Query 003371
Match_columns 825
No_of_seqs 491 out of 3097
Neff 8.0
Searched_HMMs 46136
Date Thu Mar 28 22:15:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003371.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003371hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 1E-192 3E-197 1591.9 59.2 783 21-825 13-804 (1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 1E-135 3E-140 1137.6 52.1 682 113-825 8-743 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 2E-127 4E-132 1177.9 78.3 716 82-824 11-733 (941)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 5E-123 1E-127 1137.6 72.2 670 113-824 11-810 (1053)
5 COG0474 MgtA Cation transport 100.0 5E-122 1E-126 1118.5 62.2 657 116-825 32-704 (917)
6 TIGR01106 ATPase-IIC_X-K sodiu 100.0 8E-118 2E-122 1095.0 72.1 680 113-824 21-748 (997)
7 PRK10517 magnesium-transportin 100.0 8E-118 2E-122 1078.9 70.3 633 113-825 53-702 (902)
8 PRK15122 magnesium-transportin 100.0 1E-117 3E-122 1078.2 70.8 642 113-825 31-702 (903)
9 TIGR01524 ATPase-IIIB_Mg magne 100.0 5E-117 1E-121 1072.7 71.1 632 113-825 19-667 (867)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 3E-116 7E-121 1072.1 74.7 645 113-824 8-682 (884)
11 TIGR01647 ATPase-IIIA_H plasma 100.0 9E-113 2E-117 1023.2 67.9 599 128-825 1-599 (755)
12 TIGR01116 ATPase-IIA1_Ca sarco 100.0 2E-110 5E-115 1022.2 67.9 643 160-824 1-694 (917)
13 TIGR01657 P-ATPase-V P-type AT 100.0 1E-108 3E-113 1019.1 61.9 635 126-823 137-862 (1054)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 4E-106 8E-111 898.4 28.0 675 113-823 43-769 (1019)
15 PRK01122 potassium-transportin 100.0 1.8E-96 4E-101 855.4 59.6 531 161-819 28-566 (679)
16 PRK14010 potassium-transportin 100.0 2.9E-96 6E-101 853.0 57.4 531 162-824 28-567 (673)
17 TIGR01652 ATPase-Plipid phosph 100.0 9.6E-95 2.1E-99 898.6 58.1 649 143-824 1-832 (1057)
18 TIGR01497 kdpB K+-transporting 100.0 6.2E-92 1.3E-96 815.5 60.1 534 161-822 27-570 (675)
19 PLN03190 aminophospholipid tra 100.0 2.6E-88 5.6E-93 832.6 64.5 653 142-822 86-933 (1178)
20 KOG0208 Cation transport ATPas 100.0 3.8E-87 8.3E-92 756.6 45.3 633 126-821 158-911 (1140)
21 KOG0205 Plasma membrane H+-tra 100.0 4.5E-86 9.8E-91 716.5 36.5 624 111-825 20-649 (942)
22 COG2217 ZntA Cation transport 100.0 4.6E-80 1E-84 717.5 52.4 526 153-823 131-662 (713)
23 PRK11033 zntA zinc/cadmium/mer 100.0 2.5E-77 5.4E-82 714.9 56.6 515 154-823 171-691 (741)
24 TIGR01494 ATPase_P-type ATPase 100.0 1.7E-76 3.6E-81 685.3 51.0 459 201-823 4-464 (499)
25 TIGR01525 ATPase-IB_hvy heavy 100.0 1.4E-74 3.1E-79 675.5 49.9 504 172-823 5-510 (556)
26 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.9E-73 4.2E-78 662.0 50.7 483 171-823 4-489 (536)
27 KOG0207 Cation transport ATPas 100.0 1E-74 2.2E-79 657.0 38.5 539 153-822 291-847 (951)
28 TIGR01511 ATPase-IB1_Cu copper 100.0 3.3E-72 7.2E-77 653.8 54.0 477 191-823 51-529 (562)
29 PRK10671 copA copper exporting 100.0 6.6E-72 1.4E-76 681.0 56.7 491 192-823 284-775 (834)
30 KOG0209 P-type ATPase [Inorgan 100.0 2.5E-74 5.4E-79 638.4 31.9 598 127-790 161-836 (1160)
31 KOG0210 P-type ATPase [Inorgan 100.0 4.6E-71 1E-75 602.2 31.2 628 138-822 74-843 (1051)
32 KOG0206 P-type ATPase [General 100.0 6.4E-70 1.4E-74 647.3 36.8 654 139-823 28-857 (1151)
33 COG2216 KdpB High-affinity K+ 100.0 6.8E-62 1.5E-66 518.3 35.0 492 201-819 74-568 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 2.2E-35 4.8E-40 308.2 21.7 226 199-447 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 1.3E-24 2.7E-29 223.9 14.1 97 653-779 115-215 (215)
36 PF13246 Hydrolase_like2: Puta 99.6 8.4E-15 1.8E-19 129.1 9.2 72 518-592 18-91 (91)
37 COG4087 Soluble P-type ATPase 99.5 2.6E-14 5.5E-19 128.3 10.5 125 655-812 20-146 (152)
38 PF00690 Cation_ATPase_N: Cati 99.2 1.7E-11 3.6E-16 102.4 6.4 66 112-179 4-69 (69)
39 smart00831 Cation_ATPase_N Cat 99.1 7.7E-11 1.7E-15 96.9 6.1 62 120-183 2-63 (64)
40 KOG4383 Uncharacterized conser 99.1 2.5E-08 5.4E-13 111.2 27.1 203 580-784 698-1018(1354)
41 TIGR02137 HSK-PSP phosphoserin 99.0 2.2E-09 4.7E-14 109.5 11.5 130 665-815 68-198 (203)
42 TIGR00338 serB phosphoserine p 98.9 4.5E-09 9.8E-14 108.8 10.9 129 665-811 85-218 (219)
43 TIGR01487 SPP-like sucrose-pho 98.9 5.9E-09 1.3E-13 107.7 10.8 146 665-811 18-214 (215)
44 PRK11133 serB phosphoserine ph 98.9 7.9E-09 1.7E-13 112.5 11.5 131 665-813 181-316 (322)
45 COG0561 Cof Predicted hydrolas 98.9 2.4E-08 5.3E-13 106.5 13.7 149 666-815 21-260 (264)
46 PRK10513 sugar phosphate phosp 98.8 2.9E-08 6.3E-13 106.2 12.9 66 747-813 196-265 (270)
47 PRK01158 phosphoglycolate phos 98.8 3.7E-08 8.1E-13 102.7 13.0 147 666-813 21-226 (230)
48 PRK10976 putative hydrolase; P 98.8 6.1E-08 1.3E-12 103.5 14.1 66 747-813 190-261 (266)
49 PRK15126 thiamin pyrimidine py 98.8 4.8E-08 1E-12 104.7 12.8 66 747-813 188-259 (272)
50 PF08282 Hydrolase_3: haloacid 98.7 6.5E-08 1.4E-12 101.6 11.7 148 664-812 14-254 (254)
51 TIGR02726 phenyl_P_delta pheny 98.7 6E-08 1.3E-12 95.6 10.3 100 672-804 41-142 (169)
52 TIGR01482 SPP-subfamily Sucros 98.7 1.1E-07 2.4E-12 98.7 11.7 148 665-813 15-222 (225)
53 COG0560 SerB Phosphoserine pho 98.7 1.5E-07 3.3E-12 96.5 11.7 117 664-801 76-200 (212)
54 TIGR01670 YrbI-phosphatas 3-de 98.6 1.7E-07 3.6E-12 91.5 10.7 106 673-813 36-149 (154)
55 PLN02887 hydrolase family prot 98.6 3E-07 6.4E-12 107.2 13.2 52 761-813 525-576 (580)
56 PRK10530 pyridoxal phosphate ( 98.6 4.5E-07 9.7E-12 97.1 13.5 66 747-813 199-268 (272)
57 TIGR00099 Cof-subfamily Cof su 98.5 5.1E-07 1.1E-11 95.9 11.7 64 747-811 188-255 (256)
58 PRK13582 thrH phosphoserine ph 98.5 7.3E-07 1.6E-11 91.2 11.4 127 665-813 68-196 (205)
59 PRK09484 3-deoxy-D-manno-octul 98.5 4.9E-07 1.1E-11 90.9 9.8 111 672-817 55-173 (183)
60 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 5.2E-07 1.1E-11 91.8 9.8 117 665-797 80-200 (201)
61 TIGR01486 HAD-SF-IIB-MPGP mann 98.5 1.9E-06 4.1E-11 91.5 14.0 147 666-813 17-253 (256)
62 TIGR03333 salvage_mtnX 2-hydro 98.4 2.6E-06 5.7E-11 87.9 11.2 139 664-813 69-209 (214)
63 PRK03669 mannosyl-3-phosphogly 98.3 1.1E-05 2.4E-10 86.4 14.0 148 666-813 25-265 (271)
64 PF12710 HAD: haloacid dehalog 98.3 2.4E-06 5.2E-11 86.1 8.4 92 668-776 92-192 (192)
65 PRK00192 mannosyl-3-phosphogly 98.3 1E-05 2.2E-10 86.8 13.4 149 664-813 20-267 (273)
66 PLN02954 phosphoserine phospha 98.2 1.3E-05 2.9E-10 83.1 12.2 128 665-811 84-222 (224)
67 KOG1615 Phosphoserine phosphat 98.1 3.7E-06 8.1E-11 81.6 6.2 110 665-785 88-199 (227)
68 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 9.9E-06 2.2E-10 81.3 8.8 113 664-783 71-186 (188)
69 TIGR01488 HAD-SF-IB Haloacid D 98.1 7.1E-06 1.5E-10 81.6 7.4 97 665-778 73-177 (177)
70 PRK09552 mtnX 2-hydroxy-3-keto 98.1 1.6E-05 3.5E-10 82.4 10.1 135 665-813 74-213 (219)
71 PRK13222 phosphoglycolate phos 98.0 2.6E-05 5.7E-10 80.8 11.0 126 664-814 92-223 (226)
72 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 2.4E-05 5.1E-10 79.8 9.5 106 663-785 85-197 (202)
73 TIGR02471 sucr_syn_bact_C sucr 98.0 8.7E-05 1.9E-09 77.8 13.6 66 747-813 159-232 (236)
74 COG1778 Low specificity phosph 97.9 2.2E-05 4.8E-10 74.0 6.7 113 672-819 42-162 (170)
75 COG0546 Gph Predicted phosphat 97.9 7.3E-05 1.6E-09 77.5 10.5 128 663-813 87-218 (220)
76 cd01427 HAD_like Haloacid deha 97.8 5.6E-05 1.2E-09 70.8 7.7 113 661-778 20-132 (139)
77 PF12515 CaATP_NAI: Ca2+-ATPas 97.8 1.1E-05 2.5E-10 59.8 1.6 27 22-48 13-40 (47)
78 TIGR02461 osmo_MPG_phos mannos 97.8 0.00017 3.7E-09 75.0 10.9 44 663-706 13-56 (225)
79 TIGR01454 AHBA_synth_RP 3-amin 97.7 0.00018 3.9E-09 73.6 10.3 126 665-813 75-204 (205)
80 TIGR01485 SPP_plant-cyano sucr 97.7 0.00035 7.7E-09 73.8 12.8 150 663-813 19-244 (249)
81 TIGR02463 MPGP_rel mannosyl-3- 97.7 0.0004 8.7E-09 71.9 12.5 39 667-705 18-56 (221)
82 PRK08238 hypothetical protein; 97.5 0.00042 9.2E-09 79.7 10.6 101 665-793 72-172 (479)
83 PRK13223 phosphoglycolate phos 97.5 0.00053 1.2E-08 73.5 10.2 127 664-813 100-230 (272)
84 PRK13288 pyrophosphatase PpaX; 97.4 0.00074 1.6E-08 69.5 9.9 125 665-812 82-210 (214)
85 PLN02382 probable sucrose-phos 97.4 0.0016 3.4E-08 73.9 12.6 147 666-813 29-257 (413)
86 PRK12702 mannosyl-3-phosphogly 97.4 0.00099 2.1E-08 70.6 10.0 42 665-706 18-59 (302)
87 TIGR01449 PGP_bact 2-phosphogl 97.3 0.00088 1.9E-08 68.7 8.8 120 665-810 85-211 (213)
88 PRK14502 bifunctional mannosyl 97.3 0.0015 3.2E-08 76.7 11.4 40 666-705 434-473 (694)
89 PRK10826 2-deoxyglucose-6-phos 97.2 0.0013 2.9E-08 68.1 9.2 121 664-810 91-217 (222)
90 TIGR01544 HAD-SF-IE haloacid d 97.2 0.003 6.5E-08 67.0 11.7 132 664-813 120-274 (277)
91 PRK10187 trehalose-6-phosphate 97.2 0.001 2.3E-08 70.9 8.1 140 665-811 36-239 (266)
92 PRK13226 phosphoglycolate phos 97.1 0.003 6.6E-08 65.8 10.2 127 665-814 95-226 (229)
93 PTZ00174 phosphomannomutase; P 97.0 0.004 8.6E-08 65.8 10.4 54 746-800 187-245 (247)
94 TIGR03351 PhnX-like phosphonat 96.8 0.0055 1.2E-07 63.2 9.7 122 664-811 86-218 (220)
95 PRK13225 phosphoglycolate phos 96.8 0.0079 1.7E-07 64.4 11.1 119 665-812 142-267 (273)
96 TIGR01545 YfhB_g-proteo haloac 96.8 0.006 1.3E-07 62.7 9.5 107 665-786 94-202 (210)
97 TIGR01484 HAD-SF-IIB HAD-super 96.7 0.0072 1.6E-07 61.6 9.4 39 665-703 17-55 (204)
98 PRK11590 hypothetical protein; 96.7 0.0084 1.8E-07 61.7 9.9 104 665-785 95-202 (211)
99 PLN03243 haloacid dehalogenase 96.6 0.011 2.4E-07 62.9 10.4 124 665-811 109-233 (260)
100 TIGR01422 phosphonatase phosph 96.6 0.0095 2.1E-07 63.0 10.0 94 665-781 99-196 (253)
101 PRK13478 phosphonoacetaldehyde 96.6 0.011 2.3E-07 63.3 10.2 123 665-812 101-254 (267)
102 PLN02770 haloacid dehalogenase 96.6 0.013 2.8E-07 61.9 10.6 120 665-807 108-230 (248)
103 COG4030 Uncharacterized protei 96.5 0.015 3.2E-07 58.3 9.3 144 666-813 84-262 (315)
104 TIGR01548 HAD-SF-IA-hyp1 haloa 96.5 0.01 2.2E-07 60.3 8.5 94 663-778 104-197 (197)
105 PRK14501 putative bifunctional 96.5 0.024 5.2E-07 69.4 13.2 170 610-813 480-721 (726)
106 PRK11009 aphA acid phosphatase 96.4 0.0089 1.9E-07 62.4 7.5 88 664-781 113-206 (237)
107 PRK11587 putative phosphatase; 96.3 0.023 5.1E-07 58.6 10.1 112 665-801 83-198 (218)
108 TIGR01672 AphA HAD superfamily 96.2 0.01 2.2E-07 61.9 6.9 88 666-781 115-206 (237)
109 COG4359 Uncharacterized conser 96.2 0.012 2.6E-07 57.2 6.7 107 665-784 73-184 (220)
110 TIGR01428 HAD_type_II 2-haloal 96.0 0.027 5.9E-07 57.1 8.7 93 665-781 92-187 (198)
111 smart00775 LNS2 LNS2 domain. T 95.9 0.05 1.1E-06 53.2 9.8 101 663-780 25-140 (157)
112 TIGR01990 bPGM beta-phosphoglu 95.9 0.017 3.7E-07 57.6 6.5 91 665-781 87-180 (185)
113 PRK08942 D,D-heptose 1,7-bisph 95.8 0.056 1.2E-06 54.0 10.1 127 666-813 30-177 (181)
114 TIGR01509 HAD-SF-IA-v3 haloaci 95.7 0.04 8.6E-07 54.7 8.3 94 665-780 85-178 (183)
115 PLN02575 haloacid dehalogenase 95.6 0.068 1.5E-06 59.5 10.6 120 665-810 216-339 (381)
116 TIGR02253 CTE7 HAD superfamily 95.6 0.036 7.7E-07 57.2 8.0 93 665-781 94-190 (221)
117 PHA02530 pseT polynucleotide k 95.6 0.029 6.3E-07 60.9 7.6 107 662-782 184-292 (300)
118 PF05116 S6PP: Sucrose-6F-phos 95.6 0.041 8.9E-07 58.1 8.2 45 746-791 164-212 (247)
119 TIGR01685 MDP-1 magnesium-depe 95.6 0.055 1.2E-06 53.7 8.5 112 655-784 35-155 (174)
120 TIGR01662 HAD-SF-IIIA HAD-supe 95.4 0.088 1.9E-06 49.5 9.1 92 664-780 24-125 (132)
121 PRK06698 bifunctional 5'-methy 95.3 0.054 1.2E-06 62.7 8.9 122 665-813 330-454 (459)
122 TIGR02009 PGMB-YQAB-SF beta-ph 95.3 0.04 8.6E-07 55.0 6.6 92 664-781 87-181 (185)
123 PF13419 HAD_2: Haloacid dehal 95.2 0.035 7.5E-07 54.3 5.9 97 664-781 76-172 (176)
124 PRK06769 hypothetical protein; 95.2 0.083 1.8E-06 52.5 8.5 124 666-811 29-170 (173)
125 TIGR02254 YjjG/YfnB HAD superf 95.1 0.058 1.3E-06 55.6 7.5 119 665-811 97-223 (224)
126 PRK09449 dUMP phosphatase; Pro 94.9 0.11 2.3E-06 53.8 8.8 122 665-813 95-223 (224)
127 COG2179 Predicted hydrolase of 94.8 0.24 5.1E-06 47.9 9.8 107 614-778 20-130 (175)
128 PLN02940 riboflavin kinase 94.7 0.099 2.1E-06 58.9 8.6 118 665-808 93-216 (382)
129 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.6 0.34 7.3E-06 50.9 11.8 93 658-779 17-115 (242)
130 PLN02779 haloacid dehalogenase 94.6 0.13 2.8E-06 55.6 8.7 121 665-808 144-268 (286)
131 PLN02580 trehalose-phosphatase 94.6 0.44 9.5E-06 53.2 12.9 66 742-812 293-373 (384)
132 TIGR01668 YqeG_hyp_ppase HAD s 94.5 0.11 2.5E-06 51.3 7.6 83 665-780 43-130 (170)
133 PRK14988 GMP/IMP nucleotidase; 94.5 0.095 2.1E-06 54.4 7.3 94 665-782 93-189 (224)
134 TIGR01533 lipo_e_P4 5'-nucleot 94.0 0.25 5.4E-06 52.5 9.0 87 663-776 116-205 (266)
135 COG3769 Predicted hydrolase (H 93.6 0.7 1.5E-05 46.6 10.7 38 668-705 26-63 (274)
136 TIGR02252 DREG-2 REG-2-like, H 93.6 0.2 4.4E-06 50.8 7.5 91 665-780 105-199 (203)
137 TIGR01549 HAD-SF-IA-v1 haloaci 93.5 0.23 5E-06 47.9 7.3 89 665-779 64-154 (154)
138 PF06888 Put_Phosphatase: Puta 93.2 0.13 2.8E-06 53.5 5.3 110 665-782 71-195 (234)
139 PRK05446 imidazole glycerol-ph 93.2 0.23 5E-06 55.0 7.5 98 664-783 29-145 (354)
140 TIGR01656 Histidinol-ppas hist 93.1 0.26 5.7E-06 47.4 7.0 96 665-781 27-140 (147)
141 PLN02811 hydrolase 93.1 0.25 5.4E-06 51.0 7.3 95 664-782 77-180 (220)
142 TIGR00213 GmhB_yaeD D,D-heptos 92.8 0.45 9.7E-06 47.3 8.4 27 666-692 27-53 (176)
143 PLN02919 haloacid dehalogenase 92.8 0.4 8.7E-06 61.0 9.9 132 666-822 162-301 (1057)
144 smart00577 CPDc catalytic doma 92.8 0.11 2.4E-06 50.2 3.8 92 664-782 44-138 (148)
145 PLN02205 alpha,alpha-trehalose 92.5 0.65 1.4E-05 57.5 10.8 38 665-702 616-654 (854)
146 TIGR01681 HAD-SF-IIIC HAD-supe 92.0 0.45 9.7E-06 44.7 6.8 39 665-703 29-68 (128)
147 PF13344 Hydrolase_6: Haloacid 91.9 0.49 1.1E-05 42.5 6.6 49 658-706 7-58 (101)
148 TIGR01675 plant-AP plant acid 91.8 0.84 1.8E-05 47.3 9.0 89 663-773 118-210 (229)
149 PF09419 PGP_phosphatase: Mito 91.8 0.55 1.2E-05 46.2 7.3 80 663-773 57-151 (168)
150 TIGR01691 enolase-ppase 2,3-di 91.2 0.61 1.3E-05 48.2 7.4 98 662-782 92-192 (220)
151 PRK10563 6-phosphogluconate ph 91.1 0.35 7.6E-06 49.8 5.6 127 665-819 88-219 (221)
152 TIGR00685 T6PP trehalose-phosp 90.8 0.26 5.5E-06 51.9 4.2 70 739-813 159-240 (244)
153 TIGR01261 hisB_Nterm histidino 90.7 0.55 1.2E-05 46.1 6.2 98 665-783 29-144 (161)
154 TIGR02247 HAD-1A3-hyp Epoxide 90.5 0.37 8.1E-06 49.2 5.1 94 664-781 93-191 (211)
155 TIGR01664 DNA-3'-Pase DNA 3'-p 89.9 0.96 2.1E-05 44.6 7.1 40 666-705 43-94 (166)
156 TIGR01686 FkbH FkbH-like domai 89.4 1 2.3E-05 49.4 7.7 90 665-784 31-128 (320)
157 PLN03017 trehalose-phosphatase 89.2 7.2 0.00016 43.3 13.9 46 653-699 119-166 (366)
158 PLN02645 phosphoglycolate phos 88.9 0.75 1.6E-05 50.3 6.2 48 658-705 37-87 (311)
159 PRK09456 ?-D-glucose-1-phospha 87.1 1.3 2.9E-05 44.7 6.4 94 665-782 84-181 (199)
160 PHA02597 30.2 hypothetical pro 86.3 2.5 5.4E-05 42.6 7.8 94 665-782 74-170 (197)
161 TIGR01993 Pyr-5-nucltdase pyri 84.7 2 4.3E-05 42.8 6.0 95 665-781 84-180 (184)
162 PRK10725 fructose-1-P/6-phosph 83.4 3 6.5E-05 41.5 6.8 89 667-781 90-181 (188)
163 KOG3120 Predicted haloacid deh 83.3 1.7 3.6E-05 44.1 4.6 114 665-792 84-216 (256)
164 TIGR01452 PGP_euk phosphoglyco 81.7 14 0.00031 39.6 11.6 49 658-706 11-62 (279)
165 PF08235 LNS2: LNS2 (Lipin/Ned 80.1 13 0.00028 36.2 9.3 103 663-781 25-141 (157)
166 PF03767 Acid_phosphat_B: HAD 77.7 2 4.4E-05 44.7 3.4 89 664-774 114-207 (229)
167 TIGR01684 viral_ppase viral ph 77.4 5 0.00011 43.0 6.2 41 666-706 146-187 (301)
168 COG0241 HisB Histidinol phosph 75.8 7.3 0.00016 38.8 6.5 97 666-781 32-144 (181)
169 TIGR01458 HAD-SF-IIA-hyp3 HAD- 73.3 4.5 9.8E-05 42.9 4.7 48 658-705 10-64 (257)
170 PHA03398 viral phosphatase sup 71.2 7 0.00015 42.0 5.4 41 666-706 148-189 (303)
171 TIGR01647 ATPase-IIIA_H plasma 71.1 56 0.0012 40.4 14.1 233 154-431 28-270 (755)
172 TIGR02251 HIF-SF_euk Dullard-l 71.1 2.7 5.8E-05 41.2 2.1 41 664-705 41-81 (162)
173 PTZ00445 p36-lilke protein; Pr 71.0 8.6 0.00019 39.1 5.7 64 607-693 28-103 (219)
174 PRK10444 UMP phosphatase; Prov 70.8 4.5 9.7E-05 42.7 3.9 48 658-705 10-60 (248)
175 COG0637 Predicted phosphatase/ 70.6 11 0.00024 38.9 6.7 98 664-782 85-182 (221)
176 TIGR01680 Veg_Stor_Prot vegeta 70.2 23 0.0005 37.6 8.9 89 663-773 143-236 (275)
177 TIGR01517 ATPase-IIB_Ca plasma 69.7 67 0.0014 40.9 14.6 257 155-431 89-360 (941)
178 KOG3040 Predicted sugar phosph 68.2 10 0.00022 38.3 5.3 51 655-705 13-66 (262)
179 PLN02151 trehalose-phosphatase 68.1 74 0.0016 35.4 12.7 48 653-701 106-155 (354)
180 TIGR01457 HAD-SF-IIA-hyp2 HAD- 68.1 9 0.00019 40.4 5.5 49 658-706 10-61 (249)
181 PLN02177 glycerol-3-phosphate 68.0 23 0.0005 41.3 9.2 99 666-786 111-215 (497)
182 PRK10748 flavin mononucleotide 65.2 13 0.00028 38.8 6.0 90 665-784 113-206 (238)
183 TIGR01493 HAD-SF-IA-v2 Haloaci 62.2 8.2 0.00018 37.8 3.7 84 665-778 90-175 (175)
184 COG1011 Predicted hydrolase (H 57.7 35 0.00076 34.8 7.6 91 664-779 98-192 (229)
185 TIGR02244 HAD-IG-Ncltidse HAD 57.0 23 0.00051 39.1 6.3 104 667-778 186-315 (343)
186 TIGR01689 EcbF-BcbF capsule bi 55.7 14 0.00031 34.6 3.8 33 664-696 23-55 (126)
187 COG3700 AphA Acid phosphatase 55.1 24 0.00053 34.6 5.3 86 666-780 115-205 (237)
188 COG0474 MgtA Cation transport 53.1 3.3E+02 0.0071 34.6 16.3 244 155-431 73-332 (917)
189 PLN02423 phosphomannomutase 52.2 17 0.00036 38.2 4.2 39 746-785 188-231 (245)
190 TIGR01106 ATPase-IIC_X-K sodiu 50.9 2E+02 0.0043 37.0 14.1 200 199-427 113-324 (997)
191 PF05822 UMPH-1: Pyrimidine 5' 50.5 26 0.00057 36.7 5.1 134 664-812 89-241 (246)
192 PRK14194 bifunctional 5,10-met 50.2 1.3E+02 0.0028 32.6 10.5 64 739-802 137-209 (301)
193 TIGR01657 P-ATPase-V P-type AT 49.4 5.4E+02 0.012 33.3 17.8 36 250-285 235-273 (1054)
194 TIGR01663 PNK-3'Pase polynucle 49.2 51 0.0011 38.8 7.8 40 666-705 198-249 (526)
195 PF13380 CoA_binding_2: CoA bi 48.8 23 0.0005 32.5 4.0 39 667-705 65-104 (116)
196 TIGR01501 MthylAspMutase methy 47.1 1E+02 0.0022 29.2 8.1 81 616-705 24-112 (134)
197 PRK00652 lpxK tetraacyldisacch 46.2 46 0.00099 36.6 6.4 58 750-807 70-154 (325)
198 PRK14179 bifunctional 5,10-met 45.4 2E+02 0.0044 30.9 11.0 63 739-801 136-207 (284)
199 COG0647 NagD Predicted sugar p 43.8 27 0.00058 37.3 4.0 45 658-702 17-61 (269)
200 PF02358 Trehalose_PPase: Treh 43.7 72 0.0016 33.0 7.3 63 739-801 157-232 (235)
201 PF03120 DNA_ligase_OB: NAD-de 43.5 12 0.00026 32.2 1.1 20 246-265 47-67 (82)
202 COG3329 Predicted permease [Ge 42.6 1.3E+02 0.0027 32.5 8.5 64 134-197 185-248 (372)
203 PRK01906 tetraacyldisaccharide 40.9 56 0.0012 36.1 6.1 59 749-807 76-161 (338)
204 PF00389 2-Hacid_dh: D-isomer 40.7 1.3E+02 0.0028 28.0 7.9 76 739-823 42-120 (133)
205 TIGR01116 ATPase-IIA1_Ca sarco 40.6 6.3E+02 0.014 32.1 16.2 221 191-431 38-273 (917)
206 TIGR02250 FCP1_euk FCP1-like p 39.6 46 0.001 32.4 4.7 41 664-705 57-97 (156)
207 PRK02261 methylaspartate mutas 38.6 1.3E+02 0.0027 28.6 7.4 81 616-705 26-114 (137)
208 cd02071 MM_CoA_mut_B12_BD meth 38.6 1.1E+02 0.0023 28.3 6.8 82 616-706 22-105 (122)
209 TIGR01522 ATPase-IIA2_Ca golgi 38.1 9.4E+02 0.02 30.4 18.4 200 203-431 93-308 (884)
210 PF02606 LpxK: Tetraacyldisacc 37.2 64 0.0014 35.5 5.9 59 749-807 55-140 (326)
211 TIGR01494 ATPase_P-type ATPase 36.9 2.7E+02 0.0059 32.5 11.5 157 237-430 53-213 (499)
212 TIGR01456 CECR5 HAD-superfamil 35.5 1.5E+02 0.0032 32.5 8.5 48 658-705 9-64 (321)
213 TIGR01458 HAD-SF-IIA-hyp3 HAD- 35.3 2.1E+02 0.0045 30.2 9.3 126 667-812 122-254 (257)
214 PRK14189 bifunctional 5,10-met 33.6 6E+02 0.013 27.4 12.3 168 602-801 11-207 (285)
215 PF12710 HAD: haloacid dehalog 32.8 22 0.00048 35.1 1.3 14 454-467 1-14 (192)
216 TIGR00262 trpA tryptophan synt 32.3 2.3E+02 0.005 29.9 9.0 42 662-703 121-164 (256)
217 TIGR00682 lpxK tetraacyldisacc 32.2 1E+02 0.0022 33.7 6.4 58 750-807 49-133 (311)
218 PRK14169 bifunctional 5,10-met 32.1 4E+02 0.0087 28.7 10.7 62 740-801 135-205 (282)
219 PRK14188 bifunctional 5,10-met 32.1 3.4E+02 0.0074 29.4 10.3 63 739-801 136-207 (296)
220 PLN02591 tryptophan synthase 31.8 3.2E+02 0.007 28.8 9.8 108 658-795 109-225 (250)
221 PF07302 AroM: AroM protein; 31.8 57 0.0012 33.7 4.1 30 663-692 69-100 (221)
222 PF01455 HupF_HypC: HupF/HypC 31.3 1.1E+02 0.0023 25.4 4.8 33 230-262 16-51 (68)
223 PF00122 E1-E2_ATPase: E1-E2 A 31.0 1.2E+02 0.0025 31.1 6.5 195 203-433 2-212 (230)
224 TIGR00640 acid_CoA_mut_C methy 30.9 1.7E+02 0.0037 27.5 6.9 82 616-706 25-108 (132)
225 cd00860 ThrRS_anticodon ThrRS 30.8 1E+02 0.0022 26.2 5.1 47 659-705 6-53 (91)
226 cd05017 SIS_PGI_PMI_1 The memb 30.5 87 0.0019 28.6 4.8 38 666-705 55-92 (119)
227 PF02219 MTHFR: Methylenetetra 29.2 1.8E+02 0.0039 31.3 7.7 44 651-694 68-112 (287)
228 PF05240 APOBEC_C: APOBEC-like 29.0 59 0.0013 25.7 2.8 24 668-691 2-25 (55)
229 PF15584 Imm44: Immunity prote 28.8 24 0.00052 30.7 0.7 19 251-269 13-31 (94)
230 PF03129 HGTP_anticodon: Antic 28.7 1.4E+02 0.0031 25.6 5.7 48 658-705 3-54 (94)
231 cd02067 B12-binding B12 bindin 28.5 1.5E+02 0.0034 26.8 6.1 81 616-705 22-104 (119)
232 PF12689 Acid_PPase: Acid Phos 27.8 96 0.0021 30.6 4.8 41 665-705 45-86 (169)
233 PF11431 Transport_MerF: Membr 27.8 96 0.0021 23.4 3.5 17 167-183 2-18 (46)
234 COG1877 OtsB Trehalose-6-phosp 27.5 4.7E+02 0.01 27.9 10.2 131 654-786 29-229 (266)
235 COG1609 PurR Transcriptional r 27.5 8.4E+02 0.018 26.7 13.1 140 601-769 26-185 (333)
236 COG0272 Lig NAD-dependent DNA 27.0 97 0.0021 37.1 5.3 51 652-705 596-655 (667)
237 TIGR01652 ATPase-Plipid phosph 26.2 2.1E+02 0.0046 37.0 8.7 115 153-274 18-145 (1057)
238 TIGR00640 acid_CoA_mut_C methy 25.4 5.7E+02 0.012 24.0 11.0 104 655-791 5-116 (132)
239 PF03739 YjgP_YjgQ: Predicted 25.2 2E+02 0.0044 31.6 7.5 38 401-438 44-81 (354)
240 KOG0206 P-type ATPase [General 24.7 1E+02 0.0022 39.6 5.3 101 153-262 49-160 (1151)
241 PRK11507 ribosome-associated p 24.6 78 0.0017 26.3 2.9 26 234-259 38-63 (70)
242 TIGR00676 fadh2 5,10-methylene 24.4 2.4E+02 0.0053 30.0 7.6 83 608-693 15-99 (272)
243 CHL00200 trpA tryptophan synth 24.4 4.4E+02 0.0095 28.0 9.4 104 662-793 125-236 (263)
244 PRK14175 bifunctional 5,10-met 23.4 2.9E+02 0.0062 29.8 7.8 62 739-801 136-207 (286)
245 PRK15122 magnesium-transportin 23.3 7.7E+02 0.017 31.3 12.8 199 200-430 121-352 (903)
246 cd02070 corrinoid_protein_B12- 23.3 1.2E+02 0.0026 30.7 4.7 80 616-705 105-186 (201)
247 TIGR01460 HAD-SF-IIA Haloacid 23.3 93 0.002 32.3 4.0 48 658-705 7-58 (236)
248 KOG1250 Threonine/serine dehyd 23.0 2.8E+02 0.006 31.2 7.5 75 668-775 99-176 (457)
249 cd01019 ZnuA Zinc binding prot 22.9 1.8E+02 0.004 31.2 6.3 55 651-705 195-253 (286)
250 PRK09432 metF 5,10-methylenete 22.6 3E+02 0.0065 29.8 7.8 43 651-693 80-123 (296)
251 PRK14170 bifunctional 5,10-met 22.6 3.2E+02 0.007 29.4 7.9 43 664-706 12-63 (284)
252 cd00859 HisRS_anticodon HisRS 22.5 1.5E+02 0.0033 24.6 4.7 47 659-705 6-53 (91)
253 PLN02389 biotin synthase 22.3 8.6E+02 0.019 27.4 11.6 77 668-762 153-229 (379)
254 PF06506 PrpR_N: Propionate ca 22.1 2.7E+02 0.0058 27.5 6.8 105 669-822 65-170 (176)
255 PRK15424 propionate catabolism 22.0 7.6E+02 0.017 29.3 11.6 70 669-770 95-165 (538)
256 PF02401 LYTB: LytB protein; 21.9 1.9E+02 0.004 31.2 6.0 175 579-790 72-267 (281)
257 PF14336 DUF4392: Domain of un 21.9 2.5E+02 0.0055 30.3 7.1 38 668-705 63-101 (291)
258 PRK14172 bifunctional 5,10-met 21.5 3.5E+02 0.0075 29.1 7.8 62 740-801 137-207 (278)
259 TIGR00612 ispG_gcpE 1-hydroxy- 21.5 1.7E+02 0.0037 32.1 5.4 90 672-785 214-315 (346)
260 cd01137 PsaA Metal binding pro 21.4 2.1E+02 0.0045 30.8 6.4 55 651-705 193-251 (287)
261 PRK04302 triosephosphate isome 21.3 4.1E+02 0.0089 27.2 8.4 97 668-785 101-202 (223)
262 TIGR02370 pyl_corrinoid methyl 21.3 1.2E+02 0.0027 30.5 4.4 80 616-705 107-188 (197)
263 PLN03190 aminophospholipid tra 21.2 3.6E+02 0.0078 35.3 9.3 58 201-258 145-211 (1178)
264 PRK10671 copA copper exporting 20.8 3.6E+02 0.0077 33.9 9.1 159 236-431 341-501 (834)
265 PF09926 DUF2158: Uncharacteri 20.4 60 0.0013 25.4 1.4 12 250-261 2-13 (53)
266 cd01994 Alpha_ANH_like_IV This 20.2 5.1E+02 0.011 26.1 8.5 16 691-706 46-61 (194)
267 PRK14174 bifunctional 5,10-met 20.2 4.5E+02 0.0097 28.5 8.4 62 740-802 138-213 (295)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-192 Score=1591.90 Aligned_cols=783 Identities=48% Similarity=0.759 Sum_probs=720.0
Q ss_pred ccchHHHHhHHHhhhhhccchhhhhcccccccc----ccccccccc---ccccccCCCCCCCccccccccCCCCCCCCCH
Q 003371 21 STLTKAQKRWRLAYWTIYSFRAMLSVLPKGRLL----SAEILTSHD---YIALDVEPEPSSSHDEANKLVSNSIDPDMDG 93 (825)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (825)
+++.++++|||.|..+++++|||++..+.++.+ ...+.++.. .++..+.++.... .-.-+|++
T Consensus 13 n~~~~~~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~r~~~r~~~~~~~a~~~~~~~~~~~----------e~~~~i~~ 82 (1034)
T KOG0204|consen 13 NSSIEALQRWRLAYIVLEASRRFRFGASLKKLRELMEPRRKIRSAVLVSKAAALFIDAGSRT----------EYTLGIGA 82 (1034)
T ss_pred cchhhhhhhhhhhhhhcccchhhccccCHHHHHHHHHHHhhhhhhhcccchhhhhhcccccc----------ccccccCH
Confidence 577899999999999999999999987532111 111333332 3345555443321 01127899
Q ss_pred HHHHHHhcCCChhHHHhhCCHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHH
Q 003371 94 IRLAEMVKNKDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILL 173 (825)
Q Consensus 94 ~~l~~~~~~~~~~~l~~~ggv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~ 173 (825)
|+|.++++++|.+.|+++||++|||++|+||+..||+++++++.+|++.||+|.||++++|+||+|+||+|+|.+++||+
T Consensus 83 e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~ 162 (1034)
T KOG0204|consen 83 EELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILM 162 (1034)
T ss_pred HHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCe
Q 003371 174 VCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGD 253 (825)
Q Consensus 174 v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGD 253 (825)
+||++|+++|+.++|.++|||||++|+++++++++|+|++||+|++||++|++++.+.+++|+|||++++|+++||||||
T Consensus 163 vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGD 242 (1034)
T KOG0204|consen 163 VAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGD 242 (1034)
T ss_pred HHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCC
Q 003371 254 IVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSD 333 (825)
Q Consensus 254 IV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~ 333 (825)
|++|+.||+|||||++++|++|.||||+|||||++++|+...+|||+|||++++|+|+|+||+||+||+||++|.++..+
T Consensus 243 Iv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~ 322 (1034)
T KOG0204|consen 243 IVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAG 322 (1034)
T ss_pred EEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcC
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHh
Q 003371 334 SNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAI 413 (825)
Q Consensus 334 ~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvav 413 (825)
.+++||||.+|+++|..|+++|+++|+++|++++++|+.+++..+.+. ......+.++.++.+|+++++++|||+
T Consensus 323 ~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~-----~~~~~~~~~~~~v~~f~i~VTilVVAV 397 (1034)
T KOG0204|consen 323 GEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGT-----GTTWSDEYIQEFVKFFIIAVTILVVAV 397 (1034)
T ss_pred CCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCC-----CccccHHHHHHHHHHhhheeEEEEEEC
Confidence 989999999999999999999999999999999999999988765432 122344567799999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccccccc--ccCChHH
Q 003371 414 PEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETY--CKIASSI 491 (825)
Q Consensus 414 P~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--~~~~~~~ 491 (825)
|||||||||++|||+|+|||+|++|||+++||||||++|+||+|||||||+|+|+|++.|++++.+..+.. ..+++++
T Consensus 398 PEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~ 477 (1034)
T KOG0204|consen 398 PEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSL 477 (1034)
T ss_pred CCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988774333 4699999
Q ss_pred HHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCC
Q 003371 492 RDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKAD 571 (825)
Q Consensus 492 ~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~ 571 (825)
.+++.+++++|+++++..+......++++|+|||+|||.|+. ++|++++..|.+.++++++||||.||+|||+++.+++
T Consensus 478 ~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~-~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~ 556 (1034)
T KOG0204|consen 478 LDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGL-KLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDG 556 (1034)
T ss_pred HHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHH-HhCcchHhhcchhheeEEeccCcccceeeEEEEcCCC
Confidence 999999999999999987644445899999999999999999 7999999999999999999999999999999998888
Q ss_pred CeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhc
Q 003371 572 NTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKE 651 (825)
Q Consensus 572 ~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e 651 (825)
+.| +|||||+|+||.+|++|++++|+..+++++.+..+++.|+.||++||||+|+|||++....+..+ ....+..++
T Consensus 557 ~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~--~~~~~~~~~ 633 (1034)
T KOG0204|consen 557 GHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEP--SWDNEELPE 633 (1034)
T ss_pred CeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCC--CccccccCC
Confidence 765 99999999999999999999999999999999999999999999999999999999754311111 012245678
Q ss_pred cCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHH
Q 003371 652 EGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERI 731 (825)
Q Consensus 652 ~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~ 731 (825)
.+|+++|++||+||+||||++||+.||+|||+|+|+||||+.||+|||.+|||++++. +..++||++||+++++|++
T Consensus 634 ~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~---d~~~lEG~eFr~~s~ee~~ 710 (1034)
T KOG0204|consen 634 GGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGG---DFLALEGKEFRELSQEERD 710 (1034)
T ss_pred CCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCC---ccceecchhhhhcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999864 3689999999999999999
Q ss_pred hhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 732 QKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 732 ~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
+++|+++|+||+||.||+.+|+.|+++||+||+||||+||+||||+||||+|||++|||||||+|||||+||||++||++
T Consensus 711 ~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~ 790 (1034)
T KOG0204|consen 711 KIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKA 790 (1034)
T ss_pred hhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHhhccccCC
Q 003371 812 LSPGDQLHSGCFCW 825 (825)
Q Consensus 812 i~~gR~i~~ni~~~ 825 (825)
++|||++|+||.+|
T Consensus 791 v~WGR~VY~nIqKF 804 (1034)
T KOG0204|consen 791 VKWGRNVYDNIQKF 804 (1034)
T ss_pred HHhhhHHHHHHHHh
Confidence 99999999999654
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-135 Score=1137.56 Aligned_cols=682 Identities=34% Similarity=0.527 Sum_probs=591.5
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCc
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~ 192 (825)
.+++.+..|+|++++||+.+| +.+|++.||.|+++....+++|+++++||.|+.+.+|+++|++||+++ .
T Consensus 8 ~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~--------~ 77 (972)
T KOG0202|consen 8 SVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA--------D 77 (972)
T ss_pred cHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH--------h
Confidence 588999999999999999976 999999999999999999999999999999999999999999999997 3
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEec
Q 003371 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDG 272 (825)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g 272 (825)
|.|+++|.+++++++.|..+++|+.++..+.|+++ .+..++|+|+|+.+.+.+.||||||||.|+.||+||||.++++.
T Consensus 78 ~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l-~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~ 156 (972)
T KOG0202|consen 78 FDEPFVITLIIVINVTVGFVQEYNAEKALEALKEL-VPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEA 156 (972)
T ss_pred cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhc-CCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEee
Confidence 67899999999999999999999999999999866 57789999999999999999999999999999999999999999
Q ss_pred CcceecCCCCCCCCCeeeecCC------------CCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChh
Q 003371 273 HSLQVDESSMTGESDHVEVDST------------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPL 340 (825)
Q Consensus 273 ~~l~VDES~LTGEs~pv~k~~~------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 340 (825)
.++.||||+|||||.||.|..+ +.+++|+||.|..|.++++|++||.||++|++.+.+.+.++.+|||
T Consensus 157 ~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPL 236 (972)
T KOG0202|consen 157 KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPL 236 (972)
T ss_pred eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcH
Confidence 9999999999999999999632 4578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHH
Q 003371 341 QARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLA 420 (825)
Q Consensus 341 q~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lpla 420 (825)
|++++.+..++.++..++.+.+.++- +.||.. .....+.|....++|..++++.|.|+|||||..
T Consensus 237 qk~ld~~G~qLs~~is~i~v~v~~~n-ig~f~~--------------p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaV 301 (972)
T KOG0202|consen 237 QKKLDEFGKQLSKVISFICVGVWLLN-IGHFLD--------------PVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAV 301 (972)
T ss_pred HHHHHHHHHHHHHHheehhhhHHHhh-hhhhcc--------------ccccccchhchhhhhhHHHHHHHHhccCCCcch
Confidence 99999999999865544433333221 223320 001112234778899999999999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccccc-------------c----
Q 003371 421 VTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQE-------------T---- 483 (825)
Q Consensus 421 vtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~-------------~---- 483 (825)
+|++||.+.+||+|++++||++.++||||.+++||+|||||||+|+|+|.++|+.+...... .
T Consensus 302 vT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~ 381 (972)
T KOG0202|consen 302 VTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFK 381 (972)
T ss_pred hhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEe
Confidence 99999999999999999999999999999999999999999999999999999865422111 0
Q ss_pred -------cccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHH--------------
Q 003371 484 -------YCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDK-------------- 542 (825)
Q Consensus 484 -------~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~-------------- 542 (825)
.....+.+.+++..+ ++|+.+.+... +. +.++..|.|||.||..++. ++|+.-..
T Consensus 382 ~~~~~~~~~~~~~~l~~l~~i~-~lCNda~v~~~-~~-~~~~~~G~pTE~AL~vlae-Km~l~~~~~~~~s~~~~~~c~~ 457 (972)
T KOG0202|consen 382 DGLYEKDKAGDNDLLQELAEIC-ALCNDATVEYN-DA-DCYEKVGEPTEGALIVLAE-KMGLPGTRSTNLSNEEASACNR 457 (972)
T ss_pred cCccccccccccHHHHHHHHHH-HhhhhhhhhcC-ch-hhHHhcCCchHHHHHHHHH-HcCCCcchhhcccccccccchh
Confidence 011233444555444 44545555432 22 5667799999999999998 77765322
Q ss_pred -HhhcceEEEEecCCCCCceeEEEEEecCC-CeEEEEEcCcHHHHHHhcccccccCC-eeecCChhhHHHHHHHHHHHhh
Q 003371 543 -VKQKYSILHVETFNSEKKRSGVLIRRKAD-NTTHIHWKGAAEIILAMCSHYYESNG-VIKSMDGNGRSQMENIIHGMAA 619 (825)
Q Consensus 543 -~~~~~~i~~~~~F~s~~krmsvvv~~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~ 619 (825)
..+.++....+||+|+||+|+|.+..+.+ ..+.+|+|||+|.|+++|++++..+| ...||++..|+.+.+...+|++
T Consensus 458 ~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~ 537 (972)
T KOG0202|consen 458 VYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGS 537 (972)
T ss_pred HHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhh
Confidence 33445677999999999999999987655 35789999999999999998888777 5599999999999999999999
Q ss_pred ccCeEEEEEEeecCc-hhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHH
Q 003371 620 SSLRCIAFAYKQVSE-EETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAI 698 (825)
Q Consensus 620 ~glR~l~lA~k~l~~-~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aI 698 (825)
+|||||+||+++.+. ..+....+....+...|.+|+|+|+||+.||+||+|++||+.|++|||+|+|+||||..||.+|
T Consensus 538 ~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI 617 (972)
T KOG0202|consen 538 EGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAI 617 (972)
T ss_pred ccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHH
Confidence 999999999998763 1111111111234457899999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 003371 699 ATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778 (825)
Q Consensus 699 A~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~A 778 (825)
|+++||...+.+ ....+++|.+|+.++++++.+...+..||||++|++|.+||+.||++|++|||||||+|||||||.|
T Consensus 618 ~r~iGi~~~~ed-~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~A 696 (972)
T KOG0202|consen 618 AREIGIFSEDED-VSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKA 696 (972)
T ss_pred HHHhCCCcCCcc-ccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhc
Confidence 999999886554 4668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccCC
Q 003371 779 DVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFCW 825 (825)
Q Consensus 779 dVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~~ 825 (825)
|||||||++||+|||+|||+||.||||++|+.||++||.+|+||+.|
T Consensus 697 dIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~F 743 (972)
T KOG0202|consen 697 DIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNF 743 (972)
T ss_pred ccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999754
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.6e-127 Score=1177.90 Aligned_cols=716 Identities=42% Similarity=0.678 Sum_probs=628.9
Q ss_pred ccCCCCCCCCCHHHHHHHhcC-CChhHHHhhCCHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHH
Q 003371 82 LVSNSIDPDMDGIRLAEMVKN-KDSHTLSLLGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFV 160 (825)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~~~~-~~~~~l~~~ggv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~ 160 (825)
.....++|++...++.++.+. ++.+.|+++||++++++.|+++.++||+++++++++|+++||+|+++.+++++||+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~ 90 (941)
T TIGR01517 11 RDNFTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIV 90 (941)
T ss_pred hhccCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHH
Confidence 344557899999999999976 5788899999999999999999999999555679999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHhhhccc-----cCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEE
Q 003371 161 LEAFKDTTILILLVCAALSLGFGIK-----EHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEV 235 (825)
Q Consensus 161 ~~~~~~~~~~il~v~a~lsl~~g~~-----~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V 235 (825)
+++|+++++++|++++++|+++++. +++..++|++++.|+++++++++++++++|++++++++|++..++.+++|
T Consensus 91 ~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~V 170 (941)
T TIGR01517 91 WAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAV 170 (941)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEE
Confidence 9999999999999999999998742 34455689999999999999999999999999999999987666789999
Q ss_pred EeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEE
Q 003371 236 VREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVV 315 (825)
Q Consensus 236 ~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~ 315 (825)
+|||++++|++.||||||||.|++||+|||||++++|+.+.||||+|||||.|+.|.+.+.+++|+||.|.+|.++++|+
T Consensus 171 iRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~ 250 (941)
T TIGR01517 171 IRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVT 250 (941)
T ss_pred EECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEE
Confidence 99999999999999999999999999999999999998889999999999999999877778999999999999999999
Q ss_pred EEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhH
Q 003371 316 SVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVF 395 (825)
Q Consensus 316 ~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (825)
+||.+|++||+++++.+.. +++|+|+++++++.++.++++++++++|+++++.++....... .. + .....
T Consensus 251 ~tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~--~~-~------~~~~~ 320 (941)
T TIGR01517 251 AVGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGD--GR-D------TEEDA 320 (941)
T ss_pred EeCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cc-c------cchhh
Confidence 9999999999999987654 5789999999999999999999888888887655443211100 00 0 00011
Q ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEec
Q 003371 396 NAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLG 475 (825)
Q Consensus 396 ~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 475 (825)
..+...|..++++++++||||||+++|+++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|++++..
T Consensus 321 ~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 400 (941)
T TIGR01517 321 QTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIG 400 (941)
T ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEe
Confidence 25677889999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred cccccccc-cccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEec
Q 003371 476 QESIVQET-YCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVET 554 (825)
Q Consensus 476 ~~~~~~~~-~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~ 554 (825)
+..++.+. ....++...+++..++.+|+.+.... +..+..+..|||+|.|+++|+. +.|.+....+..+++++.+|
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~--~~~~~~~~~g~p~e~All~~~~-~~~~~~~~~~~~~~~~~~~p 477 (941)
T TIGR01517 401 EQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVV--DRGGKRAFIGSKTECALLGFLL-LLGRDYQEVRAEEKVVKIYP 477 (941)
T ss_pred cceEecCcccccCCHHHHHHHHHHHHhCCCCcccc--CCCCccccCCCccHHHHHHHHH-HcCCCHHHHHhhchhccccc
Confidence 54332211 11123445667777787887654321 1123346789999999999997 78888877777888999999
Q ss_pred CCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCc
Q 003371 555 FNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSE 634 (825)
Q Consensus 555 F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~ 634 (825)
|+|++|||+++++.+++ ++++|+|||||.|+++|+++.+.+|...++++ .++.+++.+++|+++|+|++++|||+++.
T Consensus 478 F~s~~k~msvv~~~~~~-~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~ 555 (941)
T TIGR01517 478 FNSERKFMSVVVKHSGG-KVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAP 555 (941)
T ss_pred cCCCCCeEEEEEEeCCC-cEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCc
Confidence 99999999999986544 48999999999999999988777888888887 78889999999999999999999999864
Q ss_pred hhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccc
Q 003371 635 EETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKG 714 (825)
Q Consensus 635 ~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~ 714 (825)
++. + .....|++|+|+|+++|+||+||+++++|+.|+++||+|+|+||||+.||.+||++|||.++ ..
T Consensus 556 ~~~--~-----~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~-----~~ 623 (941)
T TIGR01517 556 EEF--P-----RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF-----GG 623 (941)
T ss_pred ccc--c-----cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC-----Cc
Confidence 221 1 11234789999999999999999999999999999999999999999999999999999875 34
Q ss_pred eeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHH
Q 003371 715 EVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKE 794 (825)
Q Consensus 715 ~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~ 794 (825)
.+++|++|++++++++.+.+++..||||++|+||+++|+.||++|++|||||||+||+||||+||||||||++|+|+||+
T Consensus 624 ~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~ 703 (941)
T TIGR01517 624 LAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKE 703 (941)
T ss_pred eEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 795 SSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 795 aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
+||+||+||||++|+++++|||++|+||..
T Consensus 704 aADivL~dd~f~~I~~~i~~gR~~~~ni~k 733 (941)
T TIGR01517 704 ASDIILLDDNFASIVRAVKWGRNVYDNIRK 733 (941)
T ss_pred hCCEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999964
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=4.8e-123 Score=1137.63 Aligned_cols=670 Identities=29% Similarity=0.467 Sum_probs=573.0
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCc
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~ 192 (825)
.++.+.+.|+|+..+||++++ +.+|+++||+|++++++++++|.+++++|.++++++|++++++|++++ .
T Consensus 11 ~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--------~ 80 (1053)
T TIGR01523 11 IADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--------D 80 (1053)
T ss_pred CHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------h
Confidence 578899999999989998866 999999999999999999999999999999999999999999999886 5
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEec
Q 003371 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDG 272 (825)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g 272 (825)
|+|++.|++++++..+++.+++|+.++.+++|.+.. ..+++|+|||++++|++.||||||||.|++||+|||||+|+++
T Consensus 81 ~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~-~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~ 159 (1053)
T TIGR01523 81 WIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLA-SPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIET 159 (1053)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccC-CCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEe
Confidence 999999999999999999999999999999998764 5689999999999999999999999999999999999999999
Q ss_pred CcceecCCCCCCCCCeeeecCC-------------CCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCC----
Q 003371 273 HSLQVDESSMTGESDHVEVDST-------------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSN---- 335 (825)
Q Consensus 273 ~~l~VDES~LTGEs~pv~k~~~-------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~---- 335 (825)
++|.||||+|||||.||.|.+. ..+++|+||.|.+|.++++|++||++|++|++.+++.+...
T Consensus 160 ~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~ 239 (1053)
T TIGR01523 160 KNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQR 239 (1053)
T ss_pred CceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhcccc
Confidence 9999999999999999999742 24689999999999999999999999999999998854321
Q ss_pred -------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccc
Q 003371 336 -------------------------------ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEY 384 (825)
Q Consensus 336 -------------------------------~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~ 384 (825)
.+||||+++++++.+++.+++++++++|++.. + .
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~---~-~----------- 304 (1053)
T TIGR01523 240 PEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK---F-D----------- 304 (1053)
T ss_pred ccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh---h-h-----------
Confidence 24999999999999988887777766665321 1 0
Q ss_pred cCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCcccc
Q 003371 385 NGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTL 464 (825)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~ 464 (825)
.....+..+++++|+++|||||+.+|++++++++||++++++||+++++|+||++|+||+|||||||+
T Consensus 305 ------------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~ 372 (1053)
T TIGR01523 305 ------------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQ 372 (1053)
T ss_pred ------------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCcccc
Confidence 11245667899999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEeccc-cc---------ccc--c---------------------c--------c--c-----CChHHHHHHH
Q 003371 465 NQMKVTKFWLGQE-SI---------VQE--T---------------------Y--------C--K-----IASSIRDLFH 496 (825)
Q Consensus 465 n~m~v~~~~~~~~-~~---------~~~--~---------------------~--------~--~-----~~~~~~~~l~ 496 (825)
|+|+|+++|..+. .+ .+. . . . . .++...+++.
T Consensus 373 N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 452 (1053)
T TIGR01523 373 GKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLE 452 (1053)
T ss_pred ceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 9999999997541 11 000 0 0 0 0 0012233444
Q ss_pred HHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchH------HH-------------------hhcceEEE
Q 003371 497 QGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMD------KV-------------------KQKYSILH 551 (825)
Q Consensus 497 ~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~------~~-------------------~~~~~i~~ 551 (825)
..++|+.+..... +..+.....|||+|.||+.|+. +.|.+.. .. +..|++++
T Consensus 453 -~~~lcn~a~~~~~-~~~~~~~~~GdptE~ALl~~a~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (1053)
T TIGR01523 453 -TAALANIATVFKD-DATDCWKAHGDPTEIAIHVFAK-KFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIA 529 (1053)
T ss_pred -HHHhccCCeeecc-CCCCceeeCcCccHHHHHHHHH-HcCCCcccccchhhhhhhccccccccccccccccccccceEE
Confidence 4445554444321 1223345679999999999997 7776421 11 23578999
Q ss_pred EecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCC-eeecCChhhHHHHHHHHHHHhhccCeEEEEEEe
Q 003371 552 VETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNG-VIKSMDGNGRSQMENIIHGMAASSLRCIAFAYK 630 (825)
Q Consensus 552 ~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k 630 (825)
.+||+|+||||+++++.++++.+++|+|||||.|+++|+++...+| ...+++++.++.+.+.+++|+++|+|||+||||
T Consensus 530 ~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r 609 (1053)
T TIGR01523 530 EFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASK 609 (1053)
T ss_pred EeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEE
Confidence 9999999999999998765555889999999999999998766555 567999999999999999999999999999999
Q ss_pred ecCchhhcccchhH---HhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccc
Q 003371 631 QVSEEETAYNNDVK---ARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRL 707 (825)
Q Consensus 631 ~l~~~e~~~~~~~~---~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~ 707 (825)
+++.++.... ... ..++..|++|+|+|+++|+||+||+++++|+.|++|||+|+|+|||++.||.+||++|||+..
T Consensus 610 ~l~~~~~~~~-~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~ 688 (1053)
T TIGR01523 610 SFDKADNNDD-QLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPP 688 (1053)
T ss_pred ECCchhccch-hhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence 9865321100 000 112346899999999999999999999999999999999999999999999999999999864
Q ss_pred ccc-----cccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 003371 708 DQQ-----VEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 708 ~~~-----~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi 782 (825)
+.. .....+++|++++.++++++.+.+.+..||||++|+||+++|+.||++|++|+|||||+||+|||++|||||
T Consensus 689 ~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGI 768 (1053)
T TIGR01523 689 NFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGI 768 (1053)
T ss_pred cccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccE
Confidence 211 113579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 783 SMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 783 amg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
|||++|+++||++||+||+||||++|+++++|||++|+||..
