87 KLYGLM-------HNPPRMVMEFVPCGDLYHRLLDKAHP-----------IKWSVKLRLM 128
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNIL---LDNN--LTAHVGDFGLAR 808
+D+A ++Y+ + P +H DL+ NI LD N + A V DF L++
Sbjct: 129 LDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 151/353 (42%), Gaps = 59/353 (16%)
Query: 79 LFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQEN 138
L L + S+N L P L ++L+ + + N++ P +L NL L + N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 117
Query: 139 NLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLA 198
+T P L N+T+L + L+ N++ S+L L L+ L + +L LA
Sbjct: 118 QITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFSSN---QVTDLKPLA 170
Query: 199 NFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNFFG 258
N + E IS+N S LA +NL+SL I NN
Sbjct: 171 NLTTLER-------------------LDISSNKVSDISVLA--KLTNLESL-IATNNQIS 208
Query: 259 KLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSI 318
++ G + +L L S +++ I +LA+ +NL+ L+L NQ P S
Sbjct: 209 DITP-LGILTNLDEL--------SLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSG 259
Query: 319 VSGSIPSEIGK-----------LVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQL 367
++ ++G L +L +E++ NQ E P +S L+NL +L + N +
Sbjct: 260 LTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNI 317
Query: 368 SGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP 420
S P S +L+ L +L NN +S V SSL NL + L N +S P
Sbjct: 318 SDISPVS--SLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP 366
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 115/282 (40%), Gaps = 56/282 (19%)
Query: 306 VANQFKGALPHSIVSGSIP-SEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRH 364
+A + K L + V+ ++ +++ ++ +L + +G + L NL +N +
Sbjct: 18 LAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDG-----VEYLNNLTQINFSN 72
Query: 365 NQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP---- 420
NQL+ P NL+ LV +++ NN ++ + P L NL L L LF N ++ P
Sbjct: 73 NQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDPLKNL 128
Query: 421 ----------EEIFNISHMS-----DSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLS 465
I +IS +S LNF+ N + P + NL L +SSN +S
Sbjct: 129 TNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVS 186
Query: 466 GEIPSEIGSCFYLQEIYMAENFFRGSIP--------------------SSLVSLKDLREI 505
S + L+ + N P +L SL +L ++
Sbjct: 187 D--ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDL 244
Query: 506 DLSQNNLSGKIPIS-LERLPLEYLNLSFNDLEGQVPTKGIFA 546
DL+ N +S P+S L + L L L N + P G+ A
Sbjct: 245 DLANNQISNLAPLSGLTK--LTELKLGANQISNISPLAGLTA 284
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 112/253 (44%), Gaps = 30/253 (11%)
Query: 286 DEMSFIHSLANCSNLSFLNLVANQFKGALPHS---------IVSGSIP--SEIGKLVSLY 334
++++ I LAN +NL+ L L NQ P + S +I S + L SL
Sbjct: 95 NQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQ 154
Query: 335 LIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGV 394
+ NQ P ++ L L+ L++ N++S S L++L LI NN +S +
Sbjct: 155 QLNFSSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDI 210
Query: 395 IPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVL 454
P LG L L L L N L + ++++++D L+ A N + P + L L
Sbjct: 211 TP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTD-LDLANNQISNLAP--LSGLTKL 263
Query: 455 RMFVVSSNNLSGEIPSEIGSCFYLQEIYMAENFFRGSIPSSLVSLKDLREIDLSQNNLSG 514
+ +N +S P + L + + EN P S +LK+L + L NN+S
Sbjct: 264 TELKLGANQISNISP--LAGLTALTNLELNENQLEDISPIS--NLKNLTYLTLYFNNISD 319
Query: 515 KIPIS----LERL 523
P+S L+RL
Sbjct: 320 ISPVSSLTKLQRL 332
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 127/313 (40%), Gaps = 30/313 (9%)
Query: 18 HFCDWEGITCSPRHRRVTVLD-LKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEI 76
+F + + +P ++D L + I ++P + NL+ L + L NN I P +
Sbjct: 69 NFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP--L 125
Query: 77 GRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQ 136
L L L LS N+ + +I LS + L L N++ P +L L+ L I
Sbjct: 126 KNLTNLNRLELSSNT-ISDISA-LSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDIS 181
Query: 137 ENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSL 196
N ++ L +T+LE++ N + P LG L L L L G I L+
Sbjct: 182 SNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDIGTLAS 237
Query: 197 LANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNF 256
L N + + ++ N S PLA A L +LE L N
Sbjct: 238 LTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTA--LTNLE-LNENQ 294
Query: 257 FGKLSVNFGDMKSLAYLNVAINNLGSGE--------------SDEMSFIHSLANCSNLSF 302
+S ++K+L YL + NN+ ++++S + SLAN +N+++
Sbjct: 295 LEDISP-ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 353
Query: 303 LNLVANQFKGALP 315
L+ NQ P
Sbjct: 354 LSAGHNQISDLTP 366
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 17/175 (9%)
Query: 255 NFFGKLSVNFGDMKS---LAYL-NVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQF 310
N ++ N D+KS + YL NV LG + ++S + L +NL++L L NQ
Sbjct: 41 NSIDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDISALKEL---TNLTYLILTGNQL 97
Query: 311 KGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGE 370
+ +LP+ + ++ L L L+E NQ + +L NL +L + HNQL
Sbjct: 98 Q-SLPNGVFD-----KLTNLKELVLVE---NQLQSLPDGVFDKLTNLTYLYLYHNQLQSL 148
Query: 371 IPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFN 425
F L++L +L L NN L + L QL L L N L ++P+ +F+
Sbjct: 149 PKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLK-SVPDGVFD 202
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%)
Query: 55 LSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRN 114
L+ L+E+ L N +Q G +L L LYL HN L G + L L L N
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNN 167
Query: 115 KLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYN 162
+L+ F L LK+L++ +N L +TSL I L N
Sbjct: 168 QLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLNN 215
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Query: 51 QIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLY 110
++ NL++L L+ N +Q G +L L+ L L N L G + L LY
Sbjct: 83 ELTNLTYLI---LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLY 139
Query: 111 LGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSL 164
L N+L+ F L NL L + N L +T L+ +SL N L
Sbjct: 140 LYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQL 193
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 632 KVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDR-DGTIV--AIKVLNLQLQGAS--KS 686
K E +L F+ ++G G FGSV + + DG+ V A+K+L + +S +
Sbjct: 12 KEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEE 71
Query: 687 FAAECRALRNIRHRNLVRVITSCSSIDFQGN-DFKALVYQYMPNGSLENWLHPDAIPQTD 745
F E ++ H ++ +++ +G ++ +M +G L +L I +
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP 131
Query: 746 EENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
NL L + +D+A ++YL IH DL N +L ++T V DFG
Sbjct: 132 ------FNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFG 182
Query: 806 LAR 808
L+R
Sbjct: 183 LSR 185
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 66/147 (44%)
Query: 37 LDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEI 96
LDL+S L S L+ LR ++L++N +Q G L LE L+++ N L
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALP 101
Query: 97 PGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEA 156
G L L L RN+L+ P F SL L L++ N L +TSL+
Sbjct: 102 IGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKE 161
Query: 157 ISLAYNSLGGNIPSSLGQLKELKSLGL 183
+ L N L + +L ELK+L L
Sbjct: 162 LRLYNNQLKRVPEGAFDKLTELKTLKL 188
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
Query: 19 FCDWEGITCSPRHRRVTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGR 78
C +G CS + + +V D SK L S + +++ L +N + R
Sbjct: 4 LCKKDGGVCSCNNNKNSV-DCSSKKLTAIPSNIPADT---KKLDLQSNKLSSLPSKAFHR 59
Query: 79 LFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQEN 138
L +L LYL+ N L G L L++ NKL+ F L NL EL + N
Sbjct: 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119
Query: 139 NLTGGIPHFLGNITSLEAISLAYN---SLGGNIPSSLGQLKELK 179
L P ++T L +SL YN SL + L LKEL+
Sbjct: 120 QLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELR 163
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 329 KLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGN 388
+LV+L + +D NQ + P L L +L++ +N+L F L+SL +L L N
Sbjct: 107 QLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYN 166
Query: 389 NNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFN 425
N L V + L +L L L N L +PE F+
Sbjct: 167 NQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFD 202
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 21/178 (11%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGS---GESDEMSFIHSLA 295
AF + L+ L + N + F ++K+L L V N L + G D++
Sbjct: 56 AFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLV------ 109
Query: 296 NCSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQ 355
NL+ L L NQ K +LP P L L + + +N+ + +L
Sbjct: 110 ---NLAELRLDRNQLK-SLP--------PRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT 157
Query: 356 NLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQN 413
+L+ L + +NQL +F L+ L L L NN L V + +L++L +L L +N
Sbjct: 158 SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 8/171 (4%)
Query: 360 LNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAI 419
L+++ N+LS +F L+ L L L +N L + LK L L + N L A+
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ-AL 100
Query: 420 PEEIFNISHMSDSLNFARNHLVGSIPPKI-GNLKVLRMFVVSSNNLSGEIPSEIGSCFYL 478
P +F+ L RN L S+PP++ +L L + N L L
Sbjct: 101 PIGVFDQLVNLAELRLDRNQL-KSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSL 159
Query: 479 QEIYMAENFFRGSIPSSLVSLKDLREIDLSQNNLSGKIP----ISLERLPL 525
+E+ + N + + L +L+ + L N L ++P SLE+L +
Sbjct: 160 KELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKM 209
Score = 38.1 bits (87), Expect = 0.019, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 11/153 (7%)
Query: 322 SIPSE-IGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSS 380
S+PS+ +L L L+ ++ N+ + L+NL+ L + N+L F L +
Sbjct: 51 SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVN 110
Query: 381 LVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHL 440
L +L L N L + P +L +L L L N+L ++P+ +F+ L N L
Sbjct: 111 LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQL 169
Query: 441 VGSIPP----KIGNLKVLRMFVVSSNNLSGEIP 469
+P K+ LK L++ NN +P
Sbjct: 170 -KRVPEGAFDKLTELKTLKL----DNNQLKRVP 197
Score = 33.9 bits (76), Expect = 0.41, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 47 SLSPQI-GNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSR 105
SL P++ +L+ L + L N +Q G +L L+ L L +N L G +
Sbjct: 123 SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTE 182
Query: 106 LIGLYLGRNKLEGSIPSEFVSLYNLKELAIQEN 138
L L L N+L+ F SL LK L +QEN
Sbjct: 183 LKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 30.0 bits (66), Expect = 5.2, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 34/81 (41%)
Query: 104 SRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNS 163
++L LYL NKL+ F L NL+ L + +N L + +L + L N
Sbjct: 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQ 120
Query: 164 LGGNIPSSLGQLKELKSLGLG 184
L P L +L L LG
Sbjct: 121 LKSLPPRVFDSLTKLTYLSLG 141
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASK-SFAAECRAL 694
A + + + +G GSFG VY+G D T VAIK +N + F E +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ ++VR++ S QG ++ + M G L+++L ++ E N +
Sbjct: 68 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 120
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+L + I +A ++A + YL+ + +H DL N ++ + T +GDFG+ R
Sbjct: 121 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASK-SFAAECRAL 694
A + + + +G GSFG VY+G D T VAIK +N + F E +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ ++VR++ S QG ++ + M G L+++L ++ E N +
Sbjct: 70 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 122
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+L + I +A ++A + YL+ + +H DL N ++ + T +GDFG+ R
Sbjct: 123 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASK-SFAAECRAL 694
A + + + +G GSFG VY+G D T VAIK +N + F E +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ ++VR++ S QG ++ + M G L+++L ++ E N +
Sbjct: 83 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 135
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+L + I +A ++A + YL+ + +H DL N ++ + T +GDFG+ R
Sbjct: 136 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASK-SFAAECRAL 694
A + + + +G GSFG VY+G D T VAIK +N + F E +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ ++VR++ S QG ++ + M G L+++L ++ E N +
Sbjct: 76 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 128
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+L + I +A ++A + YL+ + +H DL N ++ + T +GDFG+ R
Sbjct: 129 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASK-SFAAECRAL 694
A + + + +G GSFG VY+G D T VAIK +N + F E +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ ++VR++ S QG ++ + M G L+++L ++ E N +
Sbjct: 77 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 129
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+L + I +A ++A + YL+ + +H DL N ++ + T +GDFG+ R
Sbjct: 130 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 637 SLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRN 696
SL A+D F ++G G+FG V K D AIK + + S + +E L +
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLAS 58
Query: 697 IRHRNLVR----------VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDE 746
+ H+ +VR + +++ + F + +Y N +L + +H + + Q
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQM--EYCENRTLYDLIHSENLNQ--- 113
Query: 747 ENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL 806
+ DE L + A+ Y+H + IH DLKP NI +D + +GDFGL
Sbjct: 114 QRDEYWRLFR--------QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGL 162
Query: 807 AR 808
A+
Sbjct: 163 AK 164
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY I+A+KVL L+ G E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F + L+ +Y P G++ L Q + DE R T +
Sbjct: 66 RHPNILRLYGY-----FHDSTRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 114
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
++A+A+ Y H + IH D+KP N+LL + + DFG
Sbjct: 115 ------TELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASK-SFAAECRAL 694
A + + + +G GSFG VY+G D T VAIK +N + F E +
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ ++VR++ S QG ++ + M G L+++L ++ E N +
Sbjct: 105 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 157
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+L + I +A ++A + YL+ + +H DL N ++ + T +GDFG+ R
Sbjct: 158 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASK-SFAAECRAL 694
A + + + +G GSFG VY+G D T VAIK +N + F E +
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ ++VR++ S QG ++ + M G L+++L ++ E N +
Sbjct: 74 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 126
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+L + I +A ++A + YL+ + +H DL N ++ + T +GDFG+ R
Sbjct: 127 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASK-SFAAECRAL 694
A + + + +G GSFG VY+G D T VAIK +N + F E +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ ++VR++ S QG ++ + M G L+++L ++ E N +
Sbjct: 77 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 129
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+L + I +A ++A + YL+ + +H DL N ++ + T +GDFG+ R
Sbjct: 130 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAI-KVLNLQLQGASKSFA-AECRALRNIRHRNLVRVITS 708
IG GS+G V+K G IVAI K L + K A E R L+ ++H NLV ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
F+ LV++Y + L E + R + SI
Sbjct: 71 -----FRRKRRLHLVFEYCDHTVLH------------ELDRYQRGVPEHLVKSITWQTLQ 113
Query: 769 AVDYLH-HHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
AV++ H H+C IH D+KP NIL+ + + DFG ARL
Sbjct: 114 AVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARL 151
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASK-SFAAECRAL 694
A + + + +G GSFG VY+G D T VAIK +N + F E +
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ ++VR++ S QG ++ + M G L+++L ++ E N +
Sbjct: 76 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 128
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+L + I +A ++A + YL+ + +H DL N ++ + T +GDFG+ R
Sbjct: 129 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 37 LDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEI 96
LDL+S GL L+ L ++L N +Q G L L L L++N L
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 97 PGNLSYCSRLIGLYLGRNKLEGSIPSE-FVSLYNLKELAIQENNLTGGIPHFLGNITSLE 155
G + ++L LYLG N+L+ S+PS F L LKEL + N L +T+L+
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158
Query: 156 AISLAYNSLGGNIPSSLGQLKELKSLGLGG 185
+SL+ N L + +L +L+++ L G
Sbjct: 159 TLSLSTNQLQSVPHGAFDRLGKLQTITLFG 188
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 330 LVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNN 389
L L + +D+NQ + L L L + +NQL+ F +L+ L KL LG N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 390 NLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIP---- 445
L + L +L L L N L +IP F+ +L+ + N L S+P
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQL-QSVPHGAF 175
Query: 446 PKIGNLKVLRMF 457
++G L+ + +F
Sbjct: 176 DRLGKLQTITLF 187
Score = 37.4 bits (85), Expect = 0.036, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 54 NLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGR 113
+L+ L + L+NN + G L +L+ LYL N L G ++L L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT 140
Query: 114 NKLEGSIPS-EFVSLYNLKELAIQENNLTGGIPH-FLGNITSLEAISLAYNSL 164
N+L+ SIP+ F L NL+ L++ N L +PH + L+ I+L N
Sbjct: 141 NQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQF 191
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 15/142 (10%)
Query: 298 SNLSFLNLVANQFK----GALPHSIVSGSIPSEIGKLVSLYLIEMDH-----------NQ 342
+ L++LNL NQ + G G++ +L SL L DH NQ
Sbjct: 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQ 118
Query: 343 FEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNL 402
+ RL L+ L + NQL +F L++L L L N L V + L
Sbjct: 119 LKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRL 178
Query: 403 KQLALLHLFQNDLSGAIPEEIF 424
+L + LF N + E ++
Sbjct: 179 GKLQTITLFGNQFDCSRCETLY 200
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 37 LDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEI 96
LDL+S GL L+ L ++L N +Q G L L L L++N L
Sbjct: 40 LDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLP 99
Query: 97 PGNLSYCSRLIGLYLGRNKLEGSIPSE-FVSLYNLKELAIQENNLTGGIPHFLGNITSLE 155
G + ++L LYLG N+L+ S+PS F L LKEL + N L +T+L+
Sbjct: 100 LGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQ 158
Query: 156 AISLAYNSLGGNIPSSLGQLKELKSLGLGG 185
+SL+ N L + +L +L+++ L G
Sbjct: 159 TLSLSTNQLQSVPHGAFDRLGKLQTITLFG 188
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 330 LVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNN 389
L L + +D+NQ + L L L + +NQL+ F +L+ L KL LG N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 390 NLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIP---- 445
L + L +L L L N L +IP F+ +L+ + N L S+P
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQL-QSVPHGAF 175
Query: 446 PKIGNLKVLRMF 457
++G L+ + +F
Sbjct: 176 DRLGKLQTITLF 187
Score = 37.4 bits (85), Expect = 0.036, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 54 NLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGR 113
+L+ L + L+NN + G L +L+ LYL N L G ++L L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT 140
Query: 114 NKLEGSIPS-EFVSLYNLKELAIQENNLTGGIPH-FLGNITSLEAISLAYNSL 164
N+L+ SIP+ F L NL+ L++ N L +PH + L+ I+L N
Sbjct: 141 NQLQ-SIPAGAFDKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQF 191
Score = 35.0 bits (79), Expect = 0.18, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 52/133 (39%), Gaps = 15/133 (11%)
Query: 298 SNLSFLNLVANQFK----GALPHSIVSGSIPSEIGKLVSLYLIEMDH-----------NQ 342
+ L++LNL NQ + G G++ +L SL L DH NQ
Sbjct: 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQ 118
Query: 343 FEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNL 402
+ RL L+ L + NQL +F L++L L L N L V + L
Sbjct: 119 LKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRL 178
Query: 403 KQLALLHLFQNDL 415
+L + LF N
Sbjct: 179 GKLQTITLFGNQF 191
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
IG GS G V T G VA+K ++L+ Q + E +R+ H N+V + +S
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS-- 110
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+ D +V +++ G+L D + T ++I ++ + V A+
Sbjct: 111 ---YLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQI--------ATVCLSVLRAL 154
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL-ARLRQEVPNNQ 817
YLH+ + IH D+K +ILL ++ + DFG A++ +EVP +
Sbjct: 155 SYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK 199
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 65 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 113
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
++A+A+ Y H + IH D+KP N+LL + + DFG
Sbjct: 114 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 152
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 114
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
++A+A+ Y H + IH D+KP N+LL + + DFG
Sbjct: 115 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 114
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
++A+A+ Y H + IH D+KP N+LL + + DFG
Sbjct: 115 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 70 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 118
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
++A+A+ Y H + IH D+KP N+LL + + DFG
Sbjct: 119 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 157
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 114
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
++A+A+ Y H + IH D+KP N+LL + + DFG
Sbjct: 115 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 117
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
++A+A+ Y H + IH D+KP N+LL + + DFG
Sbjct: 118 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 63 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 111
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
++A+A+ Y H + IH D+KP N+LL + + DFG
Sbjct: 112 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFG 150
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 29/171 (16%)
Query: 649 HLIGIGSFGSVYKGTFDRDGT---IVAIKVLNL-QLQGASKSFAAECRALRNIRHRNLVR 704
+IG G FG V G G VAIK L + + F +E + H N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 705 ---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
V+T + + ++ ++M NGSL+++L Q D + I+ + +L I+
Sbjct: 73 LEGVVTKSTPV--------MIITEFMENGSLDSFLR-----QNDGQFTVIQLVGMLRGIA 119
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ + ++Y+H L NIL+++NL V DFGL+R ++
Sbjct: 120 AGMKYLADMNYVHRA---------LAARNILVNSNLVCKVSDFGLSRFLED 161
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 23/170 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 116
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A+A+ Y H + IH D+KP N+LL + + +FG +
Sbjct: 117 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS 157
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 33/218 (15%)
Query: 612 RRRGGSGKEPSEPI-LRRALRKVSYESLLKATD-----GFSSTHL-----IGIGSFGSVY 660
R+ G ++P P +R ++VS+E A G ++L IG GS G V
Sbjct: 32 RQENGMPEKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVC 91
Query: 661 KGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFK 720
T G +VA+K ++L+ Q + E +R+ +H N+V + S + D
Sbjct: 92 IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDEL 146
Query: 721 ALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEP 780
+V +++ G+L D + T ++I ++ + V A+ LH
Sbjct: 147 WVVMEFLEGGALT-----DIVTHTRMNEEQI--------AAVCLAVLQALSVLHAQG--- 190
Query: 781 TIHCDLKPSNILLDNNLTAHVGDFGL-ARLRQEVPNNQ 817
IH D+K +ILL ++ + DFG A++ +EVP +
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 228
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 651 IGIGSFGSVYKGTFDRD------GTIVAIKVLNLQLQGASK-SFAAECRALRNIRHRNLV 703
+G GSFG VY+G RD T VA+K +N + F E ++ ++V
Sbjct: 24 LGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRNLTLLERI 760
R++ S +V + M +G L+++L P+A E N TL E I
Sbjct: 83 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEA-----ENNPGRPPPTLQEMI 132
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+A ++A + YL+ + +H DL N ++ ++ T +GDFG+ R
Sbjct: 133 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
IG GS G V T G +VA+K ++L+ Q + E +R+ +H N+V + S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 89
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+ D +V +++ G+L D + T ++I ++ + V A+
Sbjct: 90 ---YLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQI--------AAVCLAVLQAL 133
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL-ARLRQEVPNNQ 817
LH + IH D+K +ILL ++ + DFG A++ +EVP +
Sbjct: 134 SVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 178
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
IG GS G V T G +VA+K ++L+ Q + E +R+ +H N+V + S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 85
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+ D +V +++ G+L D + T ++I ++ + V A+
Sbjct: 86 ---YLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQI--------AAVCLAVLQAL 129
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL-ARLRQEVPNNQ 817
LH + IH D+K +ILL ++ + DFG A++ +EVP +
Sbjct: 130 SVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASK-SFAAECRAL 694
A + + + +G GSFG VY+G D T VAIK +N + F E +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ ++VR++ S QG ++ + M G L+++L ++ E N +
Sbjct: 70 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR--SLRPEMENNPVLAPP 122
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+L + I +A ++A + YL+ + +H DL N + + T +GDFG+ R
Sbjct: 123 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 651 IGIGSFGSVYKGTFDRD------GTIVAIKVLNLQLQGASK-SFAAECRALRNIRHRNLV 703
+G GSFG VY+G RD T VA+K +N + F E ++ ++V
Sbjct: 25 LGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRNLTLLERI 760
R++ S +V + M +G L+++L P+A E N TL E I
Sbjct: 84 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEA-----ENNPGRPPPTLQEMI 133
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+A ++A + YL+ + +H DL N ++ ++ T +GDFG+ R
Sbjct: 134 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--------QLQGASKSFAAECRALRN 696
+ +IG G V + G A+K++ + QL+ ++ E LR
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 697 IR-HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+ H +++ +I S ++ + F LV+ M G L ++L E L+
Sbjct: 156 VAGHPHIITLIDS-----YESSSFMFLVFDLMRKGELFDYL------------TEKVALS 198
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
E SI + AV +LH + +H DLKP NILLD+N+ + DFG +
Sbjct: 199 EKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 651 IGIGSFGSVYKGTFDRD------GTIVAIKVLNLQLQGASK-SFAAECRALRNIRHRNLV 703
+G GSFG VY+G RD T VA+K +N + F E ++ ++V
Sbjct: 25 LGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRNLTLLERI 760
R++ S +V + M +G L+++L P+A E N TL E I
Sbjct: 84 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEA-----ENNPGRPPPTLQEMI 133
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+A ++A + YL+ + +H DL N ++ ++ T +GDFG+ R
Sbjct: 134 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 651 IGIGSFGSVYKGTFDRD------GTIVAIKVLNLQLQGASK-SFAAECRALRNIRHRNLV 703
+G GSFG VY+G RD T VA+K +N + F E ++ ++V
Sbjct: 22 LGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRNLTLLERI 760
R++ S +V + M +G L+++L P+A E N TL E I
Sbjct: 81 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEA-----ENNPGRPPPTLQEMI 130
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+A ++A + YL+ + +H DL N ++ ++ T +GDFG+ R
Sbjct: 131 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 651 IGIGSFGSVYKGTFDRD------GTIVAIKVLNLQLQGASK-SFAAECRALRNIRHRNLV 703
+G GSFG VY+G RD T VA+K +N + F E ++ ++V
Sbjct: 25 LGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRNLTLLERI 760
R++ S +V + M +G L+++L P+A E N TL E I
Sbjct: 84 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEA-----ENNPGRPPPTLQEMI 133
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+A ++A + YL+ + +H DL N ++ ++ T +GDFG+ R
Sbjct: 134 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 651 IGIGSFGSVYKGTFDRD------GTIVAIKVLNLQLQGASK-SFAAECRALRNIRHRNLV 703
+G GSFG VY+G RD T VA+K +N + F E ++ ++V
Sbjct: 25 LGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRNLTLLERI 760
R++ S +V + M +G L+++L P+A E N TL E I
Sbjct: 84 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEA-----ENNPGRPPPTLQEMI 133
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+A ++A + YL+ + +H DL N ++ ++ T +GDFG+ R
Sbjct: 134 QMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 6/180 (3%)
Query: 257 FGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHS-LANCSNLSFLNLVANQFKGALP 315
FG S+ + D+ + ++ N LG + + + F HS L S S + N +
Sbjct: 370 FGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 429
Query: 316 HSIVSGSIPSEIGKLVSLYLIEMDHNQF-EGKIPEEMSRLQNLQFLNMRHNQLSGEIPSS 374
H+ + L SL +++M N F E +P+ + L+NL FL++ QL P++
Sbjct: 430 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489
Query: 375 FGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLN 434
F +LSSL L + +N L V L L + L N + P I ++S LN
Sbjct: 490 FNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR----IDYLSRWLN 545
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 160/437 (36%), Gaps = 83/437 (18%)
Query: 52 IGNLSFLREIHLSNNTIQG-KIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLY 110
IG+L L+E+++++N IQ K+P L LE L LS N + YC+ L L+
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS------IYCTDLRVLH 173
Query: 111 ----LGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGG 166
L + P F+ KE+ + + L N SL + L G
Sbjct: 174 QMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLR-------NNFDSLNVMKTCIQGLAG 226
Query: 167 NIPSSL--------GQLKELKSLGLGGTIPPSIYNLSLLANFSVPENRXXXXXXXXXXXX 218
L G L++ L G L N ++ E R
Sbjct: 227 LEVHRLVLGEFRNEGNLEKFDKSALEG-----------LCNLTIEEFRLAYLDYYLDDII 275
Query: 219 XXXXQLFQISNNFFSGSFPLA---------FSNASNLQSLEILGNNFFGKLSVNFGDMKS 269
L +S SF L FS Q LE++ N FG+ +KS
Sbjct: 276 DLFNCLTNVS------SFSLVSVTIERVKDFSYNFGWQHLELV-NCKFGQFPT--LKLKS 326
Query: 270 LAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVAN--QFKGALPHSIVSGS----I 323
L L N G+ S+ + +L FL+L N FKG S + +
Sbjct: 327 LKRLTFTSNKGGNAFSE--------VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYL 378
Query: 324 PSEIGKLVS-----LYLIEMDHNQFEGKIPEEMSR------LQNLQFLNMRHNQLSGEIP 372
+++ L L +++H F+ ++MS L+NL +L++ H
Sbjct: 379 DLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 438
Query: 373 SSFGNLSSLVKL-ILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSD 431
F LSSL L + GN+ +P L+ L L L Q L P ++S +
Sbjct: 439 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL-Q 497
Query: 432 SLNFARNHLVGSIPPKI 448
LN A N L S+P I
Sbjct: 498 VLNMASNQL-KSVPDGI 513
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN---LQLQGASKSFAAECRALRNIRH 699
+ F +L+G GSF VY+ G VAIK+++ + G + E + ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
+++ + F+ +++ LV + NG + +L P ++ E +
Sbjct: 71 PSILELYNY-----FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH------ 119
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + + YLH H +H DL SN+LL N+ + DFGLA
Sbjct: 120 -----QIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
IG GS G V T G +VA+K ++L+ Q + E +R+ +H N+V + S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 96
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+ D +V +++ G+L D + T ++I ++ + V A+
Sbjct: 97 ---YLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQI--------AAVCLAVLQAL 140
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL-ARLRQEVPNNQ 817
LH + IH D+K +ILL ++ + DFG A++ +EVP +
Sbjct: 141 SVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 185
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 22/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
F L+G G+FG V G A+K+L ++ A A E R L+N RH
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
L + S FQ +D V +Y G L L + + D
Sbjct: 70 LTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR------------F 112
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ SA+DYLH ++ ++ DLK N++LD + + DFGL +
Sbjct: 113 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGAS-KSFAAECRALRNIRHRNLVRVITS 708
IG G+F V G VA+K+++ QL +S + E R ++ + H N+V++
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ LV +Y G + ++L + E + R + S
Sbjct: 75 IET-----EKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQ------------IVS 117
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
AV Y H Q+ +H DLK N+LLD ++ + DFG +
Sbjct: 118 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
IG GS G V T G +VA+K ++L+ Q + E +R+ +H N+V + S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-- 94
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+ D +V +++ G+L D + T ++I ++ + V A+
Sbjct: 95 ---YLVGDELWVVMEFLEGGALT-----DIVTHTRMNEEQI--------AAVCLAVLQAL 138
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL-ARLRQEVPNNQ 817
LH + IH D+K +ILL ++ + DFG A++ +EVP +
Sbjct: 139 SVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 183
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 22/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
F L+G G+FG V G A+K+L ++ A A E R L+N RH
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 212
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
L + S FQ +D V +Y G L L + + D
Sbjct: 213 LTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR------------F 255
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ SA+DYLH ++ ++ DLK N++LD + + DFGL +
Sbjct: 256 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 22/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
F L+G G+FG V G A+K+L ++ A A E R L+N RH
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 70
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
L + S FQ +D V +Y G L L + + D
Sbjct: 71 LTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR------------F 113
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ SA+DYLH ++ ++ DLK N++LD + + DFGL +
Sbjct: 114 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 81/165 (49%), Gaps = 29/165 (17%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQ-LQGASKSFAAECRALRNIRHRNLVR---VI 706
+G G++ +VYKG +VA+K + L+ +GA + E L++++H N+V +I
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI-D 765
+ S+ LV++Y+ + L+ +L D+ N+ + + + +
Sbjct: 70 HTEKSL--------TLVFEYL-DKDLKQYL------------DDCGNIINMHNVKLFLFQ 108
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLR 810
+ + Y H ++ +H DLKP N+L++ + DFGLAR +
Sbjct: 109 LLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAK 150
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 22/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
F L+G G+FG V G A+K+L ++ A A E R L+N RH
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
L + S FQ +D V +Y G L L + + D
Sbjct: 210 LTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR------------F 252
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ SA+DYLH ++ ++ DLK N++LD + + DFGL +
Sbjct: 253 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 22/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
F L+G G+FG V G A+K+L ++ A A E R L+N RH
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 71
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
L + S FQ +D V +Y G L L + + D
Sbjct: 72 LTALKYS-----FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR------------F 114
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ SA+DYLH ++ ++ DLK N++LD + + DFGL +
Sbjct: 115 YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 24/173 (13%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIK-VLNLQLQGASKSFAA-ECRALRN 696
++ + + + L+G GS+G V K G IVAIK L K A E + L+
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENW-LHPDAIPQTDEENDEIRNLT 755
+RH NLV ++ C LV++++ + L++ L P+ + +
Sbjct: 81 LRHENLVNLLEVCKK-----KKRWYLVFEFVDHTILDDLELFPNGL-----------DYQ 124
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++++ I + + + H H IH D+KP NIL+ + + DFG AR
Sbjct: 125 VVQKYLFQI--INGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFAR 172
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASK-SFAAECRAL 694
A + + + +G GSFG VY+G D T VAIK +N + F E +
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ ++VR++ S QG ++ + M G L+++L ++ N +
Sbjct: 83 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR--SLRPAMANNPVLAPP 135
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+L + I +A ++A + YL+ + +H DL N ++ + T +GDFG+ R
Sbjct: 136 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 30/164 (18%)
Query: 654 GSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITS---CS 710
G FG V+K + VA+K+ +Q + + ++ E +L ++H N+++ I + +
Sbjct: 35 GRFGCVWKAQLLNE--YVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
S+D L+ + GSL ++L + + E IA +A +
Sbjct: 92 SVDVD----LWLITAFHEKGSLSDFLKANVVSWN-------------ELCHIAETMARGL 134
Query: 771 DYLHHHC------QEPTI-HCDLKPSNILLDNNLTAHVGDFGLA 807
YLH +P I H D+K N+LL NNLTA + DFGLA
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA-----ECRALRNIRH 699
F L+G G++G V T G IVAIK +++ K A E + L++ +H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIK----KIEPFDKPLFALRTLREIKILKHFKH 68
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
N++ + F+ + ++ + M QTD + +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELM---------------QTDLHRVISTQMLSDDH 113
Query: 760 ISIAI-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQS 818
I I AV LH IH DLKPSN+L+++N V DFGLAR+ E + S
Sbjct: 114 IQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 819 SSVG 822
G
Sbjct: 171 EPTG 174
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA-----ECRALRNIRH 699
F L+G G++G V T G IVAIK +++ K A E + L++ +H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIK----KIEPFDKPLFALRTLREIKILKHFKH 68
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
N++ + F+ + ++ + M QTD + +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELM---------------QTDLHRVISTQMLSDDH 113
Query: 760 ISIAI-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQS 818
I I AV LH IH DLKPSN+L+++N V DFGLAR+ E + S
Sbjct: 114 IQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 819 SSVG 822
G
Sbjct: 171 EPTG 174
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA-----ECRALRNIRH 699
F L+G G++G V T G IVAIK +++ K A E + L++ +H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIK----KIEPFDKPLFALRTLREIKILKHFKH 68
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
N++ + F+ + ++ + M QTD + +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELM---------------QTDLHRVISTQMLSDDH 113
Query: 760 ISIAI-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQS 818
I I AV LH IH DLKPSN+L+++N V DFGLAR+ E + S
Sbjct: 114 IQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 819 SSVG 822
G
Sbjct: 171 EPTG 174
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRN 696
L + + F IG G++G VYK G +VA+K + L + +G + E L+
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
+ H N+V+++ + + LV+++ LH D D L L
Sbjct: 63 LNHPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPL 108
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 109 IK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 33/218 (15%)
Query: 612 RRRGGSGKEPSEPI-LRRALRKVSYESLLKA-----TDGFSSTHL-----IGIGSFGSVY 660
R+ G ++P P +R ++VS+E A G ++L IG GS G V
Sbjct: 109 RQENGMPEKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVC 168
Query: 661 KGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFK 720
T G +VA+K ++L+ Q + E +R+ +H N+V + S + D
Sbjct: 169 IATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS-----YLVGDEL 223
Query: 721 ALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEP 780
+V +++ G+L D + T ++I ++ + V A+ LH
Sbjct: 224 WVVMEFLEGGALT-----DIVTHTRMNEEQI--------AAVCLAVLQALSVLHAQG--- 267
Query: 781 TIHCDLKPSNILLDNNLTAHVGDFGL-ARLRQEVPNNQ 817
IH D+K +ILL ++ + DFG A++ +EVP +
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 305
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV+++ LH D +T + + + L
Sbjct: 64 HPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDL--KTFMDASALTGIPLPL 107
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 108 IKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 26/187 (13%)
Query: 628 RALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSF 687
R+L ++ +L F L+G G++G VYKG + G + AIKV+++ +
Sbjct: 9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEI 67
Query: 688 AAECRALRNI-RHRNLVRVITSCSSIDFQGNDFK-ALVYQYMPNGSLENWLHPDAIPQTD 745
E L+ HRN+ + + G D + LV ++ GS+
Sbjct: 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV------------- 114
Query: 746 EENDEIRNL---TLLER--ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAH 800
D I+N TL E I ++ + +LH H IH D+K N+LL N
Sbjct: 115 --TDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVK 169
Query: 801 VGDFGLA 807
+ DFG++
Sbjct: 170 LVDFGVS 176
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRN 696
L + + F IG G++G VYK G +VA+K + L + +G + E L+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
+ H N+V+++ + + LV+++ LH D D L L
Sbjct: 62 LNHPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPL 107
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 108 IK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 26/176 (14%)
Query: 651 IGIGSFGSVYKGTF----DRDGTI-VAIKVLNLQLQGASK-SFAAECRALRNI-RHRNLV 703
+G G+FG V + T D + VA+K+L K + +E + + ++ +H N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH--------PDAIPQTDEE---NDEIR 752
++ +C+ G ++ +Y G L N+L P P D E ++ R
Sbjct: 99 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
L L + + + VA + +L + IH D+ N+LL N A +GDFGLAR
Sbjct: 154 PLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 148
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 149 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 70 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 113
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 114 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGASK-SFAAECRAL 694
A + + + +G GSFG VY+G D T VAIK +N + F E +
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ ++VR++ S QG ++ + M G L+++L ++ N +
Sbjct: 73 KEFNCHHVVRLLGVVS----QGQP-TLVIMELMTRGDLKSYLR--SLRPAMANNPVLAPP 125
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+L + I +A ++A + YL+ + +H DL N ++ + T +GDFG+ R
Sbjct: 126 SLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 39/204 (19%)
Query: 616 GSGKEPSEPILR--RALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAI 673
G EP +P + + L ++ E+ L+ ++G G FG+V+KG + +G + I
Sbjct: 8 GESIEPLDPSEKANKVLARIFKETELR------KLKVLGSGVFGTVHKGVWIPEGESIKI 61
Query: 674 KVLNLQLQGAS--KSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMP 728
V ++ S +SF A A+ ++ H ++VR++ C Q LV QY+P
Sbjct: 62 PVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ------LVTQYLP 115
Query: 729 NGSLENWL--HPDAI-PQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
GSL + + H A+ PQ LL ++ + +A + YL H +H +
Sbjct: 116 LGSLLDHVRQHRGALGPQ------------LL--LNWGVQIAKGMYYLEEHG---MVHRN 158
Query: 786 LKPSNILLDNNLTAHVGDFGLARL 809
L N+LL + V DFG+A L
Sbjct: 159 LAARNVLLKSPSQVQVADFGVADL 182
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 21/172 (12%)
Query: 228 SNNFFSGSFPLAFSNASNLQSLEILGN---NFFGKLSVNFGDMKSLAYLNVAINNLGSGE 284
+ N F+ S S LQ+L + N NFF K+++ +M SL L+V++N+L S
Sbjct: 361 TQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF-KVALMTKNMSSLETLDVSLNSLNSHA 419
Query: 285 SDEMSFIHSLANCSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFE 344
D + A ++ LNL +N G+ V +P ++ K++ L HN
Sbjct: 420 YDR-----TCAWAESILVLNLSSNMLTGS-----VFRCLPPKV-KVLDL------HNNRI 462
Query: 345 GKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIP 396
