Query 003372
Match_columns 825
No_of_seqs 450 out of 2777
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 23:03:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hpp_A Probable glutamine synt 100.0 3.5E-96 1E-100 826.2 39.8 406 406-825 5-443 (443)
2 3qaj_A Glutamine synthetase; A 100.0 3.1E-96 1E-100 827.9 36.2 402 399-820 10-437 (444)
3 3ng0_A Glutamine synthetase; G 100.0 5.1E-93 1.8E-97 809.5 41.3 404 399-820 9-467 (473)
4 4acf_A Glutamine synthetase 1; 100.0 1.1E-89 3.8E-94 787.1 43.9 403 403-820 21-480 (486)
5 1f52_A Glutamine synthetase; A 100.0 2.8E-88 9.6E-93 771.3 42.2 402 400-820 7-462 (468)
6 2j9i_A Glutamate-ammonia ligas 100.0 3.8E-83 1.3E-87 718.5 18.3 382 400-820 7-413 (421)
7 3fky_A Glutamine synthetase; b 100.0 1.1E-69 3.7E-74 599.1 23.4 325 404-750 19-358 (370)
8 2ojw_A Glutamine synthetase; a 100.0 6.7E-69 2.3E-73 595.6 24.3 330 398-747 33-381 (384)
9 2d3a_A Glutamine synthetase; l 100.0 2.1E-66 7.3E-71 570.7 24.7 322 405-747 15-354 (356)
10 2qpx_A Predicted metal-depende 100.0 5.5E-57 1.9E-61 504.0 18.8 362 3-383 2-373 (376)
11 1j5s_A Uronate isomerase; TM00 100.0 4.9E-54 1.7E-58 480.0 21.6 360 4-379 27-462 (463)
12 3iac_A Glucuronate isomerase; 100.0 1.8E-52 6.2E-57 461.7 24.3 362 4-381 20-473 (473)
13 2q01_A Uronate isomerase; stru 100.0 9.8E-52 3.4E-56 465.1 28.1 364 4-386 26-478 (497)
14 3o6x_A Glutamine synthetase; t 100.0 1.4E-51 4.7E-56 473.6 15.8 270 466-753 143-506 (729)
15 2qee_A BH0493 protein; amidohy 100.0 1.1E-36 3.8E-41 334.5 15.6 336 4-385 13-421 (437)
16 3irs_A Uncharacterized protein 99.8 1.2E-18 4.3E-23 187.5 14.9 189 161-383 88-283 (291)
17 3ij6_A Uncharacterized metal-d 99.7 5.1E-17 1.8E-21 176.6 16.5 190 158-381 89-306 (312)
18 4inf_A Metal-dependent hydrola 99.7 4.6E-17 1.6E-21 180.9 12.3 187 157-380 138-373 (373)
19 3nur_A Amidohydrolase; TIM bar 99.7 5.5E-17 1.9E-21 179.4 8.2 189 157-382 120-355 (357)
20 3cjp_A Predicted amidohydrolas 99.6 3.4E-15 1.2E-19 158.6 17.1 180 160-383 82-267 (272)
21 2dvt_A Thermophilic reversible 99.6 2.2E-15 7.5E-20 164.1 13.3 186 159-381 88-325 (327)
22 2ffi_A 2-pyrone-4,6-dicarboxyl 99.6 9.9E-15 3.4E-19 156.2 15.4 186 161-384 78-283 (288)
23 2wm1_A 2-amino-3-carboxymucona 99.6 9.8E-15 3.4E-19 160.0 13.7 188 160-383 105-333 (336)
24 2f6k_A Metal-dependent hydrola 99.6 9.2E-15 3.1E-19 157.7 12.8 188 160-380 85-307 (307)
25 4do7_A Amidohydrolase 2; enzym 99.6 1.6E-14 5.6E-19 156.2 14.2 151 210-384 118-292 (303)
26 4i6k_A Amidohydrolase family p 99.6 8.3E-15 2.8E-19 157.8 11.6 183 161-382 91-293 (294)
27 4d9a_A 2-pyrone-4,6-dicarbaxyl 99.6 6.3E-15 2.2E-19 159.4 10.1 185 159-382 90-294 (303)
28 2hbv_A 2-amino-3-carboxymucona 99.5 2.4E-14 8.3E-19 156.8 14.4 185 160-381 109-333 (334)
29 2gwg_A 4-oxalomesaconate hydra 99.5 5.4E-14 1.8E-18 155.1 11.4 191 160-380 101-332 (350)