T Consensus 769 Amg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k 810 (1053)
T TIGR01523 769 AMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMK 810 (1053)
T ss_pred ecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999964
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-122 Score=1118.51 Aligned_cols=657 Identities=36% Similarity=0.576 Sum_probs=580.1
Q ss_pred HHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchh
Q 003371 116 GVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYE 195 (825)
Q Consensus 116 ~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d 195 (825)
.+...+.++...||+.++ +.+|++.||.|+++..+..++|..++.+|.+++.++|++++++|++++....+. .+
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 556677888899999954 999999999999999999999999999999999999999999999887311100 45
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcc
Q 003371 196 GGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSL 275 (825)
Q Consensus 196 ~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l 275 (825)
...|+..+++..++..+++|+.++..++|.+.. ..+++|+|||++++|+++||||||||.|++||+||||+++++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 567788888888889999999999999998764 7899999999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCCCeeeecC------------CCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHH
Q 003371 276 QVDESSMTGESDHVEVDS------------TNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQAR 343 (825)
Q Consensus 276 ~VDES~LTGEs~pv~k~~------------~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~ 343 (825)
.||||+|||||.|+.|.+ ...+++|+||.|..|.+.++|++||++|+.|++...+.......||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 999999999999999973 34689999999999999999999999999999999998776789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHH
Q 003371 344 LDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTL 423 (825)
Q Consensus 344 l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl 423 (825)
++++...+..+++++++++|++. ++.+.. .+...|+.++++++.++|+|||+.+++
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~---~~~~~~---------------------~~~~~~~~~v~l~va~IPegLp~~vti 320 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVG---LFRGGN---------------------GLLESFLTALALAVAAVPEGLPAVVTI 320 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHhcCc---------------------cHHHHHHHHHHHHHhccccchHHHHHH
Confidence 99999999998888888777765 222210 256789999999999999999999999
Q ss_pred HHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecc--ccccccccccCChHHHHHHHHHHhh
Q 003371 424 TLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQ--ESIVQETYCKIASSIRDLFHQGVGL 501 (825)
Q Consensus 424 ~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~i~~ 501 (825)
++++++++|.+++++||+++++|+||++++||||||||||+|+|+|.++|..+ ...+ +.....++...+++ ..+++
T Consensus 321 ~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~-~~~~~~~~~~~~~l-~~~~l 398 (917)
T COG0474 321 ALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID-DKDLKDSPALLRFL-LAAAL 398 (917)
T ss_pred HHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc-ccccccchHHHHHH-HHHHh
Confidence 99999999999999999999999999999999999999999999999999984 2222 11111222233333 34456
Q ss_pred cCCccccccCCCCCcceecCChhHHHHHHHHHHHcCC--chHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEc
Q 003371 502 NTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGM--EMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWK 579 (825)
Q Consensus 502 n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~--~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~K 579 (825)
|++..... + + ++..|||+|.||++++. +.|. +....+..+++++.+||+|+||||+|+++..+++ +.+++|
T Consensus 399 c~~~~~~~---~-~-~~~~gdptE~Al~~~a~-~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~-~~~~~K 471 (917)
T COG0474 399 CNSVTPEK---N-G-WYQAGDPTEGALVEFAE-KLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGK-YILFVK 471 (917)
T ss_pred cCcccccc---c-C-ceecCCccHHHHHHHHH-hcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCc-EEEEEc
Confidence 66554432 2 2 67899999999999998 8888 8888888899999999999999999999865555 899999
Q ss_pred CcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeee
Q 003371 580 GAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGI 659 (825)
Q Consensus 580 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~ 659 (825)
||||.|+++|+++ |...+++++.++.++...++|+++|||++++|||.++..+.... . ...|++|+|+|+
T Consensus 472 GApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~-----~-~~~E~dl~~lGl 541 (917)
T COG0474 472 GAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDE-----V-DEIESDLVFLGL 541 (917)
T ss_pred CChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccch-----h-hhhhccceeehh
Confidence 9999999999987 77889999999999999999999999999999997755222111 1 567899999999
Q ss_pred ecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeE
Q 003371 660 VGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (825)
Q Consensus 660 v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V 739 (825)
++|+||+|++|+++|+.|++|||+|||+||||+.||++||++|||...... ..+++|.+++.++++++.+.+++..|
T Consensus 542 ~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~---~~vi~G~el~~l~~~el~~~~~~~~V 618 (917)
T COG0474 542 TGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAES---ALVIDGAELDALSDEELAELVEELSV 618 (917)
T ss_pred hhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCc---eeEeehHHhhhcCHHHHHHHhhhCcE
Confidence 999999999999999999999999999999999999999999999875211 56999999999999999999999999
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhh
Q 003371 740 MARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLH 819 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~ 819 (825)
|||+||+||.++|+.||++|++|||||||+|||||||+||||||||..|||+||++||||++||||++|+.+++|||++|
T Consensus 619 fARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~ 698 (917)
T COG0474 619 FARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVY 698 (917)
T ss_pred EEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCC
Q 003371 820 SGCFCW 825 (825)
Q Consensus 820 ~ni~~~ 825 (825)
+||..|
T Consensus 699 ~ni~k~ 704 (917)
T COG0474 699 VNIKKF 704 (917)
T ss_pred HHHHHH
Confidence 999653
No 6
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=7.7e-118 Score=1095.01 Aligned_cols=680 Identities=27% Similarity=0.417 Sum_probs=579.3
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhh-cccc----C
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGF-GIKE----H 187 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~-g~~~----~ 187 (825)
.++++.+.|+++..+||++++ +.+|+++||+|++++++++++|++++++|.+++.++|++++++++++ ++.. +
T Consensus 21 ~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~ 98 (997)
T TIGR01106 21 SLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEE 98 (997)
T ss_pred CHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCC
Confidence 688899999999999999866 99999999999999988999999999999999999999999998765 3321 1
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceE
Q 003371 188 GAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADG 267 (825)
Q Consensus 188 g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDg 267 (825)
.....|++++.|++.+++..++..+.+++.++..++|.+. .+.+++|+|||++++|++.||||||+|.|++||+|||||
T Consensus 99 ~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~-~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~ 177 (997)
T TIGR01106 99 PQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNM-VPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADL 177 (997)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeE
Confidence 1224689998888877777788888888888888888755 456899999999999999999999999999999999999
Q ss_pred EEEecCcceecCCCCCCCCCeeeecCCC--------CceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCCh
Q 003371 268 LFLDGHSLQVDESSMTGESDHVEVDSTN--------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTP 339 (825)
Q Consensus 268 ili~g~~l~VDES~LTGEs~pv~k~~~~--------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 339 (825)
++++|+++.||||+|||||.|+.|.+.. .+++|+||.|.+|.+.++|++||.+|.+|++.+.+.+...+++|
T Consensus 178 ~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~p 257 (997)
T TIGR01106 178 RIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTP 257 (997)
T ss_pred EEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCc
Confidence 9999988899999999999999997532 25799999999999999999999999999999998877788899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhH
Q 003371 340 LQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPL 419 (825)
Q Consensus 340 lq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lpl 419 (825)
+|+++++++..+..+++++++++|+++++ .+. .+...+..++++++++||||||+
T Consensus 258 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----------------------~~~~~~~~~i~v~v~~iP~~L~~ 312 (997)
T TIGR01106 258 IAIEIEHFIHIITGVAVFLGVSFFILSLI---LGY----------------------TWLEAVIFLIGIIVANVPEGLLA 312 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcC----------------------CHHHHHHHHHHHHhhcCCccchH
Confidence 99999999999998888777766665422 221 34456778899999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccccccc-------ccCChHHH
Q 003371 420 AVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETY-------CKIASSIR 492 (825)
Q Consensus 420 avtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~-------~~~~~~~~ 492 (825)
++++++++++++|+++|++||+++++|+||++++||||||||||+|+|+|.++|+++..+..+.. ........
T Consensus 313 ~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (997)
T TIGR01106 313 TVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATW 392 (997)
T ss_pred HHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHH
Confidence 99999999999999999999999999999999999999999999999999999987654432110 00111233
Q ss_pred HHHHHHHhhcCCccccccCCCCC----cceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEe
Q 003371 493 DLFHQGVGLNTTGSVSKLKPGSS----VAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRR 568 (825)
Q Consensus 493 ~~l~~~i~~n~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~ 568 (825)
+.+...+++|+++.... +..+ .....|+|+|.||++|+. +.+.+....+..++.++.+||+|+||||++++..
T Consensus 393 ~~ll~~~alcn~~~~~~--~~~~~~~~~~~~~gdp~E~ALl~~a~-~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~ 469 (997)
T TIGR01106 393 LALSRIAGLCNRAVFKA--GQENVPILKRAVAGDASESALLKCIE-LCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHEN 469 (997)
T ss_pred HHHHHHHHHcCCCeecc--ccCCCcccccccCcChHHHHHHHHHH-HhCCCHHHHHhhCceeEEeccCCCCceEEEEEec
Confidence 33445566666554432 1111 235679999999999997 5566677788889999999999999999998764
Q ss_pred c--CCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhH-H
Q 003371 569 K--ADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVK-A 645 (825)
Q Consensus 569 ~--~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~-~ 645 (825)
. +++.+++|+|||||.|+++|++++ .+|...+++++.++.+++.+++|+++|+||+++|||+++.++........ .
T Consensus 470 ~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~ 548 (997)
T TIGR01106 470 EDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTD 548 (997)
T ss_pred cCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccch
Confidence 3 234588999999999999999876 57888999999999999999999999999999999998653211100000 1
Q ss_pred hhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc---------------
Q 003371 646 RQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ--------------- 710 (825)
Q Consensus 646 ~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~--------------- 710 (825)
..+..|++|+|+|+++++||+||+++++|++|+++||+|+|+|||++.||.++|+++||+.++..
T Consensus 549 ~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~ 628 (997)
T TIGR01106 549 DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQ 628 (997)
T ss_pred hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccc
Confidence 11234889999999999999999999999999999999999999999999999999999865321
Q ss_pred ----cccceeeechhhhcCCHHHHHhhccCee--EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEec
Q 003371 711 ----VEKGEVVEGVEFRNYTDEERIQKVDKIR--VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM 784 (825)
Q Consensus 711 ----~~~~~vi~G~~~~~~~~~~~~~~~~~~~--V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiam 784 (825)
.....+++|++++.++++++.+.+++.. ||||++|+||+++|+.||+.|++|||||||+||+||||+|||||||
T Consensus 629 ~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam 708 (997)
T TIGR01106 629 VNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 708 (997)
T ss_pred cccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec
Confidence 0113799999999999999999998765 9999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 785 GIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 785 g~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
|++|+|+||++||+||+||||++|+++++|||++|+||..
T Consensus 709 g~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k 748 (997)
T TIGR01106 709 GIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKK 748 (997)
T ss_pred CCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999964
No 7
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=7.5e-118 Score=1078.91 Aligned_cols=633 Identities=27% Similarity=0.416 Sum_probs=555.6
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCc
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~ 192 (825)
..+.+.+.|+++. +||+++| +++|+++||+|+++.++++++|+++|++|+++++++|++++++|++++ .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 5778888899986 6999865 999999999999999999999999999999999999999999999876 5
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeC------CEEEEEEecCcccCeEEEeCCCCeeece
Q 003371 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVRE------ARRLQISIFDLVVGDIVFLKIGDQIPAD 266 (825)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~------g~~~~I~~~dLvvGDIV~l~~Gd~VPaD 266 (825)
|++++.|++.+++..+++.+++++.++..++|.+.. +.+++|+|| |++++|+++||||||||.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 899999999999999999999999999999998764 567999999 7899999999999999999999999999
Q ss_pred EEEEecCcceecCCCCCCCCCeeeecCCC-----------CceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCC
Q 003371 267 GLFLDGHSLQVDESSMTGESDHVEVDSTN-----------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSN 335 (825)
Q Consensus 267 gili~g~~l~VDES~LTGEs~pv~k~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 335 (825)
|++++|+++.||||+|||||.||.|.+.. ++.+|+||.|.+|.++++|++||.+|++|++.+.+.+...
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999998999999999999999997532 3589999999999999999999999999999999988888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhcc
Q 003371 336 ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPE 415 (825)
Q Consensus 336 ~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~ 415 (825)
+++|+|+.+++++.++..++++++.++++++. +.+. .+...+..++++++++|||
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~---~~~~----------------------~~~~~l~~alsv~V~~~Pe 335 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLING---YTKG----------------------DWWEAALFALSVAVGLTPE 335 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH---HhcC----------------------CHHHHHHHHHHHHHHHccc
Confidence 89999999999999998887777766655432 2110 3456778899999999999
Q ss_pred chhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHH
Q 003371 416 GLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLF 495 (825)
Q Consensus 416 ~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l 495 (825)
|||+++++++++++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++.... .+ ..+++
T Consensus 336 ~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~---------~~--~~~ll 404 (902)
T PRK10517 336 MLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG---------KT--SERVL 404 (902)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC---------CC--HHHHH
Confidence 99999999999999999999999999999999999999999999999999999998642111 00 11222
Q ss_pred HHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEE
Q 003371 496 HQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTH 575 (825)
Q Consensus 496 ~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~ 575 (825)
...++|+... ...|||+|.|++.++. ..+ .......++.++.+||+|++|+|+++++..++. ++
T Consensus 405 -~~a~l~~~~~-----------~~~~~p~d~All~~a~-~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~-~~ 468 (902)
T PRK10517 405 -HSAWLNSHYQ-----------TGLKNLLDTAVLEGVD-EES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEH-HQ 468 (902)
T ss_pred -HHHHhcCCcC-----------CCCCCHHHHHHHHHHH-hcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCe-EE
Confidence 2233443211 1258999999999886 322 223455688899999999999999998765443 77
Q ss_pred EEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeE
Q 003371 576 IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLT 655 (825)
Q Consensus 576 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~ 655 (825)
+++|||||.|+++|+++.. +|...+++++.++.+.+.+++|+++|+|++++|||+++.++.. .....|+|++
T Consensus 469 ~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~-------~~~~~e~~l~ 540 (902)
T PRK10517 469 LICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGD-------YQRADESDLI 540 (902)
T ss_pred EEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccc-------cccccccCce
Confidence 9999999999999998754 6777899999999999999999999999999999988542211 0111367999
Q ss_pred EeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhcc
Q 003371 656 LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVD 735 (825)
Q Consensus 656 llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~ 735 (825)
|+|+++|+||+||+++++|++|+++||+|+|+||||+.||.+||++|||.. ..+++|++++.++++++.+.++
T Consensus 541 ~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~-------~~v~~G~el~~l~~~el~~~~~ 613 (902)
T PRK10517 541 LEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA-------GEVLIGSDIETLSDDELANLAE 613 (902)
T ss_pred eeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-------cCceeHHHHHhCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999952 3589999999999999999999
Q ss_pred CeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHh
Q 003371 736 KIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815 (825)
Q Consensus 736 ~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~g 815 (825)
+..||||++|+||+++|+.||++|++|||||||+|||||||+|||||||| +|||+||++|||||+||||++|+++++||
T Consensus 614 ~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~g 692 (902)
T PRK10517 614 RTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEG 692 (902)
T ss_pred hCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhccccCC
Q 003371 816 DQLHSGCFCW 825 (825)
Q Consensus 816 R~i~~ni~~~ 825 (825)
|++|+||.+|
T Consensus 693 R~i~~nI~k~ 702 (902)
T PRK10517 693 RRTFANMLKY 702 (902)
T ss_pred HHHHHHHHHH
Confidence 9999999764
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.5e-117 Score=1078.16 Aligned_cols=642 Identities=26% Similarity=0.399 Sum_probs=557.7
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhcccc---CCC
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKE---HGA 189 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~---~g~ 189 (825)
..+.+.+.|+++ .+||++++ +++|+++||+|+++.++++++|.+++++|++++.++|++++++|++++... ++.
T Consensus 31 ~~~~v~~~l~~~-~~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 107 (903)
T PRK15122 31 SLEETLANLNTH-RQGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGE 107 (903)
T ss_pred CHHHHHHHhCCC-CCCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 567788889998 47998866 999999999999999999999999999999999999999999999887432 223
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeC------CEEEEEEecCcccCeEEEeCCCCee
Q 003371 190 EEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVRE------ARRLQISIFDLVVGDIVFLKIGDQI 263 (825)
Q Consensus 190 ~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~------g~~~~I~~~dLvvGDIV~l~~Gd~V 263 (825)
...|++++.|++.+++..+++.+++|+.++..++|.+.. +..++|+|| |++++|+++||||||+|.|++||+|
T Consensus 108 ~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 108 ETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 346999999999999999999999999999999998764 567999999 4899999999999999999999999
Q ss_pred eceEEEEecCcceecCCCCCCCCCeeeecCC---------------------CCceeeeCceeeeceEEEEEEEEcccch
Q 003371 264 PADGLFLDGHSLQVDESSMTGESDHVEVDST---------------------NNPFLFSGSKVADGYAQMLVVSVGMNTA 322 (825)
Q Consensus 264 PaDgili~g~~l~VDES~LTGEs~pv~k~~~---------------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~ 322 (825)
||||++++|+++.||||+|||||.||.|.+. .++.+|+||.|.+|.++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 9999999999999999999999999999741 1378999999999999999999999999
Q ss_pred HHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHH
Q 003371 323 WGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIV 402 (825)
Q Consensus 323 ~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (825)
+|++.+++.+ ...++|+|+++++++.++..+++.++.+++++. ++... .+...+
T Consensus 267 ~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~---~~~~~----------------------~~~~~l 320 (903)
T PRK15122 267 FGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN---GFTKG----------------------DWLEAL 320 (903)
T ss_pred hhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh---hhccC----------------------CHHHHH
Confidence 9999999876 667899999999999988887766655444332 11110 345677
Q ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccccc
Q 003371 403 AAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQE 482 (825)
Q Consensus 403 ~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 482 (825)
..++++++++||||||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..... .
T Consensus 321 ~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-~-- 397 (903)
T PRK15122 321 LFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-K-- 397 (903)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-C--
Confidence 8899999999999999999999999999999999999999999999999999999999999999999998743221 0
Q ss_pred ccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCcee
Q 003371 483 TYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRS 562 (825)
Q Consensus 483 ~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krm 562 (825)
.+ +++.. .++|+.. . ..+|||+|.|++.|+. +.+.+ ..+..++.++.+||++.+|+|
T Consensus 398 -----~~---~~l~~-a~l~s~~--~---------~~~~~p~e~All~~a~-~~~~~--~~~~~~~~~~~~pF~s~~k~m 454 (903)
T PRK15122 398 -----DE---RVLQL-AWLNSFH--Q---------SGMKNLMDQAVVAFAE-GNPEI--VKPAGYRKVDELPFDFVRRRL 454 (903)
T ss_pred -----hH---HHHHH-HHHhCCC--C---------CCCCChHHHHHHHHHH-HcCch--hhhhcCceEEEeeeCCCcCEE
Confidence 11 22222 2234211 0 1268999999999997 55532 234567889999999999999
Q ss_pred EEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccch
Q 003371 563 GVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNND 642 (825)
Q Consensus 563 svvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~ 642 (825)
+++++..+++ +++++|||||.|+++|+++.. +|...+++++.++++.+.+++|+.+|+|++++|||+++.++...
T Consensus 455 s~v~~~~~~~-~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~--- 529 (903)
T PRK15122 455 SVVVEDAQGQ-HLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRA--- 529 (903)
T ss_pred EEEEEcCCCc-EEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCcccccc---
Confidence 9998765554 789999999999999998754 67788999999999999999999999999999999885422100
Q ss_pred hHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhh
Q 003371 643 VKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEF 722 (825)
Q Consensus 643 ~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~ 722 (825)
......|+|++|+|+++|+||+||+++++|++|+++||+|+|+||||+.||.+||++|||.. ..+++|+++
T Consensus 530 --~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~-------~~vi~G~el 600 (903)
T PRK15122 530 --QYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP-------GEPLLGTEI 600 (903)
T ss_pred --ccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC-------CCccchHhh
Confidence 01112467999999999999999999999999999999999999999999999999999953 358999999
Q ss_pred hcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeecc
Q 003371 723 RNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILD 802 (825)
Q Consensus 723 ~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlld 802 (825)
+.++++++.+.+++..||||++|+||+++|+.||++|++|||||||+|||||||+|||||||| +|||+||++|||||+|
T Consensus 601 ~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLld 679 (903)
T PRK15122 601 EAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLE 679 (903)
T ss_pred hhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999 8999999999999999
Q ss_pred CCchHHHHHHHHhHHhhccccCC
Q 003371 803 DDFTSVATVLSPGDQLHSGCFCW 825 (825)
Q Consensus 803 d~f~sIv~~i~~gR~i~~ni~~~ 825 (825)
|||++|+++++|||++|+||..|
T Consensus 680 d~f~~Iv~ai~~gR~i~~nI~k~ 702 (903)
T PRK15122 680 KSLMVLEEGVIKGRETFGNIIKY 702 (903)
T ss_pred CChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999754
No 9
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=4.9e-117 Score=1072.74 Aligned_cols=632 Identities=26% Similarity=0.401 Sum_probs=556.1
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCc
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEG 192 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~ 192 (825)
.++++.+.|+++. +||++++ +.+|+++||+|++++++++++|++++++|.++++++|++++++|++++ .
T Consensus 19 ~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~--------~ 87 (867)
T TIGR01524 19 GKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD--------D 87 (867)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------h
Confidence 6889999999985 6998865 999999999999999988899999999999999999999999999875 5
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEe------CCEEEEEEecCcccCeEEEeCCCCeeece
Q 003371 193 WYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVR------EARRLQISIFDLVVGDIVFLKIGDQIPAD 266 (825)
Q Consensus 193 ~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R------~g~~~~I~~~dLvvGDIV~l~~Gd~VPaD 266 (825)
|++++.|++.+++..++..+.+++.++..++|.+.. +..++|+| ||++++|+++||||||||.|++||+||||
T Consensus 88 ~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 88 LEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 899999999999999999999999999999998764 46899999 99999999999999999999999999999
Q ss_pred EEEEecCcceecCCCCCCCCCeeeecCCC-----------CceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCC
Q 003371 267 GLFLDGHSLQVDESSMTGESDHVEVDSTN-----------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSN 335 (825)
Q Consensus 267 gili~g~~l~VDES~LTGEs~pv~k~~~~-----------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~ 335 (825)
|++++|+++.||||+|||||.|+.|.+.. ++++|+||.|.+|.++++|++||.+|++|++.+.+.+ ..
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~~ 245 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-RR 245 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-CC
Confidence 99999998999999999999999997532 3689999999999999999999999999999999977 67
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhcc
Q 003371 336 ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPE 415 (825)
Q Consensus 336 ~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~ 415 (825)
.++|+|+++++++.++..+++++++++|+++. +.+. .+...+..++++++++|||
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~---~~~~----------------------~~~~~~~~al~l~v~~iP~ 300 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLMING---LMKG----------------------DWLEAFLFALAVAVGLTPE 300 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHheehHH---HhcC----------------------CHHHHHHHHHHHHHHhCcc
Confidence 78999999999999999888887776665532 1110 3456788899999999999
Q ss_pred chhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHH
Q 003371 416 GLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLF 495 (825)
Q Consensus 416 ~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l 495 (825)
|||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|++++..... . ..+++
T Consensus 301 ~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~---------~--~~~~l 369 (867)
T TIGR01524 301 MLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE---------T--SERVL 369 (867)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC---------C--HHHHH
Confidence 999999999999999999999999999999999999999999999999999999997632110 0 11222
Q ss_pred HHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEE
Q 003371 496 HQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTH 575 (825)
Q Consensus 496 ~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~ 575 (825)
. .+++|+... ..++||+|+|++.++. +. .....+..++.++.+||+|++|+|+++++..++ .++
T Consensus 370 ~-~a~l~~~~~-----------~~~~~p~~~Al~~~~~-~~--~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~-~~~ 433 (867)
T TIGR01524 370 K-MAWLNSYFQ-----------TGWKNVLDHAVLAKLD-ES--AARQTASRWKKVDEIPFDFDRRRLSVVVENRAE-VTR 433 (867)
T ss_pred H-HHHHhCCCC-----------CCCCChHHHHHHHHHH-hh--chhhHhhcCceEEEeccCCCcCEEEEEEEcCCc-eEE
Confidence 2 223343210 1257999999999986 32 223445678889999999999999999875443 478
Q ss_pred EEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeE
Q 003371 576 IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLT 655 (825)
Q Consensus 576 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~ 655 (825)
+++|||||.++++|+++.. +|...+++++.++.+++.+++|+++|+|++++|||+++.++... ....|++|+
T Consensus 434 ~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~-------~~~~e~~l~ 505 (867)
T TIGR01524 434 LICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADF-------TKTDEEQLI 505 (867)
T ss_pred EEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccc-------cccccCCcE
Confidence 9999999999999997754 67778999988999999999999999999999999886522110 111367999
Q ss_pred EeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhcc
Q 003371 656 LLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVD 735 (825)
Q Consensus 656 llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~ 735 (825)
|+|+++|+||+||+++++|++|+++||+|+|+||||+.||.+||+++||.. ..+++|.+++.++++++.+.++
T Consensus 506 ~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~-------~~v~~g~~l~~~~~~el~~~~~ 578 (867)
T TIGR01524 506 IEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA-------NDFLLGADIEELSDEELARELR 578 (867)
T ss_pred EEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-------CCeeecHhhhhCCHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999963 2589999999999999999999
Q ss_pred CeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHh
Q 003371 736 KIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815 (825)
Q Consensus 736 ~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~g 815 (825)
+..||||++|+||+++|+.||++|++|||||||+||+|||++|||||||| +|||+||++|||||+||||++|+++++||
T Consensus 579 ~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~g 657 (867)
T TIGR01524 579 KYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEG 657 (867)
T ss_pred hCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 89999999999999999999999999999
Q ss_pred HHhhccccCC
Q 003371 816 DQLHSGCFCW 825 (825)
Q Consensus 816 R~i~~ni~~~ 825 (825)
|++|+||..|
T Consensus 658 R~i~~ni~k~ 667 (867)
T TIGR01524 658 RNTFGNILKY 667 (867)
T ss_pred HHHHHHHHHH
Confidence 9999999753
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=3e-116 Score=1072.12 Aligned_cols=645 Identities=34% Similarity=0.540 Sum_probs=568.3
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHh-hhHHHHHHHHHHHHHhhhccccCCCCC
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAF-KDTTILILLVCAALSLGFGIKEHGAEE 191 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~-~~~~~~il~v~a~lsl~~g~~~~g~~~ 191 (825)
.++++.+.|+++..+||+++ +++++|++.||+|+++.++++++|++++++| +++++++|++++++|+++|
T Consensus 8 ~~~~v~~~l~t~~~~GLs~~-~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g-------- 78 (884)
T TIGR01522 8 SVEETCSKLQTDLQNGLNSS-QEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG-------- 78 (884)
T ss_pred CHHHHHHHhCcCcccCCCcH-HHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc--------
Confidence 68999999999999999833 3599999999999999998899999999999 9999999999999999887
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEe
Q 003371 192 GWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLD 271 (825)
Q Consensus 192 ~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~ 271 (825)
.|.|++.|+++++++++++.+++|+.++.+++|.+. .+.+++|+|||++++|+++||||||||.|++||+|||||++++
T Consensus 79 ~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~ 157 (884)
T TIGR01522 79 NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVE 157 (884)
T ss_pred chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEE
Confidence 599999999889999999999999999999999866 4567999999999999999999999999999999999999999
Q ss_pred cCcceecCCCCCCCCCeeeecCCC------------CceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCCh
Q 003371 272 GHSLQVDESSMTGESDHVEVDSTN------------NPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTP 339 (825)
Q Consensus 272 g~~l~VDES~LTGEs~pv~k~~~~------------~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tp 339 (825)
|+.+.||||+|||||.|+.|.+.. ++++|+||.|.+|.++++|++||.+|++|++.+.+.+....++|
T Consensus 158 g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~ 237 (884)
T TIGR01522 158 AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTP 237 (884)
T ss_pred cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCc
Confidence 988899999999999999998532 36899999999999999999999999999999999888888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhH
Q 003371 340 LQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPL 419 (825)
Q Consensus 340 lq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lpl 419 (825)
+|+.+++++.++..++++++++++++ .|+.+. .+...+..++++++++||||||+
T Consensus 238 lq~~l~~l~~~~~~~~~~~~~~~~~~---~~~~~~----------------------~~~~~~~~~v~llv~aiP~~Lp~ 292 (884)
T TIGR01522 238 LQKSMDLLGKQLSLVSFGVIGVICLV---GWFQGK----------------------DWLEMFTISVSLAVAAIPEGLPI 292 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcC----------------------CHHHHHHHHHHHHHHHccchHHH
Confidence 99999999999988776555444333 233221 35567888999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccc--------cc--------
Q 003371 420 AVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQ--------ET-------- 483 (825)
Q Consensus 420 avtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~--------~~-------- 483 (825)
++|++++++++||+++|++||+++++|+||++|+||||||||||+|+|+|.++|..+..... ..
T Consensus 293 ~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (884)
T TIGR01522 293 IVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDV 372 (884)
T ss_pred HHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccc
Confidence 99999999999999999999999999999999999999999999999999999876532110 00
Q ss_pred -cccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCcee
Q 003371 484 -YCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRS 562 (825)
Q Consensus 484 -~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krm 562 (825)
....++...+++..+..|| .+.... .+ ....|||+|+|+++++. +.|.+ ..+..++.++.+||+|++|||
T Consensus 373 ~~~~~~~~~~~~l~~~~l~~-~~~~~~---~~--~~~~g~p~e~All~~~~-~~~~~--~~~~~~~~~~~~pF~s~~k~m 443 (884)
T TIGR01522 373 LHGFYTVAVSRILEAGNLCN-NAKFRN---EA--DTLLGNPTDVALIELLM-KFGLD--DLRETYIRVAEVPFSSERKWM 443 (884)
T ss_pred cccccCHHHHHHHHHHhhhC-CCeecC---CC--CCcCCChHHHHHHHHHH-HcCcH--hHHhhCcEEeEeCCCCCCCeE
Confidence 0001223344554444333 333221 11 13468999999999997 66653 445568899999999999999
Q ss_pred EEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccch
Q 003371 563 GVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNND 642 (825)
Q Consensus 563 svvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~ 642 (825)
+++++...++++++|+|||||.|+..|++++..+|...+++++.++.+.+.+++|+.+|+|++++||++++
T Consensus 444 ~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~~--------- 514 (884)
T TIGR01522 444 AVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEK--------- 514 (884)
T ss_pred EEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCC---------
Confidence 99988754556889999999999999999988788888999999999999999999999999999998762
Q ss_pred hHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhh
Q 003371 643 VKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEF 722 (825)
Q Consensus 643 ~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~ 722 (825)
++|+|+|+++++||+|||++++|+.|+++||+|+|+|||+..||.+||++|||... ...+++|+++
T Consensus 515 ---------~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~-----~~~~v~g~~l 580 (884)
T TIGR01522 515 ---------GQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK-----TSQSVSGEKL 580 (884)
T ss_pred ---------CCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC-----CCceeEhHHh
Confidence 37999999999999999999999999999999999999999999999999999864 3457899999
Q ss_pred hcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeecc
Q 003371 723 RNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILD 802 (825)
Q Consensus 723 ~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlld 802 (825)
+.++++++.+.+++..||||++|+||..+|+.||++|++|+|||||+||+|||++||||||||.+|+++||++||++|+|
T Consensus 581 ~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~d 660 (884)
T TIGR01522 581 DAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTD 660 (884)
T ss_pred HhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred CCchHHHHHHHHhHHhhccccC
Q 003371 803 DDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 803 d~f~sIv~~i~~gR~i~~ni~~ 824 (825)
|||++|+++++|||++|+||..
T Consensus 661 d~~~~i~~~i~~gR~~~~ni~k 682 (884)
T TIGR01522 661 DDFATILSAIEEGKGIFNNIKN 682 (884)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999864
No 11
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=9.1e-113 Score=1023.20 Aligned_cols=599 Identities=26% Similarity=0.405 Sum_probs=526.3
Q ss_pred CCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHH
Q 003371 128 GINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVI 207 (825)
Q Consensus 128 Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~ 207 (825)
||++++ +++|+++||+|+++++ ++++|..++++|.+++.++|++++++|+++| .|+|++.|++.+++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~~-~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPEK-KVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCCC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 787765 9999999999999975 4567899999999999999999999999887 5999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCC
Q 003371 208 VVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESD 287 (825)
Q Consensus 208 ~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~ 287 (825)
.++.+++|+.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 99999999999999998755 46789999999999999999999999999999999999999999978999999999999
Q ss_pred eeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003371 288 HVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLL 367 (825)
Q Consensus 288 pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~ 367 (825)
||.|. .++.+|+||.|.+|.++++|++||.+|++|++.+++.+....++|+|+.+++++.++..+.++++++++++++
T Consensus 149 PV~K~--~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~ 226 (755)
T TIGR01647 149 PVTKK--TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLF 226 (755)
T ss_pred ceEec--cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 5789999999999999999999999999999999998888888999999999999998887777776666543
Q ss_pred HHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhc
Q 003371 368 ARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACET 447 (825)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~ 447 (825)
.. .+. .+...+..++++++++|||+||+++++++++++++|+|+|++||+++++|+
T Consensus 227 ~~--~~~----------------------~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~ 282 (755)
T TIGR01647 227 FG--RGE----------------------SFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEE 282 (755)
T ss_pred HH--cCC----------------------CHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHh
Confidence 20 110 455678889999999999999999999999999999999999999999999
Q ss_pred ccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHH
Q 003371 448 MGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKA 527 (825)
Q Consensus 448 lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~A 527 (825)
||++|+||||||||||+|+|+|.+++..+..++ + .+++..+. +++. +.++||+|+|
T Consensus 283 lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~--------~--~~~l~~a~-~~~~-------------~~~~~pi~~A 338 (755)
T TIGR01647 283 LAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD--------K--DDVLLYAA-LASR-------------EEDQDAIDTA 338 (755)
T ss_pred ccCCcEEEecCCCccccCceEEEEEEecCCCCC--------H--HHHHHHHH-HhCC-------------CCCCChHHHH
Confidence 999999999999999999999999987542111 1 12333332 2221 1257999999
Q ss_pred HHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhH
Q 003371 528 VLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGR 607 (825)
Q Consensus 528 ll~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~ 607 (825)
+++++. +.+ ..+..+++++.+||++.+|+|+++++..++++.+.++||+||.++++|++. ++.+
T Consensus 339 i~~~~~-~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~ 402 (755)
T TIGR01647 339 VLGSAK-DLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIE 402 (755)
T ss_pred HHHHHH-HhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHH
Confidence 999886 322 334568889999999999999998876543446678999999999999742 3456
Q ss_pred HHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEE
Q 003371 608 SQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMI 687 (825)
Q Consensus 608 ~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mv 687 (825)
+++++.+++|+.+|+|++++|||+. |++|+|+|+++|+||+||+++++|++||++||+|+|+
T Consensus 403 ~~~~~~~~~~~~~G~rvl~vA~~~~------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~mi 464 (755)
T TIGR01647 403 EKVEEKVDELASRGYRALGVARTDE------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMV 464 (755)
T ss_pred HHHHHHHHHHHhCCCEEEEEEEEcC------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEE
Confidence 7788899999999999999999732 3589999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcC
Q 003371 688 TGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGD 767 (825)
Q Consensus 688 TGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GD 767 (825)
||||+.||++||++|||.... .....+.+|.++..++++++.+.++++.||||++|+||+++|+.||++|++||||||
T Consensus 465 TGD~~~tA~~IA~~lGI~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD 542 (755)
T TIGR01647 465 TGDHLAIAKETARRLGLGTNI--YTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD 542 (755)
T ss_pred CCCCHHHHHHHHHHcCCCCCC--cCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 999999999999999996521 112345667777889999999999999999999999999999999999999999999
Q ss_pred CccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccCC
Q 003371 768 GTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFCW 825 (825)
Q Consensus 768 G~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~~ 825 (825)
|+||+|||++|||||||| +|||+||++|||||+||||++|+++++|||++|+||.+|
T Consensus 543 GvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~ 599 (755)
T TIGR01647 543 GVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSY 599 (755)
T ss_pred CcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 899999999999999999999999999999999999653
No 12
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=2.5e-110 Score=1022.25 Aligned_cols=643 Identities=33% Similarity=0.485 Sum_probs=546.1
Q ss_pred HHHHhhhHHHHHHHHHHHHHhhhccccCCC--CCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEe
Q 003371 160 VLEAFKDTTILILLVCAALSLGFGIKEHGA--EEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVR 237 (825)
Q Consensus 160 ~~~~~~~~~~~il~v~a~lsl~~g~~~~g~--~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R 237 (825)
++++|+++++++|++++++|+++++..++. ...|++++.|++++++..+++.+++++.++.+++|.+. .+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~-~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEY-ESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEE
Confidence 478999999999999999999998665333 24799999999999999999999999999999999865 567899999
Q ss_pred CCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCC-----------CCceeeeCceee
Q 003371 238 EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST-----------NNPFLFSGSKVA 306 (825)
Q Consensus 238 ~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~-----------~~~~l~sGt~v~ 306 (825)
||++++|++.||||||||.|++||+|||||++++|+++.||||+|||||.|+.|.+. .++++|+||.|.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998889999999999999999742 238899999999
Q ss_pred eceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccC
Q 003371 307 DGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNG 386 (825)
Q Consensus 307 ~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~ 386 (825)
+|.+.++|++||.+|+.|++.+++.....++||+|+++++++.++..+.+++++++|++++.+|.... +.
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~---------~~- 229 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPA---------LG- 229 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---------cc-
Confidence 99999999999999999999999988888899999999999999988887777776665533221100 00
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCc
Q 003371 387 SNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQ 466 (825)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~ 466 (825)
...+..+...+..++++++++||||||+++++++++++++|++++++||+++++|+||++|+||||||||||+|+
T Consensus 230 -----~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~ 304 (917)
T TIGR01116 230 -----GGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQ 304 (917)
T ss_pred -----chhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCe
Confidence 011225566777889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeccccc-------------ccccc--c------cCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhH
Q 003371 467 MKVTKFWLGQESI-------------VQETY--C------KIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTE 525 (825)
Q Consensus 467 m~v~~~~~~~~~~-------------~~~~~--~------~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e 525 (825)
|+|.+++..+... .+... . .......+.+....++|+++..... +.++..+..|+|+|
T Consensus 305 m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~-~~~~~~~~~gdp~E 383 (917)
T TIGR01116 305 MSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFN-ERKGVYEKVGEATE 383 (917)
T ss_pred EEEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeecc-ccCCceeeccChhH
Confidence 9999998765211 00000 0 0011223334455667766654321 12223345799999
Q ss_pred HHHHHHHHHHcCCchHH----------------HhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhc
Q 003371 526 KAVLSWAVLEMGMEMDK----------------VKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMC 589 (825)
Q Consensus 526 ~All~~a~~~~g~~~~~----------------~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c 589 (825)
.||++|+. +.|.+... .++.+++++.+||+|+||||+|+++.. + ++++|+|||||.|+++|
T Consensus 384 ~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~-~~~~~~KGApe~il~~c 460 (917)
T TIGR01116 384 AALKVLVE-KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-T-GNKLFVKGAPEGVLERC 460 (917)
T ss_pred HHHHHHHH-HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-C-cEEEEEcCChHHHHHhc
Confidence 99999998 78766432 345688999999999999999999753 3 38899999999999999
Q ss_pred ccccccCCeeecCChhhHHHHHHHHHHHhh-ccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcc
Q 003371 590 SHYYESNGVIKSMDGNGRSQMENIIHGMAA-SSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRP 668 (825)
Q Consensus 590 ~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~-~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~ 668 (825)
++++..+|...+++++.++++++.+++|++ +|+||+++|||+++.++...........+..|++|+|+|+++++||+||
T Consensus 461 ~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~ 540 (917)
T TIGR01116 461 THILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRP 540 (917)
T ss_pred cceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCch
Confidence 999887888999999999999999999999 9999999999998652211100001122446889999999999999999
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHH
Q 003371 669 GVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDK 748 (825)
Q Consensus 669 ~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK 748 (825)
+++++|+.||++||+++|+|||+..||.+||+++||..++.. ....+++|+++..++++++.+..++..||||++|+||
T Consensus 541 ~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~-v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K 619 (917)
T TIGR01116 541 EVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDED-VTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHK 619 (917)
T ss_pred hHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcc-ccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHH
Confidence 999999999999999999999999999999999999864321 1235799999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 749 LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 749 ~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
.++|+.||+.|++|+|+|||+||+|||++|||||||| +|+++||++||++++||||++|+++++|||++|+||.+
T Consensus 620 ~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k 694 (917)
T TIGR01116 620 SELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQ 694 (917)
T ss_pred HHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 89999999999999999999999999999999999964
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.5e-108 Score=1019.09 Aligned_cols=635 Identities=23% Similarity=0.321 Sum_probs=515.7
Q ss_pred CCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHH
Q 003371 126 EYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFL 205 (825)
Q Consensus 126 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~l 205 (825)
..||+.++ +.+|++.||.|+++.|+ ++||+++++++.+|+++++++|+++++..+ .|++++.|++++++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~--------~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLDE--------YYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhhh--------hHHHHHHHHHHHHH
Confidence 46998865 99999999999999864 799999999999999999999877776432 58898888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeC--CCCeeeceEEEEecCcceecCCCCC
Q 003371 206 VIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLK--IGDQIPADGLFLDGHSLQVDESSMT 283 (825)
Q Consensus 206 v~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~--~Gd~VPaDgili~g~~l~VDES~LT 283 (825)
..+++.+.+++..++++++.. ++..++|+|||++++|++.||||||||.|+ +||+|||||++++|+ +.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~~--~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMVH--KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhhc--CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 777766666666555555432 357899999999999999999999999999 999999999999996 699999999
Q ss_pred CCCCeeeecCC----------------CCceeeeCceeee-------ceEEEEEEEEcccchHHHHHhhccCCCCCCChh
Q 003371 284 GESDHVEVDST----------------NNPFLFSGSKVAD-------GYAQMLVVSVGMNTAWGEMMSSISSDSNERTPL 340 (825)
Q Consensus 284 GEs~pv~k~~~----------------~~~~l~sGt~v~~-------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tpl 340 (825)
|||.|+.|.+. +++++|+||.|.+ |.+.++|++||.+|..|++.+++.......+++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999752 2357999999995 889999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHH
Q 003371 341 QARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLA 420 (825)
Q Consensus 341 q~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lpla 420 (825)
++.+.++...+. ++|++.++++++.++... . .+...+..++++++++|||+||++
T Consensus 363 ~~~~~~~~~~l~----~~a~i~~i~~~~~~~~~~------~---------------~~~~~~l~~l~iiv~~vP~~LP~~ 417 (1054)
T TIGR01657 363 YKDSFKFILFLA----VLALIGFIYTIIELIKDG------R---------------PLGKIILRSLDIITIVVPPALPAE 417 (1054)
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHcC------C---------------cHHHHHHHHHHHHHhhcCchHHHH
Confidence 988877755443 333333333222222110 0 456778889999999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccc-cccccCChHHHHHHHHHH
Q 003371 421 VTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQ-ETYCKIASSIRDLFHQGV 499 (825)
Q Consensus 421 vtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~i 499 (825)
++++++++++||+|++++||++.++|++|++|+||||||||||+|+|+|.+++..+..... .............+...+
T Consensus 418 ~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (1054)
T TIGR01657 418 LSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKAL 497 (1054)
T ss_pred HHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999875432110 000000001122334455
Q ss_pred hhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCc----hHH----------HhhcceEEEEecCCCCCceeEEE
Q 003371 500 GLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGME----MDK----------VKQKYSILHVETFNSEKKRSGVL 565 (825)
Q Consensus 500 ~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~----~~~----------~~~~~~i~~~~~F~s~~krmsvv 565 (825)
++|++.... + + +..|||+|.|+++++.+....+ ... ....+++++.+||+|++|||||+
T Consensus 498 a~C~~~~~~---~--~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvv 570 (1054)
T TIGR01657 498 ATCHSLTKL---E--G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVI 570 (1054)
T ss_pred HhCCeeEEE---C--C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEE
Confidence 566654322 1 1 5789999999999764222110 000 02468899999999999999999
Q ss_pred EEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHH
Q 003371 566 IRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKA 645 (825)
Q Consensus 566 v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~ 645 (825)
++..+++++++|+|||||.|+++|++. ..++.+.+.+++|+++|+||||+|||++++.+ .......
T Consensus 571 v~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~--~~~~~~~ 636 (1054)
T TIGR01657 571 VSTNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLT--LQKAQDL 636 (1054)
T ss_pred EEEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccc--hhhhhhc
Confidence 987665568899999999999999841 23567888999999999999999999986411 1100112
Q ss_pred hhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc---------------
Q 003371 646 RQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ--------------- 710 (825)
Q Consensus 646 ~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~--------------- 710 (825)
.++..|+||+|+|+++|+||+||+++++|+.|++|||+|+|+||||+.||.+||++|||+.++..
T Consensus 637 ~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~ 716 (1054)
T TIGR01657 637 SRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPN 716 (1054)
T ss_pred cHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCc
Confidence 34567899999999999999999999999999999999999999999999999999999865421
Q ss_pred ---------------------------------cccceeeechhhhc---CCHHHHHhhccCeeEEEecCHHHHHHHHHH
Q 003371 711 ---------------------------------VEKGEVVEGVEFRN---YTDEERIQKVDKIRVMARSSPFDKLLMVQC 754 (825)
Q Consensus 711 ---------------------------------~~~~~vi~G~~~~~---~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~ 754 (825)
.....+++|++|+. +.++++.+.+++..||||++|+||.++|+.
T Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~ 796 (1054)
T TIGR01657 717 QIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVEL 796 (1054)
T ss_pred eEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHH
Confidence 01137999999876 466789999999999999999999999999
Q ss_pred HHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 755 LKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 755 Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
||+.|++|||||||+||+||||+||||||||. +|++ .+||+++++|||++|+++|+|||++|.|++
T Consensus 797 lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~--~das-~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~ 862 (1054)
T TIGR01657 797 LQKLDYTVGMCGDGANDCGALKQADVGISLSE--AEAS-VAAPFTSKLASISCVPNVIREGRCALVTSF 862 (1054)
T ss_pred HHhCCCeEEEEeCChHHHHHHHhcCcceeecc--ccce-eecccccCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999984 3554 899999999999999999999999999975
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-106 Score=898.35 Aligned_cols=675 Identities=27% Similarity=0.447 Sum_probs=569.4
Q ss_pred CHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhh-hcccc---CC
Q 003371 113 GVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLG-FGIKE---HG 188 (825)
Q Consensus 113 gv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~-~g~~~---~g 188 (825)
.+++|+++|.++..+||+..+ +.+++.+-|+|.+++|+..+=|..+.+++...+-++++++|+++++ +++.. +.
T Consensus 43 ~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~ 120 (1019)
T KOG0203|consen 43 SVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDD 120 (1019)
T ss_pred CHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCC
Confidence 799999999999999999866 9999999999999999988899999999999999999999999975 33311 11
Q ss_pred -CCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hchh--CCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeee
Q 003371 189 -AEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKL-SKIS--NNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIP 264 (825)
Q Consensus 189 -~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l-~~~~--~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VP 264 (825)
..+..|-|.. +..+++++.+..|.|+++..+. +..+ -+..++|+|||+.+.+...||||||+|.++-||+||
T Consensus 121 ~~~~nly~gii----L~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVP 196 (1019)
T KOG0203|consen 121 PSDDNLYLGIV----LAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVP 196 (1019)
T ss_pred CCCcceEEEEE----EEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCccc
Confidence 1222333322 2234455555666555554444 2222 356899999999999999999999999999999999
Q ss_pred ceEEEEecCcceecCCCCCCCCCeeeecCC--------CCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCC
Q 003371 265 ADGLFLDGHSLQVDESSMTGESDHVEVDST--------NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNE 336 (825)
Q Consensus 265 aDgili~g~~l~VDES~LTGEs~pv~k~~~--------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~ 336 (825)
||.++++++.+++|+|+|||||+|.+..+. ..++-|.+|.+.+|.++++|++||.+|.+|++..+.......
T Consensus 197 ADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~ 276 (1019)
T KOG0203|consen 197 ADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDG 276 (1019)
T ss_pred ceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCC
Confidence 999999999999999999999999988752 346789999999999999999999999999999998887889
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccc
Q 003371 337 RTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEG 416 (825)
Q Consensus 337 ~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~ 416 (825)
++|++..++++..++..+++++++++|++.++ .+. .++.++.+.+.+++..+|+|
T Consensus 277 ~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~---~gy----------------------~~l~avv~~i~iivAnvPeG 331 (1019)
T KOG0203|consen 277 KTPIAKEIEHFIHIITGVAIFLGISFFILALI---LGY----------------------EWLRAVVFLIGIIVANVPEG 331 (1019)
T ss_pred CCcchhhhhchHHHHHHHHHHHHHHHHHHHHh---hcc----------------------hhHHHhhhhheeEEecCcCC
Confidence 99999999999999988888887777765432 121 55667777889999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccc--------cccCC
Q 003371 417 LPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQET--------YCKIA 488 (825)
Q Consensus 417 Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~--------~~~~~ 488 (825)
||..+|.+|+.-.+||++++.+||++.+.|++|+.++||+|||||||+|+|+|.++|.+......+. ....+
T Consensus 332 L~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~ 411 (1019)
T KOG0203|consen 332 LLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSS 411 (1019)
T ss_pred ccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccC
Confidence 9999999999999999999999999999999999999999999999999999999999875433211 11123
Q ss_pred hHHHHHHHHHHhhcCCccccccCCCC--CcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEE
Q 003371 489 SSIRDLFHQGVGLNTTGSVSKLKPGS--SVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLI 566 (825)
Q Consensus 489 ~~~~~~l~~~i~~n~~~~~~~~~~~~--~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv 566 (825)
+. ..-+...+.+|+.+.....+.+- .+....|++.|.||++|+. ..-.+...+|+.++.+...||||.+|..-.+.
T Consensus 412 ~~-~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e-~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih 489 (1019)
T KOG0203|consen 412 AT-FIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIE-LILGSVMELRERNPKVAEIPFNSTNKYQLSIH 489 (1019)
T ss_pred ch-HHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHH-HhcchHHHHHHhhHHhhcCCcccccceEEEEE
Confidence 33 33444556677666654321111 1335689999999999997 44445578899999999999999999997777
Q ss_pred EecC--CCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccch--
Q 003371 567 RRKA--DNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNND-- 642 (825)
Q Consensus 567 ~~~~--~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~-- 642 (825)
...+ +.++.+.+|||||.++++|+.+.- +|+..|+++..++.+.....++...|-|+++|+++.+++++ ++..
T Consensus 490 ~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~--~p~~~~ 566 (1019)
T KOG0203|consen 490 ETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEK--FPRGFQ 566 (1019)
T ss_pred ecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhc--CCCceE
Confidence 6554 234778899999999999998776 89999999999999999999999999999999999998642 2211
Q ss_pred h-HHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc----------
Q 003371 643 V-KARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV---------- 711 (825)
Q Consensus 643 ~-~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~---------- 711 (825)
. ....+++.++|.|+|++.+-||+|+.+++||..||.|||+|+|+|||++.||+|||++.||+..+.+.
T Consensus 567 f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~ 646 (1019)
T KOG0203|consen 567 FDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNI 646 (1019)
T ss_pred eecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCC
Confidence 1 12345677899999999999999999999999999999999999999999999999999998755432
Q ss_pred ---------ccceeeechhhhcCCHHHHHhhccCee--EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc
Q 003371 712 ---------EKGEVVEGVEFRNYTDEERIQKVDKIR--VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780 (825)
Q Consensus 712 ---------~~~~vi~G~~~~~~~~~~~~~~~~~~~--V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV 780 (825)
....|++|.|+..++.+++++++.+.. ||||.||+||+.||+.+|++|.+|++||||+||+||||+|||
T Consensus 647 ~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADI 726 (1019)
T KOG0203|consen 647 PVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADI 726 (1019)
T ss_pred cccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhccccc
Confidence 256799999999999999999987654 999999999999999999999999999999999999999999
Q ss_pred cEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 781 GLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 781 Giamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
|||||++|++++|+|||+|||||||+|||..|++||-+|+|+.
T Consensus 727 GVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLK 769 (1019)
T KOG0203|consen 727 GVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLK 769 (1019)
T ss_pred ceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHH
Confidence 9999999999999999999999999999999999999999985
No 15
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.8e-96 Score=855.40 Aligned_cols=531 Identities=25% Similarity=0.356 Sum_probs=440.9
Q ss_pred HHHhhhHHHHHHHHHHHHHhhhccccC------CCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeE
Q 003371 161 LEAFKDTTILILLVCAALSLGFGIKEH------GAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVE 234 (825)
Q Consensus 161 ~~~~~~~~~~il~v~a~lsl~~g~~~~------g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~ 234 (825)
..+|+++++++|++++++|+++++... .+..+|..++.+++.+++..+++++.+++.+++++.|.+...+..++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 357889999999999999999885421 11234555566666666777778889999999999998876666899
Q ss_pred EEeCCE-EEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCC-CceeeeCceeeeceEEE
Q 003371 235 VVREAR-RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTN-NPFLFSGSKVADGYAQM 312 (825)
Q Consensus 235 V~R~g~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~-~~~l~sGt~v~~G~~~~ 312 (825)
|+|+|. +++|++++|+|||+|.+++||+|||||++++|.. .||||+|||||.||.|.+.. .+.+|+||.|.+|.+.+
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999987 8999999999999999999999999999999975 99999999999999998532 24599999999999999
Q ss_pred EEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCch
Q 003371 313 LVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDID 392 (825)
Q Consensus 313 ~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (825)
+|+++|.+|++|++++++++.+.++||+|..++.+...+..+.+++++.++ .+.++.+.
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~---~~~~~~g~------------------ 245 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLP---PFAAYSGG------------------ 245 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHH---HHHHHhCc------------------
Confidence 999999999999999999998889999999888876555433222211111 11122110
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEE
Q 003371 393 DVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKF 472 (825)
Q Consensus 393 ~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~ 472 (825)
. ..+..+++++|++|||+|+.+++++...+++||+++|+++|++.++|+||++|+||||||||||+|+|+++++
T Consensus 246 ----~--~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~ 319 (679)
T PRK01122 246 ----A--LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEF 319 (679)
T ss_pred ----h--HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEE
Confidence 1 1467789999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEE
Q 003371 473 WLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHV 552 (825)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~ 552 (825)
+..+.. +. .++ ...+++++.+ +.||..+||++++....+.+.. +..++..+.
T Consensus 320 ~~~~~~---------~~--~~l-l~~a~~~s~~--------------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~ 371 (679)
T PRK01122 320 LPVPGV---------TE--EEL-ADAAQLSSLA--------------DETPEGRSIVVLAKQRFNLRER--DLQSLHATF 371 (679)
T ss_pred EeCCCC---------CH--HHH-HHHHHHhcCC--------------CCCchHHHHHHHHHhhcCCCch--hhcccccee
Confidence 753221 11 122 2223333221 2368899999998732343322 223566788
Q ss_pred ecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeec
Q 003371 553 ETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQV 632 (825)
Q Consensus 553 ~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l 632 (825)
+||++.+|+|++.+ ++ +.++||++|.+++.|.. +|. +.++++++.+++++++|+|++++|+
T Consensus 372 ~pF~s~~~~~gv~~---~g---~~~~kGa~e~il~~~~~----~g~------~~~~~~~~~~~~~a~~G~~~l~va~--- 432 (679)
T PRK01122 372 VPFSAQTRMSGVDL---DG---REIRKGAVDAIRRYVES----NGG------HFPAELDAAVDEVARKGGTPLVVAE--- 432 (679)
T ss_pred EeecCcCceEEEEE---CC---EEEEECCHHHHHHHHHh----cCC------cChHHHHHHHHHHHhCCCcEEEEEE---
Confidence 99999999898854 23 46899999999999963 222 1235677888999999999999996
Q ss_pred CchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccc
Q 003371 633 SEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVE 712 (825)
Q Consensus 633 ~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~ 712 (825)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++|||.+
T Consensus 433 --------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~------ 486 (679)
T PRK01122 433 --------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------ 486 (679)
T ss_pred --------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE------
Confidence 567999999999999999999999999999999999999999999999999964
Q ss_pred cceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHH
Q 003371 713 KGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVA 792 (825)
Q Consensus 713 ~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vA 792 (825)
++||++|+||+++|+.||++|++|||||||+||||||++|||||||| +||++|
T Consensus 487 --------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvA 539 (679)
T PRK01122 487 --------------------------FLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAA 539 (679)
T ss_pred --------------------------EEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHH
Confidence 89999999999999999999999999999999999999999999999 999999
Q ss_pred HHhcCeeeccCCchHHHHHHHHhHHhh
Q 003371 793 KESSDIVILDDDFTSVATVLSPGDQLH 819 (825)
Q Consensus 793 k~aaDivlldd~f~sIv~~i~~gR~i~ 819 (825)
||+||+||+||||++|+++++|||++.
T Consensus 540 keAADiVLldd~~s~Iv~av~~GR~~~ 566 (679)
T PRK01122 540 KEAGNMVDLDSNPTKLIEVVEIGKQLL 566 (679)
T ss_pred HHhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999976
No 16
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.9e-96 Score=853.02 Aligned_cols=531 Identities=27% Similarity=0.376 Sum_probs=430.4
Q ss_pred HHhhhHHHHHHHHHHHHHhhhccccC--CCCC-cchhhhHHHHHHHHHHHHHHHH----HHHHHHHHHHHhchhCCCeeE
Q 003371 162 EAFKDTTILILLVCAALSLGFGIKEH--GAEE-GWYEGGSIFVAVFLVIVVSAFS----NFRQARQFDKLSKISNNIKVE 234 (825)
Q Consensus 162 ~~~~~~~~~il~v~a~lsl~~g~~~~--g~~~-~~~d~~~i~~~v~lv~~v~~~~----~~~~~~~~~~l~~~~~~~~v~ 234 (825)
..|++|+.++|+++++++++++...+ +... .+++++.|++.+++.+++..+. +++.+++.+.|.+...+.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 45678999999999999998886422 1111 2367778888888887777777 566666777777665544565
Q ss_pred -EEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCC-CCceeeeCceeeeceEEE
Q 003371 235 -VVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST-NNPFLFSGSKVADGYAQM 312 (825)
Q Consensus 235 -V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~-~~~~l~sGt~v~~G~~~~ 312 (825)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.||.|.+. +.+.+|+||.|.+|++.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 7799999999999999999999999999999999999976 9999999999999999853 115599999999999999
Q ss_pred EEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCch
Q 003371 313 LVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDID 392 (825)
Q Consensus 313 ~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (825)
+|+++|.+|++||+.+++++...++||+|..+..+...+ .++++++++++..+.. |.
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l-----~ii~l~~~~~~~~~~~-----------~~------- 243 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTL-----TIIFLVVILTMYPLAK-----------FL------- 243 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHh-----------hc-------
Confidence 999999999999999999988889999997776654322 2222222222111100 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEE
Q 003371 393 DVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKF 472 (825)
Q Consensus 393 ~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~ 472 (825)
.+...+..+++++|++|||+||.+++++++.+++||+|+|+++|+++++|+||++|+||||||||||+|++.++++
T Consensus 244 ----~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~ 319 (673)
T PRK14010 244 ----NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAF 319 (673)
T ss_pred ----cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEE
Confidence 1223456778888899999999999999999999999999999999999999999999999999999987777765
Q ss_pred EeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEE
Q 003371 473 WLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHV 552 (825)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~ 552 (825)
..... ....+++..+. +++. .+.||+++|+++++. +.+.+....+ .+.
T Consensus 320 ~~~~~-----------~~~~~ll~~a~-~~~~--------------~s~~P~~~AIv~~a~-~~~~~~~~~~-----~~~ 367 (673)
T PRK14010 320 IPVKS-----------SSFERLVKAAY-ESSI--------------ADDTPEGRSIVKLAY-KQHIDLPQEV-----GEY 367 (673)
T ss_pred EeCCC-----------ccHHHHHHHHH-HhcC--------------CCCChHHHHHHHHHH-HcCCCchhhh-----cce
Confidence 43211 01123333222 2221 134899999999987 6655433221 234
Q ss_pred ecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeec
Q 003371 553 ETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQV 632 (825)
Q Consensus 553 ~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l 632 (825)
+||++++|+|++.+. +. .+.|||++.++++|+. +|...+ ..+++.+++++++|+|+++++.
T Consensus 368 ~pF~~~~k~~gv~~~---g~---~i~kGa~~~il~~~~~----~g~~~~------~~~~~~~~~~a~~G~~~l~v~~--- 428 (673)
T PRK14010 368 IPFTAETRMSGVKFT---TR---EVYKGAPNSMVKRVKE----AGGHIP------VDLDALVKGVSKKGGTPLVVLE--- 428 (673)
T ss_pred eccccccceeEEEEC---CE---EEEECCHHHHHHHhhh----cCCCCc------hHHHHHHHHHHhCCCeEEEEEE---
Confidence 799999999998752 32 4569999999999984 222111 2356677889999999998763
Q ss_pred CchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccc
Q 003371 633 SEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVE 712 (825)
Q Consensus 633 ~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~ 712 (825)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||..