IP++++ LQ LQ LN+ NQL F L+SL + L +N P
Sbjct: 463 MSIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 7/165 (4%)
Query: 332 SLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSG--EIPSSFGNLSSLVKLILGNN 389
S + N F + + S L+ LQ L ++ N L ++ N+SSL L + N
Sbjct: 354 SFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLN 413
Query: 390 NL-SGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKI 448
+L S + + + +L+L N L+G++ + + D N+ + SIP +
Sbjct: 414 SLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLD----LHNNRIMSIPKDV 469
Query: 449 GNLKVLRMFVVSSNNLSGEIPSEIGSCFYLQEIYMAENFFRGSIP 493
+L+ L+ V+SN L LQ I++ +N + + P
Sbjct: 470 THLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRN 696
L + + F IG G++G VYK G +VA+K + L + +G + E L+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
+ H N+V+++ + + LV++++ + L++++ A+ L L
Sbjct: 62 LNHPNIVKLLDVIHT-----ENKLYLVFEFL-SMDLKDFMDASALTGI--------PLPL 107
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 108 IK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 31/165 (18%)
Query: 654 GSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCSSID 713
G FG V+K D VA+K+ LQ + + +S E + ++H NL++ I + +
Sbjct: 26 GRFGCVWKAQLMND--FVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAA----E 78
Query: 714 FQGNDFKA---LVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+G++ + L+ + GSL ++L + I T E +A ++ +
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGNII-------------TWNELCHVAETMSRGL 125
Query: 771 DYLHHH---CQ----EPTI-HCDLKPSNILLDNNLTAHVGDFGLA 807
YLH C+ +P+I H D K N+LL ++LTA + DFGLA
Sbjct: 126 SYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRN 696
L + + F IG G++G VYK G +VA+K + L + +G + E L+
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
+ H N+V+++ + + LV++++ + L++++ A+ L L
Sbjct: 61 LNHPNIVKLLDVIHT-----ENKLYLVFEFL-SMDLKDFMDASALTGI--------PLPL 106
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 107 IK--SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 113 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 162
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 163 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGAS-KSFAAECRALRNIRHRNLVRVITS 708
IG G+F V G VAIK+++ QL S + E R ++ + H N+V++
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ L+ +Y G + ++L + E + R + S
Sbjct: 80 IET-----EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ------------IVS 122
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
AV Y H Q+ +H DLK N+LLD ++ + DFG +
Sbjct: 123 AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 113 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 162
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 163 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGAS-KSFAAECRALRNIRHRNLVRVITS 708
IG G+F V G VA+K+++ QL +S + E R ++ + H N+V++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ LV +Y G + ++L + E + R + S
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------------IVS 124
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
AV Y H Q+ +H DLK N+LLD ++ + DFG +
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
++ IG G+ G+VY G VAI+ +NLQ Q + E +R ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ S + D +V +Y+ GSL D + +T + +I ++
Sbjct: 82 YLDS-----YLVGDELWVVMEYLAGGSL-----TDVVTETCMDEGQI--------AAVCR 123
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
+ A+++LH + IH D+K NILL + + + DFG + +S+ VG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 178
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGAS-KSFAAECRALRNIRHRNLVRVITS 708
IG G+F V G VA+K+++ QL +S + E R ++ + H N+V++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ LV +Y G + ++L + E + R + S
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------------IVS 124
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
AV Y H Q+ +H DLK N+LLD ++ + DFG +
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGAS-KSFAAECRALRNIRHRNLVRVITS 708
IG G+F V G VA+K+++ QL +S + E R ++ + H N+V++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ LV +Y G + ++L + E + R + S
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------------IVS 124
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
AV Y H Q+ +H DLK N+LLD ++ + DFG +
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 70 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 113
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 114 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 63 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 106
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 107 SYLFQLLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 637 SLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRN 696
SL A+D F ++G G+FG V K D AIK + + S + +E L +
Sbjct: 1 SLRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVXLLAS 58
Query: 697 IRHRNLVRVITSC----------SSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDE 746
+ H+ +VR + +++ + F + +Y N +L + +H + + Q
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLF--IQXEYCENRTLYDLIHSENLNQ--- 113
Query: 747 ENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL 806
+ DE L + A+ Y+H + IH +LKP NI +D + +GDFGL
Sbjct: 114 QRDEYWRLFR--------QILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGL 162
Query: 807 AR 808
A+
Sbjct: 163 AK 164
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 98 ----CIGVSLQSLP-RFILMELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 147
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 148 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 139 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 188
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 189 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGAS-KSFAAECRALRNIRHRNLVRVITS 708
IG G+F V G VAIK+++ QL S + E R ++ + H N+V++
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ L+ +Y G + ++L + E + R + S
Sbjct: 83 IET-----EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ------------IVS 125
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
AV Y H Q+ +H DLK N+LLD ++ + DFG +
Sbjct: 126 AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV+++ LH D D L L++
Sbjct: 63 HPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK 108
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 109 --SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 26/177 (14%)
Query: 650 LIGIGSFGSVYKGT---FDRDGTIVAIKVLNLQLQGAS---KSFAAECRALRNI-RHRNL 702
++G G+FG V T + G + + V L+ + S ++ +E + + + H N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 703 VRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH-------PDAIPQTD----EENDEI 751
V ++ +C+ G + L+++Y G L N+L D I + EE +++
Sbjct: 112 VNLLGACT---LSGPIY--LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 752 RNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
LT + + A VA +++L + +H DL N+L+ + + DFGLAR
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLAR 220
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV+++ LH D D L L++
Sbjct: 64 HPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK 109
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 110 --SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV+++ LH D D L L++
Sbjct: 63 HPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK 108
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 109 --SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 115 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 164
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 165 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 113 ----CIGVSLQSLP-RFILMELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 162
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 163 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL---NLQLQGASKSFAAECRALRNI 697
A + F +G G FG+VY + I+A+KVL L+ G E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
RH N++R+ F L+ +Y P G++ L Q + DE R T +
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYREL------QKLSKFDEQRTATYI 117
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
++A+A+ Y H + IH D+KP N+LL + + +FG
Sbjct: 118 ------TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFG 156
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 63 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 106
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRN 696
L + + F IG G++G VYK G +VA+K + L + +G + E L+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
+ H N+V+++ + + LV++++ + L+ ++ A+ L L
Sbjct: 62 LNHPNIVKLLDVIHT-----ENKLYLVFEFL-SMDLKKFMDASALTGIP--------LPL 107
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 108 IK--SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 90 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 139
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 140 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV+++ LH D D L L++
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK 106
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 107 --SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV+++ LH D D L L++
Sbjct: 63 HPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK 108
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 109 --SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 116 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 165
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 166 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV+++ LH D D L L++
Sbjct: 62 HPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK 107
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 108 --SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 79/170 (46%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV++++ + L++++ A+ L L++
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEFL-HQDLKDFMDASALTGI--------PLPLIK 106
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 107 --SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 28/172 (16%)
Query: 651 IGIGSFGSVYKGTF-DRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSC 709
IG G FG V+ G + ++D VAIK + + + F E + + H LV++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDK--VAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 710 SSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI-SIAIDVAS 768
LV+++M +G L ++L R L E + + +DV
Sbjct: 92 LE-----QAPICLVFEFMEHGCLSDYLRTQ------------RGLFAAETLLGMCLDVCE 134
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSS 820
+ YL C IH DL N L+ N V DFG+ R V ++Q +S
Sbjct: 135 GMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF---VLDDQYTS 180
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV+++ LH D D L L++
Sbjct: 62 HPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK 107
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 108 --SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV+++ LH D D L L++
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK 106
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 107 --SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 105 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 154
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 155 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 83/198 (41%), Gaps = 36/198 (18%)
Query: 617 SGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDG----TIVA 672
SG P++ +LR +LK T+ ++G G+FG+VYKG + DG VA
Sbjct: 2 SGAAPNQALLR----------ILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVA 50
Query: 673 IKVLNLQLQ-GASKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
IKVL A+K E + + + R++ C + Q LV Q MP G
Sbjct: 51 IKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ------LVTQLMPYGC 104
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI 791
L D + L + ++ + +A + YL +H DL N+
Sbjct: 105 L-----------LDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLAARNV 150
Query: 792 LLDNNLTAHVGDFGLARL 809
L+ + + DFGLARL
Sbjct: 151 LVKSPNHVKITDFGLARL 168
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 98 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 147
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 148 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV+++ LH D D L L++
Sbjct: 62 HPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK 107
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 108 --SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
++ IG G+ G+VY G VAI+ +NLQ Q + E +R ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ S + D +V +Y+ GSL D + +T + +I ++
Sbjct: 82 YLDS-----YLVGDELWVVMEYLAGGSL-----TDVVTETCMDEGQI--------AAVCR 123
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ A+++LH + IH D+K NILL + + + DFG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 63 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 106
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 148
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 149 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 63 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 106
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 31/168 (18%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAA---ECRALRNIRHRNLVR 704
++G G FG+V+KG + +G + I V ++ S +SF A A+ ++ H ++VR
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWL--HPDAI-PQTDEENDEIRNLTLLERIS 761
++ C Q LV QY+P GSL + + H A+ PQ LL ++
Sbjct: 80 LLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQ------------LL--LN 119
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ +A + YL H +H +L N+LL + V DFG+A L
Sbjct: 120 WGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADL 164
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 62 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 105
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 106 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 62 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 105
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 106 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 125 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 174
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+AR
Sbjct: 175 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 62 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 105
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 106 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 62 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 105
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 106 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV+++ LH D D L L++
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK 106
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 107 --SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
++ IG G+ G+VY G VAI+ +NLQ Q + E +R ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ S + D +V +Y+ GSL D + +T + +I ++
Sbjct: 82 YLDS-----YLVGDELWVVMEYLAGGSL-----TDVVTETCMDEGQI--------AAVCR 123
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
+ A+++LH + IH D+K NILL + + + DFG + +S VG
Sbjct: 124 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVG 178
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
++ IG G+ G+VY G VAI+ +NLQ Q + E +R ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ S + D +V +Y+ GSL D + +T + +I ++
Sbjct: 83 YLDS-----YLVGDELWVVMEYLAGGSL-----TDVVTETCMDEGQI--------AAVCR 124
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ A+++LH + IH D+K NILL + + + DFG
Sbjct: 125 ECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 164
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 64 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 107
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 108 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV+++ LH D D L L++
Sbjct: 61 HPNIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK 106
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 107 --SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 4/219 (1%)
Query: 257 FGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHS-LANCSNLSFLNLVANQFKGALP 315
FG +S+ + D+ + ++ N LG + + + F HS L S S + N +
Sbjct: 394 FGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 453
Query: 316 HSIVSGSIPSEIGKLVSLYLIEMDHNQF-EGKIPEEMSRLQNLQFLNMRHNQLSGEIPSS 374
H+ + L SL +++M N F E +P+ + L+NL FL++ QL P++
Sbjct: 454 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 513
Query: 375 FGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLN 434
F +LSSL L + +NN + L L +L N + + +E+ + LN
Sbjct: 514 FNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 573
Query: 435 FARNHLVGSIPPK--IGNLKVLRMFVVSSNNLSGEIPSE 471
+N + + + +K R +V + PS+
Sbjct: 574 LTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 612
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 83/217 (38%), Gaps = 50/217 (23%)
Query: 122 SEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGN-IPSSLGQLKELKS 180
S F+SL NL L I + ++SLE + +A NS N +P +L+ L
Sbjct: 439 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 498
Query: 181 LGLGGTIPPSIYNLSLLANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAF 240
L L QL Q+S P AF
Sbjct: 499 LDLSQC------------------------------------QLEQLS--------PTAF 514
Query: 241 SNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNL 300
++ S+LQ L + NNFF + + + SL L+ ++N++ + + E+ S+L
Sbjct: 515 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP-----SSL 569
Query: 301 SFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIE 337
+FLNL N F H I + LV + +E
Sbjct: 570 AFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERME 606
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 195/530 (36%), Gaps = 99/530 (18%)
Query: 52 IGNLSFLREIHLSNNTIQG-KIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLY 110
IG+L L+E+++++N IQ K+P L LE L LS N + YC+ L L+
Sbjct: 144 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS------IYCTDLRVLH 197
Query: 111 ----LGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGG 166
L + P F+ KE+ + + L N SL + L G
Sbjct: 198 QMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLR-------NNFDSLNVMKTCIQGLAG 250
Query: 167 NIPSSL--------GQLKELKSLGLGGTIPPSIYNLSLLANFSVPENRXXXXXXXXXXXX 218
L G L++ L G L N ++ E R
Sbjct: 251 LEVHRLVLGEFRNEGNLEKFDKSALEG-----------LCNLTIEEFRLAYLDYYLDGII 299
Query: 219 XXXXQLFQISNNFFSGSFPLA---------FSNASNLQSLEILGNNFFGKLSVNFGDMKS 269
L +S SF L FS Q LE++ N FG+ +KS
Sbjct: 300 DLFNCLTNVS------SFSLVSVTIERVKDFSYNFGWQHLELV-NCKFGQFPT--LKLKS 350
Query: 270 LAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVAN--QFKGALPHSIVSGSIPSEI 327
L L N G+ S+ + +L FL+L N FKG S G+I +
Sbjct: 351 LKRLTFTSNKGGNAFSE--------VDLPSLEFLDLSRNGLSFKGCCSQSDF-GTISLKY 401
Query: 328 GKLV----------SLYLIEMDHNQFEGKIPEEMSR------LQNLQFLNMRHNQLSGEI 371
L L L +++H F+ ++MS L+NL +L++ H
Sbjct: 402 LDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 461
Query: 372 PSSFGNLSSLVKL-ILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMS 430
F LSSL L + GN+ +P L+ L L L Q L P ++S +
Sbjct: 462 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 521
Query: 431 DSLNFARNHL--VGSIPPKIGN-LKVLRM----FVVSSNNLSGEIPSEIGSCFYLQEIYM 483
LN + N+ + + P K N L+VL + S PS + + +
Sbjct: 522 -VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF------LNL 574
Query: 484 AENFFRGSIP--SSLVSLKDLREIDLSQNNLSGKIPISLERLPLEYLNLS 531
+N F + S L +KD R++ + + P + +P+ LN++
Sbjct: 575 TQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMPVLSLNIT 624
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 22/149 (14%)
Query: 657 GSVYKGTFDRDGTIVAIKVLNLQLQGASKS--FAAECRALRNIRHRNLVRVITSCSSIDF 714
G ++KG + G + +KVL ++ KS F EC LR H N++ V+ +C S
Sbjct: 24 GELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS--- 78
Query: 715 QGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLH 774
L+ +MP GSL N LH D+ + + A+D+A + +L
Sbjct: 79 PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQS----------QAVKFALDMARGMAFL- 127
Query: 775 HHCQEPTI--HCDLKPSNILLDNNLTAHV 801
H EP I H L ++++D ++TA +
Sbjct: 128 -HTLEPLIPRHA-LNSRSVMIDEDMTARI 154
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 67 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 110
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 111 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 31/163 (19%)
Query: 651 IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVI 706
+G G FG V +KG +D VA+K++ + + F E + + + H LV+
Sbjct: 16 LGSGQFGVVKLGKWKGQYD-----VAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFY 69
Query: 707 TSCSSIDFQGNDFKA-LVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
CS ++ +V +Y+ NG L N+L + L + + + D
Sbjct: 70 GVCS------KEYPIYIVTEYISNGCLLNYLRSHG-----------KGLEPSQLLEMCYD 112
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
V + +L H IH DL N L+D +L V DFG+ R
Sbjct: 113 VCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTR 152
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 651 IGIGSFGSVYKGTFDRD------GTIVAIKVLNLQLQGASK-SFAAECRALRNIRHRNLV 703
+G GSFG VY+G RD T VA+K +N + F E ++ ++V
Sbjct: 26 LGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRNLTLLERI 760
R++ S +V + M +G L+++L P+A E N TL E I
Sbjct: 85 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEA-----ENNPGRPPPTLQEMI 134
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+A ++A + YL+ + +H +L N ++ ++ T +GDFG+ R
Sbjct: 135 QMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV++++ + L+ ++ A+ L L++
Sbjct: 62 HPNIVKLLDVIHT-----ENKLYLVFEFL-SMDLKKFMDASALTGIP--------LPLIK 107
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 108 --SYLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGAS-KSFAAECRALRNIRHRNLVRVITS 708
IG G+F V G VA+++++ QL +S + E R ++ + H N+V++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ LV +Y G + ++L + E + R + S
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------------IVS 124
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
AV Y H Q+ +H DLK N+LLD ++ + DFG +
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGAS-KSFAAECRALRNIRHRNLVRVITS 708
IG G+F V G VA+++++ QL +S + E R ++ + H N+V++
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ LV +Y G + ++L + E + R + S
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------------IVS 124
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
AV Y H Q+ +H DLK N+LLD ++ + DFG +
Sbjct: 125 AVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 24/168 (14%)
Query: 651 IGIGSFGSVYKGTFDRD------GTIVAIKVLNLQLQGASK-SFAAECRALRNIRHRNLV 703
+G GSFG VY+G RD T VA+K +N + F E ++ ++V
Sbjct: 25 LGQGSFGMVYEGN-ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRNLTLLERI 760
R++ S +V + M +G L+++L P+A E N TL E I
Sbjct: 84 RLLGVVSK-----GQPTLVVMELMAHGDLKSYLRSLRPEA-----ENNPGRPPPTLQEMI 133
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+A ++A + YL+ + +H +L N ++ ++ T +GDFG+ R
Sbjct: 134 QMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V +Y G+L +L P + D R +T
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFK 157
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 651 IGIGSFGSVYKGTFD-----RDGTIVAIKVLNLQLQGASKS-FAAECRALRNIRHRNLVR 704
IG G+FG V++ T+VA+K+L + ++ F E + + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLH---PDAIPQTDEENDEIRN-------- 753
++ C+ L+++YM G L +L P + + R
Sbjct: 115 LLGVCAV-----GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 754 -LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
L+ E++ IA VA+ + YL + +H DL N L+ N+ + DFGL+R
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V +Y G+L +L P + D R +T
Sbjct: 103 IIHLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V +Y G+L +L P + D R +T
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 80/189 (42%), Gaps = 32/189 (16%)
Query: 622 SEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN---L 678
+EPI+ R L++V + D F +IG G+F V + G + A+K++N +
Sbjct: 46 AEPIVVR-LKEVRLQR-----DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM 99
Query: 679 QLQGASKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP 738
+G F E L N R + ++ FQ ++ LV +Y G L L
Sbjct: 100 LKRGEVSCFREERDVLVNGDRRWITQL-----HFAFQDENYLYLVMEYYVGGDLLTLLSK 154
Query: 739 --DAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNN 796
+ IP E+ L E I +AID + Y+H D+KP NILLD
Sbjct: 155 FGERIPA------EMARFYLAE-IVMAIDSVHRLGYVHR---------DIKPDNILLDRC 198
Query: 797 LTAHVGDFG 805
+ DFG
Sbjct: 199 GHIRLADFG 207
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 21/170 (12%)
Query: 641 ATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIR 698
+ + F IG G++G VYK G +VA+K + L + +G + E L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N+V+++ + + LV++++ + L+ ++ A+ L L++
Sbjct: 64 HPNIVKLLDVIHT-----ENKLYLVFEHV-DQDLKKFMDASALTGI--------PLPLIK 109
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 110 --SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGAS-KSFAAECRALRNIRHRNLVR---V 705
IG G+F V G VA+K+++ QL S + E R ++ + H N+V+ V
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
I + ++ LV +Y G + ++L + E + R
Sbjct: 83 IETEKTL--------YLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ------------ 122
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ SAV Y H Q+ +H DLK N+LLD ++ + DFG +
Sbjct: 123 IVSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V +Y G+L +L P + D R +T
Sbjct: 103 IITLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V +Y G+L +L P + D R +T
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V +Y G+L +L P + D R +T
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V +Y G+L +L P + D R +T
Sbjct: 103 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
++ IG G+ G+VY G VAI+ +NLQ Q + E +R ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ S + D +V +Y+ GSL D + +T + +I ++
Sbjct: 83 YLDS-----YLVGDELWVVMEYLAGGSL-----TDVVTETCMDEGQI--------AAVCR 124
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
+ A+++LH + IH ++K NILL + + + DFG + +S+ VG
Sbjct: 125 ECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 179
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIK--VLNLQLQGASKSFAAECRALRNIRHRNLVRVITS 708
IG G+FG V+K + G VA+K ++ + +G + E + L+ ++H N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 709 CSSIDFQGNDFKALVY------QYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
C + N KA +Y ++ G L N L TL E +
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL---------------VKFTLSEIKRV 130
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQ 817
+ + + Y+H + +H D+K +N+L+ + + DFGLAR N+Q
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+K + L + +G + E L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV++++ H D +T + + + L
Sbjct: 62 NIVKLLDVIHT-----ENKLYLVFEHV---------HQDL--KTFMDASALTGIPLPLIK 105
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 106 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQG K+F E + +R + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG--KAFKNRELQIMRKLDHCNIV 76
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 127
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 128 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQG K+F E + +R + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG--KAFKNRELQIMRKLDHCNIV 76
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 127
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 128 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V +Y G+L +L P + D R +T
Sbjct: 92 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 146
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 147 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V +Y G+L +L P + D R +T
Sbjct: 90 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 144
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 145 DLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 257 FGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHS-LANCSNLSFLNLVANQFKGALP 315
FG S+ + D+ + ++ N LG + + + F HS L S S + N +
Sbjct: 370 FGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 429
Query: 316 HSIVSGSIPSEIGKLVSLYLIEMDHNQF-EGKIPEEMSRLQNLQFLNMRHNQLSGEIPSS 374
H+ + L SL +++M N F E +P+ + L+NL FL++ QL P++
Sbjct: 430 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 489
Query: 375 FGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLN 434
F +LSSL L + +NN + L L +L N + + +E+ + LN
Sbjct: 490 FNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 549
Query: 435 FARNHLVGSIPPK--IGNLKVLRMFVVSSNNLSGEIPSE 471
+N + + + +K R +V + PS+
Sbjct: 550 LTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 588
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 83/217 (38%), Gaps = 50/217 (23%)
Query: 122 SEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGN-IPSSLGQLKELKS 180
S F+SL NL L I + ++SLE + +A NS N +P +L+ L
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474
Query: 181 LGLGGTIPPSIYNLSLLANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAF 240
L L QL Q+S P AF
Sbjct: 475 LDLSQC------------------------------------QLEQLS--------PTAF 490
Query: 241 SNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNL 300
++ S+LQ L + NNFF + + + SL L+ ++N++ + + E+ S+L
Sbjct: 491 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP-----SSL 545
Query: 301 SFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIE 337
+FLNL N F H I + LV + +E
Sbjct: 546 AFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERME 582
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V +Y G+L +L P + D R +T
Sbjct: 95 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 149
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 150 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVR 704
+G G+FG VY+G D VA+K L + + F E + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C + Q + ++ + M G L+++L +T + +L +L+ + +A
Sbjct: 99 ----CIGVSLQSLP-RFILLELMAGGDLKSFLR-----ETRPRPSQPSSLAMLDLLHVAR 148
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
D+A YL + IH D+ N LL A +GDFG+A+
Sbjct: 149 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNIRHRNLVRVIT 707
LIG G FG VY G + + VAI++++++ K+F E A R RH N+V +
Sbjct: 40 LIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
+C S A++ +L + + I L + + IA ++
Sbjct: 97 ACMS-----PPHLAIITSLCKGRTLYSVVRDAKIV-----------LDVNKTRQIAQEIV 140
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL 806
+ YLH + +H DLK N+ DN + DFGL
Sbjct: 141 KGMGYLH---AKGILHKDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 29/177 (16%)
Query: 651 IGIGSFGSVYKGTFDR---DGTIVAIKVLN---LQLQGASKSFAAECRALRNIRHRNLVR 704
+G GSFG V +G +D VA+K L L A F E A+ ++ HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ + + +V + P GSL D + L A+
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSL-----------LDRLRKHQGHFLLGTLSRYAV 128
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
VA + YL + IH DL N+LL +GDFGL R +P N V
Sbjct: 129 QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHXV 179
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 26/176 (14%)
Query: 651 IGIGSFGSVYKGT-FDRDG----TIVAIKVLNLQLQGAS-KSFAAECRALRNIRHRNLVR 704
+G G FG V K T F G T VA+K+L + + +E L+ + H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLH------PDAIPQTDE------ENDEIR 752
+ +CS + L+ +Y GSL +L P + ++ + R
Sbjct: 91 LYGACSQ-----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
LT+ + IS A ++ + YL + +H DL NIL+ + DFGL+R
Sbjct: 146 ALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 26/176 (14%)
Query: 651 IGIGSFGSVYKGT-FDRDG----TIVAIKVLNLQLQGAS-KSFAAECRALRNIRHRNLVR 704
+G G FG V K T F G T VA+K+L + + +E L+ + H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLH------PDAIPQTDE------ENDEIR 752
+ +CS + L+ +Y GSL +L P + ++ + R
Sbjct: 91 LYGACSQ-----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
LT+ + IS A ++ + YL + +H DL NIL+ + DFGL+R
Sbjct: 146 ALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 29/177 (16%)
Query: 651 IGIGSFGSVYKGTFDR---DGTIVAIKVLN---LQLQGASKSFAAECRALRNIRHRNLVR 704
+G GSFG V +G +D VA+K L L A F E A+ ++ HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ + + +V + P GSL D + L A+
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSL-----------LDRLRKHQGHFLLGTLSRYAV 118
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
VA + YL + IH DL N+LL +GDFGL R +P N V
Sbjct: 119 QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHXV 169
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 76/184 (41%), Gaps = 18/184 (9%)
Query: 293 SLANCSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEM----DHNQFEGKIP 348
S +C NL+ L L +N G + L L+E D+ Q P
Sbjct: 50 SFQSCRNLTILWLHSNALAGI------------DAAAFTGLTLLEQLDLSDNAQLRVVDP 97
Query: 349 EEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALL 408
L +L L++ L P F L++L L L +NNL + ++ +L L L
Sbjct: 98 TTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHL 157
Query: 409 HLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLSGEI 468
L N + ++PE F H D L +NH+ P +L L + +NNLS +
Sbjct: 158 FLHGNRIP-SVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-ML 215
Query: 469 PSEI 472
P+E+
Sbjct: 216 PAEV 219
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 1/153 (0%)
Query: 32 RRVTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNT-IQGKIPGEIGRLFRLEALYLSHN 90
R +T+L L S L G + L+ L ++ LS+N ++ P L L L+L
Sbjct: 55 RNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRC 114
Query: 91 SLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGN 150
L PG + L LYL N L+ + F L NL L + N + H
Sbjct: 115 GLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRG 174
Query: 151 ITSLEAISLAYNSLGGNIPSSLGQLKELKSLGL 183
+ SL+ + L N + P + L L +L L
Sbjct: 175 LHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYL 207
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 1/148 (0%)
Query: 37 LDLKSKGLIGSLSPQ-IGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGE 95
LDL + + P L L +HL +Q PG L L+ LYL N+L
Sbjct: 84 LDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQAL 143
Query: 96 IPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLE 155
L L+L N++ F L++L L + +N++ PH ++ L
Sbjct: 144 PDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLM 203
Query: 156 AISLAYNSLGGNIPSSLGQLKELKSLGL 183
+ L N+L L L+ L+ L L
Sbjct: 204 TLYLFANNLSMLPAEVLVPLRSLQYLRL 231
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 15/129 (11%)
Query: 237 PLAFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLAN 296
P F + LQ L + NN F D+ +L +L + N + S +HSL
Sbjct: 121 PGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDR 180
Query: 297 CSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQN 356
L L N PH+ ++G+L++LYL N E + L++
Sbjct: 181 ------LLLHQNHVARVHPHAF------RDLGRLMTLYLFA---NNLSMLPAEVLVPLRS 225
Query: 357 LQFLNMRHN 365
LQ+L + N
Sbjct: 226 LQYLRLNDN 234
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V Y G+L +L P + D R +T
Sbjct: 103 IINLLGACT----QDGPLYVIV-AYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V +Y G+L +L P + D R +T
Sbjct: 149 IINLLGACT----QDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 203
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 204 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 4/219 (1%)
Query: 257 FGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHS-LANCSNLSFLNLVANQFKGALP 315
FG S+ + D+ + ++ N LG + + + F HS L S S + N +
Sbjct: 75 FGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 134
Query: 316 HSIVSGSIPSEIGKLVSLYLIEMDHNQF-EGKIPEEMSRLQNLQFLNMRHNQLSGEIPSS 374
H+ + L SL +++M N F E +P+ + L+NL FL++ QL P++
Sbjct: 135 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 194
Query: 375 FGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLN 434
F +LSSL L + +NN + L L +L N + + +E+ + LN
Sbjct: 195 FNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 254
Query: 435 FARNHLVGSIPPK--IGNLKVLRMFVVSSNNLSGEIPSE 471
+N + + + +K R +V + PS+
Sbjct: 255 LTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 293
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 76/196 (38%), Gaps = 50/196 (25%)
Query: 122 SEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGN-IPSSLGQLKELKS 180
S F+SL NL L I + ++SLE + +A NS N +P +L+ L
Sbjct: 120 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 179
Query: 181 LGLGGTIPPSIYNLSLLANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAF 240
L L QL Q+S P AF
Sbjct: 180 LDLSQC------------------------------------QLEQLS--------PTAF 195
Query: 241 SNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNL 300
++ S+LQ L + NNFF + + + SL L+ ++N++ + + E+ S+L
Sbjct: 196 NSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFP-----SSL 250
Query: 301 SFLNLVANQFKGALPH 316
+FLNL N F H
Sbjct: 251 AFLNLTQNDFACTCEH 266
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 26/176 (14%)
Query: 651 IGIGSFGSVYKGT-FDRDG----TIVAIKVLNLQLQGAS-KSFAAECRALRNIRHRNLVR 704
+G G FG V K T F G T VA+K+L + + +E L+ + H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLH------PDAIPQTDE------ENDEIR 752
+ +CS + L+ +Y GSL +L P + ++ + R
Sbjct: 91 LYGACSQ-----DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
LT+ + IS A ++ + YL + +H DL NIL+ + DFGL+R
Sbjct: 146 ALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 29/163 (17%)
Query: 651 IGIGSFGSVYKGTF-DRDGTIVAIKVLNLQLQGA--SKSFAAECRALRNIRHRNLVRVIT 707
IG G FG V+ G + ++D VAIK + +GA + F E + + H LV++
Sbjct: 13 IGSGQFGLVHLGYWLNKDK--VAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI-SIAIDV 766
C LV+++M +G L ++L R L E + + +DV
Sbjct: 68 VCLE-----QAPICLVFEFMEHGCLSDYLRTQ------------RGLFAAETLLGMCLDV 110
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ YL C IH DL N L+ N V DFG+ R
Sbjct: 111 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF 150
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 29/163 (17%)
Query: 651 IGIGSFGSVYKGTF-DRDGTIVAIKVLNLQLQGA--SKSFAAECRALRNIRHRNLVRVIT 707
IG G FG V+ G + ++D VAIK + +GA + F E + + H LV++
Sbjct: 18 IGSGQFGLVHLGYWLNKDK--VAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI-SIAIDV 766
C LV+++M +G L ++L R L E + + +DV
Sbjct: 73 VCLE-----QAPICLVFEFMEHGCLSDYLRTQ------------RGLFAAETLLGMCLDV 115
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ YL C IH DL N L+ N V DFG+ R
Sbjct: 116 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF 155
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 29/163 (17%)
Query: 651 IGIGSFGSVYKGTF-DRDGTIVAIKVLNLQLQGA--SKSFAAECRALRNIRHRNLVRVIT 707
IG G FG V+ G + ++D VAIK + +GA + F E + + H LV++
Sbjct: 15 IGSGQFGLVHLGYWLNKDK--VAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI-SIAIDV 766
C LV+++M +G L ++L R L E + + +DV
Sbjct: 70 VCLE-----QAPICLVFEFMEHGCLSDYLRTQ------------RGLFAAETLLGMCLDV 112
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ YL C IH DL N L+ N V DFG+ R
Sbjct: 113 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF 152
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQL---QGASKSFAAECRAL-RNIRHR 700
F +IG GSFG V + A+KVL + + K +E L +N++H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
LV + S FQ D V Y+ G L L R LE
Sbjct: 100 FLVGLHFS-----FQTADKLYFVLDYINGGELFYHLQ--------------RERCFLEPR 140
Query: 761 S--IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQS 818
+ A ++ASA+ YLH ++ DLKP NILLD+ + DFGL ++ + +N +
Sbjct: 141 ARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLC--KENIEHNST 195
Query: 819 SSV 821
+S
Sbjct: 196 TST 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+ + L + +G + E L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 63 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 106
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 107 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 21/168 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHR 700
+ F IG G++G VYK G +VA+ + L + +G + E L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N+V+++ + + LV+++ LH D D L L++
Sbjct: 62 NIVKLLDVIHT-----ENKLYLVFEF---------LHQDLKKFMDASALTGIPLPLIK-- 105
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H H +H DLKP N+L++ + DFGLAR
Sbjct: 106 SYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 29/177 (16%)
Query: 651 IGIGSFGSVYKGTFDR---DGTIVAIKVLN---LQLQGASKSFAAECRALRNIRHRNLVR 704
+G GSFG V +G +D VA+K L L A F E A+ ++ HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ + + +V + P GSL D + L A+
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSL-----------LDRLRKHQGHFLLGTLSRYAV 128
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
VA + YL + IH DL N+LL +GDFGL R +P N V
Sbjct: 129 QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHYV 179
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQG K+F E + +R + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQG--KAFKNRELQIMRKLDHCNIV 76
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQT---------LPVIYVKLY 127
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 128 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 23/166 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKS-FAAECRALRNIRHRNLVRVITSC 709
+G G FG V + G VAIK +L ++ + E + ++ + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 710 SSID-FQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI---D 765
+ ND L +Y G L +L ++ N L+ I D
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYL------------NQFENCCGLKEGPIRTLLSD 129
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
++SA+ YLH + IH DLKP NI+L L + D G A+
Sbjct: 130 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 26/164 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI--RHRNLVRVITS 708
IG G FG V++G + G VA+K+ + + + +S+ E + + RH N++ I +
Sbjct: 50 IGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 104
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ + LV Y +GSL ++L+ + T+ I +A+ AS
Sbjct: 105 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTV-------------TVEGMIKLALSTAS 150
Query: 769 AVDYLHHHC----QEPTI-HCDLKPSNILLDNNLTAHVGDFGLA 807
+ +LH +P I H DLK NIL+ N T + D GLA
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 23/166 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKS-FAAECRALRNIRHRNLVRVITSC 709
+G G FG V + G VAIK +L ++ + E + ++ + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 710 SSID-FQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI---D 765
+ ND L +Y G L +L ++ N L+ I D
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYL------------NQFENCCGLKEGPIRTLLSD 130
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLAR 808
++SA+ YLH + IH DLKP NI+L L + D G A+
Sbjct: 131 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 173
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F IG GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +YMP G + + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYMPGGDM--FSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 74/178 (41%), Gaps = 31/178 (17%)
Query: 651 IGIGSFGSVYKGTFDRDG---TIVAIKVLN---LQLQGASKSFAAECRALRNIRHRNLVR 704
+G GSFG V +G +D VA+K L L A F E A+ ++ HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS-IA 763
+ + + +V + P GSL + L + LL +S A
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKH------------QGHFLLGTLSRYA 117
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
+ VA + YL + IH DL N+LL +GDFGL R +P N V
Sbjct: 118 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHYV 169
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 31/172 (18%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
FS IG GSFG+VY R+ +VAIK ++ + +++ + E R L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 702 LVRVITSCSSIDFQGNDFKA----LVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
+I ++G + LV +Y GS + L P L +
Sbjct: 116 ---------TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKP-----------LQEV 154
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
E ++ + YLH H IH D+K NILL +GDFG A +
Sbjct: 155 EIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASI 203