30 4dzi_A Putative TIM-barrel met 99.5 2E-13 7E-18 153.9 12.8 190 156-384 151-399 (423)
31 2gzx_A Putative TATD related D 99.2 3.2E-11 1.1E-15 127.0 11.2 147 209-381 104-256 (265)
32 1j6o_A TATD-related deoxyribon 99.2 4.2E-11 1.4E-15 126.9 10.3 146 209-381 115-266 (268)
33 1yix_A Deoxyribonuclease YCFH; 99.0 5.7E-10 2E-14 117.4 9.7 147 209-382 106-258 (265)
34 1zzm_A Putative deoxyribonucle 98.8 1.1E-08 3.7E-13 107.4 9.9 145 210-381 110-259 (259)
35 1xwy_A DNAse TATD, deoxyribonu 98.8 1.3E-08 4.6E-13 107.0 9.1 145 210-381 108-263 (264)
36 2y1h_A Putative deoxyribonucle 98.6 3.3E-07 1.1E-11 96.8 15.6 142 211-381 123-266 (272)
37 2xio_A Putative deoxyribonucle 98.3 4.3E-06 1.5E-10 89.9 13.9 141 212-381 125-293 (301)
38 1bf6_A Phosphotriesterase homo 98.3 5.4E-06 1.9E-10 87.9 13.6 146 215-379 139-291 (291)
39 3rcm_A TATD family hydrolase; 98.3 2.5E-06 8.4E-11 91.1 10.5 151 213-390 113-274 (287)
40 3ovg_A Amidohydrolase; structu 98.1 3.3E-05 1.1E-09 84.9 15.0 155 215-383 170-333 (363)
41 2vc7_A Aryldialkylphosphatase; 98.1 2E-05 6.7E-10 84.8 12.3 148 215-379 152-314 (314)
42 3gg7_A Uncharacterized metallo 98.0 1.1E-05 3.6E-10 84.5 9.0 143 213-383 103-247 (254)
43 3k2g_A Resiniferatoxin-binding 97.9 0.0001 3.5E-09 81.2 13.9 149 216-383 192-357 (364)
44 3pnz_A Phosphotriesterase fami 97.8 0.00018 6.2E-09 78.1 15.2 151 216-381 170-329 (330)
45 3rhg_A Putative phophotriester 97.7 0.00018 6E-09 79.3 13.0 154 216-384 181-348 (365)
46 3gtx_A Organophosphorus hydrol 97.7 0.00015 5.3E-09 79.0 12.1 149 216-379 175-339 (339)
47 3tn4_A Phosphotriesterase; lac 97.7 0.0006 2.1E-08 74.8 16.6 153 214-379 193-359 (360)
48 2ob3_A Parathion hydrolase; me 97.6 0.00028 9.4E-09 76.7 12.6 148 216-379 150-325 (330)
49 3guw_A Uncharacterized protein 97.6 2.3E-05 7.9E-10 82.4 3.3 138 215-383 111-251 (261)
50 1r8g_A Hypothetical protein YB 97.1 0.0059 2E-07 67.3 14.7 126 524-679 11-169 (372)
51 3ipw_A Hydrolase TATD family p 97.0 0.0016 5.5E-08 70.3 9.2 139 215-381 155-323 (325)
52 2z26_A Dihydroorotase, dhoase; 96.0 0.0052 1.8E-07 67.0 5.1 79 213-295 119-201 (347)
53 2i5g_A Amidohydrolase; NYSGXRC 95.9 0.028 9.7E-07 60.5 10.6 67 301-379 225-320 (325)
54 3e2v_A 3'-5'-exonuclease; stru 95.8 0.079 2.7E-06 58.5 13.8 96 215-328 180-306 (401)
55 2gwd_A Glutamate cysteine liga 92.3 0.16 5.4E-06 57.3 6.6 43 585-628 91-134 (449)
56 3id7_A Dipeptidase; streptomyc 91.3 0.6 2.1E-05 51.5 9.6 70 301-380 296-368 (400)
57 3ly0_A Dipeptidase AC. metallo 91.2 0.91 3.1E-05 49.3 10.8 70 301-380 282-353 (364)
58 3b40_A PVDM, probable dipeptid 91.2 0.8 2.7E-05 50.8 10.6 70 301-380 335-406 (417)
59 1itu_A Renal dipeptidase; glyc 91.2 0.73 2.5E-05 50.3 10.1 70 301-380 264-336 (369)
60 3neh_A Renal dipeptidase famil 89.8 1.8 6E-05 46.3 11.3 70 301-381 239-311 (318)
61 2rag_A Dipeptidase; aminohydro 89.1 1.7 5.9E-05 48.2 10.9 69 301-379 336-406 (417)