T Consensus 429 --------------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~------ 482 (673)
T PRK14010 429 --------------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR------ 482 (673)
T ss_pred --------------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce------
Confidence 568999999999999999999999999999999999999999999999999964
Q ss_pred cceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHH
Q 003371 713 KGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVA 792 (825)
Q Consensus 713 ~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vA 792 (825)
++||++|+||+++|+.||++|++|||||||+||||||++|||||||| +||++|
T Consensus 483 --------------------------v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvA 535 (673)
T PRK14010 483 --------------------------FVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSA 535 (673)
T ss_pred --------------------------EEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHH
Confidence 89999999999999999999999999999999999999999999999 999999
Q ss_pred HHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 793 KESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 793 k~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
||+||+||+||||++|++++++||++|+|+.+
T Consensus 536 keAADiVLldd~ls~Iv~av~~gR~i~~n~~~ 567 (673)
T PRK14010 536 KEAANLIDLDSNPTKLMEVVLIGKQLLMTRGS 567 (673)
T ss_pred HHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999854
No 17
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=9.6e-95 Score=898.58 Aligned_cols=649 Identities=26% Similarity=0.307 Sum_probs=504.5
Q ss_pred cCCCcCCCCCCccH---HHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 003371 143 FGANTYHKPPPKGL---LHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQAR 219 (825)
Q Consensus 143 ~G~N~~~~~~~~s~---~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~ 219 (825)
|.+|.+...+-..| +..+|+||+++.++++++.+++++++.+++.+ ....+++++++++++++.++.++.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~-------~~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY-------RGTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC-------ccHhHHhHHHHHHHHHHHHHHHHH
Confidence 56788876654333 57899999999999999999999998765433 223445666666677778887777
Q ss_pred HHHHHhchhCCCeeEEEeC-CEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCc----ceecCCCCCCCCCeeeecCC
Q 003371 220 QFDKLSKISNNIKVEVVRE-ARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS----LQVDESSMTGESDHVEVDST 294 (825)
Q Consensus 220 ~~~~l~~~~~~~~v~V~R~-g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~----l~VDES~LTGEs~pv~k~~~ 294 (825)
+.++.++..++..++|+|+ |++++|++.||+|||||.|++||+|||||++++++. +.||||+|||||.|+.|.+.
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 7777777778899999997 899999999999999999999999999999998654 79999999999999988631
Q ss_pred ----------------------------------------------CCceeeeCceeee-ceEEEEEEEEcccchHHHHH
Q 003371 295 ----------------------------------------------NNPFLFSGSKVAD-GYAQMLVVSVGMNTAWGEMM 327 (825)
Q Consensus 295 ----------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~g~i~ 327 (825)
.++++++||.+.+ |++.++|++||.+|.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~-- 231 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR-- 231 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh--
Confidence 1267899999998 999999999999996544
Q ss_pred hhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccC-CCCCchhhHHHHHHHHHHHH
Q 003371 328 SSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNG-SNTDIDDVFNAVVSIVAAAV 406 (825)
Q Consensus 328 ~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~av 406 (825)
+....+.++++++++++++..++..+.++++++++++.. ++..... ...|.. ...........++..|..++
T Consensus 232 -n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~--~~~~~~~----~~~~yl~~~~~~~~~~~~~~~~~~~~~ 304 (1057)
T TIGR01652 232 -NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAG--IWNDAHG----KDLWYIRLDVSERNAAANGFFSFLTFL 304 (1057)
T ss_pred -cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--heecccC----CCccceecCcccccchhHHHHHHHHHH
Confidence 555667788999999999988776666655554444321 1111100 011210 00001111223455677888
Q ss_pred HHHHHHhccchhHHHHHHHHHHH------HHHhcc----ccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecc
Q 003371 407 TIVVVAIPEGLPLAVTLTLAYSM------KRMMTD----QAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQ 476 (825)
Q Consensus 407 ~ilvvavP~~Lplavtl~la~~~------~~m~k~----~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~ 476 (825)
.+++.++|++||..++++++..+ ++|.++ +++||+++++|+||++++||+|||||||+|+|+++++++++
T Consensus 305 ~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g 384 (1057)
T TIGR01652 305 ILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAG 384 (1057)
T ss_pred HHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECC
Confidence 99999999999999999999998 788875 49999999999999999999999999999999999999887
Q ss_pred cccccccc----------c-----------c--------------------CChHHHHHHHHHHhhcCCccccccCCCCC
Q 003371 477 ESIVQETY----------C-----------K--------------------IASSIRDLFHQGVGLNTTGSVSKLKPGSS 515 (825)
Q Consensus 477 ~~~~~~~~----------~-----------~--------------------~~~~~~~~l~~~i~~n~~~~~~~~~~~~~ 515 (825)
..+..... . . ..+...+ +..++++|++.......++.+
T Consensus 385 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~l~lC~~v~~~~~~~~~~ 463 (1057)
T TIGR01652 385 VSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINE-FFLALALCHTVVPEFNDDGPE 463 (1057)
T ss_pred EEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHH-HHHHHHhcCcccccccCCCCC
Confidence 65432100 0 0 0011222 334566676655432101111
Q ss_pred -cceecCChhHHHHHHHHHHHcCCchHH--------------HhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcC
Q 003371 516 -VAEFSGSPTEKAVLSWAVLEMGMEMDK--------------VKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKG 580 (825)
Q Consensus 516 -~~~~~g~p~e~All~~a~~~~g~~~~~--------------~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KG 580 (825)
..+..|||+|.||+++|. .+|+.+.. ....|++++++||+|+||||||+++.+++ ++.+|+||
T Consensus 464 ~~~y~~~sp~E~ALl~~a~-~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~-~~~l~~KG 541 (1057)
T TIGR01652 464 EITYQAASPDEAALVKAAR-DVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG-RIKLLCKG 541 (1057)
T ss_pred ceEEEccCCcHHHHHHHHH-HCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC-eEEEEEeC
Confidence 224469999999999998 88876531 22468999999999999999999988665 48899999
Q ss_pred cHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccc---------------hhHH
Q 003371 581 AAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNN---------------DVKA 645 (825)
Q Consensus 581 a~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~---------------~~~~ 645 (825)
|||.|+++|++. +++.++.+++.+++|+.+|+||+++|||++++++..... ....
T Consensus 542 A~e~il~~~~~~----------~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~ 611 (1057)
T TIGR01652 542 ADTVIFKRLSSG----------GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDV 611 (1057)
T ss_pred cHHHHHHHhhcc----------chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 999999999741 234577889999999999999999999999875421100 0011
Q ss_pred hhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc--------------
Q 003371 646 RQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV-------------- 711 (825)
Q Consensus 646 ~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~-------------- 711 (825)
..+..|+||+|+|+++++||+||||+++|+.|++|||+|||+|||+++||.+||++|||++.+...
T Consensus 612 ~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~ 691 (1057)
T TIGR01652 612 VAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSV 691 (1057)
T ss_pred HHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHH
Confidence 124568999999999999999999999999999999999999999999999999999999764320
Q ss_pred ----------------------ccceeeechhhhcCCHHH----HHhhccCe--eEEEecCHHHHHHHHHHHHhC-CCEE
Q 003371 712 ----------------------EKGEVVEGVEFRNYTDEE----RIQKVDKI--RVMARSSPFDKLLMVQCLKKK-GHVV 762 (825)
Q Consensus 712 ----------------------~~~~vi~G~~~~~~~~~~----~~~~~~~~--~V~ar~sP~dK~~lV~~Lq~~-g~vV 762 (825)
...++++|+++..+.+++ +.+.+.+. .|+||++|+||.++|+.+|+. |++|
T Consensus 692 ~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~v 771 (1057)
T TIGR01652 692 EAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTT 771 (1057)
T ss_pred HHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeE
Confidence 123689999998665543 44555554 499999999999999999998 9999
Q ss_pred EEEcCCccCHHHhhhCCccEecCCCchH--HHHHhcCeeeccCCchHHHHHH-HHhHHhhccccC
Q 003371 763 AVTGDGTNDAPALKEADVGLSMGIQGTE--VAKESSDIVILDDDFTSVATVL-SPGDQLHSGCFC 824 (825)
Q Consensus 763 a~~GDG~NDapALk~AdVGiamg~~gt~--vAk~aaDivlldd~f~sIv~~i-~~gR~i~~ni~~ 824 (825)
+|||||+||+|||++|||||+ +.|+| .|+++||++|. +|+.|.+++ .+||++|+|+..
T Consensus 772 l~iGDG~ND~~mlk~AdVGIg--i~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~ 832 (1057)
T TIGR01652 772 LAIGDGANDVSMIQEADVGVG--ISGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISK 832 (1057)
T ss_pred EEEeCCCccHHHHhhcCeeeE--ecChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHH
Confidence 999999999999999999995 46777 69999999998 499999998 779999999843
No 18
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=6.2e-92 Score=815.50 Aligned_cols=534 Identities=26% Similarity=0.372 Sum_probs=439.3
Q ss_pred HHHhhhHHHHHHHHHHHHHhhhcccc--C---CCCCcchhh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCe
Q 003371 161 LEAFKDTTILILLVCAALSLGFGIKE--H---GAEEGWYEG---GSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIK 232 (825)
Q Consensus 161 ~~~~~~~~~~il~v~a~lsl~~g~~~--~---g~~~~~~d~---~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~ 232 (825)
..+|+|+++++|++++++|+++++.+ . +...+||++ +.+++.+++..+++++.+++.++++++|.+...+..
T Consensus 27 ~~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~ 106 (675)
T TIGR01497 27 KAQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTF 106 (675)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 34789999999999999999987632 1 222358875 445566777778888999999999999988766667
Q ss_pred eEEEe-CCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCC-ceeeeCceeeeceE
Q 003371 233 VEVVR-EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNN-PFLFSGSKVADGYA 310 (825)
Q Consensus 233 v~V~R-~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~-~~l~sGt~v~~G~~ 310 (825)
++|+| ||++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.||.|.+... +.+|+||.|.+|++
T Consensus 107 a~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~ 185 (675)
T TIGR01497 107 AKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWL 185 (675)
T ss_pred EEEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEE
Confidence 88886 899999999999999999999999999999999996 5999999999999999985432 24999999999999
Q ss_pred EEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCC
Q 003371 311 QMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTD 390 (825)
Q Consensus 311 ~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (825)
.++|+++|.+|++|++++++++.+.++||+|..++.+...+..+.++ ++++++....+.+
T Consensus 186 ~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li---~~~~~~~~~~~~~----------------- 245 (675)
T TIGR01497 186 VVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL---VTATLWPFAAYGG----------------- 245 (675)
T ss_pred EEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhcC-----------------
Confidence 99999999999999999999988888999998888776544322221 1122221111100
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEE
Q 003371 391 IDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVT 470 (825)
Q Consensus 391 ~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~ 470 (825)
. ...+..+++++|++|||+|+...+.....+++||+++|+++|++.+||+||++|+||||||||||+|+|+++
T Consensus 246 ------~-~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~ 318 (675)
T TIGR01497 246 ------N-AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLAS 318 (675)
T ss_pred ------h-hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEE
Confidence 0 113566788999999998887777777789999999999999999999999999999999999999999999
Q ss_pred EEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEE
Q 003371 471 KFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSIL 550 (825)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~ 550 (825)
+++..+.. + ..+++ ..+++++. .+.||.++|+++++. +.|.+.... .++..
T Consensus 319 ~~~~~~~~---------~--~~~ll-~~aa~~~~--------------~s~hP~a~Aiv~~a~-~~~~~~~~~--~~~~~ 369 (675)
T TIGR01497 319 EFIPAQGV---------D--EKTLA-DAAQLASL--------------ADDTPEGKSIVILAK-QLGIREDDV--QSLHA 369 (675)
T ss_pred EEEecCCC---------c--HHHHH-HHHHHhcC--------------CCCCcHHHHHHHHHH-HcCCCcccc--ccccc
Confidence 98753211 1 11222 22323321 135799999999997 666544321 23456
Q ss_pred EEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEe
Q 003371 551 HVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYK 630 (825)
Q Consensus 551 ~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k 630 (825)
+..||++.+|+|++.+. ++ +.++||++|.+++.|.. +|.. .+..+++.+++++++|+|++++|+
T Consensus 370 ~~~pf~~~~~~sg~~~~--~g---~~~~kGa~e~i~~~~~~----~g~~------~~~~~~~~~~~~a~~G~r~l~va~- 433 (675)
T TIGR01497 370 TFVEFTAQTRMSGINLD--NG---RMIRKGAVDAIKRHVEA----NGGH------IPTDLDQAVDQVARQGGTPLVVCE- 433 (675)
T ss_pred eEEEEcCCCcEEEEEEe--CC---eEEEECCHHHHHHHHHh----cCCC------CcHHHHHHHHHHHhCCCeEEEEEE-
Confidence 78999999888877543 23 46899999999998852 2221 224577788999999999999997
Q ss_pred ecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc
Q 003371 631 QVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ 710 (825)
Q Consensus 631 ~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~ 710 (825)
+.+++|+++++||+|||++++|++||++||+++|+||||..||.++|+++||..
T Consensus 434 ----------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---- 487 (675)
T TIGR01497 434 ----------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---- 487 (675)
T ss_pred ----------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----
Confidence 347999999999999999999999999999999999999999999999999964
Q ss_pred cccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchH
Q 003371 711 VEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTE 790 (825)
Q Consensus 711 ~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~ 790 (825)
++||++|+||..+|+.+|++|+.|+|+|||+||+|||++|||||||| +|++
T Consensus 488 ----------------------------v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~ 538 (675)
T TIGR01497 488 ----------------------------FIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQ 538 (675)
T ss_pred ----------------------------EEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCH
Confidence 89999999999999999999999999999999999999999999999 8999
Q ss_pred HHHHhcCeeeccCCchHHHHHHHHhHHhhccc
Q 003371 791 VAKESSDIVILDDDFTSVATVLSPGDQLHSGC 822 (825)
Q Consensus 791 vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni 822 (825)
+||++||+|++||||++|+++++|||+++-+.
T Consensus 539 ~akeaadivLldd~~s~Iv~av~~GR~~~~t~ 570 (675)
T TIGR01497 539 AAKEAANMVDLDSDPTKLIEVVHIGKQLLITR 570 (675)
T ss_pred HHHHhCCEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998653
No 19
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2.6e-88 Score=832.60 Aligned_cols=653 Identities=21% Similarity=0.285 Sum_probs=502.3
Q ss_pred hcCCCcCCCCCCccHHH----HHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHH
Q 003371 142 LFGANTYHKPPPKGLLH----FVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQ 217 (825)
Q Consensus 142 ~~G~N~~~~~~~~s~~~----~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~ 217 (825)
.|..|.+...+ .++|. .+|+||+.+.++++++.++++++..++..+ ..+.+++++++++++++.++.+
T Consensus 86 ~f~~N~i~TsK-Yt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~-------~~t~~~PL~~vl~v~~ike~~E 157 (1178)
T PLN03190 86 EFAGNSIRTAK-YSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFG-------RGASILPLAFVLLVTAVKDAYE 157 (1178)
T ss_pred cCCCCeeeccc-cccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCC-------cchHHHHHHHHHHHHHHHHHHH
Confidence 58889988664 34444 488999999999999999999988765432 2345677888888888888888
Q ss_pred HHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCc----ceecCCCCCCCCCeeeecC
Q 003371 218 ARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS----LQVDESSMTGESDHVEVDS 293 (825)
Q Consensus 218 ~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~----l~VDES~LTGEs~pv~k~~ 293 (825)
+.+.++.++..|+..++|+|+|.+++++|.||+|||+|.|++||+|||||++++++. +.||||+|||||.|+.|.+
T Consensus 158 d~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 158 DWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred HHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 888888887788899999999999999999999999999999999999999998433 5999999999999998863
Q ss_pred C-------------------------------------------CCceeeeCceeee-ceEEEEEEEEcccchHHHHHhh
Q 003371 294 T-------------------------------------------NNPFLFSGSKVAD-GYAQMLVVSVGMNTAWGEMMSS 329 (825)
Q Consensus 294 ~-------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~g~i~~~ 329 (825)
. .+++++.||.+.. .++.++|++||.+| |++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N 314 (1178)
T PLN03190 238 KQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLN 314 (1178)
T ss_pred cchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhc
Confidence 1 1245666666665 37999999999999 56767
Q ss_pred ccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCC---------CCchhhHHHHHH
Q 003371 330 ISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSN---------TDIDDVFNAVVS 400 (825)
Q Consensus 330 ~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 400 (825)
......+.+++++++|++..++..+.+++++++.++.. ++.....+......|.... ..........+.
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~--~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAA--VWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFF 392 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHH--hhhccccccccccccccccccccccccccccchhhHHHHH
Confidence 66677889999999999987776666555554444321 1111111111111121100 000000001122
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccc----------cccccchhhhcccCeEEEEecCcCccccCceEEE
Q 003371 401 IVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQ----------AMVRKLPACETMGSATVICTDKTGTLTLNQMKVT 470 (825)
Q Consensus 401 ~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~----------~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~ 470 (825)
.|..++.++...||++|+..++++....+..|.+|. +.||+.+..|+||++++||+|||||||+|+|+++
T Consensus 393 ~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk 472 (1178)
T PLN03190 393 TFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQ 472 (1178)
T ss_pred HHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEE
Confidence 334445566689999999999999988788888776 6799999999999999999999999999999999
Q ss_pred EEEeccccccccc---------------------ccc--C------------C-h--HHHHHHHHHHhhcCCccccccCC
Q 003371 471 KFWLGQESIVQET---------------------YCK--I------------A-S--SIRDLFHQGVGLNTTGSVSKLKP 512 (825)
Q Consensus 471 ~~~~~~~~~~~~~---------------------~~~--~------------~-~--~~~~~l~~~i~~n~~~~~~~~~~ 512 (825)
++++++..|..+. ... . . + ....-+..++++|++.......+
T Consensus 473 ~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~ 552 (1178)
T PLN03190 473 CASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDD 552 (1178)
T ss_pred EEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCC
Confidence 9999765543110 000 0 0 0 01122344667777765431101
Q ss_pred C-C---Ccc-eecCChhHHHHHHHHHHHcCC------------chHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEE
Q 003371 513 G-S---SVA-EFSGSPTEKAVLSWAVLEMGM------------EMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTH 575 (825)
Q Consensus 513 ~-~---~~~-~~~g~p~e~All~~a~~~~g~------------~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~ 575 (825)
. + ... +..+||+|.||+.+|. ++|+ +....+..|++++++||+|+||||||+++.+++. +.
T Consensus 553 ~~~~~~~~~~Y~a~SPdE~ALv~~a~-~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~-~~ 630 (1178)
T PLN03190 553 TSDPTVKLMDYQGESPDEQALVYAAA-AYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKT-VK 630 (1178)
T ss_pred CCCccccceEEecCCCcHHHHHHHHH-HCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCc-EE
Confidence 1 1 112 3445999999999998 8887 4445677899999999999999999999876554 88
Q ss_pred EEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccc-h------------
Q 003371 576 IHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNN-D------------ 642 (825)
Q Consensus 576 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~-~------------ 642 (825)
+|+|||+|.|+++|++..+ ++.++.+++.+++||++|+|||++|||++++++..... .
T Consensus 631 l~~KGA~e~il~~~~~~~~---------~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~ 701 (1178)
T PLN03190 631 VFVKGADTSMFSVIDRSLN---------MNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRA 701 (1178)
T ss_pred EEEecCcHHHHHhhccccc---------chhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhH
Confidence 9999999999999985432 34567788999999999999999999999764322100 0
Q ss_pred --hHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc---------
Q 003371 643 --VKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV--------- 711 (825)
Q Consensus 643 --~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~--------- 711 (825)
.....+..|+||+++|+++++||+|++++++|+.|++|||+|||+|||+..||.+||++|||++++...
T Consensus 702 ~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~ 781 (1178)
T PLN03190 702 ALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKE 781 (1178)
T ss_pred HHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchh
Confidence 011124568999999999999999999999999999999999999999999999999999998764210
Q ss_pred -----------------------------------ccceeeechhhhcCCH----HHHHhhccCee--EEEecCHHHHHH
Q 003371 712 -----------------------------------EKGEVVEGVEFRNYTD----EERIQKVDKIR--VMARSSPFDKLL 750 (825)
Q Consensus 712 -----------------------------------~~~~vi~G~~~~~~~~----~~~~~~~~~~~--V~ar~sP~dK~~ 750 (825)
...++++|..+..+.+ +++.+...++. |+||++|.||++
T Consensus 782 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~ 861 (1178)
T PLN03190 782 SCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAG 861 (1178)
T ss_pred hHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHH
Confidence 1237899999998875 45666665554 799999999999
Q ss_pred HHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEecCCCchH--HHHHhcCeeeccCCchHHHHHH-HHhHHhhccc
Q 003371 751 MVQCLKKK-GHVVAVTGDGTNDAPALKEADVGLSMGIQGTE--VAKESSDIVILDDDFTSVATVL-SPGDQLHSGC 822 (825)
Q Consensus 751 lV~~Lq~~-g~vVa~~GDG~NDapALk~AdVGiamg~~gt~--vAk~aaDivlldd~f~sIv~~i-~~gR~i~~ni 822 (825)
+|+.+|+. +++|+|+|||+||+|||++||||| |++|+| .|+.+||+.|. .|..+.+++ -+||+.|.|+
T Consensus 862 IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~--~Fr~L~rLLlvHGr~~y~R~ 933 (1178)
T PLN03190 862 IVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMG--QFRFLVPLLLVHGHWNYQRM 933 (1178)
T ss_pred HHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchh--hhHHHHHHHHHhCHHHHHHH
Confidence 99999997 689999999999999999999999 778999 89999999999 899999997 5899999986
No 20
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-87 Score=756.59 Aligned_cols=633 Identities=22% Similarity=0.328 Sum_probs=493.7
Q ss_pred CCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHH
Q 003371 126 EYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFL 205 (825)
Q Consensus 126 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~l 205 (825)
..||+..+ +.+|+..||+|.+..+ .++.+.++.+..-+|+.++..++.++++.-. ++|.+..|++.-+.
T Consensus 158 ~~gL~~~~--~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlFQ~fSv~lW~~d~--------Y~~YA~cI~iisv~ 226 (1140)
T KOG0208|consen 158 SNGLERQE--IIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLFQAFSVALWLADS--------YYYYAFCIVIISVY 226 (1140)
T ss_pred cCCccHHH--HHhHHhhcCCceeeee-cccHHHHHHHhccchHHHHHhHHhhhhhccc--------chhhhhHHHHHHHH
Confidence 56887754 9999999999999876 5799999999999999999988877776543 34455566555555
Q ss_pred HHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCC-CCeeeceEEEEecCcceecCCCCCC
Q 003371 206 VIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKI-GDQIPADGLFLDGHSLQVDESSMTG 284 (825)
Q Consensus 206 v~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~-Gd~VPaDgili~g~~l~VDES~LTG 284 (825)
.++++.+....|++..+++-+ ....|+|+|+|.+++|.+.|||||||+.+.+ |-..|||+++++|++ .||||+|||
T Consensus 227 Si~~sv~e~r~qs~rlr~mv~--~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNEsmLTG 303 (1140)
T KOG0208|consen 227 SIVLSVYETRKQSIRLRSMVK--FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-EeecccccC
Confidence 555555555555555555543 2468999999999999999999999999988 999999999999987 899999999
Q ss_pred CCCeeeecCC-----------------CCceeeeCceeee------ceEEEEEEEEcccchHHHHHhhccCCCCCCChhH
Q 003371 285 ESDHVEVDST-----------------NNPFLFSGSKVAD------GYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQ 341 (825)
Q Consensus 285 Es~pv~k~~~-----------------~~~~l~sGt~v~~------G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq 341 (825)
||.||.|.+. ..+++|+||++++ |.+.+.|++||.+|..|++.+++..++.. +++
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~--~fk 381 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPV--NFK 381 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCc--ccH
Confidence 9999999863 3468999999986 67899999999999999999999876543 333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHH
Q 003371 342 ARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAV 421 (825)
Q Consensus 342 ~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplav 421 (825)
-..|.+ .+.....++|++.|+...+.+.... . .+-.+++.++-++.+.+|++||.++
T Consensus 382 fyrds~--~fi~~l~~ia~~gfiy~~i~l~~~g------~---------------~~~~iiirsLDliTi~VPPALPAal 438 (1140)
T KOG0208|consen 382 FYRDSF--KFILFLVIIALIGFIYTAIVLNLLG------V---------------PLKTIIIRSLDLITIVVPPALPAAL 438 (1140)
T ss_pred HHHHHH--HHHHHHHHHHHHHHHHHhHhHHHcC------C---------------CHHHHhhhhhcEEEEecCCCchhhh
Confidence 333322 2333333444444544433332211 0 4556788899999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccccc--------cc----ccC--
Q 003371 422 TLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQE--------TY----CKI-- 487 (825)
Q Consensus 422 tl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~--------~~----~~~-- 487 (825)
++...++.+||.|+|++|-++..+...|+++++|||||||||++.+.+-.+..-....+.. .. ..+
T Consensus 439 tvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 518 (1140)
T KOG0208|consen 439 TVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSL 518 (1140)
T ss_pred hHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccc
Confidence 9999999999999999999999999999999999999999999999998877532211100 00 000
Q ss_pred Ch--HHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHc------CCc-------------h-----H
Q 003371 488 AS--SIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEM------GME-------------M-----D 541 (825)
Q Consensus 488 ~~--~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~------g~~-------------~-----~ 541 (825)
.. .....+..+++.|+ ++... ..+..|+|.|.-+.+...+.+ +.. + +
T Consensus 519 ~~~~~~~~~~~~a~atCH--SL~~v-----~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~ 591 (1140)
T KOG0208|consen 519 RSSSLPMGNLVAAMATCH--SLTLV-----DGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFN 591 (1140)
T ss_pred cccCCchHHHHHHHhhhc--eeEEe-----CCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCccccc
Confidence 00 01223444555555 33221 124577787776665432211 000 0 0
Q ss_pred HHh----hcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHH
Q 003371 542 KVK----QKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGM 617 (825)
Q Consensus 542 ~~~----~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~ 617 (825)
... +.+.+++.+||+|..+||||++..++.++..+|+|||||.|.+.|.+ +..+..+++.++.|
T Consensus 592 ~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------------~tvP~dy~evl~~Y 659 (1140)
T KOG0208|consen 592 QSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------------ETVPADYQEVLKEY 659 (1140)
T ss_pred CCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------------ccCCccHHHHHHHH
Confidence 000 14789999999999999999999987788999999999999999984 23456789999999
Q ss_pred hhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHH
Q 003371 618 AASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA 697 (825)
Q Consensus 618 a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~a 697 (825)
+.+|+|+||+|+|+++.. .........++..|.||+|+|++.+++++|++++.+|+.|++|.|+++|+||||..||..
T Consensus 660 t~~GfRVIAlA~K~L~~~--~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTais 737 (1140)
T KOG0208|consen 660 THQGFRVIALASKELETS--TLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAIS 737 (1140)
T ss_pred HhCCeEEEEEecCccCcc--hHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeee
Confidence 999999999999999762 111122245778899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccccccc--------------------------------------------------ccceeeechhhhcCC-
Q 003371 698 IATECGILRLDQQV--------------------------------------------------EKGEVVEGVEFRNYT- 726 (825)
Q Consensus 698 IA~~~GI~~~~~~~--------------------------------------------------~~~~vi~G~~~~~~~- 726 (825)
+||+||++.+.... ....+++|+.|+-+.
T Consensus 738 VakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~ 817 (1140)
T KOG0208|consen 738 VAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILE 817 (1140)
T ss_pred hhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHh
Confidence 99999999754320 245789999988664
Q ss_pred --HHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCC
Q 003371 727 --DEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD 804 (825)
Q Consensus 727 --~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~ 804 (825)
.+.+..++.+..|||||+|.||.++|+.||+.|+.|+|+|||.||+.|||+||||||++.+... -||.+.---.+
T Consensus 818 ~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSeaEAS---vAApFTSk~~~ 894 (1140)
T KOG0208|consen 818 HFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEAEAS---VAAPFTSKTPS 894 (1140)
T ss_pred hcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhhhHh---hcCccccCCCc
Confidence 4667778889999999999999999999999999999999999999999999999999855444 45888877789
Q ss_pred chHHHHHHHHhHHhhcc
Q 003371 805 FTSVATVLSPGDQLHSG 821 (825)
Q Consensus 805 f~sIv~~i~~gR~i~~n 821 (825)
.+.++++|++||+....
T Consensus 895 I~cVp~vIrEGRaALVT 911 (1140)
T KOG0208|consen 895 ISCVPDVIREGRAALVT 911 (1140)
T ss_pred hhhHhHHHhhhhhhhhh
Confidence 99999999999997654
No 21
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-86 Score=716.51 Aligned_cols=624 Identities=25% Similarity=0.375 Sum_probs=499.7
Q ss_pred hCCHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCC
Q 003371 111 LGGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAE 190 (825)
Q Consensus 111 ~ggv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~ 190 (825)
-|-++.+-..|.+..+ ||+++| +.+|++.||.|++.+++...|++| +.-|-+|.-++.-.+|++..++. ...|.+
T Consensus 20 ~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKF-l~Fm~~PlswVMEaAAimA~~La-ng~~~~ 94 (942)
T KOG0205|consen 20 AIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKF-LGFMWNPLSWVMEAAAIMAIGLA-NGGGRP 94 (942)
T ss_pred cCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHH-HHHHhchHHHHHHHHHHHHHHHh-cCCCCC
Confidence 3467888887777644 999977 999999999999998876655554 33334456677777777765553 224556
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEE
Q 003371 191 EGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFL 270 (825)
Q Consensus 191 ~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili 270 (825)
..|.|.+.|...+++...++.+.+|+.......|.+- -..+.+|+|||+|.++...+||||||+.++.||+|||||+++
T Consensus 95 ~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~-LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl 173 (942)
T KOG0205|consen 95 PDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAG-LAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLL 173 (942)
T ss_pred cchhhhhhhheeeeecceeeeeeccccchHHHHHHhc-cCcccEEeecCeeeeeeccccccCceeeeccCCEecCcccee
Confidence 6899999998888888888889999888887777543 246788999999999999999999999999999999999999
Q ss_pred ecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHH
Q 003371 271 DGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTST 350 (825)
Q Consensus 271 ~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 350 (825)
+|+-|+||+|+|||||.||.|. +++.+||||.|.+|.+.|+|++||.+|..||...++.. .+..-.+|+-|+.+.++
T Consensus 174 ~gD~LkiDQSAlTGESLpvtKh--~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 174 EGDPLKIDQSALTGESLPVTKH--PGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred cCCccccchhhhcCCccccccC--CCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 9999999999999999999998 68889999999999999999999999999999999876 66678889988887765
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHH-HhccchhHHHHHHHHHHH
Q 003371 351 IGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVV-AIPEGLPLAVTLTLAYSM 429 (825)
Q Consensus 351 i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvv-avP~~Lplavtl~la~~~ 429 (825)
.... +++-+++.+.+.|...+ ...+....-+.++++ .+|.|||..++.++|.+.
T Consensus 251 ci~s---i~~g~lie~~vmy~~q~----------------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs 305 (942)
T KOG0205|consen 251 CICS---IALGMLIEITVMYPIQH----------------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (942)
T ss_pred HHHH---HHHHHHHHHHhhhhhhh----------------------hhhhhhhhheheeeecccccccceeeeehhhHHH
Confidence 5322 12222222233333321 111222223334444 499999999999999999
Q ss_pred HHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEE--E--EeccccccccccccCChHHHHHHHHHHhhcCCc
Q 003371 430 KRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTK--F--WLGQESIVQETYCKIASSIRDLFHQGVGLNTTG 505 (825)
Q Consensus 430 ~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~--~--~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~ 505 (825)
.+|.++|+++++++|+|.|+.++++|+|||||||.|+++|.+ + +..+ ++++..-++ .+..+
T Consensus 306 ~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g----------v~~D~~~L~---A~rAs-- 370 (942)
T KOG0205|consen 306 HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG----------VDKDDVLLT---AARAS-- 370 (942)
T ss_pred HHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC----------CChHHHHHH---HHHHh--
Confidence 999999999999999999999999999999999999999987 3 3222 122222111 11111
Q ss_pred cccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHH
Q 003371 506 SVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEII 585 (825)
Q Consensus 506 ~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~i 585 (825)
..+ --+..+.|++.... |+.+.+..++.++..|||+..||-+..+..++|+ .+..+|||||.|
T Consensus 371 r~e-----------n~DAID~A~v~~L~-----dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~-~~r~sKGAPeqi 433 (942)
T KOG0205|consen 371 RKE-----------NQDAIDAAIVGMLA-----DPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGN-WHRVSKGAPEQI 433 (942)
T ss_pred hhc-----------ChhhHHHHHHHhhc-----CHHHHhhCceEEeeccCCccccceEEEEECCCCC-EEEecCCChHHH
Confidence 111 12578889887443 3678889999999999999999999999888887 677899999999
Q ss_pred HHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCC
Q 003371 586 LAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDP 665 (825)
Q Consensus 586 l~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~Dp 665 (825)
++.|.. +.+.++.+.+.+++||++|+|.+++|++..++.. .+.......|+|+.-+-||
T Consensus 434 l~l~~~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~----------~~~~g~pw~~~gllp~fdp 492 (942)
T KOG0205|consen 434 LKLCNE-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKT----------KESPGGPWEFVGLLPLFDP 492 (942)
T ss_pred HHHhhc-----------cCcchHHHHHHHHHHHHhcchhhhhhhhcccccc----------ccCCCCCcccccccccCCC
Confidence 999973 3467888999999999999999999999886622 2234456789999999999
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhh-hcCCHHHHHhhccCeeEEEecC
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEF-RNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~-~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+|.+..++|+.....|++|.|+|||....++..++++|.-+.-.. +..+-|..- .++...+..+.+.+..=||.+.
T Consensus 493 prhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp---ss~llG~~~~~~~~~~~v~elie~adgfAgVf 569 (942)
T KOG0205|consen 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP---SSALLGLGKDGSMPGSPVDELIEKADGFAGVF 569 (942)
T ss_pred CccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC---chhhccCCCCCCCCCCcHHHHhhhccCccccC
Confidence 999999999999999999999999999999999999998653211 111111111 1122223444555556799999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccccC
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCFC 824 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~~ 824 (825)
|+||+.+|+.||++||.|+|||||+||+||||+||+|||+. .+|+.|+.+|||||+...++.|+.++..+|.+|+++.+
T Consensus 570 pehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmkn 648 (942)
T KOG0205|consen 570 PEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648 (942)
T ss_pred HHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999998 89999999999999999999999999999999999987
Q ss_pred C
Q 003371 825 W 825 (825)
Q Consensus 825 ~ 825 (825)
|
T Consensus 649 y 649 (942)
T KOG0205|consen 649 Y 649 (942)
T ss_pred h
Confidence 6
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-80 Score=717.49 Aligned_cols=526 Identities=27% Similarity=0.389 Sum_probs=417.0
Q ss_pred CccHHHHHHHHhhhHH-HH--HHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhchh
Q 003371 153 PKGLLHFVLEAFKDTT-IL--ILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLV-IVVSAFSNFRQARQFDKLSKIS 228 (825)
Q Consensus 153 ~~s~~~~~~~~~~~~~-~~--il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv-~~v~~~~~~~~~~~~~~l~~~~ 228 (825)
..+|++-.|+.++... .+ +..++++.+++++....-.. .||+..++++.++++ -.++....-+..+..++|.++
T Consensus 131 g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~-~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l- 208 (713)
T COG2217 131 GWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLYATLFP-VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDL- 208 (713)
T ss_pred hHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 4566667777777642 22 22223333344443211011 456655544443332 233333333444445555544
Q ss_pred CCCeeEEEe-CCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeee
Q 003371 229 NNIKVEVVR-EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVAD 307 (825)
Q Consensus 229 ~~~~v~V~R-~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~ 307 (825)
.+..+++++ ||+.++|++++|+|||+|.++|||+||+||++++|++ .||||+|||||.||.|. .++.+++||.+.+
T Consensus 209 ~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~--~Gd~V~aGtiN~~ 285 (713)
T COG2217 209 APKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKK--PGDEVFAGTVNLD 285 (713)
T ss_pred CCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecC--CCCEEeeeEEECC
Confidence 355676666 5669999999999999999999999999999999999 99999999999999998 6889999999999
Q ss_pred ceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCC
Q 003371 308 GYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGS 387 (825)
Q Consensus 308 G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~ 387 (825)
|..++.|+++|.+|.+++|++++++++..++|.|+..|+++.++.++++++++++|++|. +.+. .
T Consensus 286 G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~---~~~~-------~----- 350 (713)
T COG2217 286 GSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWP---LFGG-------G----- 350 (713)
T ss_pred ccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHH---HhcC-------C-----
Confidence 999999999999999999999999999999999999999999999999999999998653 2221 0
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCce
Q 003371 388 NTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQM 467 (825)
Q Consensus 388 ~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m 467 (825)
.+...|..++++++++|||+|.+++|+++..++.+.++.|+|+|+..++|+++++++|+||||||||+|+|
T Consensus 351 ---------~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p 421 (713)
T COG2217 351 ---------DWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKP 421 (713)
T ss_pred ---------cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCce
Confidence 34457889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCC-chHHHhhc
Q 003371 468 KVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGM-EMDKVKQK 546 (825)
Q Consensus 468 ~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~-~~~~~~~~ 546 (825)
+|+++...+. + ..++|....++ +..+.||..+||.+++. +.+. +.+
T Consensus 422 ~v~~v~~~~~--~----------e~~~L~laAal---------------E~~S~HPiA~AIv~~a~-~~~~~~~~----- 468 (713)
T COG2217 422 EVTDVVALDG--D----------EDELLALAAAL---------------EQHSEHPLAKAIVKAAA-ERGLPDVE----- 468 (713)
T ss_pred EEEEEecCCC--C----------HHHHHHHHHHH---------------HhcCCChHHHHHHHHHH-hcCCCCcc-----
Confidence 9999876543 1 11222222211 12477999999999887 4441 111
Q ss_pred ceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEE
Q 003371 547 YSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIA 626 (825)
Q Consensus 547 ~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~ 626 (825)
.|.... ..|+.... +|..++ -|++..+.+.-. ..+ . ....++.+..+|..++.
T Consensus 469 -------~~~~i~-G~Gv~~~v-~g~~v~---vG~~~~~~~~~~----------~~~----~-~~~~~~~~~~~G~t~v~ 521 (713)
T COG2217 469 -------DFEEIP-GRGVEAEV-DGERVL---VGNARLLGEEGI----------DLP----L-LSERIEALESEGKTVVF 521 (713)
T ss_pred -------ceeeec-cCcEEEEE-CCEEEE---EcCHHHHhhcCC----------Ccc----c-hhhhHHHHHhcCCeEEE
Confidence 121111 33443322 444344 498888754211 011 0 44567778889988888
Q ss_pred EEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc
Q 003371 627 FAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (825)
Q Consensus 627 lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~ 706 (825)
++. |-.++|++.+.|++||+++++|++||+.|+++.|+||||..+|++||+++||.+
T Consensus 522 va~-----------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~ 578 (713)
T COG2217 522 VAV-----------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE 578 (713)
T ss_pred EEE-----------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh
Confidence 876 337999999999999999999999999999999999999999999999999964
Q ss_pred cccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC
Q 003371 707 LDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI 786 (825)
Q Consensus 707 ~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~ 786 (825)
|+|.+.|+||.++|+.||++|++|+|+|||+||||||++||||||||
T Consensus 579 --------------------------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG- 625 (713)
T COG2217 579 --------------------------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMG- 625 (713)
T ss_pred --------------------------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeec-
Confidence 89999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 787 QGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 787 ~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
+|||+|+|+||++|++|++..++++++.+|+.+.||.
T Consensus 626 ~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~Ik 662 (713)
T COG2217 626 SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIK 662 (713)
T ss_pred CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999999999888774
No 23
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=2.5e-77 Score=714.88 Aligned_cols=515 Identities=23% Similarity=0.322 Sum_probs=422.2
Q ss_pred ccHHHHHHHHhhhHH--HH--HHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhC
Q 003371 154 KGLLHFVLEAFKDTT--IL--ILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISN 229 (825)
Q Consensus 154 ~s~~~~~~~~~~~~~--~~--il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~ 229 (825)
.+|++-.|+.++... .+ +..++++.++++| .|.+++.+++.+++--.++.+.+++.++..++|.+. .
T Consensus 171 ~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~--------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l-~ 241 (741)
T PRK11033 171 YPIARKALRLIRSGSPFAIETLMSVAAIGALFIG--------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMAL-V 241 (741)
T ss_pred HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 456666677665422 22 2334455555554 366666666555555666666666667777777654 4
Q ss_pred CCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeece
Q 003371 230 NIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGY 309 (825)
Q Consensus 230 ~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~ 309 (825)
+..++|+|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|. .++.+|+||.+.+|.
T Consensus 242 p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~-~vdes~lTGEs~Pv~k~--~Gd~V~aGt~~~~G~ 318 (741)
T PRK11033 242 PETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA-SFDESALTGESIPVERA--TGEKVPAGATSVDRL 318 (741)
T ss_pred CCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcE-EeecccccCCCCCEecC--CCCeeccCCEEcCce
Confidence 678999999999999999999999999999999999999999986 89999999999999998 578999999999999
Q ss_pred EEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCC
Q 003371 310 AQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNT 389 (825)
Q Consensus 310 ~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 389 (825)
+++.|+++|.+|.+|+|.+++++.+.+++|+|+.+++++.++.++++++++++|++|.. +.+.
T Consensus 319 ~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~--~~~~--------------- 381 (741)
T PRK11033 319 VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPL--LFAA--------------- 381 (741)
T ss_pred EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HccC---------------
Confidence 99999999999999999999999899999999999999999999999999999887632 1110
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEE
Q 003371 390 DIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKV 469 (825)
Q Consensus 390 ~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v 469 (825)
.+...+..++++++++|||+|.+++|+++..++.+++|+|+++|+++++|+|+++++||||||||||+|+|+|
T Consensus 382 -------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v 454 (741)
T PRK11033 382 -------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQV 454 (741)
T ss_pred -------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEE
Confidence 2334567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceE
Q 003371 470 TKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSI 549 (825)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i 549 (825)
++++..+.. +++ +++..+.+. + ..+.||.++|+++++. +.+.+
T Consensus 455 ~~~~~~~~~---------~~~--~~l~~aa~~------e---------~~s~hPia~Ai~~~a~-~~~~~---------- 497 (741)
T PRK11033 455 TDIHPATGI---------SES--ELLALAAAV------E---------QGSTHPLAQAIVREAQ-VRGLA---------- 497 (741)
T ss_pred EEEEecCCC---------CHH--HHHHHHHHH------h---------cCCCCHHHHHHHHHHH-hcCCC----------
Confidence 998754321 111 222222111 1 1257999999999987 44432
Q ss_pred EEEecCCCCCceeE-EEEE-ecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEE
Q 003371 550 LHVETFNSEKKRSG-VLIR-RKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAF 627 (825)
Q Consensus 550 ~~~~~F~s~~krms-vvv~-~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~l 627 (825)
+||.++.+.+. .-++ ..+|..++ -|+++.+.+ ++ ..+.+.++.+..+|+|++++
T Consensus 498 ---~~~~~~~~~~~g~Gv~~~~~g~~~~---ig~~~~~~~--------------~~----~~~~~~~~~~~~~g~~~v~v 553 (741)
T PRK11033 498 ---IPEAESQRALAGSGIEGQVNGERVL---ICAPGKLPP--------------LA----DAFAGQINELESAGKTVVLV 553 (741)
T ss_pred ---CCCCcceEEEeeEEEEEEECCEEEE---Eecchhhhh--------------cc----HHHHHHHHHHHhCCCEEEEE
Confidence 46666666552 2122 12343333 388877632 11 23445567889999999999
Q ss_pred EEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccc
Q 003371 628 AYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRL 707 (825)
Q Consensus 628 A~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~ 707 (825)
|+ |.+++|+++++||+|||++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 554 a~-----------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-- 608 (741)
T PRK11033 554 LR-----------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-- 608 (741)
T ss_pred EE-----------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--
Confidence 97 44799999999999999999999999999999999999999999999999994
Q ss_pred ccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCC
Q 003371 708 DQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQ 787 (825)
Q Consensus 708 ~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~ 787 (825)
++++.+|+||..+|+.||+. +.|+|+|||+||+|||++|||||||| +
T Consensus 609 -------------------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g-~ 655 (741)
T PRK11033 609 -------------------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG-S 655 (741)
T ss_pred -------------------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEec-C
Confidence 46789999999999999965 68999999999999999999999999 8
Q ss_pred chHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 788 GTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 788 gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
|+++++++||+++++|++..|+.++++||+++.||.
T Consensus 656 ~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~ 691 (741)
T PRK11033 656 GTDVALETADAALTHNRLRGLAQMIELSRATHANIR 691 (741)
T ss_pred CCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999985
No 24
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.7e-76 Score=685.34 Aligned_cols=459 Identities=39% Similarity=0.574 Sum_probs=404.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-hhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecC
Q 003371 201 VAVFLVIVVSAFSNFRQARQFDKLSK-ISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDE 279 (825)
Q Consensus 201 ~~v~lv~~v~~~~~~~~~~~~~~l~~-~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDE 279 (825)
+++++..+++.+.+++.++..++|.+ ..++..++|+|+| +++|++.+|+|||+|.+++||+|||||++++|+. .|||
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vde 81 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVDE 81 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEEc
Confidence 34556667778888888888888865 3567899999999 9999999999999999999999999999999965 9999
Q ss_pred CCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHH-HHHHHHHHHH
Q 003371 280 SSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLT-STIGKVGLAV 358 (825)
Q Consensus 280 S~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a-~~i~~~~l~~ 358 (825)
|+|||||.|+.|. .++.+++||.+.+|..++.|+.+|.+|..+++...+......++|+|+++++++ .++..+.+++
T Consensus 82 s~LTGEs~pv~k~--~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~l 159 (499)
T TIGR01494 82 SNLTGESVPVLKT--AGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLI 159 (499)
T ss_pred ccccCCCCCeeec--cCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 477899999999999999999999999999999999877777899999999999 7888888888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccc
Q 003371 359 AFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAM 438 (825)
Q Consensus 359 a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~l 438 (825)
++++++.|+..+... . .+...|..++++++++|||+||++++++++++..+|.++|++
T Consensus 160 a~~~~~~~~~~~~~~--------~--------------~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gil 217 (499)
T TIGR01494 160 ALAVFLFWAIGLWDP--------N--------------SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIV 217 (499)
T ss_pred HHHHHHHHHHHHccc--------c--------------cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcE
Confidence 777777664321100 0 245678889999999999999999999999999999999999
Q ss_pred cccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcce
Q 003371 439 VRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAE 518 (825)
Q Consensus 439 vr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~ 518 (825)
+|+++++|+||++++||||||||||+|+|+|++++..+. .+
T Consensus 218 vk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~---------------------------------------~~ 258 (499)
T TIGR01494 218 VRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG---------------------------------------EY 258 (499)
T ss_pred EechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC---------------------------------------Cc
Confidence 999999999999999999999999999999999875421 02
Q ss_pred ecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCe
Q 003371 519 FSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGV 598 (825)
Q Consensus 519 ~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~ 598 (825)
.++||.|.|+++++. .. .+...||++.+++|+++++..+ + .|+||+++.+++.|.+
T Consensus 259 ~s~hp~~~ai~~~~~-~~------------~~~~~~f~~~~~~~~~~~~~~~-~---~~~~G~~~~i~~~~~~------- 314 (499)
T TIGR01494 259 LSGHPDERALVKSAK-WK------------ILNVFEFSSVRKRMSVIVRGPD-G---TYVKGAPEFVLSRVKD------- 314 (499)
T ss_pred CCCChHHHHHHHHhh-hc------------CcceeccCCCCceEEEEEecCC-c---EEEeCCHHHHHHhhHH-------
Confidence 367999999999886 21 2356899999999999887522 2 4689999999998852
Q ss_pred eecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHH
Q 003371 599 IKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQ 678 (825)
Q Consensus 599 ~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~ 678 (825)
+.+.+++++.+|+|++++|++. +++|+++++|++||+++++|+.|+
T Consensus 315 -----------~~~~~~~~~~~g~~~~~~a~~~-----------------------~~~g~i~l~d~lr~~~~~~i~~l~ 360 (499)
T TIGR01494 315 -----------LEEKVKELAQSGLRVLAVASKE-----------------------TLLGLLGLEDPLRDDAKETISELR 360 (499)
T ss_pred -----------HHHHHHHHHhCCCEEEEEEECC-----------------------eEEEEEEecCCCchhHHHHHHHHH
Confidence 1234456788999999999832 589999999999999999999999
Q ss_pred hCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhC
Q 003371 679 SAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK 758 (825)
Q Consensus 679 ~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~ 758 (825)
++|++++|+|||+..+|..+|+++|| ++|++|+||..+|+.+|+.
T Consensus 361 ~~gi~~~~ltGD~~~~a~~ia~~lgi-----------------------------------~~~~~p~~K~~~v~~l~~~ 405 (499)
T TIGR01494 361 EAGIRVIMLTGDNVLTAKAIAKELGI-----------------------------------FARVTPEEKAALVEALQKK 405 (499)
T ss_pred HCCCeEEEEcCCCHHHHHHHHHHcCc-----------------------------------eeccCHHHHHHHHHHHHHC
Confidence 99999999999999999999999986 5889999999999999999
Q ss_pred CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 759 GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 759 g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
|+.|+|+|||+||+|||++|||||||| |+++||++|++|++..++.++++||+++.||.
T Consensus 406 g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~ 464 (499)
T TIGR01494 406 GRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIK 464 (499)
T ss_pred CCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997 79999999999999999999999999999884
No 25
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.4e-74 Score=675.54 Aligned_cols=504 Identities=28% Similarity=0.420 Sum_probs=413.2
Q ss_pred HHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCC-EEEEEEecCcc
Q 003371 172 LLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREA-RRLQISIFDLV 250 (825)
Q Consensus 172 l~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g-~~~~I~~~dLv 250 (825)
+.++++++++++ .|.++..|++.+++..+++.+.+++.++..++|.+. .+..++|+|+| ++++|+.++|+
T Consensus 5 ~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~-~~~~~~v~r~~g~~~~i~~~~l~ 75 (556)
T TIGR01525 5 MALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLAL-APSTARVLQGDGSEEEVPVEELQ 75 (556)
T ss_pred HHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCCeEEEEEHHHCC
Confidence 344555566665 377777777777777777777777777777777644 45689999995 99999999999
Q ss_pred cCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhc
Q 003371 251 VGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSI 330 (825)
Q Consensus 251 vGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~ 330 (825)
|||+|.+++||+|||||++++|+. .||||+|||||.|+.|. .++.+|+||.+.+|.++++|+++|.+|++|++.+.+
T Consensus 76 ~GDiv~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~--~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~ 152 (556)
T TIGR01525 76 VGDIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKK--EGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLV 152 (556)
T ss_pred CCCEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecC--CcCEEeeceEECCceEEEEEEEecccCHHHHHHHHH
Confidence 999999999999999999999986 89999999999999998 578999999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHH
Q 003371 331 SSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVV 410 (825)
Q Consensus 331 ~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilv 410 (825)
.+...+++|+|+.+++++.++.++++++++++|++|+. .+. . ..+..++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~---~~~----------------------~--~~~~~~~~vlv 205 (556)
T TIGR01525 153 EEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA---LGA----------------------L--GALYRALAVLV 205 (556)
T ss_pred HHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcc----------------------c--hHHHHHHHHHh
Confidence 88888899999999999999999999999888887642 110 1 45778899999
Q ss_pred HHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChH
Q 003371 411 VAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASS 490 (825)
Q Consensus 411 vavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~ 490 (825)
++|||+||+++++++++++++|.++|+++|+++++|+||++++||||||||||+|+|+|.+++..+... .+
T Consensus 206 ~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------~~-- 276 (556)
T TIGR01525 206 VACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------IS-- 276 (556)
T ss_pred hccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------cc--
Confidence 999999999999999999999999999999999999999999999999999999999999987653311 00
Q ss_pred HHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecC
Q 003371 491 IRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKA 570 (825)
Q Consensus 491 ~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~ 570 (825)
..+++..+..+ . ..+.||+++|+++++. +.+.+... . ++ ...+ .
T Consensus 277 ~~~~l~~a~~~------e---------~~~~hp~~~Ai~~~~~-~~~~~~~~--~-~~-~~~~----------------~ 320 (556)
T TIGR01525 277 EEELLALAAAL------E---------QSSSHPLARAIVRYAK-KRGLELPK--Q-ED-VEEV----------------P 320 (556)
T ss_pred HHHHHHHHHHH------h---------ccCCChHHHHHHHHHH-hcCCCccc--c-cC-eeEe----------------c
Confidence 11122111111 1 1257999999999997 55544221 0 00 0000 1
Q ss_pred CCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhh
Q 003371 571 DNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLK 650 (825)
Q Consensus 571 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~ 650 (825)
+..+..+++|+++..+..|+.. ..++. ....++..++.++.+|+|++.++.
T Consensus 321 ~~gi~~~~~g~~~~~lg~~~~~-~~~~~-------~~~~~~~~~~~~~~~g~~~~~v~~--------------------- 371 (556)
T TIGR01525 321 GKGVEATVDGQEEVRIGNPRLL-ELAAE-------PISASPDLLNEGESQGKTVVFVAV--------------------- 371 (556)
T ss_pred CCeEEEEECCeeEEEEecHHHH-hhcCC-------CchhhHHHHHHHhhCCcEEEEEEE---------------------
Confidence 1113334444444444444321 11111 111233556778899999999986
Q ss_pred ccCeEEeeeecccCCCcccHHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHH
Q 003371 651 EEGLTLLGIVGIKDPCRPGVQKAVEACQSAG-VEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEE 729 (825)
Q Consensus 651 e~~l~llG~v~i~DplR~~v~~aI~~l~~aG-I~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~ 729 (825)
|.+++|.+.++|++|||++++|+.|+++| +++.|+|||+..++.++++++||..
T Consensus 372 --~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~----------------------- 426 (556)
T TIGR01525 372 --DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE----------------------- 426 (556)
T ss_pred --CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-----------------------
Confidence 34799999999999999999999999999 9999999999999999999999954
Q ss_pred HHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHH
Q 003371 730 RIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVA 809 (825)
Q Consensus 730 ~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv 809 (825)
+|++..|+||..+++.+++.++.|+|+|||.||+||+++||||++|| .+++.+++.||+++.+|+++.|+
T Consensus 427 ---------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~ 496 (556)
T TIGR01525 427 ---------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLP 496 (556)
T ss_pred ---------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHH
Confidence 79999999999999999999999999999999999999999999999 89999999999999999999999
Q ss_pred HHHHHhHHhhcccc
Q 003371 810 TVLSPGDQLHSGCF 823 (825)
Q Consensus 810 ~~i~~gR~i~~ni~ 823 (825)
.++++||+++.||.
T Consensus 497 ~~i~~~r~~~~~i~ 510 (556)
T TIGR01525 497 TAIDLSRKTRRIIK 510 (556)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999985
No 26
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.9e-73 Score=661.97 Aligned_cols=483 Identities=26% Similarity=0.378 Sum_probs=403.5
Q ss_pred HHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcc
Q 003371 171 ILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLV 250 (825)
Q Consensus 171 il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLv 250 (825)
++.++++++++++ .|+|+..|++.+++..+++.+.+++.++..++|.+. .+.+++|+|+|++++|++++|+
T Consensus 4 l~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~-~~~~~~v~r~g~~~~i~~~~l~ 74 (536)
T TIGR01512 4 LMALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALMEL-APDTARVLRGGSLEEVAVEELK 74 (536)
T ss_pred HHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCEEEEEEHHHCC
Confidence 3455666677665 489998777777777777777777777777777654 4678999999999999999999
Q ss_pred cCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhc
Q 003371 251 VGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSI 330 (825)
Q Consensus 251 vGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~ 330 (825)
|||+|.+++||+|||||++++|+. .||||+|||||.|+.|. .++.+|+||.+.+|.++++|+++|.+|.+|++.+++
T Consensus 75 ~GDiv~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~--~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~ 151 (536)
T TIGR01512 75 VGDVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKA--PGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLV 151 (536)
T ss_pred CCCEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeC--CCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHH
Confidence 999999999999999999999986 89999999999999998 578999999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHH
Q 003371 331 SSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVV 410 (825)
Q Consensus 331 ~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilv 410 (825)
.+...+++|+|+.+++++.++.++.+++++++++++. +... | . ..+..++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---------~------------~--~~~~~~~svlv 205 (536)
T TIGR01512 152 EEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPG---LLKR---------W------------P--FWVYRALVLLV 205 (536)
T ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhcc---------c------------H--HHHHHHHHHHh
Confidence 8888889999999999999999998888877776642 2110 0 1 15777899999
Q ss_pred HHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChH
Q 003371 411 VAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASS 490 (825)
Q Consensus 411 vavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~ 490 (825)
++|||+||++++++++.++++|.++|+++|+++++|++|+++++|||||||||+|+|+|.+++..
T Consensus 206 ~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~--------------- 270 (536)
T TIGR01512 206 VASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA--------------- 270 (536)
T ss_pred hcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------
Confidence 99999999999999999999999999999999999999999999999999999999999987531
Q ss_pred HHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCc--eeEEEEEe
Q 003371 491 IRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKK--RSGVLIRR 568 (825)
Q Consensus 491 ~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~k--rmsvvv~~ 568 (825)
+++....++. ..+.||.++|+++++. +.+ ||++.+. ..++....
T Consensus 271 --~~l~~a~~~e---------------~~~~hp~~~Ai~~~~~-~~~----------------~~~~~~~~~g~gi~~~~ 316 (536)
T TIGR01512 271 --EVLRLAAAAE---------------QASSHPLARAIVDYAR-KRE----------------NVESVEEVPGEGVRAVV 316 (536)
T ss_pred --HHHHHHHHHh---------------ccCCCcHHHHHHHHHH-hcC----------------CCcceEEecCCeEEEEE
Confidence 2222221111 1256999999999987 432 1222111 12222222
Q ss_pred cCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhh
Q 003371 569 KADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQR 648 (825)
Q Consensus 569 ~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~ 648 (825)
+|.+++ .|+++.+.+.. + ..+..+|.+++.++.
T Consensus 317 -~g~~~~---ig~~~~~~~~~------------~------------~~~~~~~~~~~~v~~------------------- 349 (536)
T TIGR01512 317 -DGGEVR---IGNPRSLEAAV------------G------------ARPESAGKTIVHVAR------------------- 349 (536)
T ss_pred -CCeEEE---EcCHHHHhhcC------------C------------cchhhCCCeEEEEEE-------------------
Confidence 333333 48876553211 0 034566777766654
Q ss_pred hhccCeEEeeeecccCCCcccHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCH
Q 003371 649 LKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV-EIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTD 727 (825)
Q Consensus 649 ~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI-~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~ 727 (825)
|..++|.+.++|++|||++++|+.|+++|+ ++.|+|||+..+|..+++++||..
T Consensus 350 ----~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~--------------------- 404 (536)
T TIGR01512 350 ----DGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE--------------------- 404 (536)
T ss_pred ----CCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------
Confidence 457999999999999999999999999999 999999999999999999999964
Q ss_pred HHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchH
Q 003371 728 EERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTS 807 (825)
Q Consensus 728 ~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~s 807 (825)
+|++..|++|..+++.+++.++.|+|+|||.||+||+++||+|++||.+|++.++++||+++++|+++.
T Consensus 405 -----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~ 473 (536)
T TIGR01512 405 -----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSR 473 (536)
T ss_pred -----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHH
Confidence 688999999999999999999999999999999999999999999997789999999999999999999
Q ss_pred HHHHHHHhHHhhcccc
Q 003371 808 VATVLSPGDQLHSGCF 823 (825)
Q Consensus 808 Iv~~i~~gR~i~~ni~ 823 (825)
|.+++++||+++.||.