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 26/164 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI--RHRNLVRVITS 708
IG G FG V++G + G VA+K+ + + + +S+ E + + RH N++ I +
Sbjct: 37 IGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 91
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ + LV Y +GSL ++L+ + T+ I +A+ AS
Sbjct: 92 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTV-------------TVEGMIKLALSTAS 137
Query: 769 AVDYLHHHCQ----EPTI-HCDLKPSNILLDNNLTAHVGDFGLA 807
+ +LH +P I H DLK NIL+ N T + D GLA
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 29/177 (16%)
Query: 651 IGIGSFGSVYKGTFDR---DGTIVAIKVLN---LQLQGASKSFAAECRALRNIRHRNLVR 704
+G GSFG V +G +D VA+K L L A F E A+ ++ HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ + + +V + P GSL D + L A+
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSL-----------LDRLRKHQGHFLLGTLSRYAV 122
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
VA + YL + IH DL N+LL +GDFGL R +P N V
Sbjct: 123 QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHYV 173
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F IG GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +YMP G + + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYMPGGDM--FSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 28/162 (17%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGAS-KSFAAECRALRNIRHRNLVR---V 705
IG G+F V G VA+K+++ QL +S + E R + + H N+V+ V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
I + ++ LV +Y G + ++L + E + R
Sbjct: 82 IETEKTL--------YLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQ------------ 121
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ SAV Y H Q+ +H DLK N+LLD + + DFG +
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
+ F +IG G+FG V + A+K+LN + + ++ A R R++
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN-KWEMLKRAETACFREERDVLVNGD 132
Query: 703 VRVITSCSSIDFQGNDFKALVYQYMPNGSLENWL--HPDAIPQTDEENDEIRNLTLLERI 760
+ IT+ FQ ++ LV Y G L L D +P+ E+ L E +
Sbjct: 133 SKWITTLHYA-FQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPE------EMARFYLAEMV 185
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG-LARLRQEVPNNQSS 819
IAID +V LH+ +H D+KP NIL+D N + DFG +L ++ S
Sbjct: 186 -IAID---SVHQLHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV 235
Query: 820 SVG 822
+VG
Sbjct: 236 AVG 238
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 46.2 bits (108), Expect = 7e-05, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 32/171 (18%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVL----NLQLQGASKSFAAECRALRNIRHRNLVRV 705
+IGIG FG VY+ + D VA+K + + ++ E + ++H N++ +
Sbjct: 14 IIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
C + N LV ++ G L L IP D + N A+
Sbjct: 72 RGVCLK---EPN--LCLVMEFARGGPLNRVLSGKRIPP-----DILVNW--------AVQ 113
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILL----DN----NLTAHVGDFGLAR 808
+A ++YLH P IH DLK SNIL+ +N N + DFGLAR
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 26/164 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI--RHRNLVRVITS 708
IG G FG V++G + G VA+K+ + + + +S+ E + + RH N++ I +
Sbjct: 17 IGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 71
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ + LV Y +GSL ++L+ + T+ I +A+ AS
Sbjct: 72 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTV-------------TVEGMIKLALSTAS 117
Query: 769 AVDYLHHHC----QEPTI-HCDLKPSNILLDNNLTAHVGDFGLA 807
+ +LH +P I H DLK NIL+ N T + D GLA
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 17/167 (10%)
Query: 651 IGIGSFGSVYKGTF----DRDGTI-VAIKVLNLQLQGASK-SFAAECRALRNI-RHRNLV 703
+G G+FG V + T D + VA+K+L K + +E + + ++ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER--IS 761
++ +C+ G ++ +Y G L N+L + + I N TL R +
Sbjct: 114 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ VA + +L + IH D+ N+LL N A +GDFGLAR
Sbjct: 169 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 26/164 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI--RHRNLVRVITS 708
IG G FG V++G + G VA+K+ + + + +S+ E + + RH N++ I +
Sbjct: 14 IGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 68
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ + LV Y +GSL ++L+ + T+ I +A+ AS
Sbjct: 69 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTV-------------TVEGMIKLALSTAS 114
Query: 769 AVDYLHHHC----QEPTI-HCDLKPSNILLDNNLTAHVGDFGLA 807
+ +LH +P I H DLK NIL+ N T + D GLA
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRDG----TIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D T VA+K+L S +E ++ I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN----LTLL 757
++ ++ +C+ Q +V +Y G+L +L P + + N L+
Sbjct: 137 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S A VA ++YL + IH DL N+L+ + + DFGLAR
Sbjct: 192 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 29/177 (16%)
Query: 651 IGIGSFGSVYKGTFDR---DGTIVAIKVLN---LQLQGASKSFAAECRALRNIRHRNLVR 704
+G GSFG V +G +D VA+K L L A F E A+ ++ HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ + + +V + P GSL D + L A+
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSL-----------LDRLRKHQGHFLLGTLSRYAV 118
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
VA + YL + IH DL N+LL +GDFGL R +P N V
Sbjct: 119 QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHYV 169
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 67/167 (40%), Gaps = 23/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
F L+G G+FG V G A+K+L ++ A A E R L+N RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
L + FQ +D V +Y G L + H EE
Sbjct: 67 L-----TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF---------- 109
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ SA++YLH ++ D+K N++LD + + DFGL +
Sbjct: 110 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 26/164 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI--RHRNLVRVITS 708
IG G FG V++G + G VA+K+ + + + +S+ E + + RH N++ I +
Sbjct: 11 IGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 65
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ + LV Y +GSL ++L+ + T+ I +A+ AS
Sbjct: 66 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTV-------------TVEGMIKLALSTAS 111
Query: 769 AVDYLHHHCQ----EPTI-HCDLKPSNILLDNNLTAHVGDFGLA 807
+ +LH +P I H DLK NIL+ N T + D GLA
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 20/173 (11%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA--ECRALRN 696
++ + + IG GSFG DG IK +N+ + + + E L N
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
++H N+V+ S F+ N +V Y G L + +A + D+I L
Sbjct: 80 MKHPNIVQYRES-----FEENGSLYIVMDYCEGGDL--FKRINAQKGVLFQEDQI--LDW 130
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+I +A L H +H D+K NI L + T +GDFG+AR+
Sbjct: 131 FVQICLA---------LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV 174
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 23/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
F L+G G+FG V G A+K+L ++ A A E R L+N RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
L + + FQ +D V +Y G L + H EE
Sbjct: 67 LTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF---------- 109
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ SA++YLH ++ D+K N++LD + + DFGL +
Sbjct: 110 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRD----GTIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D VA+K+L S +E ++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR----NLTLL 757
++ ++ +C+ Q +V Y G+L +L P + D R +T
Sbjct: 103 IINLLGACT----QDGPLYVIV-GYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFK 157
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S +A ++YL + IH DL N+L+ N + DFGLAR
Sbjct: 158 DLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 26/164 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI--RHRNLVRVITS 708
IG G FG V++G + G VA+K+ + + + +S+ E + + RH N++ I +
Sbjct: 12 IGKGRFGEVWRGKWR--GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 66
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ + LV Y +GSL ++L+ + T+ I +A+ AS
Sbjct: 67 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYTV-------------TVEGMIKLALSTAS 112
Query: 769 AVDYLHHHCQ----EPTI-HCDLKPSNILLDNNLTAHVGDFGLA 807
+ +LH +P I H DLK NIL+ N T + D GLA
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 23/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
F L+G G+FG V G A+K+L ++ A A E R L+N RH
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
L + + FQ +D V +Y G L + H EE
Sbjct: 70 LTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF---------- 112
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ SA++YLH ++ D+K N++LD + + DFGL +
Sbjct: 113 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 23/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
F L+G G+FG V G A+K+L ++ A A E R L+N RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
L + + FQ +D V +Y G L + H EE
Sbjct: 67 LTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF---------- 109
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ SA++YLH ++ D+K N++LD + + DFGL +
Sbjct: 110 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 26/175 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIK--VLNLQLQGASKSFAAECRALRNIRHRNLVRVITS 708
IG G+FG V+K + G VA+K ++ + +G + E + L+ ++H N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 709 CSSIDFQGNDFKALVY------QYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
C + N K +Y ++ G L N L TL E +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---------------VKFTLSEIKRV 130
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQ 817
+ + + Y+H + +H D+K +N+L+ + + DFGLAR N+Q
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 23/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
F L+G G+FG V G A+K+L ++ A A E R L+N RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
L + + FQ +D V +Y G L + H EE
Sbjct: 67 LTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF---------- 109
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ SA++YLH ++ D+K N++LD + + DFGL +
Sbjct: 110 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 33/175 (18%)
Query: 651 IGIGSFGSVYKGTF----DRDGTI-VAIKVLNLQLQGASK-SFAAECRALRNI-RHRNLV 703
+G G+FG V + T D + VA+K+L K + +E + + ++ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIA 763
++ +C+ G ++ +Y G L N+L + R L +IA
Sbjct: 114 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKS-----------RVLETDPAFAIA 157
Query: 764 IDVASAVDYLHHHCQ----------EPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
AS D LH Q + IH D+ N+LL N A +GDFGLAR
Sbjct: 158 NSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 75/175 (42%), Gaps = 37/175 (21%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
FS IG GSFG+VY R+ +VAIK ++ + +++ + E R L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 702 LVRVITSCSSIDFQGNDFKA----LVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
+I ++G + LV +Y GS + L P L
Sbjct: 77 ---------TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKP--------------L 112
Query: 758 ERISIAIDVASAVD---YLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + IA A+ YLH H IH D+K NILL +GDFG A +
Sbjct: 113 QEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASI 164
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 614 RGGSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAI 673
RG + R+ L K +E + + + +G G++GSV + G VA+
Sbjct: 17 RGSHMSQERPTFYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV 72
Query: 674 KVLNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
K L+ Q +K E R L++++H N++ L+ + P S
Sbjct: 73 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARS 115
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCD 785
LE + D T ++ N+ ++++ + + + Y+H IH D
Sbjct: 116 LEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRD 170
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKPSN+ ++ + + DFGLAR
Sbjct: 171 LKPSNLAVNEDCELKILDFGLAR 193
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 45 IGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCS 104
I ++S I FL ++L+ N++ ++P EI L L L LSHN L +P L C
Sbjct: 236 IFNISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCF 293
Query: 105 RLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNL 140
+L Y N + ++P EF +L NL+ L ++ N L
Sbjct: 294 QLKYFYFFDN-MVTTLPWEFGNLCNLQFLGVEGNPL 328
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 422 EIFNISHMSDSLNF-ARNHLVGS----IPPKIGNLKVLRMFVVSSNNLSGEIPSEIGSCF 476
+IFNIS +F R +L G+ +P +I NL LR+ +S N L+ +P+E+GSCF
Sbjct: 235 QIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCF 293
Query: 477 YLQEIYMAEN 486
L+ Y +N
Sbjct: 294 QLKYFYFFDN 303
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 292 HSLANCSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEM 351
H+L + SNL N+ AN FK L LYL + ++P E+
Sbjct: 227 HAL-DLSNLQIFNISANIFKYDF---------------LTRLYL----NGNSLTELPAEI 266
Query: 352 SRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALL 408
L NL+ L++ HN+L+ +P+ G+ L K +N+ +P GNL L L
Sbjct: 267 KNLSNLRVLDLSHNRLTS-LPAELGSCFQL-KYFYFFDNMVTTLPWEFGNLCNLQFL 321
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 84 ALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGG 143
AL LS N + I N+ L LYL N L +P+E +L NL+ L + N LT
Sbjct: 228 ALDLS-NLQIFNISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLT-S 284
Query: 144 IPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGG 185
+P LG+ L+ ++++ +P G L L+ LG+ G
Sbjct: 285 LPAELGSCFQLKYFYF-FDNMVTTLPWEFGNLCNLQFLGVEG 325
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 26/175 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIK--VLNLQLQGASKSFAAECRALRNIRHRNLVRVITS 708
IG G+FG V+K + G VA+K ++ + +G + E + L+ ++H N+V +I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 709 CSSIDFQGNDFKALVY------QYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
C + N K +Y ++ G L N L TL E +
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---------------VKFTLSEIKRV 129
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQ 817
+ + + Y+H + +H D+K +N+L+ + + DFGLAR N+Q
Sbjct: 130 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 181
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 26/175 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIK--VLNLQLQGASKSFAAECRALRNIRHRNLVRVITS 708
IG G+FG V+K + G VA+K ++ + +G + E + L+ ++H N+V +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 709 CSSIDFQGNDFKALVY------QYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
C + N K +Y ++ G L N L TL E +
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---------------VKFTLSEIKRV 130
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQ 817
+ + + Y+H + +H D+K +N+L+ + + DFGLAR N+Q
Sbjct: 131 MQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ 182
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 23/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
F L+G G+FG V G A+K+L ++ A A E R L+N RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
L + + FQ +D V +Y G L + H EE
Sbjct: 67 LTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF---------- 109
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ SA++YLH ++ D+K N++LD + + DFGL +
Sbjct: 110 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 31/178 (17%)
Query: 651 IGIGSFGSVYKGTFDR---DGTIVAIKVLN---LQLQGASKSFAAECRALRNIRHRNLVR 704
+G GSFG V +G +D VA+K L L A F E A+ ++ HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS-IA 763
+ + + +V + P GSL + L + + LL +S A
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLR------------KHQGHFLLGTLSRYA 121
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
+ VA + YL + IH DL N+LL +GDFGL R +P N V
Sbjct: 122 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHYV 173
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 614 RGGSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAI 673
RG + R+ L K +E + + + +G G++GSV + G VA+
Sbjct: 16 RGSHMSQERPTFYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV 71
Query: 674 KVLNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
K L+ Q +K E R L++++H N++ L+ + P S
Sbjct: 72 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARS 114
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCD 785
LE + D T ++ N+ ++++ + + + Y+H IH D
Sbjct: 115 LEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRD 169
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKPSN+ ++ + + DFGLAR
Sbjct: 170 LKPSNLAVNEDCELKILDFGLAR 192
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 614 RGGSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAI 673
RG + R+ L K +E + + + +G G++GSV + G VA+
Sbjct: 17 RGSHMSQERPTFYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAV 72
Query: 674 KVLNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
K L+ Q +K E R L++++H N++ L+ + P S
Sbjct: 73 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARS 115
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCD 785
LE + D T ++ N+ ++++ + + + Y+H IH D
Sbjct: 116 LEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRD 170
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKPSN+ ++ + + DFGLAR
Sbjct: 171 LKPSNLAVNEDCELKILDFGLAR 193
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 36/201 (17%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GS + P+ R+ L K +E + + + +G G++GSV + G VA+K
Sbjct: 1 GSQERPT--FYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 54
Query: 676 LNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLE 733
L+ Q +K E R L++++H N++ L+ + P SLE
Sbjct: 55 LSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLE 97
Query: 734 NWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLK 787
+ D T ++ N+ ++++ + + + Y+H IH DLK
Sbjct: 98 EF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLK 152
Query: 788 PSNILLDNNLTAHVGDFGLAR 808
PSN+ ++ + + DFGLAR
Sbjct: 153 PSNLAVNEDCELKILDFGLAR 173
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRALRKV--SYESLLKAT---DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A +ES + T D F +G GSFG V G
Sbjct: 28 KKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETG 87
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 88 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 142
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+P G E + H I + E + A + +YLH I+ D
Sbjct: 143 YVPGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLH---SLDLIYRD 187
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK 210
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 614 RGGSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAI 673
RG + R+ L K +E + + + +G G++GSV + G VA+
Sbjct: 16 RGSHMSQERPTFYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAV 71
Query: 674 KVLNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
K L+ Q +K E R L++++H N++ L+ + P S
Sbjct: 72 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARS 114
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCD 785
LE + D T ++ N+ ++++ + + + Y+H IH D
Sbjct: 115 LEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRD 169
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKPSN+ ++ + + DFGLAR
Sbjct: 170 LKPSNLAVNEDCELKILDFGLAR 192
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 34/203 (16%)
Query: 614 RGGSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAI 673
RG + R+ L K +E + + + +G G++GSV + G VA+
Sbjct: 17 RGSHMSQERPTFYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAV 72
Query: 674 KVLNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGS 731
K L+ Q +K E R L++++H N++ L+ + P S
Sbjct: 73 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARS 115
Query: 732 LENWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCD 785
LE + D T ++ N+ ++++ + + + Y+H IH D
Sbjct: 116 LEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRD 170
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKPSN+ ++ + + DFGLAR
Sbjct: 171 LKPSNLAVNEDCELKILDFGLAR 193
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRDG----TIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D T VA+K+L S +E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN----LTLL 757
++ ++ +C+ Q +V +Y G+L +L P + + N L+
Sbjct: 96 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSK 150
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S A VA ++YL + IH DL N+L+ + + DFGLAR
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 645 FSSTHLIGIGSFGSVY---KGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI---- 697
F ++G G +G V+ K T G I A+KVL + + A +A RNI
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
+H +V +I + FQ L+ +Y+ G L L + I D L
Sbjct: 79 KHPFIVDLIYA-----FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA------CFYL 127
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
IS+A L H Q+ I+ DLKP NI+L++ + DFGL +
Sbjct: 128 AEISMA---------LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 23/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA---AECRALRNIRHRN 701
F L+G G+FG V G A+K+L ++ A A E R L+N RH
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
L + + FQ +D V +Y G L + H EE
Sbjct: 72 LTALKYA-----FQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF---------- 114
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ SA++YLH ++ D+K N++LD + + DFGL +
Sbjct: 115 YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRALRKV--SYESLLKAT---DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A +ES + T D F +G GSFG V G
Sbjct: 8 KKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETG 67
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 122
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+P G E + H I + E + A + +YLH I+ D
Sbjct: 123 YVPGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLH---SLDLIYRD 167
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Query: 630 LRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL--NLQLQGASKSF 687
L+ S++ D + IG G++G V G VAIK + + +K
Sbjct: 41 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 100
Query: 688 AAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEE 747
E + L++ +H N++ I +FK++ Y+ +E+ LH I + +
Sbjct: 101 LRELKILKHFKHDNII-AIKDILRPTVPYGEFKSV---YVVLDLMESDLH--QIIHSSQ- 153
Query: 748 NDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
LTL + + Y+H IH DLKPSN+L++ N +GDFG+A
Sbjct: 154 -----PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMA 205
Query: 808 R 808
R
Sbjct: 206 R 206
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQG--ASKSFAAECRALRNIRHR 700
D + HLIG GS+G V + + +VAIK + + K E L + H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
++V+V+ D + D +V + + + + P LT L
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVY-------------LTELHIK 159
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++ ++ V Y+H +H DLKP+N L++ + + V DFGLAR
Sbjct: 160 TLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 56/135 (41%), Gaps = 3/135 (2%)
Query: 35 TVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVG 94
T + SKGL S G S + L +N +Q G +L +L L LS N +
Sbjct: 10 TEIRCNSKGLT---SVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS 66
Query: 95 EIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSL 154
G ++L LYL NKL+ F L LKELA+ N L +TSL
Sbjct: 67 LPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSL 126
Query: 155 EAISLAYNSLGGNIP 169
+ I L N + P
Sbjct: 127 QKIWLHTNPWDCSCP 141
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 13/137 (9%)
Query: 298 SNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNL 357
S+ + L L +N+ + +LPH + KL L + + NQ + +L L
Sbjct: 28 SSATRLELESNKLQ-SLPHGV--------FDKLTQLTKLSLSQNQIQSLPDGVFDKLTKL 78
Query: 358 QFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSG 417
L + N+L F L+ L +L L N L V L L + L N
Sbjct: 79 TILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138
Query: 418 AIPEEIFNISHMSDSLN 434
+ P I ++S LN
Sbjct: 139 SCPR----IDYLSRWLN 151
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 630 LRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL--NLQLQGASKSF 687
L+ S++ D + IG G++G V G VAIK + + +K
Sbjct: 42 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 101
Query: 688 AAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEE 747
E + L++ +H N++ I +FK++ Y+ +E+ LH +
Sbjct: 102 LRELKILKHFKHDNII-AIKDILRPTVPYGEFKSV---YVVLDLMESDLH--------QI 149
Query: 748 NDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ LTL + + Y+H IH DLKPSN+L++ N +GDFG+A
Sbjct: 150 IHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMA 206
Query: 808 R 808
R
Sbjct: 207 R 207
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRALRKV--SYESLLKAT---DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A +ES + T D F +G GSFG V G
Sbjct: 8 KKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETG 67
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 122
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+P G E + H I + E + A + +YLH I+ D
Sbjct: 123 YVPGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLH---SLDLIYRD 167
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRDG----TIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D T VA+K+L S +E ++ I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN----LTLL 757
++ ++ +C+ Q +V +Y G+L +L P + + N L+
Sbjct: 85 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 139
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S A VA ++YL + IH DL N+L+ + + DFGLAR
Sbjct: 140 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 34/201 (16%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GS + R+ L K +E + + + +G G++GSV + G VA+K
Sbjct: 1 GSHSQERPTFYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 56
Query: 676 LNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLE 733
L+ Q +K E R L++++H N++ L+ + P SLE
Sbjct: 57 LSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLE 99
Query: 734 NWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLK 787
+ D T ++ N+ ++++ + + + Y+H IH DLK
Sbjct: 100 EF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLK 154
Query: 788 PSNILLDNNLTAHVGDFGLAR 808
PSN+ ++ + + DFGLAR
Sbjct: 155 PSNLAVNEDCELKILDFGLAR 175
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRDG----TIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D T VA+K+L S +E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN----LTLL 757
++ ++ +C+ Q +V +Y G+L +L P + + N L+
Sbjct: 96 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 150
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S A VA ++YL + IH DL N+L+ + + DFGLAR
Sbjct: 151 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRDG----TIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D T VA+K+L S +E ++ I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN----LTLL 757
++ ++ +C+ Q +V +Y G+L +L P + + N L+
Sbjct: 88 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 142
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S A VA ++YL + IH DL N+L+ + + DFGLAR
Sbjct: 143 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 645 FSSTHLIGIGSFGSVY---KGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI---- 697
F ++G G +G V+ K T G I A+KVL + + A +A RNI
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLL 757
+H +V +I + FQ L+ +Y+ G L L + I D L
Sbjct: 79 KHPFIVDLIYA-----FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA------CFYL 127
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
IS+A L H Q+ I+ DLKP NI+L++ + DFGL +
Sbjct: 128 AEISMA---------LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 35/210 (16%)
Query: 611 LRRRGGSGKEP------SEPIL-RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGT 663
L ++ GS P P R+ L K +E + + + +G G++GSV
Sbjct: 16 LYKKAGSAAAPFTMSHKERPTFYRQELNKTIWE----VPERYQTLSPVGSGAYGSVCSSY 71
Query: 664 FDRDGTIVAIKVLNLQLQGA--SKSFAAECRALRNIRHRN---LVRVITSCSSIDFQGND 718
+ G +A+K L+ Q +K E R L++++H N L+ V T +S++ + ND
Sbjct: 72 DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLE-EFND 130
Query: 719 FKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQ 778
+ ++ L N + + +D ++ L + + Y+H
Sbjct: 131 --VYLVTHLMGADLNNIVKCQKL-----TDDHVQFLIY--------QILRGLKYIH---S 172
Query: 779 EPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
IH DLKPSN+ ++ + + DFGLAR
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQL---QGASKSFAAECRALRNIRH 699
D F IG GSFG V + + A+K +N Q + ++ E + ++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV + S FQ + +V + G L L Q +E L + E
Sbjct: 75 PFLVNLWYS-----FQDEEDMFMVVDLLLGGDLRYHLQ-----QNVHFKEETVKLFICE- 123
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ A+DYL + + IH D+KP NILLD + H+ DF +A +
Sbjct: 124 ------LVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAM 164
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRN 696
+KA D + +IG G+FG V + A+K+L+ ++ + +F E R +
Sbjct: 72 MKAED-YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 130
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
+ V V C+ FQ + + +V +YMP G L N + +P+
Sbjct: 131 FANSPWV-VQLFCA---FQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK------------ 174
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
+ A +V A+D +H IH D+KP N+LLD + + DFG
Sbjct: 175 WAKFYTA-EVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFG 219
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 651 IGIGSFGSVYKGT---FDRDG----TIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D T VA+K+L S +E ++ I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN----LTLL 757
++ ++ +C+ Q +V +Y G+L +L P + + N L+
Sbjct: 89 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 143
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S A VA ++YL + IH DL N+L+ + + DFGLAR
Sbjct: 144 DLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 34/201 (16%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GS + R+ L K +E + + + +G G++GSV + G VA+K
Sbjct: 11 GSMSQERPTFYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 66
Query: 676 LNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLE 733
L+ Q +K E R L++++H N++ L+ + P SLE
Sbjct: 67 LSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLE 109
Query: 734 NWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLK 787
+ D T ++ N+ ++++ + + + Y+H IH DLK
Sbjct: 110 EF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLK 164
Query: 788 PSNILLDNNLTAHVGDFGLAR 808
PSN+ ++ + + DFGLAR
Sbjct: 165 PSNLAVNEDCELKILDFGLAR 185
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 34/201 (16%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GS + R+ L K +E + + + +G G++GSV + G VA+K
Sbjct: 11 GSMSQERPTFYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 66
Query: 676 LNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLE 733
L+ Q +K E R L++++H N++ L+ + P SLE
Sbjct: 67 LSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLE 109
Query: 734 NWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLK 787
+ D T ++ N+ ++++ + + + Y+H IH DLK
Sbjct: 110 EF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLK 164
Query: 788 PSNILLDNNLTAHVGDFGLAR 808
PSN+ ++ + + DFGLAR
Sbjct: 165 PSNLAVNEDCELKILDFGLAR 185
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 34/201 (16%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GS + R+ L K +E + + + +G G++GSV + G VA+K
Sbjct: 1 GSMSQERPTFYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 56
Query: 676 LNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLE 733
L+ Q +K E R L++++H N++ L+ + P SLE
Sbjct: 57 LSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLE 99
Query: 734 NWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLK 787
+ D T ++ N+ ++++ + + + Y+H IH DLK
Sbjct: 100 EF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLK 154
Query: 788 PSNILLDNNLTAHVGDFGLAR 808
PSN+ ++ + + DFGLAR
Sbjct: 155 PSNLAVNEDCELKILDFGLAR 175
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 23/188 (12%)
Query: 651 IGIGSFGSVYKGT---FDRDG----TIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D T VA+K+L S +E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTD-----EENDEIRNLTL 756
++ ++ +C+ Q +V +Y G+L +L P + N E L+
Sbjct: 96 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSHNPE-EQLSS 149
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNN 816
+ +S A VA ++YL + IH DL N+L+ + + DFGLAR +
Sbjct: 150 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXX 206
Query: 817 QSSSVGDL 824
+ ++ G L
Sbjct: 207 KKTTNGRL 214
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 34/173 (19%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D F +G G+ G V+K + G ++A K+++L+++ A+RN R L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL 74
Query: 703 VRVITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDA-IPQTDEENDEIRNL 754
+V+ C+S + F G + ++ ++M GSL+ L IP+
Sbjct: 75 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----------- 122
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+L ++SIA V + YL + +H D+KPSNIL+++ + DFG++
Sbjct: 123 QILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 36/202 (17%)
Query: 615 GGSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIK 674
G S + P+ R+ L K +E + + + +G G++GSV + G VA+K
Sbjct: 11 GMSQERPT--FYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK 64
Query: 675 VLNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL 732
L+ Q +K E R L++++H N++ L+ + P SL
Sbjct: 65 KLSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSL 107
Query: 733 ENWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDL 786
E + D T ++ N+ ++++ + + + Y+H IH DL
Sbjct: 108 EEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDL 162
Query: 787 KPSNILLDNNLTAHVGDFGLAR 808
KPSN+ ++ + + DFGLAR
Sbjct: 163 KPSNLAVNEDCELKILDFGLAR 184
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 319 VSGSIPSEIGKLVSLYLIEMDHNQFE-GKIPEE--MSRLQNLQFLNMRHNQLSGEIPSSF 375
+G EI + + L+ E+ N E G+I + RL +L L ++ NQL+G P++F
Sbjct: 15 CTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAF 74
Query: 376 GNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLNF 435
S + +L LG N + + L QL L+L+ N +S +P +++ ++ SLN
Sbjct: 75 EGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT-SLNL 133
Query: 436 ARN 438
A N
Sbjct: 134 ASN 136
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
Query: 60 EIHLSNNTIQGKI--PGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLE 117
E+ L++N + G+I G GRL L L L N L G P S + L LG NK++
Sbjct: 33 ELLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK 91
Query: 118 GSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNI 168
F+ L+ LK L + +N ++ +P ++ SL +++LA N N
Sbjct: 92 EISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 448 IGNLKVLRMFVVSSNNLSGEIPSEIGSCFYLQEIYMAENFFRGSIPSSLVSLKDLREIDL 507
G L L + N L+G P+ ++QE+ + EN + + L L+ ++L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 508 SQNNLSGKIPISLERL-PLEYLNLSFN 533
N +S +P S E L L LNL+ N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 303 LNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNM 362
L L NQ G P++ S E+ +L + E+ + F G L L+ LN+
Sbjct: 59 LELKRNQLTGIEPNAFEGASHIQEL-QLGENKIKEISNKMFLG--------LHQLKTLNL 109
Query: 363 RHNQLSGEIPSSFGNLSSLVKLILGNN 389
NQ+S +P SF +L+SL L L +N
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 36/202 (17%)
Query: 615 GGSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIK 674
G S + P+ R+ L K +E + + + +G G++GSV + G VA+K
Sbjct: 11 GMSQERPT--FYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVK 64
Query: 675 VLNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL 732
L+ Q +K E R L++++H N++ L+ + P SL
Sbjct: 65 KLSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSL 107
Query: 733 ENWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDL 786
E + D T ++ N+ ++++ + + + Y+H IH DL
Sbjct: 108 EEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDL 162
Query: 787 KPSNILLDNNLTAHVGDFGLAR 808
KPSN+ ++ + + DFGLAR
Sbjct: 163 KPSNLAVNEDXELKILDFGLAR 184
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 33/166 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR-------HRNLV 703
+G G++G V+K R G +VA+K + Q ++ + R R I H N+V
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDA----QRTFREIMILTELSGHENIV 72
Query: 704 RVITSCSSIDFQGNDFKA-LVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
++ + ND LV+ YM E LH A+ + + L + + +
Sbjct: 73 NLLNVLRA----DNDRDVYLVFDYM-----ETDLH--AVIRANI-------LEPVHKQYV 114
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YLH +H D+KPSNILL+ V DFGL+R
Sbjct: 115 VYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 34/201 (16%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GS + R+ L K +E + + + +G G++GSV + G VA+K
Sbjct: 11 GSMSQERPTFYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 66
Query: 676 LNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLE 733
L+ Q +K E R L++++H N++ L+ + P SLE
Sbjct: 67 LSKPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLE 109
Query: 734 NWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLK 787
+ D T ++ N+ ++++ + + + Y+H IH DLK
Sbjct: 110 EF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLK 164
Query: 788 PSNILLDNNLTAHVGDFGLAR 808
PSN+ ++ + + DFGLAR
Sbjct: 165 PSNLAVNEDCELKILDFGLAR 185
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 651 IGIGSFGSVYKGT---FDRDGT--IVAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 91
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRNLTLL 757
N+V ++ +C+ G +V ++ G+L +L + +P D D LTL
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKD---FLTLE 144
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 145 HLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 24/172 (13%)
Query: 651 IGIGSFGSVYKGT---FDRDGTI--VAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 93
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRN-LTL 756
N+V ++ +C+ G +V ++ G+L +L + +P + D ++ LTL
Sbjct: 94 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTL 149
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 150 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 30/174 (17%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQL--QGASKSFAAECRALRNIRHR 700
D + +G G++G VYK VAIK + L+ +G + E L+ ++HR
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHR 93
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
N++ + + N L+++Y N L+ ++ D+ ++++
Sbjct: 94 NIIELKSV-----IHHNHRLHLIFEYAEN-DLKKYM------------DKNPDVSMRVIK 135
Query: 761 SIAIDVASAVDYLH-HHCQEPTIHCDLKPSNILL---DNNLTA--HVGDFGLAR 808
S + + V++ H C +H DLKP N+LL D + T +GDFGLAR
Sbjct: 136 SFLYQLINGVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 69/172 (40%), Gaps = 18/172 (10%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQG--ASKSFAAECRALRN 696
+K D + HLIG GS+G VY VAIK +N + K E L
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
++ ++R+ D D +V + + + L+ + NL L
Sbjct: 84 LKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLL 142
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
E+ ++H + IH DLKP+N LL+ + + + DFGLAR
Sbjct: 143 GEK------------FIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 34/173 (19%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D F +G G+ G V+K + G ++A K+++L+++ A+RN R L
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL 82
Query: 703 VRVITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDA-IPQTDEENDEIRNL 754
+V+ C+S + F G + ++ ++M GSL+ L IP+
Sbjct: 83 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----------- 130
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+L ++SIA V + YL + +H D+KPSNIL+++ + DFG++
Sbjct: 131 QILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 35/183 (19%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D F +G G+ G V+K + G ++A K+++L+++ A+RN R L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL 58
Query: 703 VRVITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDA-IPQTDEENDEIRNL 754
+V+ C+S + F G + ++ ++M GSL+ L IP+
Sbjct: 59 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----------- 106
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA-RLRQEV 813
+L ++SIA V + YL + +H D+KPSNIL+++ + DFG++ +L E+
Sbjct: 107 QILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEM 162
Query: 814 PNN 816
N
Sbjct: 163 ANE 165
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F IG GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 68/163 (41%), Gaps = 29/163 (17%)
Query: 651 IGIGSFGSVYKGTF-DRDGTIVAIKVLNLQLQGA--SKSFAAECRALRNIRHRNLVRVIT 707
IG G FG V+ G + ++D VAIK + +GA + F E + + H LV++
Sbjct: 16 IGSGQFGLVHLGYWLNKDK--VAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI-SIAIDV 766
C LV ++M +G L ++L R L E + + +DV
Sbjct: 71 VCLE-----QAPICLVTEFMEHGCLSDYLRTQ------------RGLFAAETLLGMCLDV 113
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ YL C IH DL N L+ N V DFG+ R
Sbjct: 114 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRF 153
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 34/173 (19%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D F +G G+ G V+K + G ++A K+++L+++ A+RN R L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL 55
Query: 703 VRVITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDA-IPQTDEENDEIRNL 754
+V+ C+S + F G + ++ ++M GSL+ L IP+
Sbjct: 56 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----------- 103
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+L ++SIA V + YL + +H D+KPSNIL+++ + DFG++
Sbjct: 104 QILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 34/173 (19%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D F +G G+ G V+K + G ++A K+++L+++ A+RN R L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL 55
Query: 703 VRVITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDA-IPQTDEENDEIRNL 754
+V+ C+S + F G + ++ ++M GSL+ L IP+
Sbjct: 56 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----------- 103
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+L ++SIA V + YL + +H D+KPSNIL+++ + DFG++
Sbjct: 104 QILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 651 IGIGSFGSVYKGT---FDRDG----TIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D T VA+K+L S +E ++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTD-----EENDEIRNLTL 756
++ ++ +C+ Q +V +Y G+L +L P + N E L+
Sbjct: 96 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPE-EQLSS 149
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S A VA ++YL + IH DL N+L+ + + DFGLAR
Sbjct: 150 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 34/173 (19%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D F +G G+ G V+K + G ++A K+++L+++ A+RN R L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL 55
Query: 703 VRVITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDA-IPQTDEENDEIRNL 754
+V+ C+S + F G + ++ ++M GSL+ L IP+
Sbjct: 56 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----------- 103
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+L ++SIA V + YL + +H D+KPSNIL+++ + DFG++
Sbjct: 104 QILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 94 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------- 138
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 139 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 40/181 (22%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + F E + L+
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKA------LVYQYMPNGSLENWLHPDAIPQTDEEND 749
+ H + + + ++G + LV +Y+P+G L ++L Q
Sbjct: 64 AL-HSDFI--------VKYRGVSYGPGRPELRLVMEYLPSGCLRDFL------QRHRARL 108
Query: 750 EIRNLTLLERISIAIDVASAVDYL-HHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ L L + + ++YL C +H DL NIL+++ + DFGLA+
Sbjct: 109 DASRLLL-----YSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAK 159
Query: 809 L 809
L
Sbjct: 160 L 160
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 34/173 (19%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D F +G G+ G V+K + G ++A K+++L+++ A+RN R L
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL 117