62 3pnu_A Dihydroorotase; TIM bar 88.4 2.6 8.8E-05 45.8 11.7 75 212-294 134-211 (359)
63 2vun_A Enamidase; nicotinate d 87.4 10 0.00036 40.6 16.0 144 212-380 172-320 (386)
64 3gnh_A L-lysine, L-arginine ca 82.5 30 0.001 37.0 16.9 139 211-384 204-362 (403)
65 2z00_A Dihydroorotase; zinc bi 82.4 5.1 0.00018 43.7 10.6 24 213-236 154-177 (426)
66 3hm7_A Allantoinase; metallo-d 80.8 5.9 0.0002 43.8 10.5 166 213-384 168-381 (448)
67 3mpg_A Dihydroorotase, dhoase; 71.7 13 0.00045 40.7 10.0 162 213-381 158-364 (428)
68 3gri_A Dihydroorotase, dhoase; 71.6 8.3 0.00028 42.4 8.3 163 213-381 157-363 (424)
69 3e74_A Allantoinase; (beta/alp 69.1 21 0.0007 40.0 11.0 162 213-381 186-395 (473)
70 3nqb_A Adenine deaminase 2; PS 66.0 51 0.0017 38.2 13.7 136 212-381 200-337 (608)
71 4f0r_A 5-methylthioadenosine/S 63.6 19 0.00066 39.4 9.2 159 212-385 198-362 (447)
72 2ics_A Adenine deaminase; TIM 63.6 43 0.0015 35.4 11.9 136 216-382 170-319 (379)
73 1nxi_A Conserved hypothetical 58.5 22 0.00077 32.6 7.1 91 510-627 21-114 (132)
74 4aql_A Guanine deaminase; hydr 53.8 88 0.003 34.7 12.6 159 212-384 241-408 (476)
75 3sfw_A Dihydropyrimidinase; hy 53.0 1.1E+02 0.0037 33.7 13.1 164 213-383 163-381 (461)
76 2qs8_A XAA-Pro dipeptidase; am 50.8 1.6E+02 0.0056 31.4 14.0 138 212-384 214-372 (418)
77 3gip_A N-acyl-D-glutamate deac 49.8 1.1E+02 0.0037 34.0 12.5 58 318-382 358-416 (480)
78 3dc8_A Dihydropyrimidinase; TI 49.6 1.1E+02 0.0037 34.2 12.5 158 215-383 162-378 (490)
79 4dyk_A Amidohydrolase; adenosi 48.5 2.4E+02 0.0081 30.4 14.9 157 214-385 202-364 (451)
80 3feq_A Putative amidohydrolase 47.8 1.3E+02 0.0045 32.0 12.5 25 211-235 209-233 (423)
81 4dzh_A Amidohydrolase; adenosi 46.9 2.5E+02 0.0087 30.6 15.0 155 215-385 210-371 (472)
82 3lnp_A Amidohydrolase family p 46.8 2E+02 0.0067 31.3 14.0 155 215-384 228-388 (468)
83 3be7_A Zn-dependent arginine c 45.9 1.5E+02 0.005 31.6 12.5 134 213-381 205-358 (408)
84 3ln6_A Glutathione biosynthesi 43.8 1.2E+02 0.004 36.1 12.0 103 584-686 54-203 (750)
85 1zpv_A ACT domain protein; str 43.1 12 0.00041 31.3 2.4 69 566-636 17-86 (91)
86 2fty_A Dihydropyrimidinase; al 41.7 80 0.0027 36.0 9.9 34 345-382 401-435 (559)
87 2r8c_A Putative amidohydrolase 40.7 3.6E+02 0.012 28.7 14.9 25 211-235 212-236 (426)
88 3h4u_A Amidohydrolase; signatu 36.5 67 0.0023 35.3 8.0 153 214-382 240-398 (479)
89 1xrt_A Dihydroorotase, dhoase; 36.0 1.6E+02 0.0056 32.1 11.1 25 212-236 204-228 (467)
90 2ood_A BLR3880 protein; PSI-II 33.2 1.8E+02 0.0061 32.0 10.8 25 212-236 212-237 (475)
91 4gxw_A Adenosine deaminase; am 32.4 56 0.0019 35.5 6.2 84 147-236 129-219 (380)
92 3ooq_A Amidohydrolase; structu 31.4 1.3E+02 0.0044 32.1 9.1 135 220-384 213-350 (396)
93 1rk6_A D-aminoacylase; TIM bar 28.6 1.6E+02 0.0054 32.6 9.4 56 319-381 373-429 (496)