T Consensus 474 l~~~i~~~r~~~~~i~ 489 (536)
T TIGR01512 474 LPQAIRLARRTRRIVK 489 (536)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999884
No 27
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-74 Score=657.04 Aligned_cols=539 Identities=24% Similarity=0.342 Sum_probs=426.2
Q ss_pred CccHHHHHHHHhhhHHHH---HHHHHHHHHhhhcc-------ccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH--
Q 003371 153 PKGLLHFVLEAFKDTTIL---ILLVCAALSLGFGI-------KEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQ-- 220 (825)
Q Consensus 153 ~~s~~~~~~~~~~~~~~~---il~v~a~lsl~~g~-------~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~-- 220 (825)
.++|+.-.|.++++...- +..++...++++++ .. ..+..+||.-.|++.++.+ .+|.+.+.
T Consensus 291 G~~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~-~~~~tfFdt~~MLi~fi~l------gr~LE~~Ak~ 363 (951)
T KOG0207|consen 291 GRPFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVF-DSPPTFFDTSPMLITFITL------GRWLESLAKG 363 (951)
T ss_pred ceeeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHc-cCcchhccccHHHHHHHHH------HHHHHHHhhc
Confidence 567777777777764211 11122222222221 11 2244577777776665554 56654443
Q ss_pred -----HHHHhchhCCCeeEEEeCCE-EEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCC
Q 003371 221 -----FDKLSKISNNIKVEVVREAR-RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDST 294 (825)
Q Consensus 221 -----~~~l~~~~~~~~v~V~R~g~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~ 294 (825)
..+|-.+ .+.++.++-+|+ .++|++..|.+||+|.+.||++||+||++++|++ .||||.+|||+.||.|.
T Consensus 364 kts~alskLmsl-~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk-- 439 (951)
T KOG0207|consen 364 KTSEALSKLMSL-APSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKK-- 439 (951)
T ss_pred cchHHHHHHhhc-CcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccC--
Confidence 3344333 456788888886 8999999999999999999999999999999998 99999999999999998
Q ss_pred CCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 003371 295 NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGN 374 (825)
Q Consensus 295 ~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~ 374 (825)
.+..+.+||.+.+|+..+.+|++|.+|.+++|.+++++++..++|+|+.+|+++.+|.++.+++++++|++|++..++..
T Consensus 440 ~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~ 519 (951)
T KOG0207|consen 440 KGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVF 519 (951)
T ss_pred CCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccc
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999865333211
Q ss_pred CCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEE
Q 003371 375 TKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVI 454 (825)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~I 454 (825)
.. ... ++..+...|..+++++++||||+|.||+|++...+....+++|+|+|..+++|.+.++++|
T Consensus 520 ~~----~~~----------~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tV 585 (951)
T KOG0207|consen 520 KY----PRS----------FFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTV 585 (951)
T ss_pred cC----cch----------hhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEE
Confidence 00 111 1236778889999999999999999999999999999999999999999999999999999
Q ss_pred EecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHH
Q 003371 455 CTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVL 534 (825)
Q Consensus 455 c~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~ 534 (825)
.||||||||+|+++|+++....+.... .+.+.+. .+. +..+.||..+|+.+|+.
T Consensus 586 vFDKTGTLT~G~~~V~~~~~~~~~~~~-------~e~l~~v-~a~-----------------Es~SeHPig~AIv~yak- 639 (951)
T KOG0207|consen 586 VFDKTGTLTEGKPTVVDFKSLSNPISL-------KEALALV-AAM-----------------ESGSEHPIGKAIVDYAK- 639 (951)
T ss_pred EEcCCCceecceEEEEEEEecCCcccH-------HHHHHHH-HHH-----------------hcCCcCchHHHHHHHHH-
Confidence 999999999999999998776543110 0111111 111 11256999999999998
Q ss_pred HcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHH
Q 003371 535 EMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENII 614 (825)
Q Consensus 535 ~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i 614 (825)
+.... .....++....|..+.+...+.+ +++++ .-|.-+++... |... .+.+++..
T Consensus 640 ~~~~~----~~~~~~~~~~~~pg~g~~~~~~~---~~~~i---~iGN~~~~~r~--------~~~~------~~~i~~~~ 695 (951)
T KOG0207|consen 640 EKLVE----PNPEGVLSFEYFPGEGIYVTVTV---DGNEV---LIGNKEWMSRN--------GCSI------PDDILDAL 695 (951)
T ss_pred hcccc----cCccccceeecccCCCcccceEE---eeeEE---eechHHHHHhc--------CCCC------chhHHHhh
Confidence 44311 11112223333433332212222 23333 34887777542 2211 23367777
Q ss_pred HHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHH
Q 003371 615 HGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFT 694 (825)
Q Consensus 615 ~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~t 694 (825)
++....|..+.+++. |-++.|+++++|++|||+..+|+.||+.||+|.|+||||..|
T Consensus 696 ~~~e~~g~tvv~v~v-----------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~a 752 (951)
T KOG0207|consen 696 TESERKGQTVVYVAV-----------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAA 752 (951)
T ss_pred hhHhhcCceEEEEEE-----------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHH
Confidence 777889999998887 457999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHH
Q 003371 695 AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPA 774 (825)
Q Consensus 695 A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapA 774 (825)
|+++|+++||.. |+|...|+||.+.|+.||++++.|||+|||+||+||
T Consensus 753 A~svA~~VGi~~--------------------------------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPA 800 (951)
T KOG0207|consen 753 ARSVAQQVGIDN--------------------------------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPA 800 (951)
T ss_pred HHHHHHhhCcce--------------------------------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHH
Confidence 999999999654 999999999999999999999999999999999999
Q ss_pred hhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccc
Q 003371 775 LKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGC 822 (825)
Q Consensus 775 Lk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni 822 (825)
|.+|||||+|| .|+++|.|+|||||+.+|+..++.+++.+|+...+|
T Consensus 801 LA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rI 847 (951)
T KOG0207|consen 801 LAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRI 847 (951)
T ss_pred HHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhH
Confidence 99999999999 789999999999999999999999999999988877
No 28
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=3.3e-72 Score=653.76 Aligned_cols=477 Identities=28% Similarity=0.415 Sum_probs=393.1
Q ss_pred CcchhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHhchhCCCeeEEEeC-CEEEEEEecCcccCeEEEeCCCCeeeceEE
Q 003371 191 EGWYEGGSIFVAVFLV-IVVSAFSNFRQARQFDKLSKISNNIKVEVVRE-ARRLQISIFDLVVGDIVFLKIGDQIPADGL 268 (825)
Q Consensus 191 ~~~~d~~~i~~~v~lv-~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~-g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgi 268 (825)
.+||+..+++++++++ -.++....++.++..++|.+. .+..++|+|+ |++++|++++|+|||+|.+++||+|||||+
T Consensus 51 ~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~-~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~ 129 (562)
T TIGR01511 51 HTFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKL-QPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGT 129 (562)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceE
Confidence 4688888776555444 355555555666666666544 4567888885 677999999999999999999999999999
Q ss_pred EEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHH
Q 003371 269 FLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLT 348 (825)
Q Consensus 269 li~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a 348 (825)
+++|++ .||||+|||||.|+.|. .++.+|+||.+.+|.+.++|+++|.+|.+|++.+++.+....++|+|+.+++++
T Consensus 130 v~~g~~-~vdes~lTGEs~pv~k~--~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a 206 (562)
T TIGR01511 130 VIEGES-EVDESLVTGESLPVPKK--VGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVA 206 (562)
T ss_pred EEECce-EEehHhhcCCCCcEEcC--CCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 999987 89999999999999998 578999999999999999999999999999999999998889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Q 003371 349 STIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYS 428 (825)
Q Consensus 349 ~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~ 428 (825)
.++.++++++++++|++|. ..+..++++++++|||+|++++|+++..+
T Consensus 207 ~~~~~~v~~~a~~~~~~~~--------------------------------~~~~~~~svlvvacPcaL~la~p~a~~~~ 254 (562)
T TIGR01511 207 GYFVPVVIAIALITFVIWL--------------------------------FALEFAVTVLIIACPCALGLATPTVIAVA 254 (562)
T ss_pred HHHHHHHHHHHHHHHHHHH--------------------------------HHHHHHHHHHHHhccchhhhHHHHHHHHH
Confidence 9999998888888777652 13567899999999999999999999999
Q ss_pred HHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCcccc
Q 003371 429 MKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVS 508 (825)
Q Consensus 429 ~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~ 508 (825)
+.+++++|+++|+++++|+|+++++||||||||||+|+|+|++++..+... .++++.+ ..++.
T Consensus 255 ~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~--------~~~~l~~---aa~~e------ 317 (562)
T TIGR01511 255 TGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRD--------RTELLAL---AAALE------ 317 (562)
T ss_pred HHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCC--------HHHHHHH---HHHHh------
Confidence 999999999999999999999999999999999999999999987543210 0122222 11111
Q ss_pred ccCCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHh
Q 003371 509 KLKPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAM 588 (825)
Q Consensus 509 ~~~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~ 588 (825)
..+.||.++|+++++. +.+.+.... .+|... ...++.... ++.++ ..|+++.+.+.
T Consensus 318 ---------~~s~HPia~Ai~~~~~-~~~~~~~~~---------~~~~~~-~g~Gi~~~~-~g~~~---~iG~~~~~~~~ 373 (562)
T TIGR01511 318 ---------AGSEHPLAKAIVSYAK-EKGITLVEV---------SDFKAI-PGIGVEGTV-EGTKI---QLGNEKLLGEN 373 (562)
T ss_pred ---------ccCCChHHHHHHHHHH-hcCCCcCCC---------CCeEEE-CCceEEEEE-CCEEE---EEECHHHHHhC
Confidence 1256999999999987 555432111 111111 112333322 33333 45888876431
Q ss_pred cccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcc
Q 003371 589 CSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRP 668 (825)
Q Consensus 589 c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~ 668 (825)
|. .++ ++..+|.+++.++. |.+++|++.++|++||
T Consensus 374 --------~~--~~~------------~~~~~g~~~~~~~~-----------------------~~~~~g~~~~~d~l~~ 408 (562)
T TIGR01511 374 --------AI--KID------------GKAEQGSTSVLVAV-----------------------NGELAGVFALEDQLRP 408 (562)
T ss_pred --------CC--CCC------------hhhhCCCEEEEEEE-----------------------CCEEEEEEEecccccH
Confidence 11 011 13467888887765 5579999999999999
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHH
Q 003371 669 GVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDK 748 (825)
Q Consensus 669 ~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK 748 (825)
|++++|+.|++.|+++.|+|||+..+|.++|+++||. ++++..|++|
T Consensus 409 ~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 409 EAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---------------------------------VRAEVLPDDK 455 (562)
T ss_pred HHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---------------------------------EEccCChHHH
Confidence 9999999999999999999999999999999999993 5888999999
Q ss_pred HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 749 LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 749 ~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
..+++.++++++.|+|+|||.||+||+++|||||+|| .|+++++++||+++++|+++.|+.++++||+++.||.
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~ 529 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIK 529 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 7999999999999999999999999999999998874
No 29
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=6.6e-72 Score=680.99 Aligned_cols=491 Identities=25% Similarity=0.355 Sum_probs=403.2
Q ss_pred cchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEE
Q 003371 192 GWYEGGSIFVAV-FLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFL 270 (825)
Q Consensus 192 ~~~d~~~i~~~v-~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili 270 (825)
.|||..++++.+ ++--+++.....+..+..++|.+. .+..++|+|+|++++|+.++|+|||+|.+++||+|||||+++
T Consensus 284 ~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l-~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~ 362 (834)
T PRK10671 284 LYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDL-TPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT 362 (834)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE
Confidence 477765554433 333444444444555555555544 457889999999999999999999999999999999999999
Q ss_pred ecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHH
Q 003371 271 DGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTST 350 (825)
Q Consensus 271 ~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~ 350 (825)
+|+. .||||+|||||.|+.|. .++.+|+||.+.+|.+.++|+++|.+|.+|++.+++++.+..++|+|+..++++.+
T Consensus 363 ~g~~-~vdeS~lTGEs~pv~k~--~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~ 439 (834)
T PRK10671 363 QGEA-WLDEAMLTGEPIPQQKG--EGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAV 439 (834)
T ss_pred EceE-EEeehhhcCCCCCEecC--CCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 9975 99999999999999998 57899999999999999999999999999999999998888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 003371 351 IGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMK 430 (825)
Q Consensus 351 i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~ 430 (825)
+.+++++++++++++|+. .+.. ..+...+..++++++++|||+|++++|++++.++.
T Consensus 440 ~v~~v~~~a~~~~~~~~~---~~~~--------------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~ 496 (834)
T PRK10671 440 FVPVVVVIALVSAAIWYF---FGPA--------------------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVG 496 (834)
T ss_pred HHHHHHHHHHHHHHHHHH---hCCc--------------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHH
Confidence 999999999888887632 2210 02445677899999999999999999999999999
Q ss_pred HHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCcccccc
Q 003371 431 RMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKL 510 (825)
Q Consensus 431 ~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~ 510 (825)
+++++|+|+|+++++|+|++++++|||||||||+|+|+|.+++..+.. ++ .+++....++.+
T Consensus 497 ~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~---------~~--~~~l~~a~~~e~------- 558 (834)
T PRK10671 497 RAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV---------DE--AQALRLAAALEQ------- 558 (834)
T ss_pred HHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC---------CH--HHHHHHHHHHhC-------
Confidence 999999999999999999999999999999999999999988653321 11 122222222221
Q ss_pred CCCCCcceecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcc
Q 003371 511 KPGSSVAEFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCS 590 (825)
Q Consensus 511 ~~~~~~~~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~ 590 (825)
.+.||.++|+++++. ..... ...+|..... .++.... +|. .+++|+++.+....
T Consensus 559 --------~s~hp~a~Ai~~~~~-~~~~~-----------~~~~~~~~~g-~Gv~~~~-~g~---~~~~G~~~~~~~~~- 612 (834)
T PRK10671 559 --------GSSHPLARAILDKAG-DMTLP-----------QVNGFRTLRG-LGVSGEA-EGH---ALLLGNQALLNEQQ- 612 (834)
T ss_pred --------CCCCHHHHHHHHHHh-hCCCC-----------CcccceEecc-eEEEEEE-CCE---EEEEeCHHHHHHcC-
Confidence 256999999999875 22110 1122332221 2332222 333 24569999775321
Q ss_pred cccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccH
Q 003371 591 HYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGV 670 (825)
Q Consensus 591 ~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v 670 (825)
++ +..+.+.++.++.+|.+++.+|+ +..++|++++.|++||++
T Consensus 613 -----------~~---~~~~~~~~~~~~~~g~~~v~va~-----------------------~~~~~g~~~l~d~~r~~a 655 (834)
T PRK10671 613 -----------VD---TKALEAEITAQASQGATPVLLAV-----------------------DGKAAALLAIRDPLRSDS 655 (834)
T ss_pred -----------CC---hHHHHHHHHHHHhCCCeEEEEEE-----------------------CCEEEEEEEccCcchhhH
Confidence 11 23456667788899999999987 335899999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHH
Q 003371 671 QKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLL 750 (825)
Q Consensus 671 ~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~ 750 (825)
+++|+.|++.|+++.|+|||+..+|.++|+++||.. ++++..|++|..
T Consensus 656 ~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~--------------------------------~~~~~~p~~K~~ 703 (834)
T PRK10671 656 VAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE--------------------------------VIAGVLPDGKAE 703 (834)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE--------------------------------EEeCCCHHHHHH
Confidence 999999999999999999999999999999999964 799999999999
Q ss_pred HHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhcccc
Q 003371 751 MVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGCF 823 (825)
Q Consensus 751 lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni~ 823 (825)
+++.++.+++.|+|+|||.||+|||+.||+||+|| +|++.++++||+++++|++..|+.++++||.++.||.
T Consensus 704 ~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~ 775 (834)
T PRK10671 704 AIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMK 775 (834)
T ss_pred HHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 8999999999999999999999999999999988763
No 30
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-74 Score=638.41 Aligned_cols=598 Identities=22% Similarity=0.317 Sum_probs=460.7
Q ss_pred CCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHH
Q 003371 127 YGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLV 206 (825)
Q Consensus 127 ~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv 206 (825)
+|+. .+.++..-.+.||.|++..+. .+|-+++.|.-..|++.+..+|..+++.= +.||.++ +.++..
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~v-PtF~eLFkE~A~aPfFVFQVFcvgLWCLD--------eyWYySl---FtLfMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIVV-PTFSELFKEHAVAPFFVFQVFCVGLWCLD--------EYWYYSL---FTLFML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccCC-ccHHHHHHHhccCceeeHhHHhHHHHHhH--------HHHHHHH---HHHHHH
Confidence 5776 455777777789999999875 48999999999999999999998888643 4688754 334445
Q ss_pred HHHHHHHHHHHHHHHHHHhchhC-CCeeEEEeCCEEEEEEecCcccCeEEEeCC---CCeeeceEEEEecCcceecCCCC
Q 003371 207 IVVSAFSNFRQARQFDKLSKISN-NIKVEVVREARRLQISIFDLVVGDIVFLKI---GDQIPADGLFLDGHSLQVDESSM 282 (825)
Q Consensus 207 ~~v~~~~~~~~~~~~~~l~~~~~-~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~---Gd~VPaDgili~g~~l~VDES~L 282 (825)
+.+++.--++|.+...++.+..+ +..+.|+|+++|+.+...||+|||+|.+.. ...||||.+++.|++ .|||++|
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eechhhh
Confidence 55666666777777777766644 468999999999999999999999999976 558999999999987 8999999
Q ss_pred CCCCCeeeecCC---------------CCceeeeCceee-------------eceEEEEEEEEcccchHHHHHhhccCCC
Q 003371 283 TGESDHVEVDST---------------NNPFLFSGSKVA-------------DGYAQMLVVSVGMNTAWGEMMSSISSDS 334 (825)
Q Consensus 283 TGEs~pv~k~~~---------------~~~~l~sGt~v~-------------~G~~~~~V~~vG~~T~~g~i~~~~~~~~ 334 (825)
||||.|..|.+- +...||.||+++ ||-+.+.|++||.+|..|++++.+....
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 999999998741 456899999997 4788999999999999999999998766
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhc
Q 003371 335 NERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIP 414 (825)
Q Consensus 335 ~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP 414 (825)
++-|.-... . +.+++.+++|.+....|.+.....+... +-...|.-++.|+...+|
T Consensus 387 ervTaNn~E--t-------f~FILFLlVFAiaAa~Yvwv~Gskd~~R---------------srYKL~LeC~LIlTSVvP 442 (1160)
T KOG0209|consen 387 ERVTANNRE--T-------FIFILFLLVFAIAAAGYVWVEGSKDPTR---------------SRYKLFLECTLILTSVVP 442 (1160)
T ss_pred eeeeeccHH--H-------HHHHHHHHHHHHHhhheEEEecccCcch---------------hhhheeeeeeEEEeccCC
Confidence 665532221 1 1123333444444444433221111101 222345667778888899
Q ss_pred cchhHHHHHHHHHHHHHHhccccccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccc-cccccccccCChHHHH
Q 003371 415 EGLPLAVTLTLAYSMKRMMTDQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQE-SIVQETYCKIASSIRD 493 (825)
Q Consensus 415 ~~Lplavtl~la~~~~~m~k~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~-~~~~~~~~~~~~~~~~ 493 (825)
.-||+-++++..-+...+.|.+++|..+-.+.-.|+++..|||||||||+..|.|..+.-... .......+..+.+...
T Consensus 443 pELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~ 522 (1160)
T KOG0209|consen 443 PELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVL 522 (1160)
T ss_pred CCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHH
Confidence 999999999999999999999999999999999999999999999999999999998754221 1111122233333433
Q ss_pred HHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHHHcCCc-h----HHHhhcceEEEEecCCCCCceeEEEEEe
Q 003371 494 LFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVLEMGME-M----DKVKQKYSILHVETFNSEKKRSGVLIRR 568 (825)
Q Consensus 494 ~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~~g~~-~----~~~~~~~~i~~~~~F~s~~krmsvvv~~ 568 (825)
.+. .|+ +.... ++ ...|+|.|+|.+++..+.+..+ . +..-...+|.+.+.|+|..|||+|++..
T Consensus 523 vlA----scH--sLv~l-e~----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~ 591 (1160)
T KOG0209|consen 523 VLA----SCH--SLVLL-ED----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASH 591 (1160)
T ss_pred HHH----HHH--HHHHh-cC----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhc
Confidence 332 222 22221 11 2799999999999663222111 0 1111246789999999999999999876
Q ss_pred cCC---CeEEEEEcCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHH
Q 003371 569 KAD---NTTHIHWKGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKA 645 (825)
Q Consensus 569 ~~~---~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~ 645 (825)
... .++.+.+|||||.|..+-. +.+..++++..+++.+|.||+|++||++.. -......+.
T Consensus 592 ~~~g~s~k~~~aVKGAPEvi~~ml~--------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~--~~~~q~rd~ 655 (1160)
T KOG0209|consen 592 QGPGSSEKYFVAVKGAPEVIQEMLR--------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGD--MMVSQVRDL 655 (1160)
T ss_pred ccCCCceEEEEEecCCHHHHHHHHH--------------hCchhHHHHHHHHhhccceEEEEecccccc--cchhhhhhh
Confidence 432 2578899999999987754 345678889999999999999999999963 111112224
Q ss_pred hhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccc-----------c----
Q 003371 646 RQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQ-----------Q---- 710 (825)
Q Consensus 646 ~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~-----------~---- 710 (825)
+++..|++|+|.|++.|.-|+||+++++|+.+++.+.+|+|+||||+.||.++|+++||....- .
T Consensus 656 ~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w 735 (1160)
T KOG0209|consen 656 KREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEW 735 (1160)
T ss_pred hhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeE
Confidence 5777899999999999999999999999999999999999999999999999999999986410 0
Q ss_pred ---------------------cccceeeechhhhcCCH-HHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCC
Q 003371 711 ---------------------VEKGEVVEGVEFRNYTD-EERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDG 768 (825)
Q Consensus 711 ---------------------~~~~~vi~G~~~~~~~~-~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG 768 (825)
....++++|..+..+.. +++.+.++.+.||||++|.||..++..||+.|++++|+|||
T Consensus 736 ~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDG 815 (1160)
T KOG0209|consen 736 VSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDG 815 (1160)
T ss_pred ecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCC
Confidence 02346788888887765 45778899999999999999999999999999999999999
Q ss_pred ccCHHHhhhCCccEecCCCchH
Q 003371 769 TNDAPALKEADVGLSMGIQGTE 790 (825)
Q Consensus 769 ~NDapALk~AdVGiamg~~gt~ 790 (825)
+||+.|||+||||+|+= ++++
T Consensus 816 TNDVGALK~AhVGVALL-~~~~ 836 (1160)
T KOG0209|consen 816 TNDVGALKQAHVGVALL-NNPE 836 (1160)
T ss_pred Ccchhhhhhcccceehh-cCCh
Confidence 99999999999999997 4444
No 31
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-71 Score=602.16 Aligned_cols=628 Identities=25% Similarity=0.331 Sum_probs=472.5
Q ss_pred HHHhhcCCCcCCCCCC--ccH-HHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHH
Q 003371 138 RRSQLFGANTYHKPPP--KGL-LHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSN 214 (825)
Q Consensus 138 ~r~~~~G~N~~~~~~~--~s~-~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~ 214 (825)
.++++|-+|.+...+- -+| ...++++|+...++++++.+...++..+.-......|.. ..+.+++..+-.++.|
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~p---l~fvl~itl~keavdd 150 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGP---LGFVLTITLIKEAVDD 150 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHH---HHHHHHHHHHHHHHHH
Confidence 3566788888776542 244 345788999988888888887777665432222222222 1122233334456666
Q ss_pred HHHHHHHHHHhchhCCCeeEEE-eCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecC----cceecCCCCCCCCCee
Q 003371 215 FRQARQFDKLSKISNNIKVEVV-REARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGH----SLQVDESSMTGESDHV 289 (825)
Q Consensus 215 ~~~~~~~~~l~~~~~~~~v~V~-R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~----~l~VDES~LTGEs~pv 289 (825)
+++.+.-+. .|+...+++ |+|-... ++++|.|||+|.+..+++||||.+++..+ ++.|-+-.|+||++..
T Consensus 151 ~~r~~rd~~----~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWK 225 (1051)
T KOG0210|consen 151 LKRRRRDRE----LNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWK 225 (1051)
T ss_pred HHHHHhhhh----hhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccce
Confidence 655544433 344444444 7776555 99999999999999999999999999643 3589999999999854
Q ss_pred eecCC---------------------------------------------CCceeeeCceeeeceEEEEEEEEcccchHH
Q 003371 290 EVDST---------------------------------------------NNPFLFSGSKVADGYAQMLVVSVGMNTAWG 324 (825)
Q Consensus 290 ~k~~~---------------------------------------------~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g 324 (825)
-|-+- -.+.|+++|.|.+|.+.++|++||.+|
T Consensus 226 Lrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt--- 302 (1051)
T KOG0210|consen 226 LRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT--- 302 (1051)
T ss_pred eeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---
Confidence 33210 136799999999999999999999999
Q ss_pred HHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHH
Q 003371 325 EMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAA 404 (825)
Q Consensus 325 ~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (825)
+-+.+.+.++.+---++..+|.+.+++....+.++++... ..|.. . .+..+++.
T Consensus 303 RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~------~~g~~------~--------------~wyi~~~R 356 (1051)
T KOG0210|consen 303 RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVA------MKGFG------S--------------DWYIYIIR 356 (1051)
T ss_pred HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHH------hhcCC------C--------------chHHHHHH
Confidence 4445556677777788889999988776655554443221 12211 0 33455667
Q ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHhcc----ccccccchhhhcccCeEEEEecCcCccccCceEEEEEEecccccc
Q 003371 405 AVTIVVVAIPEGLPLAVTLTLAYSMKRMMTD----QAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIV 480 (825)
Q Consensus 405 av~ilvvavP~~Lplavtl~la~~~~~m~k~----~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~ 480 (825)
++.++...+|..|-..+.++..+-...+..| |.+||....-|.||++.++.+|||||||+|+|.+++++++.-.+.
T Consensus 357 fllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s 436 (1051)
T KOG0210|consen 357 FLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYS 436 (1051)
T ss_pred HHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeecc
Confidence 7777888899999999999999988888887 456999999999999999999999999999999999998765443
Q ss_pred ccc--------------------------cccCChHHHHHHHHHHhhcCCccccccCCCCCcceecCChhHHHHHHHHHH
Q 003371 481 QET--------------------------YCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEFSGSPTEKAVLSWAVL 534 (825)
Q Consensus 481 ~~~--------------------------~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~ 534 (825)
.+. ...++..+.+ +.+++++|++...... +++...+...+|.|.||++|..
T Consensus 437 ~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~-~V~alalCHNVTPv~e-~~ge~sYQAaSPDEVAiVkwTe- 513 (1051)
T KOG0210|consen 437 AETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRN-AVLALALCHNVTPVFE-DDGEVSYQAASPDEVAIVKWTE- 513 (1051)
T ss_pred HhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHH-HHHHHHHhccCCcccC-CCceEEeecCCCCeEEEEEeee-
Confidence 321 0112223333 3456677776554432 3334567788999999999986
Q ss_pred HcCCchH-------------HHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCCeeec
Q 003371 535 EMGMEMD-------------KVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNGVIKS 601 (825)
Q Consensus 535 ~~g~~~~-------------~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~ 601 (825)
..|+..- ....+|+|++++||+|+.||||++++.+..+++..|.|||.-.+-..-.
T Consensus 514 ~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq----------- 582 (1051)
T KOG0210|consen 514 TVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ----------- 582 (1051)
T ss_pred ecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc-----------
Confidence 6665421 2224799999999999999999999998778899999999887754321
Q ss_pred CChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccc-----------hhHH-----hhhhhccCeEEeeeecccCC
Q 003371 602 MDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNN-----------DVKA-----RQRLKEEGLTLLGIVGIKDP 665 (825)
Q Consensus 602 l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~-----------~~~~-----~~~~~e~~l~llG~v~i~Dp 665 (825)
..+.+++...+||.+||||+.+|.|.++++|.+..+ +-.+ -....|.||.++|+.|.+|.
T Consensus 583 ----~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDk 658 (1051)
T KOG0210|consen 583 ----YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDK 658 (1051)
T ss_pred ----cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHH
Confidence 235678889999999999999999999886632110 0000 12357899999999999999
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc-----------------------ccceeeechhh
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV-----------------------EKGEVVEGVEF 722 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~-----------------------~~~~vi~G~~~ 722 (825)
++++|+.+++.||+|||+|||+|||..+||..||+..++...++.. ...++|+|+.+
T Consensus 659 LQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl 738 (1051)
T KOG0210|consen 659 LQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESL 738 (1051)
T ss_pred HhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchH
Confidence 9999999999999999999999999999999999999999866542 35689999877
Q ss_pred hc---CCHHHHHhhccC--eeEEEecCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhc
Q 003371 723 RN---YTDEERIQKVDK--IRVMARSSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESS 796 (825)
Q Consensus 723 ~~---~~~~~~~~~~~~--~~V~ar~sP~dK~~lV~~Lq~~-g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aa 796 (825)
.- +-++|+.+.... ..|+|||+|.||+++++.||++ |..|+.+|||.||+.|+++||+||.+-...-..|.-||
T Consensus 739 ~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAA 818 (1051)
T KOG0210|consen 739 EFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAA 818 (1051)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhc
Confidence 63 445777776654 4699999999999999999986 99999999999999999999999954323333678899
Q ss_pred CeeeccCCchHHHHHHHH-hHHhhccc
Q 003371 797 DIVILDDDFTSVATVLSP-GDQLHSGC 822 (825)
Q Consensus 797 Divlldd~f~sIv~~i~~-gR~i~~ni 822 (825)
|+.|. .|+.+-+++.| ||+-|.+-
T Consensus 819 DfSIt--qF~Hv~rLLl~HGR~SYkrs 843 (1051)
T KOG0210|consen 819 DFSIT--QFSHVSRLLLWHGRNSYKRS 843 (1051)
T ss_pred cccHH--HHHHHHHHhhccccchHHHH
Confidence 99999 89999999866 99999763
No 32
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=6.4e-70 Score=647.28 Aligned_cols=654 Identities=24% Similarity=0.296 Sum_probs=504.3
Q ss_pred HHhhcCCCcCCCCCC--ccH-HHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHH
Q 003371 139 RSQLFGANTYHKPPP--KGL-LHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNF 215 (825)
Q Consensus 139 r~~~~G~N~~~~~~~--~s~-~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~ 215 (825)
++..|-.|.+...+- -+| .+.+|+||++..++++++.++++++. +.+.+ ++ ..++++++++.+++++|.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~----~~---~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFN----PY---TTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccC----cc---ceeeceeeeehHHHHHHH
Confidence 555788898876542 233 45699999999999999999999887 54322 22 345667778888899999
Q ss_pred HHHHHHHHHhchhCCCeeEEEeCCE-EEEEEecCcccCeEEEeCCCCeeeceEEEEecCc----ceecCCCCCCCCCeee
Q 003371 216 RQARQFDKLSKISNNIKVEVVREAR-RLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS----LQVDESSMTGESDHVE 290 (825)
Q Consensus 216 ~~~~~~~~l~~~~~~~~v~V~R~g~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~----l~VDES~LTGEs~pv~ 290 (825)
.++.+..+.+++.|+.++.|.|++. ..+..|.+|+|||+|++..++.+|||.++++++. |+|+++.|+||+....
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 8888888899899999999999644 7999999999999999999999999999997654 7999999999998766
Q ss_pred ecCC---------------------------------------------CCceeeeCceeee-ceEEEEEEEEcccchHH
Q 003371 291 VDST---------------------------------------------NNPFLFSGSKVAD-GYAQMLVVSVGMNTAWG 324 (825)
Q Consensus 291 k~~~---------------------------------------------~~~~l~sGt~v~~-G~~~~~V~~vG~~T~~g 324 (825)
|... .++.++.|+++.+ -++.+.|+.+|++|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 5420 1235778888876 46899999999999
Q ss_pred HHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHH
Q 003371 325 EMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAA 404 (825)
Q Consensus 325 ~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (825)
|+|.+...+..+++++++.+|.....+..+.++++++..+.. .++........+ ..|.... .+........|..
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~--~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~f~t 330 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGF--AIWTRQDGRHNG-EWWYLSP---SEAAYAGFVHFLT 330 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhh--heeeeecccccC-chhhhcC---chHHHHHHHHHHH
Confidence 667777778889999999999876555444333333222221 111111111111 1111111 1122244555677
Q ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHhc----------cccccccchhhhcccCeEEEEecCcCccccCceEEEEEEe
Q 003371 405 AVTIVVVAIPEGLPLAVTLTLAYSMKRMMT----------DQAMVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWL 474 (825)
Q Consensus 405 av~ilvvavP~~Lplavtl~la~~~~~m~k----------~~~lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~ 474 (825)
++.++...+|..|...+.+.-.+.+.-+.+ ..+.+|..+.-|.||++++|++|||||||+|.|.+.++.+
T Consensus 331 ~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi 410 (1151)
T KOG0206|consen 331 FIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSI 410 (1151)
T ss_pred HHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccc
Confidence 788899999999999998888776654443 3567899999999999999999999999999999999999
Q ss_pred ccccccccccc-----------------------------------cCChHHHHHHHHHHhhcCCccccccCCCCCccee
Q 003371 475 GQESIVQETYC-----------------------------------KIASSIRDLFHQGVGLNTTGSVSKLKPGSSVAEF 519 (825)
Q Consensus 475 ~~~~~~~~~~~-----------------------------------~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~~~ 519 (825)
++..|...... ...+.....+....++|++...+...+.....+.
T Consensus 411 ~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~ 490 (1151)
T KOG0206|consen 411 NGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYE 490 (1151)
T ss_pred cCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeee
Confidence 88765432100 0111223344566778887766542122245677
Q ss_pred cCChhHHHHHHHHHHHcCCchH------------HHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHH
Q 003371 520 SGSPTEKAVLSWAVLEMGMEMD------------KVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILA 587 (825)
Q Consensus 520 ~g~p~e~All~~a~~~~g~~~~------------~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~ 587 (825)
..+|.|.|++..|. ++|..+- .....|+++++.+|+|.||||||+++.++|. +++|||||+..|.+
T Consensus 491 A~SPDE~AlV~aAr-~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~-i~LycKGADsvI~e 568 (1151)
T KOG0206|consen 491 AESPDEAALVEAAR-ELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGR-ILLYCKGADSVIFE 568 (1151)
T ss_pred cCCCcHHHHHHHHH-hcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCc-EEEEEcCcchhhHh
Confidence 88999999999998 8887652 1235799999999999999999999998875 99999999999999
Q ss_pred hcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccc---------------hhHHhhhhhcc
Q 003371 588 MCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNN---------------DVKARQRLKEE 652 (825)
Q Consensus 588 ~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~---------------~~~~~~~~~e~ 652 (825)
+++. -....++...+++++||.+||||+|+|||+++++|+.... .++...+.+|+
T Consensus 569 rL~~----------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk 638 (1151)
T KOG0206|consen 569 RLSK----------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEK 638 (1151)
T ss_pred hhhh----------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHh
Confidence 9985 1235677788899999999999999999999987743221 11223456799
Q ss_pred CeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc----------------------
Q 003371 653 GLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ---------------------- 710 (825)
Q Consensus 653 ~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~---------------------- 710 (825)
||+++|..+|||++++||+++|+.|++||||+||+|||..+||.+||..|+++.++..
T Consensus 639 ~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~ 718 (1151)
T KOG0206|consen 639 DLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALK 718 (1151)
T ss_pred cchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999976322
Q ss_pred --------------------cccceeeechhhhcCCHHHHH----hh--ccCeeEEEecCHHHHHHHHHHHHh-CCCEEE
Q 003371 711 --------------------VEKGEVVEGVEFRNYTDEERI----QK--VDKIRVMARSSPFDKLLMVQCLKK-KGHVVA 763 (825)
Q Consensus 711 --------------------~~~~~vi~G~~~~~~~~~~~~----~~--~~~~~V~ar~sP~dK~~lV~~Lq~-~g~vVa 763 (825)
...+++++|+.+....+++.. +. -++..++||+||.||+.+|+..++ .+.+++
T Consensus 719 ~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TL 798 (1151)
T KOG0206|consen 719 ETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTL 798 (1151)
T ss_pred HHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEE
Confidence 036789999988866554322 22 356779999999999999999985 489999
Q ss_pred EEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHH-HHHhHHhhcccc
Q 003371 764 VTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV-LSPGDQLHSGCF 823 (825)
Q Consensus 764 ~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~-i~~gR~i~~ni~ 823 (825)
++|||.||.+|+++|||||.++..+-..|..+||+-|. .|.-+-++ +-+||+.|.|+-
T Consensus 799 AIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a 857 (1151)
T KOG0206|consen 799 AIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFLERLLLVHGHWSYIRLA 857 (1151)
T ss_pred EeeCCCccchheeeCCcCeeeccchhhhhhhcccchHH--HHHHHhhhheeecceeHHHHH
Confidence 99999999999999999996655555579999999999 79988888 489999998874
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-62 Score=518.32 Aligned_cols=492 Identities=27% Similarity=0.416 Sum_probs=387.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeC-CEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecC
Q 003371 201 VAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVRE-ARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDE 279 (825)
Q Consensus 201 ~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~-g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDE 279 (825)
+.+++..+-+++.+-+-..|...|.+.+.....+++++ |..+.|++.+|..||+|.+..||+||+||.+++|.. .|||
T Consensus 74 fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdE 152 (681)
T COG2216 74 FTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDE 152 (681)
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecch
Confidence 33444445556666676677777776666667777776 899999999999999999999999999999999987 9999
Q ss_pred CCCCCCCCeeeecCC-CCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 003371 280 SSMTGESDHVEVDST-NNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAV 358 (825)
Q Consensus 280 S~LTGEs~pv~k~~~-~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~ 358 (825)
|++||||.||.|.+. +-.-+-.||.|++.+.+..+++.-.+|.+-||+.+++.++.++||-+--|+-+ ..++.+
T Consensus 153 SAITGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iL-----L~~LTl 227 (681)
T COG2216 153 SAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTIL-----LSGLTL 227 (681)
T ss_pred hhccCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHH-----HHHHHH
Confidence 999999999999853 11348899999999999999999999999999999999999999977655543 333333
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCccccc-CCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhcccc
Q 003371 359 AFLVLVVLLARYFTGNTKGENGIKEYN-GSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQA 437 (825)
Q Consensus 359 a~l~~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~ 437 (825)
.+++.++.+..| . .|. +... .+...++++|+.+|-.+.--++-.=..+|.|+.+-|+
T Consensus 228 iFL~~~~Tl~p~--a---------~y~~g~~~-----------~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NV 285 (681)
T COG2216 228 IFLLAVATLYPF--A---------IYSGGGAA-----------SVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNV 285 (681)
T ss_pred HHHHHHHhhhhH--H---------HHcCCCCc-----------CHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhce
Confidence 333322222111 1 111 1111 1345567888999987766666555679999999999
Q ss_pred ccccchhhhcccCeEEEEecCcCccccCceEEEEEEeccccccccccccCChHHHHHHHHHHhhcCCccccccCCCCCcc
Q 003371 438 MVRKLPACETMGSATVICTDKTGTLTLNQMKVTKFWLGQESIVQETYCKIASSIRDLFHQGVGLNTTGSVSKLKPGSSVA 517 (825)
Q Consensus 438 lvr~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~n~~~~~~~~~~~~~~~ 517 (825)
+-++..|+|..|.+|++..|||||+|.|+-.-.+++....... .+ +.....+.+ +.
T Consensus 286 iA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~~-----------~~-la~aa~lsS---l~--------- 341 (681)
T COG2216 286 IATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVSE-----------EE-LADAAQLAS---LA--------- 341 (681)
T ss_pred eecCcchhhhcCCccEEEecccCceeecchhhhheecCCCCCH-----------HH-HHHHHHHhh---hc---------
Confidence 9999999999999999999999999998877777765443211 11 112222221 11
Q ss_pred eecCChhHHHHHHHHHHHcCCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccccccCC
Q 003371 518 EFSGSPTEKAVLSWAVLEMGMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHYYESNG 597 (825)
Q Consensus 518 ~~~g~p~e~All~~a~~~~g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~~~~~g 597 (825)
-..|.-+.++..|. +.+.+.+...... .....||+.+.|++++-.. ++ +-.-|||.+.+...-.. .|
T Consensus 342 --DeTpEGrSIV~LA~-~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~~--~~---~~irKGA~dai~~~v~~----~~ 408 (681)
T COG2216 342 --DETPEGRSIVELAK-KLGIELREDDLQS-HAEFVPFTAQTRMSGVDLP--GG---REIRKGAVDAIRRYVRE----RG 408 (681)
T ss_pred --cCCCCcccHHHHHH-HhccCCCcccccc-cceeeecceecccccccCC--CC---ceeecccHHHHHHHHHh----cC
Confidence 12466678888888 6665443222111 2456799999988887542 22 34579999999876541 11
Q ss_pred eeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHH
Q 003371 598 VIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEAC 677 (825)
Q Consensus 598 ~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l 677 (825)
......++...++.+..|-..++++. |-.++|++.++|-++||.+|-+.++
T Consensus 409 ------g~~p~~l~~~~~~vs~~GGTPL~V~~-----------------------~~~~~GVI~LkDivK~Gi~ERf~el 459 (681)
T COG2216 409 ------GHIPEDLDAAVDEVSRLGGTPLVVVE-----------------------NGRILGVIYLKDIVKPGIKERFAEL 459 (681)
T ss_pred ------CCCCHHHHHHHHHHHhcCCCceEEEE-----------------------CCEEEEEEEehhhcchhHHHHHHHH
Confidence 12345678888999999999999875 4469999999999999999999999
Q ss_pred HhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHh
Q 003371 678 QSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKK 757 (825)
Q Consensus 678 ~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~ 757 (825)
|+.||+.+|+||||+.||.+||+|.|+.. ..|.++|+||..+|+.-|.
T Consensus 460 R~MgIkTvM~TGDN~~TAa~IA~EAGVDd--------------------------------fiAeatPEdK~~~I~~eQ~ 507 (681)
T COG2216 460 RKMGIKTVMITGDNPLTAAAIAAEAGVDD--------------------------------FIAEATPEDKLALIRQEQA 507 (681)
T ss_pred HhcCCeEEEEeCCCHHHHHHHHHHhCchh--------------------------------hhhcCChHHHHHHHHHHHh
Confidence 99999999999999999999999999976 5899999999999999999
Q ss_pred CCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhh
Q 003371 758 KGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLH 819 (825)
Q Consensus 758 ~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~ 819 (825)
+|+.|||||||+||||||.+||||+||. +||.+|||++.+|=+|.|...+.+++..|+...
T Consensus 508 ~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 508 EGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred cCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 9999999999999999999999999999 999999999999999999999999999998754
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=2.2e-35 Score=308.17 Aligned_cols=226 Identities=31% Similarity=0.562 Sum_probs=192.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceec
Q 003371 199 IFVAVFLVIVVSAFSNFRQARQFDKLSKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVD 278 (825)
Q Consensus 199 i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VD 278 (825)
+++.+++..++..+.+++.+++.+++++...+..++|+|||+++++++.||+|||||.|++||++||||++++...+.||
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd 81 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVD 81 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccc
Confidence 45566677788888999999999998776555559999999999999999999999999999999999999993345999
Q ss_pred CCCCCCCCCeeeec---CCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHH
Q 003371 279 ESSMTGESDHVEVD---STNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVG 355 (825)
Q Consensus 279 ES~LTGEs~pv~k~---~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~ 355 (825)
||.+|||+.|+.|. ...++++|+||.+.+|++.++|++||.+|..|++.+.......+++++++.+++++.++.++.
T Consensus 82 ~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (230)
T PF00122_consen 82 ESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIII 161 (230)
T ss_dssp CHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcc
Confidence 99999999999997 236899999999999999999999999999999999998888888999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhcc
Q 003371 356 LAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTD 435 (825)
Q Consensus 356 l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~ 435 (825)
++++++++++++.. .. .. .+...+..++++++++||++||+++++++.+++++|.++
T Consensus 162 ~~~~~~~~~~~~~~---~~------~~--------------~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~ 218 (230)
T PF00122_consen 162 LAIAILVFIIWFFN---DS------GI--------------SFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKN 218 (230)
T ss_dssp HHHHHHHHHHCHTG---ST------TC--------------HCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHT
T ss_pred cccchhhhccceec---cc------cc--------------ccccccccccceeeeecccceeehHHHHHHHHHHHHHHC
Confidence 77777666543221 00 01 445678888999999999999999999999999999999
Q ss_pred ccccccchhhhc
Q 003371 436 QAMVRKLPACET 447 (825)
Q Consensus 436 ~~lvr~l~a~E~ 447 (825)
|+++|+++++|+
T Consensus 219 ~i~v~~~~a~E~ 230 (230)
T PF00122_consen 219 GIIVKNLSALEA 230 (230)
T ss_dssp TEEESSTTHHHH
T ss_pred CEEEeCcccccC
Confidence 999999999996
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.92 E-value=1.3e-24 Score=223.90 Aligned_cols=97 Identities=45% Similarity=0.714 Sum_probs=91.5
Q ss_pred CeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHh
Q 003371 653 GLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQ 732 (825)
Q Consensus 653 ~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~ 732 (825)
++.++|.+.+.||+||+++++|+.|+++|++++|+|||+..+|.++|+++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 578999999999999999999999999999999999999999999999999943
Q ss_pred hccCeeEEEec--CHHHH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCC
Q 003371 733 KVDKIRVMARS--SPFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEAD 779 (825)
Q Consensus 733 ~~~~~~V~ar~--sP~dK--~~lV~~Lq~~g~vVa~~GDG~NDapALk~Ad 779 (825)
..|+|+. +|++| ..+++.|+..++.|+|+|||.||++||++||
T Consensus 169 ----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 169 ----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ----ccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 2389999 99999 9999999977779999999999999999997
No 36
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.57 E-value=8.4e-15 Score=129.07 Aligned_cols=72 Identities=40% Similarity=0.725 Sum_probs=64.1
Q ss_pred eecCChhHHHHHHHHHHHc--CCchHHHhhcceEEEEecCCCCCceeEEEEEecCCCeEEEEEcCcHHHHHHhcccc
Q 003371 518 EFSGSPTEKAVLSWAVLEM--GMEMDKVKQKYSILHVETFNSEKKRSGVLIRRKADNTTHIHWKGAAEIILAMCSHY 592 (825)
Q Consensus 518 ~~~g~p~e~All~~a~~~~--g~~~~~~~~~~~i~~~~~F~s~~krmsvvv~~~~~~~~~~~~KGa~e~il~~c~~~ 592 (825)
+..|+|+|.||+.|+. ++ +.+....+..+++++.+||||++|||+|+++ +++.+.+|+|||||.||++|+++
T Consensus 18 ~~~G~ptE~ALl~~~~-~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~--~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 18 EIIGDPTEKALLRFAK-KLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR--NDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred cccCCcCHHHHHHHHH-HcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe--CCCEEEEEcCCChHHHHHhcCCC
Confidence 4899999999999998 78 4567889999999999999999999999998 33357779999999999999864
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.55 E-value=2.6e-14 Score=128.27 Aligned_cols=125 Identities=26% Similarity=0.322 Sum_probs=107.1
Q ss_pred EEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhc
Q 003371 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKV 734 (825)
Q Consensus 655 ~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~ 734 (825)
...+.+.---.+=++++++|++|++. ++|++.|||..-+....|+-.||...
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 34566666677789999999999999 99999999999999999999998653
Q ss_pred cCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC--CchHHHHHhcCeeeccCCchHHHHHH
Q 003371 735 DKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI--QGTEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 735 ~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~--~gt~vAk~aaDivlldd~f~sIv~~i 812 (825)
+|||...|+.|..+++.|++.++.|.|+|||.||.+||++||+||..=. ...+-+.++||+++- |...++.+.
T Consensus 72 ---rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl~ 146 (152)
T COG4087 72 ---RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDLL 146 (152)
T ss_pred ---eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHHh
Confidence 4899999999999999999999999999999999999999999986522 234456799999988 566666554
No 38
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.23 E-value=1.7e-11 Score=102.38 Aligned_cols=66 Identities=33% Similarity=0.549 Sum_probs=62.3
Q ss_pred CCHHHHHHHhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHH
Q 003371 112 GGVEGVANALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALS 179 (825)
Q Consensus 112 ggv~~l~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~ls 179 (825)
.+++++++.|+|+...||++++ +.+|+++||+|.+++++++++|+.++++|.++++++|++++++|
T Consensus 4 ~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 4 LSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp SSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 3789999999999999998855 99999999999999999999999999999999999999999987
No 39
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.13 E-value=7.7e-11 Score=96.85 Aligned_cols=62 Identities=32% Similarity=0.478 Sum_probs=57.2
Q ss_pred HhCCCCCCCCCCCHHHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhc
Q 003371 120 ALGTNPEYGINGNDEDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFG 183 (825)
Q Consensus 120 ~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g 183 (825)
.|+++...||+.++ +.+|+++||.|++++++++++|+.++++|.++++++|++++++|+++|
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 47888888998865 999999999999999988999999999999999999999999998775
No 40
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.13 E-value=2.5e-08 Score=111.19 Aligned_cols=203 Identities=18% Similarity=0.323 Sum_probs=143.1
Q ss_pred CcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchh-----------------hc----
Q 003371 580 GAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEE-----------------TA---- 638 (825)
Q Consensus 580 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e-----------------~~---- 638 (825)
|-.+.+...|+.++| ...+.||+...|+++++....-...| .|++||||+....- ..
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 778899999999998 34678999999999988887766666 69999999753110 00
Q ss_pred ------ccchhHHh------------------hhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHH
Q 003371 639 ------YNNDVKAR------------------QRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFT 694 (825)
Q Consensus 639 ------~~~~~~~~------------------~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~t 694 (825)
.+-..+.. -...-.+.+|.|+|....+.|++....|+.|-++-|+.+..+-.+...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00000000 011235678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccccccc---------------------------------------ccceeeech-------hhhcCCHH
Q 003371 695 AKAIATECGILRLDQQV---------------------------------------EKGEVVEGV-------EFRNYTDE 728 (825)
Q Consensus 695 A~aIA~~~GI~~~~~~~---------------------------------------~~~~vi~G~-------~~~~~~~~ 728 (825)
.+-.|+++||-...... ..+..+.-+ .|+.++..
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999997532210 000111111 11111110
Q ss_pred --HH-----Hhh-----------------cc-CeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccC--HHHhhhCCcc
Q 003371 729 --ER-----IQK-----------------VD-KIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTND--APALKEADVG 781 (825)
Q Consensus 729 --~~-----~~~-----------------~~-~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~ND--apALk~AdVG 781 (825)
.+ ..+ +| -+-.|..++|+.--++++.+|+.|++|+++|...|- .-..-+|||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadIS 1015 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADIS 1015 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcccee
Confidence 00 000 11 123789999999999999999999999999998884 3356789999
Q ss_pred Eec
Q 003371 782 LSM 784 (825)
Q Consensus 782 iam 784 (825)
|++
T Consensus 1016 ial 1018 (1354)
T KOG4383|consen 1016 IAL 1018 (1354)
T ss_pred EEe
Confidence 987
No 41
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.00 E-value=2.2e-09 Score=109.49 Aligned_cols=130 Identities=13% Similarity=0.059 Sum_probs=97.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeec-hhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEG-VEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G-~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
+++|++++.|+.+++.| ++.++||-....+..+++++||..-.. ..+.+++ ..+ +. . .. .
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~a---n~l~~~~~g~~---tG--------~--~~--~ 128 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLC---HKLEIDDSDRV---VG--------Y--QL--R 128 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhc---eeeEEecCCee---EC--------e--ee--c
Confidence 67999999999999975 999999999999999999999964211 0111111 000 00 0 11 3
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHh
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~g 815 (825)
.|.+|...++.+++.|..+.++|||.||.||++.|++|+++. +.+..+++||=.=.--+.+.+..++.+.
T Consensus 129 ~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 129 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 577999999999988878899999999999999999999996 5666666665444445677777777664
No 42
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.93 E-value=4.5e-09 Score=108.77 Aligned_cols=129 Identities=22% Similarity=0.304 Sum_probs=94.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe-c
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR-S 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar-~ 743 (825)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..-... ....++..+.. .+.+. .
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~---~~~~~~~~~~~-------------~~~~~~~ 148 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFAN---RLEVEDGKLTG-------------LVEGPIV 148 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEee---EEEEECCEEEE-------------EecCccc
Confidence 5899999999999999999999999999999999999998642100 00000000000 01111 1
Q ss_pred CHHHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 744 SPFDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
.+..|..+++.+.++ | +.+.++||+.||.+|++.|+++++++ +.+..+++||.+|.++||..+..+
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 149 DASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred CCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 123466677665544 2 34778999999999999999999985 678899999999999999988754
No 43
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.91 E-value=5.9e-09 Score=107.69 Aligned_cols=146 Identities=21% Similarity=0.256 Sum_probs=99.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechh--hhc------CC----------
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE--FRN------YT---------- 726 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~--~~~------~~---------- 726 (825)
.+.|++.++|++|++.|+++.++||.+...+..+++++++..+....+++.+....+ +.. +.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488999999999999999999999999999999999999864321111222221100 000 00
Q ss_pred --------------------HHHHHhhcc--CeeEE-----Ee--cCHHHHHHHHHHHHhC-C---CEEEEEcCCccCHH
Q 003371 727 --------------------DEERIQKVD--KIRVM-----AR--SSPFDKLLMVQCLKKK-G---HVVAVTGDGTNDAP 773 (825)
Q Consensus 727 --------------------~~~~~~~~~--~~~V~-----ar--~sP~dK~~lV~~Lq~~-g---~vVa~~GDG~NDap 773 (825)
.+.+.+.+. .+.+. .. ....+|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 001111111 11111 11 2234788878777654 2 35899999999999
Q ss_pred HhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 774 ALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 774 ALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
|++.|++|+||+ ++.+.+|+.||+|..+++=..|.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 8999999999999987666666544
No 44
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.89 E-value=7.9e-09 Score=112.52 Aligned_cols=131 Identities=21% Similarity=0.320 Sum_probs=99.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe-c
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR-S 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar-~ 743 (825)
|+.||+++.++.|+++|+++.++||.....+..+.+++|+..-... .-.+.+|..-. .+... +
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an--~lei~dg~ltg--------------~v~g~iv 244 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVAN--ELEIMDGKLTG--------------NVLGDIV 244 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEe--EEEEECCEEEe--------------EecCccC
Confidence 5789999999999999999999999998889999999998531100 00011111000 01100 1
Q ss_pred CHHHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 744 SPFDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
....|...++.+.++ | +.+.++|||.||.+|++.|++|+|| ++.+..|+.||.++-..++..+..++-
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 236788888887654 3 5688999999999999999999999 678889999999999999999987764
No 45
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.86 E-value=2.4e-08 Score=106.50 Aligned_cols=149 Identities=27% Similarity=0.269 Sum_probs=107.4
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccce------------------------------
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGE------------------------------ 715 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~------------------------------ 715 (825)
+.+.++++|+++++.|++|.++||.....++.+.+++|+..+-...+++.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 89999999999999999999999999999999999999974211100000
Q ss_pred ---eeech---------------------------hhhcCC----------H---HHH----Hhhcc-CeeEEEecCH--
Q 003371 716 ---VVEGV---------------------------EFRNYT----------D---EER----IQKVD-KIRVMARSSP-- 745 (825)
Q Consensus 716 ---vi~G~---------------------------~~~~~~----------~---~~~----~~~~~-~~~V~ar~sP-- 745 (825)
..... ++.... . ++. .+.++ ...++.++.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 00000 000000 0 111 11111 2234444444
Q ss_pred -------HHHHHHHHHHHhC-CC---EEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 746 -------FDKLLMVQCLKKK-GH---VVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 746 -------~dK~~lV~~Lq~~-g~---vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
.+|..-++.|.+. |- -|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++....+-..|..++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 2788888888773 43 3999999999999999999999999 7899999999988899999999999875
Q ss_pred h
Q 003371 815 G 815 (825)
Q Consensus 815 g 815 (825)
-
T Consensus 260 ~ 260 (264)
T COG0561 260 L 260 (264)
T ss_pred H
Confidence 3
No 46
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.82 E-value=2.9e-08 Score=106.24 Aligned_cols=66 Identities=29% Similarity=0.353 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
.|..-++.|.+. | +.|+++|||.||.+||+.|++|+||| ++.+.+|+.||+|..+++=..|..+++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 455555555443 2 45899999999999999999999999 899999999999998888888888875
No 47
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.81 E-value=3.7e-08 Score=102.71 Aligned_cols=147 Identities=20% Similarity=0.193 Sum_probs=102.0
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeee---chhhh-------------------
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVE---GVEFR------------------- 723 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~---G~~~~------------------- 723 (825)
+.|.+.++|+++++.|+++.++||.....+..+++++|+..+-...+++.+.. ++.+.