Query: 703 VRVITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDA-IPQTDEENDEIRNL 754
+V+ C+S + F G + ++ ++M GSL+ L IP+
Sbjct: 118 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----------- 165
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+L ++SIA V + YL + +H D+KPSNIL+++ + DFG++
Sbjct: 166 QILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 30/176 (17%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + F E + L+
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 66
Query: 696 NIRHRNLVRVITSCSSIDF-QGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ +V+ + + G LV +Y+P+G L ++L Q + L
Sbjct: 67 ALHSDFIVKY----RGVSYGPGRQSLRLVMEYLPSGCLRDFL------QRHRARLDASRL 116
Query: 755 TLLERISIAIDVASAVDYL-HHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
L + + ++YL C +H DL NIL+++ + DFGLA+L
Sbjct: 117 LL-----YSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKL 163
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 30/170 (17%)
Query: 646 SSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--SKSFAAECRALRNIRHRN-- 701
S TH +G G++GSV R G VAIK L+ Q +K E L++++H N
Sbjct: 28 SPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVI 86
Query: 702 -LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL-LER 759
L+ V T SS+ DF Y MP QTD + +I L E+
Sbjct: 87 GLLDVFTPASSLR-NFYDF----YLVMP------------FMQTDLQ--KIMGLKFSEEK 127
Query: 760 IS-IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + + + Y+H +H DLKP N+ ++ + + DFGLAR
Sbjct: 128 IQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 28/175 (16%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + F E + L+
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 696 NIRHRNLVRVITSCSSIDF-QGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ +V+ + + G LV +Y+P+G L ++L Q + L
Sbjct: 68 ALHSDFIVKY----RGVSYGPGRQSLRLVMEYLPSGCLRDFL------QRHRARLDASRL 117
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
L + + ++YL +H DL NIL+++ + DFGLA+L
Sbjct: 118 LL-----YSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKL 164
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ S F+ N +V +Y+P G E + H I + E +
Sbjct: 101 PFLVKLEYS-----FKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 651 IGIGSFGSVYKGT---FDRDGT--IVAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 91
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRNLTLL 757
N+V ++ +C+ G +V ++ G+L +L + +P D D LTL
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKD---FLTLE 144
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 145 HLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 651 IGIGSFGSVYKGT---FDRDG----TIVAIKVLNLQLQGASKS-FAAECRALRNI-RHRN 701
+G G+FG V D+D T VA+K+L S +E ++ I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTD-----EENDEIRNLTL 756
++ ++ +C+ Q +V +Y G+L +L P + N E L+
Sbjct: 81 IINLLGACT----QDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPE-EQLSS 134
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +S A VA ++YL + IH DL N+L+ + + DFGLAR
Sbjct: 135 KDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------- 146
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 147 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQ-LQGASKSFAAECRALRNIRHRN 701
D + +IG G+ V VAIK +NL+ Q + E +A+ H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+V TS F D LV + + GS+ + + + + + ++ + T+ +
Sbjct: 75 IVSYYTS-----FVVKDELWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDESTI---AT 125
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
I +V ++YLH + Q IH D+K NILL + + + DFG++
Sbjct: 126 ILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 34/173 (19%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D F +G G+ G V+K + G ++A K+++L+++ A+RN R L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL 55
Query: 703 VRVITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDA-IPQTDEENDEIRNL 754
+V+ C+S + F G + ++ ++M GSL+ L IP+
Sbjct: 56 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----------- 103
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+L ++SIA V + YL + +H D+KPSNIL+++ + DFG++
Sbjct: 104 QILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 19/170 (11%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK---SFAAECRALRNIR 698
+D + ++G G V+ RD VA+KVL L F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H +V V + + + +V +Y+ +L + +H + +T
Sbjct: 71 HPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEG------------PMTPKR 117
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + D A+++ H Q IH D+KP+NIL+ V DFG+AR
Sbjct: 118 AIEVIADACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIAR 164
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 94 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFXEPHARF-------- 138
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 139 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 33 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 88
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 89 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 129
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 130 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 186
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 187 LKILDFGLAR 196
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + IG G++GSV + G VA+K L+ Q +
Sbjct: 15 RQELNKTIWE----VPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 71 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 111
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 112 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXE 168
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 169 LKILDFGLAR 178
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 28/175 (16%)
Query: 645 FSSTHL-----IGIGSFGSV----YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALR 695
F HL +G G+FGSV Y D G +VA+K L + F E + L+
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 79
Query: 696 NIRHRNLVRVITSCSSIDF-QGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
+ +V+ + + G LV +Y+P+G L ++L Q + L
Sbjct: 80 ALHSDFIVKY----RGVSYGPGRQSLRLVMEYLPSGCLRDFL------QRHRARLDASRL 129
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
L + + ++YL +H DL NIL+++ + DFGLA+L
Sbjct: 130 LL-----YSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKL 176
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 70/167 (41%), Gaps = 32/167 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
IG G +G V+ G + G VA+KV + AS E +RH N++ I +
Sbjct: 45 IGKGRYGEVWMGKWR--GEKVAVKVF-FTTEEASWFRETEIYQTVLMRHENILGFIAA-- 99
Query: 711 SIDFQGNDFKALVY---QYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
D +G +Y Y NGSL ++L ++ TL + + + +
Sbjct: 100 --DIKGTGSWTQLYLITDYHENGSLYDYL---------------KSTTLDAKSMLKLAYS 142
Query: 768 SAVDYLHHHCQ------EPTI-HCDLKPSNILLDNNLTAHVGDFGLA 807
S H H + +P I H DLK NIL+ N T + D GLA
Sbjct: 143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ S F+ N +V +Y+P G E + H I + E +
Sbjct: 101 PFLVKLEYS-----FKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 34/201 (16%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GS + R+ L K +E + + + +G G++GSV + G VA+K
Sbjct: 1 GSMSQERPTFYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 56
Query: 676 LNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLE 733
L+ Q +K E R L++++H N++ L+ + P SLE
Sbjct: 57 LSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLE 99
Query: 734 NWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLK 787
+ D T ++ N+ ++++ + + + Y+H IH DLK
Sbjct: 100 EF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLK 154
Query: 788 PSNILLDNNLTAHVGDFGLAR 808
PSN+ ++ + + DFGLAR
Sbjct: 155 PSNLAVNEDSELKILDFGLAR 175
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 34/173 (19%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D F +G G+ G V+K + G ++A K+++L+++ A+RN R L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----------PAIRNQIIREL 55
Query: 703 VRVITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWLHPDA-IPQTDEENDEIRNL 754
+V+ C+S + F G + ++ ++M GSL+ L IP+
Sbjct: 56 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----------- 103
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+L ++SIA V + YL + +H D+KPSNIL+++ + DFG++
Sbjct: 104 QILGKVSIA--VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 36/199 (18%)
Query: 618 GKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN 677
G P+ R+ L K +E + + + +G G++GSV + G VA+K L+
Sbjct: 1 GSRPT--FYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS 54
Query: 678 LQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENW 735
Q +K E R L++++H N++ L+ + P SLE +
Sbjct: 55 RPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF 97
Query: 736 LHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPS 789
D T ++ N+ ++++ + + + Y+H IH DLKPS
Sbjct: 98 --NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPS 152
Query: 790 NILLDNNLTAHVGDFGLAR 808
N+ ++ + + DFGLAR
Sbjct: 153 NLAVNEDCELKILDFGLAR 171
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 36/201 (17%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
S + P+ R+ L K +E + + + +G G++GSV + G VA+K
Sbjct: 24 ASQERPT--FYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 77
Query: 676 LNLQLQGA--SKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLE 733
L+ Q +K E R L++++H N++ L+ + P SLE
Sbjct: 78 LSRPFQSIIHAKRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLE 120
Query: 734 NWLHPDAIPQTDEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLK 787
+ D T ++ N+ ++++ + + + Y+H IH DLK
Sbjct: 121 EF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLK 175
Query: 788 PSNILLDNNLTAHVGDFGLAR 808
PSN+ ++ + + DFGLAR
Sbjct: 176 PSNLAVNEDCELKILDFGLAR 196
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 651 IGIGSFGSVYKGT---FDRDGTI--VAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 92
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRNLTLL 757
N+V ++ +C+ G +V ++ G+L +L + +P E+ LTL
Sbjct: 93 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLE 148
Query: 758 ERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 149 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ S F+ N +V +Y+P G E + H I + E +
Sbjct: 101 PFLVKLEYS-----FKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 82/189 (43%), Gaps = 32/189 (16%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ + K ++E ++A + +G G++G+V R G VAIK L Q +
Sbjct: 13 RQEVTKTAWE--VRAV--YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFA 68
Query: 685 KSFAAECRALRNIRHRN---LVRVITSCSSIDFQGNDFKALVYQYMP--NGSLENWLHPD 739
K E R L+++RH N L+ V T ++D DF Y MP L + +
Sbjct: 69 KRAYRELRLLKHMRHENVIGLLDVFTPDETLD----DFTDF-YLVMPFMGTDLGKLMKHE 123
Query: 740 AIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA 799
+ + D I+ L + + Y+H IH DLKP N+ ++ +
Sbjct: 124 KLGE-----DRIQFLVY--------QMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCEL 167
Query: 800 HVGDFGLAR 808
+ DFGLAR
Sbjct: 168 KILDFGLAR 176
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRN 696
+KA D + +IG G+FG V + A+K+L+ ++ + +F E R +
Sbjct: 71 MKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
+ V + FQ + + +V +YMP G L N + +P+
Sbjct: 130 FANSPWVVQLFYA----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------------ 173
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
R A +V A+D +H IH D+KP N+LLD + + DFG
Sbjct: 174 WARFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQ-LQGASKSFAAECRALRNIRHRN 701
D + +IG G+ V VAIK +NL+ Q + E +A+ H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+V TS F D LV + + GS+ + + + + + ++ + T+ +
Sbjct: 70 IVSYYTS-----FVVKDELWLVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDESTI---AT 120
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
I +V ++YLH + Q IH D+K NILL + + + DFG++
Sbjct: 121 ILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGA-SKSFAAECRALRNIRHRNLVR 704
+G FG VYKG VAIK L + +G + F E ++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWL-----HPDAIPQTDEENDEIRNLTLLER 759
++ + + ++++ Y +G L +L H D + TD++ L +
Sbjct: 94 LLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSD-VGSTDDDRTVKSALEPPDF 147
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + +A+ ++YL H +H DL N+L+ + L + D GL R
Sbjct: 148 VHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR 193
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRN 696
+KA D + +IG G+FG V + A+K+L+ ++ + +F E R +
Sbjct: 66 MKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 124
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
+ V + FQ + + +V +YMP G L N + +P+
Sbjct: 125 FANSPWVVQLFYA----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------------ 168
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
R A +V A+D +H IH D+KP N+LLD + + DFG
Sbjct: 169 WARFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG 213
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 16 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 72 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 112
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 113 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 169
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 170 LKILDFGLAR 179
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 20/165 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
+ F +IG G+FG V I A+K+LN + + ++ A R R++
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-KWEMLKRAETACFREERDVLVNGD 132
Query: 703 VRVITSCSSIDFQGNDFKALVYQYMPNGSLENWL--HPDAIPQTDEENDEIRNLTLLERI 760
+ IT+ FQ + LV Y G L L D +P+ + R
Sbjct: 133 CQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED------------MARF 179
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
I ++ A+D +H Q +H D+KP N+LLD N + DFG
Sbjct: 180 YIG-EMVLAIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFG 220
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 651 IGIGSFGSVYKGTF-----DRDGTIVAIKVLNLQLQGA-SKSFAAECRALRNIRHRNLVR 704
+G FG VYKG VAIK L + +G + F E ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWL-----HPDAIPQTDEENDEIRNLTLLER 759
++ + + ++++ Y +G L +L H D + TD++ L +
Sbjct: 77 LLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSD-VGSTDDDRTVKSALEPPDF 130
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + +A+ ++YL H +H DL N+L+ + L + D GL R
Sbjct: 131 VHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR 176
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 20/165 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
+ F +IG G+FG V I A+K+LN + + ++ A R R++
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-KWEMLKRAETACFREERDVLVNGD 148
Query: 703 VRVITSCSSIDFQGNDFKALVYQYMPNGSLENWL--HPDAIPQTDEENDEIRNLTLLERI 760
+ IT+ FQ + LV Y G L L D +P+ + R
Sbjct: 149 CQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPED------------MARF 195
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
I ++ A+D +H Q +H D+KP N+LLD N + DFG
Sbjct: 196 YIG-EMVLAIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFG 236
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Query: 651 IGIGSFGSVYKGTF----DRDGTI-VAIKVLNLQLQGASK-SFAAECRALRNI-RHRNLV 703
+G G+FG V + T D + VA+K+L K + +E + + ++ +H N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN----LTLLER 759
++ +C+ G ++ +Y G L N+L P + + N L+ +
Sbjct: 114 NLLGACT----HGGPV-LVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + VA + +L + IH D+ N+LL N A +GDFGLAR
Sbjct: 169 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 76
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 127
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 128 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 80
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 131
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 132 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 175
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRN 696
+KA D + +IG G+FG V + A+K+L+ ++ + +F E R +
Sbjct: 71 MKAED-YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
+ V + FQ + + +V +YMP G L N + +P+
Sbjct: 130 FANSPWVVQLFYA----FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------------ 173
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
R A +V A+D +H IH D+KP N+LLD + + DFG
Sbjct: 174 WARFYTA-EVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 164 LKILDFGLAR 173
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 12 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 67
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 68 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 108
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 109 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 165
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 166 LKILDFGLAR 175
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 164 LKILDFGLAR 173
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 77
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 128
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 129 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 172
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRN---LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAI 741
K E R L++++H N L+ V T S++ + ND + ++ L N + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLE-EFND--VYLVTHLMGADLNNIVKXQKL 122
Query: 742 PQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHV 801
+D ++ L + + Y+H IH DLKPSN+ ++ + +
Sbjct: 123 -----TDDHVQFLIY--------QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKI 166
Query: 802 GDFGLAR 808
DFGLAR
Sbjct: 167 LDFGLAR 173
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 17 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 73 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 113
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 114 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 170
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 171 LKILDFGLAR 180
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 76
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 127
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 128 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 15 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 71 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 111
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 112 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 168
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 169 LKILDFGLAR 178
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRN---LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAI 741
K E R L++++H N L+ V T S++ + ND + ++ L N + +
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLE-EFND--VYLVTHLMGADLNNIVKXQKL 122
Query: 742 PQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHV 801
+D ++ L + + Y+H IH DLKPSN+ ++ + +
Sbjct: 123 -----TDDHVQFLIY--------QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 166
Query: 802 GDFGLAR 808
DFGLAR
Sbjct: 167 LDFGLAR 173
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 164 LKILDFGLAR 173
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 17 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 73 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 113
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 114 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 170
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 171 LKILDFGLAR 180
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 76
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 127
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 128 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 26/168 (15%)
Query: 646 SSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--SKSFAAECRALRNIRHRN-- 701
S TH +G G++GSV R G VAIK L+ Q +K E L++++H N
Sbjct: 46 SPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVI 104
Query: 702 -LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
L+ V T SS+ DF Y MP QTD + + +
Sbjct: 105 GLLDVFTPASSLR-NFYDF----YLVMP------------FMQTDLQKIMGMEFSEEKIQ 147
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + Y+H +H DLKP N+ ++ + + DFGLAR
Sbjct: 148 YLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 88
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 139
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 140 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 19/170 (11%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK---SFAAECRALRNIR 698
+D + ++G G V+ RD VA+KVL L F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H +V V + + + +V +Y+ +L + +H + +T
Sbjct: 71 HPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEG------------PMTPKR 117
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + D A+++ H Q IH D+KP+NI++ V DFG+AR
Sbjct: 118 AIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIAR 164
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI--RHRNLVRVITS 708
+G G +G V++G++ G VA+K+ + + + KS+ E + RH N++ I S
Sbjct: 45 VGKGRYGEVWRGSWQ--GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIAS 99
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS---IAID 765
+ L+ Y GSL ++L LT L+ +S I +
Sbjct: 100 DMTSRHSSTQL-WLITHYHEMGSLYDYLQ----------------LTTLDTVSCLRIVLS 142
Query: 766 VASAVDYLHHHC----QEPTI-HCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNN 816
+AS + +LH +P I H DLK NIL+ N + D GLA + + N
Sbjct: 143 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 198
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 651 IGIGSFGSVYKGT---FDRDGTI--VAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 128
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRN-LTL 756
N+V ++ +C+ G +V ++ G+L +L + +P D ++ LTL
Sbjct: 129 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 184
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 185 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 164 LKILDFGLAR 173
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 29/163 (17%)
Query: 651 IGIGSFGSVYKGTF-DRDGTIVAIKVLNLQLQGA--SKSFAAECRALRNIRHRNLVRVIT 707
IG G FG V+ G + ++D VAIK + +GA + F E + + H LV++
Sbjct: 15 IGSGQFGLVHLGYWLNKDK--VAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI-SIAIDV 766
C LV+++M +G L ++L R L E + + +DV
Sbjct: 70 VCLE-----QAPICLVFEFMEHGCLSDYLRTQ------------RGLFAAETLLGMCLDV 112
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ YL + IH DL N L+ N V DFG+ R
Sbjct: 113 CEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 17 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 73 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 113
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 114 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 170
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 171 LKILDFGLAR 180
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 70/173 (40%), Gaps = 36/173 (20%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHRNL 702
+ IG G++G+V+K IVA+K + L +G S E L+ ++H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 703 VRVITSCSS-------IDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
VR+ S +F D K Y NG L+ P+ +
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKK--YFDSCNGDLD----PEIVK------------- 104
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H +H DLKP N+L++ N + DFGLAR
Sbjct: 105 -----SFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 6 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 61
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 62 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 102
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 103 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 159
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 160 LKILDFGLAR 169
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 89
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 140
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 141 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 184
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 164 LKILDFGLAR 173
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 7 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 63 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 103
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 104 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 160
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 161 LKILDFGLAR 170
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 7 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 62
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 63 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 103
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 104 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 160
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 161 LKILDFGLAR 170
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 301 SFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFL 360
++L+L N K +LP+ + E+ L LYL N+ + ++L +L +L
Sbjct: 31 TYLDLETNSLK-SLPNGVFD-----ELTSLTQLYL---GGNKLQSLPNGVFNKLTSLTYL 81
Query: 361 NMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP 420
N+ NQL F L+ L +L L N L + L QL L L+QN L ++P
Sbjct: 82 NLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVP 140
Query: 421 EEIFN 425
+ +F+
Sbjct: 141 DGVFD 145
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 57/137 (41%)
Query: 33 RVTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSL 92
+ T LDL++ L + L+ L +++L N +Q G +L L L LS N L
Sbjct: 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQL 88
Query: 93 VGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNIT 152
G ++L L L N+L+ F L LK+L + +N L +T
Sbjct: 89 QSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLT 148
Query: 153 SLEAISLAYNSLGGNIP 169
SL+ I L N P
Sbjct: 149 SLQYIWLHDNPWDCTCP 165
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 30/196 (15%)
Query: 258 GKLSVNFGDMKSLAYLNVAINNLGS---GESDEMSFIHSLANCSNLSFLNLVANQFKGAL 314
G+ SV G YL++ N+L S G DE++ +L+ L L N+ + +L
Sbjct: 18 GRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELT---------SLTQLYLGGNKLQ-SL 67
Query: 315 PHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSS 374
P+ + KL SL + + NQ + +L L+ L + NQL
Sbjct: 68 PNGV--------FNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGV 119
Query: 375 FGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLN 434
F L+ L L L N L V L L + L N P I ++S+ +N
Sbjct: 120 FDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLSEWIN 175
Query: 435 ----FARNHLVGSIPP 446
RN GS+ P
Sbjct: 176 KHSGVVRNS-AGSVAP 190
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 28/167 (16%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGS---GESDEMSFIHSLA 295
F ++L L + GN + F + SL YLN++ N L S G D+++ + LA
Sbjct: 47 VFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106
Query: 296 NCSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQ 355
L NQ + +LP + KL L + + NQ + RL
Sbjct: 107 ---------LNTNQLQ-SLPDGV--------FDKLTQLKDLRLYQNQLKSVPDGVFDRLT 148
Query: 356 NLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNL 402
+LQ++ + N P + L + I N SGV+ +S G++
Sbjct: 149 SLQYIWLHDNPWDCTCP----GIRYLSEWI---NKHSGVVRNSAGSV 188
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
Query: 69 QGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLY 128
QG+ G + L L NSL G + L LYLG NKL+ F L
Sbjct: 17 QGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLT 76
Query: 129 NLKELAIQENNLTGGIPHFLGNITSLEAISLAYN---SLGGNIPSSLGQLKELK 179
+L L + N L +T L+ ++L N SL + L QLK+L+
Sbjct: 77 SLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 15 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 71 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 111
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 112 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 168
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 169 LKILDFGLAR 178
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 88
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 139
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 140 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 9 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 64
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 65 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 105
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 106 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 162
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 163 LKILDFGLAR 172
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRALRKV--SYESLLKAT---DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A +ES + T D F +G GSFG V G
Sbjct: 8 KKGSEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETG 67
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 122
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y P G E + H I + E + A + +YLH I+ D
Sbjct: 123 YAPGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLH---SLDLIYRD 167
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+++D V DFG A+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAK 190
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 164 LKILDFGLAR 173
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 95
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 146
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 147 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 190
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 164 LKILDFGLAR 173
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 19/170 (11%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK---SFAAECRALRNIR 698
+D + ++G G V+ RD VA+KVL L F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H +V V + + + +V +Y+ +L + +H + +T
Sbjct: 71 HPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEG------------PMTPKR 117
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + D A+++ H Q IH D+KP+NI++ V DFG+AR
Sbjct: 118 AIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIAR 164
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 15 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 70
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 71 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 111
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 112 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXE 168
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 169 LKILDFGLAR 178
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 164 LKILDFGLAR 173
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 17 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 72
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 73 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 113
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 114 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 170
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 171 LKILDFGLAR 180
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 6 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 62 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 102
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 103 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 159
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 160 LKILDFGLAR 169
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 164 LKILDFGLAR 173
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 164 LKILDFGLAR 173
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL--NLQLQGAS-KSFAAECRALRNIRH 699
D F ++G GSFG V G + A+KVL ++ LQ + E R L R+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
+ + C FQ D V +++ G L + Q DE R
Sbjct: 83 HPFLTQLFCC----FQTPDRLFFVMEFVNGGDLMFHI------QKSRRFDEARARFY--- 129
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A ++ SA+ +LH + I+ DLK N+LLD+ + DFG+ +
Sbjct: 130 ---AAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI-- 697
+ T F IG G FGSV+K DG I AIK L G+ E ALR +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS----VDEQNALREVYA 63
Query: 698 -----RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR 752
+H ++VR ++ + +D + +Y GSL + + + + + E++
Sbjct: 64 HAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 118
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILL 793
+L L V + Y+H +H D+KPSNI +
Sbjct: 119 DLLL--------QVGRGLRYIH---SMSLVHMDIKPSNIFI 148
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 84
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 135
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 136 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 179
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 164 LKILDFGLAR 173
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 6 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 61
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 62 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 102
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 103 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 159
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 160 LKILDFGLAR 169
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI-- 697
+ T F IG G FGSV+K DG I AIK L G+ E ALR +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS----VDEQNALREVYA 59
Query: 698 -----RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR 752
+H ++VR ++ + +D + +Y GSL + + + + + E++
Sbjct: 60 HAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 114
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILL 793
+L L V + Y+H +H D+KPSNI +
Sbjct: 115 DLLL--------QVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 81
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 132
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 133 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 176
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 30/166 (18%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--SKSFAAECRALRNIRHRNLVRVITS 708
+G G++GSV + G VA+K L+ Q +K E R L++++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 90
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS------I 762
L+ + P SLE + D T ++ N+ ++++ +
Sbjct: 91 ------------GLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + Y+H IH DLKPSN+ ++ + + DFGLAR
Sbjct: 137 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 32/176 (18%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI--RHRNLVRVITS 708
+G G +G V++G++ G VA+K+ + + KS+ E + RH N++ I S
Sbjct: 16 VGKGRYGEVWRGSWQ--GENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS---IAID 765
+ L+ Y GSL ++L LT L+ +S I +
Sbjct: 71 DMTSRHSSTQL-WLITHYHEMGSLYDYLQ----------------LTTLDTVSCLRIVLS 113
Query: 766 VASAVDYLHHHC----QEPTI-HCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNN 816
+AS + +LH +P I H DLK NIL+ N + D GLA + + N
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 112
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 163
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 164 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 155
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 206
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 207 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 250
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 114
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 165
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 166 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 32/176 (18%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI--RHRNLVRVITS 708
+G G +G V++G++ G VA+K+ + + KS+ E + RH N++ I S
Sbjct: 16 VGKGRYGEVWRGSWQ--GENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS---IAID 765
+ L+ Y GSL ++L LT L+ +S I +
Sbjct: 71 DMTSRHSSTQL-WLITHYHEMGSLYDYLQ----------------LTTLDTVSCLRIVLS 113
Query: 766 VASAVDYLHHHC----QEPTI-HCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNN 816
+AS + +LH +P I H DLK NIL+ N + D GLA + + N
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI-- 697
+ T F IG G FGSV+K DG I AIK L G+ E ALR +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS----VDEQNALREVYA 61
Query: 698 -----RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR 752
+H ++VR ++ + +D + +Y GSL + + + + + E++
Sbjct: 62 HAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 116
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILL 793
+L L V + Y+H +H D+KPSNI +
Sbjct: 117 DLLL--------QVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 136/370 (36%), Gaps = 64/370 (17%)
Query: 23 EGITCSPRHRRVTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRL 82
EGI R +LDL + + + L E+ L+ N + PG LF L
Sbjct: 28 EGIPTETR-----LLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 82
Query: 83 EALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTG 142
L L N L G + S L L + NK+ + F LYNLK L + +N+L
Sbjct: 83 RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY 142
Query: 143 GIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLANFSV 202
+ SLE ++L +L +L L L L L N++ + ++S
Sbjct: 143 ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRH------LNINAIRDYSF 196
Query: 203 PENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNFFGKLSV 262
++ +IS+ + + NL SL I N +V
Sbjct: 197 KR--------------LYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNL---TAV 239
Query: 263 NFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSIVSGS 322
+ ++ L YL FLNL N P S + GS
Sbjct: 240 PYLAVRHLVYLR---------------------------FLNLSYN------PISTIEGS 266
Query: 323 IPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLV 382
+ E+ +L + L+ Q P L L+ LN+ NQL+ S F ++ +L
Sbjct: 267 MLHELLRLQEIQLVG---GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLE 323
Query: 383 KLILGNNNLS 392
LIL +N L+
Sbjct: 324 TLILDSNPLA 333
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 132/361 (36%), Gaps = 90/361 (24%)
Query: 87 LSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPH 146
L H +P + +RL+ L G+N+++ EF S +L+EL + EN ++ P
Sbjct: 17 LCHRKRFVAVPEGIPTETRLLDL--GKNRIKTLNQDEFASFPHLEELELNENIVSAVEPG 74
Query: 147 FLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYN-LSLLANFSVPEN 205
N+ +L + L N L IP ++ LS L + EN
Sbjct: 75 AFNNLFNLRTLGLRSNRLK--------------------LIPLGVFTGLSNLTKLDISEN 114
Query: 206 RXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNLQSLEILGNNFFGKLSVNFG 265
+ F + NL+SLE+ N+ F
Sbjct: 115 KIVIL-------------------------LDYMFQDLYNLKSLEVGDNDLVYISHRAFS 149
Query: 266 DMKSLAYLNVAINNLGSGESDEMSFIHSLA--------------------------NCSN 299
+ SL L + NL S ++ +S +H L S+
Sbjct: 150 GLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISH 209
Query: 300 LSFLN-LVANQFKG------ALPHSIVSGSIPSEIGKLVSLYLIEMDHN---QFEGKIPE 349
+L+ + N G ++ H ++ + LV L + + +N EG +
Sbjct: 210 WPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLH 269
Query: 350 EMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPS---SLGNLKQLA 406
E+ RLQ +Q + QL+ P +F L+ L L + N L+ + S S+GNL+ L
Sbjct: 270 ELLRLQEIQLVG---GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLI 326
Query: 407 L 407
L
Sbjct: 327 L 327
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 90/232 (38%), Gaps = 26/232 (11%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCS 298
F+ SNL L+I N L F D+ +L L V N+L S ++SL +
Sbjct: 99 VFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLT 158
Query: 299 NLSFLNLVANQFKGALPHSIVSGSIPSE-IGKLVSLYLIEMDHNQFEGKIPEEMSRLQNL 357
L NL SIP+E + L L ++ + H RL L
Sbjct: 159 -LEKCNLT---------------SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRL 202
Query: 358 QFLNMRH-NQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLS 416
+ L + H L P+ L +L L + + NL+ V ++ +L L L+L N +S
Sbjct: 203 KVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS 261
Query: 417 ---GAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLS 465
G++ E+ + + L P L LR+ VS N L+
Sbjct: 262 TIEGSMLHELLRLQ----EIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 309
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 110
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 161
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 162 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 20 RQELNKTIWE----VPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 75
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 76 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 116
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 117 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 173
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 174 LKILDFGLAR 183
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI-- 697
+ T F IG G FGSV+K DG I AIK L G+ E ALR +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS----VDEQNALREVYA 61
Query: 698 -----RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR 752
+H ++VR ++ + +D + +Y GSL + + + + + E++
Sbjct: 62 HAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 116
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILL 793
+L L V + Y+H +H D+KPSNI +
Sbjct: 117 DLLL--------QVGRGLRYIH---SMSLVHMDIKPSNIFI 146
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 30/198 (15%)
Query: 616 GSGKEPSEPILRRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKV 675
GS + P+ R+ L K +E + + + +G G++GSV + G VA+K
Sbjct: 1 GSQERPT--FYRQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK 54
Query: 676 LNLQLQGA--SKSFAAECRALRNIRHRN---LVRVITSCSSIDFQGNDFKALVYQYMPNG 730
L+ Q +K E R L++++H N L+ V T S++ + ND + ++
Sbjct: 55 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE-EFND--VYLVTHLMGA 111
Query: 731 SLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSN 790
L N I ++ + D+ + + + + Y+H IH DLKPSN
Sbjct: 112 DLNN------IVKSQKLTDDHVQFLIYQ-------ILRGLKYIH---SADIIHRDLKPSN 155
Query: 791 ILLDNNLTAHVGDFGLAR 808
+ ++ + + DFGL R
Sbjct: 156 LAVNEDSELKILDFGLCR 173
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 20/164 (12%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVITS 708
++G G+ +V++G + G + AIKV N+ E L+ + H+N+V++
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
K L+ ++ P GSL L EE L E + + DV
Sbjct: 76 EEETT---TRHKVLIMEFCPCGSLYTVL---------EEPSNAYGLPESEFLIVLRDVVG 123
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILL----DNNLTAHVGDFGLAR 808
+++L + +H ++KP NI+ D + DFG AR
Sbjct: 124 GMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------- 146
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 147 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 30/166 (18%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--SKSFAAECRALRNIRHRNLVRVITS 708
+G G++GSV + G VA+K L+ Q +K E R L++++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI----- 90
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS------I 762
L+ + P SLE + D T ++ N+ ++++ +
Sbjct: 91 ------------GLLDVFTPARSLEEF--NDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 136
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + Y+H IH DLKPSN+ ++ + + DFGLAR
Sbjct: 137 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------- 146
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 147 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 110
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 161
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 162 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 1/148 (0%)
Query: 37 LDLKSKGLIGSLSP-QIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGE 95
LDL + S+ P L L +HL +Q PG L L+ LYL N+L
Sbjct: 85 LDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQAL 144
Query: 96 IPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLE 155
L L+L N++ F L++L L + +N + PH ++ L
Sbjct: 145 PDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLM 204
Query: 156 AISLAYNSLGGNIPSSLGQLKELKSLGL 183