94 3rys_A Adenosine deaminase 1; 26.2 74 0.0025 34.0 5.7 158 147-331 113-286 (343)
95 3g8r_A Probable spore coat pol 25.7 66 0.0022 34.5 5.1 69 217-294 125-201 (350)
96 1v5s_A MAP/microtubule affinit 25.4 2.1E+02 0.0073 25.8 7.7 69 558-626 33-120 (126)
97 2paj_A Putative cytosine/guani 23.6 2.7E+02 0.0094 30.3 10.2 107 212-326 227-337 (492)
98 3ose_A Serine/threonine-protei 23.3 64 0.0022 29.0 3.8 66 561-626 36-120 (120)
99 1gkp_A Hydantoinase; hydrolase 23.3 6.9E+02 0.024 26.5 14.0 23 213-235 162-184 (458)
100 3ls9_A Triazine hydrolase; atr 22.8 5.9E+02 0.02 27.1 12.6 68 213-284 218-289 (456)
101 1gkr_A Hydantoinase, non-ATP d 20.9 7.2E+02 0.025 26.3 12.8 35 345-383 343-377 (458)
No 1
>4hpp_A Probable glutamine synthetase; glutamine synthase homolog, glutamate, polyamine, ligase; HET: GLU; 2.50A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.5e-96 Score=826.19 Aligned_cols=406 Identities=29% Similarity=0.454 Sum_probs=358.7
Q ss_pred CCceEEEEEEecCCCCceeEEeechhhhhHHhhccccccccccccccccCCCCCCCCCCCCCcEEEEEecCCcEeccCCC
Q 003372 406 SDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIPWQK 485 (825)
Q Consensus 406 ~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~L~PD~sT~~~~p~~~ 485 (825)
++|+||+++|+|++|++|+|.||+++|.+. .++|++|+.+.+.++.+ +.+..++++++++|++|+||++|++++||.+
T Consensus 5 ~~v~~v~l~~~D~~G~~r~k~vp~~~~~~~-~~~G~~f~~s~~~~~~~-~~~~~~~~~~~~~D~~l~PD~~T~~~~Pw~~ 82 (443)
T 4hpp_A 5 QPVRLVSFVTTDLAGITRGRSLPLATLEEQ-LASGCGWVPANSSLTPQ-DLIDESSPWGSHGDLRLLPDPNSRVRVEQGP 82 (443)
T ss_dssp CCCCEEEEEEECTTSCEEEEEEEGGGHHHH-HTTCEEECGGGGGCCTT-SCCCTTCSCSSSCCEEEEECGGGCEEECCCS
T ss_pred CCCCEEEEEEECCCCCEEEEEEEHHHHHHH-HhCCcccCchhheeecc-CccccccCCCCCCCEEEEEcccceEECCccc
Confidence 579999999999999999999999999886 47899999987777653 4444444567889999999999999999998
Q ss_pred -----cccceeEEEEcCCCCcCCCChHHHHHHHHHHHHHhcCceEEEeeeeEEEEEeecccCCCCCCccCCCCCcCcCCc
Q 003372 486 -----QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAA 560 (825)
Q Consensus 486 -----~~a~v~~~~~~~~g~p~~~~pR~~L~~~~~~~~~~~g~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~ 560 (825)
++++|+||+++.||+|++.|||++|||++++++ +.|+++++|+|+|||||+. .|.++++||+..+
T Consensus 83 ~~~~~~~a~v~cd~~~~dG~p~~~~pR~~L~r~~~~~~-~~G~~~~~g~E~EF~l~~~---------~p~~~~~~y~~~~ 152 (443)
T 4hpp_A 83 DAAAPALDYLHGNLVETDGTPWPACPRSLLRAEVERYR-DSGLQVIAAFEHEFSLLGL---------PGERPAAAFSLQA 152 (443)
T ss_dssp STTSCCEEEEEEEEECTTSCBCTTCHHHHHHHHHHHHH-HTTEEEEEEEEEEEEEECC---------CSSSCCCTTCHHH
T ss_pred ccCCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHH-HcCCeEEEEeeeEEEEecc---------ccCCCCccCCCCc
Confidence 789999999999999999999999999999998 6899999999999999963 3556778998888
Q ss_pred cCCchHHHHHHHHHHHhCCCCeeeeecCCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHCCCeEEeccc-------
Q 003372 561 YDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPN------- 633 (825)