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 78999999999999999999999999999999999999853211111222211 11000
Q ss_pred ----------------------cCCHHHHHhhcc----CeeE-----EEecCHH--HHHHHHHHHHhC----CCEEEEEc
Q 003371 724 ----------------------NYTDEERIQKVD----KIRV-----MARSSPF--DKLLMVQCLKKK----GHVVAVTG 766 (825)
Q Consensus 724 ----------------------~~~~~~~~~~~~----~~~V-----~ar~sP~--dK~~lV~~Lq~~----g~vVa~~G 766 (825)
....++..+.+. ...+ +....|. .|..-++.+.+. ...++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 000011111111 1111 1223333 377777777654 24589999
Q ss_pred CCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 767 DGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 767 DG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+.||.+|++.|++|+||| ++.+.+|+.||+|..+++=.++.++++
T Consensus 181 D~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999 899999999999998888888888875
No 48
>PRK10976 putative hydrolase; Provisional
Probab=98.79 E-value=6.1e-08 Score=103.52 Aligned_cols=66 Identities=30% Similarity=0.304 Sum_probs=53.4
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcC--eeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD--IVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaD--ivlldd~f~sIv~~i~ 813 (825)
.|..-++.|.+. | +-|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| .|..+++=.++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 355555555443 2 45899999999999999999999999 89999999988 6777777788888875
No 49
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.78 E-value=4.8e-08 Score=104.69 Aligned_cols=66 Identities=23% Similarity=0.233 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCe--eeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDI--VILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDi--vlldd~f~sIv~~i~ 813 (825)
.|..-++.|.+. | ..|+++|||.||.+||+.|+.|+||| ++.+.+|++||. |..+++-.+|..+|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 466666666554 2 45899999999999999999999999 899999999996 666778888888885
No 50
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.73 E-value=6.5e-08 Score=101.57 Aligned_cols=148 Identities=21% Similarity=0.206 Sum_probs=101.8
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccccccee---------------------------
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEV--------------------------- 716 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~v--------------------------- 716 (825)
..+-|.+.+++++++++|+++.+.||.....+..+..++++..+....+++.+
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 45779999999999999999999999999999999999998632111111111
Q ss_pred --------------eech---hhh------c-----------------------CCH-------HHHHhhccCeeEEEec
Q 003371 717 --------------VEGV---EFR------N-----------------------YTD-------EERIQKVDKIRVMARS 743 (825)
Q Consensus 717 --------------i~G~---~~~------~-----------------------~~~-------~~~~~~~~~~~V~ar~ 743 (825)
.... ... . ... +++.+.++....+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 0000 000 0 000 1122222221122222
Q ss_pred -------C--HHHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHH
Q 003371 744 -------S--PFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 744 -------s--P~dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~ 810 (825)
+ ..+|..-++.|.+. .+.++++||+.||.+||+.|+.|+||+ ++++..|+.||.+..+.|=..|.+
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHHH
Confidence 2 24788888888753 357889999999999999999999999 899999999999998776688877
Q ss_pred HH
Q 003371 811 VL 812 (825)
Q Consensus 811 ~i 812 (825)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 64
No 51
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.72 E-value=6e-08 Score=95.63 Aligned_cols=100 Identities=19% Similarity=0.218 Sum_probs=80.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe--cCHHHHH
Q 003371 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR--SSPFDKL 749 (825)
Q Consensus 672 ~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar--~sP~dK~ 749 (825)
.+|+.|+++|+++.++|+.+...+..+.+.+|+... |.. -.|+--.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~--------------------------------f~~~kpkp~~~~ 88 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF--------------------------------HEGIKKKTEPYA 88 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE--------------------------------EecCCCCHHHHH
Confidence 689999999999999999999999999999999641 211 2344444
Q ss_pred HHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCC
Q 003371 750 LMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD 804 (825)
Q Consensus 750 ~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~ 804 (825)
.+++.+.-....++++||+.||.+|++.|++++||+ ++.+.+|+.|+.|..+.+
T Consensus 89 ~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 89 QMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCC
Confidence 444444333456999999999999999999999999 899999999999986443
No 52
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.69 E-value=1.1e-07 Score=98.72 Aligned_cols=148 Identities=21% Similarity=0.254 Sum_probs=99.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechh----hh-cCC-------------
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE----FR-NYT------------- 726 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~----~~-~~~------------- 726 (825)
.+.+.++++|+++++.|+.+.++||.+...+..+++++|+..+....++..+..... +. .+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477899999999999999999999999999999999999543211111111111000 00 000
Q ss_pred -----------------------HHHHHhhccC----eeE-----EEecCH--HHHHHHHHHHHhC-C---CEEEEEcCC
Q 003371 727 -----------------------DEERIQKVDK----IRV-----MARSSP--FDKLLMVQCLKKK-G---HVVAVTGDG 768 (825)
Q Consensus 727 -----------------------~~~~~~~~~~----~~V-----~ar~sP--~dK~~lV~~Lq~~-g---~vVa~~GDG 768 (825)
.+........ ..+ +....| .+|..-++.+.++ | +.|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0111111111 111 112222 3687777777654 3 468999999
Q ss_pred ccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchH----HHHHHH
Q 003371 769 TNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTS----VATVLS 813 (825)
Q Consensus 769 ~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~s----Iv~~i~ 813 (825)
.||.+||+.|++|+||| ++.+.+|+.||.|..+++-.. |..+++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 899999999999988777777 666654
No 53
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.67 E-value=1.5e-07 Score=96.47 Aligned_cols=117 Identities=24% Similarity=0.327 Sum_probs=87.8
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc---ccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV---EKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~---~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+...-... ..+ +++|. |.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG-~ltG~------------------v~ 136 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDG-KLTGR------------------VV 136 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCC-EEece------------------ee
Confidence 789999999999999999999999999999999999999997532210 011 23333 44
Q ss_pred Eec-CHHHHHHHHHHHHh-CCC---EEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeec
Q 003371 741 ARS-SPFDKLLMVQCLKK-KGH---VVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVIL 801 (825)
Q Consensus 741 ar~-sP~dK~~lV~~Lq~-~g~---vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivll 801 (825)
... ..+.|...++.+.+ .|. .+.++|||.||.|||+.|+.+++.+ +....+..|+..+-
T Consensus 137 g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 137 GPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 443 34788888866655 354 4888999999999999999999996 34444555555443
No 54
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.64 E-value=1.7e-07 Score=91.50 Aligned_cols=106 Identities=19% Similarity=0.275 Sum_probs=82.8
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHH
Q 003371 673 AVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMV 752 (825)
Q Consensus 673 aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV 752 (825)
+|+.|++.|+++.++||+....+..+.++.|+... +... ..|...+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------------------------------~~~~--~~k~~~~ 81 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------------------------------YQGQ--SNKLIAF 81 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE--------------------------------Eecc--cchHHHH
Confidence 99999999999999999999999999999998641 1111 2344444
Q ss_pred HHHHh----CCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCC----chHHHHHHH
Q 003371 753 QCLKK----KGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDD----FTSVATVLS 813 (825)
Q Consensus 753 ~~Lq~----~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~----f~sIv~~i~ 813 (825)
+.+.+ ..+.+.|+||+.||.+|++.|+++++|. .+.+..+..||.++..+. |.-+...+.
T Consensus 82 ~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~ 149 (154)
T TIGR01670 82 SDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCELLL 149 (154)
T ss_pred HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHHHHH
Confidence 44432 2357999999999999999999999998 778889999999997443 555555443
No 55
>PLN02887 hydrolase family protein
Probab=98.60 E-value=3e-07 Score=107.22 Aligned_cols=52 Identities=29% Similarity=0.495 Sum_probs=48.7
Q ss_pred EEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 761 VVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 761 vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
-|+++|||.||.+||+.|+.|+||| +|.+.+|+.||+|..+++=.+|..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4889999999999999999999999 899999999999998888888988886
No 56
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.60 E-value=4.5e-07 Score=97.06 Aligned_cols=66 Identities=29% Similarity=0.398 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
+|..-++.+.++ | +-|+++||+.||.+|++.|++|+||| ++.+..|+.||.|..+++=.+|..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 355555554433 3 35889999999999999999999999 788888999999998888888988885
No 57
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.54 E-value=5.1e-07 Score=95.85 Aligned_cols=64 Identities=31% Similarity=0.328 Sum_probs=53.8
Q ss_pred HHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 747 DKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 747 dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
.|..-++.+.+. .+.++++||+.||.+||+.|+.|+||| ++.+.+|+.||++..+++-..|..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 577777777654 246899999999999999999999999 8899999999999988777766654
No 58
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.50 E-value=7.3e-07 Score=91.20 Aligned_cols=127 Identities=19% Similarity=0.208 Sum_probs=92.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEE--e
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA--R 742 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a--r 742 (825)
++.||+++.++.|+++ +++.++|+-....+..+.+++||..... ......+.. .+.. -
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~---~~~~~~~~~----------------~i~~~~~ 127 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFC---HSLEVDEDG----------------MITGYDL 127 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhc---ceEEECCCC----------------eEECccc
Confidence 4689999999999999 9999999999999999999999853110 000110000 0000 1
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 743 SSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 743 ~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
..|..|...++.++..+..+.|+|||.||.+|.+.|++|+..+ .+.++....++..+. +++..+...+.
T Consensus 128 ~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~-~~~~el~~~l~ 196 (205)
T PRK13582 128 RQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV-HTYDELLAAID 196 (205)
T ss_pred cccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc-CCHHHHHHHHH
Confidence 2477888889999888889999999999999999999999987 344444455666332 36777766653
No 59
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.50 E-value=4.9e-07 Score=90.90 Aligned_cols=111 Identities=20% Similarity=0.259 Sum_probs=85.9
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHH
Q 003371 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLM 751 (825)
Q Consensus 672 ~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~l 751 (825)
.+|+.|+++|+++.++||.....+..+++++|+.. +|. ...+|...
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------~f~--g~~~k~~~ 100 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------LYQ--GQSNKLIA 100 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce--------------------------------eec--CCCcHHHH
Confidence 69999999999999999999999999999999854 122 12345555
Q ss_pred HHHHH-hCC---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeecc----CCchHHHHHHHHhHH
Q 003371 752 VQCLK-KKG---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILD----DDFTSVATVLSPGDQ 817 (825)
Q Consensus 752 V~~Lq-~~g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlld----d~f~sIv~~i~~gR~ 817 (825)
++.+. +.| ..|+|+||+.||.+|++.|+++++++ .+.+..+..||+++-. ..+..+.+.+...|-
T Consensus 101 l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 101 FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcC
Confidence 55443 333 46999999999999999999999998 7888899999999863 234556666654443
No 60
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.48 E-value=5.2e-07 Score=91.78 Aligned_cols=117 Identities=20% Similarity=0.177 Sum_probs=82.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..-. ...+...+-.... +. .+-...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~-----~~~~~~~~~g~~~--------p~--~~~~~~ 144 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVY-----SNELVFDEKGFIQ--------PD--GIVRVT 144 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEE-----EEEEEEcCCCeEe--------cc--eeeEEc
Confidence 68999999999999999999999999999999999999975310 0111110000000 11 112234
Q ss_pred HHHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcC
Q 003371 745 PFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD 797 (825)
Q Consensus 745 P~dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaD 797 (825)
|..|...++.+.++ .+.+.++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 145 ~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 145 FDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred cccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 56687777766543 235899999999999999999999998 44555666665
No 61
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.47 E-value=1.9e-06 Score=91.51 Aligned_cols=147 Identities=16% Similarity=0.084 Sum_probs=93.7
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechh--------h--hcCCHHH------
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE--------F--RNYTDEE------ 729 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~--------~--~~~~~~~------ 729 (825)
.-+.++++|+.++++|+++.++||.....+..+.+++|+.......+++.+..... + ..++.+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44568999999999999999999999999999999999853211112222222110 0 0011000
Q ss_pred -----------------------------------------------------HHhhccC--eeE-----EEecC--HHH
Q 003371 730 -----------------------------------------------------RIQKVDK--IRV-----MARSS--PFD 747 (825)
Q Consensus 730 -----------------------------------------------------~~~~~~~--~~V-----~ar~s--P~d 747 (825)
+.+.+.+ +.+ +-... -..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0000000 110 00011 124
Q ss_pred HHHHHHHHHhC------CCEEEEEcCCccCHHHhhhCCccEecCCCch---HHHHHh--c-CeeeccCCchHHHHHHH
Q 003371 748 KLLMVQCLKKK------GHVVAVTGDGTNDAPALKEADVGLSMGIQGT---EVAKES--S-DIVILDDDFTSVATVLS 813 (825)
Q Consensus 748 K~~lV~~Lq~~------g~vVa~~GDG~NDapALk~AdVGiamg~~gt---~vAk~a--a-Divlldd~f~sIv~~i~ 813 (825)
|..-++.|.+. .+.|.++||+.||.+||+.|++|+||| ++. +..|+. | ++|-.+++=..|..+++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 55555555433 345999999999999999999999999 676 467876 4 57777888888888875
No 62
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.35 E-value=2.6e-06 Score=87.87 Aligned_cols=139 Identities=15% Similarity=0.032 Sum_probs=91.0
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE--E
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM--A 741 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~--a 741 (825)
-+++||+++.++.|++.|+++.++||.....+..+.+.++..... ......++|..+.... |.-..+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i--~~n~~~~~~~~~~~~~--------p~~~~~~~~ 138 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRI--YCNEADFSNEYIHIDW--------PHPCDGTCQ 138 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccE--EeceeEeeCCeeEEeC--------CCCCccccc
Confidence 578999999999999999999999999999999999887543210 0011233333222110 100010 0
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 742 RSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
......|..+++.++...+.+.|+|||.||.+|++.||+.+|=+ .-.+-.++.---...=++|..|...++
T Consensus 139 ~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 139 NQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred cCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 11135799999999887788899999999999999999988754 211212211111222257888887774
No 63
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.27 E-value=1.1e-05 Score=86.44 Aligned_cols=148 Identities=11% Similarity=0.019 Sum_probs=92.0
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc-cccccccceeeechh--------h-h-cCCHHH-----
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR-LDQQVEKGEVVEGVE--------F-R-NYTDEE----- 729 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~-~~~~~~~~~vi~G~~--------~-~-~~~~~~----- 729 (825)
+-+.++++|++|+++|+++++.||.....+..+++++|+.. +-...+++.+..... . . .++.+.
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45779999999999999999999999999999999999842 111112222221100 0 0 011100
Q ss_pred --------------------------------------------------------HHhhcc--CeeE-----EEecCH-
Q 003371 730 --------------------------------------------------------RIQKVD--KIRV-----MARSSP- 745 (825)
Q Consensus 730 --------------------------------------------------------~~~~~~--~~~V-----~ar~sP- 745 (825)
+.+.+. .+.+ +-...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 000000 0111 011122
Q ss_pred -HHHHHHHHHHHh-------CCCEEEEEcCCccCHHHhhhCCccEecCCCchH---H--HHHhcCeeeccCCchHHHHHH
Q 003371 746 -FDKLLMVQCLKK-------KGHVVAVTGDGTNDAPALKEADVGLSMGIQGTE---V--AKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 746 -~dK~~lV~~Lq~-------~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~---v--Ak~aaDivlldd~f~sIv~~i 812 (825)
-+|..-++.|.+ ....|+++|||.||.+||+.|++|+|||....+ + .+..+|++.-...-..+..++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 245555555543 235689999999999999999999999943312 1 344788888877777888877
Q ss_pred H
Q 003371 813 S 813 (825)
Q Consensus 813 ~ 813 (825)
+
T Consensus 265 ~ 265 (271)
T PRK03669 265 D 265 (271)
T ss_pred H
Confidence 5
No 64
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.26 E-value=2.4e-06 Score=86.13 Aligned_cols=92 Identities=21% Similarity=0.260 Sum_probs=70.4
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHH-
Q 003371 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF- 746 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~- 746 (825)
|++++.|+.++++|++++++||+....+.++|+.+|+..... .-+.. +.+ ......+|.+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v------~~~~~-~~~----------~~~~~~~~~~~~~ 154 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNV------IGNEL-FDN----------GGGIFTGRITGSN 154 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGE------EEEEE-ECT----------TCCEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEE------EEEee-eec----------ccceeeeeECCCC
Confidence 888899999999999999999999999999999999975311 00000 100 012245566555
Q ss_pred H--HHHHHHHH------HhCCCEEEEEcCCccCHHHhh
Q 003371 747 D--KLLMVQCL------KKKGHVVAVTGDGTNDAPALK 776 (825)
Q Consensus 747 d--K~~lV~~L------q~~g~vVa~~GDG~NDapALk 776 (825)
+ |...++.+ +.....+.++|||.||.||||
T Consensus 155 ~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 155 CGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp ESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 3 99999999 345789999999999999996
No 65
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.25 E-value=1e-05 Score=86.77 Aligned_cols=149 Identities=16% Similarity=0.094 Sum_probs=95.8
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechh----------------hh--cC
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVE----------------FR--NY 725 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~----------------~~--~~ 725 (825)
..+.++++++|+.|++.|+++.++||.....+..+++++|+..+....++..+..... +. .+
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 4567889999999999999999999999999999999999864322222232321100 00 00
Q ss_pred CHHHH-------------------------------------Hh----hccC----------------------eeE---
Q 003371 726 TDEER-------------------------------------IQ----KVDK----------------------IRV--- 739 (825)
Q Consensus 726 ~~~~~-------------------------------------~~----~~~~----------------------~~V--- 739 (825)
+.+.. .. .+.. +.+
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 179 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRG 179 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEEC
Confidence 00000 00 0000 000
Q ss_pred --EEecC-HHHHHHHHHHHHhC----C-CEEEEEcCCccCHHHhhhCCccEecCCCchHHHH----Hhc-Ceee--ccCC
Q 003371 740 --MARSS-PFDKLLMVQCLKKK----G-HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAK----ESS-DIVI--LDDD 804 (825)
Q Consensus 740 --~ar~s-P~dK~~lV~~Lq~~----g-~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk----~aa-Divl--ldd~ 804 (825)
+-... +.+|..-++.|.+. . +.|+++||+.||.+|++.|++|++|+ +|.+..| .+| +.|. ...+
T Consensus 180 ~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~ 258 (273)
T PRK00192 180 GRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPG 258 (273)
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCC
Confidence 00111 11565556555532 4 78999999999999999999999999 8999889 666 6776 3445
Q ss_pred chHHHHHHH
Q 003371 805 FTSVATVLS 813 (825)
Q Consensus 805 f~sIv~~i~ 813 (825)
=..+..+++
T Consensus 259 ~~Gv~~~l~ 267 (273)
T PRK00192 259 PEGWAEAIN 267 (273)
T ss_pred cHHHHHHHH
Confidence 667777764
No 66
>PLN02954 phosphoserine phosphatase
Probab=98.19 E-value=1.3e-05 Score=83.14 Aligned_cols=128 Identities=24% Similarity=0.315 Sum_probs=84.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccccccee------eechhhhcCCHHHHHhhccCee
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEV------VEGVEFRNYTDEERIQKVDKIR 738 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~v------i~G~~~~~~~~~~~~~~~~~~~ 738 (825)
+++||+++.++.|++.|+++.++||.....+..+++.+|+...... ...+. +.|.....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~-~~~~~~~~~g~~~g~~~~~-------------- 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIF-ANQILFGDSGEYAGFDENE-------------- 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEE-EeEEEEcCCCcEECccCCC--------------
Confidence 4789999999999999999999999999999999999999631100 00000 11110000
Q ss_pred EEEecCHHHHHHHHHHHHhC-C-CEEEEEcCCccCHHHhhh--CCccEecCCCc-hHHHHHhcCeeeccCCchHHHHH
Q 003371 739 VMARSSPFDKLLMVQCLKKK-G-HVVAVTGDGTNDAPALKE--ADVGLSMGIQG-TEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~-g-~vVa~~GDG~NDapALk~--AdVGiamg~~g-t~vAk~aaDivlldd~f~sIv~~ 811 (825)
.. ..+..|...++.+.++ | +.+.|+||+.||..|.+. ++++++.|... .+.....+|.++- ++..+...
T Consensus 149 ~~--~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 149 PT--SRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred cc--cCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 00 1123476777766654 2 568899999999999888 57777666322 2334456899885 67666554
No 67
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.14 E-value=3.7e-06 Score=81.60 Aligned_cols=110 Identities=20% Similarity=0.282 Sum_probs=77.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
.+-||+++.++.|++.|.+|.++||--..-+..+|.++||...+..- ..+.-...-++.. ++...-.+|
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yA---N~l~fd~~Gk~~g------fd~~~ptsd-- 156 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYA---NELLFDKDGKYLG------FDTNEPTSD-- 156 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhh---heeeeccCCcccc------cccCCcccc--
Confidence 35699999999999999999999999999999999999998643321 1110000000000 000001122
Q ss_pred HHHHHHHHHHHHhC--CCEEEEEcCCccCHHHhhhCCccEecC
Q 003371 745 PFDKLLMVQCLKKK--GHVVAVTGDGTNDAPALKEADVGLSMG 785 (825)
Q Consensus 745 P~dK~~lV~~Lq~~--g~vVa~~GDG~NDapALk~AdVGiamg 785 (825)
..-|...++.|++. -..++|+|||.||.+|+..||-=|+.|
T Consensus 157 sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 24789999999885 467899999999999999988777665
No 68
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.10 E-value=9.9e-06 Score=81.33 Aligned_cols=113 Identities=17% Similarity=0.174 Sum_probs=77.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccC-eeEEEe
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDK-IRVMAR 742 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~-~~V~ar 742 (825)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++..+..-+ . +.+....+. ..++..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~~-~-~g~~~~~~~~~~~~~~ 143 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF-----IEIYSNPASFD-N-DGRHIVWPHHCHGCCS 143 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe-----eEEeccCceEC-C-CCcEEEecCCCCccCc
Confidence 478999999999999999999999999999999999999986421 11221111000 0 000000000 001111
Q ss_pred -cCHHHHHHHHHHHHhC-CCEEEEEcCCccCHHHhhhCCccEe
Q 003371 743 -SSPFDKLLMVQCLKKK-GHVVAVTGDGTNDAPALKEADVGLS 783 (825)
Q Consensus 743 -~sP~dK~~lV~~Lq~~-g~vVa~~GDG~NDapALk~AdVGia 783 (825)
.....|..+++.++++ ...+.++|||.||..|.++||+-+|
T Consensus 144 ~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1123599999999887 8889999999999999999998775
No 69
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.09 E-value=7.1e-06 Score=81.64 Aligned_cols=97 Identities=22% Similarity=0.301 Sum_probs=70.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc----ccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV----EKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~----~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
+++|++++.++.|++.|+++.++||.....+..+++.+|+..-.... ..+ .+.|+... +
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g-~~~g~~~~------------~---- 135 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG-LLTGPIEG------------Q---- 135 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC-EEeCccCC------------c----
Confidence 36899999999999999999999999999999999999986311000 000 11121000 0
Q ss_pred EecCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhC
Q 003371 741 ARSSPFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEA 778 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~A 778 (825)
....+..|...++.+++. .+.+.++|||.||.+|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 124567899999887654 34689999999999999876
No 70
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.08 E-value=1.6e-05 Score=82.35 Aligned_cols=135 Identities=17% Similarity=0.120 Sum_probs=86.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE---E
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM---A 741 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~---a 741 (825)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +.... .......++|..+..-. |.-... .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~-i~~n~~~~~~~~~~~~k--------p~p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQ-IYCNGSDFSGEYITITW--------PHPCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCc-EEEeEEEecCCeeEEec--------cCCccccccc
Confidence 68999999999999999999999999999999999998 64310 00001122332221000 000000 0
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHh--cCeeeccCCchHHHHHHH
Q 003371 742 RSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKES--SDIVILDDDFTSVATVLS 813 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~a--aDivlldd~f~sIv~~i~ 813 (825)
++ ...|..+++.++.....+.|+|||.||.+|.+.||+.++-+ .-.+.+++. +.+.+ ++|..|...++
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l~ 213 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTELK 213 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHHH
Confidence 01 13488888888777778899999999999999999977632 111222221 33332 57888877763
No 71
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.04 E-value=2.6e-05 Score=80.83 Aligned_cols=126 Identities=24% Similarity=0.355 Sum_probs=89.1
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.||+.++++.|++.|+++.++||.....+..+.+..|+.... ..++.+... .+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~------------------~~~ 148 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF-----SVVIGGDSL------------------PNK 148 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-----cEEEcCCCC------------------CCC
Confidence 457899999999999999999999999999999999999985421 122222211 112
Q ss_pred C--HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc-cEe--cCCC-chHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 744 S--PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV-GLS--MGIQ-GTEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 744 s--P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV-Gia--mg~~-gt~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
. |+--..+.+.++-....+.++||+.||..|.+.|++ +|. .|.. ..+.....+|.++ +++..+..++..
T Consensus 149 kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 149 KPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred CcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 2 222233444444445678899999999999999988 444 3322 3455556788887 589999988764
No 72
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.00 E-value=2.4e-05 Score=79.81 Aligned_cols=106 Identities=15% Similarity=0.110 Sum_probs=77.3
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc-cc--cceeeechhhhcCCHHHHHhhccCeeE
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ-VE--KGEVVEGVEFRNYTDEERIQKVDKIRV 739 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~-~~--~~~vi~G~~~~~~~~~~~~~~~~~~~V 739 (825)
..+++|++.+.++.+++.|+++.++||-....+..+++.+|+..--.. .. ..-..+|+..
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~----------------- 147 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID----------------- 147 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc-----------------
Confidence 457899999999999999999999999999999999999998542110 00 0001111100
Q ss_pred EEecCHHHHHHHHHHHHh-CC---CEEEEEcCCccCHHHhhhCCccEecC
Q 003371 740 MARSSPFDKLLMVQCLKK-KG---HVVAVTGDGTNDAPALKEADVGLSMG 785 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~-~g---~vVa~~GDG~NDapALk~AdVGiamg 785 (825)
--.+.+..|...++.+.+ .+ +.+.++||+.+|.|+++.|+.++++.
T Consensus 148 ~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 012345788887776654 33 25788999999999999999999886
No 73
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.98 E-value=8.7e-05 Score=77.78 Aligned_cols=66 Identities=18% Similarity=0.261 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcC----eeeccCCchHHHHHHH
Q 003371 747 DKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSD----IVILDDDFTSVATVLS 813 (825)
Q Consensus 747 dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaD----ivlldd~f~sIv~~i~ 813 (825)
.|...++.|.++ | ..|+++||+.||.+||+.|++|++|+ ++.+..|+.|| +|.-.++=..+.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 677777777654 3 24788999999999999999999999 78888999999 6655556667777774
No 74
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.92 E-value=2.2e-05 Score=73.96 Aligned_cols=113 Identities=20% Similarity=0.300 Sum_probs=90.3
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHH
Q 003371 672 KAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLM 751 (825)
Q Consensus 672 ~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~l 751 (825)
..|+.+.++||+|-++||.+...++.=|+++||-. ++- --.+|...
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------~~q--G~~dK~~a 87 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------LYQ--GISDKLAA 87 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce--------------------------------eee--chHhHHHH
Confidence 68999999999999999999999999999999964 221 23688888
Q ss_pred HHHHHhC----CCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccC----CchHHHHHHHHhHHhh
Q 003371 752 VQCLKKK----GHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDD----DFTSVATVLSPGDQLH 819 (825)
Q Consensus 752 V~~Lq~~----g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd----~f~sIv~~i~~gR~i~ 819 (825)
.+.|.++ -+-||++||..||-|+|+...+++|.. .+..-.++.||+|+-.. -+.-+..+|..++.-+
T Consensus 88 ~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~ 162 (170)
T COG1778 88 FEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKL 162 (170)
T ss_pred HHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcH
Confidence 8777665 356999999999999999999999997 78888888888887644 2455555555555443
No 75
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.87 E-value=7.3e-05 Score=77.49 Aligned_cols=128 Identities=24% Similarity=0.351 Sum_probs=96.1
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar 742 (825)
..++-||++++++.|+++|++..++|+.+...+..+.+..|+..... .++.+..+. ...
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~-----~i~g~~~~~----------------~~K 145 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD-----VIVGGDDVP----------------PPK 145 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc-----eEEcCCCCC----------------CCC
Confidence 45678999999999999999999999999999999999999986421 111112111 112
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCC---ccEecCCC-chHHHHHhcCeeeccCCchHHHHHHH
Q 003371 743 SSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEAD---VGLSMGIQ-GTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 743 ~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~Ad---VGiamg~~-gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
-.|.....+.+.+.-..+.+.||||..+|..|=+.|+ ||+..|.. +.......+|.++- ++..+...+.
T Consensus 146 P~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el~~~l~ 218 (220)
T COG0546 146 PDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAELLALLA 218 (220)
T ss_pred cCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHHHHHHh
Confidence 2455555555555544347999999999999999998 88988853 56777788999987 7777776653
No 76
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.81 E-value=5.6e-05 Score=70.77 Aligned_cols=113 Identities=19% Similarity=0.170 Sum_probs=75.7
Q ss_pred cccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 661 GIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 661 ~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
....++++++++.+++|++.|++++++||.....+....+++|+..... .++......................+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~~~~~~~~~~~~~ 94 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFD-----PVITSNGAAIYYPKEGLFLGGGPFDI 94 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhh-----heeccchhhhhccccccccccccccc
Confidence 4456899999999999999999999999999999999999999843211 11111100000000000001111234
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 003371 741 ARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~A 778 (825)
.+-.|..+..+.+.+......+.++||+.||..|++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~ 132 (139)
T cd01427 95 GKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAA 132 (139)
T ss_pred CCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHc
Confidence 45667677777777665567799999999999999984
No 77
>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases []. This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding
Probab=97.76 E-value=1.1e-05 Score=59.82 Aligned_cols=27 Identities=22% Similarity=0.257 Sum_probs=25.4
Q ss_pred cchHHHHhHHHhh-hhhccchhhhhccc
Q 003371 22 TLTKAQKRWRLAY-WTIYSFRAMLSVLP 48 (825)
Q Consensus 22 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 48 (825)
+++++++|||+|+ +|+|++||||++++
T Consensus 13 ~s~e~l~rWR~a~~lv~N~~RRFR~~~d 40 (47)
T PF12515_consen 13 SSEEALRRWRQAVGLVKNARRRFRYTAD 40 (47)
T ss_pred CCHHHHHHHHHHhHHhccccceeeeccc
Confidence 6799999999999 99999999999986
No 78
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.76 E-value=0.00017 Score=75.00 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=39.4
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~ 706 (825)
.+..-++++++|++|+++|+.++++||.....+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 35566789999999999999999999999999999999999843
No 79
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.71 E-value=0.00018 Score=73.56 Aligned_cols=126 Identities=18% Similarity=0.228 Sum_probs=85.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+.....+..+-+..|+.... ..++...++. ..+-.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 133 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLF-----DHVIGSDEVP----------------RPKPA 133 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhe-----eeEEecCcCC----------------CCCCC
Confidence 67899999999999999999999999999999999999986421 1111111110 11112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEe---cCC-CchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLS---MGI-QGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGia---mg~-~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+-=..+++.++-..+.++|+||+.+|..+-++|++... -|. +..+..++.+|+++- ++..+..+++
T Consensus 134 ~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~~~~ 204 (205)
T TIGR01454 134 PDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLALCR 204 (205)
T ss_pred hHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHHHhh
Confidence 222223333333234669999999999999999988643 331 233456778999874 6777766553
No 80
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.71 E-value=0.00035 Score=73.83 Aligned_cols=150 Identities=15% Similarity=0.122 Sum_probs=95.1
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccc--cccccceeeechhh------------------
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLD--QQVEKGEVVEGVEF------------------ 722 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~--~~~~~~~vi~G~~~------------------ 722 (825)
..+..|...++++++++.|+.++.+||......+.+.+++++..+. ...++..+..+...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3567799999999999999999999999999999999999986542 11122222211100
Q ss_pred --------hcC-----------------CHHH-------HHhhcc----CeeEEE------ecCH--HHHHHHHHHHHhC
Q 003371 723 --------RNY-----------------TDEE-------RIQKVD----KIRVMA------RSSP--FDKLLMVQCLKKK 758 (825)
Q Consensus 723 --------~~~-----------------~~~~-------~~~~~~----~~~V~a------r~sP--~dK~~lV~~Lq~~ 758 (825)
..+ ..+. +.+.+. ++.+.. ...| ..|..-++.|.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 000 0000 111111 111111 1233 3688888887664
Q ss_pred ----CCEEEEEcCCccCHHHhhh-CCccEecCCCchHHHHHhcC-------eeeccCCchHHHHHHH
Q 003371 759 ----GHVVAVTGDGTNDAPALKE-ADVGLSMGIQGTEVAKESSD-------IVILDDDFTSVATVLS 813 (825)
Q Consensus 759 ----g~vVa~~GDG~NDapALk~-AdVGiamg~~gt~vAk~aaD-------ivlldd~f~sIv~~i~ 813 (825)
...|+++||+.||.+||+. ++.|++|+ ++.+..|+.++ ++--.-.-+.|.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3568999999999999998 77999999 78887776543 3222223455665553
No 81
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.69 E-value=0.0004 Score=71.88 Aligned_cols=39 Identities=13% Similarity=0.165 Sum_probs=36.1
Q ss_pred cccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 003371 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 667 R~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~ 705 (825)
-+.++++|+.++++|+.+.++||.....+..+.+++|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
No 82
>PRK08238 hypothetical protein; Validated
Probab=97.52 E-value=0.00042 Score=79.68 Aligned_cols=101 Identities=19% Similarity=0.205 Sum_probs=75.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
|++|++.+.+++++++|+++.++|+-+...+..+++..|+.+. ++.+++ ..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~--------Vigsd~------------------~~~~k 125 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG--------VFASDG------------------TTNLK 125 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE--------EEeCCC------------------ccccC
Confidence 5789999999999999999999999999999999999998321 222211 11355
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAK 793 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk 793 (825)
|+.|...++.....+. ..++||..||.|+++.|+-.++++ .+..+++
T Consensus 126 g~~K~~~l~~~l~~~~-~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l~~ 172 (479)
T PRK08238 126 GAAKAAALVEAFGERG-FDYAGNSAADLPVWAAARRAIVVG-ASPGVAR 172 (479)
T ss_pred CchHHHHHHHHhCccC-eeEecCCHHHHHHHHhCCCeEEEC-CCHHHHH
Confidence 6667654442222222 567899999999999999999998 4544433
No 83
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.48 E-value=0.00053 Score=73.47 Aligned_cols=127 Identities=24% Similarity=0.293 Sum_probs=82.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++.|++.++++.|++.|+++.++|+-+...+..+..+.|+.... ..++.+.+.. ...-
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-----~~i~~~d~~~----------------~~Kp 158 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-----RWIIGGDTLP----------------QKKP 158 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-----eEEEecCCCC----------------CCCC
Confidence 478899999999999999999999999999999999998885421 1122221110 0011
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc---EecCC-CchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG---LSMGI-QGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG---iamg~-~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
.|+-=..+.+.+.-..+.+.|+||+.||..|.+.|++- +..|. ...+..+..+|.++. ++..+..++.
T Consensus 159 ~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~~ 230 (272)
T PRK13223 159 DPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGCA 230 (272)
T ss_pred CcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHHh
Confidence 11111222222222245688999999999999999973 33332 122344567898873 7888876644
No 84
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.41 E-value=0.00074 Score=69.54 Aligned_cols=125 Identities=17% Similarity=0.191 Sum_probs=84.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|+++|+++.++|+.....+..+-+..|+.... ..++.+.+.. .....
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f-----~~i~~~~~~~----------------~~Kp~ 140 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFF-----DVVITLDDVE----------------HAKPD 140 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhce-----eEEEecCcCC----------------CCCCC
Confidence 36799999999999999999999999999999999999986521 1122222111 01122
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEecCCCch-HHHHHhcCeeeccCCchHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV---GLSMGIQGT-EVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV---Giamg~~gt-~vAk~aaDivlldd~f~sIv~~i 812 (825)
|+-=..+.+.+.-....+.|+||+.+|..|-++|++ |+.-|.... +.....+|.++- ++..+..++
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 332233333333334568899999999999999998 444442222 244456888765 788887765
No 85
>PLN02382 probable sucrose-phosphatase
Probab=97.36 E-value=0.0016 Score=73.86 Aligned_cols=147 Identities=19% Similarity=0.180 Sum_probs=92.1
Q ss_pred CcccHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccc--cccceeeechhh--------------------
Q 003371 666 CRPGVQKAV-EACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQ--VEKGEVVEGVEF-------------------- 722 (825)
Q Consensus 666 lR~~v~~aI-~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~--~~~~~vi~G~~~-------------------- 722 (825)
+.+....++ +++++.|+..+..||..+..+..+.++.++..+... .++..+..+..+
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333445555 889999999999999999999999999998876310 011111111100
Q ss_pred ---hcC--------------------CH-------HHHHhhcc----CeeE------EEecCHH--HHHHHHHHHHhC--
Q 003371 723 ---RNY--------------------TD-------EERIQKVD----KIRV------MARSSPF--DKLLMVQCLKKK-- 758 (825)
Q Consensus 723 ---~~~--------------------~~-------~~~~~~~~----~~~V------~ar~sP~--dK~~lV~~Lq~~-- 758 (825)
..+ .+ +++.+.+. .+.+ +-...|. .|..-++.|.++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 000 00 01111111 1121 1223333 588888877664
Q ss_pred --C---CEEEEEcCCccCHHHhhhCC-ccEecCCCchHHHHHhc--------Ceeec-cCCchHHHHHHH
Q 003371 759 --G---HVVAVTGDGTNDAPALKEAD-VGLSMGIQGTEVAKESS--------DIVIL-DDDFTSVATVLS 813 (825)
Q Consensus 759 --g---~vVa~~GDG~NDapALk~Ad-VGiamg~~gt~vAk~aa--------Divll-dd~f~sIv~~i~ 813 (825)
| ..|.++||+.||.+||+.|+ .||+|| ++.+..|+.+ +++.. +.+-..|..+++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 2 46889999999999999999 699999 7888888643 55544 335566777774
No 86
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.35 E-value=0.00099 Score=70.58 Aligned_cols=42 Identities=5% Similarity=0.055 Sum_probs=38.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~ 706 (825)
..-+.++++|++|+++||.|++.||-.......+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455779999999999999999999999999999999999864
No 87
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.29 E-value=0.00088 Score=68.72 Aligned_cols=120 Identities=15% Similarity=0.249 Sum_probs=80.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|++.|+++.++|+-+...+..+.+..|+.... ..++.+.+. .+..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~------------------~~~K 141 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-----SVLIGGDSL------------------AQRK 141 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-----cEEEecCCC------------------CCCC
Confidence 57899999999999999999999999999999999999986421 112221111 1122
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccEec---CCCc-hHHHHHhcCeeeccCCchHHHH
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLSM---GIQG-TEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGiam---g~~g-t~vAk~aaDivlldd~f~sIv~ 810 (825)
|. ...+.+.+++. .+.+.|+||..+|..|.++|++-... |-.. .+.....+|.++- ++..+..
T Consensus 142 p~-p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~~ 211 (213)
T TIGR01449 142 PH-PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELPP 211 (213)
T ss_pred CC-hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHHh
Confidence 31 12333334433 35688999999999999999986542 2111 2333456888774 5666544
No 88
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.29 E-value=0.0015 Score=76.68 Aligned_cols=40 Identities=10% Similarity=0.089 Sum_probs=36.3
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~ 705 (825)
.-+.++++|+.++++|+.+++.||.....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3356899999999999999999999999999999999974
No 89
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.21 E-value=0.0013 Score=68.09 Aligned_cols=121 Identities=18% Similarity=0.273 Sum_probs=81.7
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.||+.++++.|++.|+++.++|+........+.++.||.... ..++.+.++. ..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----~~~~~~~~~~------------------~~ 147 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF-----DALASAEKLP------------------YS 147 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc-----cEEEEcccCC------------------CC
Confidence 467899999999999999999999999999999999999986532 1222222111 11
Q ss_pred CHHHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEecCCCc---hHHHHHhcCeeeccCCchHHHH
Q 003371 744 SPFDKLLMVQCLKKKG---HVVAVTGDGTNDAPALKEADVGLSMGIQG---TEVAKESSDIVILDDDFTSVAT 810 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g---~vVa~~GDG~NDapALk~AdVGiamg~~g---t~vAk~aaDivlldd~f~sIv~ 810 (825)
.|.-. -+...+++.| +.+.|+||..||..|.+.|++....=..+ .+.-...+|+++. +|..+..
T Consensus 148 Kp~~~-~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~~ 217 (222)
T PRK10826 148 KPHPE-VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELTA 217 (222)
T ss_pred CCCHH-HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHhh
Confidence 22221 3344444443 45889999999999999999765432122 2222345788775 6776654
No 90
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.20 E-value=0.003 Score=67.00 Aligned_cols=132 Identities=17% Similarity=0.251 Sum_probs=84.4
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc-------ccceeeechhhhcCCHHHHHhhccC
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV-------EKGEVVEGVEFRNYTDEERIQKVDK 736 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~-------~~~~vi~G~~~~~~~~~~~~~~~~~ 736 (825)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+..++... ...-++.|.. . |-
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~--~----------P~ 187 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK--G----------PL 187 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC--C----------Cc
Confidence 578999999999999999999999999999999999999986443221 0011222210 0 00
Q ss_pred eeEEEecCHHHHHHHHHH-----HH--hCCCEEEEEcCCccCHHHhhhC---CccEecCC--Cc----hHHHHHhcCeee
Q 003371 737 IRVMARSSPFDKLLMVQC-----LK--KKGHVVAVTGDGTNDAPALKEA---DVGLSMGI--QG----TEVAKESSDIVI 800 (825)
Q Consensus 737 ~~V~ar~sP~dK~~lV~~-----Lq--~~g~vVa~~GDG~NDapALk~A---dVGiamg~--~g----t~vAk~aaDivl 800 (825)
+. ...|...+.. ++ .....|.|+|||.||++|..-. .-=|..|- .- -+-=+++-||||
T Consensus 188 --i~----~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 188 --IH----TFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred --cc----ccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 11 1345443331 22 1235688999999999995433 11122221 11 123457899999
Q ss_pred ccCCchHHHHHHH
Q 003371 801 LDDDFTSVATVLS 813 (825)
Q Consensus 801 ldd~f~sIv~~i~ 813 (825)
.+|.=-.++.+|.
T Consensus 262 ~~D~t~~v~~~il 274 (277)
T TIGR01544 262 VQDETLEVANSIL 274 (277)
T ss_pred ECCCCchHHHHHH
Confidence 9998777777653
No 91
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.18 E-value=0.001 Score=70.95 Aligned_cols=140 Identities=12% Similarity=0.223 Sum_probs=84.6
Q ss_pred CCcccHHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCc--cccccc----cc------------------------
Q 003371 665 PCRPGVQKAVEACQS-AGVEIKMITGDNVFTAKAIATECGIL--RLDQQV----EK------------------------ 713 (825)
Q Consensus 665 plR~~v~~aI~~l~~-aGI~V~mvTGD~~~tA~aIA~~~GI~--~~~~~~----~~------------------------ 713 (825)
.+-++++++|+.|++ .|+.|.++||.....+..+.+.+++. ..+... ..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 455899999999998 79999999999999999988877642 111000 00
Q ss_pred ---ceeeech------hhhcCCH--HH---H----HhhccCeeE-----EEecCH--HHHHHHHHHHHhC----CCEEEE
Q 003371 714 ---GEVVEGV------EFRNYTD--EE---R----IQKVDKIRV-----MARSSP--FDKLLMVQCLKKK----GHVVAV 764 (825)
Q Consensus 714 ---~~vi~G~------~~~~~~~--~~---~----~~~~~~~~V-----~ar~sP--~dK~~lV~~Lq~~----g~vVa~ 764 (825)
+..++-+ .++...+ +. + .+..+...+ +-...| .+|..-|+.+.+. ...|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0001000 0111111 11 1 111121111 112223 3788888776654 356888
Q ss_pred EcCCccCHHHhhhC----CccEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 765 TGDGTNDAPALKEA----DVGLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 765 ~GDG~NDapALk~A----dVGiamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
+||+.||.+|++.+ +.||+|| ++. ..|++.|. +...+...
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~ 239 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSW 239 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHH
Confidence 99999999999999 9999999 443 33677666 44444433
No 92
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.07 E-value=0.003 Score=65.82 Aligned_cols=127 Identities=14% Similarity=0.146 Sum_probs=85.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+.... ..++.+.... ...-.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 153 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC-----AVLIGGDTLA----------------ERKPH 153 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc-----cEEEecCcCC----------------CCCCC
Confidence 57899999999999999999999999999998888889886421 1222222110 11222
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEe---cCCC-c-hHHHHHhcCeeeccCCchHHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLS---MGIQ-G-TEVAKESSDIVILDDDFTSVATVLSP 814 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGia---mg~~-g-t~vAk~aaDivlldd~f~sIv~~i~~ 814 (825)
|+-=..+.+.+.-..+.+.|+||+.||..|-+.|++-.. -|.. . .+.....+|+++- ++..|...+.|
T Consensus 154 p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~~~~~~ 226 (229)
T PRK13226 154 PLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLWNPATW 226 (229)
T ss_pred HHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHHHHhcC
Confidence 322233444444335668999999999999999987642 2321 1 1233456899885 78888877766
No 93
>PTZ00174 phosphomannomutase; Provisional
Probab=97.00 E-value=0.004 Score=65.76 Aligned_cols=54 Identities=20% Similarity=0.343 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhCCCEEEEEcC----CccCHHHhhhC-CccEecCCCchHHHHHhcCeee
Q 003371 746 FDKLLMVQCLKKKGHVVAVTGD----GTNDAPALKEA-DVGLSMGIQGTEVAKESSDIVI 800 (825)
Q Consensus 746 ~dK~~lV~~Lq~~g~vVa~~GD----G~NDapALk~A-dVGiamg~~gt~vAk~aaDivl 800 (825)
-+|..-++.|.++.+-|+++|| |-||.+||+.| -.|++++ ++.+..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 3688888888777678999999 99999999976 6788887 88998888877654
No 94
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.84 E-value=0.0055 Score=63.24 Aligned_cols=122 Identities=24% Similarity=0.352 Sum_probs=82.1
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc--ccccccccceeeechhhhcCCHHHHHhhccCeeEEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL--RLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~--~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a 741 (825)
.++.||+++.++.|++.|+++.++|+-....+..+.+..|+. .. ...++.+.+..
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~-----f~~i~~~~~~~------------------ 142 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDD-----VDAVVCPSDVA------------------ 142 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhcc-----CCEEEcCCcCC------------------
Confidence 478999999999999999999999999999999999999986 32 11222222211
Q ss_pred ecCHHHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCccEecC-CCch----HHHHHhcCeeeccCCchHHHHH
Q 003371 742 RSSPFDKLLMVQCLKKKG----HVVAVTGDGTNDAPALKEADVGLSMG-IQGT----EVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~g----~vVa~~GDG~NDapALk~AdVGiamg-~~gt----~vAk~aaDivlldd~f~sIv~~ 811 (825)
+..|.. ..+-..+++.| ..+.|+||+.+|..|-+.|++..+++ ..|. +.....+|.++- +++.+..+
T Consensus 143 ~~KP~p-~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~--~~~~l~~~ 218 (220)
T TIGR03351 143 AGRPAP-DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD--SVADLPAL 218 (220)
T ss_pred CCCCCH-HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec--CHHHHHHh
Confidence 122322 12333444432 56899999999999999999986321 1222 222345777764 67766554
No 95
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.83 E-value=0.0079 Score=64.41 Aligned_cols=119 Identities=15% Similarity=0.220 Sum_probs=81.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+.+...+..+-+.+|+.... ..++.+.+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-----~~vi~~~~~---------------------- 194 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-----SVVQAGTPI---------------------- 194 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-----EEEEecCCC----------------------
Confidence 56799999999999999999999999999999999999986531 122222211
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccEe---cCCCc-hHHHHHhcCeeeccCCchHHHHHH
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLS---MGIQG-TEVAKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGia---mg~~g-t~vAk~aaDivlldd~f~sIv~~i 812 (825)
+..+..+.+.+++. .+.++|+||+.+|..|-+.|++-.. -|... .+.....+|+++ +++..|...+
T Consensus 195 ~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 195 LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 00112233333332 3568999999999999999987543 33211 123344689887 4788887765
No 96
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.79 E-value=0.006 Score=62.70 Aligned_cols=107 Identities=13% Similarity=0.107 Sum_probs=73.6
Q ss_pred CCcccHHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVE-ACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~-~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++|++.+.|+ .+++.|+++.++|+=....++.+|+..|+..... ++ |.++..-.. .+ ..-..|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~------~i-~t~le~~~g-------g~-~~g~~c 158 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN------LI-ASQIERGNG-------GW-VLPLRC 158 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc------EE-EEEeEEeCC-------ce-EcCccC
Confidence 46899999996 7888999999999999999999999966643211 11 111110000 00 011346
Q ss_pred CHHHHHHHHHHHH-hCCCEEEEEcCCccCHHHhhhCCccEecCC
Q 003371 744 SPFDKLLMVQCLK-KKGHVVAVTGDGTNDAPALKEADVGLSMGI 786 (825)
Q Consensus 744 sP~dK~~lV~~Lq-~~g~vVa~~GDG~NDapALk~AdVGiamg~ 786 (825)
.-+.|..-++..- ......-+=||+.||.|+|+.||-.++++.
T Consensus 159 ~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 159 LGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred CChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 6788987666432 222344578999999999999999999863
No 97
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.72 E-value=0.0072 Score=61.62 Aligned_cols=39 Identities=23% Similarity=0.377 Sum_probs=36.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECG 703 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~G 703 (825)
++.+++.+++++|++.|+.+.++||.....+..+.++++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477999999999999999999999999999999998854
No 98
>PRK11590 hypothetical protein; Provisional
Probab=96.72 E-value=0.0084 Score=61.67 Aligned_cols=104 Identities=15% Similarity=0.125 Sum_probs=73.4
Q ss_pred CCcccHHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhc-CCHHHHHhhccCeeE-EE
Q 003371 665 PCRPGVQKAV-EACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRN-YTDEERIQKVDKIRV-MA 741 (825)
Q Consensus 665 plR~~v~~aI-~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~-~~~~~~~~~~~~~~V-~a 741 (825)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+.... . ++ |.++.. ++ -++ -.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-----~-~i-~t~l~~~~t----------g~~~g~ 157 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-----N-LI-ASQMQRRYG----------GWVLTL 157 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-----c-eE-EEEEEEEEc----------cEECCc
Confidence 4589999999 5788899999999999999999999999963211 0 11 111110 00 001 12
Q ss_pred ecCHHHHHHHHHHH-HhCCCEEEEEcCCccCHHHhhhCCccEecC
Q 003371 742 RSSPFDKLLMVQCL-KKKGHVVAVTGDGTNDAPALKEADVGLSMG 785 (825)
Q Consensus 742 r~sP~dK~~lV~~L-q~~g~vVa~~GDG~NDapALk~AdVGiamg 785 (825)
.|..+.|..-++.. .......-+=||..||.|+|+.|+-.++++
T Consensus 158 ~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 158 RCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred cCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 36678898776644 223344456799999999999999999986
No 99
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.65 E-value=0.011 Score=62.88 Aligned_cols=124 Identities=13% Similarity=0.140 Sum_probs=80.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+++.++.|++.|+++.++|+-....+..+-+.+||... ...++.+.+... ..-.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-----Fd~ii~~~d~~~----------------~KP~ 167 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF-----FSVVLAAEDVYR----------------GKPD 167 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh-----CcEEEecccCCC----------------CCCC
Confidence 5689999999999999999999999999999999999998653 223444433221 1112
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE-ecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL-SMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi-amg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
|+-=....+.+.-....+.|+||..+|..|-+.|++-. ++...+.......+|.++- +++.+...
T Consensus 168 Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el~~~ 233 (260)
T PLN03243 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDLSVV 233 (260)
T ss_pred HHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHHHHH
Confidence 22112223333323455889999999999999999843 2211222222234787755 66665444
No 100
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.64 E-value=0.0095 Score=63.02 Aligned_cols=94 Identities=17% Similarity=0.192 Sum_probs=67.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+.....+..+-++.|+.... ...++.+.+. .+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f----~d~ii~~~~~------------------~~~K 156 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR----PDYNVTTDDV------------------PAGR 156 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC----CceEEccccC------------------CCCC
Confidence 46799999999999999999999999999999999999986521 0122222211 1122
Q ss_pred HHHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCcc
Q 003371 745 PFDKLLMVQCLKKKG----HVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g----~vVa~~GDG~NDapALk~AdVG 781 (825)
| +...+.+.+++.| +.+.|+||..+|..|-+.|++-
T Consensus 157 P-~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 157 P-APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred C-CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 3 2234445555544 3488999999999999999864
No 101
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.62 E-value=0.011 Score=63.27 Aligned_cols=123 Identities=15% Similarity=0.172 Sum_probs=82.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+.... ...++.+.+. .+..
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~----~d~i~~~~~~------------------~~~K 158 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR----PDHVVTTDDV------------------PAGR 158 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC----ceEEEcCCcC------------------CCCC
Confidence 46799999999999999999999999999988888888765421 0112222111 1112
Q ss_pred HHHHHHHHHHHHhCC----CEEEEEcCCccCHHHhhhCCc---cEecCCCc------------------------hHHHH
Q 003371 745 PFDKLLMVQCLKKKG----HVVAVTGDGTNDAPALKEADV---GLSMGIQG------------------------TEVAK 793 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g----~vVa~~GDG~NDapALk~AdV---Giamg~~g------------------------t~vAk 793 (825)
| +..-+.+.+++.| +.+.|+||+.+|..|-+.|++ |+.-|... .+...
T Consensus 159 P-~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (267)
T PRK13478 159 P-YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRA 237 (267)
T ss_pred C-ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 3 2233455555543 458999999999999999996 55555220 22334
Q ss_pred HhcCeeeccCCchHHHHHH
Q 003371 794 ESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 794 ~aaDivlldd~f~sIv~~i 812 (825)
..+|+++- ++..+...+
T Consensus 238 ~~a~~vi~--~~~~l~~~l 254 (267)
T PRK13478 238 AGAHYVID--TIADLPAVI 254 (267)
T ss_pred cCCCeehh--hHHHHHHHH
Confidence 45788774 677777655
No 102
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.60 E-value=0.013 Score=61.91 Aligned_cols=120 Identities=17% Similarity=0.148 Sum_probs=80.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||... ...++.+.+... ..-.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-----Fd~iv~~~~~~~----------------~KP~ 166 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF-----FQAVIIGSECEH----------------AKPH 166 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh-----CcEEEecCcCCC----------------CCCC
Confidence 5679999999999999999999999999999999999998753 122333332221 1122
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE---ecCCCchHHHHHhcCeeeccCCchH
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL---SMGIQGTEVAKESSDIVILDDDFTS 807 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi---amg~~gt~vAk~aaDivlldd~f~s 807 (825)
|+-=....+.+.-..+.+.|+||..+|..|-++|++-. .-|....+.....+|.++- ++..
T Consensus 167 p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~--~~~e 230 (248)
T PLN02770 167 PDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIK--DYED 230 (248)
T ss_pred hHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEec--cchh
Confidence 32223333333333456899999999999999998743 2231222233446888875 4554
No 103
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.50 E-value=0.015 Score=58.35 Aligned_cols=144 Identities=18% Similarity=0.232 Sum_probs=93.0
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCccccccc----------------------ccceeeechhhh
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQV----------------------EKGEVVEGVEFR 723 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~----------------------~~~~vi~G~~~~ 723 (825)
+-||+.++.+.++.. ...+++|---.+-++++|..+|+......- .....++|+++-
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelf 162 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELF 162 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHH
Confidence 449999999999866 566777777888899999999996432110 001122333211
Q ss_pred --------cCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCC-c-cEecCCCchH
Q 003371 724 --------NYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEAD-V-GLSMGIQGTE 790 (825)
Q Consensus 724 --------~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~Ad-V-Giamg~~gt~ 790 (825)
.+.+.|.-+++.++.+... ..|.++++.+-+. ....+++||.+.|..||+.+. - |+|+.-+|.+
T Consensus 163 e~lDe~F~rLip~E~gki~~~vk~VGg---g~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 163 EKLDELFSRLIPSEVGKIVESVKAVGG---GEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHHHhhcCHHHHHHHHHhhhhccC---cchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 1122222233333333222 2455555554443 234678999999999999984 2 3666668999
Q ss_pred HHHHhcCeeeccCCchHHHHHHH
Q 003371 791 VAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 791 vAk~aaDivlldd~f~sIv~~i~ 813 (825)
-|...||+.+...+..+...+|.
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 99999999999888888877764
No 104
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.47 E-value=0.01 Score=60.27 Aligned_cols=94 Identities=17% Similarity=0.124 Sum_probs=67.2
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEe
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMAR 742 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar 742 (825)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+.... ..++.+.+ +..+
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f-----~~~~~~~~-----------------~~~K 161 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILF-----PVQIWMED-----------------CPPK 161 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhC-----CEEEeecC-----------------CCCC
Confidence 3556788899999999999999999999999999999999986431 12222221 1113
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 003371 743 SSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778 (825)
Q Consensus 743 ~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~A 778 (825)
-.|+--..+.+.+.-..+.+.|+||+.+|..|-+.|
T Consensus 162 P~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 162 PNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred cCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 345444445555544456789999999999987765
No 105
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.47 E-value=0.024 Score=69.39 Aligned_cols=170 Identities=19% Similarity=0.218 Sum_probs=101.3
Q ss_pred HHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecc--cCCCcccHHHHHHHHHh-CCCeEEE
Q 003371 610 MENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGI--KDPCRPGVQKAVEACQS-AGVEIKM 686 (825)
Q Consensus 610 ~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i--~DplR~~v~~aI~~l~~-aGI~V~m 686 (825)
++.....|.....|.+++-| |-|++..... ...+-+++.++++.|.+ .|+.|++
T Consensus 480 ~~~~~~~y~~~~~rLi~~D~-----------------------DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~i 536 (726)
T PRK14501 480 AEEIIARYRAASRRLLLLDY-----------------------DGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAI 536 (726)
T ss_pred HHHHHHHHHhccceEEEEec-----------------------CccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEE
Confidence 44555666555567777655 3355543211 12367899999999999 6999999
Q ss_pred EcCCCHHHHHHHHHHcCC--cccccccccceee-echhhh----------------------------------------
Q 003371 687 ITGDNVFTAKAIATECGI--LRLDQQVEKGEVV-EGVEFR---------------------------------------- 723 (825)
Q Consensus 687 vTGD~~~tA~aIA~~~GI--~~~~~~~~~~~vi-~G~~~~---------------------------------------- 723 (825)
+||.............++ +..+ +..+. .|.++.
T Consensus 537 vSGR~~~~l~~~~~~~~l~liaen----G~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~ 612 (726)
T PRK14501 537 ISGRDRDTLERWFGDLPIHLVAEH----GAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHY 612 (726)
T ss_pred EeCCCHHHHHHHhCCCCeEEEEeC----CEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEc
Confidence 999999999887765553 1111 11000 011100
Q ss_pred -cCCH-------HHHH----hhcc--CeeEE-------EecCHHHHHHHHHHHHhC--CCEEEEEcCCccCHHHhhhC--
Q 003371 724 -NYTD-------EERI----QKVD--KIRVM-------ARSSPFDKLLMVQCLKKK--GHVVAVTGDGTNDAPALKEA-- 778 (825)
Q Consensus 724 -~~~~-------~~~~----~~~~--~~~V~-------ar~sP~dK~~lV~~Lq~~--g~vVa~~GDG~NDapALk~A-- 778 (825)
+... +++. ..+. .+.+. -+..--+|...++.+.+. -..|+++||+.||.+|++.+
T Consensus 613 r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~ 692 (726)
T PRK14501 613 RNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPE 692 (726)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhccc
Confidence 0000 0111 1111 11111 122224788888888764 35799999999999999997
Q ss_pred -CccEecCCCchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 779 -DVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 779 -dVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
..+++|| ++ +.+|+..|-+. ..+.+.++
T Consensus 693 ~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 693 TAITVKVG-PG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CceEEEEC-CC----CCcceEeCCCH--HHHHHHHH
Confidence 5889998 43 56678887743 55665554
No 106
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.37 E-value=0.0089 Score=62.35 Aligned_cols=88 Identities=25% Similarity=0.305 Sum_probs=63.2
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGD----NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD----~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V 739 (825)
-.+.|++++.++.+++.|+++.++||. ...|+..+.+..||..... ... +
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~---f~v-----------------------i 166 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM---NPV-----------------------I 166 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc---eeE-----------------------E
Confidence 346688999999999999999999995 4679999999999942110 112 2
Q ss_pred EEecCH--HHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003371 740 MARSSP--FDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 740 ~ar~sP--~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG 781 (825)
++..++ .+|.. .+++.| ++.|+||..+|..|-++|++-
T Consensus 167 l~gd~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 167 FAGDKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred EcCCCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 222221 34443 444554 488999999999999999775
No 107
>PRK11587 putative phosphatase; Provisional
Probab=96.29 E-value=0.023 Score=58.61 Aligned_cols=112 Identities=14% Similarity=0.136 Sum_probs=72.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+... ..++.+.+.. +..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~------~~i~~~~~~~------------------~~K 138 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP------EVFVTAERVK------------------RGK 138 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc------cEEEEHHHhc------------------CCC
Confidence 5689999999999999999999999887777776677776321 1233332221 122
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc-EecCCCchHHHHHhcCeeec
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG-LSMGIQGTEVAKESSDIVIL 801 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVG-iamg~~gt~vAk~aaDivll 801 (825)
|. -.-+...+++. .+.+.|+||..+|..|-+.|++- +++...........+|.++-
T Consensus 139 P~-p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 139 PE-PDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred CC-cHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 32 12233333333 46789999999999999999974 44431112223345677654
No 108
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.22 E-value=0.01 Score=61.92 Aligned_cols=88 Identities=23% Similarity=0.242 Sum_probs=62.4
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEE
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGD----NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD----~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a 741 (825)
+.+++++.++.+++.|+++.++|+- ...++..+.+.+||... ...++.|.....
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~-----f~~i~~~d~~~~----------------- 172 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM-----NPVIFAGDKPGQ----------------- 172 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh-----eeEEECCCCCCC-----------------
Confidence 4455999999999999999999997 67799999999999642 122232222110
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003371 742 RSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG 781 (825)
..| +|. ..+++.| ++.|+||..||..|-++|.+-
T Consensus 173 -~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 -YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred -CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 112 232 2445555 478999999999999999754
No 109
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.21 E-value=0.012 Score=57.19 Aligned_cols=107 Identities=18% Similarity=0.183 Sum_probs=74.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC----Ccccccc-cccceeeechhhhcCCHHHHHhhccCeeE
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECG----ILRLDQQ-VEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~G----I~~~~~~-~~~~~vi~G~~~~~~~~~~~~~~~~~~~V 739 (825)
.++|+-++.++.|++.++.++++|+-...-...+-...+ |..-... ....+..+|+-+-...++ ..
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~d---------s~ 143 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDD---------SQ 143 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCc---------cc
Confidence 578999999999999999999999988777777777665 3211000 001112222211111110 12
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEec
Q 003371 740 MARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSM 784 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiam 784 (825)
| --||...|+.|++..+.+-++|||+.|..|-+.+|+=+|-
T Consensus 144 f----G~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 144 F----GHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred c----CCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 2 2489999999999999999999999999999999988864
No 110
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.99 E-value=0.027 Score=57.07 Aligned_cols=93 Identities=14% Similarity=0.152 Sum_probs=65.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|++.|+++.++|+-+...+..+.+.+||.... ..++...+. ....