+ L N+L +L L+ L+ L L
Sbjct: 205 TLYLFANNLSALPTEALAPLRALQYLRL 232
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 324 PSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVK 383
P L +L + + N + + L NL L + N++S +F L SL +
Sbjct: 122 PGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDR 181
Query: 384 LILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEE 422
L+L N ++ V P + +L +L L+LF N+LS A+P E
Sbjct: 182 LLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTE 219
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 1/148 (0%)
Query: 37 LDLKSKGLIGSLSP-QIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGE 95
LDL + S+ P L L +HL +Q PG L L+ LYL N+L
Sbjct: 84 LDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQAL 143
Query: 96 IPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLE 155
L L+L N++ F L++L L + +N + PH ++ L
Sbjct: 144 PDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLM 203
Query: 156 AISLAYNSLGGNIPSSLGQLKELKSLGL 183
+ L N+L +L L+ L+ L L
Sbjct: 204 TLYLFANNLSALPTEALAPLRALQYLRL 231
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 324 PSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVK 383
P L +L + + N + + L NL L + N++S +F L SL +
Sbjct: 121 PGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDR 180
Query: 384 LILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIPEE 422
L+L N ++ V P + +L +L L+LF N+LS A+P E
Sbjct: 181 LLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALPTE 218
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 104
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 155
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 156 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 199
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 20/164 (12%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVITS 708
++G G+ +V++G + G + AIKV N+ E L+ + H+N+V++
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ K L+ ++ P GSL L EE L E + + DV
Sbjct: 76 EEETTTR---HKVLIMEFCPCGSLYTVL---------EEPSNAYGLPESEFLIVLRDVVG 123
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILL----DNNLTAHVGDFGLAR 808
+++L + +H ++KP NI+ D + DFG AR
Sbjct: 124 GMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 651 IGIGSFGSVYKGT---FDRDGTI--VAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 82
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRN-LTL 756
N+V ++ +C+ G +V ++ G+L +L + +P D ++ LTL
Sbjct: 83 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 87 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------- 131
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 132 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 175
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 651 IGIGSFGSVYKGT---FDRDGTI--VAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 91
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRN-LTL 756
N+V ++ +C+ G +V ++ G+L +L + +P D ++ LTL
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 651 IGIGSFGSVYKGT---FDRDGTI--VAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 91
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRN-LTL 756
N+V ++ +C+ G +V ++ G+L +L + +P D ++ LTL
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y P G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+++D V DFGLA+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK 189
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 16 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 71
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 72 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 112
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 113 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSE 169
Query: 799 AHVGDFGLAR 808
+ DFGLAR
Sbjct: 170 LKILDFGLAR 179
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFXEPHARF-------- 146
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 147 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 651 IGIGSFGSVYKGT---FDRDGTI--VAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 91
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRN-LTL 756
N+V ++ +C+ G +V ++ G+L +L + +P D ++ LTL
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFXEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 24/169 (14%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLV 703
F +G G+F V G + A+K + L+G S E LR I+H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIA 763
+ I ++ + LV Q + G L + + + + IR
Sbjct: 84 ----ALEDI-YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ---------- 128
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNILL---DNNLTAHVGDFGLARL 809
V AV YLH + +H DLKP N+L D + DFGL+++
Sbjct: 129 --VLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM 172
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 20/169 (11%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQG--ASKSFAAECRALRNIRHR 700
D + HLIG GS+G VY VAIK +N + K E L ++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEI-RNLTLLER 759
++R+ D D +V + + + L+ L I T+E I NL L E
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKK-LFKTPIFLTEEHIKTILYNLLLGE- 142
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+++H + IH DLKP+N LL+ + + V DFGLAR
Sbjct: 143 -----------NFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+P G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGG--EMFSHLRRIGRFXEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G+FG VYK + A KV++ + + + + E L + H N+V+++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF- 103
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+ N+ L+ ++ G+++ + P T+ + + TL A+
Sbjct: 104 ---YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTL-----------DAL 148
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
+YLH + IH DLK NIL + + DFG++ + S +G
Sbjct: 149 NYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIG 197
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 23/170 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
F ++G G+F V+ G + A+K + S E L+ I+H N+V
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV- 69
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ I ++ LV Q + G L D I + ++ +L + +
Sbjct: 70 ---TLEDI-YESTTHYYLVMQLVSGGEL-----FDRILERGVYTEKDASLVIQQ------ 114
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILL---DNNLTAHVGDFGLARLRQ 811
V SAV YLH + +H DLKP N+L + N + DFGL+++ Q
Sbjct: 115 -VLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 25/175 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNL---QLQGASKSFAAECRALRNIRHRNLVRVIT 707
+G G +VY VAIK + + + + K F E + H+N+V +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI- 77
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
+D + +D LV +Y+ +L ++ D AI+
Sbjct: 78 ---DVD-EEDDCYYLVMEYIEGPTLSEYIESHGPLSVD----------------TAINFT 117
Query: 768 SAV-DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSV 821
+ + D + H +H D+KP NIL+D+N T + DFG+A+ E Q++ V
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHV 172
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQG---ASKSFAAECRALRNIRHRN---LVR 704
+G G++GSV R VA+K L+ Q A +++ E R L++++H N L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLD 94
Query: 705 VITSCSSIDFQGNDF-KALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIA 763
V T +SI+ DF + + + L N + A+ +DE + +
Sbjct: 95 VFTPATSIE----DFSEVYLVTTLMGADLNNIVKSQAL------SDEHVQFLVYQ----- 139
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ + Y+H IH DLKPSN+ ++ + + DFGLAR E
Sbjct: 140 --LLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADE 183
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSC 709
++G G++G VY G + +AIK + + S+ E ++++H+N+V+ + S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS- 73
Query: 710 SSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
F N F + + +P GSL L P D E + + + +
Sbjct: 74 ----FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE----QTIGFYTK-----QILEG 120
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDN-NLTAHVGDFGLAR 808
+ YLH + +H D+K N+L++ + + DFG ++
Sbjct: 121 LKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 157
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 72/182 (39%), Gaps = 43/182 (23%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
F +G GSFG V+ +G A+KVL ++ L+ + H N R
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI----------VVRLKQVEHTNDER 57
Query: 705 VITSCSSI--------DFQGNDFKALVYQYMPNGSLENWLH-----PDAIPQTDEENDEI 751
++ S + FQ ++ Y+ G L + L P+ + +
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF------- 110
Query: 752 RNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQ 811
A +V A++YLH + I+ DLKP NILLD N + DFG A+
Sbjct: 111 ----------YAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157
Query: 812 EV 813
+V
Sbjct: 158 DV 159
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y P G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+++D V DFGLA+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNLV 703
++ T +IG GSFG VY+ G +VAIK + LQ K F E + +R + H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ----DKRFKNRELQIMRKLDHCNIV 76
Query: 704 RV-ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
R+ SS + + + LV Y+P H QT L ++
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQT---------LPVIYVKLY 127
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA-HVGDFGLAR 808
+ ++ Y+H H D+KP N+LLD + + DFG A+
Sbjct: 128 MYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--SKSFAAECRALRNIRHRN---LVRV 705
+G G++GSV + G VA+K L+ Q +K E R L++++H N L+ V
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
T S++ + ND + ++ L N + +D ++ L
Sbjct: 86 FTPARSLE-EFND--VYLVTHLMGADLNN-----IVKCAKLTDDHVQFLIY--------Q 129
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + Y+H IH DLKPSN+ ++ + + DFGLAR
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
IG GS G V G VA+K+++L+ Q + E +R+ +H N+V + S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY- 111
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
G + L+ +++ G+L D + Q ++I ++ V A+
Sbjct: 112 ---LVGEELWVLM-EFLQGGALT-----DIVSQVRLNEEQI--------ATVCEAVLQAL 154
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL-ARLRQEVPNNQ 817
YLH + IH D+K +ILL + + DFG A++ ++VP +
Sbjct: 155 AYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 199
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 34/173 (19%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D F +G G+ G V K G I+A K+++L+++ A +RN R L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPA----------IRNQIIREL 65
Query: 703 VRVITSCSS---IDFQGNDFK----ALVYQYMPNGSLENWL-HPDAIPQTDEENDEIRNL 754
+V+ C+S + F G + ++ ++M GSL+ L IP+
Sbjct: 66 -QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE---------- 114
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+L ++SIA V + YL Q +H D+KPSNIL+++ + DFG++
Sbjct: 115 -ILGKVSIA--VLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS 162
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 19/172 (11%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G+FG VYK + A KV++ + + + + E L + H N+V+++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF- 103
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+ N+ L+ ++ G+++ + P T+ + + TL A+
Sbjct: 104 ---YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTL-----------DAL 148
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
+YLH + IH DLK NIL + + DFG++ + S +G
Sbjct: 149 NYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIG 197
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQG---ASKSFAAECRALRNIRHRN---LVR 704
+G G++GSV R VA+K L+ Q A +++ E R L++++H N L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLD 86
Query: 705 VITSCSSIDFQGNDF-KALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIA 763
V T +SI+ DF + + + L N + A+ +E+ + LL
Sbjct: 87 VFTPATSIE----DFSEVYLVTTLMGADLNNIVKCQAL---SDEHVQFLVYQLLR----- 134
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ Y+H IH DLKPSN+ ++ + + DFGLAR E
Sbjct: 135 -----GLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE 175
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ D+GLAR
Sbjct: 164 LKILDYGLAR 173
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 21/167 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D + +G G+FG V++ T G A K + + ++ E + + +RH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 703 VRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
V + + F+ ++ ++Y++M G L ++ DE ++ E +
Sbjct: 217 VNLHDA-----FEDDNEMVMIYEFMSGGEL-----------FEKVADEHNKMSEDEAVEY 260
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVG--DFGLA 807
V + ++H + +H DLKP NI+ + + DFGL
Sbjct: 261 MRQVCKGLCHMHENNY---VHLDLKPENIMFTTKRSNELKLIDFGLT 304
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G+FG VYK + A KV++ + + + + E L + H N+V+++ +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF- 103
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+ N+ L+ ++ G+++ + P T+ + + TL A+
Sbjct: 104 ---YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTL-----------DAL 148
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+YLH + IH DLK NIL + + DFG++
Sbjct: 149 NYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 66/174 (37%), Gaps = 33/174 (18%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHR-N 701
D F +G GSFG V G A+K+L+ Q + L+ I H N
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQ----------KVVKLKQIEHTLN 91
Query: 702 LVRVITSCS-------SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
R+ + + F+ N +V +Y P G E + H I + E +
Sbjct: 92 EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGG--EMFSHLRRIGRFSEPHARF--- 146
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 147 -------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 190
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 651 IGIGSFGSVYKGT---FDRDGTI--VAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 82
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRN-LTL 756
N+V ++ +C+ G ++ ++ G+L +L + +P D ++ LTL
Sbjct: 83 NVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 21/167 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D + +G G+FG V++ T G A K + + ++ E + + +RH L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 703 VRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
V + + F+ ++ ++Y++M G L ++ DE ++ E +
Sbjct: 111 VNLHDA-----FEDDNEMVMIYEFMSGGEL-----------FEKVADEHNKMSEDEAVEY 154
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVG--DFGLA 807
V + ++H + +H DLKP NI+ + + DFGL
Sbjct: 155 MRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 198
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 30/187 (16%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNIRH 699
TD + IG G+F V + G A K++N + A + E R R ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL-ENWLHPDAIPQTDEENDEIRNLTLLE 758
N+VR+ S S F LV+ + G L E+ + + + D + ++
Sbjct: 63 SNIVRLHDSISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADASH-------CIQ 110
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNL---TAHVGDFGLARLRQEVPN 815
+I A+ LH H Q +H DLKP N+LL + + DFGLA EV
Sbjct: 111 QILEAV--------LHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQG 158
Query: 816 NQSSSVG 822
+Q + G
Sbjct: 159 DQQAWFG 165
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 651 IGIGSFGSVYKGT---FDRDGTI--VAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 82
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRN-LTL 756
N+V ++ +C+ G ++ ++ G+L +L + +P D ++ LTL
Sbjct: 83 NVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 61 IHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIP-GNLSYCSRLIGLYLGRNKLEGS 119
++L +N I PG L L+ LYL N L G +P G ++L L LG N+L
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLTVL 103
Query: 120 IPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELK 179
+ F L +LKEL + N LT +P + +T L ++L N L +IP G L
Sbjct: 104 PSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQL-KSIPH--GAFDRLS 159
Query: 180 SL 181
SL
Sbjct: 160 SL 161
Score = 38.9 bits (89), Expect = 0.012, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 356 NLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDL 415
N Q L + NQ++ P F +L +L +L LG+N L + +L QL +L L N L
Sbjct: 41 NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQL 100
Query: 416 SGAIPEEIFN-ISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNL 464
+ +P +F+ + H+ + L N L +P I L L + N L
Sbjct: 101 T-VLPSAVFDRLVHLKE-LFMCCNKLT-ELPRGIERLTHLTHLALDQNQL 147
Score = 35.8 bits (81), Expect = 0.098, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 10/115 (8%)
Query: 299 NLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQ 358
NL L L +NQ GALP + L L ++++ NQ RL +L+
Sbjct: 65 NLKELYLGSNQL-GALPVGVFD--------SLTQLTVLDLGTNQLTVLPSAVFDRLVHLK 115
Query: 359 FLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQN 413
L M N+L+ E+P L+ L L L N L + + L L +LF N
Sbjct: 116 ELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
Score = 35.8 bits (81), Expect = 0.11, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 89 HNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIP-HF 147
H S+ IP N LYL N++ P F SL NLKEL + N L G +P
Sbjct: 31 HASVPAGIPTNAQI------LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGV 83
Query: 148 LGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLG----GTIPPSIYNLSLLANFSVP 203
++T L + L N L + +L LK L + +P I L+ L + ++
Sbjct: 84 FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALD 143
Query: 204 ENR 206
+N+
Sbjct: 144 QNQ 146
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 316 HSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSF 375
H+ V IP+ + ++ + NQ P L NL+ L + NQL F
Sbjct: 31 HASVPAGIPT------NAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF 84
Query: 376 GNLSSLVKLILGNNNLSGVIPSSL-GNLKQLALLHLFQNDLSGAIPEEIFNISHMSDSLN 434
+L+ L L LG N L+ V+PS++ L L L + N L+ +P I ++H++ L
Sbjct: 85 DSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLT-HLA 141
Query: 435 FARNHLVGSIP 445
+N L SIP
Sbjct: 142 LDQNQL-KSIP 151
Score = 32.7 bits (73), Expect = 0.90, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 83 EALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIP-SEFVSLYNLKELAIQENNLT 141
+ LYL N + PG L LYLG N+L G++P F SL L L + N LT
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT 101
Query: 142 GGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGL 183
+ L+ + + N L +P + +L L L L
Sbjct: 102 VLPSAVFDRLVHLKELFMCCNKL-TELPRGIERLTHLTHLAL 142
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQG---ASKSFAAECRALRNIRHRN---LVR 704
+G G++GSV R VA+K L+ Q A +++ E R L++++H N L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLLD 94
Query: 705 VITSCSSIDFQGNDF-KALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIA 763
V T +SI+ DF + + + L N + A+ +DE + +
Sbjct: 95 VFTPATSIE----DFSEVYLVTTLMGADLNNIVKCQAL------SDEHVQFLVYQ----- 139
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+ + Y+H IH DLKPSN+ ++ + + DFGLAR E
Sbjct: 140 --LLRGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE 183
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 24/143 (16%)
Query: 672 AIKVLNLQLQGASKSFAAECRALR--NIRHRNLVRVITSCSSI-----DFQGNDFKALVY 724
A+K++++ G A E + LR ++ +++R ++ +I ++ N F LV+
Sbjct: 33 AVKIIDVT--GGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 90
Query: 725 QYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHC 784
M G L ++L E +R L ++V A+ L+ +H
Sbjct: 91 DLMKKGELFDYLTEKVTLSEKETRKIMRAL---------LEVICALHKLN------IVHR 135
Query: 785 DLKPSNILLDNNLTAHVGDFGLA 807
DLKP NILLD+++ + DFG +
Sbjct: 136 DLKPENILLDDDMNIKLTDFGFS 158
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 651 IGIGSFGSVYKGT---FDRDGTI--VAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 82
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRN-LTL 756
N+V ++ +C+ G ++ ++ G+L +L + +P D ++ LTL
Sbjct: 83 NVVNLLGACTK---PGGPL-MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 35/167 (20%)
Query: 651 IGIGSFGSVYKGTFD-RDGTI-VAIKVLNLQLQGASKSFAAECRALRNIRHR----NLVR 704
+G G+FGSV +G + R I VAIKVL QG K+ E I H+ +VR
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLK---QGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWL--HPDAIPQTDEENDEIRNLT-LLERIS 761
+I C + + LV + G L +L + IP + N+ LL ++S
Sbjct: 75 LIGVCQA------EALMLVMEMAGGGPLHKFLVGKREEIP--------VSNVAELLHQVS 120
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + +++H DL N+LL N A + DFGL++
Sbjct: 121 MGMKYLEEKNFVHR---------DLAARNVLLVNRHYAKISDFGLSK 158
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQ-LQGASKSFAAECRALRNIRHRN 701
D + ++G G+F V R +VAIK + + L+G S E L I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+V + I ++ L+ Q + G L + + E D R
Sbjct: 78 IV----ALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYT---ERDASR--------- 120
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNIL---LDNNLTAHVGDFGLARLR 810
+ V AV YLH +H DLKP N+L LD + + DFGL+++
Sbjct: 121 LIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 169
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y P G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+++D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK 189
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 330 LVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSS--FGNLSSLVKLILG 387
L SL ++++D+NQF + L NL+ L + L G + S F L+SL L+L
Sbjct: 78 LSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLR 137
Query: 388 NNNLSGVIPSSLG-NLKQLALLHLFQNDLSGAIPEEIFNI 426
+NN+ + P+S N+++ +L L N + E++ N
Sbjct: 138 DNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNF 177
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 351 MSRLQNLQFLNMRHNQLSGEI--PSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALL 408
SRLQ+LQFL + Q G + ++F LSSL+ L L N + + L L +L
Sbjct: 50 FSRLQDLQFLKVEQ-QTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108
Query: 409 HLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVV 459
L Q +L GA+ F S + R++ + I P L + R V+
Sbjct: 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVL 159
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 15/168 (8%)
Query: 17 HHFCDWEGITCSPRHRRVTVLDLKSKGLIGSLSPQIGNL---SFLREIHLSNNTIQGKIP 73
++ WE ++ +T LDL G S++ + + + ++ + LSN+ G
Sbjct: 197 EYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF 256
Query: 74 GEIGR------LFR-LEA-----LYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIP 121
G F+ LEA LS + + + S+ + L L L +N++
Sbjct: 257 GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDD 316
Query: 122 SEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNIP 169
+ F L +LKELA+ N L +TSL+ I L N + P
Sbjct: 317 NAFWGLTHLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 364
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQ-LQGASKSFAAECRALRNIRHRN 701
D + ++G G+F V R +VAIK + + L+G S E L I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+V + I ++ L+ Q + G L + + E D R
Sbjct: 78 IV----ALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYT---ERDASR--------- 120
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNIL---LDNNLTAHVGDFGLARLR 810
+ V AV YLH +H DLKP N+L LD + + DFGL+++
Sbjct: 121 LIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 169
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIK---VLNLQLQGASKSFAAECRALRNIRHRN 701
F IG G F VY+ DG VA+K + +L A E L+ + H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+++ S F ++ +V + G L I ++ I T+ +
Sbjct: 94 VIKYYAS-----FIEDNELNIVLELADAGDLSR-----MIKHFKKQKRLIPERTVWKYF- 142
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + SA++++H +H D+KP+N+ + +GD GL R
Sbjct: 143 --VQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRF 185
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 26/172 (15%)
Query: 651 IGIGSFGSVYKGT---FDRDGT--IVAIKVLNLQLQGAS----KSFAAECRALRNI-RHR 700
+G G+FG V + D+ T VA+K+L +GA+ ++ +E + L +I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLK---EGATHSEHRALMSELKILIHIGHHL 93
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP---DAIPQTDEENDEIRN-LTL 756
N+V ++ +C+ G +V ++ G+L +L + +P E D ++ LTL
Sbjct: 94 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPE--DLYKDFLTL 147
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + VA +++L IH DL NILL + DFGLAR
Sbjct: 148 EHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 36/173 (20%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNL--QLQGASKSFAAECRALRNIRHRNL 702
+ IG G++G+V+K IVA+K + L +G S E L+ ++H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 703 VRVITSCSS-------IDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
VR+ S +F D K Y NG L+ P+ +
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKK--YFDSCNGDLD----PEIVK------------- 104
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
S + + + H +H DLKP N+L++ N + +FGLAR
Sbjct: 105 -----SFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 45/184 (24%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRH 699
K + F ++G GSF +V VL +L S+ +A + R+I
Sbjct: 6 KRPEDFKFGKILGEGSFSTV---------------VLAREL-ATSREYAIKILEKRHIIK 49
Query: 700 RNLVRVITS----CSSID----------FQGNDFKALVYQYMPNGSLENWLHPDAIPQTD 745
N V +T S +D FQ ++ Y NG L ++ I D
Sbjct: 50 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFD 107
Query: 746 EENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
E R A ++ SA++YLH + IH DLKP NILL+ ++ + DFG
Sbjct: 108 E---------TCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 154
Query: 806 LARL 809
A++
Sbjct: 155 TAKV 158
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQ-LQGASKSFAAECRALRNIRHRN 701
D + ++G G+F V R +VAIK + + L+G S E L I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+V + I ++ L+ Q + G L + + E D R
Sbjct: 78 IV----ALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYT---ERDASR--------- 120
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNIL---LDNNLTAHVGDFGLARLR 810
+ V AV YLH +H DLKP N+L LD + + DFGL+++
Sbjct: 121 LIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 169
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 45/184 (24%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRH 699
K + F ++G GSF +V VL +L S+ +A + R+I
Sbjct: 7 KRPEDFKFGKILGEGSFSTV---------------VLAREL-ATSREYAIKILEKRHIIK 50
Query: 700 RNLVRVITS----CSSID----------FQGNDFKALVYQYMPNGSLENWLHPDAIPQTD 745
N V +T S +D FQ ++ Y NG L ++ I D
Sbjct: 51 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFD 108
Query: 746 EENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
E R A ++ SA++YLH + IH DLKP NILL+ ++ + DFG
Sbjct: 109 E---------TCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 155
Query: 806 LARL 809
A++
Sbjct: 156 TAKV 159
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 24/143 (16%)
Query: 672 AIKVLNLQLQGASKSFAAECRALR--NIRHRNLVRVITSCSSI-----DFQGNDFKALVY 724
A+K++++ G A E + LR ++ +++R ++ +I ++ N F LV+
Sbjct: 46 AVKIIDVT--GGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 103
Query: 725 QYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHC 784
M G L ++L E +R L ++V A+ L+ +H
Sbjct: 104 DLMKKGELFDYLTEKVTLSEKETRKIMRAL---------LEVICALHKLN------IVHR 148
Query: 785 DLKPSNILLDNNLTAHVGDFGLA 807
DLKP NILLD+++ + DFG +
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFS 171
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 45/184 (24%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRH 699
K + F ++G GSF +V VL +L S+ +A + R+I
Sbjct: 4 KRPEDFKFGKILGEGSFSTV---------------VLAREL-ATSREYAIKILEKRHIIK 47
Query: 700 RNLVRVITS----CSSID----------FQGNDFKALVYQYMPNGSLENWLHPDAIPQTD 745
N V +T S +D FQ ++ Y NG L ++ I D
Sbjct: 48 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFD 105
Query: 746 EENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
E R A ++ SA++YLH + IH DLKP NILL+ ++ + DFG
Sbjct: 106 E---------TCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 152
Query: 806 LARL 809
A++
Sbjct: 153 TAKV 156
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 45/184 (24%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRH 699
K + F ++G GSF +V VL +L S+ +A + R+I
Sbjct: 5 KRPEDFKFGKILGEGSFSTV---------------VLAREL-ATSREYAIKILEKRHIIK 48
Query: 700 RNLVRVITS----CSSID----------FQGNDFKALVYQYMPNGSLENWLHPDAIPQTD 745
N V +T S +D FQ ++ Y NG L ++ I D
Sbjct: 49 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFD 106
Query: 746 EENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFG 805
E R A ++ SA++YLH + IH DLKP NILL+ ++ + DFG
Sbjct: 107 E---------TCTRFYTA-EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 153
Query: 806 LARL 809
A++
Sbjct: 154 TAKV 157
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 24/143 (16%)
Query: 672 AIKVLNLQLQGASKSFAAECRALR--NIRHRNLVRVITSCSSI-----DFQGNDFKALVY 724
A+K++++ G A E + LR ++ +++R ++ +I ++ N F LV+
Sbjct: 46 AVKIIDVT--GGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVF 103
Query: 725 QYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHC 784
M G L ++L E +R L ++V A+ L+ +H
Sbjct: 104 DLMKKGELFDYLTEKVTLSEKETRKIMRAL---------LEVICALHKLN------IVHR 148
Query: 785 DLKPSNILLDNNLTAHVGDFGLA 807
DLKP NILLD+++ + DFG +
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFS 171
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 330 LVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSS--FGNLSSLVKLILG 387
L SL ++++D+NQF + L NL+ L + L G + S F L+SL L+L
Sbjct: 78 LSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLR 137
Query: 388 NNNLSGVIPSSLG-NLKQLALLHLFQNDLSGAIPEEIFNI 426
+NN+ + P+S N+++ +L L N + E++ N
Sbjct: 138 DNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNF 177
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Query: 34 VTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLV 93
V DL + L + + L ++ L+ N I L L L LS N +
Sbjct: 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN-FL 335
Query: 94 GEIPGNL-SYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNIT 152
G I + +L L L N + F+ L NLKELA+ N L +T
Sbjct: 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLT 395
Query: 153 SLEAISLAYNSLGGNIP 169
SL+ I L N + P
Sbjct: 396 SLQKIWLHTNPWDCSCP 412
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 351 MSRLQNLQFLNMRHNQLSGEI--PSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALL 408
SRLQ+LQFL + Q G + ++F LSSL+ L L N + + L L +L
Sbjct: 50 FSRLQDLQFLKVEQ-QTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVL 108
Query: 409 HLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVV 459
L Q +L GA+ F S + R++ + I P L + R V+
Sbjct: 109 TLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVL 159
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 18/160 (11%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSC 709
++G G++G VY G + +AIK + + S+ E ++++H+N+V+ + S
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS- 87
Query: 710 SSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
F N F + + +P GSL L P D E + + + +
Sbjct: 88 ----FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE----QTIGFYTK-----QILEG 134
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDN-NLTAHVGDFGLAR 808
+ YLH + +H D+K N+L++ + + DFG ++
Sbjct: 135 LKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 28 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 87
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 88 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 142
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 143 YVAGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLH---SLDLIYRD 187
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK 210
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y P G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+++D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 651 IGIGSFGSVYKGTF---DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVI 706
IG G FG V++G + + VAIK N + F E +R H ++V++I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
+ + ++ + G L ++L +L L I A +
Sbjct: 78 GVIT------ENPVWIIMELCTLGELRSFLQVRKF-----------SLDLASLILYAYQL 120
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSS 820
++A+ YL + +H D+ N+L+ +N +GDFGL+R ++ ++S
Sbjct: 121 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK 171
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 28 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 87
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 88 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 142
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 143 YVAGG--EMFSHLRRIGRFXEPHARF----------YAAQIVLTFEYLH---SLDLIYRD 187
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAK 210
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQ-LQGASKSFAAECRALRNIRHRN 701
D + ++G G+F V R +VAIK + + L+G S E L I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN 77
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+V + I ++ L+ Q + G L + + E D R
Sbjct: 78 IV----ALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYT---ERDASR--------- 120
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNIL---LDNNLTAHVGDFGLARLR 810
+ V AV YLH +H DLKP N+L LD + + DFGL+++
Sbjct: 121 LIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 169
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 8 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 67
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 68 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 122
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 123 YVAGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLHSL---DLIYRD 167
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 66
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 121
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 122 YVAGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLHSL---DLIYRD 166
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G+FG VYK G + A KV+ + + + + E L H +V+++ +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA-- 76
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+ + ++ ++ P G++ DAI E D R LT + + + A+
Sbjct: 77 ---YYHDGKLWIMIEFCPGGAV------DAIML---ELD--RGLTEPQIQVVCRQMLEAL 122
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
++LH + IH DLK N+L+ + DFG++ + + S +G
Sbjct: 123 NFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIG 171
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 66
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 121
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 122 YVAGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLHSL---DLIYRD 166
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G+FG VYK G + A KV+ + + + + E L H +V+++ +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA-- 84
Query: 711 SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAV 770
+ + ++ ++ P G++ DAI E D R LT + + + A+
Sbjct: 85 ---YYHDGKLWIMIEFCPGGAV------DAIML---ELD--RGLTEPQIQVVCRQMLEAL 130
Query: 771 DYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
++LH + IH DLK N+L+ + DFG++ + + S +G
Sbjct: 131 NFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIG 179
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y P G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFXEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+++D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 178
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 64/149 (42%), Gaps = 22/149 (14%)
Query: 657 GSVYKGTFDRDGTIVAIKVLNLQLQGASKS--FAAECRALRNIRHRNLVRVITSCSSIDF 714
G ++KG + G + +KVL ++ KS F EC LR H N++ V+ +C S
Sbjct: 24 GELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS--- 78
Query: 715 QGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLH 774
L+ + P GSL N LH D+ + + A+D A +L
Sbjct: 79 PPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQS----------QAVKFALDXARGXAFL- 127
Query: 775 HHCQEPTI--HCDLKPSNILLDNNLTAHV 801
H EP I H L ++ +D + TA +
Sbjct: 128 -HTLEPLIPRHA-LNSRSVXIDEDXTARI 154
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 66
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 121
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 122 YVAGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLHSL---DLIYRD 166
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 66
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 121
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 122 YVAGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLHSL---DLIYRD 166
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 178
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 66
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 121
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 122 YVAGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLH---SLDLIYRD 166
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 67/174 (38%), Gaps = 33/174 (18%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHR-N 701
D F +G GSFG V G A+K+L+ Q + L+ I H N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLN 91
Query: 702 LVRVITSCS-------SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
R++ + + F+ N +V +Y P G E + H I + E +
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARF--- 146
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+++D V DFG A+
Sbjct: 147 -------YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 66
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 121
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 122 YVAGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLHSL---DLIYRD 166
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 66
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 121
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 122 YVAGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLHSL---DLIYRD 166
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 67/174 (38%), Gaps = 33/174 (18%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHR-N 701
D F +G GSFG V G A+K+L+ Q + L+ I H N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLN 91
Query: 702 LVRVITSCS-------SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
R++ + + F+ N +V +Y P G E + H I + E +
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFSEPHARF--- 146
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+++D V DFG A+
Sbjct: 147 -------YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 163
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 66
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 121
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 122 YVAGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLHSL---DLIYRD 166
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 182
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 182
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 66
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 121
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 122 YVAGG--EMFSHLRRIGRFXEPHARF----------YAAQIVLTFEYLHSL---DLIYRD 166
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+L+D V DFG A+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 20/174 (11%)
Query: 635 YESLLKATDGFSSTHLIG-IGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRA 693
YE + + + +IG +G FG VYK + A KV++ + + + + E
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 694 LRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN 753
L + H N+V+++ + + N+ L+ ++ G+++ + P T+ + +
Sbjct: 61 LASCDHPNIVKLLDAF----YYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCK 115
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
TL A++YLH + IH DLK NIL + + DFG++
Sbjct: 116 QTL-----------DALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 184
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+ G E + H I + E +
Sbjct: 88 PFLVKL-----EFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------- 132
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 133 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 67/174 (38%), Gaps = 33/174 (18%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHR-N 701
D F +G GSFG V G A+K+L+ Q + L+ I H N
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQ----------KVVKLKQIEHTLN 91
Query: 702 LVRVITSCS-------SIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
R++ + + F+ N +V +Y P G E + H I + E +
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGG--EMFSHLRRIGRFXEPHARF--- 146
Query: 755 TLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+++D V DFG A+
Sbjct: 147 -------YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
++ SA++YLH + IH DLKP NILL+ ++ + DFG A++
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKV 186
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+ G E + H I + E +
Sbjct: 96 PFLVKL-----EFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARF-------- 140
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 141 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+ G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 24/166 (14%)
Query: 651 IGIGSFGSVYKGTF---DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVI 706
IG G FG V++G + + VAIK N + F E +R H ++V++I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
+ + ++ + G L ++L +L L I A +
Sbjct: 458 GVIT------ENPVWIIMELCTLGELRSFLQVRKF-----------SLDLASLILYAYQL 500
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
++A+ YL + +H D+ N+L+ +N +GDFGL+R ++
Sbjct: 501 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+ G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ FGLAR
Sbjct: 164 LKILGFGLAR 173
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 32/175 (18%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN---LQLQGASKSFAAECRALRNIR 698
+D + ++G GSFG V G A+KV++ ++ + +S E + L+ +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEI---RNLT 755
H N++++ F+ + LV + G L DEI + +
Sbjct: 91 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGEL---------------FDEIISRKRFS 130
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLD---NNLTAHVGDFGLA 807
++ I V S + Y+H + +H DLKP N+LL+ + + DFGL+
Sbjct: 131 EVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 182
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+ G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+ G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFXEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 20/132 (15%)
Query: 282 SGESDEMSFIHSLANCSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHN 341
+G + S +L NC N+ + V IP++ +L +++N
Sbjct: 4 AGCPSQCSCDQTLVNCQNIRLAS--------------VPAGIPTDKQRLW------LNNN 43
Query: 342 QFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGN 401
Q P L NLQ L N+L+ F L+ L +L L +N+L + + N
Sbjct: 44 QITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDN 103
Query: 402 LKQLALLHLFQN 413
LK L ++L+ N
Sbjct: 104 LKSLTHIYLYNN 115
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 34/80 (42%)
Query: 83 EALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTG 142
+ L+L++N + PG + L LY NKL F L L +L + +N+L
Sbjct: 36 QRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKS 95
Query: 143 GIPHFLGNITSLEAISLAYN 162
N+ SL I L N
Sbjct: 96 IPRGAFDNLKSLTHIYLYNN 115
Score = 30.4 bits (67), Expect = 4.5, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 59 REIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEG 118
+ + L+NN I PG L L+ LY + N L G ++L L L N L+
Sbjct: 36 QRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK- 94
Query: 119 SIP-SEFVSLYNLKELAIQEN 138
SIP F +L +L + + N
Sbjct: 95 SIPRGAFDNLKSLTHIYLYNN 115
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 19/139 (13%)
Query: 291 IHSLANCSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEE 350
+ ++A ++ L+L + Q P + L +L ++ +D NQ P
Sbjct: 106 VSAIAGLQSIKTLDLTSTQITDVTP-----------LAGLSNLQVLYLDLNQITNISP-- 152
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHL 410
++ L NLQ+L++ +NQ++ P NLS L L +N +S + P L +L L +HL
Sbjct: 153 LAGLTNLQYLSIGNNQVNDLTP--LANLSKLTTLRADDNKISDISP--LASLPNLIEVHL 208
Query: 411 FQNDLSGAIPEEIFNISHM 429
N +S P + N+S++
Sbjct: 209 KDNQISDVSP--LANLSNL 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 87 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 651 IGIGSFGSVYKGTF---DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVI 706
IG G FG V++G + + VAIK N + F E +R H ++V++I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR--NLTLLERISIAI 764
+ + ++ + G L ++L ++R +L L I A
Sbjct: 78 GVIT------ENPVWIIMELCTLGELRSFL-------------QVRKYSLDLASLILYAY 118
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSS 820
+++A+ YL + +H D+ N+L+ +N +GDFGL+R ++ ++S
Sbjct: 119 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 28/168 (16%)
Query: 651 IGIGSFGSVYKGTF---DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVI 706
IG G FG V++G + + VAIK N + F E +R H ++V++I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR--NLTLLERISIAI 764
+ + ++ + G L ++L ++R +L L I A
Sbjct: 106 GVIT------ENPVWIIMELCTLGELRSFL-------------QVRKYSLDLASLILYAY 146
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+++A+ YL + +H D+ N+L+ +N +GDFGL+R ++
Sbjct: 147 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 191
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 80/203 (39%), Gaps = 28/203 (13%)
Query: 614 RGGSGKEPSEPILRRA----LRKVSYESLLKAT-DGFSSTHLIGIGSFGSVYKGTFDRDG 668
+ GS +E + L +A L+K S A D F +G GSFG V G
Sbjct: 7 KKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESG 66
Query: 669 TIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQ 725
A+K+L+ Q K E R L+ + LV++ F+ N +V +
Sbjct: 67 NHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL-----EFSFKDNSNLYMVME 121
Query: 726 YMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCD 785
Y+ G E + H I + E + A + +YLH I+ D
Sbjct: 122 YVAGG--EMFSHLRRIGRFSEPHARF----------YAAQIVLTFEYLHSL---DLIYRD 166
Query: 786 LKPSNILLDNNLTAHVGDFGLAR 808
LKP N+++D V DFG A+
Sbjct: 167 LKPENLIIDQQGYIQVTDFGFAK 189
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 83/215 (38%), Gaps = 12/215 (5%)
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSF--GNLSSLVKLILGNNNLSGVIPSSLGNLKQLALL 408
+ +L NLQ L++ HN + S NLS L L L +N G+ + QL LL
Sbjct: 343 LEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELL 402
Query: 409 HLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLSGEI 468
L L P+ F H LN L S + L VLR + N+
Sbjct: 403 DLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQD-- 460
Query: 469 PSEIGSCFYLQEIYMAENFFRGSI------PSSLVSLKDLREIDLSQNNLSGKIPISLER 522
I LQ + E S + SL + +DLS N+L+ SL
Sbjct: 461 -GTITKTNLLQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLTCDSIDSLSH 519
Query: 523 LPLEYLNLSFNDLEGQVPT-KGIFANASAISVSGN 556
L YLNL+ N + P I + S I++S N
Sbjct: 520 LKGIYLNLAANSINIISPRLLPILSQQSTINLSHN 554
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHL 410
SRL NL FL++ Q++ +F + L L+L N L + +SL K L L L
Sbjct: 50 FSRLMNLTFLDLTRCQINWIHEDTFQSHHQLSTLVLTGNPLIFMAETSLNGPKSLKHLFL 109
Query: 411 FQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPK---IGNLKVL 454
Q +S + N+ ++ +SL NH+ PK NLKVL
Sbjct: 110 IQTGISNLEFIPVHNLENL-ESLYLGSNHISSIKFPKDFPARNLKVL 155
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+ G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFAEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ I I +A AV++LH + +H DLKPSNI + VGDFGL
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 211
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 20/177 (11%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIH--SLAN 296
AF S L+ L + N S F + SL L++ GE ++ +I +
Sbjct: 142 AFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL-------GELKKLEYISEGAFEG 194
Query: 297 CSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQN 356
NL +LNL K +P+ + LV L +EM N F P L +
Sbjct: 195 LFNLKYLNLGMCNIK----------DMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSS 243
Query: 357 LQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQN 413
L+ L + ++Q+S ++F L+SLV+L L +NNLS + L+ L LHL N
Sbjct: 244 LKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHN 300
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 133/341 (39%), Gaps = 41/341 (12%)
Query: 59 REIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEG 118
R ++L N IQ L LE L L NS+ G + + L L L N L
Sbjct: 78 RYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLT- 136
Query: 119 SIPS-EFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKE 177
IPS F L L+EL ++ NN IP S A+N + + LG+LK+
Sbjct: 137 VIPSGAFEYLSKLRELWLR-NNPIESIP------------SYAFNRVPSLMRLDLGELKK 183
Query: 178 LKSLGLGGTIPPSIYNLSLLANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFP 237
L+ + G ++NL L N + + + ++S N F P
Sbjct: 184 LEYISEGAF--EGLFNLKYL-NLGMCNIKDMPNLTPLVGL-----EELEMSGNHFPEIRP 235
Query: 238 LAFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESD---------EM 288
+F S+L+ L ++ + F + SL LN+A NNL S D E+
Sbjct: 236 GSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVEL 295
Query: 289 SFIHSLANCSNLSFLNLVANQFKGALP-HSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKI 347
H+ NC + +A + +P +S G + + + YL+E+D F+
Sbjct: 296 HLHHNPWNCD--CDILWLAWWLREYIPTNSTCCGRCHAPM-HMRGRYLVEVDQASFQCSA 352
Query: 348 PEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGN 388
P M ++L R +L P S VK +L N
Sbjct: 353 PFIMDAPRDLNISEGRMAELKCRTPP-----MSSVKWLLPN 388
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHL 410
++ L L+ L M N P SF LSSL KL + N+ +S + ++ L L L+L
Sbjct: 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNL 273
Query: 411 FQNDLSGAIPEEIF 424
N+LS ++P ++F
Sbjct: 274 AHNNLS-SLPHDLF 286
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 356 NLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDL 415
N ++LN+ N + +F +L L L LG N++ + + L L L LF N L
Sbjct: 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135
Query: 416 SGAIPEEIFNISHMSDSLNFARNHLVGSIP 445
+ IP F L + RN+ + SIP
Sbjct: 136 T-VIPSGAFEYLSKLREL-WLRNNPIESIP 163
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 87 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 45/183 (24%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLN--------------------------LQLQGAS 684
IG GS+G V + D T A+KVL+ +Q +G
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
+ E L+ + H N+V+++ +D D +V++ + G + P P +
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLV---EVLDDPNEDHLYMVFELVNQGPVMEV--PTLKPLS 135
Query: 745 DEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDF 804
+++ R D+ ++YLH+ + IH D+KPSN+L+ + + DF
Sbjct: 136 EDQ----------ARFYFQ-DLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADF 181
Query: 805 GLA 807
G++
Sbjct: 182 GVS 184
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ DF LAR
Sbjct: 164 LKILDFYLAR 173
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 323 IPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLV 382
IP ++ + +L + +DHN+ + E++ R L L + HNQ+ S L +L
Sbjct: 187 IPKDLPE--TLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLR 244
Query: 383 KLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLS 416
+L L NN LS V P+ L +LK L +++L N+++
Sbjct: 245 ELHLDNNKLSRV-PAGLPDLKLLQVVYLHTNNIT 277
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 58 LREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLE 117
L E+HL +N IQ ++ R +L L L HN + G+LS+ L L+L NKL
Sbjct: 195 LNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL- 253
Query: 118 GSIPSEFVSLYNLKELAIQENNLT 141
+P+ L L+ + + NN+T
Sbjct: 254 SRVPAGLPDLKLLQVVYLHTNNIT 277
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 20 CDWEGITCSPRH--RRVTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIG 77
C G+ P+ T+LDL++ + L L + L NN I
Sbjct: 40 CSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFS 99
Query: 78 RLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQE 137
L +L+ LY+S N LV EIP NL S L+ L + N++ F L N+ + +
Sbjct: 100 PLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGG 156
Query: 138 NNL 140
N L
Sbjct: 157 NPL 159
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 347 IPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLA 406
+P+E+S + L++++N +S F L L L+L NN +S + + L++L
Sbjct: 48 VPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQ 105
Query: 407 LLHLFQNDLSGAIP 420
L++ +N L P
Sbjct: 106 KLYISKNHLVEIPP 119
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 28/168 (16%)
Query: 651 IGIGSFGSVYKGTF---DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVI 706
IG G FG V++G + + VAIK N + F E +R H ++V++I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR--NLTLLERISIAI 764
+ + ++ + G L ++L ++R +L L I A
Sbjct: 81 GVIT------ENPVWIIMELCTLGELRSFL-------------QVRKYSLDLASLILYAY 121
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+++A+ YL + +H D+ N+L+ +N +GDFGL+R ++
Sbjct: 122 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 166
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 28/175 (16%)
Query: 651 IGIGSFGSVYKGTF---DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVI 706
IG G FG V++G + + VAIK N + F E +R H ++V++I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR--NLTLLERISIAI 764
+ + ++ + G L ++L ++R +L L I A
Sbjct: 83 GVIT------ENPVWIIMELCTLGELRSFL-------------QVRKYSLDLASLILYAY 123
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSS 819
+++A+ YL + +H D+ N+L+ +N +GDFGL+R ++ ++S
Sbjct: 124 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 175
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 30/192 (15%)
Query: 637 SLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRAL 694
+ + TD + +G G+F V + A K++N + A + E R
Sbjct: 25 TCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARIC 84
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL-ENWLHPDAIPQTDEENDEIRN 753
R ++H N+VR+ S S F LV+ + G L E+ + + + D +
Sbjct: 85 RLLKHPNIVRLHDSISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADASH----- 134
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNL---TAHVGDFGLARLR 810
+ +V+++H H +H DLKP N+LL + + DFGLA
Sbjct: 135 --------CIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA--- 180
Query: 811 QEVPNNQSSSVG 822
EV Q + G
Sbjct: 181 IEVQGEQQAWFG 192
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 28/168 (16%)
Query: 651 IGIGSFGSVYKGTF---DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVI 706
IG G FG V++G + + VAIK N + F E +R H ++V++I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR--NLTLLERISIAI 764
+ + ++ + G L ++L ++R +L L I A
Sbjct: 75 GVIT------ENPVWIIMELCTLGELRSFL-------------QVRKYSLDLASLILYAY 115
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+++A+ YL + +H D+ N+L+ +N +GDFGL+R ++
Sbjct: 116 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 160
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 19/170 (11%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK---SFAAECRALRNIR 698
+D + ++G G V+ R VA+KVL L F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H +V V + + + +V +Y+ +L + +H + +T
Sbjct: 71 HPAIVAVYATGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEG------------PMTPKR 117
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + D A+++ H Q IH D+KP+NI++ V DFG+AR
Sbjct: 118 AIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIAR 164
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ D GLAR
Sbjct: 164 LKILDAGLAR 173
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 651 IGIGSFGSVYKGTF---DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVI 706
IG G FG V++G + + VAIK N + F E +R H ++V++I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR--NLTLLERISIAI 764
+ + ++ + G L ++L ++R +L L I A
Sbjct: 78 GVIT------ENPVWIIMELCTLGELRSFL-------------QVRKYSLDLASLILYAY 118
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSS 820
+++A+ YL + +H D+ N+L+ +N +GDFGL+R ++ ++S
Sbjct: 119 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 26/165 (15%)
Query: 649 HLIGIGSFGSVYKGTFDR---DGTIVAIKVLNLQLQGASK-SFAAECRALRNIRHRNLVR 704
++G G FG VY+G + + VA+K +K F +E ++N+ H ++V+
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+I + ++ + P G L ++L + + ++ LTL + ++
Sbjct: 90 LIGIIE------EEPTWIIMELYPYGELGHYL--------ERNKNSLKVLTL---VLYSL 132
Query: 765 DVASAVDYLHH-HCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ A+ YL +C +H D+ NIL+ + +GDFGL+R
Sbjct: 133 QICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 87 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 20/177 (11%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIH--SLAN 296
AF S L+ L + N S F + SL L++ GE +S+I +
Sbjct: 131 AFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL-------GELKRLSYISEGAFEG 183
Query: 297 CSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQN 356
SNL +LNL + IP+ + L+ L +++ N P L +
Sbjct: 184 LSNLRYLNLAMCNLR----------EIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMH 232
Query: 357 LQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQN 413
LQ L M +Q+ ++F NL SLV++ L +NNL+ + L L +HL N
Sbjct: 233 LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 2/160 (1%)
Query: 354 LQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQN 413
L NL L + N+L+ +F LS L +L L NN + + + + L L L +
Sbjct: 111 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 170
Query: 414 DLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLSGEIPSEIG 473
I E F LN A +L P + L L +S N+LS P
Sbjct: 171 KRLSYISEGAFEGLSNLRYLNLAMCNLREI--PNLTPLIKLDELDLSGNHLSAIRPGSFQ 228
Query: 474 SCFYLQEIYMAENFFRGSIPSSLVSLKDLREIDLSQNNLS 513
+LQ+++M ++ + ++ +L+ L EI+L+ NNL+
Sbjct: 229 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 35/199 (17%)
Query: 346 KIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQL 405
++P+ +S N + LN+ NQ+ +SF +L L L L N++ + + L L
Sbjct: 57 EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANL 114
Query: 406 ALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLS 465
L LF N L+ IP F L + RN+ + SIP N
Sbjct: 115 NTLELFDNRLT-TIPNGAFVYLSKLKEL-WLRNNPIESIPSYAFN--------------- 157
Query: 466 GEIPS----EIGSCFYLQEIYMAENFFRGSIPSSLVSLKDLREIDLSQNNLSGKIPISLE 521
IPS ++G L Y++E F G L +LR ++L+ NL +IP
Sbjct: 158 -RIPSLRRLDLGELKRLS--YISEGAFEG--------LSNLRYLNLAMCNLR-EIPNLTP 205
Query: 522 RLPLEYLNLSFNDLEGQVP 540
+ L+ L+LS N L P
Sbjct: 206 LIKLDELDLSGNHLSAIRP 224
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 109/302 (36%), Gaps = 38/302 (12%)
Query: 59 REIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEG 118
R ++L N IQ L LE L LS N + G + + L L L N+L
Sbjct: 67 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTT 126
Query: 119 SIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKEL 178
FV L LKEL ++ NN IP S A+N + LG+LK L
Sbjct: 127 IPNGAFVYLSKLKELWLR-NNPIESIP------------SYAFNRIPSLRRLDLGELKRL 173
Query: 179 KSLGLG---GTIPPSIYNLSLLANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGS 235
+ G G NL++ +P +S N S
Sbjct: 174 SYISEGAFEGLSNLRYLNLAMCNLREIPN-----------LTPLIKLDELDLSGNHLSAI 222
Query: 236 FPLAFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLA 295
P +F +LQ L ++ + F +++SL +N+A NNL D + +H L
Sbjct: 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLE 282
Query: 296 ---------NCSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGK 346
NC N L L + K P + + + L Y+ E+D N F
Sbjct: 283 RIHLHHNPWNC-NCDILWL-SWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCY 340
Query: 347 IP 348
P
Sbjct: 341 AP 342
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVIT 707
IG G+ G V Y +R+ VAIK L S+ F + A R R L++V+
Sbjct: 32 IGSGAQGIVVAAYDAILERN---VAIKKL-------SRPFQNQTHAKRAYRELVLMKVVN 81
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIAI- 764
+ I L+ + P SLE + + + + N ++ + L ER+S +
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 134 QMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 28/168 (16%)
Query: 651 IGIGSFGSVYKGTF---DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVI 706
IG G FG V++G + + VAIK N + F E +R H ++V++I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR--NLTLLERISIAI 764
+ + ++ + G L ++L ++R +L L I A
Sbjct: 80 GVIT------ENPVWIIMELCTLGELRSFL-------------QVRKYSLDLASLILYAY 120
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
+++A+ YL + +H D+ N+L+ +N +GDFGL+R ++
Sbjct: 121 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 165
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
++ IG G++G V T VAIK ++ + Q + E + L RH N++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 704 --RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
R I S+++ A+ Y+ +E L+ + ND I
Sbjct: 105 GIRDILRASTLE-------AMRDVYIVQDLMETDLY-KLLKSQQLSNDHI--------CY 148
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+L++ + DFGLAR+
Sbjct: 149 FLYQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARI 193
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 26/165 (15%)
Query: 649 HLIGIGSFGSVYKGTFDR---DGTIVAIKVLNLQLQGASK-SFAAECRALRNIRHRNLVR 704
++G G FG VY+G + + VA+K +K F +E ++N+ H ++V+
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+I + ++ + P G L ++L + + ++ LTL + ++
Sbjct: 78 LIGIIEE------EPTWIIMELYPYGELGHYL--------ERNKNSLKVLTL---VLYSL 120
Query: 765 DVASAVDYLHH-HCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ A+ YL +C +H D+ NIL+ + +GDFGL+R
Sbjct: 121 QICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ D GLAR
Sbjct: 164 LKILDRGLAR 173
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 298 SNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNL 357
SN++ LNL NQ + LP P+ + L +++ N PE L L
Sbjct: 25 SNITVLNLTHNQLR-RLP--------PTNFTRYSQLAILDAGFNSISKLEPELCQILPLL 75
Query: 358 QFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSG 417
+ LN++HN+LS +F ++L +L L +N++ + + N K L L L N LS
Sbjct: 76 KVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSS 135
Query: 418 AI------------------------PEEIFNISHMS-DSLNFARNHLVGSIPPKIGNLK 452
EE+ + + S L+ + N L P +
Sbjct: 136 TKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIG 195
Query: 453 VLRMFVVSSNNLSGEIPSEIGSCFYL-----QEIYMAENFFRGSIPSSLVSLK--DLREI 505
L ++++ L+ + ++ C+ L Q + +A N + S+ LK +L ++
Sbjct: 196 KLFALLLNNAQLNPHLTEKL--CWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQL 253
Query: 506 DLSQNNLSGKIPISLERLP-LEYLNLSFNDLEGQVP 540
DLS NNL S LP L YL+L +N+++ P
Sbjct: 254 DLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSP 289
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVIT 707
IG G+ G V Y +R+ VAIK L S+ F + A R R L++V+
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKL-------SRPFQNQTHAKRAYRELVLMKVVN 81
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIAI- 764
+ I L+ + P SLE + + + + N ++ + L ER+S +
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 134 QMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 90/235 (38%), Gaps = 43/235 (18%)
Query: 612 RRRGGSGKEPSEPILR---------------------RALRKVSYESLLKATDGFSSTHL 650
R R G+G +P+LR R L+ E+ D F +
Sbjct: 133 RARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRV 192
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVIT 707
+G G FG V+ G + A K LN + K + E + L + R +V +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
+ F+ LV M G + ++ DE+N + I +
Sbjct: 253 A-----FETKTDLCLVMTIMNGGDIRYHIY-----NVDEDNPGFQEP---RAIFYTAQIV 299
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
S +++LH Q I+ DLKP N+LLD++ + D GLA E+ Q+ + G
Sbjct: 300 SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKG 348
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 87 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 34/190 (17%)
Query: 627 RRALRKVSYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGA--S 684
R+ L K +E + + + +G G++GSV + G VA+K L+ Q +
Sbjct: 10 RQELNKTIWE----VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHA 65
Query: 685 KSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQT 744
K E R L++++H N++ L+ + P SLE + D T
Sbjct: 66 KRTYRELRLLKHMKHENVI-----------------GLLDVFTPARSLEEF--NDVYLVT 106
Query: 745 DEENDEIRNLTLLERIS------IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLT 798
++ N+ ++++ + + + Y+H IH DLKPSN+ ++ +
Sbjct: 107 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCE 163
Query: 799 AHVGDFGLAR 808
+ D GLAR
Sbjct: 164 LKILDGGLAR 173
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 26/165 (15%)
Query: 649 HLIGIGSFGSVYKGTFDR---DGTIVAIKVLNLQLQGASK-SFAAECRALRNIRHRNLVR 704
++G G FG VY+G + + VA+K +K F +E ++N+ H ++V+
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+I + ++ + P G L ++L + + ++ LTL + ++
Sbjct: 74 LIGIIEE------EPTWIIMELYPYGELGHYL--------ERNKNSLKVLTL---VLYSL 116
Query: 765 DVASAVDYLHH-HCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ A+ YL +C +H D+ NIL+ + +GDFGL+R
Sbjct: 117 QICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 72/165 (43%), Gaps = 31/165 (18%)
Query: 651 IGIGSFGSVYKGTFD-RDGTI-VAIKVLNLQLQGASKSFAAECRALRNIRHR----NLVR 704
+G G+FGSV +G + R I VAIKVL QG K+ E I H+ +VR
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLK---QGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT-LLERISIA 763
+I C + + LV + G L +L E + N+ LL ++S+
Sbjct: 401 LIGVCQA------EALMLVMEMAGGGPLHKFL------VGKREEIPVSNVAELLHQVSMG 448
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ +++H +L N+LL N A + DFGL++
Sbjct: 449 MKYLEEKNFVHR---------NLAARNVLLVNRHYAKISDFGLSK 484
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 19/170 (11%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK---SFAAECRALRNIR 698
+D + ++G G V+ R VA+KVL L F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H +V V + + + +V +Y+ +L + +H + +T
Sbjct: 71 HPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEG------------PMTPKR 117
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + D A+++ H Q IH D+KP+NI++ V DFG+AR
Sbjct: 118 AIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIAR 164
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 66/169 (39%), Gaps = 23/169 (13%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRH 699
D F +G GSFG V G A+K+L+ Q K E R L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLER 759
LV++ F+ N +V +Y+ G E + H I + E +
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGG--EMFSHLRRIGRFSEPHARF-------- 145
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
A + +YLH I+ DLKP N+L+D V DFG A+
Sbjct: 146 --YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 30/166 (18%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNI--RHRNLVRVITS 708
+G G +G V++G + G VA+K+ + + + +S+ E + RH N++ I S
Sbjct: 16 VGKGRYGEVWRGLWH--GESVAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIAS 70
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ L+ Y +GSL ++L + TL +++ + V++
Sbjct: 71 DMTSRNSSTQL-WLITHYHEHGSLYDFL---------------QRQTLEPHLALRLAVSA 114
Query: 769 AVDYLHHHCQ------EPTI-HCDLKPSNILLDNNLTAHVGDFGLA 807
A H H + +P I H D K N+L+ +NL + D GLA
Sbjct: 115 ACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA 160
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 79
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 80 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYL 124
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 125 LYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 90/235 (38%), Gaps = 43/235 (18%)
Query: 612 RRRGGSGKEPSEPILR---------------------RALRKVSYESLLKATDGFSSTHL 650
R R G+G +P+LR R L+ E+ D F +
Sbjct: 133 RARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRV 192
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVIT 707
+G G FG V+ G + A K LN + K + E + L + R +V +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
+ F+ LV M G + ++ DE+N + I +
Sbjct: 253 A-----FETKTDLCLVMTIMNGGDIRYHIY-----NVDEDNPGFQEP---RAIFYTAQIV 299
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
S +++LH Q I+ DLKP N+LLD++ + D GLA E+ Q+ + G
Sbjct: 300 SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKG 348
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 90/235 (38%), Gaps = 43/235 (18%)
Query: 612 RRRGGSGKEPSEPILR---------------------RALRKVSYESLLKATDGFSSTHL 650
R R G+G +P+LR R L+ E+ D F +
Sbjct: 133 RARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRV 192
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVIT 707
+G G FG V+ G + A K LN + K + E + L + R +V +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
+ F+ LV M G + ++ DE+N + I +
Sbjct: 253 A-----FETKTDLCLVMTIMNGGDIRYHIY-----NVDEDNPGFQEP---RAIFYTAQIV 299
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
S +++LH Q I+ DLKP N+LLD++ + D GLA E+ Q+ + G
Sbjct: 300 SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKG 348
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 32/175 (18%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN---LQLQGASKSFAAECRALRNIR 698
+D + ++G GSFG V G A+KV++ ++ + +S E + L+ +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEI---RNLT 755
H N++++ F+ + LV + G L DEI + +
Sbjct: 108 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGEL---------------FDEIISRKRFS 147
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDN---NLTAHVGDFGLA 807
++ I V S + Y+H + +H DLKP N+LL++ + + DFGL+
Sbjct: 148 EVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 199
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVIT 707
IG G+ G V Y +R+ VAIK L S+ F + A R R L++V+
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKL-------SRPFQNQTHAKRAYRELVLMKVVN 81
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIAI- 764
+ I L+ + P SLE + + + + N ++ + L ER+S +
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 32/175 (18%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN---LQLQGASKSFAAECRALRNIR 698
+D + ++G GSFG V G A+KV++ ++ + +S E + L+ +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEI---RNLT 755
H N++++ F+ + LV + G L DEI + +
Sbjct: 109 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGEL---------------FDEIISRKRFS 148
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDN---NLTAHVGDFGLA 807
++ I V S + Y+H + +H DLKP N+LL++ + + DFGL+
Sbjct: 149 EVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 200
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 32/175 (18%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN---LQLQGASKSFAAECRALRNIR 698
+D + ++G GSFG V G A+KV++ ++ + +S E + L+ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEI---RNLT 755
H N++++ F+ + LV + G L DEI + +
Sbjct: 85 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGEL---------------FDEIISRKRFS 124
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDN---NLTAHVGDFGLA 807
++ I V S + Y+H + +H DLKP N+LL++ + + DFGL+
Sbjct: 125 EVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVIT 707
IG G+ G V Y +R+ VAIK L S+ F + A R R L++V+
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKL-------SRPFQNQTHAKRAYRELVLMKVVN 81
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIAI- 764
+ I L+ + P SLE + + + + N ++ + L ER+S +
Sbjct: 82 HKNII--------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLY 133
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 134 QMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 19/170 (11%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK---SFAAECRALRNIR 698
+D + ++G G V+ R VA+KVL L F E + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H +V V + + + +V +Y+ +L + +H + +T
Sbjct: 88 HPAIVAVYDTGEA-ETPAGPLPYIVMEYVDGVTLRDIVHTEG------------PMTPKR 134
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
I + D A+++ H Q IH D+KP+NI++ V DFG+AR
Sbjct: 135 AIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIAR 181
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 90/235 (38%), Gaps = 43/235 (18%)
Query: 612 RRRGGSGKEPSEPILR---------------------RALRKVSYESLLKATDGFSSTHL 650
R R G+G +P+LR R L+ E+ D F +
Sbjct: 133 RARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSKYFLRFLQWKWLEAQPMGEDWFLDFRV 192
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAA---ECRALRNIRHRNLVRVIT 707
+G G FG V+ G + A K LN + K + E + L + R +V +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 708 SCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
+ F+ LV M G + ++ DE+N + I +
Sbjct: 253 A-----FETKTDLCLVMTIMNGGDIRYHIY-----NVDEDNPGFQEP---RAIFYTAQIV 299
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSSVG 822
S +++LH Q I+ DLKP N+LLD++ + D GLA E+ Q+ + G
Sbjct: 300 SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLA---VELKAGQTKTKG 348
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 23/160 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ--GASKSFAAECRALRNIRHRNLVRVITS 708
IG G++G VYK + G A+K + L+ + G + E L+ ++H N+V++
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ LV+++ L D D + ++T S + + +
Sbjct: 69 IHT-----KKRLVLVFEH---------LDQDLKKLLDVCEGGLESVTAK---SFLLQLLN 111
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ Y H +H DLKP N+L++ + DFGLAR
Sbjct: 112 GIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 23/160 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ--GASKSFAAECRALRNIRHRNLVRVITS 708
IG G++G VYK + G A+K + L+ + G + E L+ ++H N+V++
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ LV+++ L D D + ++T S + + +
Sbjct: 69 IHT-----KKRLVLVFEH---------LDQDLKKLLDVCEGGLESVTAK---SFLLQLLN 111
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ Y H +H DLKP N+L++ + DFGLAR
Sbjct: 112 GIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 124
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 125 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 169
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 170 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 23/160 (14%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ--GASKSFAAECRALRNIRHRNLVRVITS 708
IG G++G VYK + G A+K + L+ + G + E L+ ++H N+V++
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 709 CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVAS 768
+ LV+++ L D D + ++T S + + +
Sbjct: 69 IHT-----KKRLVLVFEH---------LDQDLKKLLDVCEGGLESVTAK---SFLLQLLN 111
Query: 769 AVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ Y H +H DLKP N+L++ + DFGLAR
Sbjct: 112 GIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 27/174 (15%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNI 697
K +D + +G G+F V + G A K++N + A + E R R +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL-ENWLHPDAIPQTDEENDEIRNLTL 756
+H N+VR+ S Q F LV+ + G L E+ + + + D +
Sbjct: 63 QHPNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-------C 110
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNN---LTAHVGDFGLA 807
+++I ++ Y H + +H +LKP N+LL + + DFGLA
Sbjct: 111 IQQI------LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 124
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 125 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 169
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 170 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 87
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 88 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 132
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 133 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNIRHRNLVRVITS 708
+G G+F V + G A K++N + A + E R R ++H N+VR+ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 709 CSSIDFQGNDFKALVYQYMPNGSL-ENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVA 767
S +G+ + L++ + G L E+ + + + D + +++I A+
Sbjct: 90 ISE---EGHHY--LIFDLVTGGELFEDIVAREYYSEADASH-------CIQQILEAV--- 134
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNL---TAHVGDFGLARLRQEVPNNQSSSVG 822
LH H Q +H DLKP N+LL + L + DFGLA EV Q + G
Sbjct: 135 -----LHCH-QMGVVHRDLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQAWFG 183
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 33 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 87
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 88 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 132
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 133 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 31 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 85
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 86 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 130
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 131 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 87 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 87 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 25 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 79
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 80 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 124
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 125 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 80
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 81 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 125
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 126 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y DR+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 26 IGSGAQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 80
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
+L+ + P +LE + + + + N ++ + L ER+S
Sbjct: 81 ---------------SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYL 125
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 126 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 29/171 (16%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR-HRNLVRVITSC 709
+G GSF K + A+K+++ +++ ++ E AL+ H N+V++
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK---EITALKLCEGHPNIVKLHEV- 74
Query: 710 SSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
F LV + + G L E + ++ + E I + SA
Sbjct: 75 ----FHDQLHTFLVMELLNGGELF------------ERIKKKKHFSETEASYIMRKLVSA 118
Query: 770 VDYLHHHCQEPTIHCDLKPSNILL---DNNLTAHVGDFGLARLRQEVPNNQ 817
V ++H +H DLKP N+L ++NL + DFG ARL+ P+NQ
Sbjct: 119 VSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP--PDNQ 164
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 22/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
FS +IG G FG VY G + A+K L+ + K E AL +LV
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD---KKRIKMKQGETLALNERIMLSLVS 247
Query: 705 V----ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
C S F D + + M G L L + + +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV------------FSEADMR 295
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
A ++ ++++H+ ++ DLKP+NILLD + + D GLA
Sbjct: 296 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 22/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
FS +IG G FG VY G + A+K L+ + K E AL +LV
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD---KKRIKMKQGETLALNERIMLSLVS 246
Query: 705 V----ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
C S F D + + M G L L + + +
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV------------FSEADMR 294
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
A ++ ++++H+ ++ DLKP+NILLD + + D GLA
Sbjct: 295 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y +R+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
L+ + P SLE + + + + N ++ + L ER+S
Sbjct: 87 ---------------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 70/174 (40%), Gaps = 27/174 (15%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNI 697
K +D + +G G+F V + G A K++N + A + E R R +
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 85
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL-ENWLHPDAIPQTDEENDEIRNLTL 756
+H N+VR+ S Q F LV+ + G L E+ + + + D +
Sbjct: 86 QHPNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-------- 132
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNN---LTAHVGDFGLA 807
+ ++ Y H + +H +LKP N+LL + + DFGLA
Sbjct: 133 -----CIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 22/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
FS +IG G FG VY G + A+K L+ + K E AL +LV
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD---KKRIKMKQGETLALNERIMLSLVS 247
Query: 705 V----ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
C S F D + + M G L L + + +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV------------FSEADMR 295
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
A ++ ++++H+ ++ DLKP+NILLD + + D GLA
Sbjct: 296 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 22/167 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
FS +IG G FG VY G + A+K L+ + K E AL +LV
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD---KKRIKMKQGETLALNERIMLSLVS 247
Query: 705 V----ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
C S F D + + M G L L + + +
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV------------FSEADMR 295
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
A ++ ++++H+ ++ DLKP+NILLD + + D GLA
Sbjct: 296 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 38/185 (20%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVL-------------NLQLQGASKS 686
K + + +G G++G V + AIKV+ N ++ +
Sbjct: 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE 92
Query: 687 FAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL-ENWLHPDAIPQTD 745
E L+++ H N++++ F+ + LV ++ G L E ++ + D
Sbjct: 93 IYNEISLLKSLDHPNIIKLFDV-----FEDKKYFYLVTEFYEGGELFEQIINRHKFDECD 147
Query: 746 EENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNN---LTAHVG 802
N I + S + YLH H +H D+KP NILL+N L +
Sbjct: 148 AAN-------------IMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIV 191
Query: 803 DFGLA 807
DFGL+
Sbjct: 192 DFGLS 196
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 85 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 128
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 129 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARV 173
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 83 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 126
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 127 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y +R+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
L+ + P SLE + + + + N ++ + L ER+S
Sbjct: 87 ---------------GLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 87 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 130
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 131 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 105 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 148
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 149 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 193
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 83 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 126
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 127 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 85 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 128
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 129 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 89 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 132
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 133 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 90 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 133
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 134 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 85 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 128
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 129 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 85 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 128
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 129 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 90 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 133
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 134 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 91 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 134
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 135 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 179
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 82 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 125
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 126 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 170
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 89 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 132
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 133 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 89 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 132
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 133 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 93 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 136
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 137 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 181
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 85 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 128
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 129 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 89 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 132
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 133 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 24/174 (13%)
Query: 651 IGIGSFGSVYKGTF---DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVI 706
IG G FG V++G + + VAIK N + F E +R H ++V++I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
+ + ++ + G L ++L +L L I A +
Sbjct: 78 GVIT------ENPVWIIMELCTLGELRSFLQVRKF-----------SLDLASLILYAYQL 120
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSSS 820
++A+ YL + +H D+ N+L+ +GDFGL+R ++ ++S
Sbjct: 121 STALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 24/166 (14%)
Query: 651 IGIGSFGSVYKGTF---DRDGTIVAIKVL-NLQLQGASKSFAAECRALRNIRHRNLVRVI 706
IG G FG V++G + + VAIK N + F E +R H ++V++I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
+ + ++ + G L ++L +L L I A +
Sbjct: 458 GVIT------ENPVWIIMELCTLGELRSFLQVRKF-----------SLDLASLILYAYQL 500
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQE 812
++A+ YL + +H D+ N+L+ +GDFGL+R ++
Sbjct: 501 STALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 543
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 18/88 (20%)
Query: 722 LVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPT 781
LV++ M GS+ + +H + R+ LE + DVASA+D+LH+ +
Sbjct: 88 LVFEKMRGGSILSHIH------------KRRHFNELEASVVVQDVASALDFLHN---KGI 132
Query: 782 IHCDLKPSNILLD--NNLT-AHVGDFGL 806
H DLKP NIL + N ++ + DFGL
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGL 160
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y +R+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 34 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 88
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
L+ + P SLE + + + + N ++ + L ER+S
Sbjct: 89 ---------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 133
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 134 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y +R+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 37 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 91
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
L+ + P SLE + + + + N ++ + L ER+S
Sbjct: 92 ---------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 136
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 137 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y +R+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 33 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 87
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
L+ + P SLE + + + + N ++ + L ER+S
Sbjct: 88 ---------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 132
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 133 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y +R+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