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f-----d~i~~s~~~------------------~~~K 148 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF-----DAVLSADAV------------------RAYK 148 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh-----heeEehhhc------------------CCCC
Confidence 57899999999999999999999999999999999999985421 122222211 1123
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVG 781 (825)
|. ...+-..+++. -+.+.++||+.+|..+-+.|++-
T Consensus 149 P~-~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 149 PA-PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CC-HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 32 12223333333 35688999999999999988764
No 111
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=95.92 E-value=0.05 Score=53.17 Aligned_cols=101 Identities=20% Similarity=0.228 Sum_probs=68.4
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHc---C--Cccccccccccee-eechhhhcCCHHHHHhh
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAK---AIATEC---G--ILRLDQQVEKGEV-VEGVEFRNYTDEERIQK 733 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~---aIA~~~---G--I~~~~~~~~~~~v-i~G~~~~~~~~~~~~~~ 733 (825)
+|.+.|+++++++++++.|+++..+||.....+. ....++ | +.. ..++ -.|..+..+..
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~------g~li~~~g~~~~~~~~------ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH------GPVLLSPDRLFAALHR------ 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC------ceEEEcCCcchhhhhc------
Confidence 5788999999999999999999999999998884 455552 3 321 1111 12222211100
Q ss_pred ccCeeEEEecCHHH-HHHHHHHHHh-----CCCEEEEEcCCccCHHHhhhCCc
Q 003371 734 VDKIRVMARSSPFD-KLLMVQCLKK-----KGHVVAVTGDGTNDAPALKEADV 780 (825)
Q Consensus 734 ~~~~~V~ar~sP~d-K~~lV~~Lq~-----~g~vVa~~GDG~NDapALk~AdV 780 (825)
.+. ...|+. |...++.+++ ....++..|++.+|+.|-++++|
T Consensus 93 ----e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 ----EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred ----ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 122 223444 8888888877 45788899999999999998854
No 112
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.86 E-value=0.017 Score=57.62 Aligned_cols=91 Identities=14% Similarity=0.269 Sum_probs=61.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|+++|+++.++|+.. .+..+.+.+|+.... ..++.+.+. .+..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f-----~~~~~~~~~------------------~~~k 141 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYF-----DAIVDPAEI------------------KKGK 141 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhC-----cEEEehhhc------------------CCCC
Confidence 578999999999999999999999743 245677888875431 122322221 1223
Q ss_pred HHHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003371 745 PFDKLLMVQCLKKKG---HVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g---~vVa~~GDG~NDapALk~AdVG 781 (825)
|. ...+-..+++.+ ..+.|+||..+|..|-+.|++-
T Consensus 142 p~-p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 142 PD-PEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred CC-hHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 32 223334444433 4588999999999999999874
No 113
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.85 E-value=0.056 Score=54.04 Aligned_cols=127 Identities=17% Similarity=0.116 Sum_probs=70.1
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCcccccccccceeeechhhhcCCHHHH
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNV---------------FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEER 730 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~---------------~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~ 730 (825)
+.||+.+++++|++.|+++.++|..+. .....+-+..|+.-. . ++.......
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~------~-i~~~~~~~~------ 96 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD------G-IYYCPHHPE------ 96 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc------e-EEECCCCCC------
Confidence 579999999999999999999998762 111223334555210 0 110000000
Q ss_pred HhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC-CchH---HHHHhc--CeeeccCC
Q 003371 731 IQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI-QGTE---VAKESS--DIVILDDD 804 (825)
Q Consensus 731 ~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~-~gt~---vAk~aa--Divlldd~ 804 (825)
...-..+-.|+-=....+.+.-..+.+.|+||..+|..+-+.|++. +++. .|.. .....+ |.++- +
T Consensus 97 -----~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~-~i~v~~g~~~~~~~~~~~~~~~ii~--~ 168 (181)
T PRK08942 97 -----DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT-PVLVRTGKGVTTLAEGAAPGTWVLD--S 168 (181)
T ss_pred -----CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe-EEEEcCCCCchhhhcccCCCceeec--C
Confidence 0000111223322333344433346789999999999999999863 2222 2221 122235 77764 6
Q ss_pred chHHHHHHH
Q 003371 805 FTSVATVLS 813 (825)
Q Consensus 805 f~sIv~~i~ 813 (825)
+..+...+.
T Consensus 169 l~el~~~l~ 177 (181)
T PRK08942 169 LADLPQALK 177 (181)
T ss_pred HHHHHHHHH
Confidence 777777654
No 114
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=95.69 E-value=0.04 Score=54.71 Aligned_cols=94 Identities=21% Similarity=0.215 Sum_probs=61.7
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+-.... ..+..++|+.... ..++.+.+.. ...-.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f-----~~i~~~~~~~----------------~~KP~ 142 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLF-----DVVIFSGDVG----------------RGKPD 142 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHC-----CEEEEcCCCC----------------CCCCC
Confidence 678999999999999999999999988877 6666668886421 1222222111 01111
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV 780 (825)
|+-=..+.+.+.-....+.|+||...|..|-++|++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 143 PDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 222222333333234678899999999999888866
No 115
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.65 E-value=0.068 Score=59.54 Aligned_cols=120 Identities=15% Similarity=0.188 Sum_probs=81.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|+++|+++.++|+-....+..+-+..||... ...++.+.++. +..
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y-----Fd~Iv~sddv~------------------~~K 272 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF-----FSVIVAAEDVY------------------RGK 272 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH-----ceEEEecCcCC------------------CCC
Confidence 4679999999999999999999999999999999999998653 12233333221 122
Q ss_pred HHH--HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCc-hHHHH-HhcCeeeccCCchHHHH
Q 003371 745 PFD--KLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQG-TEVAK-ESSDIVILDDDFTSVAT 810 (825)
Q Consensus 745 P~d--K~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~g-t~vAk-~aaDivlldd~f~sIv~ 810 (825)
|.. =....+.+.-....+.|+||..+|..|-+.|++-. .+..+ ....+ ..+|+++- +|..+..
T Consensus 273 P~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~-IgV~~~~~~~~l~~Ad~iI~--s~~EL~~ 339 (381)
T PLN02575 273 PDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKC-VAVASKHPIYELGAADLVVR--RLDELSI 339 (381)
T ss_pred CCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEE-EEECCCCChhHhcCCCEEEC--CHHHHHH
Confidence 321 12233333333567999999999999999998843 33322 22222 34787764 7777643
No 116
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.63 E-value=0.036 Score=57.15 Aligned_cols=93 Identities=18% Similarity=0.241 Sum_probs=66.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|++.|+++.++|+-+...+....+.+|+.... ..++.+.++ .+..
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----~~i~~~~~~------------------~~~K 150 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFF-----DAVITSEEE------------------GVEK 150 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhc-----cEEEEeccC------------------CCCC
Confidence 57899999999999999999999999988888888999986421 112222211 1223
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCc-cCHHHhhhCCcc
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGT-NDAPALKEADVG 781 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~-NDapALk~AdVG 781 (825)
|... .+...+++. ...+.|+||.. +|..+-+.|++-
T Consensus 151 P~~~-~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 151 PHPK-IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CCHH-HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 3222 233444444 35689999998 999999999873
No 117
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.63 E-value=0.029 Score=60.95 Aligned_cols=107 Identities=15% Similarity=0.040 Sum_probs=75.2
Q ss_pred ccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc-cccccccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 662 IKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR-LDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 662 i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~-~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
..+++.|++.++++.|++.|+++.++||....++..+.+.+|+.. ... .+.|.+- ...+..... -
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~------~i~~~~~----~~~~~~~~~----~ 249 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD------DLIGRPP----DMHFQREQG----D 249 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh------hhhCCcc----hhhhcccCC----C
Confidence 568899999999999999999999999999999999999999864 110 1111110 000000000 1
Q ss_pred EecCHHHHHHHHHHHHh-CCCEEEEEcCCccCHHHhhhCCccE
Q 003371 741 ARSSPFDKLLMVQCLKK-KGHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~-~g~vVa~~GDG~NDapALk~AdVGi 782 (825)
-+-.|+-+...++.+-. .-..+.|+||..+|+.|-+.|++-.
T Consensus 250 ~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 250 KRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 24456677766665533 2377899999999999999998764
No 118
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=95.57 E-value=0.041 Score=58.05 Aligned_cols=45 Identities=29% Similarity=0.407 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhC-C---CEEEEEcCCccCHHHhhhCCccEecCCCchHH
Q 003371 746 FDKLLMVQCLKKK-G---HVVAVTGDGTNDAPALKEADVGLSMGIQGTEV 791 (825)
Q Consensus 746 ~dK~~lV~~Lq~~-g---~vVa~~GDG~NDapALk~AdVGiamg~~gt~v 791 (825)
..|..-|+.|+++ + +.|.++||+.||.+||..++-||.+| ++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 4688888888876 2 34667899999999999999999999 55554
No 119
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.55 E-value=0.055 Score=53.72 Aligned_cols=112 Identities=14% Similarity=0.070 Sum_probs=72.8
Q ss_pred EEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhh
Q 003371 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGD-NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQK 733 (825)
Q Consensus 655 ~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD-~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~ 733 (825)
......+-+-+++||+.+.++.|+++|+++.++|+- ....+..+-..+||....... -+...
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~-----------------~~~~~ 97 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV-----------------PMHSL 97 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc-----------------cHHHh
Confidence 355566666788999999999999999999999965 899999999999985211000 00000
Q ss_pred ccCeeEEEecCHHHH--HHHHHHHHhC------CCEEEEEcCCccCHHHhhhCCccEec
Q 003371 734 VDKIRVMARSSPFDK--LLMVQCLKKK------GHVVAVTGDGTNDAPALKEADVGLSM 784 (825)
Q Consensus 734 ~~~~~V~ar~sP~dK--~~lV~~Lq~~------g~vVa~~GDG~NDapALk~AdVGiam 784 (825)
++. .+.+...+..| ..+.+.+.+. -..+.|+||...|+.|-++|.+-...
T Consensus 98 Fd~-iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 98 FDD-RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred cee-eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 000 01121111122 2334444432 35689999999999999999875543
No 120
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.39 E-value=0.088 Score=49.53 Aligned_cols=92 Identities=17% Similarity=0.106 Sum_probs=62.2
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhcc
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDN--------VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVD 735 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~--------~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~ 735 (825)
-++.|++.++++.|+++|+++.++|+.. .....++.+.+|+... .....+ .
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~-~-------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID------VLYACP-H-------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE------EEEECC-C--------------
Confidence 3678999999999999999999999998 7778888898888521 111111 0
Q ss_pred CeeEEEecCHHHHHHHHHHHH-hCCCEEEEEcC-CccCHHHhhhCCc
Q 003371 736 KIRVMARSSPFDKLLMVQCLK-KKGHVVAVTGD-GTNDAPALKEADV 780 (825)
Q Consensus 736 ~~~V~ar~sP~dK~~lV~~Lq-~~g~vVa~~GD-G~NDapALk~AdV 780 (825)
..+-.|+-=..+.+.++ -..+.++|+|| -.+|..+-+.|++
T Consensus 83 ----~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 ----CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred ----CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 00111221123333331 23466999999 5899999998865
No 121
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.34 E-value=0.054 Score=62.70 Aligned_cols=122 Identities=20% Similarity=0.170 Sum_probs=82.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+.... ..++.+.+.. ....
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f-----~~i~~~d~v~-----------------~~~k 387 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV-----TETFSIEQIN-----------------SLNK 387 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc-----ceeEecCCCC-----------------CCCC
Confidence 67899999999999999999999999999999999999986531 2233333221 1122
Q ss_pred HHHHHHHHHHHHh-CCCEEEEEcCCccCHHHhhhCCcc-EecCC-CchHHHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKK-KGHVVAVTGDGTNDAPALKEADVG-LSMGI-QGTEVAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~-~g~vVa~~GDG~NDapALk~AdVG-iamg~-~gt~vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|+ .+...+++ .-+.+.|+||..+|..|-+.|++- |.+.. .+.+-....+|+++- ++..+...+.
T Consensus 388 P~---~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l~ 454 (459)
T PRK06698 388 SD---LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGILS 454 (459)
T ss_pred cH---HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHHH
Confidence 32 12222222 135689999999999999999973 32221 122212345788874 7888777664
No 122
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.26 E-value=0.04 Score=54.97 Aligned_cols=92 Identities=14% Similarity=0.203 Sum_probs=61.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++.||+.++++.|++.|+++.++|+- ..+..+-+.+|+.... ..++.+.+. .+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f-----~~v~~~~~~------------------~~~ 141 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYF-----DAIVDADEV------------------KEG 141 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHC-----CEeeehhhC------------------CCC
Confidence 468899999999999999999999986 6677888888886421 112222111 112
Q ss_pred CHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc
Q 003371 744 SPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVG 781 (825)
.|... .+-+.+++. .+.+.|+||..+|..+-+.|++-
T Consensus 142 kp~~~-~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 142 KPHPE-TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred CCChH-HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 23221 122333333 35578999999999999999764
No 123
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.20 E-value=0.035 Score=54.26 Aligned_cols=97 Identities=16% Similarity=0.230 Sum_probs=67.8
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++.|++.+.++.|++.|+++.++|+-.........+++|+.... ..++...+.... .-
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f-----~~i~~~~~~~~~----------------Kp 134 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF-----DEIISSDDVGSR----------------KP 134 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC-----SEEEEGGGSSSS----------------TT
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc-----ccccccchhhhh----------------hh
Confidence 467899999999999999999999999999999999999987421 122222222211 11
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG 781 (825)
.|+-=..+.+.+.-..+.+.++||...|..+-++|++-
T Consensus 135 ~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 135 DPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp SHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 11211233333433456799999999999999998753
No 124
>PRK06769 hypothetical protein; Validated
Probab=95.17 E-value=0.083 Score=52.49 Aligned_cols=124 Identities=13% Similarity=0.019 Sum_probs=67.7
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCe
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVF--------TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKI 737 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~--------tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~ 737 (825)
+-||++++++.|++.|+++.++|+.... .+...-+..|+..-.. .....+.+..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~----~~~~~~~~~~-------------- 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYL----CPHKHGDGCE-------------- 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEE----CcCCCCCCCC--------------
Confidence 6799999999999999999999987631 1222333455432000 0000000000
Q ss_pred eEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCc--hH--------HHHHhcCeeeccCCchH
Q 003371 738 RVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQG--TE--------VAKESSDIVILDDDFTS 807 (825)
Q Consensus 738 ~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~g--t~--------vAk~aaDivlldd~f~s 807 (825)
..+-.|+-=..+.+.+.-.-+-+.|+||..+|..|-+.|++-...-..| .+ ..+..+|.++- ++..
T Consensus 91 --~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~--~~~e 166 (173)
T PRK06769 91 --CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAE--NFED 166 (173)
T ss_pred --CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhh--CHHH
Confidence 0111222212333333322356899999999999999998755432222 22 11234666653 5666
Q ss_pred HHHH
Q 003371 808 VATV 811 (825)
Q Consensus 808 Iv~~ 811 (825)
+...
T Consensus 167 l~~~ 170 (173)
T PRK06769 167 AVNW 170 (173)
T ss_pred HHHH
Confidence 6554
No 125
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.11 E-value=0.058 Score=55.57 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=75.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+++||+.+.++.|++. +++.++|+-....+..+.++.|+.... ..++.+.+. ....
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----d~i~~~~~~------------------~~~K 152 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF-----DDIFVSEDA------------------GIQK 152 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc-----CEEEEcCcc------------------CCCC
Confidence 5789999999999999 999999999999999999999986531 112221111 1112
Q ss_pred HHHHHHHHHHHHhC----CCEEEEEcCCc-cCHHHhhhCCc---cEecCCCchHHHHHhcCeeeccCCchHHHHH
Q 003371 745 PFDKLLMVQCLKKK----GHVVAVTGDGT-NDAPALKEADV---GLSMGIQGTEVAKESSDIVILDDDFTSVATV 811 (825)
Q Consensus 745 P~dK~~lV~~Lq~~----g~vVa~~GDG~-NDapALk~AdV---Giamg~~gt~vAk~aaDivlldd~f~sIv~~ 811 (825)
|... .+-+.+++. -+.+.|+||.. +|..+-+.+++ ++..|. .++.....+|.++- +++.|..+
T Consensus 153 P~~~-~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~-~~~~~~~~~~~~~~--~~~el~~~ 223 (224)
T TIGR02254 153 PDKE-IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDM-HPNPDDIIPTYEIR--SLEELYEI 223 (224)
T ss_pred CCHH-HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCC-CCCCCCCCCceEEC--CHHHHHhh
Confidence 3222 122333333 34588999998 89999999986 333331 22112234565553 56655543
No 126
>PRK09449 dUMP phosphatase; Provisional
Probab=94.91 E-value=0.11 Score=53.79 Aligned_cols=122 Identities=16% Similarity=0.168 Sum_probs=77.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|+ +|+++.++|......+...-+..|+.... ..++.+.+.. ...
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~v~~~~~~~------------------~~K 150 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF-----DLLVISEQVG------------------VAK 150 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc-----CEEEEECccC------------------CCC
Confidence 46899999999999 68999999999988888888888886421 1122221110 123
Q ss_pred HHHHHHHHHHHHhCC----CEEEEEcCCc-cCHHHhhhCCccE-ecCCCchH-HHHHhcCeeeccCCchHHHHHHH
Q 003371 745 PFDKLLMVQCLKKKG----HVVAVTGDGT-NDAPALKEADVGL-SMGIQGTE-VAKESSDIVILDDDFTSVATVLS 813 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g----~vVa~~GDG~-NDapALk~AdVGi-amg~~gt~-vAk~aaDivlldd~f~sIv~~i~ 813 (825)
|. ..-+-..+++.| +.+.|+||.. +|..+-+.|++-. .....+.. .....+|.++. ++..+..+++
T Consensus 151 P~-p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el~~~l~ 223 (224)
T PRK09449 151 PD-VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSELEQLLC 223 (224)
T ss_pred CC-HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHHHHHHh
Confidence 32 223334444443 4689999998 7999999999753 32211211 11124677764 6777776553
No 127
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=94.77 E-value=0.24 Score=47.94 Aligned_cols=107 Identities=16% Similarity=0.243 Sum_probs=78.1
Q ss_pred HHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHH
Q 003371 614 IHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVF 693 (825)
Q Consensus 614 i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~ 693 (825)
.+.+...|.|.+.+-. + -|+++.= ....-|++++=+..++.+|+++.++|--+..
T Consensus 20 ~~~L~~~Gikgvi~Dl---D--------------------NTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~ 74 (175)
T COG2179 20 PDILKAHGIKGVILDL---D--------------------NTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKES 74 (175)
T ss_pred HHHHHHcCCcEEEEec---c--------------------Cceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHH
Confidence 4567889999887643 1 1333322 2345688999999999999999999999999
Q ss_pred HHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhC---CCEEEEEcCCc-
Q 003371 694 TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKK---GHVVAVTGDGT- 769 (825)
Q Consensus 694 tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~---g~vVa~~GDG~- 769 (825)
.+..+|..+|+.- ++--..|.-+ .+-++|++. -+.|+|+||-.
T Consensus 75 RV~~~~~~l~v~f--------------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~ 121 (175)
T COG2179 75 RVARAAEKLGVPF--------------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLF 121 (175)
T ss_pred HHHhhhhhcCCce--------------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhh
Confidence 9999999999964 3333455554 677888876 46799999974
Q ss_pred cCHHHhhhC
Q 003371 770 NDAPALKEA 778 (825)
Q Consensus 770 NDapALk~A 778 (825)
-|.-+=+.|
T Consensus 122 TDVlggnr~ 130 (175)
T COG2179 122 TDVLGGNRA 130 (175)
T ss_pred hhhhccccc
Confidence 476655544
No 128
>PLN02940 riboflavin kinase
Probab=94.74 E-value=0.099 Score=58.88 Aligned_cols=118 Identities=18% Similarity=0.151 Sum_probs=75.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIAT-ECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~-~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+... ...++.+.+. .+.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~-----Fd~ii~~d~v------------------~~~ 149 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES-----FSVIVGGDEV------------------EKG 149 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh-----CCEEEehhhc------------------CCC
Confidence 467999999999999999999999999888877665 6787542 1223332221 122
Q ss_pred CHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccEecCCCc--hHHHHHhcCeeeccCCchHH
Q 003371 744 SPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLSMGIQG--TEVAKESSDIVILDDDFTSV 808 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGiamg~~g--t~vAk~aaDivlldd~f~sI 808 (825)
.|. ...+.+.+++. .+.+.|+||+.+|..|-+.|++....=..+ .+.....+|.++- ++..+
T Consensus 150 KP~-p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~--sl~el 216 (382)
T PLN02940 150 KPS-PDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVIN--SLLDL 216 (382)
T ss_pred CCC-HHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeC--CHhHc
Confidence 331 12333444443 466889999999999999999763221122 2333345677654 45544
No 129
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.61 E-value=0.34 Score=50.91 Aligned_cols=93 Identities=13% Similarity=0.203 Sum_probs=60.2
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHcCCcc-cccccccceeeechhhhcCCHHHHHhhc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAK--AIATECGILR-LDQQVEKGEVVEGVEFRNYTDEERIQKV 734 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~--aIA~~~GI~~-~~~~~~~~~vi~G~~~~~~~~~~~~~~~ 734 (825)
|.+.-...+-|+++++++.|+++|+++.++|.-....+. ...+++|+.. .. ..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-----~~------------------- 72 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-----EM------------------- 72 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-----ce-------------------
Confidence 455556778899999999999999999999996554444 5667888854 21 11
Q ss_pred cCeeEEEecCHHHHHHHHHHHHh---CCCEEEEEcCCccCHHHhhhCC
Q 003371 735 DKIRVMARSSPFDKLLMVQCLKK---KGHVVAVTGDGTNDAPALKEAD 779 (825)
Q Consensus 735 ~~~~V~ar~sP~dK~~lV~~Lq~---~g~vVa~~GDG~NDapALk~Ad 779 (825)
|+... .....-+.+.+++ .+..+.++||+.+|...+..++
T Consensus 73 ----Ii~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 73 ----IISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ----EEccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 11110 1111222233333 2466999999999998886543
No 130
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=94.58 E-value=0.13 Score=55.58 Aligned_cols=121 Identities=19% Similarity=0.176 Sum_probs=73.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|+-+......+-+..++..... ...++.+.+. .+..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~~------------------~~~K 202 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQ---GLDVFAGDDV------------------PKKK 202 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccC---ceEEEecccc------------------CCCC
Confidence 578999999999999999999999998888877766553321100 0011122211 1112
Q ss_pred HHHH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHH--HHHhcCeeeccCCchHH
Q 003371 745 PFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEV--AKESSDIVILDDDFTSV 808 (825)
Q Consensus 745 P~dK--~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~v--Ak~aaDivlldd~f~sI 808 (825)
|.-. ..+.+.+.-....+.|+||+.+|..|-++|++....-..|..- ....+|+++- ++..+
T Consensus 203 P~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~--~~~~l 268 (286)
T PLN02779 203 PDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD--CLGDV 268 (286)
T ss_pred CCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC--Chhhc
Confidence 2211 2223333323456899999999999999999765543233211 1134788763 45444
No 131
>PLN02580 trehalose-phosphatase
Probab=94.57 E-value=0.44 Score=53.17 Aligned_cols=66 Identities=21% Similarity=0.262 Sum_probs=45.7
Q ss_pred ecCHH---HHHHHHHHHHhC-C-----C-EEEEEcCCccCHHHhhh-----CCccEecCCCchHHHHHhcCeeeccCCch
Q 003371 742 RSSPF---DKLLMVQCLKKK-G-----H-VVAVTGDGTNDAPALKE-----ADVGLSMGIQGTEVAKESSDIVILDDDFT 806 (825)
Q Consensus 742 r~sP~---dK~~lV~~Lq~~-g-----~-vVa~~GDG~NDapALk~-----AdVGiamg~~gt~vAk~aaDivlldd~f~ 806 (825)
...|. +|..-|+.|.+. | . .+.++||+.||-.|++. +++||+|| +|.. .-.|++-|- +..
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~--~t~A~y~L~--dp~ 367 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPK--ESNAFYSLR--DPS 367 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCC--CccceEEcC--CHH
Confidence 44553 899888888764 2 1 25899999999999996 68999999 4433 124677665 455
Q ss_pred HHHHHH
Q 003371 807 SVATVL 812 (825)
Q Consensus 807 sIv~~i 812 (825)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 555444
No 132
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=94.55 E-value=0.11 Score=51.35 Aligned_cols=83 Identities=20% Similarity=0.237 Sum_probs=61.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDN-VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~-~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.+-|+++++++.|++.|+++.++|+-+ ...+..+++.+|+... +...
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~--------------------------------~~~~ 90 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL--------------------------------PHAV 90 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE--------------------------------cCCC
Confidence 577999999999999999999999988 6778888888887421 1112
Q ss_pred CHHHHHHHHHHHHhC---CCEEEEEcCCc-cCHHHhhhCCc
Q 003371 744 SPFDKLLMVQCLKKK---GHVVAVTGDGT-NDAPALKEADV 780 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~---g~vVa~~GDG~-NDapALk~AdV 780 (825)
.|.-. .+-..+++. .+.+.|+||.. .|..+-+.|++
T Consensus 91 KP~p~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 91 KPPGC-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred CCChH-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCC
Confidence 33221 233344443 35599999998 79999999986
No 133
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=94.52 E-value=0.095 Score=54.40 Aligned_cols=94 Identities=11% Similarity=0.030 Sum_probs=65.8
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+.++.|++.|+++.++|.-+...+...-+..|+.... ..++.+.++ .+..
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~iv~s~~~------------------~~~K 149 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL-----DLLLSTHTF------------------GYPK 149 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC-----CEEEEeeeC------------------CCCC
Confidence 57899999999999999999999999999888888888886521 112222211 1223
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccE
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGi 782 (825)
|. -.-+...+++. .+.+.|+||..+|..|-+.|++..
T Consensus 150 P~-p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 150 ED-QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred CC-HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 32 11222333333 345899999999999999999863
No 134
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.95 E-value=0.25 Score=52.52 Aligned_cols=87 Identities=16% Similarity=0.136 Sum_probs=60.4
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeE
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVF---TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~---tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V 739 (825)
..++-||+.+.++.+++.|+++.++|+-... .+...-+..|+..... .. +
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~---d~------------------------l 168 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE---EH------------------------L 168 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc---ce------------------------E
Confidence 4567799999999999999999999997643 3445556788854210 01 3
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhh
Q 003371 740 MARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALK 776 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk 776 (825)
+.|-....|..-.+.+.+.-.+|+++||-.+|.....
T Consensus 169 llr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 169 LLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred EeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 3332223455556666666678999999999986543
No 135
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.62 E-value=0.7 Score=46.65 Aligned_cols=38 Identities=11% Similarity=0.131 Sum_probs=33.3
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 003371 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~ 705 (825)
..+.+.+..++++|+.|+.+|.-....-...-+++|+.
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 34678899999999999999998888888888889886
No 136
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.62 E-value=0.2 Score=50.79 Aligned_cols=91 Identities=18% Similarity=0.211 Sum_probs=59.3
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++-||+.++++.|++.|+++.++|+-... ...+.+.+|+.... ..++...+.. ...
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~f-----d~i~~s~~~~------------------~~K 160 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYF-----DFVVTSYEVG------------------AEK 160 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhc-----ceEEeecccC------------------CCC
Confidence 56799999999999999999999976543 46777788875421 1121111111 112
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCc-cCHHHhhhCCc
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGT-NDAPALKEADV 780 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~-NDapALk~AdV 780 (825)
|. ...+-..+++. ...+.|+||+. +|..+-++|++
T Consensus 161 P~-~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 161 PD-PKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CC-HHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 32 12333344443 35689999997 89998888864
No 137
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=93.48 E-value=0.23 Score=47.91 Aligned_cols=89 Identities=17% Similarity=0.247 Sum_probs=57.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+..||+.+.++.|++.|+++.++|+-....+....+.. +.... ..++...+ + . ..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f-----~~i~~~~~-----------------~-~-~K 118 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF-----DLILGSDE-----------------F-G-AK 118 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC-----cEEEecCC-----------------C-C-CC
Confidence 34589999999999999999999999999998888775 33211 11111000 1 1 12
Q ss_pred HHHHHHHHHHHHhCCC--EEEEEcCCccCHHHhhhCC
Q 003371 745 PFDKLLMVQCLKKKGH--VVAVTGDGTNDAPALKEAD 779 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~--vVa~~GDG~NDapALk~Ad 779 (825)
|. ...+.+.+++.|- .+.++||..+|..|-+.|+
T Consensus 119 p~-~~~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 119 PE-PEIFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred cC-HHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 31 2223333333322 6899999999999887763
No 138
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=93.24 E-value=0.13 Score=53.52 Aligned_cols=110 Identities=23% Similarity=0.325 Sum_probs=71.2
Q ss_pred CCcccHHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeech-hhhcCCHHHHHhhccC-eeEE
Q 003371 665 PCRPGVQKAVEAC--QSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGV-EFRNYTDEERIQKVDK-IRVM 740 (825)
Q Consensus 665 plR~~v~~aI~~l--~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~-~~~~~~~~~~~~~~~~-~~V~ 740 (825)
|+.|+.+++++.| ++.|+.++++|--|..--..|=+.-|+...... +.+-+ .|.. . -...+.|. ..-+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~-----I~TNpa~~~~-~--G~l~v~pyh~h~C 142 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE-----IFTNPACFDA-D--GRLRVRPYHSHGC 142 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce-----EEeCCceecC-C--ceEEEeCccCCCC
Confidence 6779999999999 568999999999999999999999998643211 11111 0100 0 00000000 0123
Q ss_pred EecCH-HHHHHHHHHHHhC----C---CEEEEEcCCccCHH-Hh--hhCCccE
Q 003371 741 ARSSP-FDKLLMVQCLKKK----G---HVVAVTGDGTNDAP-AL--KEADVGL 782 (825)
Q Consensus 741 ar~sP-~dK~~lV~~Lq~~----g---~vVa~~GDG~NDap-AL--k~AdVGi 782 (825)
.++.| .=|..+++.+++. | ..|.++|||.||-. ++ +.+|+-+
T Consensus 143 ~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 143 SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 35555 4799999888765 4 78999999999964 43 3455544
No 139
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.20 E-value=0.23 Score=54.98 Aligned_cols=98 Identities=21% Similarity=0.153 Sum_probs=59.7
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCcccccccccceeeechhhhcCCHH
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGD---------------NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDE 728 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD---------------~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~ 728 (825)
=++.|++.++++.|+++|+++.++|.- ....+..+.+..|+.-. ...+.. .+. .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd------~i~i~~-~~~--sd- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD------EVLICP-HFP--ED- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee------eEEEeC-CcC--cc-
Confidence 367899999999999999999999982 23345566777776310 111110 000 00
Q ss_pred HHHhhccCeeEEEecCHHHHHHHHHHH-HhC---CCEEEEEcCCccCHHHhhhCCccEe
Q 003371 729 ERIQKVDKIRVMARSSPFDKLLMVQCL-KKK---GHVVAVTGDGTNDAPALKEADVGLS 783 (825)
Q Consensus 729 ~~~~~~~~~~V~ar~sP~dK~~lV~~L-q~~---g~vVa~~GDG~NDapALk~AdVGia 783 (825)
...+| .|. -.++..+ ++. ...+.|+||+.+|..+-+.|++-..
T Consensus 99 ---------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 ---------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred ---------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00011 232 2233332 222 3678999999999999999987643
No 140
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.13 E-value=0.26 Score=47.42 Aligned_cols=96 Identities=20% Similarity=0.227 Sum_probs=59.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCcccccccccceeeechhhhcCCHHH
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNV---------------FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEE 729 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~---------------~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~ 729 (825)
++.||+.++++.|++.|+++.++|.... ..+..+.+.+|+.... ......+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~----- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-------VLFCPHHPA----- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-------EEECCCCCC-----
Confidence 4689999999999999999999998762 4556677788875210 000000000
Q ss_pred HHhhccCeeEEEecCHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc
Q 003371 730 RIQKVDKIRVMARSSPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 730 ~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVG 781 (825)
.......|.-+ .+-..+++. -+-+.|+||...|..+-+.|++-
T Consensus 95 --------~~~~~~KP~~~-~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 95 --------DNCSCRKPKPG-LILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred --------CCCCCCCCCHH-HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00000133221 233333333 35689999999999999888764
No 141
>PLN02811 hydrolase
Probab=93.07 E-value=0.25 Score=51.00 Aligned_cols=95 Identities=20% Similarity=0.270 Sum_probs=58.2
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHcCCcccccccccceeeech--hhhcCCHHHHHhhccCeeEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA-IATECGILRLDQQVEKGEVVEGV--EFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~a-IA~~~GI~~~~~~~~~~~vi~G~--~~~~~~~~~~~~~~~~~~V~ 740 (825)
-++.||+.+.++.|++.|+++.++||-....... ..+..|+... ...++.+. +.
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~-----f~~i~~~~~~~~------------------ 133 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL-----MHHVVTGDDPEV------------------ 133 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh-----CCEEEECChhhc------------------
Confidence 3578999999999999999999999987654432 2222233221 11122221 11
Q ss_pred EecCHHHHHHHHHHHHhC------CCEEEEEcCCccCHHHhhhCCccE
Q 003371 741 ARSSPFDKLLMVQCLKKK------GHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 741 ar~sP~dK~~lV~~Lq~~------g~vVa~~GDG~NDapALk~AdVGi 782 (825)
.+..|.- ..+...+++. .+-+.|+||...|+.|-+.|++-.
T Consensus 134 ~~~KP~p-~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 134 KQGKPAP-DIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred cCCCCCc-HHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 1112221 1233333333 356999999999999999998754
No 142
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=92.83 E-value=0.45 Score=47.31 Aligned_cols=27 Identities=19% Similarity=0.281 Sum_probs=24.3
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCH
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNV 692 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~ 692 (825)
+.||+.++++.|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 469999999999999999999997663
No 143
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.83 E-value=0.4 Score=61.04 Aligned_cols=132 Identities=14% Similarity=0.263 Sum_probs=85.5
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc-ccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL-RLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~-~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
+.||+.+.++.|+++|+++.++|+-....+..+-+..|+. .. ...++.+.++ .+..
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~-----Fd~iv~~~~~------------------~~~K 218 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM-----FDAIVSADAF------------------ENLK 218 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH-----CCEEEECccc------------------ccCC
Confidence 5699999999999999999999999999999998999985 21 1123333222 1223
Q ss_pred HHHH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc---cEecCCCchHHHHHhcCeeeccCCchH--HHHHHHHhHH
Q 003371 745 PFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEADV---GLSMGIQGTEVAKESSDIVILDDDFTS--VATVLSPGDQ 817 (825)
Q Consensus 745 P~dK--~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV---Giamg~~gt~vAk~aaDivlldd~f~s--Iv~~i~~gR~ 817 (825)
|... ....+.+.-..+.+.|+||..+|+.|-+.|++ ++.-+....+.....+|+++- ++.. +..++.-|-.
T Consensus 219 P~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~--~l~el~~~~~~~~~~~ 296 (1057)
T PLN02919 219 PAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRK--DIGNISLSDILTGGSD 296 (1057)
T ss_pred CCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC--ChHHCCHHHHHhcCCC
Confidence 3222 22233333234568899999999999999987 232232223444556777775 5554 5555555555
Q ss_pred hhccc
Q 003371 818 LHSGC 822 (825)
Q Consensus 818 i~~ni 822 (825)
.++|.
T Consensus 297 ~~~~~ 301 (1057)
T PLN02919 297 ATPNV 301 (1057)
T ss_pred CCCCc
Confidence 55554
No 144
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.82 E-value=0.11 Score=50.20 Aligned_cols=92 Identities=15% Similarity=0.016 Sum_probs=64.7
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
-++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+.... ...++.+.+.. +.
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~----f~~i~~~~d~~------------------~~ 100 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYF----GYRRLFRDECV------------------FV 100 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCE----eeeEEECcccc------------------cc
Confidence 357999999999999 57999999999999999999999874310 11223222221 11
Q ss_pred CHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccE
Q 003371 744 SPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGi 782 (825)
.|. +.+.++.. -+.+.|+||..+|..|-++|.|-|
T Consensus 101 KP~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 101 KGK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred CCe----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 222 44444433 467899999999999888885554
No 145
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=92.49 E-value=0.65 Score=57.52 Aligned_cols=38 Identities=5% Similarity=0.042 Sum_probs=32.6
Q ss_pred CCcccHHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHHc
Q 003371 665 PCRPGVQKAVEAC-QSAGVEIKMITGDNVFTAKAIATEC 702 (825)
Q Consensus 665 plR~~v~~aI~~l-~~aGI~V~mvTGD~~~tA~aIA~~~ 702 (825)
.+-|++.+++++| ++.|+.|.++||....+....-..+
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 5668999999996 7789999999999999998877543
No 146
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=91.99 E-value=0.45 Score=44.70 Aligned_cols=39 Identities=5% Similarity=0.075 Sum_probs=35.0
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGD-NVFTAKAIATECG 703 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD-~~~tA~aIA~~~G 703 (825)
++.||+.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777777776
No 147
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=91.91 E-value=0.49 Score=42.48 Aligned_cols=49 Identities=20% Similarity=0.305 Sum_probs=36.9
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCcc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA---TECGILR 706 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA---~~~GI~~ 706 (825)
|++..-+.+=||+.++|+.|+++|++++++|-....+...++ +.+||..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 556667778899999999999999999999998866655555 5577754
No 148
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=91.83 E-value=0.84 Score=47.27 Aligned_cols=89 Identities=18% Similarity=0.180 Sum_probs=56.6
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeE
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAK---AIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRV 739 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~---aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V 739 (825)
+-|.-|++.++++.+++.|++|+++||....... .--++.|+..- ..+++-+..-.
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-----~~LiLR~~~d~---------------- 176 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-----KHLILRGLEDS---------------- 176 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-----CeeeecCCCCC----------------
Confidence 4588899999999999999999999999976532 33345676431 11222211000
Q ss_pred EEecCHHHHHHHHHHHHhCC-CEEEEEcCCccCHH
Q 003371 740 MARSSPFDKLLMVQCLKKKG-HVVAVTGDGTNDAP 773 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~~g-~vVa~~GDG~NDap 773 (825)
....-.-|...-+.+.+.| .+|+++||-.+|..
T Consensus 177 -~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 177 -NKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred -CchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 0001112666666676665 57788999999863
No 149
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=91.75 E-value=0.55 Score=46.20 Aligned_cols=80 Identities=18% Similarity=0.144 Sum_probs=61.8
Q ss_pred cCCCcccHHHHHHHHHhCCC--eEEEEcCC-------CHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhh
Q 003371 663 KDPCRPGVQKAVEACQSAGV--EIKMITGD-------NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQK 733 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI--~V~mvTGD-------~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~ 733 (825)
++.+-|+..+.+++|++.+. +|.++|-- +...|.++++.+||.--
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 57788999999999999987 49999986 48899999999998520
Q ss_pred ccCeeEEEecCHHHHHHHHHHHHhC-----CCEEEEEcCC-ccCHH
Q 003371 734 VDKIRVMARSSPFDKLLMVQCLKKK-----GHVVAVTGDG-TNDAP 773 (825)
Q Consensus 734 ~~~~~V~ar~sP~dK~~lV~~Lq~~-----g~vVa~~GDG-~NDap 773 (825)
.+....|.-...+.+.++.+ -+-++|+||- .-|.-
T Consensus 111 -----~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 111 -----RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred -----EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 13335786667888888765 5569999996 23444
No 150
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=91.24 E-value=0.61 Score=48.22 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=63.1
Q ss_pred ccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC---CcccccccccceeeechhhhcCCHHHHHhhccCee
Q 003371 662 IKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECG---ILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIR 738 (825)
Q Consensus 662 i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~G---I~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 738 (825)
++-++.||+.++++.|+++|+++.++|..+....+.+-+..+ +... ++ ..+. ..
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~---------f~-------------~~fd-~~ 148 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY---------FS-------------GYFD-TT 148 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh---------cc-------------eEEE-eC
Confidence 345789999999999999999999999998887777766653 2110 00 0000 00
Q ss_pred EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 003371 739 VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi 782 (825)
+...-.|+-=..+.+.+.-..+.+.|+||...|+.|-++|++-.
T Consensus 149 ~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 149 VGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred cccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 11111222112333333222356899999999999999998854
No 151
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=91.13 E-value=0.35 Score=49.81 Aligned_cols=127 Identities=12% Similarity=0.093 Sum_probs=77.2
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||++++++.| ++++.++|+.....+...=+..|+..... ..++.+.+.. +..
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~----~~v~~~~~~~------------------~~K 142 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP----DKLFSGYDIQ------------------RWK 142 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc----ceEeeHHhcC------------------CCC
Confidence 4568999999998 49999999999888888878888865310 1233333221 112
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccEecCC--CchHHHHHhcCeeeccCCchHHHHHHHHhHHhh
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGLSMGI--QGTEVAKESSDIVILDDDFTSVATVLSPGDQLH 819 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGiamg~--~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~ 819 (825)
|.- ..+...+++. .+.++|+||..+|..+=++|++....-. ...+.-+..++.++ +++..++..+..+-+.+
T Consensus 143 P~p-~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~ 219 (221)
T PRK10563 143 PDP-ALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTF--TDLAQLPELWKARGWDI 219 (221)
T ss_pred CCh-HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHH--HHHHHHHHHHHHhcccc
Confidence 211 1222233333 3558999999999999999997764321 12222233344443 36777777666554443
No 152
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=90.78 E-value=0.26 Score=51.92 Aligned_cols=70 Identities=20% Similarity=0.197 Sum_probs=51.3
Q ss_pred EEEecCHHHHHHHHHHHHhC----CCEEEEEcCCccCHHHhhhC--------CccEecCCCchHHHHHhcCeeeccCCch
Q 003371 739 VMARSSPFDKLLMVQCLKKK----GHVVAVTGDGTNDAPALKEA--------DVGLSMGIQGTEVAKESSDIVILDDDFT 806 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~----g~vVa~~GDG~NDapALk~A--------dVGiamg~~gt~vAk~aaDivlldd~f~ 806 (825)
+-.+..+.+|...++.+.+. ...++++||+.||.+|++.+ ..|++|+ .|. .+..|++++- +..
T Consensus 159 ~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~--~~~ 233 (244)
T TIGR00685 159 VELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLT--GPQ 233 (244)
T ss_pred EEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCC--CHH
Confidence 34455677898888887654 34689999999999999999 4788885 332 3556888776 677
Q ss_pred HHHHHHH
Q 003371 807 SVATVLS 813 (825)
Q Consensus 807 sIv~~i~ 813 (825)
.+...+.
T Consensus 234 ~v~~~L~ 240 (244)
T TIGR00685 234 QVLEFLG 240 (244)
T ss_pred HHHHHHH
Confidence 7766654
No 153
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=90.70 E-value=0.55 Score=46.08 Aligned_cols=98 Identities=21% Similarity=0.157 Sum_probs=58.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHH
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGD---------------NVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEE 729 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD---------------~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~ 729 (825)
++-||+.+++++|++.|+++.++|-- ....+..+-++.|+.- ...++ +..+..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f------d~ii~-~~~~~~----- 96 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF------DDVLI-CPHFPD----- 96 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce------eEEEE-CCCCCC-----
Confidence 35699999999999999999999974 2345666777777741 01111 100000
Q ss_pred HHhhccCeeEEEecCHHHHHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCccEe
Q 003371 730 RIQKVDKIRVMARSSPFDKLLMVQCLKKKG---HVVAVTGDGTNDAPALKEADVGLS 783 (825)
Q Consensus 730 ~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g---~vVa~~GDG~NDapALk~AdVGia 783 (825)
-.+. ...|... .+-..+++.| ..+.|+||+.+|..+-+.|.+-..
T Consensus 97 -------~~~~-~~KP~~~-~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 97 -------DNCD-CRKPKIK-LLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------CCCC-CCCCCHH-HHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0000 1123221 1122233332 458899999999999999987643
No 154
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=90.52 E-value=0.37 Score=49.20 Aligned_cols=94 Identities=16% Similarity=0.145 Sum_probs=55.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFT--AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~t--A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a 741 (825)
-++.|++.+.++.|++.|+++.++|...... ........|+.... ..++...+ + .
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-----d~v~~s~~-----------------~-~ 149 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-----DAVVESCL-----------------E-G 149 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-----CEEEEeee-----------------c-C
Confidence 3578999999999999999999999875433 22223334443211 01111100 0 0
Q ss_pred ecCHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc
Q 003371 742 RSSPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVG 781 (825)
...|.-. .+-..+++. ...++|+||...|..+-++|++-
T Consensus 150 ~~KP~p~-~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 150 LRKPDPR-IYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CCCCCHH-HHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 1123322 222333333 35578889999999999999874
No 155
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=89.86 E-value=0.96 Score=44.59 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=32.0
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHcCCc
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNV------------FTAKAIATECGIL 705 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~------------~tA~aIA~~~GI~ 705 (825)
+-||+.++++.|+++|+++.++|.-.. ..+..+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 349999999999999999999997543 2456677888874
No 156
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=89.36 E-value=1 Score=49.40 Aligned_cols=90 Identities=11% Similarity=0.001 Sum_probs=67.1
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCcccccccccceeeechhhhcCCHHHHHhhccCeeEE
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE----CGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVM 740 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~----~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ 740 (825)
++.+++.++++.|++.|+.+.++|.-+...|..+-++ +|+.... ..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f------------------------------~~ 80 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF------------------------------DA 80 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe------------------------------eE
Confidence 4579999999999999999999999999999999988 7775421 01
Q ss_pred EecCHHHHHHHHHHH-HhC---CCEEEEEcCCccCHHHhhhCCccEec
Q 003371 741 ARSSPFDKLLMVQCL-KKK---GHVVAVTGDGTNDAPALKEADVGLSM 784 (825)
Q Consensus 741 ar~sP~dK~~lV~~L-q~~---g~vVa~~GDG~NDapALk~AdVGiam 784 (825)
....+..|...++.+ ++. -.-++|+||...|..+.+.+...+.+
T Consensus 81 ~~~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 81 RSINWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred EEEecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 112233344444433 333 36789999999999999998887644
No 157
>PLN03017 trehalose-phosphatase
Probab=89.18 E-value=7.2 Score=43.34 Aligned_cols=46 Identities=17% Similarity=0.117 Sum_probs=36.9
Q ss_pred CeEEeeeecccC--CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 003371 653 GLTLLGIVGIKD--PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA 699 (825)
Q Consensus 653 ~l~llG~v~i~D--plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA 699 (825)
|.||+-++.-.| .+-++.+++|++|. .|+.|.++||........+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 456665554333 47799999999999 78999999999999999884
No 158
>PLN02645 phosphoglycolate phosphatase
Probab=88.91 E-value=0.75 Score=50.28 Aligned_cols=48 Identities=17% Similarity=0.292 Sum_probs=39.1
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA---TECGIL 705 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA---~~~GI~ 705 (825)
|++.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444444566699999999999999999999999988877777 567764
No 159
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=87.14 E-value=1.3 Score=44.73 Aligned_cols=94 Identities=11% Similarity=0.144 Sum_probs=56.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE-CGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~-~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
++.||+.++++.|++.|+++.++|.-+.......-.. .|+... ...++...++ ...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-----fd~v~~s~~~------------------~~~ 140 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-----ADHIYLSQDL------------------GMR 140 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-----cCEEEEeccc------------------CCC
Confidence 4789999999999999999999999776654433222 233221 0111111111 111
Q ss_pred CHHHHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCccE
Q 003371 744 SPFDKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVGi 782 (825)
.|. ..-+-..+++. .+-+.++||...|..+-++|++-.
T Consensus 141 KP~-p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 141 KPE-ARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CCC-HHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 232 11222333333 355889999999999999987743
No 160
>PHA02597 30.2 hypothetical protein; Provisional
Probab=86.28 E-value=2.5 Score=42.61 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=55.6
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++.|++.+ +..++|.-+..+....-+.+|+...... ....+ +.++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~-~f~~i----------------------~~~~~~ 129 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPG-AFSEV----------------------LMCGHD 129 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCC-cccEE----------------------EEeccC
Confidence 46899999999999985 5666676544444445566666421100 00111 122222
Q ss_pred HHHHHHHHHHHHhCC-CEEEEEcCCccCHHHhhhC--CccE
Q 003371 745 PFDKLLMVQCLKKKG-HVVAVTGDGTNDAPALKEA--DVGL 782 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g-~vVa~~GDG~NDapALk~A--dVGi 782 (825)
...+..+...+++.| +.++|+||..+|..|-++| ++-.
T Consensus 130 ~~kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 130 ESKEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred cccHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 212223333444444 4577999999999999999 8853
No 161
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=84.66 E-value=2 Score=42.82 Aligned_cols=95 Identities=9% Similarity=-0.041 Sum_probs=60.5
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.+++++|+ .++.++|.-+...+..+.+..|+.... ..++.+.+.... .....
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-----d~i~~~~~~~~~--------------~~~~K 141 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-----DGIFCFDTANPD--------------YLLPK 141 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-----CeEEEeecccCc--------------cCCCC
Confidence 46799999999997 478999999999999999999985421 112222111100 00023
Q ss_pred HHHH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhCCcc
Q 003371 745 PFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 745 P~dK--~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVG 781 (825)
|... ..+++.+....+.+.|+||...|..+=++|++-
T Consensus 142 P~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 142 PSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred CCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 4222 222333333345688999999999998888654
No 162
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=83.38 E-value=3 Score=41.50 Aligned_cols=89 Identities=19% Similarity=0.219 Sum_probs=58.9
Q ss_pred cccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHH
Q 003371 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF 746 (825)
Q Consensus 667 R~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~ 746 (825)
-|+ .+.++.+++. +++.++||.....+..+-+..|+.... ..++.+.+.. +..|.
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f-----d~i~~~~~~~------------------~~KP~ 144 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF-----DAVVAADDVQ------------------HHKPA 144 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc-----eEEEehhhcc------------------CCCCC
Confidence 354 5889999865 899999999999999999999986521 2233322221 11222
Q ss_pred HHHHHHHHHHhC---CCEEEEEcCCccCHHHhhhCCcc
Q 003371 747 DKLLMVQCLKKK---GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 747 dK~~lV~~Lq~~---g~vVa~~GDG~NDapALk~AdVG 781 (825)
.. -+...+++. ...+.|+||..+|+.+-++|++-
T Consensus 145 p~-~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 145 PD-TFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred hH-HHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 21 122333333 34477899999999999999764
No 163
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=83.28 E-value=1.7 Score=44.09 Aligned_cols=114 Identities=22% Similarity=0.311 Sum_probs=71.2
Q ss_pred CCcccHHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCcccccc---------cccceeeechhhhcCCHHHHHhhc
Q 003371 665 PCRPGVQKAVEACQSAGV-EIKMITGDNVFTAKAIATECGILRLDQQ---------VEKGEVVEGVEFRNYTDEERIQKV 734 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI-~V~mvTGD~~~tA~aIA~~~GI~~~~~~---------~~~~~vi~G~~~~~~~~~~~~~~~ 734 (825)
|+-|+..++|+.+++.|- .++++|--|..--..+-+..||..-... ..+.+.+.- +
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~p-----y--------- 149 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRP-----Y--------- 149 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeec-----C---------
Confidence 667999999999999997 9999999999888888888887531100 000111100 0
Q ss_pred cCeeEEEecCHH-HHHHHHHHHHhC-------CCEEEEEcCCccC-HHHhhhCCccEecCCCchHHH
Q 003371 735 DKIRVMARSSPF-DKLLMVQCLKKK-------GHVVAVTGDGTND-APALKEADVGLSMGIQGTEVA 792 (825)
Q Consensus 735 ~~~~V~ar~sP~-dK~~lV~~Lq~~-------g~vVa~~GDG~ND-apALk~AdVGiamg~~gt~vA 792 (825)
..-.=+.||-|. =|..++..++.. -+.+..+|||.|| +|.++...--+||-..|=++=
T Consensus 150 H~~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~ 216 (256)
T KOG3120|consen 150 HTQHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLW 216 (256)
T ss_pred CCCCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchH
Confidence 000112333332 366666555433 2378899999999 466666665666655555543
No 164
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=81.66 E-value=14 Score=39.57 Aligned_cols=49 Identities=14% Similarity=0.247 Sum_probs=35.8
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHcCCcc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKA---IATECGILR 706 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~a---IA~~~GI~~ 706 (825)
|++.-.+.+=|++.++|+.|++.|++++.+|+....+... --+++|+..
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 3444456677899999999999999999999976443333 335578753
No 165
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=80.14 E-value=13 Score=36.22 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=69.0
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHc-----CCcccccccccceeee-chhhhcCCHHHHHhh
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA---TEC-----GILRLDQQVEKGEVVE-GVEFRNYTDEERIQK 733 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA---~~~-----GI~~~~~~~~~~~vi~-G~~~~~~~~~~~~~~ 733 (825)
+|-.++|+.+.++..++.|.++.-+|+...--|...- .+. ++.. +.+.++ ...+..+..
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~------Gpv~~sP~~l~~al~r------ 92 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD------GPVLLSPDSLFSALHR------ 92 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC------CCEEECCcchhhhhhc------
Confidence 3799999999999999999999999999865554332 222 3221 112221 111111111
Q ss_pred ccCeeEEEecCHHHHHHHHHHHHhC-----CCEEEEEcCCccCHHHhhhCCcc
Q 003371 734 VDKIRVMARSSPFDKLLMVQCLKKK-----GHVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 734 ~~~~~V~ar~sP~dK~~lV~~Lq~~-----g~vVa~~GDG~NDapALk~AdVG 781 (825)
.|..+-.-+.|....+.|+.. ...+|..|...+|+.|.++++|-
T Consensus 93 ----Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 ----EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ----cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 145555567898888888864 56778899999999999987553
No 166
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=77.71 E-value=2 Score=44.66 Aligned_cols=89 Identities=21% Similarity=0.242 Sum_probs=56.1
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCcccccccccceeeechhh-hcCCHHHHHhhccCeeE
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVF---TAKAIATECGILRLDQQVEKGEVVEGVEF-RNYTDEERIQKVDKIRV 739 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~---tA~aIA~~~GI~~~~~~~~~~~vi~G~~~-~~~~~~~~~~~~~~~~V 739 (825)
+|.=|++.+.++.+++.|++|+.|||.+.. ....--++.|+... ..+++.+..- +.
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-----~~l~lr~~~~~~~--------------- 173 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-----DHLILRPDKDPSK--------------- 173 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-----SCGEEEEESSTSS---------------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-----chhcccccccccc---------------
Confidence 456689999999999999999999997754 22233455665431 1122211110 00
Q ss_pred EEecCHHHHHHHHHHHHhCC-CEEEEEcCCccCHHH
Q 003371 740 MARSSPFDKLLMVQCLKKKG-HVVAVTGDGTNDAPA 774 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~~g-~vVa~~GDG~NDapA 774 (825)
.....-|...-+.+++.| ++|+++||-.+|...
T Consensus 174 --~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 174 --KSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred --ccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 001234778888888884 677889999999874
No 167
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=77.43 E-value=5 Score=42.98 Aligned_cols=41 Identities=10% Similarity=0.105 Sum_probs=38.5
Q ss_pred Cc-ccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc
Q 003371 666 CR-PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (825)
Q Consensus 666 lR-~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~ 706 (825)
+| |++.+++++|+++|+++.++|+-....+...-+++||..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999975
No 168
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=75.76 E-value=7.3 Score=38.82 Aligned_cols=97 Identities=25% Similarity=0.289 Sum_probs=63.4
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHH---HHHhhccCe--eEE
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDE---ERIQKVDKI--RVM 740 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~---~~~~~~~~~--~V~ 740 (825)
+.|++.+++..++++|.+++|+|- |-||... -.+++.|..+.+- .+.+.--++ ..+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg--------yf~~~~f~~~~~~m~~~l~~~gv~id~i~~ 92 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG--------YFTEADFDKLHNKMLKILASQGVKIDGILY 92 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc--------CccHHHHHHHHHHHHHHHHHcCCccceEEE
Confidence 359999999999999999999995 4566542 2344455443321 111111111 134
Q ss_pred EecCHHH--------HHHHHHHHHhCC---CEEEEEcCCccCHHHhhhCCcc
Q 003371 741 ARSSPFD--------KLLMVQCLKKKG---HVVAVTGDGTNDAPALKEADVG 781 (825)
Q Consensus 741 ar~sP~d--------K~~lV~~Lq~~g---~vVa~~GDG~NDapALk~AdVG 781 (825)
|.-.|++ ...+.+.+++.+ ....||||-..|..+-..|+++
T Consensus 93 Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 93 CPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 4444553 346677777765 6788999999999998888776
No 169
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=73.30 E-value=4.5 Score=42.88 Aligned_cols=48 Identities=25% Similarity=0.361 Sum_probs=37.2
Q ss_pred eeecccCC----CcccHHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCc
Q 003371 658 GIVGIKDP----CRPGVQKAVEACQSAGVEIKMITGDNVFT---AKAIATECGIL 705 (825)
Q Consensus 658 G~v~i~Dp----lR~~v~~aI~~l~~aGI~V~mvTGD~~~t---A~aIA~~~GI~ 705 (825)
|++.-.+. +=|++.++|+.|+++|++++++||.+..+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 78899999999999999999999977765 44555667874
No 170
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=71.17 E-value=7 Score=41.96 Aligned_cols=41 Identities=15% Similarity=0.092 Sum_probs=37.5
Q ss_pred Cc-ccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcc
Q 003371 666 CR-PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILR 706 (825)
Q Consensus 666 lR-~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~ 706 (825)
+| |++.+++++|+++|+++.++|+-+...+..+.+..|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 46 999999999999999999999888888899999999965
No 171
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=71.10 E-value=56 Score=40.41 Aligned_cols=233 Identities=16% Similarity=0.102 Sum_probs=112.4
Q ss_pred ccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----h-h
Q 003371 154 KGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSK----I-S 228 (825)
Q Consensus 154 ~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~----~-~ 228 (825)
+.|++.+++.+.-..++.-+++.++.-... ++.-. .+++.-.++.++.-.+..+.-++++++.. . .
T Consensus 28 ~~~~~~~~~~~~~lL~~aa~~s~~~~~~~~--------~~~i~-~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~R 98 (755)
T TIGR01647 28 LKFLGFFWNPLSWVMEAAAIIAIALENWVD--------FVIIL-GLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLR 98 (755)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHhhcchhh--------hhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE
Confidence 456666666665444443334444332221 12222 22333334555666666666666666522 1 1
Q ss_pred CCCeeEE----EeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCce
Q 003371 229 NNIKVEV----VREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSK 304 (825)
Q Consensus 229 ~~~~v~V----~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~ 304 (825)
+....+| +.-|....+...|.+|-|.+.++ |+-.=+|=-.+.|++.-|+-. +|. .+. .+..+.+|+-
T Consensus 99 dg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~-g~~~~VDeS~LTGES~PV~K~--~~~--~v~----aGT~v~~G~~ 169 (755)
T TIGR01647 99 DGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE-GDYIQVDQAALTGESLPVTKK--TGD--IAY----SGSTVKQGEA 169 (755)
T ss_pred CCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe-cCceEEEcccccCCccceEec--cCC--eee----ccCEEEccEE
Confidence 2222222 23588899999999999999886 443555766777777544432 121 111 3455666664
Q ss_pred eeeceEEEEEEEEcccchHHHHHhhccCCC-CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccc
Q 003371 305 VADGYAQMLVVSVGMNTAWGEMMSSISSDS-NERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKE 383 (825)
Q Consensus 305 v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~-~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~ 383 (825)
..-=...+-=+..|. +.+++....... .-+..+.+....+......+++++.++.+...-..| ..
T Consensus 170 ~~~V~~tG~~T~~g~---i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~---------- 235 (755)
T TIGR01647 170 EAVVTATGMNTFFGK---AAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF-RE---------- 235 (755)
T ss_pred EEEEEEcCCccHHHH---HHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-HH----------
Confidence 433222222333332 223333333222 222223333333333332322222222222111111 11
Q ss_pred ccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 003371 384 YNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKR 431 (825)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~ 431 (825)
.+...+..++..+-.+.|..+|+++.++.....++
T Consensus 236 -------------~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~ 270 (755)
T TIGR01647 236 -------------GLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKK 270 (755)
T ss_pred -------------HHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhC
Confidence 23334566777778888888888888887654443
No 172
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=71.05 E-value=2.7 Score=41.22 Aligned_cols=41 Identities=17% Similarity=0.004 Sum_probs=37.5
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~ 705 (825)
=..|||+.+.++.|.+. .++.+.|--....|..+...++..