L+ + P SLE + + + + N ++ + L ER+S
Sbjct: 87 ---------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y +R+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
L+ + P SLE + + + + N ++ + L ER+S
Sbjct: 87 ---------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y +R+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
L+ + P SLE + + + + N ++ + L ER+S
Sbjct: 87 ---------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 27/174 (15%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNI 697
K +D + +G G+F V + G A K++N + A + E R R +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL-ENWLHPDAIPQTDEENDEIRNLTL 756
+H N+VR+ S Q F LV+ + G L E+ + + + D +
Sbjct: 63 QHPNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-------C 110
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNN---LTAHVGDFGLA 807
+++I ++ Y H +H +LKP N+LL + + DFGLA
Sbjct: 111 IQQI------LESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 87 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 130
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 131 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y +R+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
L+ + P SLE + + + + N ++ + L ER+S
Sbjct: 87 ---------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 27/174 (15%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNI 697
K +D + +G G+F V + G A K++N + A + E R R +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 698 RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL-ENWLHPDAIPQTDEENDEIRNLTL 756
+H N+VR+ S Q F LV+ + G L E+ + + + D +
Sbjct: 62 QHPNIVRLHDS-----IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH-------C 109
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNN---LTAHVGDFGLA 807
+++I ++ Y H +H +LKP N+LL + + DFGLA
Sbjct: 110 IQQI------LESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D + Q + L L + ND I
Sbjct: 89 GINDIIRAPTIE-QMKD--VYIVQDLMETDLYKLLKCQHL-----SNDHI--------CY 132
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 133 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 32/181 (17%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TDG+ IG+GS+ + A+K+++ + ++ LR +
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---LLRYGQ 74
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N++ + + + +V + M G L + + +R E
Sbjct: 75 HPNIITLKDV-----YDDGKYVYVVTELMKGGELLDKI--------------LRQKFFSE 115
Query: 759 RISIAI--DVASAVDYLHHHCQEPTIHCDLKPSNILL----DNNLTAHVGDFGLAR-LRQ 811
R + A+ + V+YLH + +H DLKPSNIL N + + DFG A+ LR
Sbjct: 116 REASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
Query: 812 E 812
E
Sbjct: 173 E 173
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y +R+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 26 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 80
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
L+ + P SLE + + + + N ++ + L ER+S
Sbjct: 81 ---------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 125
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 126 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 31/166 (18%)
Query: 651 IGIGSFGSV---YKGTFDRDGTIVAIKVLN--LQLQGASKSFAAECRALRNIRHRNLVRV 705
IG G+ G V Y +R+ VAIK L+ Q Q +K E ++ + H+N++
Sbjct: 32 IGSGAQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII-- 86
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEEN-DEIRNLTL-LERISIA 763
L+ + P SLE + + + + N ++ + L ER+S
Sbjct: 87 ---------------GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 764 I-DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + + +LH IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 132 LYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 44/179 (24%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 704 RV--ITSCSSID----------FQGND-FKALVYQYMPNGSLENWLHPDAIPQTDEENDE 750
+ I +I+ G D +K L Q++ N + +L+
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLY------------- 151
Query: 751 IRNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 152 --------------QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV 193
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 109
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 110 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 27/175 (15%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN---LQLQGASKSFAAECRALR 695
LK D F ++G GSFG V+ F + AIK L + + + E R L
Sbjct: 15 LKIED-FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 696 -NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
H L + + FQ + V +Y+ G L H + + D
Sbjct: 74 LAWEHPFLTHMFCT-----FQTKENLFFVMEYLNGGDL--MYHIQSCHKFD--------- 117
Query: 755 TLLERISI-AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
L R + A ++ + +LH + ++ DLK NILLD + + DFG+ +
Sbjct: 118 --LSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAI-KVLNLQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAI K+ + Q + E + L RH N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 89 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 132
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 133 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 108
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 109 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 32/188 (17%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNIRH 699
TD + +G G+F V + G A K++N + A + E R R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL-ENWLHPDAIPQTDEENDEIRNLTLLE 758
N+VR+ S S F LV+ + G L E+ + + + D + ++
Sbjct: 63 PNIVRLHDSISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADASH-------CIQ 110
Query: 759 RISIAIDVASAVDYLHHHCQ-EPTIHCDLKPSNILLDNN---LTAHVGDFGLARLRQEVP 814
+I +++ HC +H DLKP N+LL + + DFGLA EV
Sbjct: 111 QILESVN----------HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQ 157
Query: 815 NNQSSSVG 822
+Q + G
Sbjct: 158 GDQQAWFG 165
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 37.4 bits (85), Expect = 0.037, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 321 GSIPSEIGKLVS-LYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLS 379
S+P+ I LYL + NQ P RL L L++ +NQL+ F L+
Sbjct: 30 ASVPTGIPTTTQVLYLYD---NQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 86
Query: 380 SLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQN 413
L +L L +N L + + NLK L + L N
Sbjct: 87 QLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN 120
Score = 33.5 bits (75), Expect = 0.46, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 358 QFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSG 417
Q L + NQ++ P F L+ L +L L NN L+ + L QL L L N L
Sbjct: 41 QVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK- 99
Query: 418 AIPEEIFN 425
+IP F+
Sbjct: 100 SIPRGAFD 107
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 37.4 bits (85), Expect = 0.037, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 321 GSIPSEIGKLVS-LYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLS 379
S+P+ I LYL + NQ P RL L L++ +NQL+ F L+
Sbjct: 22 ASVPTGIPTTTQVLYLYD---NQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 78
Query: 380 SLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQN 413
L +L L +N L + + NLK L + L N
Sbjct: 79 QLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNN 112
Score = 33.5 bits (75), Expect = 0.47, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 358 QFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSG 417
Q L + NQ++ P F L+ L +L L NN L+ + L QL L L N L
Sbjct: 33 QVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK- 91
Query: 418 AIPEEIFN 425
+IP F+
Sbjct: 92 SIPRGAFD 99
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 782 IHCDLKPSNILLDNNLTAHVGDFGLAR 808
IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 292 HSLANCSNLSFLNLVANQFK-GALPHSIVSGSIPS-EIGKLVSLYLIEMDHNQFEGKIPE 349
H LA +L LNL N F+ G++ + + + S EI L S L+ +D F G
Sbjct: 442 HLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHG---- 497
Query: 350 EMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLH 409
L+N+ L++ HN L+G+ + +L L L + +NN+ + P L L Q ++++
Sbjct: 498 ----LRNVNHLDLSHNSLTGDSMDALSHLKGLY-LNMASNNIRIIPPHLLPALSQQSIIN 552
Query: 410 LFQNDL 415
L N L
Sbjct: 553 LSHNPL 558
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 77/193 (39%), Gaps = 11/193 (5%)
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSF--GNLSSLVKLILGNNNLSGVIPSSLGNLKQLALL 408
+ +L+NLQ L++ H+ + + NL L L L N G+ + QL LL
Sbjct: 345 LEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELL 404
Query: 409 HLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLSGEI 468
+ L P F H+ LN + L S + L+ LR + N+
Sbjct: 405 DVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQD-- 462
Query: 469 PSEIGSCFYLQEIYMAENFFRGSI------PSSLVSLKDLREIDLSQNNLSGKIPISLER 522
I LQ + E S + L+++ +DLS N+L+G +L
Sbjct: 463 -GSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSH 521
Query: 523 LPLEYLNLSFNDL 535
L YLN++ N++
Sbjct: 522 LKGLYLNMASNNI 534
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 782 IHCDLKPSNILLDNNLTAHVGDFGLAR 808
IH DLKPSNI++ ++ T + DFGLAR
Sbjct: 146 IHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 32/188 (17%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNIRH 699
TD + +G G+F V + G A K++N + A + E R R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 700 RNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL-ENWLHPDAIPQTDEENDEIRNLTLLE 758
N+VR+ S S F LV+ + G L E+ + + + D + ++
Sbjct: 63 PNIVRLHDSISE-----EGFHYLVFDLVTGGELFEDIVAREYYSEADASH-------CIQ 110
Query: 759 RISIAIDVASAVDYLHHHCQ-EPTIHCDLKPSNILLDNN---LTAHVGDFGLARLRQEVP 814
+I +++ HC +H DLKP N+LL + + DFGLA EV
Sbjct: 111 QILESVN----------HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA---IEVQ 157
Query: 815 NNQSSSVG 822
+Q + G
Sbjct: 158 GDQQAWFG 165
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 108
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 109 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 32/175 (18%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN---LQLQGASKSFAAECRALRNIR 698
+D + ++G GSFG V G A+KV++ ++ + +S E + L+ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEI---RNLT 755
H N+ ++ F+ + LV + G L DEI + +
Sbjct: 85 HPNIXKLYEF-----FEDKGYFYLVGEVYTGGEL---------------FDEIISRKRFS 124
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDN---NLTAHVGDFGLA 807
++ I V S + Y H + +H DLKP N+LL++ + + DFGL+
Sbjct: 125 EVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 21/169 (12%)
Query: 644 GFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA-AECRALRNIRHRNL 702
+++ +IG GSFG V++ + KVL K F E + +R ++H N+
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ------DKRFKNRELQIMRIVKHPNV 94
Query: 703 VRVITS-CSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
V + S+ D + F LV +Y+P H + QT + +L
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQT---------MPMLLIKL 145
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLD-NNLTAHVGDFGLARL 809
+ ++ Y+H H D+KP N+LLD + + DFG A++
Sbjct: 146 YMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 37.0 bits (84), Expect = 0.045, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 6/95 (6%)
Query: 319 VSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNL 378
V IP+ +++ LY+ NQ P L L +LN+ NQL+ F L
Sbjct: 34 VPAGIPTTT-QVLHLYI-----NQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKL 87
Query: 379 SSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQN 413
+ L L L N L + NLK L ++LF N
Sbjct: 88 TKLTHLALHINQLKSIPMGVFDNLKSLTHIYLFNN 122
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN-LQLQGASKSFAAECRALRNIRHRNLV 703
+++ IG G++G V + + VAIK ++ + Q + E + L RH N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 704 RV--ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
+ I +I+ Q D Y+ +E L+ + ND I
Sbjct: 87 GINDIIRAPTIE-QMKDV------YIVQDLMETDLY-KLLKTQHLSNDHI--------CY 130
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARL 809
+ + Y+H +H DLKPSN+LL+ + DFGLAR+
Sbjct: 131 FLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARV 175
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+T+ + IS + VA +++L IH DL NILL N + DFGLAR
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLAR 247
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 148/365 (40%), Gaps = 67/365 (18%)
Query: 246 LQSLEILGNNFFGKLSVNFGDM--KSLAY-LNVAINNLGSGESDEMSFIHSLANCSNLSF 302
L+ L++ GN + ++ NF + KS A+ L +A + +G+G H++ + +F
Sbjct: 206 LEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFG-----FHNIKDPDQNTF 260
Query: 303 LNLVANQFKGA-LPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLN 361
L + + L H V L L ++ + +N+ E L NLQ LN
Sbjct: 261 AGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLN 320
Query: 362 MRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSG---- 417
+ +N L S+F L + + L N+++ + + L++L L L N L+
Sbjct: 321 LSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFI 380
Query: 418 -AIPEEIF----------------NISHMSDSLNFARNHLVGSIPPKIGNLKVL-----R 455
+IP +IF N+ H+S+ N N + ++ +L++L R
Sbjct: 381 PSIP-DIFLSGNKLVTLPKINLTANLIHLSE--NRLENLDILYFLLRVPHLQILILNQNR 437
Query: 456 MFVVSSNNLSGEIPS---------------EIGSCF-------YLQEIYMAENFFRGSIP 493
S + E PS E C+ +LQ +Y+ N+ P
Sbjct: 438 FSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPP 497
Query: 494 SSLVSLKDLREIDLSQNNLSGKIPISLERLP--LEYLNLSFNDLEGQVPTKGIFANASAI 551
L LR + L+ N L+ +S LP LE L++S N L P +F + S +
Sbjct: 498 GVFSHLTALRGLSLNSNRLT---VLSHNDLPANLEILDISRNQLLA--PNPDVFVSLSVL 552
Query: 552 SVSGN 556
++ N
Sbjct: 553 DITHN 557
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 20/204 (9%)
Query: 239 AFSNASNLQSLEILGNNFFGKL-SVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANC 297
AF NLQ L L N G+L S NF + +AY+++ N++ + F+ L
Sbjct: 309 AFYGLDNLQVLN-LSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTL 367
Query: 298 SNLSFLNLVANQFKGALPHSIVSGSIPSEIGKL-VSLYLIEMDHNQFEG-KIPEEMSRLQ 355
+L L F ++P +SG+ + K+ ++ LI + N+ E I + R+
Sbjct: 368 -DLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVP 426
Query: 356 NLQFLNMRHNQLSG----EIPSSFGNLSSLVKLILGNNNLSGVIPSSLG-----NLKQLA 406
+LQ L + N+ S + PS SL +L LG N L + L L L
Sbjct: 427 HLQILILNQNRFSSCSGDQTPSEN---PSLEQLFLGENMLQLAWETELCWDVFEGLSHLQ 483
Query: 407 LLHLFQNDLSGAIPEEIFNISHMS 430
+L+L N L+ ++P +F SH++
Sbjct: 484 VLYLNHNYLN-SLPPGVF--SHLT 504
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 15/107 (14%)
Query: 58 LREIHLSNNTIQGKIPGEIGR-----LFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLG 112
L ++ L N +Q E+ L L+ LYL+HN L PG S+ + L GL L
Sbjct: 453 LEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLN 512
Query: 113 RNKL----EGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLE 155
N+L +P+ NL+ L I N L P +++ L+
Sbjct: 513 SNRLTVLSHNDLPA------NLEILDISRNQLLAPNPDVFVSLSVLD 553
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 27/169 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G G V+ + VAIK + L + K E + +R + H N+V+V
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 711 SIDFQGNDFKA---------LVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
Q D +V +YM L N L + EE+ + LL
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPLL---EEHARLFMYQLLR--- 131
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDN-NLTAHVGDFGLARL 809
+ Y+H +H DLKP+N+ ++ +L +GDFGLAR+
Sbjct: 132 -------GLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 30/167 (17%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHR-NLVRVITSC 709
+G G F V + G A K L + +G +CRA I H ++ + SC
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ------DCRA--EILHEIAVLELAKSC 88
Query: 710 SSI-----DFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
+ ++ L+ +Y G + + P+ + + END IR L+++I
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIR---LIKQI---- 140
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNL---TAHVGDFGLAR 808
V YLH Q +H DLKP NILL + + DFG++R
Sbjct: 141 --LEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 27/175 (15%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGT--IVAIKVLNLQL---QGASKSFAAECRA 693
+K TD F+ ++G GSFG V DR GT + AIK+L + + E R
Sbjct: 16 VKLTD-FNFLMVLGKGSFGKVMLA--DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRV 72
Query: 694 LRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN 753
L + + + SC FQ D V +Y+ G L + ++
Sbjct: 73 LALLDKPPFLTQLHSC----FQTVDRLYFVMEYVNGGDLMYHIQ------------QVGK 116
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + A +++ + +LH + I+ DLK N++LD+ + DFG+ +
Sbjct: 117 FKEPQAVFYAAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 109
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 110 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 108
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 109 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 108
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 109 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 43/207 (20%)
Query: 637 SLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN----LQLQGAS-KSFAAEC 691
SLL+ + IG GS+G V ++ I AIK++N Q+ + E
Sbjct: 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEV 79
Query: 692 RALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHP-----------DA 740
R ++ + H N+ R+ ++ + LV + G L + L+ D
Sbjct: 80 RLMKKLHHPNIARLYEV-----YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDV 134
Query: 741 I-------PQTDEE--NDEI----RNLTLLER----ISIAIDVASAVDYLHHHCQEPTIH 783
+ P+ +EE N I +L ++R +I + SA+ YLH+ + H
Sbjct: 135 VKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICH 191
Query: 784 CDLKPSNILLDNNLTAHVG--DFGLAR 808
D+KP N L N + + DFGL++
Sbjct: 192 RDIKPENFLFSTNKSFEIKLVDFGLSK 218
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 109
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 110 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 109
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 110 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 109
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 110 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 27/175 (15%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN---LQLQGASKSFAAECRALR 695
LK D F ++G GSFG V+ F + AIK L + + + E R L
Sbjct: 14 LKIED-FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72
Query: 696 -NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNL 754
H L + + FQ + V +Y+ G L H + + D
Sbjct: 73 LAWEHPFLTHMFCT-----FQTKENLFFVMEYLNGGDL--MYHIQSCHKFD--------- 116
Query: 755 TLLERISI-AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
L R + A ++ + +LH + ++ DLK NILLD + + DFG+ +
Sbjct: 117 --LSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 108
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 109 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 20/177 (11%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLA--N 296
AF S L+ L + N S F + SL L++ GE + +I A
Sbjct: 102 AFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL-------GELKRLEYISEAAFEG 154
Query: 297 CSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQN 356
NL +LNL K IP+ + LV L +E+ N+ + P L +
Sbjct: 155 LVNLRYLNLGMCNLK----------DIPN-LTALVRLEELELSGNRLDLIRPGSFQGLTS 203
Query: 357 LQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQN 413
L+ L + H Q++ ++F +L SL +L L +NNL + L +L +HL N
Sbjct: 204 LRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 29/136 (21%)
Query: 55 LSFLREIHLSNNTIQG-------KIPG----EIGRLFRLEALYLSHNSLVG--------- 94
LS LRE+ L NN I+ ++P ++G L RLE Y+S + G
Sbjct: 106 LSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLE--YISEAAFEGLVNLRYLNL 163
Query: 95 ------EIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFL 148
+IP NL+ RL L L N+L+ P F L +L++L + + +
Sbjct: 164 GMCNLKDIP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAF 222
Query: 149 GNITSLEAISLAYNSL 164
++ SLE ++L++N+L
Sbjct: 223 DDLKSLEELNLSHNNL 238
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHL 410
++ L L+ L + N+L P SF L+SL KL L + ++ + ++ +LK L L+L
Sbjct: 174 LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNL 233
Query: 411 FQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLSGEIPS 470
N+L ++P ++F H + ++ N P N VL + S L +PS
Sbjct: 234 SHNNLM-SLPHDLFTPLHRLERVHLNHN-------PWHCNCDVLWL----SWWLKETVPS 281
Query: 471 EIGSC 475
C
Sbjct: 282 NTTCC 286
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 27/170 (15%)
Query: 645 FSSTHLIGIGSFGSVY---KGTFDRDGTIVAIKVLN---LQLQGASKSFAAECRALRNIR 698
F ++G GSFG V+ K T G + A+KVL L+++ ++ E L ++
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVN 88
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H +V++ + FQ L+ ++ G L L + + ++ + L L
Sbjct: 89 HPFVVKLHYA-----FQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL-- 141
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+D+LH I+ DLKP NILLD + DFGL++
Sbjct: 142 ----------GLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 178
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 346 KIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQL 405
K+P+++ + L++++N+++ F NL +L LIL NN +S + P + L +L
Sbjct: 45 KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102
Query: 406 ALLHLFQNDLSGAIPEEI 423
L+L +N L +PE++
Sbjct: 103 ERLYLSKNQLK-ELPEKM 119
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 68/174 (39%), Gaps = 28/174 (16%)
Query: 34 VTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLV 93
+LDL++ + NL L + L NN I PG L +LE LYLS N L
Sbjct: 54 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL- 112
Query: 94 GEIPGNLSYC----------------------SRLIGLYLGRNKLE--GSIPSEFVSLYN 129
E+P + +++I + LG N L+ G F +
Sbjct: 113 KELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 172
Query: 130 LKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGL 183
L + I + N+T IP L SL + L N + +SL L L LGL
Sbjct: 173 LSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGL 223
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 52 IGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSL 92
+ N LRE+HL+NN + K+PG + ++ +YL +N++
Sbjct: 236 LANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 346 KIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQL 405
K+P+++ + L++++N+++ F NL +L LIL NN +S + P + L +L
Sbjct: 45 KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102
Query: 406 ALLHLFQNDLSGAIPEEI 423
L+L +N L +PE++
Sbjct: 103 ERLYLSKNQLK-ELPEKM 119
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 68/174 (39%), Gaps = 28/174 (16%)
Query: 34 VTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLV 93
+LDL++ + NL L + L NN I PG L +LE LYLS N L
Sbjct: 54 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL- 112
Query: 94 GEIPGNLSYC----------------------SRLIGLYLGRNKLE--GSIPSEFVSLYN 129
E+P + +++I + LG N L+ G F +
Sbjct: 113 KELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 172
Query: 130 LKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGL 183
L + I + N+T IP L SL + L N + +SL L L LGL
Sbjct: 173 LSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGL 223
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 52 IGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSL 92
+ N LRE+HL+NN + K+PG + ++ +YL +N++
Sbjct: 236 LANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 66 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 109
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 110 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 26/150 (17%)
Query: 651 IGIGSFGSVYKGTFDRDG-------TIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLV 703
+G G+F ++KG G T V +KVL+ + S+SF + + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIA 763
C D LV +++ GSL+ +L + + +L ++ +A
Sbjct: 76 LNYGVCVC-----GDENILVQEFVKFGSLDTYLKKNK-----------NCINILWKLEVA 119
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNILL 793
+A+A+ +L + IH ++ NILL
Sbjct: 120 KQLAAAMHFLE---ENTLIHGNVCAKNILL 146
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 20/177 (11%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLA--N 296
AF S L+ L + N S F + SL L++ GE + +I A
Sbjct: 102 AFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDL-------GELKRLEYISEAAFEG 154
Query: 297 CSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQN 356
NL +LNL K IP+ + LV L +E+ N+ + P L +
Sbjct: 155 LVNLRYLNLGMCNLK----------DIPN-LTALVRLEELELSGNRLDLIRPGSFQGLTS 203
Query: 357 LQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQN 413
L+ L + H Q++ ++F +L SL +L L +NNL + L +L +HL N
Sbjct: 204 LRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 29/136 (21%)
Query: 55 LSFLREIHLSNNTIQG-------KIPG----EIGRLFRLEALYLSHNSLVG--------- 94
LS LRE+ L NN I+ ++P ++G L RLE Y+S + G
Sbjct: 106 LSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLE--YISEAAFEGLVNLRYLNL 163
Query: 95 ------EIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFL 148
+IP NL+ RL L L N+L+ P F L +L++L + + +
Sbjct: 164 GMCNLKDIP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAF 222
Query: 149 GNITSLEAISLAYNSL 164
++ SLE ++L++N+L
Sbjct: 223 DDLKSLEELNLSHNNL 238
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHL 410
++ L L+ L + N+L P SF L+SL KL L + ++ + ++ +LK L L+L
Sbjct: 174 LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNL 233
Query: 411 FQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSIPPKIGNLKVLRMFVVSSNNLSGEIPS 470
N+L ++P ++F H + ++ N P N VL + S L +PS
Sbjct: 234 SHNNLM-SLPHDLFTPLHRLERVHLNHN-------PWHCNCDVLWL----SWWLKETVPS 281
Query: 471 EIGSC 475
C
Sbjct: 282 NTTCC 286
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 31/163 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHRNLVRVITSC 709
+G G++G V VA+K+++++ ++ E + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK----- 68
Query: 710 SSIDFQGN----DFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLERISIAI 764
F G+ + + L +Y G L + + PD +P+ D +
Sbjct: 69 ----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR-------------FFH 111
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 112 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 31/163 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHRNLVRVITSC 709
+G G++G V VA+K+++++ ++ E + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK----- 68
Query: 710 SSIDFQGN----DFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLERISIAI 764
F G+ + + L +Y G L + + PD +P+ D +
Sbjct: 69 ----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR-------------FFH 111
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 112 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 31/163 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHRNLVRVITSC 709
+G G++G V VA+K+++++ ++ E + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK----- 68
Query: 710 SSIDFQGN----DFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLERISIAI 764
F G+ + + L +Y G L + + PD +P+ D +
Sbjct: 69 ----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR-------------FFH 111
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 112 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 31/163 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHRNLVRVITSC 709
+G G++G V VA+K+++++ ++ E + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK----- 68
Query: 710 SSIDFQGN----DFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLERISIAI 764
F G+ + + L +Y G L + + PD +P+ D +
Sbjct: 69 ----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR-------------FFH 111
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 112 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 31/163 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHRNLVRVITSC 709
+G G++G V VA+K+++++ ++ E + + H N+V+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK----- 68
Query: 710 SSIDFQGN----DFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLERISIAI 764
F G+ + + L +Y G L + + PD +P+ D +
Sbjct: 69 ----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR-------------FFH 111
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 112 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 35.8 bits (81), Expect = 0.087, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 31/163 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHRNLVRVITSC 709
+G G++G V VA+K+++++ ++ E + + H N+V+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK----- 69
Query: 710 SSIDFQGN----DFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLERISIAI 764
F G+ + + L +Y G L + + PD +P+ D +
Sbjct: 70 ----FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR-------------FFH 112
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 113 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 64 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 107
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 108 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G++G V VA+K+++++ ++ E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 108
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 109 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|1XEU|A Chain A, Crystal Structure Of Internalin C From Listeria
Monocytogenes
Length = 263
Score = 35.8 bits (81), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 58 LREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLE 117
L+E+HLS+N I P + L +LE L ++ N L + G S C L L+L N+L
Sbjct: 65 LKELHLSHNQISDLSP--LKDLTKLEELSVNRNRL-KNLNGIPSAC--LSRLFLDNNELR 119
Query: 118 GSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKE 177
+ + L NL+ L+I+ N L + LG ++ LE + L N + L +LK+
Sbjct: 120 DT--DSLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEITNT--GGLTRLKK 173
Query: 178 LKSLGLGG 185
+ + L G
Sbjct: 174 VNWIDLTG 181
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 21/167 (12%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNL 702
D + +G G+FG V++ G + K +N + E + + H L
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 703 VRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISI 762
+ + + F+ L+ +++ G L D E ++ E I+
Sbjct: 111 INLHDA-----FEDKYEMVLILEFLSGGEL-----------FDRIAAEDYKMSEAEVINY 154
Query: 763 AIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVG--DFGLA 807
+ ++H H +H D+KP NI+ + + V DFGLA
Sbjct: 155 MRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 26/150 (17%)
Query: 651 IGIGSFGSVYKGTFDRDG-------TIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLV 703
+G G+F ++KG G T V +KVL+ + S+SF + + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 704 RVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIA 763
C F G++ LV +++ GSL+ +L + + +L ++ +A
Sbjct: 76 LNYGVC----FCGDE-NILVQEFVKFGSLDTYLKKNK-----------NCINILWKLEVA 119
Query: 764 IDVASAVDYLHHHCQEPTIHCDLKPSNILL 793
+A A+ +L + IH ++ NILL
Sbjct: 120 KQLAWAMHFLE---ENTLIHGNVCAKNILL 146
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 21/162 (12%)
Query: 650 LIGIGSFGSVYK----GTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRV 705
L+G GS+G V + T R + K ++ + E + LR +RH+N++++
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71
Query: 706 ITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAID 765
+ D N+ K +Y M D++P+ + + +
Sbjct: 72 V------DVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE--------KRFPVCQAHGYFCQ 117
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ ++YLH + +H D+KP N+LL T + G+A
Sbjct: 118 LIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVA 156
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 62/157 (39%), Gaps = 24/157 (15%)
Query: 37 LDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQ--GKIPGEIGRLFRLEALYLSHNSL-V 93
LD + L ++ G+L+ L + L N ++ KI ++ L+ L +S NS+
Sbjct: 329 LDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 94 GEIPGNLSYCSRLIGLYLGRNKLEG---------------------SIPSEFVSLYNLKE 132
E G+ S+ L+ L + N L SIP + V L L+E
Sbjct: 389 DEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKSIPKQVVKLEALQE 448
Query: 133 LAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNIP 169
L + N L +TSL+ I L N + P
Sbjct: 449 LNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 27/175 (15%)
Query: 228 SNNFFSGSFPLAFSNASNLQSLEILGNNF-----FGKLSVNFGDMKSLAYLNVAINNLGS 282
SNN + + F N +L LE L K++ MKSL L+++ N++
Sbjct: 332 SNNLLTDT---VFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388
Query: 283 GESD-EMSFIHSLANCSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHN 341
E + S+ SL + LN+ +N + +P I ++++ N
Sbjct: 389 DEKKGDCSWTKSLLS------LNMSSNILTDT-----IFRCLPPRIK------VLDLHSN 431
Query: 342 QFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIP 396
+ + IP+++ +L+ LQ LN+ NQL F L+SL K+ L N P
Sbjct: 432 KIKS-IPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 18/177 (10%)
Query: 348 PEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGV--IPSSLGNLKQL 405
P ++S +L F N N L+ + + G+L+ L LIL N L + I +K L
Sbjct: 320 PSKISPFLHLDFSN---NLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSL 376
Query: 406 ALLHLFQNDLSGAIPEEIFNISHMSDSLNFARNHLVGSI----PPKIGNLKVLRMFVVSS 461
L + QN +S + + + SLN + N L +I PP+I KVL + S
Sbjct: 377 QQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRI---KVLDL---HS 430
Query: 462 NNLSGEIPSEIGSCFYLQEIYMAENFFRGSIPSSLVS-LKDLREIDLSQNNLSGKIP 517
N + IP ++ LQE+ +A N + S+P + L L++I L N P
Sbjct: 431 NKIKS-IPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 12/148 (8%)
Query: 238 LAFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGE--SDEMSFIHSLA 295
L + N +L +E+ KL + +NVA N SGE D+ +
Sbjct: 243 LKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEXQLINVACNRGISGEQLKDDWQALADAP 302
Query: 296 NCSNLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQ 355
+ + + N K P + + + K L +E +NQ EGK+P S ++
Sbjct: 303 VGEKIQIIYIGYNNLK-TFP-------VETSLQKXKKLGXLECLYNQLEGKLPAFGSEIK 354
Query: 356 NLQFLNMRHNQLSGEIPSSFGNLSSLVK 383
L LN+ +NQ++ EIP++F + V+
Sbjct: 355 -LASLNLAYNQIT-EIPANFCGFTEQVE 380
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 81 RLEALYLSHNSL-VGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENN 139
+++ +Y+ +N+L + +L +L L N+LEG +P+ F S L L + N
Sbjct: 306 KIQIIYIGYNNLKTFPVETSLQKXKKLGXLECLYNQLEGKLPA-FGSEIKLASLNLAYNQ 364
Query: 140 LTGGIPHFLGNITSLEAISLAYNSL 164
+T +F G +E +S A+N L
Sbjct: 365 ITEIPANFCGFTEQVENLSFAHNKL 389
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 26/174 (14%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDR-DGTIVAIKVLNLQLQGASKSF----AAECRAL 694
K D + LIG GSFG V K +DR + VAIK++ K+F E R L
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKA-YDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLL 104
Query: 695 RNI-RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN 753
+ +H ++ F + LV++ M + +L + L N R
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLL----------RNTNFRG 153
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDN--NLTAHVGDFG 805
++L A + +A+ +L + IHCDLKP NILL N + DFG
Sbjct: 154 VSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRXAIKIVDFG 206
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQSS 819
+ I AV ++H + P IH DLK N+LL N T + DFG A P+ S
Sbjct: 139 LKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWS 197
Query: 820 S 820
+
Sbjct: 198 A 198
>pdb|2XOT|A Chain A, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
pdb|2XOT|B Chain B, Crystal Structure Of Neuronal Leucine Rich Repeat Protein
Amigo-1
Length = 361
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%)
Query: 329 KLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGN 388
+L +L+ + + HN E + NL++L++ N L F +L +L L+L N
Sbjct: 62 RLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYN 121
Query: 389 NNLSGVIPSSLGNLKQLALLHLFQNDLS 416
N++ V ++ ++ QL L+L QN +S
Sbjct: 122 NHIVVVDRNAFEDMAQLQKLYLSQNQIS 149
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 15/74 (20%)
Query: 722 LVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASAVDYLHHHCQEPT 781
LV++ M GS+ + +H + R+ LE + DVASA+D+LH+ +
Sbjct: 88 LVFEKMRGGSILSHIH------------KRRHFNELEASVVVQDVASALDFLHN---KGI 132
Query: 782 IHCDLKPSNILLDN 795
H DLKP NIL ++
Sbjct: 133 AHRDLKPENILCEH 146
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 678 LQLQGASKSFAAECRALRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLH 737
+ ++ F E + + +I++ + +C I D ++Y+YM N
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCL----TCEGI-ITNYDEVYIIYEYMEN-------- 127
Query: 738 PDAIPQTDEENDEI-RNLTLLERISIAIDVASAV--DYLHHHCQEPTIHCDLKPSNILLD 794
D+I + DE + +N T I + + +V + + H ++ H D+KPSNIL+D
Sbjct: 128 -DSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD 186
Query: 795 NNLTAHVGDFG 805
N + DFG
Sbjct: 187 KNGRVKLSDFG 197
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA----AECRALRNIRHRNLVRVI 706
+G G+FG+V KG + + + V L+ + + AE ++ + + +VR+I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C + + LV + G L +L ++N +++ ++E + V
Sbjct: 73 GICEAESWM------LVMEMAELGPLNKYL---------QQNRHVKDKNIIELVH---QV 114
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YL + +H DL N+LL A + DFGL++
Sbjct: 115 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 153
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 35.4 bits (80), Expect = 0.13, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA----AECRALRNIRHRNLVRVI 706
+G G+FG+V KG + + + V L+ + + AE ++ + + +VR+I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C + + LV + G L +L ++N +++ ++E + V
Sbjct: 75 GICEAESWM------LVMEMAELGPLNKYL---------QQNRHVKDKNIIELVH---QV 116
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YL + +H DL N+LL A + DFGL++
Sbjct: 117 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 155
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 70/178 (39%), Gaps = 32/178 (17%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRN 701
+DG+ IG+GS+ + A+KV++ + S+ LR +H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPN 82
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
++ + + LV + M G L + + +R ER +
Sbjct: 83 IITLKDV-----YDDGKHVYLVTELMRGGELLDKI--------------LRQKFFSEREA 123
Query: 762 IAI--DVASAVDYLHHHCQEPTIHCDLKPSNILL----DNNLTAHVGDFGLAR-LRQE 812
+ + V+YLH + +H DLKPSNIL N + DFG A+ LR E
Sbjct: 124 SFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 321 GSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSS 380
GS S VS + + H + ++P+++ N+ LN+ HNQL ++F S
Sbjct: 4 GSASSTTKCTVSHEVADCSHLKL-TQVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQ 60
Query: 381 LVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLS 416
L L +G N +S + P L L +L+L N+LS
Sbjct: 61 LTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 96
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%)
Query: 34 VTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLV 93
+TVL+L L + S L + + NTI P +L L+ L L HN L
Sbjct: 37 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 96
Query: 94 GEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTG 142
++C+ L L+L N ++ + FV NL L + N L+
Sbjct: 97 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS 145
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 173/419 (41%), Gaps = 52/419 (12%)
Query: 30 RHRRVTVLDLKSKGLIGS-LSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFR--LEALY 86
+ + + LDL GL + L Q+ + L+E+ LSNN IQ E+ L+ L
Sbjct: 129 KQKNLITLDLSHNGLSSTKLGTQVQLEN-LQELLLSNNKIQALKSEELDIFANSSLKKLE 187
Query: 87 LSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEF-VSLYN--LKELAIQENNL-TG 142
LS N + PG RL GL+L +L S+ + + L N ++ L++ + L T
Sbjct: 188 LSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTT 247
Query: 143 GIPHFLG-NITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLANFS 201
FLG T+L + L+YN+L S L +L+ L +++ SL F+
Sbjct: 248 SNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFN 307
Query: 202 VPENRXXXXXXXXXXXXXXXXQL----FQ-----------------ISNNFFSGSFPLAF 240
V ++ FQ I +N F+G L +
Sbjct: 308 VRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKY 367
Query: 241 SNASN-LQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSN 299
+ SN SL L N F L+ L LN+ N + ESD S++ +
Sbjct: 368 LSLSNSFTSLRTLTNETFVSLA-----HSPLHILNLTKNKISKIESDAFSWL------GH 416
Query: 300 LSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQF 359
L L+L N+ L +G E L +++ I + +N++ + + +LQ
Sbjct: 417 LEVLDLGLNEIGQEL-----TG---QEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQR 468
Query: 360 LNMRHNQLSG--EIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLS 416
L +R L PS F L +L L L NNN++ + L L++L +L L N+L+
Sbjct: 469 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA 527
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 35.4 bits (80), Expect = 0.14, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 321 GSIPSEIGKLVS-LYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLS 379
S+P+ I LYL + + E P RL L L++ +NQL+ F L+
Sbjct: 22 ASVPTGIPTTTQVLYLYDNRITKLE---PGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT 78
Query: 380 SLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQN 413
L +L L +N L + + NL+ L + L N
Sbjct: 79 QLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNN 112
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 24/176 (13%)
Query: 635 YESLLKATDGFSSTHLIGIGSFGSVYKGTFD-RDGTIVAIKVLNLQLQGASKSFAAECRA 693
YE++ + ++ F IG G+F SVY T + G I + +L AAE +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 694 LRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN 753
L ++ V + C F+ ND + Y+ + E++L D + +
Sbjct: 73 LTVAGGQDNVMGVKYC----FRKNDHVVIAMPYLEH---ESFL------------DILNS 113
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAH-VGDFGLAR 808
L+ E +++ A+ +H Q +H D+KPSN L + L + + DFGLA+
Sbjct: 114 LSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 22/140 (15%)
Query: 292 HSLANCS-------------NLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEM 338
H +A+CS N++ LNL NQ + LP + + L +++
Sbjct: 11 HEVADCSHLKLTQVPDDLPTNITVLNLTHNQLR-RLP--------AANFTRYSQLTSLDV 61
Query: 339 DHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSS 398
N PE +L L+ LN++HN+LS +F ++L +L L +N++ + +
Sbjct: 62 GFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNP 121
Query: 399 LGNLKQLALLHLFQNDLSGA 418
K L L L N LS
Sbjct: 122 FVKQKNLITLDLSHNGLSST 141
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%)
Query: 34 VTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLV 93
+TVL+L L + S L + + NTI P +L L+ L L HN L
Sbjct: 32 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 91
Query: 94 GEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTG 142
++C+ L L+L N ++ + FV NL L + N L+
Sbjct: 92 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS 140
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 173/419 (41%), Gaps = 52/419 (12%)
Query: 30 RHRRVTVLDLKSKGLIGS-LSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFR--LEALY 86
+ + + LDL GL + L Q+ + L+E+ LSNN IQ E+ L+ L
Sbjct: 124 KQKNLITLDLSHNGLSSTKLGTQVQLEN-LQELLLSNNKIQALKSEELDIFANSSLKKLE 182
Query: 87 LSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEF-VSLYN--LKELAIQENNL-TG 142
LS N + PG RL GL+L +L S+ + + L N ++ L++ + L T
Sbjct: 183 LSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTT 242
Query: 143 GIPHFLG-NITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLANFS 201
FLG T+L + L+YN+L S L +L+ L +++ SL F+
Sbjct: 243 SNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFN 302
Query: 202 VPENRXXXXXXXXXXXXXXXXQL----FQ-----------------ISNNFFSGSFPLAF 240
V ++ FQ I +N F+G L +
Sbjct: 303 VRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKY 362
Query: 241 SNASN-LQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSN 299
+ SN SL L N F L+ L LN+ N + ESD S++ +
Sbjct: 363 LSLSNSFTSLRTLTNETFVSLA-----HSPLHILNLTKNKISKIESDAFSWL------GH 411
Query: 300 LSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQF 359
L L+L N+ L +G E L +++ I + +N++ + + +LQ
Sbjct: 412 LEVLDLGLNEIGQEL-----TG---QEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQR 463
Query: 360 LNMRHNQLSG--EIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLS 416
L +R L PS F L +L L L NNN++ + L L++L +L L N+L+