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 35799999999999988 999999999999999999998864
No 173
>PTZ00445 p36-lilke protein; Provisional
Probab=71.02 E-value=8.6 Score=39.15 Aligned_cols=64 Identities=16% Similarity=0.293 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEee--eecccCC----------CcccHHHHH
Q 003371 607 RSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLG--IVGIKDP----------CRPGVQKAV 674 (825)
Q Consensus 607 ~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG--~v~i~Dp----------lR~~v~~aI 674 (825)
++......+.+...|.|++++-+ |.|+++ .=|--+| ++|+.+.-+
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~-----------------------DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~ 84 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDF-----------------------DLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILG 84 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecc-----------------------hhhhhhhhcccccCCCcchhhhhccCCHHHHHHH
Confidence 44556667778899999998754 223333 0012233 799999999
Q ss_pred HHHHhCCCeEEEEcCCCHH
Q 003371 675 EACQSAGVEIKMITGDNVF 693 (825)
Q Consensus 675 ~~l~~aGI~V~mvTGD~~~ 693 (825)
+.|+++||+|.++|=-...
T Consensus 85 ~~l~~~~I~v~VVTfSd~~ 103 (219)
T PTZ00445 85 KRLKNSNIKISVVTFSDKE 103 (219)
T ss_pred HHHHHCCCeEEEEEccchh
Confidence 9999999999999965443
No 174
>PRK10444 UMP phosphatase; Provisional
Probab=70.80 E-value=4.5 Score=42.70 Aligned_cols=48 Identities=17% Similarity=0.297 Sum_probs=41.4
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATEC---GIL 705 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~---GI~ 705 (825)
|++.-.+.+=|++.++|+.|+++|++++++|+....+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 555556778899999999999999999999999999988888875 663
No 175
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=70.57 E-value=11 Score=38.91 Aligned_cols=98 Identities=18% Similarity=0.202 Sum_probs=69.1
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
.++.||+.+.+++|++.|+.+...|+-....+..+....|+... ...++.+.+...- .-
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~-----f~~~v~~~dv~~~----------------KP 143 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY-----FDVIVTADDVARG----------------KP 143 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh-----cchhccHHHHhcC----------------CC
Confidence 47889999999999999999999999999999999999999864 2233333333211 12
Q ss_pred CHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccE
Q 003371 744 SPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGL 782 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGi 782 (825)
.|+-=+.-.+.|.-.-..+.++.|..|...|-++|+.-+
T Consensus 144 ~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 144 APDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred CCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 233223333333223455778899999999999987544
No 176
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=70.20 E-value=23 Score=37.62 Aligned_cols=89 Identities=19% Similarity=0.211 Sum_probs=53.2
Q ss_pred cCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCcccccccccceeeechh-hhcCCHHHHHhhccCee
Q 003371 663 KDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIA---TECGILRLDQQVEKGEVVEGVE-FRNYTDEERIQKVDKIR 738 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA---~~~GI~~~~~~~~~~~vi~G~~-~~~~~~~~~~~~~~~~~ 738 (825)
+.|.=|++.+..+.+++.|++|+.|||.....-.+.. ++.|+... ..+++-+.. -+
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-----~~LiLR~~~D~~--------------- 202 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-----EKLILKDPQDNS--------------- 202 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-----ceeeecCCCCCc---------------
Confidence 4677789999999999999999999999864322222 23566431 122221110 00
Q ss_pred EEEecCHHHHHHHHHHHHhCC-CEEEEEcCCccCHH
Q 003371 739 VMARSSPFDKLLMVQCLKKKG-HVVAVTGDGTNDAP 773 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~g-~vVa~~GDG~NDap 773 (825)
.....+-|...-+.+.+.| .+++.+||-.+|-.
T Consensus 203 --~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl~ 236 (275)
T TIGR01680 203 --AENAVEYKTAARAKLIQEGYNIVGIIGDQWNDLK 236 (275)
T ss_pred --cchhHHHHHHHHHHHHHcCceEEEEECCCHHhcc
Confidence 0011123444444444554 57788999999963
No 177
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=69.75 E-value=67 Score=40.88 Aligned_cols=257 Identities=16% Similarity=0.111 Sum_probs=116.7
Q ss_pred cHHHHHHHHhhhHHHHHHHHHHHHHhh-----hccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc--
Q 003371 155 GLLHFVLEAFKDTTILILLVCAALSLG-----FGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKL-SK-- 226 (825)
Q Consensus 155 s~~~~~~~~~~~~~~~il~v~a~lsl~-----~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l-~~-- 226 (825)
-|++-+++.+.-..++..+++.++.+. ..-...+|.++.+-.+.+++.+ ++.++.-+...++.++.++. .+
T Consensus 89 ~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~-~i~~~~e~~~~~~~~~l~~~~~~~~ 167 (941)
T TIGR01517 89 IVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVV-LVTAVNDYKKELQFRQLNREKSAQK 167 (941)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHhccCCCc
Confidence 455555555544444444444443321 0111122333444444444444 44444444444443444443 11
Q ss_pred --hhCCCeeEEE-----eCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCcee
Q 003371 227 --ISNNIKVEVV-----REARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFL 299 (825)
Q Consensus 227 --~~~~~~v~V~-----R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l 299 (825)
...+.+.+.+ .-|....+...|.+|.|.+.++ |+..=+|=-.+.|++.-++-. .|+...+. .+..+
T Consensus 168 ~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~-g~~l~VdES~LTGES~pv~K~--~~~~n~v~----~GT~v 240 (941)
T TIGR01517 168 IAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS-GLSLEIDESSITGESDPIKKG--APKDSFLL----SGTVV 240 (941)
T ss_pred eEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEE-cCcEEEEecccCCCCCccccc--CCCCceEE----eCCeE
Confidence 1122222222 3588999999999999999985 445557777777877544322 23332233 35566
Q ss_pred eeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 003371 300 FSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGEN 379 (825)
Q Consensus 300 ~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~ 379 (825)
.+|+-..-=...+.=+..|. +.+.+........-...+.+....+......+++++.++.++.++.....+.....
T Consensus 241 ~~G~~~~iV~~tG~~T~~gk---i~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~- 316 (941)
T TIGR01517 241 NEGSGRMLVTAVGVNSFGGK---LMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDT- 316 (941)
T ss_pred EeeEEEEEEEEeCCCcHHHH---HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc-
Confidence 66653332112222222221 11111111122222222333333333333333333333332222222211110000
Q ss_pred CcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 003371 380 GIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKR 431 (825)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~ 431 (825)
... ...+...+...+..++..+-.+.|..+++++..+....+++
T Consensus 317 ~~~--------~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~ 360 (941)
T TIGR01517 317 EED--------AQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKD 360 (941)
T ss_pred chh--------hHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhC
Confidence 000 00122256666777777778888888888888887655543
No 178
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=68.25 E-value=10 Score=38.29 Aligned_cols=51 Identities=22% Similarity=0.367 Sum_probs=43.5
Q ss_pred EEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---cCCc
Q 003371 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE---CGIL 705 (825)
Q Consensus 655 ~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~---~GI~ 705 (825)
.+-|.+.++|-.-|++.+|++.|+.++++|+.+|--..+.-+.+.++ ||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 35699999999999999999999999999999998777777766655 5664
No 179
>PLN02151 trehalose-phosphatase
Probab=68.14 E-value=74 Score=35.37 Aligned_cols=48 Identities=15% Similarity=0.055 Sum_probs=34.6
Q ss_pred CeEEeeeecccC--CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 003371 653 GLTLLGIVGIKD--PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE 701 (825)
Q Consensus 653 ~l~llG~v~i~D--plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~ 701 (825)
|-||+-++---| .+-|+.+++++.|. .+..|.++||........+..-
T Consensus 106 DGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~ 155 (354)
T PLN02151 106 DGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKL 155 (354)
T ss_pred CccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCC
Confidence 344554442222 25688999999999 5679999999999988877643
No 180
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=68.07 E-value=9 Score=40.37 Aligned_cols=49 Identities=12% Similarity=0.087 Sum_probs=39.4
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCcc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITG---DNVFTAKAIATECGILR 706 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~V~mvTG---D~~~tA~aIA~~~GI~~ 706 (825)
|++.-.+.+=|++.++|+.|++.|++++++|| ..........+++|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 34444566668999999999999999999996 66777788888888754
No 181
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=67.97 E-value=23 Score=41.31 Aligned_cols=99 Identities=15% Similarity=0.045 Sum_probs=62.8
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCccccc-ccc--cceeeechhhhcCCHHHHHhhccCeeEEE
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATE-CGILRLDQ-QVE--KGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~-~GI~~~~~-~~~--~~~vi~G~~~~~~~~~~~~~~~~~~~V~a 741 (825)
+++++.+.+ ++.|- ++++|+=...-++.+|++ +|+..--. +.. ..-.++|. +-.
T Consensus 111 l~~~a~~~~---~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~------------------i~g 168 (497)
T PLN02177 111 VHPETWRVF---NSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGF------------------MKK 168 (497)
T ss_pred cCHHHHHHH---HhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeee------------------ecC
Confidence 677766554 55674 499999999999999988 89863100 000 01111111 111
Q ss_pred --ecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCC
Q 003371 742 --RSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGI 786 (825)
Q Consensus 742 --r~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~ 786 (825)
.+.-++|..-++..........+-||..||.|+|..||-+.+++.
T Consensus 169 ~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 169 PGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 134467877776433211122578999999999999999999985
No 182
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=65.22 E-value=13 Score=38.81 Aligned_cols=90 Identities=16% Similarity=0.110 Sum_probs=54.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++-||+.++++.|++. +++.++|.-+.. .+..|+.... ..++...++ .+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~f-----d~i~~~~~~------------------~~~K 163 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYF-----EFVLRAGPH------------------GRSK 163 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhh-----ceeEecccC------------------CcCC
Confidence 4668999999999875 888899886654 2556764321 112111111 1122
Q ss_pred HHHHHHHHHHHHhC---CCEEEEEcCC-ccCHHHhhhCCccEec
Q 003371 745 PFDKLLMVQCLKKK---GHVVAVTGDG-TNDAPALKEADVGLSM 784 (825)
Q Consensus 745 P~dK~~lV~~Lq~~---g~vVa~~GDG-~NDapALk~AdVGiam 784 (825)
|.- ..+-..+++. .+-+.|+||. ..|..+-+.|++-...
T Consensus 164 P~p-~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 164 PFS-DMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred CcH-HHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 321 1222333333 3568999999 5999999999876543
No 183
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=62.18 E-value=8.2 Score=37.82 Aligned_cols=84 Identities=12% Similarity=0.107 Sum_probs=53.4
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
++.||+.++++. +.++|.-+......+-+.+||.... ..++.+++.. ...
T Consensus 90 ~~~~g~~~~L~~-------~~i~Tn~~~~~~~~~l~~~~l~~~f-----d~v~~~~~~~------------------~~K 139 (175)
T TIGR01493 90 PPWPDSAAALAR-------VAILSNASHWAFDQFAQQAGLPWYF-----DRAFSVDTVR------------------AYK 139 (175)
T ss_pred CCCCchHHHHHH-------HhhhhCCCHHHHHHHHHHCCCHHHH-----hhhccHhhcC------------------CCC
Confidence 578999999983 6789998888888889999986421 1123333221 112
Q ss_pred HHHH--HHHHHHHHhCCCEEEEEcCCccCHHHhhhC
Q 003371 745 PFDK--LLMVQCLKKKGHVVAVTGDGTNDAPALKEA 778 (825)
Q Consensus 745 P~dK--~~lV~~Lq~~g~vVa~~GDG~NDapALk~A 778 (825)
|.-. ....+.+.-..+.+.|+||...|..+-+++
T Consensus 140 P~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 140 PDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred CCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 3222 233333332345689999999998876653
No 184
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=57.72 E-value=35 Score=34.81 Aligned_cols=91 Identities=15% Similarity=0.172 Sum_probs=59.9
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEec
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARS 743 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~ 743 (825)
=++-|++.++++.++.. .++.++|--....+....+++||.... ..++.++. ....
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~F----d~v~~s~~-------------------~g~~ 153 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYF----DAVFISED-------------------VGVA 153 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhh----heEEEecc-------------------cccC
Confidence 35668999999999998 999999998888899999999965532 11222211 2233
Q ss_pred CHHHHHHHHHHHHhCC---CEEEEEcCC-ccCHHHhhhCC
Q 003371 744 SPFDKLLMVQCLKKKG---HVVAVTGDG-TNDAPALKEAD 779 (825)
Q Consensus 744 sP~dK~~lV~~Lq~~g---~vVa~~GDG-~NDapALk~Ad 779 (825)
.|. +...-..+++.| +.+.|+||. .||..+-++++
T Consensus 154 KP~-~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G 192 (229)
T COG1011 154 KPD-PEIFEYALEKLGVPPEEALFVGDSLENDILGARALG 192 (229)
T ss_pred CCC-cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcC
Confidence 443 334444455543 569999996 67834444443
No 185
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=57.04 E-value=23 Score=39.09 Aligned_cols=104 Identities=20% Similarity=0.159 Sum_probs=67.4
Q ss_pred cccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-C-------Ccccccccccceee----------echhhhcCCHH
Q 003371 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATEC-G-------ILRLDQQVEKGEVV----------EGVEFRNYTDE 728 (825)
Q Consensus 667 R~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~-G-------I~~~~~~~~~~~vi----------~G~~~~~~~~~ 728 (825)
-|++++.++.|+++|+++.++|.-....+..+.+.+ | +... ...++ ++..|+....+
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~y-----FD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDY-----FDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhh-----CcEEEeCCCCCcccCCCCceEEEeCC
Confidence 479999999999999999999999999999999996 6 3321 11222 23344433321
Q ss_pred HHHhh------ccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCC-ccCHHHhh-hC
Q 003371 729 ERIQK------VDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDG-TNDAPALK-EA 778 (825)
Q Consensus 729 ~~~~~------~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG-~NDapALk-~A 778 (825)
.-... +.+-+|+..-+-. .+-+.+.-.+..|+++||- ..|.-.-+ .+
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~---~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~ 315 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLK---QFHELLKWRGKEVLYFGDHIYGDLLRSKKKR 315 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHH---HHHHHHCCCCCcEEEECCcchHHHHhhHHhc
Confidence 11001 2333466654443 3444555678999999997 45777665 44
No 186
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=55.69 E-value=14 Score=34.55 Aligned_cols=33 Identities=18% Similarity=0.136 Sum_probs=29.3
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAK 696 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~ 696 (825)
+++.+++.++++.+++.|+.++++||.......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 678899999999999999999999999876543
No 187
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=55.13 E-value=24 Score=34.65 Aligned_cols=86 Identities=23% Similarity=0.283 Sum_probs=59.0
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEE
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNV----FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMA 741 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~----~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~a 741 (825)
+++=+++.|..-++.|=.++.+||... .+++..|+...|.+.+ -.+|+
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~----------------------------pv~f~ 166 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN----------------------------PVIFA 166 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCc----------------------------ceeec
Confidence 345567888888999999999999875 4566777777775431 12455
Q ss_pred ecCHH-HHHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCc
Q 003371 742 RSSPF-DKLLMVQCLKKKGHVVAVTGDGTNDAPALKEADV 780 (825)
Q Consensus 742 r~sP~-dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdV 780 (825)
...|. .+..=...+|+++- -..-||.-||.-|-|+|.+
T Consensus 167 Gdk~k~~qy~Kt~~i~~~~~-~IhYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 167 GDKPKPGQYTKTQWIQDKNI-RIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred cCCCCcccccccHHHHhcCc-eEEecCCchhhhHHHhcCc
Confidence 54441 12233556666654 4467999999999999965
No 188
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=53.10 E-value=3.3e+02 Score=34.63 Aligned_cols=244 Identities=16% Similarity=0.107 Sum_probs=130.0
Q ss_pred cHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----C
Q 003371 155 GLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKIS-----N 229 (825)
Q Consensus 155 s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~-----~ 229 (825)
.|+..+++.+....+....+.+.+.......... |+-... +++..++.++..+...+.-.+++++.... +
T Consensus 73 ~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~~~~----~~I~~~-i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~ 147 (917)
T COG0474 73 KFLRQFKDPFIILLLVAALLSAFVGDWVDAGVDA----IVILLV-VVINALLGFVQEYRAEKALEALKKMSSPKAKVLRD 147 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCcce----eeehHH-HHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeC
Confidence 4555555555555555555555555432110001 222333 33444555888888887777777764321 2
Q ss_pred CCeeEE----EeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCC--CCCCCeee---ec-CCCCcee
Q 003371 230 NIKVEV----VREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSM--TGESDHVE---VD-STNNPFL 299 (825)
Q Consensus 230 ~~~v~V----~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~L--TGEs~pv~---k~-~~~~~~l 299 (825)
...+++ ++-|....+...|.+|-|...|+.-+ .=+|=-.+.|++.-|+=.+. +.|..|.. ++ .-.+..+
T Consensus 148 g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V 226 (917)
T COG0474 148 GKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-LEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTV 226 (917)
T ss_pred CcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-ceEEcccccCCCcchhccccccccccccccCCccceEEeCCEE
Confidence 222222 23588999999999999999999887 45666667787754442222 22333332 11 0146778
Q ss_pred eeCceeeeceEEEEEEEEcccchHHHHHhhc-cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 003371 300 FSGSKVADGYAQMLVVSVGMNTAWGEMMSSI-SSDSNERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGE 378 (825)
Q Consensus 300 ~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~-~~~~~~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~ 378 (825)
.+|+-..--...+.-|..|..+ +.+... .....-.-.+.+....+.......++++.++.+..--..|. .
T Consensus 227 ~~G~~~giVvaTG~~T~~G~ia---~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~-~----- 297 (917)
T COG0474 227 VSGRAKGIVVATGFETEFGKIA---RLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLL-E----- 297 (917)
T ss_pred EcceEEEEEEEEcCccHHHHHH---HhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHH-H-----
Confidence 8887544444455556666555 223232 22222222233333333333333333333322222011011 1
Q ss_pred CCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 003371 379 NGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKR 431 (825)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~ 431 (825)
.++..+..+++++-.+.|.-+-++..++...-.++
T Consensus 298 ------------------~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~ 332 (917)
T COG0474 298 ------------------SFLTALALAVAAVPEGLPAVVTIALALGAQRMAKD 332 (917)
T ss_pred ------------------HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Confidence 44556777888888889998988888887765444
No 189
>PLN02423 phosphomannomutase
Probab=52.22 E-value=17 Score=38.25 Aligned_cols=39 Identities=26% Similarity=0.411 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhCCCEEEEEcC----CccCHHHhhh-CCccEecC
Q 003371 746 FDKLLMVQCLKKKGHVVAVTGD----GTNDAPALKE-ADVGLSMG 785 (825)
Q Consensus 746 ~dK~~lV~~Lq~~g~vVa~~GD----G~NDapALk~-AdVGiamg 785 (825)
-+|..-++.|+ ...-|++.|| |.||.+||+. -=+|+++.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 38999999999 6678889999 8999999996 77788875
No 190
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=50.88 E-value=2e+02 Score=36.95 Aligned_cols=200 Identities=12% Similarity=0.083 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc----hhCCCeeEEE-----eCCEEEEEEecCcccCeEEEeCCCCeeeceEEE
Q 003371 199 IFVAVFLVIVVSAFSNFRQARQFDKLSK----ISNNIKVEVV-----REARRLQISIFDLVVGDIVFLKIGDQIPADGLF 269 (825)
Q Consensus 199 i~~~v~lv~~v~~~~~~~~~~~~~~l~~----~~~~~~v~V~-----R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgil 269 (825)
+++.-.++.+..-.+..+..+++.++.. ...+.+.+.+ .-|....+...|.+|.|.+.++..+ +=+|=-.
T Consensus 113 vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~VdeS~ 191 (997)
T TIGR01106 113 VVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVDNSS 191 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEEccc
Confidence 3333444566666777777777776621 1122222222 3588999999999999999998653 4456666
Q ss_pred EecCcceecCCCCCCCCCeeeecC--CCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccC-CCCCCChhHHHHHH
Q 003371 270 LDGHSLQVDESSMTGESDHVEVDS--TNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISS-DSNERTPLQARLDK 346 (825)
Q Consensus 270 i~g~~l~VDES~LTGEs~pv~k~~--~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~-~~~~~tplq~~l~~ 346 (825)
+.|++.-|.-..-.-+..|..... -.+..+.+|+-..-=...+.=+..|.-. +++..... ...-...+++..+.
T Consensus 192 LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~---~~~~~~~~~~~pl~~~~~~~~~~ 268 (997)
T TIGR01106 192 LTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIA---SLASGLENGKTPIAIEIEHFIHI 268 (997)
T ss_pred cCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHH---hhhhhcccCCCcHHHHHHHHHHH
Confidence 777775443221110111221110 1355677776433222233344445333 33332222 12223455666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Q 003371 347 LTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLA 426 (825)
Q Consensus 347 ~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la 426 (825)
++.....+++++.++.++.. ..|.. .+...+..++..+-.+.|..++++...+..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~-~~~~~------------------------~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~ 323 (997)
T TIGR01106 269 ITGVAVFLGVSFFILSLILG-YTWLE------------------------AVIFLIGIIVANVPEGLLATVTVCLTLTAK 323 (997)
T ss_pred HHHHHHHHHHHHHHHHHHhc-CCHHH------------------------HHHHHHHHHhhcCCccchHHHHHHHHHHHH
Confidence 66665555554444433321 12211 122233445555667778888888777665
Q ss_pred H
Q 003371 427 Y 427 (825)
Q Consensus 427 ~ 427 (825)
.
T Consensus 324 ~ 324 (997)
T TIGR01106 324 R 324 (997)
T ss_pred H
Confidence 3
No 191
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=50.50 E-value=26 Score=36.69 Aligned_cols=134 Identities=19% Similarity=0.270 Sum_probs=69.5
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccc--------cc--eeeechhhhcCCHHHHHhh
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVE--------KG--EVVEGVEFRNYTDEERIQK 733 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~--------~~--~vi~G~~~~~~~~~~~~~~ 733 (825)
-.+|+|+.+.++.|++.+|.+.++|+-=-.....+-++-|...++..+. .+ .-+.|+-+..++..+-.
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~-- 166 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESA-- 166 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHH--
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccc--
Confidence 4689999999999999999999999887777777778878776543210 01 11112211111111100
Q ss_pred ccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCHHHhhhC---CccEecCC--CchH----HHHHhcCeeeccCC
Q 003371 734 VDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDAPALKEA---DVGLSMGI--QGTE----VAKESSDIVILDDD 804 (825)
Q Consensus 734 ~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDapALk~A---dVGiamg~--~gt~----vAk~aaDivlldd~ 804 (825)
+ +.+ ..-+.++. ...|...||..-|+.|-.-. +.-+.+|- ...| .=+++=||||.+|.
T Consensus 167 l-------~~~-----~~~~~~~~-R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~ 233 (246)
T PF05822_consen 167 L-------EDS-----PYFKQLKK-RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQ 233 (246)
T ss_dssp H-------TTH-----HHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--
T ss_pred c-------cCc-----hHHHHhcc-CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCC
Confidence 0 000 11122333 35688899999999986655 22222221 1112 34578999999997
Q ss_pred chHHHHHH
Q 003371 805 FTSVATVL 812 (825)
Q Consensus 805 f~sIv~~i 812 (825)
=-.++..|
T Consensus 234 tm~v~~~i 241 (246)
T PF05822_consen 234 TMDVPNAI 241 (246)
T ss_dssp B-HHHHHH
T ss_pred CchHHHHH
Confidence 66666655
No 192
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=50.23 E-value=1.3e+02 Score=32.64 Aligned_cols=64 Identities=19% Similarity=0.248 Sum_probs=36.3
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcCC-ccCHH---HhhhCCccEecCCCch---HHHHHhcCeeecc
Q 003371 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGDG-TNDAP---ALKEADVGLSMGIQGT---EVAKESSDIVILD 802 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~--~g~vVa~~GDG-~NDap---ALk~AdVGiamg~~gt---~vAk~aaDivlld 802 (825)
-|.-|||.-=.++++...- .|..|+++|-| +==.| .|.+++.-+.+--+-| ..+-..||||+.-
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 3556677655555544422 38999999997 54444 4555555554331222 1233568998863
No 193
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=49.44 E-value=5.4e+02 Score=33.30 Aligned_cols=36 Identities=17% Similarity=0.311 Sum_probs=26.8
Q ss_pred ccCeEEEeCCCCeeeceEEEEe---cCcceecCCCCCCC
Q 003371 250 VVGDIVFLKIGDQIPADGLFLD---GHSLQVDESSMTGE 285 (825)
Q Consensus 250 vvGDIV~l~~Gd~VPaDgili~---g~~l~VDES~LTGE 285 (825)
+-|....+..-|.+|-|.++++ |..+-+|=-.+.|+
T Consensus 235 Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~ 273 (1054)
T TIGR01657 235 RNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS 273 (1054)
T ss_pred ECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc
Confidence 4588888999999999999997 55555565556663
No 194
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=49.18 E-value=51 Score=38.76 Aligned_cols=40 Identities=18% Similarity=0.302 Sum_probs=32.6
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHcCCc
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNV------------FTAKAIATECGIL 705 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~------------~tA~aIA~~~GI~ 705 (825)
+-|+++++++.|+++|+++.++|.=.. ..+.++.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997443 3466777778764
No 195
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=48.83 E-value=23 Score=32.53 Aligned_cols=39 Identities=23% Similarity=0.274 Sum_probs=30.7
Q ss_pred cccHHHHHHHHHhCCCe-EEEEcCCCHHHHHHHHHHcCCc
Q 003371 667 RPGVQKAVEACQSAGVE-IKMITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 667 R~~v~~aI~~l~~aGI~-V~mvTGD~~~tA~aIA~~~GI~ 705 (825)
.+.+.+.+++|.+.|++ +|+.+|.....+...|++.||-
T Consensus 65 ~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 65 PDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred HHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 46788999999999996 9999999999999999999874
No 196
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=47.11 E-value=1e+02 Score=29.23 Aligned_cols=81 Identities=10% Similarity=0.131 Sum_probs=52.5
Q ss_pred HHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCC--eEEEEcCCC--
Q 003371 616 GMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV--EIKMITGDN-- 691 (825)
Q Consensus 616 ~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI--~V~mvTGD~-- 691 (825)
-+...|++|+-+....-++ .+ -+...+.+-.++|+-++.=.--+..++.++.|+++|+ .++|+=|--
T Consensus 24 ~l~~~GfeVi~LG~~v~~e-------~~--v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi 94 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQE-------EF--IKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVV 94 (134)
T ss_pred HHHHCCCEEEECCCCCCHH-------HH--HHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCc
Confidence 3466899998887632211 11 1222345667888888777778889999999999997 345566631
Q ss_pred ----HHHHHHHHHHcCCc
Q 003371 692 ----VFTAKAIATECGIL 705 (825)
Q Consensus 692 ----~~tA~aIA~~~GI~ 705 (825)
...-..-++++|+.
T Consensus 95 ~~~d~~~~~~~l~~~Gv~ 112 (134)
T TIGR01501 95 GKQDFPDVEKRFKEMGFD 112 (134)
T ss_pred ChhhhHHHHHHHHHcCCC
Confidence 11224567899964
No 197
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=46.21 E-value=46 Score=36.62 Aligned_cols=58 Identities=22% Similarity=0.358 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCEEEEEcCCc--------------------cCHHHhhhC--CccEecCCCch---HHHHH--hcCeeecc
Q 003371 750 LMVQCLKKKGHVVAVTGDGT--------------------NDAPALKEA--DVGLSMGIQGT---EVAKE--SSDIVILD 802 (825)
Q Consensus 750 ~lV~~Lq~~g~vVa~~GDG~--------------------NDapALk~A--dVGiamg~~gt---~vAk~--aaDivlld 802 (825)
.+++.|+++|..|+++.=|. .|-|+|-+- ++.+.+|..-. ..|.+ .+|+||+|
T Consensus 70 ~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviilD 149 (325)
T PRK00652 70 ALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIILD 149 (325)
T ss_pred HHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEEc
Confidence 45677888899999984332 377766554 67777774322 33333 58999999
Q ss_pred CCchH
Q 003371 803 DDFTS 807 (825)
Q Consensus 803 d~f~s 807 (825)
|.|..
T Consensus 150 DGfQh 154 (325)
T PRK00652 150 DGLQH 154 (325)
T ss_pred CCccC
Confidence 99864
No 198
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.43 E-value=2e+02 Score=30.94 Aligned_cols=63 Identities=19% Similarity=0.325 Sum_probs=36.5
Q ss_pred EEEecCHHHHHHHHHHHHh--CCCEEEEEcC-CccCHH---HhhhCCccEecCCCchH-H--HHHhcCeeec
Q 003371 739 VMARSSPFDKLLMVQCLKK--KGHVVAVTGD-GTNDAP---ALKEADVGLSMGIQGTE-V--AKESSDIVIL 801 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~--~g~vVa~~GD-G~NDap---ALk~AdVGiamg~~gt~-v--Ak~aaDivll 801 (825)
-|.=|||.-=.++++...- .|..|+++|- |+-=.| .|.+++.-+.+-.+-|. . .-..||||+.
T Consensus 136 ~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 136 VMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 3566777655445444322 3899999999 666666 35555444443222232 2 3467999885
No 199
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=43.85 E-value=27 Score=37.29 Aligned_cols=45 Identities=18% Similarity=0.351 Sum_probs=39.2
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATEC 702 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~ 702 (825)
|++.--..+=||+.++|+.|+++|++++.+|--...+....++++
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 777777888899999999999999999999999888888666554
No 200
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=43.69 E-value=72 Score=33.04 Aligned_cols=63 Identities=19% Similarity=0.208 Sum_probs=32.7
Q ss_pred EEEecCHHHHHHHHHHHHhCC-------CEEEEEcCCccCHHHhhhC------CccEecCCCchHHHHHhcCeeec
Q 003371 739 VMARSSPFDKLLMVQCLKKKG-------HVVAVTGDGTNDAPALKEA------DVGLSMGIQGTEVAKESSDIVIL 801 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~g-------~vVa~~GDG~NDapALk~A------dVGiamg~~gt~vAk~aaDivll 801 (825)
|-.|..-..|...|+.|.+.. ..+.++||...|-.|++.. ++++.+|....-.-..+|++-|.
T Consensus 157 vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~ 232 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLD 232 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES----------------
T ss_pred EEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccc
Confidence 445665566999999887653 2689999999999998773 56777773221112244555444
No 201
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=43.46 E-value=12 Score=32.19 Aligned_cols=20 Identities=40% Similarity=0.811 Sum_probs=15.7
Q ss_pred ecCcccCeEEEe-CCCCeeec
Q 003371 246 IFDLVVGDIVFL-KIGDQIPA 265 (825)
Q Consensus 246 ~~dLvvGDIV~l-~~Gd~VPa 265 (825)
-.+|.+||.|.+ +.||.||-
T Consensus 47 ~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 47 ELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HTT-BBT-EEEEEEETTTEEE
T ss_pred HcCCCCCCEEEEEECCCccce
Confidence 457999999999 79999996
No 202
>COG3329 Predicted permease [General function prediction only]
Probab=42.55 E-value=1.3e+02 Score=32.48 Aligned_cols=64 Identities=14% Similarity=0.226 Sum_probs=37.7
Q ss_pred HHHHHHHhhcCCCcCCCCCCccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhh
Q 003371 134 EDVSRRSQLFGANTYHKPPPKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGG 197 (825)
Q Consensus 134 ~~~~~r~~~~G~N~~~~~~~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~ 197 (825)
+|....|+.|-+-.-.+...--.|+++.|.|.++.+..++...++-++.|-..+...+.++++.
T Consensus 185 ~d~~ssr~~~~~~~~~ed~~v~~~ell~Esflnpal~lllggl~iGlitGe~g~~vl~~F~~~l 248 (372)
T COG3329 185 TDLASSRQEYLSPQWGEDNRVKIWELLQESFLNPALVLLLGGLAIGLITGEQGESVLKPFFDPL 248 (372)
T ss_pred hhhhhhhhhhcccccCcccchhhHHHHHHHHcCchHHHHHHHHHHhheeccCchhhhhhhhHHH
Confidence 3455444444443333333356799999999999998887776666665532222223455543
No 203
>PRK01906 tetraacyldisaccharide 4'-kinase; Provisional
Probab=40.86 E-value=56 Score=36.15 Aligned_cols=59 Identities=22% Similarity=0.380 Sum_probs=39.4
Q ss_pred HHHHHHHHhCCCEEEEEcCC-------------------ccCHHHhhhC--CccEecCCCchHHH----HH--hcCeeec
Q 003371 749 LLMVQCLKKKGHVVAVTGDG-------------------TNDAPALKEA--DVGLSMGIQGTEVA----KE--SSDIVIL 801 (825)
Q Consensus 749 ~~lV~~Lq~~g~vVa~~GDG-------------------~NDapALk~A--dVGiamg~~gt~vA----k~--aaDivll 801 (825)
..+++.|+++|..|+++.=| ..|-|.|-+- ++-+.+|..-.+.+ ++ .+|+||+
T Consensus 76 ~~La~~l~~~G~~~~IlSRGYg~~~~~~~~v~~~~~~~~~GDEpllla~~~~~~V~V~~dR~~aa~~l~~~~~~~dviIl 155 (338)
T PRK01906 76 IALVDALRAAGFTPGVVSRGYGAKIKHPTAVTPASRASDAGDEPLLIARRTDAPVWVCPDRVAAAQALLAAHPGVDVIVS 155 (338)
T ss_pred HHHHHHHHHcCCceEEEecCCCCCCCCCeEEcCCCChhhhCcHHHHhhhcCCCeEEEeCcHHHHHHHHHHhCCCCCEEEE
Confidence 35678888889888887433 2588866544 56666665433322 22 4899999
Q ss_pred cCCchH
Q 003371 802 DDDFTS 807 (825)
Q Consensus 802 dd~f~s 807 (825)
||.|..
T Consensus 156 DDGfQH 161 (338)
T PRK01906 156 DDGLQH 161 (338)
T ss_pred CCCCcc
Confidence 999875
No 204
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=40.70 E-value=1.3e+02 Score=28.00 Aligned_cols=76 Identities=11% Similarity=0.069 Sum_probs=41.6
Q ss_pred EEEecCH-HHHHHHHHHHHhCCCEEEEEcCCcc--CHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHh
Q 003371 739 VMARSSP-FDKLLMVQCLKKKGHVVAVTGDGTN--DAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPG 815 (825)
Q Consensus 739 V~ar~sP-~dK~~lV~~Lq~~g~vVa~~GDG~N--DapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~g 815 (825)
++++..+ -++ .+++.+. +=+.|...|-|.| |..++++-+|-++-..... +...||.+ +.+--..-+.+
T Consensus 42 ii~~~~~~~~~-~~l~~~~-~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~~g~~--~~aVAE~a-----~~T~e~~~~~~ 112 (133)
T PF00389_consen 42 IIVGSGTPLTA-EVLEAAP-NLKLISTAGAGVDNIDLEAAKERGIPVTNVPGYN--AEAVAEHA-----GYTDEARERMA 112 (133)
T ss_dssp EEESTTSTBSH-HHHHHHT-T-SEEEESSSSCTTB-HHHHHHTTSEEEE-TTTT--HHHHHHHH-----TGBHHHHHHHH
T ss_pred EEEcCCCCcCH-HHHhccc-eeEEEEEcccccCcccHHHHhhCeEEEEEeCCcC--Ccchhccc-----hhHHHHHHHHH
Confidence 3444444 343 4455553 3457888899988 8889999988887543211 12223333 44444444555
Q ss_pred HHhhcccc
Q 003371 816 DQLHSGCF 823 (825)
Q Consensus 816 R~i~~ni~ 823 (825)
+.+.+|+.
T Consensus 113 ~~~~~ni~ 120 (133)
T PF00389_consen 113 EIAAENIE 120 (133)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555553
No 205
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=40.60 E-value=6.3e+02 Score=32.13 Aligned_cols=221 Identities=15% Similarity=0.147 Sum_probs=100.4
Q ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----hhCCCeeEEE-----eCCEEEEEEecCcccCeEEEeCCCC
Q 003371 191 EGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSK----ISNNIKVEVV-----REARRLQISIFDLVVGDIVFLKIGD 261 (825)
Q Consensus 191 ~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~----~~~~~~v~V~-----R~g~~~~I~~~dLvvGDIV~l~~Gd 261 (825)
++..-.+.+++.. ++.+..-....+.-+.+.++.. ...+.+...+ .-|....+...|.+|-|.+.++..
T Consensus 38 ~~~~Il~vi~~~~-~i~~~qe~~a~~~~~~L~~~~~~~~~ViRdg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~- 115 (917)
T TIGR01116 38 EPFVILLILVANA-IVGVWQERNAEKAIEALKEYESEHAKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLK- 115 (917)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEec-
Confidence 3444333333333 3345555555555555554421 1122222222 348889999999999999998765
Q ss_pred eeeceEEEEecCcceecCCC--CCCCC-CeeeecC--CCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccC-CCC
Q 003371 262 QIPADGLFLDGHSLQVDESS--MTGES-DHVEVDS--TNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISS-DSN 335 (825)
Q Consensus 262 ~VPaDgili~g~~l~VDES~--LTGEs-~pv~k~~--~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~-~~~ 335 (825)
.+=+|=-.+.|++.-+.-.. ..++. .+..+.. -.+..+.+|.-..-=...+.=+..|. +.+.+..... ...
T Consensus 116 ~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gk---i~~~~~~~~~~~t~ 192 (917)
T TIGR01116 116 TLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGK---IRDEMRAAEQEDTP 192 (917)
T ss_pred ceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHH---HHHHhhccCCCCCC
Confidence 23356666677764332221 11111 1111110 14666777764333222233333332 1122222221 222
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhcc
Q 003371 336 ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPE 415 (825)
Q Consensus 336 ~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~ 415 (825)
-+..+.+....+...+..+++++.++.+..+. .+..+... . ..++..+...+..++..+-.+.|.
T Consensus 193 lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~-~~~~~~~~----~----------~~~~~~~~~~i~l~v~~iP~~Lp~ 257 (917)
T TIGR01116 193 LQKKLDEFGELLSKVIGLICILVWVINIGHFN-DPALGGGW----I----------QGAIYYFKIAVALAVAAIPEGLPA 257 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccchh----H----------HHHHHHHHHHHhhhhhccccccHH
Confidence 23344444455554444443333333222111 00000000 0 001113334455566677788888
Q ss_pred chhHHHHHHHHHHHHH
Q 003371 416 GLPLAVTLTLAYSMKR 431 (825)
Q Consensus 416 ~Lplavtl~la~~~~~ 431 (825)
.++++...+.....++
T Consensus 258 ~vti~l~~~~~~m~~~ 273 (917)
T TIGR01116 258 VITTCLALGTRKMAKK 273 (917)
T ss_pred HHHHHHHHHHHHHHHC
Confidence 8888888777654433
No 206
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=39.57 E-value=46 Score=32.35 Aligned_cols=41 Identities=20% Similarity=0.098 Sum_probs=37.2
Q ss_pred CCCcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 003371 664 DPCRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~ 705 (825)
=.+|||+.+.++.|++. +++.++|.-....|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34799999999999955 999999999999999999999865
No 207
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=38.62 E-value=1.3e+02 Score=28.65 Aligned_cols=81 Identities=14% Similarity=0.163 Sum_probs=54.2
Q ss_pred HHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCC-eE-EEEcCCC--
Q 003371 616 GMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV-EI-KMITGDN-- 691 (825)
Q Consensus 616 ~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI-~V-~mvTGD~-- 691 (825)
-+...|++|+.+....-.+ + -.....+.+-.++|+-.+.-...+.+++.++.|++.|. .+ +++-|--
T Consensus 26 ~lr~~G~eVi~LG~~vp~e-------~--i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~ 96 (137)
T PRK02261 26 ALTEAGFEVINLGVMTSQE-------E--FIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVV 96 (137)
T ss_pred HHHHCCCEEEECCCCCCHH-------H--HHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCC
Confidence 4567899999987632111 1 11223455667888888888999999999999999976 34 4444432
Q ss_pred ----HHHHHHHHHHcCCc
Q 003371 692 ----VFTAKAIATECGIL 705 (825)
Q Consensus 692 ----~~tA~aIA~~~GI~ 705 (825)
..-...-++++|+.
T Consensus 97 ~~~~~~~~~~~l~~~G~~ 114 (137)
T PRK02261 97 GKHDFEEVEKKFKEMGFD 114 (137)
T ss_pred CccChHHHHHHHHHcCCC
Confidence 23345678888864
No 208
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=38.58 E-value=1.1e+02 Score=28.28 Aligned_cols=82 Identities=12% Similarity=0.178 Sum_probs=54.7
Q ss_pred HHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCC-eE-EEEcCCCHH
Q 003371 616 GMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV-EI-KMITGDNVF 693 (825)
Q Consensus 616 ~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI-~V-~mvTGD~~~ 693 (825)
-+...|++|+.+.-. .+.+ + ......+.+-.++++-+......+.+++.++.|+++|. ++ +|+-|-.+.
T Consensus 22 ~l~~~G~~vi~lG~~-vp~e------~--~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~ 92 (122)
T cd02071 22 ALRDAGFEVIYTGLR-QTPE------E--IVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPP 92 (122)
T ss_pred HHHHCCCEEEECCCC-CCHH------H--HHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCH
Confidence 356789998887642 2111 1 11223345666888888888899999999999999987 44 455555444
Q ss_pred HHHHHHHHcCCcc
Q 003371 694 TAKAIATECGILR 706 (825)
Q Consensus 694 tA~aIA~~~GI~~ 706 (825)
--.+-.++.|+..
T Consensus 93 ~~~~~~~~~G~d~ 105 (122)
T cd02071 93 EDYELLKEMGVAE 105 (122)
T ss_pred HHHHHHHHCCCCE
Confidence 3456667899754
No 209
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=38.09 E-value=9.4e+02 Score=30.45 Aligned_cols=200 Identities=16% Similarity=0.104 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhch----hCCCeeEEEe-----CCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecC
Q 003371 203 VFLVIVVSAFSNFRQARQFDKLSKI----SNNIKVEVVR-----EARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGH 273 (825)
Q Consensus 203 v~lv~~v~~~~~~~~~~~~~~l~~~----~~~~~v~V~R-----~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~ 273 (825)
..++.++.-+...+.-+++.++... ..+.+.+.+. -|....+...|.+|-|.+.++.. ..=+|=-.+.|+
T Consensus 93 ~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~-~l~VDES~LTGE 171 (884)
T TIGR01522 93 VVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAV-DLSIDESNLTGE 171 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcC-ceEEEcccccCC
Confidence 3345555555666666667666321 1222223332 48889999999999999999753 334677777777
Q ss_pred cceecCCCC--CCCC--Ceeeec--CCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhhccCCCCC-CChhHHHHHH
Q 003371 274 SLQVDESSM--TGES--DHVEVD--STNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSSISSDSNE-RTPLQARLDK 346 (825)
Q Consensus 274 ~l~VDES~L--TGEs--~pv~k~--~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~~~~~~~~-~tplq~~l~~ 346 (825)
+.-|.=..- .++. .+..+. .-.+..+.+|+-..-=...+.=+..|. +.+++......... ...+.+....
T Consensus 172 S~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gk---i~~~v~~~~~~kt~lq~~l~~l~~~ 248 (884)
T TIGR01522 172 TTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGA---VFKMMQAIEKPKTPLQKSMDLLGKQ 248 (884)
T ss_pred CcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHH---HHHHhccCCCCCCcHHHHHHHHHHH
Confidence 754433221 1111 001111 013566777764433222233333332 22344333332222 2223333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Q 003371 347 LTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLA 426 (825)
Q Consensus 347 ~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la 426 (825)
+......++.++.++.++. -..+ .. .+...+..++..+-.+.|..+|+++..+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~-~~~~-~~-----------------------~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~ 303 (884)
T TIGR01522 249 LSLVSFGVIGVICLVGWFQ-GKDW-LE-----------------------MFTISVSLAVAAIPEGLPIIVTVTLALGVL 303 (884)
T ss_pred HHHHHHHHHHHHHHHHHHh-cCCH-HH-----------------------HHHHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence 3332222222222222221 1011 11 223344556667778888888888888877
Q ss_pred HHHHH
Q 003371 427 YSMKR 431 (825)
Q Consensus 427 ~~~~~ 431 (825)
...++
T Consensus 304 r~ak~ 308 (884)
T TIGR01522 304 RMSKK 308 (884)
T ss_pred HHhhc
Confidence 65543
No 210
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=37.24 E-value=64 Score=35.50 Aligned_cols=59 Identities=25% Similarity=0.465 Sum_probs=40.1
Q ss_pred HHHHHHHHhCCCEEEEEcCCc--------------------cCHHHhhhCCcc--EecCCC---chHHHHH--hcCeeec
Q 003371 749 LLMVQCLKKKGHVVAVTGDGT--------------------NDAPALKEADVG--LSMGIQ---GTEVAKE--SSDIVIL 801 (825)
Q Consensus 749 ~~lV~~Lq~~g~vVa~~GDG~--------------------NDapALk~AdVG--iamg~~---gt~vAk~--aaDivll 801 (825)
..+++.|+++|..|+++.=|. .|-|+|-+-..+ +.+|.. |...+.+ .+|+||+
T Consensus 55 ~~L~~~L~~~G~~~~IlSRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviil 134 (326)
T PF02606_consen 55 IWLARLLQARGYRPAILSRGYGRKSKGEPILVSDGSDAEEVGDEPLLLARKLPVPVIVGPDRVAAARAALKEFPADVIIL 134 (326)
T ss_pred HHHHHHHHhcCCceEEEcCCCCCCCCCCeEEEeCCCChhhhcCHHHHHHHhcCCcEEEeCcHHHHHHHHHHHCCCCEEEE
Confidence 367888899998888874433 277876555544 777754 2223333 4899999
Q ss_pred cCCchH
Q 003371 802 DDDFTS 807 (825)
Q Consensus 802 dd~f~s 807 (825)
||.|..
T Consensus 135 DDGfQh 140 (326)
T PF02606_consen 135 DDGFQH 140 (326)
T ss_pred cCCccc
Confidence 999975
No 211
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=36.94 E-value=2.7e+02 Score=32.48 Aligned_cols=157 Identities=17% Similarity=0.119 Sum_probs=85.5
Q ss_pred eCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEEE
Q 003371 237 REARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVVS 316 (825)
Q Consensus 237 R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~~ 316 (825)
+-|....+...|.+|-|.+.++- ..=+|--.+.|++.-+.-.. |+. + ..+.+++.|+....-...+.-+.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~~--g~~--v----~~gs~~~~G~~~~~v~~~~~~s~ 122 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKTA--GDA--V----FAGTYVFNGTLIVVVSATGPNTF 122 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeecc--CCc--c----ccCcEEeccEEEEEEEEeccccH
Confidence 35889999999999999999866 56667777888875444321 332 1 25677888887654222111111
Q ss_pred EcccchHHHHHhhccCCCCC-CChhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH--HHhcCCCCCCCcccccCCCCCch
Q 003371 317 VGMNTAWGEMMSSISSDSNE-RTPLQARL-DKLTSTIGKVGLAVAFLVLVVLLAR--YFTGNTKGENGIKEYNGSNTDID 392 (825)
Q Consensus 317 vG~~T~~g~i~~~~~~~~~~-~tplq~~l-~~~a~~i~~~~l~~a~l~~iv~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 392 (825)
. ..++.++..-.+.+.. .....+.. ..+......+++++.++.+...... |..
T Consensus 123 ~---~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~-------------------- 179 (499)
T TIGR01494 123 G---GKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFK-------------------- 179 (499)
T ss_pred H---HHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHH--------------------
Confidence 1 1123333333322222 12222222 3444444444443333333221110 211
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH
Q 003371 393 DVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMK 430 (825)
Q Consensus 393 ~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~ 430 (825)
.+..++...+...-.++|.++|++...+.....+
T Consensus 180 ----~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~ 213 (499)
T TIGR01494 180 ----IFLRALILLVIAIPIALPLAVTIALAVGDARLAK 213 (499)
T ss_pred ----HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Confidence 3445566667777888888888888888766554
No 212
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=35.46 E-value=1.5e+02 Score=32.50 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=38.3
Q ss_pred eeecccCCCcccHHHHHHHHHhC----CCeEEEEcCCC---HH-HHHHHHHHcCCc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSA----GVEIKMITGDN---VF-TAKAIATECGIL 705 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~a----GI~V~mvTGD~---~~-tA~aIA~~~GI~ 705 (825)
|++.-.+++-|++.++++.|+.. |+.+..+|-.. .. .+..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 66777788899999999999998 99999999654 33 355566778874
No 213
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=35.29 E-value=2.1e+02 Score=30.21 Aligned_cols=126 Identities=9% Similarity=0.032 Sum_probs=66.5
Q ss_pred cccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHH
Q 003371 667 RPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF 746 (825)
Q Consensus 667 R~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~ 746 (825)
-++..++++.|++.++.+.+.|+.............|+- .-|..+... .-.+..+++.-.|.
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g--------------~~~~~i~~~----~~~~~~~~gKP~p~ 183 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG--------------PFVTALEYA----TDTKATVVGKPSKT 183 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch--------------HHHHHHHHH----hCCCceeecCCCHH
Confidence 368889999999999999999886654332222222221 111100000 00011133433443
Q ss_pred HHHHHHHHHHhCCCEEEEEcCCc-cCHHHhhhCCccEecCCCch---H-H--HHHhcCeeeccCCchHHHHHH
Q 003371 747 DKLLMVQCLKKKGHVVAVTGDGT-NDAPALKEADVGLSMGIQGT---E-V--AKESSDIVILDDDFTSVATVL 812 (825)
Q Consensus 747 dK~~lV~~Lq~~g~vVa~~GDG~-NDapALk~AdVGiamg~~gt---~-v--Ak~aaDivlldd~f~sIv~~i 812 (825)
-=..+.+.+.-....+.|+||.. +|..+-+.+.+--..=..|. + . ....+|.++- ++..+...+
T Consensus 184 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~--sl~el~~~l 254 (257)
T TIGR01458 184 FFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCD--SLPHAVDLI 254 (257)
T ss_pred HHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEEC--CHHHHHHHH
Confidence 22333343433347799999996 89999888876433211331 1 1 1234676663 677776543
No 214
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.63 E-value=6e+02 Score=27.42 Aligned_cols=168 Identities=16% Similarity=0.190 Sum_probs=80.5
Q ss_pred CChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCC--cccHHHHHHHHHh
Q 003371 602 MDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPC--RPGVQKAVEACQS 679 (825)
Q Consensus 602 l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~Dpl--R~~v~~aI~~l~~ 679 (825)
+.++.++++.+.++.+..+|.+. .+|--... |.+ .--++.-++.|++
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p-~Laii~vg------------------------------~d~as~~Yv~~k~k~~~~ 59 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQP-GLAVILVG------------------------------DNPASQVYVRNKVKACED 59 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-eEEEEEeC------------------------------CCchHHHHHHHHHHHHHH
Confidence 34566777778888887777543 44332221 111 1224567788999
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHh------------------hccCeeEEE
Q 003371 680 AGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQ------------------KVDKIRVMA 741 (825)
Q Consensus 680 aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~------------------~~~~~~V~a 741 (825)
.||.+.++-=+...+-..+.+.+.-++.+.. ..++.+.-+-...+++++..+ .+..-..|.
T Consensus 60 ~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~-V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~ 138 (285)
T PRK14189 60 NGFHSLKDRYPADLSEAELLARIDELNRDPK-IHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFR 138 (285)
T ss_pred cCCEEEEEECCCCCCHHHHHHHHHHHcCCCC-CCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCc
Confidence 9998776643322222222222222222211 123333333223333332222 222222355
Q ss_pred ecCHHHHHHHHHHHH--hCCCEEEEEcCCcc-C---HHHhhhCCccEecCCCch-HH--HHHhcCeeec
Q 003371 742 RSSPFDKLLMVQCLK--KKGHVVAVTGDGTN-D---APALKEADVGLSMGIQGT-EV--AKESSDIVIL 801 (825)
Q Consensus 742 r~sP~dK~~lV~~Lq--~~g~vVa~~GDG~N-D---apALk~AdVGiamg~~gt-~v--Ak~aaDivll 801 (825)
=|||.-=.++++... -.|..|+++|-|.. = +.+|...+.-+.+--+.| +. .-..||||+.
T Consensus 139 PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~ 207 (285)
T PRK14189 139 PCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVA 207 (285)
T ss_pred CCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEE
Confidence 666655444444432 13788889988755 2 334544444333322223 22 3457888875
No 215
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=32.82 E-value=22 Score=35.13 Aligned_cols=14 Identities=36% Similarity=0.316 Sum_probs=12.5
Q ss_pred EEecCcCccccCce
Q 003371 454 ICTDKTGTLTLNQM 467 (825)
Q Consensus 454 Ic~DKTGTLT~n~m 467 (825)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999883
No 216
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=32.32 E-value=2.3e+02 Score=29.95 Aligned_cols=42 Identities=24% Similarity=0.213 Sum_probs=30.7
Q ss_pred ccCCCcccHHHHHHHHHhCCCe-EEEEcCCC-HHHHHHHHHHcC
Q 003371 662 IKDPCRPGVQKAVEACQSAGVE-IKMITGDN-VFTAKAIATECG 703 (825)
Q Consensus 662 i~DplR~~v~~aI~~l~~aGI~-V~mvTGD~-~~tA~aIA~~~G 703 (825)
+-|-+-++..+.++.|++.|+. +.+++-.. .+..+.+++.+.
T Consensus 121 ipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~~ 164 (256)
T TIGR00262 121 VADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKSQ 164 (256)
T ss_pred ECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhCC
Confidence 3355557889999999999998 45776666 456677887764
No 217
>TIGR00682 lpxK tetraacyldisaccharide 4'-kinase. Also called lipid-A 4'-kinase. This essential gene encodes an enzyme in the pathway of lipid A biosynthesis in Gram-negative organisms. A single copy of this protein is found in Gram-negative bacteria. PSI-BLAST converges on this set of apparent orthologs without identifying any other homologs.
Probab=32.25 E-value=1e+02 Score=33.69 Aligned_cols=58 Identities=24% Similarity=0.429 Sum_probs=36.7
Q ss_pred HHHHHHHhCCCEEEEEcCCc--------------------cCHHHhhhC--CccEecCCCchHH---H-HH-hcCeeecc
Q 003371 750 LMVQCLKKKGHVVAVTGDGT--------------------NDAPALKEA--DVGLSMGIQGTEV---A-KE-SSDIVILD 802 (825)
Q Consensus 750 ~lV~~Lq~~g~vVa~~GDG~--------------------NDapALk~A--dVGiamg~~gt~v---A-k~-aaDivlld 802 (825)
.+++.|+++|..++++.=|. -|-|.|-+- ++-+.+|..-.+. + ++ .+|+||+|
T Consensus 49 ~La~~l~~~G~~~~IlSRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~a~~~~~~~~~~dviilD 128 (311)
T TIGR00682 49 WLAELLKDRGLRVGVLSRGYGSKTKKYTLVGSKKHTASEVGDEPVLLAKYLHATVVASKDRKDAILLILEQLDPDVIILD 128 (311)
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCeeeeCCCCChHHcCcHHHHhhhhcCCcEEEeChHHHHHHHHHhcCCCCEEEEC
Confidence 56788888888888775331 266755443 4555555433332 2 22 48999999
Q ss_pred CCchH
Q 003371 803 DDFTS 807 (825)
Q Consensus 803 d~f~s 807 (825)
|.|..
T Consensus 129 DGfQh 133 (311)
T TIGR00682 129 DGLQH 133 (311)
T ss_pred CCCcC
Confidence 99975
No 218
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.13 E-value=4e+02 Score=28.66 Aligned_cols=62 Identities=16% Similarity=0.340 Sum_probs=32.8
Q ss_pred EEecCHHHHHHHHHHHHh--CCCEEEEEcCCcc----CHHHhhhCCccEecCCCch-HH--HHHhcCeeec
Q 003371 740 MARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKEADVGLSMGIQGT-EV--AKESSDIVIL 801 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~--~g~vVa~~GDG~N----DapALk~AdVGiamg~~gt-~v--Ak~aaDivll 801 (825)
|.=|||.-=.++++...- .|..|+++|-+.. =+.+|...+.-+.+--+-| +. .-..|||++.
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~ 205 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVV 205 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 455666655555554432 3788888888643 2234544433333322233 22 2356888875
No 219
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.12 E-value=3.4e+02 Score=29.43 Aligned_cols=63 Identities=14% Similarity=0.294 Sum_probs=34.1
Q ss_pred EEEecCHHHHHHHHHHHH--hCCCEEEEEc-CCccCHH---HhhhCCccEecCCC---chHHHHHhcCeeec
Q 003371 739 VMARSSPFDKLLMVQCLK--KKGHVVAVTG-DGTNDAP---ALKEADVGLSMGIQ---GTEVAKESSDIVIL 801 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq--~~g~vVa~~G-DG~NDap---ALk~AdVGiamg~~---gt~vAk~aaDivll 801 (825)
.|.=|||.-=.++++... -.|..|+++| -+.-=.| .|.+++.-+.+-.+ ..+.+-..||||+.
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIs 207 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVA 207 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 355666655444444432 1388999999 4444444 45556555544311 12223356888875
No 220
>PLN02591 tryptophan synthase
Probab=31.82 E-value=3.2e+02 Score=28.80 Aligned_cols=108 Identities=25% Similarity=0.274 Sum_probs=64.8
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCe-EEEEcCCC-HHHHHHHHHHc-CCcccccccccceeeechhhhcCCHHHHHhhc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVE-IKMITGDN-VFTAKAIATEC-GILRLDQQVEKGEVVEGVEFRNYTDEERIQKV 734 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~-V~mvTGD~-~~tA~aIA~~~-GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~ 734 (825)
|++.-.-|+ ++..+..+.|++.|+. |.++|-.. ....+.||+.. |.+-- ....-++|.
T Consensus 109 GviipDLP~-ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY~----Vs~~GvTG~-------------- 169 (250)
T PLN02591 109 GLVVPDLPL-EETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVYL----VSSTGVTGA-------------- 169 (250)
T ss_pred EEEeCCCCH-HHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEEE----eeCCCCcCC--------------
Confidence 444333343 7888999999999997 56666666 35678888876 33310 000001111
Q ss_pred cCeeEEEe-cCHHHHHHHHHHHHhCCCEEEEEcCCcc---CHHHhhh--CCccEecCCCchHHHHHh
Q 003371 735 DKIRVMAR-SSPFDKLLMVQCLKKKGHVVAVTGDGTN---DAPALKE--ADVGLSMGIQGTEVAKES 795 (825)
Q Consensus 735 ~~~~V~ar-~sP~dK~~lV~~Lq~~g~vVa~~GDG~N---DapALk~--AdVGiamg~~gt~vAk~a 795 (825)
| ..|.+=...++.+|+...+-.++|=|++ |+..+.+ || |+-+ |+.+.|.-
T Consensus 170 -------~~~~~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GAD-GvIV---GSalVk~i 225 (250)
T PLN02591 170 -------RASVSGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGAD-GVIV---GSAMVKAL 225 (250)
T ss_pred -------CcCCchhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCC-EEEE---CHHHHHhh
Confidence 1 1255556778888887666677899999 5555544 55 4544 45565644
No 221
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL []. The function of this family is unknown.
Probab=31.79 E-value=57 Score=33.65 Aligned_cols=30 Identities=20% Similarity=0.403 Sum_probs=24.5
Q ss_pred cCCCcccHHHHHHHHHhCCCe--EEEEcCCCH
Q 003371 663 KDPCRPGVQKAVEACQSAGVE--IKMITGDNV 692 (825)
Q Consensus 663 ~DplR~~v~~aI~~l~~aGI~--V~mvTGD~~ 692 (825)
+..+.+...+.|+.|.+.|+. +.|+||+-+
T Consensus 69 ~~~v~~~lq~~i~~le~~G~d~illlCTG~F~ 100 (221)
T PF07302_consen 69 KKKVEPRLQACIAQLEAQGYDVILLLCTGEFP 100 (221)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEeccCCCC
Confidence 556778899999999999987 567799854
No 222
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=31.27 E-value=1.1e+02 Score=25.38 Aligned_cols=33 Identities=27% Similarity=0.243 Sum_probs=24.9
Q ss_pred CCeeEEEeCCEEEEEEe---cCcccCeEEEeCCCCe
Q 003371 230 NIKVEVVREARRLQISI---FDLVVGDIVFLKIGDQ 262 (825)
Q Consensus 230 ~~~v~V~R~g~~~~I~~---~dLvvGDIV~l~~Gd~ 262 (825)
.....|-.+|.+++|+. .++.|||-|.+..|--
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 45677888999999985 4788999999999843
No 223
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=31.02 E-value=1.2e+02 Score=31.13 Aligned_cols=195 Identities=16% Similarity=0.241 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-hchhCCCeeEEEeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCc-ceecCC
Q 003371 203 VFLVIVVSAFSNFRQARQFDKL-SKISNNIKVEVVREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHS-LQVDES 280 (825)
Q Consensus 203 v~lv~~v~~~~~~~~~~~~~~l-~~~~~~~~v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~-l~VDES 280 (825)
++++++++.+.++.++++.++. .+..+...- +...+ +.-|....+...|.+|-|.+++.... +-+|=-
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v----~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ 71 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ------KKVTV----IRDGRWQKIPSSELVPGDIIILKAGDIVPADGI 71 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS------EEEEE----EETTEEEEEEGGGT-TTSEEEEETTEBESSEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCC------ccEEE----EeccccccchHhhccceeeeecccccccccCcc
Confidence 4455566666666665555444 444332221 11222 33478999999999999999996543 222322
Q ss_pred CCC-CCCCeeeecC-----CCCce------eeeCceeeeceEEEEEEEEcccchHHH--HHhhccCCCCCCChhHHHHHH
Q 003371 281 SMT-GESDHVEVDS-----TNNPF------LFSGSKVADGYAQMLVVSVGMNTAWGE--MMSSISSDSNERTPLQARLDK 346 (825)
Q Consensus 281 ~LT-GEs~pv~k~~-----~~~~~------l~sGt~v~~G~~~~~V~~vG~~T~~g~--i~~~~~~~~~~~tplq~~l~~ 346 (825)
.|. | ....+. ...|. ...|..+..|....-=...|.-+.-|. ....+.+......+....+++
T Consensus 72 ll~~g---~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~ 148 (230)
T PF00122_consen 72 LLESG---SAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLER 148 (230)
T ss_dssp EEESS---EEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHH
T ss_pred ceecc---ccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhh
Confidence 222 2 122210 11222 226777888864332122222222221 112222222222333355666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Q 003371 347 LTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLA 426 (825)
Q Consensus 347 ~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av~ilvvavP~~Lplavtl~la 426 (825)
....+....+.++++..++. ++... +......+...+...+...=...|.++++++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~---~~~~~--------------------~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~ 205 (230)
T PF00122_consen 149 KLNKIAKILIIIILAIAILV---FIIWF--------------------FNDSGISFFKSFLFAISLLIVLIPCALPLALP 205 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHCH--------------------TGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHH
T ss_pred hhHHHHHHHHhcccccchhh---hccce--------------------ecccccccccccccccceeeeecccceeehHH
Confidence 66666555444333222221 11110 00011222444555555556678888888877
Q ss_pred HHHHHHh
Q 003371 427 YSMKRMM 433 (825)
Q Consensus 427 ~~~~~m~ 433 (825)
.+....+
T Consensus 206 ~~~~~~~ 212 (230)
T PF00122_consen 206 LSLAIAA 212 (230)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766543
No 224
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=30.92 E-value=1.7e+02 Score=27.54 Aligned_cols=82 Identities=13% Similarity=0.082 Sum_probs=55.9
Q ss_pred HHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCC-eE-EEEcCCCHH
Q 003371 616 GMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV-EI-KMITGDNVF 693 (825)
Q Consensus 616 ~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI-~V-~mvTGD~~~ 693 (825)
-|...|+.|+-+....-++ +.-+...+.+-..+|+-++...--+.+++.++.|+++|. .+ +|+=|-.+.
T Consensus 25 ~l~~~GfeVi~lg~~~s~e---------~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~ 95 (132)
T TIGR00640 25 AYADLGFDVDVGPLFQTPE---------EIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPP 95 (132)
T ss_pred HHHhCCcEEEECCCCCCHH---------HHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCCh
Confidence 4567888888765421111 112233466778999999999999999999999999987 44 444444444
Q ss_pred HHHHHHHHcCCcc
Q 003371 694 TAKAIATECGILR 706 (825)
Q Consensus 694 tA~aIA~~~GI~~ 706 (825)
.-.+--+++|+..
T Consensus 96 ~~~~~l~~~Gvd~ 108 (132)
T TIGR00640 96 QDFDELKEMGVAE 108 (132)
T ss_pred HhHHHHHHCCCCE
Confidence 4466688899864
No 225
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=30.84 E-value=1e+02 Score=26.18 Aligned_cols=47 Identities=11% Similarity=0.147 Sum_probs=38.0
Q ss_pred eecccCCCcccHHHHHHHHHhCCCeEEE-EcCCCHHHHHHHHHHcCCc
Q 003371 659 IVGIKDPCRPGVQKAVEACQSAGVEIKM-ITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 659 ~v~i~DplR~~v~~aI~~l~~aGI~V~m-vTGD~~~tA~aIA~~~GI~ 705 (825)
++.+.+..++.+.+..+.|+++|++|.+ ..+.+..--..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445567788889999999999999988 5777777777888888875
No 226
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=30.50 E-value=87 Score=28.62 Aligned_cols=38 Identities=26% Similarity=0.285 Sum_probs=29.5
Q ss_pred CcccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCc
Q 003371 666 CRPGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 666 lR~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~ 705 (825)
--+++.++++.+++.|++++.+|++.. -...|.+-|+.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~~ 92 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGVP 92 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCCc
Confidence 457899999999999999999999874 33356655644
No 227
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=29.23 E-value=1.8e+02 Score=31.28 Aligned_cols=44 Identities=23% Similarity=0.340 Sum_probs=34.3
Q ss_pred ccCeEEeeeecccCCCcccHHHHHHHHHhCCCe-EEEEcCCCHHH
Q 003371 651 EEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVE-IKMITGDNVFT 694 (825)
Q Consensus 651 e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~-V~mvTGD~~~t 694 (825)
+.++..+.=+..+|.=|.+...-+..++.+||+ |..+|||.+..
T Consensus 68 ~~g~~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 68 ETGIEPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp HTT--EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred HhCCceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 568889999999999899999999999999996 99999997543
No 228
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=28.98 E-value=59 Score=25.70 Aligned_cols=24 Identities=21% Similarity=0.387 Sum_probs=17.9
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCC
Q 003371 668 PGVQKAVEACQSAGVEIKMITGDN 691 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~V~mvTGD~ 691 (825)
|+-+++++.|.++|++|.|.|-+.
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~e 25 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSE 25 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHH
Confidence 667899999999999999988643
No 229
>PF15584 Imm44: Immunity protein 44
Probab=28.77 E-value=24 Score=30.71 Aligned_cols=19 Identities=32% Similarity=0.646 Sum_probs=15.3
Q ss_pred cCeEEEeCCCCeeeceEEE
Q 003371 251 VGDIVFLKIGDQIPADGLF 269 (825)
Q Consensus 251 vGDIV~l~~Gd~VPaDgil 269 (825)
+.+-..|+.|++||||||-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 3455678899999999986
No 230
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=28.71 E-value=1.4e+02 Score=25.65 Aligned_cols=48 Identities=15% Similarity=0.156 Sum_probs=38.7
Q ss_pred eeecccC---CCcccHHHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHcCCc
Q 003371 658 GIVGIKD---PCRPGVQKAVEACQSAGVEIKMI-TGDNVFTAKAIATECGIL 705 (825)
Q Consensus 658 G~v~i~D---plR~~v~~aI~~l~~aGI~V~mv-TGD~~~tA~aIA~~~GI~ 705 (825)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|+.
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4555666 67778889999999999998877 677778888889999985
No 231
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=28.49 E-value=1.5e+02 Score=26.82 Aligned_cols=81 Identities=21% Similarity=0.330 Sum_probs=55.1
Q ss_pred HHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCC-eE-EEEcCCCHH
Q 003371 616 GMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV-EI-KMITGDNVF 693 (825)
Q Consensus 616 ~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI-~V-~mvTGD~~~ 693 (825)
-+...|++|+.+.. +++.++ ......+.+..++|+-...++--+.+++.++.+|+.+- ++ +++-|-...
T Consensus 22 ~l~~~G~~V~~lg~-~~~~~~--------l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~ 92 (119)
T cd02067 22 ALRDAGFEVIDLGV-DVPPEE--------IVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVT 92 (119)
T ss_pred HHHHCCCEEEECCC-CCCHHH--------HHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCC
Confidence 44578999977652 232211 11223455667888888878888999999999999987 54 566675554
Q ss_pred HHHHHHHHcCCc
Q 003371 694 TAKAIATECGIL 705 (825)
Q Consensus 694 tA~aIA~~~GI~ 705 (825)
.-...+++.|..
T Consensus 93 ~~~~~~~~~G~D 104 (119)
T cd02067 93 RDFKFLKEIGVD 104 (119)
T ss_pred hhHHHHHHcCCe
Confidence 435688889874
No 232
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=27.80 E-value=96 Score=30.63 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=31.9
Q ss_pred CCcccHHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCc
Q 003371 665 PCRPGVQKAVEACQSAGVEIKMIT-GDNVFTAKAIATECGIL 705 (825)
Q Consensus 665 plR~~v~~aI~~l~~aGI~V~mvT-GD~~~tA~aIA~~~GI~ 705 (825)
.+-|+|+++++.|++.|+++-+.| -|.+..|+.+=+.++|.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 356999999999999999999999 58899999999999997
No 233
>PF11431 Transport_MerF: Membrane transport protein MerF; InterPro: IPR021091 This entry represents Mercury ion transport protein MerF, which has a core helix-loop-helix domain. It also has two vicinal pairs of cysteine residues which are involved in the transport of Hg(II) across the membrane and are exposed to the cytoplasm []. ; PDB: 1WAZ_A 2LJ2_A 2H3O_A.
Probab=27.80 E-value=96 Score=23.42 Aligned_cols=17 Identities=29% Similarity=0.378 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHhhhc
Q 003371 167 TTILILLVCAALSLGFG 183 (825)
Q Consensus 167 ~~~~il~v~a~lsl~~g 183 (825)
|.+.+++.+..+|-..|
T Consensus 2 PiLviL~g~vGLsa~vg 18 (46)
T PF11431_consen 2 PILVILFGAVGLSALVG 18 (46)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred ceehHHHHHhHHHHHHH
Confidence 55667777777777664
No 234
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=27.51 E-value=4.7e+02 Score=27.90 Aligned_cols=131 Identities=16% Similarity=0.166 Sum_probs=81.3
Q ss_pred eEEeeeecccCCCcccHHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCC--cccccccccceeeechhhhcCC----
Q 003371 654 LTLLGIVGIKDPCRPGVQKAVEACQSA-GVEIKMITGDNVFTAKAIATECGI--LRLDQQVEKGEVVEGVEFRNYT---- 726 (825)
Q Consensus 654 l~llG~v~i~DplR~~v~~aI~~l~~a-GI~V~mvTGD~~~tA~aIA~~~GI--~~~~~~~~~~~vi~G~~~~~~~---- 726 (825)
|+-+..--...++-++..+.++.|... ...|+|+||....-......--|| ...+.- ....+.|.......
T Consensus 29 l~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa--~~r~~~g~~~~~~~~~~~ 106 (266)
T COG1877 29 LTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGA--EVRDPNGKWWINLAEEAD 106 (266)
T ss_pred ccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecce--EEecCCCCeeEecCHHHH
Confidence 344444556677888999999999988 457999999999988887774444 211100 00011222211111
Q ss_pred --------------------------------------HHHH--------Hh-h--------ccCeeEEEecCHHHHHHH
Q 003371 727 --------------------------------------DEER--------IQ-K--------VDKIRVMARSSPFDKLLM 751 (825)
Q Consensus 727 --------------------------------------~~~~--------~~-~--------~~~~~V~ar~sP~dK~~l 751 (825)
+++. .. . ..+..|-.|.+-.-|...
T Consensus 107 ~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a 186 (266)
T COG1877 107 LRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAA 186 (266)
T ss_pred hhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHH
Confidence 1110 00 0 012336677776779999
Q ss_pred HHHHHhC----CCEEEEEcCCccCHHHhhhCC----ccEecCC
Q 003371 752 VQCLKKK----GHVVAVTGDGTNDAPALKEAD----VGLSMGI 786 (825)
Q Consensus 752 V~~Lq~~----g~vVa~~GDG~NDapALk~Ad----VGiamg~ 786 (825)
++.+.+. |..+.+.||..-|-.|++..+ +++-+|.
T Consensus 187 ~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~ 229 (266)
T COG1877 187 IKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGV 229 (266)
T ss_pred HHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecC
Confidence 9977654 446889999999999999987 5555663
No 235
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=27.47 E-value=8.4e+02 Score=26.65 Aligned_cols=140 Identities=20% Similarity=0.218 Sum_probs=73.0
Q ss_pred cCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeec--ccCCCcccHHHHH-HHH
Q 003371 601 SMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVG--IKDPCRPGVQKAV-EAC 677 (825)
Q Consensus 601 ~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~--i~DplR~~v~~aI-~~l 677 (825)
.++++.|+++.+.++++ ||+.=. ..+......-..+|++. +.+|.-.+....| +.|
T Consensus 26 ~Vs~eTr~kV~~a~~el---gY~pN~------------------~Ar~L~~~~s~~Ig~i~p~~~~~~~~~i~~gi~~~~ 84 (333)
T COG1609 26 YVSEETREKVLAAIKEL---GYRPNA------------------VARSLRTGRTKTIGLVVPDITNPFFAEILKGIEEAA 84 (333)
T ss_pred CCCHHHHHHHHHHHHHH---CCCCCH------------------HHHHHHhCCCCEEEEEeCCCCCchHHHHHHHHHHHH
Confidence 46788899998888776 332100 01111122223555542 4455666666665 457
Q ss_pred HhCCCeEEEEcCCC-HHH---HHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHH-------
Q 003371 678 QSAGVEIKMITGDN-VFT---AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPF------- 746 (825)
Q Consensus 678 ~~aGI~V~mvTGD~-~~t---A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~------- 746 (825)
++.|+.+.+...++ ++. +...-.+-+. .++++.+........+.+.+.-..+.++.|..|.
T Consensus 85 ~~~gy~~~l~~~~~~~~~e~~~~~~l~~~~v--------dGiIi~~~~~~~~~~~~l~~~~~P~V~i~~~~~~~~~~~V~ 156 (333)
T COG1609 85 REAGYSLLLANTDDDPEKEREYLETLLQKRV--------DGLILLGERPNDSLLELLAAAGIPVVVIDRSPPGLGVPSVG 156 (333)
T ss_pred HHcCCEEEEECCCCCHHHHHHHHHHHHHcCC--------CEEEEecCCCCHHHHHHHHhcCCCEEEEeCCCccCCCCEEE
Confidence 77888887777776 222 2222222222 4556666222222222233332334455554442
Q ss_pred -----HHHHHHHHHHhCCC-EEEEEcCCc
Q 003371 747 -----DKLLMVQCLKKKGH-VVAVTGDGT 769 (825)
Q Consensus 747 -----dK~~lV~~Lq~~g~-vVa~~GDG~ 769 (825)
--..+++.|.++|| .++++|.+.
T Consensus 157 ~Dn~~~~~~a~~~L~~~G~~~i~~i~~~~ 185 (333)
T COG1609 157 IDNFAGAYLATEHLIELGHRRIAFIGGPL 185 (333)
T ss_pred EChHHHHHHHHHHHHHCCCceEEEEeCCC
Confidence 22467899999875 488887764
No 236
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=26.97 E-value=97 Score=37.10 Aligned_cols=51 Identities=24% Similarity=0.304 Sum_probs=37.3
Q ss_pred cCeEEeeeecccCCCcccHHHHHHHHHhCCCeE---------EEEcCCCHHHHHHHHHHcCCc
Q 003371 652 EGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEI---------KMITGDNVFTAKAIATECGIL 705 (825)
Q Consensus 652 ~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V---------~mvTGD~~~tA~aIA~~~GI~ 705 (825)
.+.+|+=.=.++---|.++++.++.+ |=+| .++-|++.-.=..=|++|||-
T Consensus 596 ~gkt~V~TGtL~~~sR~eak~~le~l---Gakv~~SVSkktD~vvaG~~aGSKl~kA~eLgv~ 655 (667)
T COG0272 596 AGKTFVLTGTLEGMSRDEAKALLEAL---GAKVSGSVSKKTDYVVAGENAGSKLAKAQELGVK 655 (667)
T ss_pred CCCEEEEeccCCCCCHHHHHHHHHHc---CCEEeceecccccEEEEcCCCChHHHHHHHcCCe
Confidence 45555544455667788888888877 4343 578899999988999999974
No 237
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=26.18 E-value=2.1e+02 Score=36.99 Aligned_cols=115 Identities=12% Similarity=0.129 Sum_probs=67.6
Q ss_pred CccHHHHHHHHhhhHHHHHHHHHHHHHhhhccccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh----
Q 003371 153 PKGLLHFVLEAFKDTTILILLVCAALSLGFGIKEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKIS---- 228 (825)
Q Consensus 153 ~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~---- 228 (825)
|+.+|+.+.+...-.++++.++..+..+-..-... ++-+ +++.+++..+..++.+|++.++.++.+...
T Consensus 18 p~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t-----~~~p--L~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~ 90 (1057)
T TIGR01652 18 PKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGT-----SIVP--LAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVL 90 (1057)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccH-----hHHh--HHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEE
Confidence 56788887777766666665555543221110001 1222 233344566778888888888777775321
Q ss_pred C-C-Ce----eEEEeCCEEEEEEecCcccCeEEEeCCCC---eeeceEEEEecCc
Q 003371 229 N-N-IK----VEVVREARRLQISIFDLVVGDIVFLKIGD---QIPADGLFLDGHS 274 (825)
Q Consensus 229 ~-~-~~----v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd---~VPaDgili~g~~ 274 (825)
. . .. ..=++-|....+...|.+|-|++.|...+ ..=+|---++|++
T Consensus 91 ~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs 145 (1057)
T TIGR01652 91 EGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGET 145 (1057)
T ss_pred CCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCee
Confidence 1 1 11 12234588888999999999999997543 3445555556655
No 238
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=25.43 E-value=5.7e+02 Score=24.00 Aligned_cols=104 Identities=20% Similarity=0.182 Sum_probs=66.1
Q ss_pred EEeeeecccCCCcccHHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhh
Q 003371 655 TLLGIVGIKDPCRPGVQKAVEACQSAGVEIKMITGDN-VFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQK 733 (825)
Q Consensus 655 ~llG~v~i~DplR~~v~~aI~~l~~aGI~V~mvTGD~-~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~ 733 (825)
.++|.++- |--..+..-+-..|+.+|++|+-+-+|. ++.....|.+-+-.
T Consensus 5 v~~a~~g~-D~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~ad---------------------------- 55 (132)
T TIGR00640 5 ILVAKMGQ-DGHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVH---------------------------- 55 (132)
T ss_pred EEEEeeCC-CccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCC----------------------------
Confidence 46777777 7767777777788999999999998885 34444555544321
Q ss_pred ccCeeEEEecC---HHHHHHHHHHHHhCC--CEEEEEc--CCccCHHHhhhCCccEecCCCchHH
Q 003371 734 VDKIRVMARSS---PFDKLLMVQCLKKKG--HVVAVTG--DGTNDAPALKEADVGLSMGIQGTEV 791 (825)
Q Consensus 734 ~~~~~V~ar~s---P~dK~~lV~~Lq~~g--~vVa~~G--DG~NDapALk~AdVGiamg~~gt~v 791 (825)
+.+++-.. .+.=..+++.|+++| .+..++| =...|...|++++|-=-.+ .||++
T Consensus 56 ---ii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~Gvd~~~~-~gt~~ 116 (132)
T TIGR00640 56 ---VVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMGVAEIFG-PGTPI 116 (132)
T ss_pred ---EEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCCCCEEEC-CCCCH
Confidence 11233322 233356788888875 3556666 3445788899988755555 45554
No 239
>PF03739 YjgP_YjgQ: Predicted permease YjgP/YjgQ family; InterPro: IPR005495 Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long, contain about 6 transmembrane regions and may be permeases, although there is no verification of this.; GO: 0016021 integral to membrane
Probab=25.19 E-value=2e+02 Score=31.59 Aligned_cols=38 Identities=16% Similarity=0.257 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhccccc
Q 003371 401 IVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMTDQAM 438 (825)
Q Consensus 401 ~~~~av~ilvvavP~~Lplavtl~la~~~~~m~k~~~l 438 (825)
++.....-+-..++..+|+++-++..+...+|.+++-+
T Consensus 44 i~~~~~~~lP~~l~~~lP~~~lia~~~~l~~L~~~~El 81 (354)
T PF03739_consen 44 ILKYILYNLPYILSLILPLAFLIAVLLTLGRLSRNNEL 81 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchH
Confidence 33334444555566677778888888888888887754
No 240
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=24.72 E-value=1e+02 Score=39.56 Aligned_cols=101 Identities=14% Similarity=0.186 Sum_probs=62.8
Q ss_pred CccHHHHHHHHhhhHHHHHHHHHHHHHhhhcc-ccCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhCCC
Q 003371 153 PKGLLHFVLEAFKDTTILILLVCAALSLGFGI-KEHGAEEGWYEGGSIFVAVFLVIVVSAFSNFRQARQFDKLSKISNNI 231 (825)
Q Consensus 153 ~~s~~~~~~~~~~~~~~~il~v~a~lsl~~g~-~~~g~~~~~~d~~~i~~~v~lv~~v~~~~~~~~~~~~~~l~~~~~~~ 231 (825)
|+.+|.-+-+.-.-.++++.++.++-..-++- .+-. .+++.+.+..+-.++.||++.++-.+++......
T Consensus 49 Pk~l~eQf~r~aN~yFl~~~il~~ip~~~~~~~~~~~---------pl~~vl~~t~iKd~~eD~rR~~~D~~iN~~~~~v 119 (1151)
T KOG0206|consen 49 PKNLFEQFHRVANLYFLFIAILQFIPLSPFNPYTTLV---------PLLFVLGITAIKDAIEDYRRHKQDKEVNNRKVEV 119 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcccccCccceee---------ceeeeehHHHHHHHHhhhhhhhccHHhhcceeEE
Confidence 56777777765555555555554442112221 1111 1234455677789999999988888876432211
Q ss_pred ----e------eEEEeCCEEEEEEecCcccCeEEEeCCCCe
Q 003371 232 ----K------VEVVREARRLQISIFDLVVGDIVFLKIGDQ 262 (825)
Q Consensus 232 ----~------v~V~R~g~~~~I~~~dLvvGDIV~l~~Gd~ 262 (825)
. .+-++-|....+.-.+.+|+|++.|...+.
T Consensus 120 ~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~ 160 (1151)
T KOG0206|consen 120 LRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDE 160 (1151)
T ss_pred ecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCC
Confidence 1 123345778888899999999999987654
No 241
>PRK11507 ribosome-associated protein; Provisional
Probab=24.57 E-value=78 Score=26.34 Aligned_cols=26 Identities=15% Similarity=0.068 Sum_probs=21.9
Q ss_pred EEEeCCEEEEEEecCcccCeEEEeCC
Q 003371 234 EVVREARRLQISIFDLVVGDIVFLKI 259 (825)
Q Consensus 234 ~V~R~g~~~~I~~~dLvvGDIV~l~~ 259 (825)
.|..||+...-.-..|.+||+|.+.-
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 46779988888889999999999853
No 242
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=24.44 E-value=2.4e+02 Score=30.02 Aligned_cols=83 Identities=13% Similarity=0.258 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhhccCeEEEEEEeecCchhhcccchhHHhhhhh-ccCeEEeeeecccCCCcccHHHHHHHHHhCCCe-EE
Q 003371 608 SQMENIIHGMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLK-EEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVE-IK 685 (825)
Q Consensus 608 ~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~-e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~-V~ 685 (825)
+.+.+.++.+...+---+.+++..... ............. +.++..+--+...|.-|.+..+.+..++.+||+ |.
T Consensus 15 ~~l~~~~~~l~~~~pd~isvT~~~~~~---~~~~t~~~a~~l~~~~g~~~i~Hlt~r~~n~~~l~~~L~~~~~~Gi~nvL 91 (272)
T TIGR00676 15 ENLWETVDRLSPLDPDFVSVTYGAGGS---TRDRTVRIVRRIKKETGIPTVPHLTCIGATREEIREILREYRELGIRHIL 91 (272)
T ss_pred HHHHHHHHHHhcCCCCEEEeccCCCCC---cHHHHHHHHHHHHHhcCCCeeEEeeecCCCHHHHHHHHHHHHHCCCCEEE
Confidence 556666667665444445555532211 0000111112222 347778888888898888999999999999997 66
Q ss_pred EEcCCCHH
Q 003371 686 MITGDNVF 693 (825)
Q Consensus 686 mvTGD~~~ 693 (825)
.+|||.+.
T Consensus 92 ~l~GD~~~ 99 (272)
T TIGR00676 92 ALRGDPPK 99 (272)
T ss_pred EeCCCCCC
Confidence 69999984
No 243
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=24.42 E-value=4.4e+02 Score=28.02 Aligned_cols=104 Identities=17% Similarity=0.228 Sum_probs=60.1
Q ss_pred ccCCCcccHHHHHHHHHhCCCe-EEEEcCCC-HHHHHHHHHHcC-CcccccccccceeeechhhhcCCHHHHHhhccCee
Q 003371 662 IKDPCRPGVQKAVEACQSAGVE-IKMITGDN-VFTAKAIATECG-ILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIR 738 (825)
Q Consensus 662 i~DplR~~v~~aI~~l~~aGI~-V~mvTGD~-~~tA~aIA~~~G-I~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~ 738 (825)
+-|-+=++..+.++.|++.|+. +.++|=.. .+..+.|++.+. .+--- ...-++|..
T Consensus 125 ipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY~v----S~~GvTG~~----------------- 183 (263)
T CHL00200 125 IPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIYLV----STTGVTGLK----------------- 183 (263)
T ss_pred ecCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEEEE----cCCCCCCCC-----------------
Confidence 3444447788888999999986 66776665 467777887775 43100 001112211
Q ss_pred EEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCH---HHhhh--CCccEecCCCchHHHH
Q 003371 739 VMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDA---PALKE--ADVGLSMGIQGTEVAK 793 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDa---pALk~--AdVGiamg~~gt~vAk 793 (825)
...|.+=..+++.+|+.-..-.++|=|+|+. ..+.. || |+-+| +...+
T Consensus 184 ---~~~~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~~~~~~GAD-GvVVG---Salv~ 236 (263)
T CHL00200 184 ---TELDKKLKKLIETIKKMTNKPIILGFGISTSEQIKQIKGWNIN-GIVIG---SACVQ 236 (263)
T ss_pred ---ccccHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHhcCCC-EEEEC---HHHHH
Confidence 1124455677888887644445679999944 44444 34 45444 55544
No 244
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.41 E-value=2.9e+02 Score=29.82 Aligned_cols=62 Identities=13% Similarity=0.250 Sum_probs=34.2
Q ss_pred EEEecCHHHHHHHHHHHH--hCCCEEEEEcCCcc----CHHHhhh--CCccEecCCCchHH--HHHhcCeeec
Q 003371 739 VMARSSPFDKLLMVQCLK--KKGHVVAVTGDGTN----DAPALKE--ADVGLSMGIQGTEV--AKESSDIVIL 801 (825)
Q Consensus 739 V~ar~sP~dK~~lV~~Lq--~~g~vVa~~GDG~N----DapALk~--AdVGiamg~~gt~v--Ak~aaDivll 801 (825)
-|.=|||.-=.++++... -.|..|+++|-|-. =+.+|.. |.|-+.-. ...+. .-..||||+.
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s-~t~~l~~~~~~ADIVIs 207 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHS-RSKDMASYLKDADVIVS 207 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeC-CchhHHHHHhhCCEEEE
Confidence 355667765555555443 23889999999751 2223433 55555443 22222 3356888875
No 245
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=23.30 E-value=7.7e+02 Score=31.30 Aligned_cols=199 Identities=12% Similarity=0.124 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc----hhCC-------CeeEE----EeCCEEEEEEecCcccCeEEEeCCCCeee
Q 003371 200 FVAVFLVIVVSAFSNFRQARQFDKLSK----ISNN-------IKVEV----VREARRLQISIFDLVVGDIVFLKIGDQIP 264 (825)
Q Consensus 200 ~~~v~lv~~v~~~~~~~~~~~~~~l~~----~~~~-------~~v~V----~R~g~~~~I~~~dLvvGDIV~l~~Gd~VP 264 (825)
++.-.++.++.-....+...+++++.. ...+ ....| +.-|....+...|.+|-|.+.++.. -+=
T Consensus 121 v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~-~l~ 199 (903)
T PRK15122 121 VLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESR-DLF 199 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcC-ceE
Confidence 333445566666666666666666632 1112 12222 2358899999999999999988743 345
Q ss_pred ceEEEEecCcceecCCCC------------CCCCCee-eec--CCCCceeeeCceeeeceEEEEEEEEcccchHHHHHhh
Q 003371 265 ADGLFLDGHSLQVDESSM------------TGESDHV-EVD--STNNPFLFSGSKVADGYAQMLVVSVGMNTAWGEMMSS 329 (825)
Q Consensus 265 aDgili~g~~l~VDES~L------------TGEs~pv-~k~--~~~~~~l~sGt~v~~G~~~~~V~~vG~~T~~g~i~~~ 329 (825)
+|==.+.|++.-|+-... .++..+. .+. .-.+..+.+|+-..-=...+-=+..|.= .+++..
T Consensus 200 VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI---~~~v~~ 276 (903)
T PRK15122 200 ISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSL---AKSIVG 276 (903)
T ss_pred EEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHH---HHHhcC
Confidence 676677777755544321 1222111 000 0146677888744432222223333321 122211
Q ss_pred ccCCCC---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccccCCCCCchhhHHHHHHHHHHHH
Q 003371 330 ISSDSN---ERTPLQARLDKLTSTIGKVGLAVAFLVLVVLLARYFTGNTKGENGIKEYNGSNTDIDDVFNAVVSIVAAAV 406 (825)
Q Consensus 330 ~~~~~~---~~tplq~~l~~~a~~i~~~~l~~a~l~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~av 406 (825)
-..... .-.++.+.+..++.++..+.++++.+...- |. . .+...+..++
T Consensus 277 ~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~----~~-~-----------------------~l~~aisl~V 328 (903)
T PRK15122 277 TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGD----WL-E-----------------------ALLFALAVAV 328 (903)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCC----HH-H-----------------------HHHHHHHHHH
Confidence 111111 113466777788777776666555433211 11 1 2233455667
Q ss_pred HHHHHHhccchhHHHHHHHHHHHH
Q 003371 407 TIVVVAIPEGLPLAVTLTLAYSMK 430 (825)
Q Consensus 407 ~ilvvavP~~Lplavtl~la~~~~ 430 (825)
..+-.+.|..+++++..+.....+
T Consensus 329 ~~~Pe~Lp~~vt~~La~g~~~mak 352 (903)
T PRK15122 329 GLTPEMLPMIVSSNLAKGAIAMAR 352 (903)
T ss_pred HHccchHHHHHHHHHHHHHHHHHH
Confidence 777777888888888877654443
No 246
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=23.29 E-value=1.2e+02 Score=30.70 Aligned_cols=80 Identities=24% Similarity=0.405 Sum_probs=55.0
Q ss_pred HHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCC--eEEEEcCCCHH
Q 003371 616 GMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGV--EIKMITGDNVF 693 (825)
Q Consensus 616 ~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI--~V~mvTGD~~~ 693 (825)
-+...|++|+.+. .+++.++ -.....+.+..++|+-....+--+.+++.|+.+|+++. ++.++=|-...
T Consensus 105 ~l~~~G~~vi~lG-~~~p~~~--------l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~ 175 (201)
T cd02070 105 MLEANGFEVIDLG-RDVPPEE--------FVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGAPV 175 (201)
T ss_pred HHHHCCCEEEECC-CCCCHHH--------HHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECCcC
Confidence 3567899998766 2332211 11222345677899998888889999999999999998 66555555554
Q ss_pred HHHHHHHHcCCc
Q 003371 694 TAKAIATECGIL 705 (825)
Q Consensus 694 tA~aIA~~~GI~ 705 (825)
+- ..++++|-.
T Consensus 176 ~~-~~~~~~GaD 186 (201)
T cd02070 176 NQ-EFADEIGAD 186 (201)
T ss_pred CH-HHHHHcCCc
Confidence 43 588888864
No 247
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=23.26 E-value=93 Score=32.35 Aligned_cols=48 Identities=15% Similarity=0.223 Sum_probs=34.1
Q ss_pred eeecccCCCcccHHHHHHHHHhCCCeEEEEc---CCCHHHHHHHHHH-cCCc
Q 003371 658 GIVGIKDPCRPGVQKAVEACQSAGVEIKMIT---GDNVFTAKAIATE-CGIL 705 (825)
Q Consensus 658 G~v~i~DplR~~v~~aI~~l~~aGI~V~mvT---GD~~~tA~aIA~~-~GI~ 705 (825)
|++.-.+.+=|++.++|+.+++.|++++++| |.........-.+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4444446666799999999999999999998 5555544443344 6763
No 248
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=23.02 E-value=2.8e+02 Score=31.20 Aligned_cols=75 Identities=23% Similarity=0.283 Sum_probs=55.7
Q ss_pred ccHHHHHHHHHhCCCe--EEEEcCCCHHHHH-HHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecC
Q 003371 668 PGVQKAVEACQSAGVE--IKMITGDNVFTAK-AIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSS 744 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~--V~mvTGD~~~tA~-aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~s 744 (825)
.|+..+++++-+.+-+ |+-.|+-|..-|. .-|+++||... .||--.+
T Consensus 99 RGa~~~~~kla~~~~~~gViasSaGNha~a~Ayaa~~LgipaT------------------------------IVmP~~t 148 (457)
T KOG1250|consen 99 RGAGNALQKLAKQQKKAGVIASSAGNHAQAAAYAARKLGIPAT------------------------------IVMPVAT 148 (457)
T ss_pred hhHHHHHHHHHHhhhcCceEEecCccHHHHHHHHHHhcCCceE------------------------------EEecCCC
Confidence 4778888888777643 6777777766555 45788999642 3888999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEcCCccCHHHh
Q 003371 745 PFDKLLMVQCLKKKGHVVAVTGDGTNDAPAL 775 (825)
Q Consensus 745 P~dK~~lV~~Lq~~g~vVa~~GDG~NDapAL 775 (825)
|..| ++.+|..|..|.+.|+..--|-++
T Consensus 149 p~~k---iq~~~nlGA~Vil~G~~~deAk~~ 176 (457)
T KOG1250|consen 149 PLMK---IQRCRNLGATVILSGEDWDEAKAF 176 (457)
T ss_pred hHHH---HHHHhccCCEEEEecccHHHHHHH
Confidence 9998 666777899999999977655544
No 249
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=22.92 E-value=1.8e+02 Score=31.16 Aligned_cols=55 Identities=22% Similarity=0.260 Sum_probs=42.9
Q ss_pred ccCeEEeeeecccCCCccc---HHHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHcCCc
Q 003371 651 EEGLTLLGIVGIKDPCRPG---VQKAVEACQSAGVEIKMI-TGDNVFTAKAIATECGIL 705 (825)
Q Consensus 651 e~~l~llG~v~i~DplR~~---v~~aI~~l~~aGI~V~mv-TGD~~~tA~aIA~~~GI~ 705 (825)
.-+|..++++++...-.|. ..+.++.+++.+++++.. +.-+..+++.||++.|+-
T Consensus 195 ~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~ 253 (286)
T cd01019 195 RYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGAK 253 (286)
T ss_pred HcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCce
Confidence 3477888888775444444 457889999999997666 777899999999999973
No 250
>PRK09432 metF 5,10-methylenetetrahydrofolate reductase; Provisional
Probab=22.59 E-value=3e+02 Score=29.82 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=36.8
Q ss_pred ccCeEEeeeecccCCCcccHHHHHHHHHhCCCe-EEEEcCCCHH
Q 003371 651 EEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVE-IKMITGDNVF 693 (825)
Q Consensus 651 e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~-V~mvTGD~~~ 693 (825)
+.++..+-=+...|--|.+..+.+..++++||+ |..+|||.+.
T Consensus 80 ~~g~~~i~Hltcr~~n~~~l~~~L~~~~~~GI~niLaLrGD~p~ 123 (296)
T PRK09432 80 RTGLEAAPHLTCIDATPDELRTIAKDYWNNGIRHIVALRGDLPP 123 (296)
T ss_pred HhCCCeeeecccCCCCHHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 457777888888888888999999999999996 9999999764
No 251
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.56 E-value=3.2e+02 Score=29.40 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=28.2
Q ss_pred CCCcccHHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHcCCcc
Q 003371 664 DPCRPGVQKAVEACQSAGVE---IKMITGDNVFTAK------AIATECGILR 706 (825)
Q Consensus 664 DplR~~v~~aI~~l~~aGI~---V~mvTGD~~~tA~------aIA~~~GI~~ 706 (825)
..++.+.++-|+.++..|++ +.+..||++.... ..|+++||..
T Consensus 12 ~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 12 KEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 45667777777777777765 4556777766543 3466777754
No 252
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=22.51 E-value=1.5e+02 Score=24.60 Aligned_cols=47 Identities=15% Similarity=0.188 Sum_probs=35.6
Q ss_pred eecccCCCcccHHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCc
Q 003371 659 IVGIKDPCRPGVQKAVEACQSAGVEIKMIT-GDNVFTAKAIATECGIL 705 (825)
Q Consensus 659 ~v~i~DplR~~v~~aI~~l~~aGI~V~mvT-GD~~~tA~aIA~~~GI~ 705 (825)
++.+.++.++.+.+..+.|+++|++|.+.. +.+..-....|...|+.
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 344556677788888999999999988744 44777778888888873
No 253
>PLN02389 biotin synthase
Probab=22.29 E-value=8.6e+02 Score=27.36 Aligned_cols=77 Identities=18% Similarity=0.204 Sum_probs=41.1
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHH
Q 003371 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFD 747 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~d 747 (825)
+.+.+.++.+++.|+.+..-.|--......-=++.|+..- ...+++ +++ .+++ +...-++++
T Consensus 153 e~i~eiir~ik~~~l~i~~s~G~l~~E~l~~LkeAGld~~------~~~LeT------s~~----~y~~--i~~~~s~e~ 214 (379)
T PLN02389 153 NQILEYVKEIRGMGMEVCCTLGMLEKEQAAQLKEAGLTAY------NHNLDT------SRE----YYPN--VITTRSYDD 214 (379)
T ss_pred HHHHHHHHHHhcCCcEEEECCCCCCHHHHHHHHHcCCCEE------EeeecC------ChH----HhCC--cCCCCCHHH
Confidence 4555666666666666555555444444444445555431 111111 111 1111 223458899
Q ss_pred HHHHHHHHHhCCCEE
Q 003371 748 KLLMVQCLKKKGHVV 762 (825)
Q Consensus 748 K~~lV~~Lq~~g~vV 762 (825)
+.+.++.+++.|-.|
T Consensus 215 rl~ti~~a~~~Gi~v 229 (379)
T PLN02389 215 RLETLEAVREAGISV 229 (379)
T ss_pred HHHHHHHHHHcCCeE
Confidence 999999999987555
No 254
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=22.12 E-value=2.7e+02 Score=27.48 Aligned_cols=105 Identities=15% Similarity=0.210 Sum_probs=64.7
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCCHHH-HHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHH
Q 003371 669 GVQKAVEACQSAGVEIKMITGDNVFT-AKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFD 747 (825)
Q Consensus 669 ~v~~aI~~l~~aGI~V~mvTGD~~~t-A~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~d 747 (825)
|.-.++.+++..|-++-+++=.+..- +..++.-+|+. +..+.=.+|++
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-------------------------------i~~~~~~~~~e 113 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-------------------------------IKIYPYDSEEE 113 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-------------------------------EEEEEESSHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-------------------------------eEEEEECCHHH
Confidence 44556666665566666665555443 55555555552 23555567888
Q ss_pred HHHHHHHHHhCCCEEEEEcCCccCHHHhhhCCccEecCCCchHHHHHhcCeeeccCCchHHHHHHHHhHHhhccc
Q 003371 748 KLLMVQCLKKKGHVVAVTGDGTNDAPALKEADVGLSMGIQGTEVAKESSDIVILDDDFTSVATVLSPGDQLHSGC 822 (825)
Q Consensus 748 K~~lV~~Lq~~g~vVa~~GDG~NDapALk~AdVGiamg~~gt~vAk~aaDivlldd~f~sIv~~i~~gR~i~~ni 822 (825)
=...|+.+++.| .-+++|++.- ...-++ ..-..+++..+..+|-.++.+++++++.+
T Consensus 114 ~~~~i~~~~~~G-~~viVGg~~~-~~~A~~----------------~gl~~v~i~sg~esi~~Al~eA~~i~~~~ 170 (176)
T PF06506_consen 114 IEAAIKQAKAEG-VDVIVGGGVV-CRLARK----------------LGLPGVLIESGEESIRRALEEALRIARAR 170 (176)
T ss_dssp HHHHHHHHHHTT---EEEESHHH-HHHHHH----------------TTSEEEESS--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CcEEECCHHH-HHHHHH----------------cCCcEEEEEecHHHHHHHHHHHHHHHHHH
Confidence 889999999998 4557787642 111121 12346788888999999999999988653
No 255
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=22.00 E-value=7.6e+02 Score=29.25 Aligned_cols=70 Identities=19% Similarity=0.160 Sum_probs=51.4
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCCHH-HHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHH
Q 003371 669 GVQKAVEACQSAGVEIKMITGDNVF-TAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFD 747 (825)
Q Consensus 669 ~v~~aI~~l~~aGI~V~mvTGD~~~-tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~d 747 (825)
|+-.++..+++.+-++.+++=.+.. .+..++.-+|+. +.++.-.+++|
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-------------------------------i~~~~~~~~~e 143 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-------------------------------IEQRSYVTEED 143 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-------------------------------eEEEEecCHHH
Confidence 4667788888777788777766643 444566656553 33678889999
Q ss_pred HHHHHHHHHhCCCEEEEEcCCcc
Q 003371 748 KLLMVQCLKKKGHVVAVTGDGTN 770 (825)
Q Consensus 748 K~~lV~~Lq~~g~vVa~~GDG~N 770 (825)
=...|+.|++.|..| ++||++-
T Consensus 144 ~~~~v~~lk~~G~~~-vvG~~~~ 165 (538)
T PRK15424 144 ARGQINELKANGIEA-VVGAGLI 165 (538)
T ss_pred HHHHHHHHHHCCCCE-EEcCchH
Confidence 999999999999655 6799754
No 256
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=21.93 E-value=1.9e+02 Score=31.17 Aligned_cols=175 Identities=14% Similarity=0.129 Sum_probs=87.8
Q ss_pred cCcHHHHHHhcccccccCCeeecCChhhHHHHHHHHHHHhhccCeEEEEEEeecCchhhc---cc-------chhHHhhh
Q 003371 579 KGAAEIILAMCSHYYESNGVIKSMDGNGRSQMENIIHGMAASSLRCIAFAYKQVSEEETA---YN-------NDVKARQR 648 (825)
Q Consensus 579 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~i~~~a~~glR~l~lA~k~l~~~e~~---~~-------~~~~~~~~ 648 (825)
.|.|..+.+.-.. ..-.+.+.+=..-.++.+.+.+++.+|+.++.+..+.-++-..- .+ ...+....
T Consensus 72 HGv~~~~~~~l~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~~vv~~~~~~~~ 148 (281)
T PF02401_consen 72 HGVPPEVYEELKE---RGLEVIDATCPFVKKIHKIVRKYAKEGYQIVIIGDKNHPEVIGILGYAPEEKAIVVESPEDVEK 148 (281)
T ss_dssp T---HHHHHHHHH---TTEEEEE---HHHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCHHTS-EEEESSHHHHHH
T ss_pred CCCCHHHHHHHHH---cCCEEEECCChhHHHHHHHHHHHHhcCCEEEEECCCCCceEEEecccccCCceEEeCChhhhcc
Confidence 3777666654321 01122233334456788899999999999999987654321100 00 00011111
Q ss_pred hhccCeEEeeeecccCCCcccHHHHHHHHHhCCCeEE--------EEcCCCHHHHHHHHHHcCCcccccccccceeeech
Q 003371 649 LKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVEIK--------MITGDNVFTAKAIATECGILRLDQQVEKGEVVEGV 720 (825)
Q Consensus 649 ~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~V~--------mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~ 720 (825)
.+..+..-++++.=-=-.+.+..+.++.+++..-.+. -.|-+....++.+|+++.+.
T Consensus 149 l~~~~~~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~m--------------- 213 (281)
T PF02401_consen 149 LPISDPKKVAVVSQTTQSVEKFEEIVEALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDAM--------------- 213 (281)
T ss_dssp GGGSSTTCEEEEE-TTS-HHHHHHHHHHHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSEE---------------
T ss_pred cCCCCCCeEEEEEeecccHHHHHHHHHHHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCEE---------------
Confidence 2222222344444444455666677777776655544 23455555555666555432
Q ss_pred hhhcCCHHHHHhhccCeeEEEecCHHHHHHHHHHHHhCCCEEEEEcCCccCH--HHhhhC-CccEecCCCchH
Q 003371 721 EFRNYTDEERIQKVDKIRVMARSSPFDKLLMVQCLKKKGHVVAVTGDGTNDA--PALKEA-DVGLSMGIQGTE 790 (825)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~V~ar~sP~dK~~lV~~Lq~~g~vVa~~GDG~NDa--pALk~A-dVGiamg~~gt~ 790 (825)
.|.+.-....-.+|.+..++.|..+-.+.+ ..|. ..|+.+ .|||.-| ++|.
T Consensus 214 -----------------iVIGg~~SsNT~kL~eia~~~~~~t~~Ie~-~~el~~~~l~~~~~VGItaG-ASTP 267 (281)
T PF02401_consen 214 -----------------IVIGGKNSSNTRKLAEIAKEHGKPTYHIET-ADELDPEWLKGVKKVGITAG-ASTP 267 (281)
T ss_dssp -----------------EEES-TT-HHHHHHHHHHHHCTTCEEEESS-GGG--HHHHTT-SEEEEEE--TTS-
T ss_pred -----------------EEecCCCCccHHHHHHHHHHhCCCEEEeCC-ccccCHhHhCCCCEEEEEcc-CCCC
Confidence 244444445555788888888877777754 4454 457777 8999988 4443
No 257
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=21.90 E-value=2.5e+02 Score=30.31 Aligned_cols=38 Identities=24% Similarity=0.384 Sum_probs=28.5
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCCHHHHH-HHHHHcCCc
Q 003371 668 PGVQKAVEACQSAGVEIKMITGDNVFTAK-AIATECGIL 705 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~V~mvTGD~~~tA~-aIA~~~GI~ 705 (825)
+|+...-+.|+..|.+++++|......+. +..+.++..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 67777788899999999999987755554 555556653
No 258
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.48 E-value=3.5e+02 Score=29.09 Aligned_cols=62 Identities=18% Similarity=0.305 Sum_probs=34.3
Q ss_pred EEecCHHHHHHHHHHHHh--CCCEEEEEcCCcc----CHHHhhhCCccEecCCCch-HH--HHHhcCeeec
Q 003371 740 MARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN----DAPALKEADVGLSMGIQGT-EV--AKESSDIVIL 801 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~--~g~vVa~~GDG~N----DapALk~AdVGiamg~~gt-~v--Ak~aaDivll 801 (825)
|.-|||.-=.++++...- .|..|+++|.+.. =+-+|...+.-+.+--+-| +. .-..|||++.
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIs 207 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVV 207 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 556777665555555432 3888889988754 2334544443333332223 22 2256888875
No 259
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=21.47 E-value=1.7e+02 Score=32.11 Aligned_cols=90 Identities=28% Similarity=0.307 Sum_probs=58.2
Q ss_pred HHHHHHHhCCC--eEEE-EcCCCH---HHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCH
Q 003371 672 KAVEACQSAGV--EIKM-ITGDNV---FTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSP 745 (825)
Q Consensus 672 ~aI~~l~~aGI--~V~m-vTGD~~---~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP 745 (825)
-.|-.|-..|| ++++ +|+|.. .+|..|-+.+|+-... ..+++-+ =++|+.
T Consensus 214 igig~LL~~GIGDTIRVSLT~dP~~EV~va~~IL~slglr~~g-----~~iiSCP------------------tCGR~~- 269 (346)
T TIGR00612 214 AGIGILLARGIGDTIRVSLTDDPTHEVPVAFEILQSLGLRARG-----VEIVACP------------------SCGRTG- 269 (346)
T ss_pred HHHHHHHhhCCCCeEEEECCCCcHHHHHHHHHHHHHcCCCcCC-----CeEEECC------------------CCCCcC-
Confidence 34677888887 4544 689875 4567888889986542 2222222 233433
Q ss_pred HHHHHHHH----HHHh--CCCEEEEEcCCccCHHHhhhCCccEecC
Q 003371 746 FDKLLMVQ----CLKK--KGHVVAVTGDGTNDAPALKEADVGLSMG 785 (825)
Q Consensus 746 ~dK~~lV~----~Lq~--~g~vVa~~GDG~NDapALk~AdVGiamg 785 (825)
-|=..+++ .|+. ..-.||+.|==+|-..--++||+|||-|
T Consensus 270 ~dl~~~~~~ve~~l~~~~~~l~VAVMGCvVNGPGEak~ADiGIagg 315 (346)
T TIGR00612 270 FDVEKVVRRVQEALFHLKTPLKVAVMGCVVNGPGEAKHADIGISGG 315 (346)
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEEECceecCCchhhccCeeeecC
Confidence 22222333 3333 2568999999999999999999999977
No 260
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.44 E-value=2.1e+02 Score=30.79 Aligned_cols=55 Identities=18% Similarity=0.094 Sum_probs=43.0
Q ss_pred ccCeEEeeeecccCCCcccH---HHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHcCCc
Q 003371 651 EEGLTLLGIVGIKDPCRPGV---QKAVEACQSAGVEIKMI-TGDNVFTAKAIATECGIL 705 (825)
Q Consensus 651 e~~l~llG~v~i~DplR~~v---~~aI~~l~~aGI~V~mv-TGD~~~tA~aIA~~~GI~ 705 (825)
.-+|..+|++++...-.|.. .+.++.+++.|++++.. .+-+...++.+|+++|+-
T Consensus 193 ~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~gv~ 251 (287)
T cd01137 193 AYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVNDRLMKQVAKETGAK 251 (287)
T ss_pred HcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCChHHHHHHHHHhCCc
Confidence 45888899888754444444 67788899999997655 677888999999999984
No 261
>PRK04302 triosephosphate isomerase; Provisional
Probab=21.35 E-value=4.1e+02 Score=27.25 Aligned_cols=97 Identities=22% Similarity=0.190 Sum_probs=52.4
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCcccccccccceeeechhhhcCCHHHHHhhccCeeEEEecCHHH
Q 003371 668 PGVQKAVEACQSAGVEIKMITGDNVFTAKAIATECGILRLDQQVEKGEVVEGVEFRNYTDEERIQKVDKIRVMARSSPFD 747 (825)
Q Consensus 668 ~~v~~aI~~l~~aGI~V~mvTGD~~~tA~aIA~~~GI~~~~~~~~~~~vi~G~~~~~~~~~~~~~~~~~~~V~ar~sP~d 747 (825)
.++.+-++.+++.|+.+++++|+. ..+..++ +.|-. .+.++....... -......+|++
T Consensus 101 ~e~~~~v~~a~~~Gl~~I~~v~~~-~~~~~~~-~~~~~--------~I~~~p~~~igt-----------~~~~~~~~~~~ 159 (223)
T PRK04302 101 ADIEAVVERAKKLGLESVVCVNNP-ETSAAAA-ALGPD--------YVAVEPPELIGT-----------GIPVSKAKPEV 159 (223)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCH-HHHHHHh-cCCCC--------EEEEeCcccccc-----------CCCCCcCCHHH
Confidence 457889999999999999999984 3333332 22210 111111000000 00011245777
Q ss_pred HHHHHHHHHhC-CCEEEEEcCCccCHHHhh---hCC-ccEecC
Q 003371 748 KLLMVQCLKKK-GHVVAVTGDGTNDAPALK---EAD-VGLSMG 785 (825)
Q Consensus 748 K~~lV~~Lq~~-g~vVa~~GDG~NDapALk---~Ad-VGiamg 785 (825)
=..+++.+++. ..+..+.|=|+++....+ +++ =|+.+|
T Consensus 160 i~~~~~~ir~~~~~~pvi~GggI~~~e~~~~~~~~gadGvlVG 202 (223)
T PRK04302 160 VEDAVEAVKKVNPDVKVLCGAGISTGEDVKAALELGADGVLLA 202 (223)
T ss_pred HHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHcCCCCEEEEe
Confidence 77777888763 345556788887654443 333 256565
No 262
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=21.34 E-value=1.2e+02 Score=30.54 Aligned_cols=80 Identities=16% Similarity=0.214 Sum_probs=55.0
Q ss_pred HHhhccCeEEEEEEeecCchhhcccchhHHhhhhhccCeEEeeeecccCCCcccHHHHHHHHHhCCCe--EEEEcCCCHH
Q 003371 616 GMAASSLRCIAFAYKQVSEEETAYNNDVKARQRLKEEGLTLLGIVGIKDPCRPGVQKAVEACQSAGVE--IKMITGDNVF 693 (825)
Q Consensus 616 ~~a~~glR~l~lA~k~l~~~e~~~~~~~~~~~~~~e~~l~llG~v~i~DplR~~v~~aI~~l~~aGI~--V~mvTGD~~~ 693 (825)
-+...|++|+.+.- +++. ++ -.....+.+-.++|+-....+-.+.+++.|+.|+++|.+ +.++=|-...
T Consensus 107 ~l~~~G~~vi~LG~-~vp~------e~--~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~ 177 (197)
T TIGR02370 107 MLRANGFDVIDLGR-DVPI------DT--VVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAPV 177 (197)
T ss_pred HHHhCCcEEEECCC-CCCH------HH--HHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChhc
Confidence 34678999998764 2221 11 112234556778999999999999999999999999875 5444444544
Q ss_pred HHHHHHHHcCCc
Q 003371 694 TAKAIATECGIL 705 (825)
Q Consensus 694 tA~aIA~~~GI~ 705 (825)
+ ...|+++|-.
T Consensus 178 ~-~~~~~~~gad 188 (197)
T TIGR02370 178 T-QDWADKIGAD 188 (197)
T ss_pred C-HHHHHHhCCc
Confidence 4 4688888865
No 263
>PLN03190 aminophospholipid translocase; Provisional
Probab=21.16 E-value=3.6e+02 Score=35.27 Aligned_cols=58 Identities=19% Similarity=0.261 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchh-----CCCeeEE----EeCCEEEEEEecCcccCeEEEeC
Q 003371 201 VAVFLVIVVSAFSNFRQARQFDKLSKIS-----NNIKVEV----VREARRLQISIFDLVVGDIVFLK 258 (825)
Q Consensus 201 ~~v~lv~~v~~~~~~~~~~~~~~l~~~~-----~~~~v~V----~R~g~~~~I~~~dLvvGDIV~l~ 258 (825)
+.+++..+-.++.||++.++.++.+... +.....+ ++-|....+...|.+|-|.+.|.
T Consensus 145 ~vl~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~ 211 (1178)
T PLN03190 145 FVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLS 211 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEe
Confidence 3334445566667776666666654321 1111222 23466677777777777777775
No 264
>PRK10671 copA copper exporting ATPase; Provisional
Probab=20.79 E-value=3.6e+02 Score=33.90 Aligned_cols=159 Identities=15% Similarity=0.140 Sum_probs=80.8
Q ss_pred EeCCEEEEEEecCcccCeEEEeCCCCeeeceEEEEecCcceecCCCCCCCCCeeeecCCCCceeeeCceeeeceEEEEEE
Q 003371 236 VREARRLQISIFDLVVGDIVFLKIGDQIPADGLFLDGHSLQVDESSMTGESDHVEVDSTNNPFLFSGSKVADGYAQMLVV 315 (825)
Q Consensus 236 ~R~g~~~~I~~~dLvvGDIV~l~~Gd~VPaDgili~g~~l~VDES~LTGEs~pv~k~~~~~~~l~sGt~v~~G~~~~~V~ 315 (825)
++-|....|...|.+|-|-+.++ |+ .-+|==.+.|++.-|+-. .|. .|. .+.++..|+....=...+-=+
T Consensus 341 l~~GD~v~v~~G~~iP~Dg~v~~-g~-~~vdeS~lTGEs~pv~k~--~gd--~V~----aGt~~~~G~~~~~v~~~g~~t 410 (834)
T PRK10671 341 VQPGMLLRLTTGDRVPVDGEITQ-GE-AWLDEAMLTGEPIPQQKG--EGD--SVH----AGTVVQDGSVLFRASAVGSHT 410 (834)
T ss_pred cCCCCEEEEcCCCEeeeeEEEEE-ce-EEEeehhhcCCCCCEecC--CCC--EEE----ecceecceeEEEEEEEEcCcC
Confidence 34688889999999999999887 53 557777777777544322 122 222 245556666554432222222
Q ss_pred EEcccchHHHHHhhccCCCCCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCCCcccccCCCCCchh
Q 003371 316 SVGMNTAWGEMMSSISSDSNERTPLQARLDK-LTSTIGKVGLAVAFLVLVVLLA-RYFTGNTKGENGIKEYNGSNTDIDD 393 (825)
Q Consensus 316 ~vG~~T~~g~i~~~~~~~~~~~tplq~~l~~-~a~~i~~~~l~~a~l~~iv~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (825)
..| ++.++++.....+..-..+..++-+ +...+..++++..++.++.... .+..
T Consensus 411 ~l~---~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~~~~~~--------------------- 466 (834)
T PRK10671 411 TLS---RIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGPAPQIVY--------------------- 466 (834)
T ss_pred hHH---HHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHH---------------------
Confidence 222 3334554444333444444444443 4444433343333222221100 0110
Q ss_pred hHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Q 003371 394 VFNAVVSIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKR 431 (825)
Q Consensus 394 ~~~~~~~~~~~av~ilvvavP~~Lplavtl~la~~~~~ 431 (825)
.+...+...+.-.-.+.|.+.|+++..++..+.++
T Consensus 467 ---~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~ 501 (834)
T PRK10671 467 ---TLVIATTVLIIACPCALGLATPMSIISGVGRAAEF 501 (834)
T ss_pred ---HHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHC
Confidence 22223334444456677777788887777765544
No 265
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=20.36 E-value=60 Score=25.44 Aligned_cols=12 Identities=50% Similarity=0.797 Sum_probs=10.1
Q ss_pred ccCeEEEeCCCC
Q 003371 250 VVGDIVFLKIGD 261 (825)
Q Consensus 250 vvGDIV~l~~Gd 261 (825)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999885
No 266
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=20.16 E-value=5.1e+02 Score=26.06 Aligned_cols=16 Identities=25% Similarity=0.023 Sum_probs=12.4
Q ss_pred CHHHHHHHHHHcCCcc
Q 003371 691 NVFTAKAIATECGILR 706 (825)
Q Consensus 691 ~~~tA~aIA~~~GI~~ 706 (825)
+...++.+|+.+||.-
T Consensus 46 ~~e~~~~~A~~lgipl 61 (194)
T cd01994 46 NHELLELQAEAMGIPL 61 (194)
T ss_pred CHHHHHHHHHHcCCcE
Confidence 6678888888888853
No 267
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.16 E-value=4.5e+02 Score=28.52 Aligned_cols=62 Identities=18% Similarity=0.308 Sum_probs=36.5
Q ss_pred EEecCHHHHHHHHHHHHh--CCCEEEEEcCCcc-CHH---Hhh------hCCccEecCCCchH--HHHHhcCeeecc
Q 003371 740 MARSSPFDKLLMVQCLKK--KGHVVAVTGDGTN-DAP---ALK------EADVGLSMGIQGTE--VAKESSDIVILD 802 (825)
Q Consensus 740 ~ar~sP~dK~~lV~~Lq~--~g~vVa~~GDG~N-Dap---ALk------~AdVGiamg~~gt~--vAk~aaDivlld 802 (825)
|.=|||.-=.++++...- .|..|+++|-+.. =-| +|. .|.|-+... ...+ -+-..|||++.-
T Consensus 138 ~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 138 FVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIAA 213 (295)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 555777755555544432 3899999999754 222 343 366666654 2222 244679998853
Done!