Sbjct: 464 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA 522
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 70/178 (39%), Gaps = 32/178 (17%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRN 701
+DG+ IG+GS+ + A+KV++ + S+ LR +H N
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPN 82
Query: 702 LVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERIS 761
++ + + LV + M G L + + +R ER +
Sbjct: 83 IITLKDV-----YDDGKHVYLVTELMRGGELLDKI--------------LRQKFFSEREA 123
Query: 762 --IAIDVASAVDYLHHHCQEPTIHCDLKPSNILL----DNNLTAHVGDFGLAR-LRQE 812
+ + V+YLH + +H DLKPSNIL N + DFG A+ LR E
Sbjct: 124 SFVLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAE 178
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 758 ERI--SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA-RLRQEVP 814
ERI + + + A+ YL + IH D+KPSNILLD + DFG++ RL +
Sbjct: 123 ERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180
Query: 815 NNQSS 819
++S+
Sbjct: 181 KDRSA 185
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 22/140 (15%)
Query: 292 HSLANCS-------------NLSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEM 338
H +A+CS N++ LNL NQ + LP + + L +++
Sbjct: 6 HEVADCSHLKLTQVPDDLPTNITVLNLTHNQLR-RLP--------AANFTRYSQLTSLDV 56
Query: 339 DHNQFEGKIPEEMSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSS 398
N PE +L L+ LN++HN+LS +F ++L +L L +N++ + +
Sbjct: 57 GFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNP 116
Query: 399 LGNLKQLALLHLFQNDLSGA 418
K L L L N LS
Sbjct: 117 FVKQKNLITLDLSHNGLSST 136
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%)
Query: 34 VTVLDLKSKGLIGSLSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLV 93
+TVL+L L + S L + + NTI P +L L+ L L HN L
Sbjct: 27 ITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELS 86
Query: 94 GEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVSLYNLKELAIQENNLTG 142
++C+ L L+L N ++ + FV NL L + N L+
Sbjct: 87 QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSS 135
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 173/419 (41%), Gaps = 52/419 (12%)
Query: 30 RHRRVTVLDLKSKGLIGS-LSPQIGNLSFLREIHLSNNTIQGKIPGEIGRLFR--LEALY 86
+ + + LDL GL + L Q+ + L+E+ LSNN IQ E+ L+ L
Sbjct: 119 KQKNLITLDLSHNGLSSTKLGTQVQLEN-LQELLLSNNKIQALKSEELDIFANSSLKKLE 177
Query: 87 LSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEF-VSLYN--LKELAIQENNL-TG 142
LS N + PG RL GL+L +L S+ + + L N ++ L++ + L T
Sbjct: 178 LSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTT 237
Query: 143 GIPHFLG-NITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGTIPPSIYNLSLLANFS 201
FLG T+L + L+YN+L S L +L+ L +++ SL F+
Sbjct: 238 SNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFN 297
Query: 202 VPENRXXXXXXXXXXXXXXXXQL----FQ-----------------ISNNFFSGSFPLAF 240
V ++ FQ I +N F+G L +
Sbjct: 298 VRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKY 357
Query: 241 SNASN-LQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSN 299
+ SN SL L N F L+ L LN+ N + ESD S++ +
Sbjct: 358 LSLSNSFTSLRTLTNETFVSLA-----HSPLHILNLTKNKISKIESDAFSWL------GH 406
Query: 300 LSFLNLVANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQF 359
L L+L N+ L +G E L +++ I + +N++ + + +LQ
Sbjct: 407 LEVLDLGLNEIGQEL-----TG---QEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQR 458
Query: 360 LNMRHNQLSG--EIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLS 416
L +R L PS F L +L L L NNN++ + L L++L +L L N+L+
Sbjct: 459 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLA 517
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 33/167 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
IG G++GSV K G I+A+K + +S E + + ++V + C
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI--------RSTVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 711 SI-DFQGNDFK---ALVYQYMPNGSLENWLH------PDAIPQTDEENDEIRNLTLLERI 760
I F G F+ + + + S + + D IP+ +L +I
Sbjct: 82 YIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEE-----------ILGKI 130
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
++A A+++L + + IH D+KPSNILLD + + DFG++
Sbjct: 131 TLA--TVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 34/167 (20%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHR---NLVRVI 706
+IG GSFG V K + VA+K++ + + + A E R L ++R + N + VI
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 707 TSCSSIDFQGN---DFKAL---VYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
+ F+ + F+ L +Y+ + + + +L L+ +
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGF-----------------SLPLVRKF 205
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA--HVGDFG 805
+ +I +D LH + IHCDLKP NILL + V DFG
Sbjct: 206 AHSI--LQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 52 IGNLSFLREIHLSNNTIQG-KIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLY 110
IG+L L+E+++++N IQ K+P L LE L LS N + YC+ L L+
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS------IYCTDLRVLH 175
Query: 111 ----LGRNKLEGSIPSEFVSL-----YNLKELAIQENNLTGGIPHFLGNITSLEAISLAY 161
L + P F+ LKELA+ N L +TSL+ I L
Sbjct: 176 QMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 235
Query: 162 NSLGGNIP 169
N + P
Sbjct: 236 NPWDCSCP 243
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCS 298
AFS S+LQ L + N + G +K+L LNVA N + S + E +N +
Sbjct: 97 AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY-----FSNLT 151
Query: 299 NLSFLNLVANQFKG 312
NL L+L +N+ +
Sbjct: 152 NLEHLDLSSNKIQS 165
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 26/163 (15%)
Query: 634 SYESLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRA 693
+E + K T + L+G G++ V ++G A+K++ Q + E
Sbjct: 9 KFEDMYKLT-----SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVET 63
Query: 694 LRNIR-HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIR 752
L + ++N++ +I F+ + LV++ + GS+ + +
Sbjct: 64 LYQCQGNKNILELIEF-----FEDDTRFYLVFEKLQGGSILAHIQKQ------------K 106
Query: 753 NLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDN 795
+ E + DVA+A+D+LH + H DLKP NIL ++
Sbjct: 107 HFNEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCES 146
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 639 LKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIR 698
++ TDG+ IG+GS+ + A+K+++ + ++ LR +
Sbjct: 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI---LLRYGQ 74
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLE 758
H N++ + + + +V + G L + + +R E
Sbjct: 75 HPNIITLKDV-----YDDGKYVYVVTELXKGGELLDKI--------------LRQKFFSE 115
Query: 759 RISIAI--DVASAVDYLHHHCQEPTIHCDLKPSNILL----DNNLTAHVGDFGLAR-LRQ 811
R + A+ + V+YLH + +H DLKPSNIL N + + DFG A+ LR
Sbjct: 116 REASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
Query: 812 E 812
E
Sbjct: 173 E 173
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 52 IGNLSFLREIHLSNNTIQG-KIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLY 110
IG+L L+E+++++N IQ K+P L LE L LS N + YC+ L L+
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS------IYCTDLRVLH 174
Query: 111 ----LGRNKLEGSIPSEFVSL-----YNLKELAIQENNLTGGIPHFLGNITSLEAISLAY 161
L + P F+ LKELA+ N L +TSL+ I L
Sbjct: 175 QMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 234
Query: 162 NSLGGNIP 169
N + P
Sbjct: 235 NPWDCSCP 242
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCS 298
AFS S+LQ L + N + G +K+L LNVA N + S + E +N +
Sbjct: 96 AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY-----FSNLT 150
Query: 299 NLSFLNLVANQFKG 312
NL L+L +N+ +
Sbjct: 151 NLEHLDLSSNKIQS 164
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 17/162 (10%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVR 704
F +G GS+G V+K DG + A+K +G R L + V
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD----RARKLAEVGSHEKVG 114
Query: 705 VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAI 764
C ++ Q + ++Y L + + +++ E +L E
Sbjct: 115 QHPCCVRLE-QAWEEGGILY-----------LQTELCGPSLQQHCEAWGASLPEAQVWGY 162
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGL 806
+ + H H Q +H D+KP+NI L +GDFGL
Sbjct: 163 LRDTLLALAHLHSQG-LVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 30/175 (17%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK------SFAAECRALRN 696
D + +G G F V K G A K + + +S+ E LR
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
IRH N++ + I F+ L+ + + G L ++L E +LT
Sbjct: 65 IRHPNII----TLHDI-FENKTDVVLILELVSGGELFDFLA------------EKESLTE 107
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI-LLDNNL---TAHVGDFGLA 807
E + V YLH + H DLKP NI LLD N+ + DFG+A
Sbjct: 108 DEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 70/178 (39%), Gaps = 30/178 (16%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK------SFAAECRA 693
K D + +G G F V K G A K + + AS+ E
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 694 LRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN 753
LR + H N++ + ++ L+ + + G L ++L Q + ++E
Sbjct: 69 LRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL-----AQKESLSEE--- 115
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI-LLDNNL-TAHVG--DFGLA 807
E S + V+YLH + H DLKP NI LLD N+ H+ DFGLA
Sbjct: 116 ----EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 34/167 (20%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHR---NLVRVI 706
+IG GSFG V K + VA+K++ + + + A E R L ++R + N + VI
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 707 TSCSSIDFQGN---DFKAL---VYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
+ F+ + F+ L +Y+ + + + +L L+ +
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGF-----------------SLPLVRKF 205
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA--HVGDFG 805
+ +I +D LH + IHCDLKP NILL + V DFG
Sbjct: 206 AHSI--LQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA----AECRALRNIRHRNLVRVI 706
+G G+FG+V KG + + + V L+ + + AE ++ + + +VR+I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C + + LV + G L +L ++N +++ ++E + V
Sbjct: 437 GICEAESWM------LVMEMAELGPLNKYL---------QQNRHVKDKNIIELVH---QV 478
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YL + +H DL N+LL A + DFGL++
Sbjct: 479 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 517
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 132/354 (37%), Gaps = 83/354 (23%)
Query: 67 TIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLGRNKLEGSIPSEFVS 126
+IQG I L LE L L+ N + P LS +L LY+G NK+ S +
Sbjct: 58 SIQG-----IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD--ISALQN 108
Query: 127 LYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSLGGNIPSSLGQLKELKSLGLGGT 186
L NL+EL + E+N++ P L L + SL LG
Sbjct: 109 LTNLRELYLNEDNISDISP--------------------------LANLTKXYSLNLGAN 142
Query: 187 IPPSIYNLSLLANFSVPENRXXXXXXXXXXXXXXXXQLFQISNNFFSGSFPLAFSNASNL 246
+NLS L+ S ++ + P+A N ++L
Sbjct: 143 -----HNLSDLSPLS----------------NXTGLNYLTVTESKVKDVTPIA--NLTDL 179
Query: 247 QSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCSNLSFLNLV 306
SL L N +S + SL Y +N +++ I +AN + L+ L +
Sbjct: 180 YSLS-LNYNQIEDISP-LASLTSLHYFTAYVN--------QITDITPVANXTRLNSLKIG 229
Query: 307 ANQFKGALPHSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEEMSRLQNLQFLNMRHNQ 366
N+ P + L L +E+ NQ + L L+ LN+ NQ
Sbjct: 230 NNKITDLSP-----------LANLSQLTWLEIGTNQISD--INAVKDLTKLKXLNVGSNQ 276
Query: 367 LSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHLFQNDLSGAIP 420
+S S NLS L L L NN L +G L L L L QN ++ P
Sbjct: 277 ISD--ISVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRP 328
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 70/178 (39%), Gaps = 30/178 (16%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK------SFAAECRA 693
K D + +G G F V K G A K + + AS+ E
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 694 LRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN 753
LR + H N++ + ++ L+ + + G L ++L Q + ++E
Sbjct: 69 LRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL-----AQKESLSEE--- 115
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI-LLDNNL-TAHVG--DFGLA 807
E S + V+YLH + H DLKP NI LLD N+ H+ DFGLA
Sbjct: 116 ----EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 52 IGNLSFLREIHLSNNTIQG-KIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLY 110
IG+L L+E+++++N IQ K+P L LE L LS N + YC+ L L+
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS------IYCTDLRVLH 173
Query: 111 ----LGRNKLEGSIPSEFVSL-----YNLKELAIQENNLTGGIPHFLGNITSLEAISLAY 161
L + P F+ LKELA+ N L +TSL+ I L
Sbjct: 174 QMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 233
Query: 162 NSLGGNIP 169
N + P
Sbjct: 234 NPWDCSCP 241
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCS 298
AFS S+LQ L + N + G +K+L LNVA N + S + E +N +
Sbjct: 95 AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY-----FSNLT 149
Query: 299 NLSFLNLVANQFKG 312
NL L+L +N+ +
Sbjct: 150 NLEHLDLSSNKIQS 163
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 52 IGNLSFLREIHLSNNTIQG-KIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLY 110
IG+L L+E+++++N IQ K+P L LE L LS N + YC+ L L+
Sbjct: 121 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS------IYCTDLRVLH 174
Query: 111 ----LGRNKLEGSIPSEFVSL-----YNLKELAIQENNLTGGIPHFLGNITSLEAISLAY 161
L + P F+ LKELA+ N L +TSL+ I L
Sbjct: 175 QMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 234
Query: 162 NSLGGNIP 169
N + P
Sbjct: 235 NPWDCSCP 242
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCS 298
AFS S+LQ L + N + G +K+L LNVA N + S + E +N +
Sbjct: 96 AFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY-----FSNLT 150
Query: 299 NLSFLNLVANQFKG 312
NL L+L +N+ +
Sbjct: 151 NLEHLDLSSNKIQS 164
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDR-DGTIVAIKVLNLQLQGASKSF----AAECRAL 694
K D + LIG GSFG V K +DR + VAIK++ K+F E R L
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKA-YDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLL 104
Query: 695 RNI-RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN 753
+ +H ++ F + LV++ M + +L + L N R
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLL----------RNTNFRG 153
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVG--DFG 805
++L A + +A+ +L + IHCDLKP NILL N + + DFG
Sbjct: 154 VSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFG 206
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 30/175 (17%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK------SFAAECRALRN 696
D + +G G F V K G A K + + +S+ E LR
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
IRH N++ + I F+ L+ + + G L ++L E +LT
Sbjct: 72 IRHPNII----TLHDI-FENKTDVVLILELVSGGELFDFLA------------EKESLTE 114
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI-LLDNNL---TAHVGDFGLA 807
E + V YLH + H DLKP NI LLD N+ + DFG+A
Sbjct: 115 DEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 32/176 (18%)
Query: 643 DGFSSTHLIGIGSFGSVY---KGTFDRDGTIVAIKVLN----LQLQGASKSFAAECRALR 695
+ F ++G G++G V+ K + G + A+KVL +Q ++ E + L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 696 NIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLT 755
+IR + + FQ L+ Y+ G L +L+
Sbjct: 114 HIRQSPFLVTLHYA----FQTETKLHLILDYINGGEL------------------FTHLS 151
Query: 756 LLERIS---IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
ER + + I V V L H + I+ D+K NILLD+N + DFGL++
Sbjct: 152 QRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 70/178 (39%), Gaps = 30/178 (16%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK------SFAAECRA 693
K D + +G G F V K G A K + + AS+ E
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 694 LRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN 753
LR + H N++ + ++ L+ + + G L ++L Q + ++E
Sbjct: 69 LRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL-----AQKESLSEE--- 115
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI-LLDNNL-TAHVG--DFGLA 807
E S + V+YLH + H DLKP NI LLD N+ H+ DFGLA
Sbjct: 116 ----EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA----AECRALRNIRHRNLVRVI 706
+G G+FG+V KG + + + V L+ + + AE ++ + + +VR+I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C + + LV + G L +L ++N +++ ++E + V
Sbjct: 438 GICEAESWM------LVMEMAELGPLNKYL---------QQNRHVKDKNIIELVH---QV 479
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YL + +H DL N+LL A + DFGL++
Sbjct: 480 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 518
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 52 IGNLSFLREIHLSNNTIQG-KIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLY 110
IG+L L+E+++++N IQ K+P L LE L LS N + YC+ L L+
Sbjct: 122 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS------IYCTDLRVLH 175
Query: 111 ----LGRNKLEGSIPSEFVSL-----YNLKELAIQENNLTGGIPHFLGNITSLEAISLAY 161
L + P F+ LKELA+ N L +TSL+ I L
Sbjct: 176 QMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 235
Query: 162 NSLGGNIP 169
N + P
Sbjct: 236 NPWDCSCP 243
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 239 AFSNASNLQSLEILGNNFFGKLSVNFGDMKSLAYLNVAINNLGSGESDEMSFIHSLANCS 298
AFS S+LQ L L N + G +K+L LNVA N + S + E +N +
Sbjct: 97 AFSGLSSLQKLVALETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY-----FSNLT 151
Query: 299 NLSFLNLVANQFKG 312
NL L+L +N+ +
Sbjct: 152 NLEHLDLSSNKIQS 165
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 34.7 bits (78), Expect = 0.21, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 68/163 (41%), Gaps = 31/163 (19%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G++G V VA+K+++++ A +C NI+ + + +
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-------AVDCP--ENIKKEICINAMLNHE 65
Query: 711 SI-DFQGN----DFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLERISIAI 764
++ F G+ + + L +Y G L + + PD +P+ D +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR-------------FFH 112
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 113 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 30/175 (17%)
Query: 643 DGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK------SFAAECRALRN 696
D + +G G F V K G A K + + +S+ E LR
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 697 IRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTL 756
IRH N++ + I F+ L+ + + G L ++L E +LT
Sbjct: 86 IRHPNII----TLHDI-FENKTDVVLILELVSGGELFDFLA------------EKESLTE 128
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI-LLDNNL---TAHVGDFGLA 807
E + V YLH + H DLKP NI LLD N+ + DFG+A
Sbjct: 129 DEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 32/175 (18%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN---LQLQGASKSFAAECRALRNIR 698
+D + +G G++G V G AIK++ + S + E L+ +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEI---RNLT 755
H N++++ F+ LV + G L DEI + +
Sbjct: 80 HPNIMKLYEF-----FEDKRNYYLVMEVYRGGEL---------------FDEIILRQKFS 119
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDN---NLTAHVGDFGLA 807
++ I V S YLH H +H DLKP N+LL++ + + DFGL+
Sbjct: 120 EVDAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQS 818
+ A ++ ++ LH +E ++ DLKP NILLD++ + D GLA VP Q+
Sbjct: 289 VFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA---VHVPEGQT 341
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 70/178 (39%), Gaps = 30/178 (16%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK------SFAAECRA 693
K D + +G G F V K G A K + + AS+ E
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 694 LRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN 753
LR + H N++ + ++ L+ + + G L ++L Q + ++E
Sbjct: 69 LRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFL-----AQKESLSEE--- 115
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI-LLDNNL-TAHVG--DFGLA 807
E S + V+YLH + H DLKP NI LLD N+ H+ DFGLA
Sbjct: 116 ----EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQEVPNNQS 818
+ A ++ ++ LH +E ++ DLKP NILLD++ + D GLA VP Q+
Sbjct: 289 VFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA---VHVPEGQT 341
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 69/178 (38%), Gaps = 30/178 (16%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK------SFAAECRA 693
K D + +G G F V K G A K + + AS+ E
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 694 LRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN 753
LR + H N++ + ++ L+ + + G L ++L + +
Sbjct: 69 LRQVLHHNVITLHDV-----YENRTDVVLILELVSGGELFDFLA------------QKES 111
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI-LLDNNL-TAHVG--DFGLA 807
L+ E S + V+YLH + H DLKP NI LLD N+ H+ DFGLA
Sbjct: 112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 44/177 (24%)
Query: 645 FSSTHLIGIGSFGS-VYKGTFD-RDGTIVAIKVLNLQLQGASKSFA-AECRALR-NIRHR 700
F ++G G+ G+ VY+G FD RD VA+K ++ SFA E + LR + H
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRD---VAVK----RILPECFSFADREVQLLRESDEHP 78
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMP----NGSLENWLHPDAIPQTDEENDEIRNLTL 756
N++R C+ D Q +QY+ +L+ + + Q D + + +TL
Sbjct: 79 NVIRYF--CTEKDRQ--------FQYIAIELCAATLQEY-----VEQKDFAHLGLEPITL 123
Query: 757 LERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLD-----NNLTAHVGDFGLAR 808
L++ + S + +LH +H DLKP NIL+ + A + DFGL +
Sbjct: 124 LQQTT------SGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDR-DGTIVAIKVLNLQLQGASKSF----AAECRAL 694
K D + LIG GSFG V K +DR + VAIK++ K+F E R L
Sbjct: 32 KWMDRYEIDSLIGKGSFGQVVKA-YDRVEQEWVAIKIIK-----NKKAFLNQAQIEVRLL 85
Query: 695 RNI-RHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN 753
+ +H ++ F + LV++ M + +L + L N R
Sbjct: 86 ELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLL----------RNTNFRG 134
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVG--DFG 805
++L A + +A+ +L + IHCDLKP NILL N + + DFG
Sbjct: 135 VSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 187
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 41/176 (23%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK-----SFAAECRALRNIRHRNLVR 704
++G GSFG V K A+KV+N + ++K + E L+ + H N+++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 705 ---VITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDE--ENDEIRNLTLLER 759
++ SS +V + G L D I + E+D R
Sbjct: 86 LFEILEDSSSF--------YIVGELYTGGEL-----FDEIIKRKRFSEHDAAR------- 125
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDN---NLTAHVGDFGLARLRQE 812
I V S + Y+H H +H DLKP NILL++ + + DFGL+ Q+
Sbjct: 126 --IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 14/81 (17%)
Query: 752 RNLTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILL-----DNNLTAHVGDFGL 806
R TL + IAI + S ++Y+H + I+ D+KP N L+ H+ DFGL
Sbjct: 92 RTFTLKTVLMIAIQLLSRMEYVH---SKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGL 148
Query: 807 AR------LRQEVPNNQSSSV 821
A+ ++ +P + S+
Sbjct: 149 AKEYIDPETKKHIPYREHKSL 169
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA----AECRALRNIRHRNLVRVI 706
+G G+FG+V KG + + + V L+ + + AE ++ + + +VR+I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C + + LV + G L +L ++N +++ ++E + V
Sbjct: 79 GICEAESWM------LVMEMAELGPLNKYL---------QQNRHVKDKNIIELVH---QV 120
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YL + +H DL N+LL A + DFGL++
Sbjct: 121 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 159
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++A A+D+LH I+ DLKP NILLD + DFGL++
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++A A+D+LH I+ DLKP NILLD + DFGL++
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK 175
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA----AECRALRNIRHRNLVRVI 706
+G G+FG+V KG + + + V L+ + + AE ++ + + +VR+I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C + + LV + G L +L ++N +++ ++E + V
Sbjct: 93 GICEAESWM------LVMEMAELGPLNKYL---------QQNRHVKDKNIIELVH---QV 134
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YL + +H DL N+LL A + DFGL++
Sbjct: 135 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 173
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA----AECRALRNIRHRNLVRVI 706
+G G+FG+V KG + + + V L+ + + AE ++ + + +VR+I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C + + LV + G L +L ++N +++ ++E + V
Sbjct: 79 GICEAESWM------LVMEMAELGPLNKYL---------QQNRHVKDKNIIELVH---QV 120
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YL + +H DL N+LL A + DFGL++
Sbjct: 121 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 159
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 765 DVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
++A A+D+LH I+ DLKP NILLD + DFGL++
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA----AECRALRNIRHRNLVRVI 706
+G G+FG+V KG + + + V L+ + + AE ++ + + +VR+I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C + + LV + G L +L ++N +++ ++E + V
Sbjct: 85 GICEAESWM------LVMEMAELGPLNKYL---------QQNRHVKDKNIIELVH---QV 126
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YL + +H DL N+LL A + DFGL++
Sbjct: 127 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 165
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 749 DEIRNLTLLERISIAI---DVASAVDYLHHHCQEPTIHCDLKPSNILLDN---NLTAHVG 802
DEI + + A+ V S V YLH H +H DLKP N+LL++ + +
Sbjct: 125 DEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIV 181
Query: 803 DFGLA 807
DFGL+
Sbjct: 182 DFGLS 186
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 768 SAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
V YLH++ IH DLK N+ L++++ +GDFGLA
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA----AECRALRNIRHRNLVRVI 706
+G G+FG+V KG + + + V L+ + + AE ++ + + +VR+I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C + + LV + G L +L ++N +++ ++E + V
Sbjct: 95 GICEAESWM------LVMEMAELGPLNKYL---------QQNRHVKDKNIIELVH---QV 136
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YL + +H DL N+LL A + DFGL++
Sbjct: 137 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 175
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 25/162 (15%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFA----AECRALRNIRHRNLVRVI 706
+G G+FG+V KG + + + V L+ + + AE ++ + + +VR+I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 707 TSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDV 766
C + + LV + G L +L ++N +++ ++E + V
Sbjct: 95 GICEAESWM------LVMEMAELGPLNKYL---------QQNRHVKDKNIIELVH---QV 136
Query: 767 ASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
+ + YL + +H DL N+LL A + DFGL++
Sbjct: 137 SMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 175
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
V YLH++ IH DLK N+ L++++ +GDFGLA
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
V YLH++ IH DLK N+ L++++ +GDFGLA
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 30/192 (15%)
Query: 637 SLLKATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRAL 694
+ + T+ + +G G+F V + G A ++N + A + E R
Sbjct: 5 TCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARIC 64
Query: 695 RNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSL-ENWLHPDAIPQTDEENDEIRN 753
R ++H N+VR+ S S +G+ + L++ + G L E+ + + + D +
Sbjct: 65 RLLKHPNIVRLHDSISE---EGHHY--LIFDLVTGGELFEDIVAREYYSEADASH----- 114
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNL---TAHVGDFGLARLR 810
+++I A+ LH H Q +H +LKP N+LL + L + DFGLA
Sbjct: 115 --CIQQILEAV--------LHCH-QMGVVHRNLKPENLLLASKLKGAAVKLADFGLA--- 160
Query: 811 QEVPNNQSSSVG 822
EV Q + G
Sbjct: 161 IEVEGEQQAWFG 172
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 770 VDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
V YLH++ IH DLK N+ L++++ +GDFGLA
Sbjct: 155 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 762 IAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
IA+ + A+++LH IH D+KPSN+L++ + DFG++
Sbjct: 158 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 70/178 (39%), Gaps = 30/178 (16%)
Query: 640 KATDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASK------SFAAECRA 693
K D + +G G F V K G A K + + AS+ E
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 694 LRNIRHRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEIRN 753
LR + H N++ + ++ L+ + + G L ++L Q + ++E
Sbjct: 69 LRQVLHPNIITLHDV-----YENRTDVVLILELVSGGELFDFL-----AQKESLSEE--- 115
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNI-LLDNNL-TAHVG--DFGLA 807
E S + V+YLH + H DLKP NI LLD N+ H+ DFGLA
Sbjct: 116 ----EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 23/168 (13%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQ-GASKSFAAECRALRNIRHR 700
+ + +G G+ G V VA+K+++++ ++ E + + H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 701 NLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPD-AIPQTDEENDEIRNLTLLER 759
N+V+ +GN + L +Y G L + + PD +P+ D +
Sbjct: 65 NVVKFYGHRR----EGN-IQYLFLEYCSGGELFDRIEPDIGMPEPDAQR----------- 108
Query: 760 ISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
+ + V YLH H D+KP N+LLD + DFGLA
Sbjct: 109 --FFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDN---NLTAHVGDFGLARLRQE 812
V S + Y+H H +H DLKP NILL++ + + DFGL+ Q+
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDN---NLTAHVGDFGLARLRQE 812
V S + Y+H H +H DLKP NILL++ + + DFGL+ Q+
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 32/175 (18%)
Query: 642 TDGFSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLN---LQLQGASKSFAAECRALRNIR 698
+D + +G G++G V G AIK++ + S + E L+ +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 699 HRNLVRVITSCSSIDFQGNDFKALVYQYMPNGSLENWLHPDAIPQTDEENDEI---RNLT 755
H N++++ F+ LV + G L DEI + +
Sbjct: 63 HPNIMKLYEF-----FEDKRNYYLVMEVYRGGEL---------------FDEIILRQKFS 102
Query: 756 LLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDN---NLTAHVGDFGLA 807
++ I V S YLH H +H DLKP N+LL++ + + DFGL+
Sbjct: 103 EVDAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
LTL I + VA +++L IH DL NILL + DFGLAR
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 239
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
LTL I + VA +++L IH DL NILL + DFGLAR
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 31/173 (17%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNIRHRN- 701
+S IG G V++ + I AIK +NL+ S+ E L ++ +
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 702 -LVRVITSCSSIDFQGNDFKALVYQYMPNGSLE--NWLHPDAIPQTDEENDEIRNLTLLE 758
++R+ D++ D +Y M G+++ +WL +++ E
Sbjct: 70 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWLKKK------------KSIDPWE 109
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQ 811
R S ++ AV +H H +H DLKP+N L+ + + + DFG+A Q
Sbjct: 110 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQ 158
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNIRHRN- 701
+S IG G V++ + I AIK +NL+ S+ E L ++ +
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 702 -LVRVITSCSSIDFQGNDFKALVYQYMPNGSLE--NWLHPDAIPQTDEENDEIRNLTLLE 758
++R+ D++ D +Y M G+++ +WL + +++ E
Sbjct: 73 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWLK------------KKKSIDPWE 112
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQ 811
R S ++ AV +H H +H DLKP+N L+ + + + DFG+A Q
Sbjct: 113 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQ 161
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
IA+ + A+++LH IH D+KPSN+L++ + DFG++
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
LTL I + VA +++L IH DL NILL + DFGLAR
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 246
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 754 LTLLERISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLAR 808
LTL I + VA +++L IH DL NILL + DFGLAR
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 248
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNIRHRN- 701
+S IG G V++ + I AIK +NL+ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 702 -LVRVITSCSSIDFQGNDFKALVYQYMPNGSLE--NWLHPDAIPQTDEENDEIRNLTLLE 758
++R+ D++ D +Y M G+++ +WL + +++ E
Sbjct: 117 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWLK------------KKKSIDPWE 156
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQ 811
R S ++ AV +H H +H DLKP+N L+ + + + DFG+A Q
Sbjct: 157 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQ 205
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 650 LIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHR---NLVRVI 706
+IG G FG V K + VA+K++ + + + A E R L ++R + N + VI
Sbjct: 104 VIGKGXFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 707 TSCSSIDFQGN---DFKAL---VYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERI 760
+ F+ + F+ L +Y+ + + + +L L+ +
Sbjct: 163 HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGF-----------------SLPLVRKF 205
Query: 761 SIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTA--HVGDFG 805
+ +I +D LH + IHCDLKP NILL + V DFG
Sbjct: 206 AHSI--LQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNIRHRN- 701
+S IG G V++ + I AIK +NL+ S+ E L ++ +
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 702 -LVRVITSCSSIDFQGNDFKALVYQYMPNGSLE--NWLHPDAIPQTDEENDEIRNLTLLE 758
++R+ D++ D +Y M G+++ +WL + +++ E
Sbjct: 117 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWLK------------KKKSIDPWE 156
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQ 811
R S ++ AV +H H +H DLKP+N L+ + + + DFG+A Q
Sbjct: 157 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQ 205
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 53 GNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLG 112
G L L + LS+N +Q +P L L L +S N L G L L LYL
Sbjct: 75 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 133
Query: 113 RNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSL 164
N+L+ P L++L++ NNLT L + +L+ + L NSL
Sbjct: 134 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 185
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 63/149 (42%), Gaps = 14/149 (9%)
Query: 299 NLSFLNLVANQFKGALP--------HSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEE 350
NL L Q G LP H+ + S+P L +L ++++ N+
Sbjct: 62 NLDRCELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGA 120
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHL 410
+ L LQ L ++ N+L P L KL L NNNL+ + L L+ L L L
Sbjct: 121 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLL 180
Query: 411 FQNDLSGAIPEEIFNISHMSDSLNFARNH 439
+N L IP+ F SH+ L FA H
Sbjct: 181 QENSLY-TIPKGFFG-SHL---LPFAFLH 204
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 39 LKSKGLIGSLSPQIG--NLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEI 96
L+S L+G P + ++SF R L ++G L L+ LYL N L
Sbjct: 90 LQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRG--------LGELQELYLKGNELKTLP 141
Query: 97 PGNLSYCSRLIGLYLGRNKLEGSIPSEFVS-LYNLKELAIQENNL 140
PG L+ +L L L N L +P+ ++ L NL L +QEN+L
Sbjct: 142 PGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 185
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 33.1 bits (74), Expect = 0.59, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 53 GNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLG 112
G L L + LS+N +Q +P L L L +S N L G L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 113 RNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSL 164
N+L+ P L++L++ N LT L + +L+ + L NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 39 LKSKGLIGSLSPQIG--NLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEI 96
L+S L+G P + ++SF R L ++G L L+ LYL N L
Sbjct: 89 LQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRG--------LGELQELYLKGNELKTLP 140
Query: 97 PGNLSYCSRLIGLYLGRNKLEGSIPSEFVS-LYNLKELAIQENNL 140
PG L+ +L L L N+L +P+ ++ L NL L +QEN+L
Sbjct: 141 PGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSL 184
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 299 NLSFLNLVANQFKGALP--------HSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEE 350
NL L Q G LP H+ + S+P L +L ++++ N+
Sbjct: 61 NLDRCELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHL 410
+ L LQ L ++ N+L P L KL L NN L+ + L L+ L L L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLL 179
Query: 411 FQNDLSGAIPEEIFNISHM 429
+N L IP+ F SH+
Sbjct: 180 QENSLY-TIPKGFFG-SHL 196
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 53 GNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLG 112
G L L + LS+N +Q +P L L L +S N L G L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 113 RNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSL 164
N+L+ P L++L++ NNLT L + +L+ + L NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 63/149 (42%), Gaps = 14/149 (9%)
Query: 299 NLSFLNLVANQFKGALP--------HSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEE 350
NL L Q G LP H+ + S+P L +L ++++ N+
Sbjct: 61 NLDRAELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHL 410
+ L LQ L ++ N+L P L KL L NNNL+ + L L+ L L L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLL 179
Query: 411 FQNDLSGAIPEEIFNISHMSDSLNFARNH 439
+N L IP+ F SH+ L FA H
Sbjct: 180 QENSLY-TIPKGFFG-SHL---LPFAFLH 203
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 39 LKSKGLIGSLSPQIG--NLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEI 96
L+S L+G P + ++SF R L ++G L L+ LYL N L
Sbjct: 89 LQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRG--------LGELQELYLKGNELKTLP 140
Query: 97 PGNLSYCSRLIGLYLGRNKLEGSIPSEFVS-LYNLKELAIQENNL 140
PG L+ +L L L N L +P+ ++ L NL L +QEN+L
Sbjct: 141 PGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 184
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 53 GNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLG 112
G L L + LS+N +Q +P L L L +S N L G L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 113 RNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSL 164
N+L+ P L++L++ NNLT L + +L+ + L NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 63/149 (42%), Gaps = 14/149 (9%)
Query: 299 NLSFLNLVANQFKGALP--------HSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEE 350
NL L Q G LP H+ + S+P L +L ++++ N+
Sbjct: 61 NLDRAELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHL 410
+ L LQ L ++ N+L P L KL L NNNL+ + L L+ L L L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLL 179
Query: 411 FQNDLSGAIPEEIFNISHMSDSLNFARNH 439
+N L IP+ F SH+ L FA H
Sbjct: 180 QENSLY-TIPKGFFG-SHL---LPFAFLH 203
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 39 LKSKGLIGSLSPQIG--NLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEI 96
L+S L+G P + ++SF R L ++G L L+ LYL N L
Sbjct: 89 LQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRG--------LGELQELYLKGNELKTLP 140
Query: 97 PGNLSYCSRLIGLYLGRNKLEGSIPSEFVS-LYNLKELAIQENNL 140
PG L+ +L L L N L +P+ ++ L NL L +QEN+L
Sbjct: 141 PGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 184
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNN 796
V +DYLH C+ IH D+KP NILL N
Sbjct: 155 VLQGLDYLHTKCR--IIHTDIKPENILLSVN 183
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 766 VASAVDYLHHHCQEPTIHCDLKPSNILLDNN 796
V +DYLH C+ IH D+KP NILL N
Sbjct: 139 VLQGLDYLHTKCR--IIHTDIKPENILLSVN 167
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 772 YLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLA 807
YLH + IH DLK N+ L+ +L +GDFGLA
Sbjct: 130 YLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 31/173 (17%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNIRHRN- 701
+S IG G V++ + I AIK +NL+ S+ E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 702 -LVRVITSCSSIDFQGNDFKALVYQYMPNGSLE--NWLHPDAIPQTDEENDEIRNLTLLE 758
++R+ D++ D +Y M G+++ +WL +++ E
Sbjct: 89 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWLKKK------------KSIDPWE 128
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQ 811
R S ++ AV +H H +H DLKP+N L+ + + + DFG+A Q
Sbjct: 129 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQ 177
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 53 GNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLG 112
G L L + LS+N +Q +P L L L +S N L G L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 113 RNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSL 164
N+L+ P L++L++ NNLT L + +L+ + L NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 63/149 (42%), Gaps = 14/149 (9%)
Query: 299 NLSFLNLVANQFKGALP--------HSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEE 350
NL L Q G LP H+ + S+P L +L ++++ N+
Sbjct: 61 NLDRCELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHL 410
+ L LQ L ++ N+L P L KL L NNNL+ + L L+ L L L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLL 179
Query: 411 FQNDLSGAIPEEIFNISHMSDSLNFARNH 439
+N L IP+ F SH+ L FA H
Sbjct: 180 QENSLY-TIPKGFFG-SHL---LPFAFLH 203
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 39 LKSKGLIGSLSPQIG--NLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEI 96
L+S L+G P + ++SF R L ++G L L+ LYL N L
Sbjct: 89 LQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRG--------LGELQELYLKGNELKTLP 140
Query: 97 PGNLSYCSRLIGLYLGRNKLEGSIPSEFVS-LYNLKELAIQENNL 140
PG L+ +L L L N L +P+ ++ L NL L +QEN+L
Sbjct: 141 PGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL 184
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 33.1 bits (74), Expect = 0.65, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 53 GNLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEIPGNLSYCSRLIGLYLG 112
G L L + LS+N +Q +P L L L +S N L G L L LYL
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 113 RNKLEGSIPSEFVSLYNLKELAIQENNLTGGIPHFLGNITSLEAISLAYNSL 164
N+L+ P L++L++ N LT L + +L+ + L NSL
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 39 LKSKGLIGSLSPQIG--NLSFLREIHLSNNTIQGKIPGEIGRLFRLEALYLSHNSLVGEI 96
L+S L+G P + ++SF R L ++G L L+ LYL N L
Sbjct: 89 LQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRG--------LGELQELYLKGNELKTLP 140
Query: 97 PGNLSYCSRLIGLYLGRNKLEGSIPSEFVS-LYNLKELAIQENNL 140
PG L+ +L L L N+L +P+ ++ L NL L +QEN+L
Sbjct: 141 PGLLTPTPKLEKLSLANNQLT-ELPAGLLNGLENLDTLLLQENSL 184
Score = 30.4 bits (67), Expect = 3.9, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 299 NLSFLNLVANQFKGALP--------HSIVSGSIPSEIGKLVSLYLIEMDHNQFEGKIPEE 350
NL L Q G LP H+ + S+P L +L ++++ N+
Sbjct: 61 NLDRCELTKLQVDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGA 119
Query: 351 MSRLQNLQFLNMRHNQLSGEIPSSFGNLSSLVKLILGNNNLSGVIPSSLGNLKQLALLHL 410
+ L LQ L ++ N+L P L KL L NN L+ + L L+ L L L
Sbjct: 120 LRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLL 179
Query: 411 FQNDLSGAIPEEIFNISHM 429
+N L IP+ F SH+
Sbjct: 180 QENSLY-TIPKGFFG-SHL 196
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 16/164 (9%)
Query: 651 IGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGASKSFAAECRALRNIRHRNLVRVITSCS 710
+G G++G VYK + ++ G S S E LR ++H N++ S
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVI----SLQ 84
Query: 711 SIDFQGNDFKA-LVYQYMPNGSLENWLHPDAIPQTDEENDEIRNLTLLERISIAIDVASA 769
+ D K L++ Y + + H + + N + L S+ +
Sbjct: 85 KVFLSHADRKVWLLFDY----AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG 140
Query: 770 VDYLHHHCQEPTIHCDLKPSNILL----DNNLTAHVGDFGLARL 809
+ YLH + +H DLKP+NIL+ + D G ARL
Sbjct: 141 IHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 31/173 (17%)
Query: 645 FSSTHLIGIGSFGSVYKGTFDRDGTIVAIKVLNLQLQGAS--KSFAAECRALRNIRHRN- 701
+S IG G V++ + I AIK +NL+ S+ E L ++ +
Sbjct: 30 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 702 -LVRVITSCSSIDFQGNDFKALVYQYMPNGSLE--NWLHPDAIPQTDEENDEIRNLTLLE 758
++R+ D++ D +Y M G+++ +WL +++ E
Sbjct: 89 KIIRLY------DYEITD--QYIYMVMECGNIDLNSWLKKK------------KSIDPWE 128
Query: 759 RISIAIDVASAVDYLHHHCQEPTIHCDLKPSNILLDNNLTAHVGDFGLARLRQ 811
R S ++ AV +H H +H DLKP+N L+ + + + DFG+A Q
Sbjct: 129 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQ 177
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,810,124
Number of Sequences: 62578
Number of extensions: 991405
Number of successful extensions: 5153
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 402
Number of HSP's that attempted gapping in prelim test: 2918
Number of HSP's gapped (non-prelim): 1536
length of query: 825
length of database: 14,973,337
effective HSP length: 107
effective length of query: 718
effective length of database: 8,277,491
effective search space: 5943238538
effective search space used: 5943238538
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)