Q Consensus 561 ~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~i~~iA~~~Gl~AtF~pK------- 633 (825)
.+...+++++|+++|+++||+|+++|+|+|||||||++.|.+++++||+++++|++||+||++||+.||||||
T Consensus 153 ~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~G 232 (443)
T 4hpp_A 153 QRAAGQFPGWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAVT 232 (443)
T ss_dssp HHHTTTHHHHHHHHHHHTTCCEEEEEECSSTTEEEEEECCEETHHHHHHHHHHHHHHHHHHHHHTCEEECSSSSSTTCCC
T ss_pred ccchHHHHHHHHHHHHHCCCCeEEeecCCCCCceEEEecCCcHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCCCCc
Confidence 7888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --------ccC-CCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHhhhCCCCCCccCCCCCCcCCcccccccCCCCC
Q 003372 634 --------LWQ-NGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQPNTWSGAYQCWGKENREA 704 (825)
Q Consensus 634 --------l~~-~g~n~f~~~~~~~~~~ls~~~~~fiaGil~h~~al~a~~~P~~nSY~Rl~~g~~ap~~~~WG~~NR~a 704 (825)
+|+ +|+|+|. +++++.+||+++++||||||+|++++++|++||+||||||+||+|||++++||.+||++
T Consensus 233 sG~H~h~Sl~~~~G~n~f~--~~~~~~~lS~~~~~fiaGll~h~~~l~a~~~P~~NSYkRL~pg~~AP~~~~WG~~NRsa 310 (443)
T 4hpp_A 233 NGVHLHLSLQHADGSPLLY--EPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACLGLRNREA 310 (443)
T ss_dssp CCEEEEEEEEETTSCBSSB--CTTSGGGBCHHHHHHHHHHHHHHHHHHHHHSCSGGGHHHHSCSTTCCCBCCEESSCTTS
T ss_pred ccceeeeeeecCCCCcccc--CCCCccchhHHHHHHHHHHHHHHHHHHHHhCCCCcchhccCCCCcCCCcceeccCCCce
Confidence 454 4688888 55566789999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCC---CCCCCCcceEEecCCCCCCChHHHHHHHHHHHHHHHhc-cCCCCCCCCCcccccC------CCCCCCcC
Q 003372 705 PLRTACPP---GVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCLPEPIDANPASLDG------KLQRLPTS 774 (825)
Q Consensus 705 ~iRv~~~~---~~~~~~~~~~E~R~~d~~aNPYL~lAailaAgl~Gi~~-l~~~~~~~~~~~~~~~------~~~~LP~s 774 (825)
+||||... +.+...++|||+|++|++|||||++||+|+||++||++ ++|++|+++|+|+++. ++++||+|
T Consensus 311 ~iRip~~~~~~~~~~~~~~riE~R~pd~~aNPYLa~AaiLaAGl~GI~~~l~p~~p~~~~~y~~~~~e~~~~~i~~LP~s 390 (443)
T 4hpp_A 311 ALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIERRLPLRALADVDPHGLSDEERQARGIQALPAT 390 (443)
T ss_dssp SEEEECCCCSSSCCSSTTCEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTCCCC-----------------CCCCBCCSS
T ss_pred eEEeccccccCCCccccccEEEEcCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCCccCCChhhCCHHHHhhhccccCCCC
Confidence 99999732 11002467999999999999999999999999999999 9999999999987652 56789999
Q ss_pred HHHHHHHHhcCcHHHhhhhHHHHHHHHHHHHHHHHHHhcCCChHH--HHHhhC
Q 003372 775 LSESVQALEKDDILRDMIGEKLLIAIKGIRKAEINYYSLNKDAYK--QLIHRY 825 (825)
Q Consensus 775 l~eAl~~l~~d~~l~~~lG~~~v~~y~~~k~~E~~~~~~~~~~~~--~~~~ry 825 (825)
|.|||++|++|++++++||++|++.|+++|++||+.|...+++|+ +..++|
T Consensus 391 L~eAl~~l~~d~~~~~~lG~~~v~~y~~~K~~E~~~~~~~vt~~E~~~yl~~y 443 (443)
T 4hpp_A 391 LGDALDCLQRDEALCAELPKPLLDTYLAMKRHELALTAGLSDDDLCRHYAELY 443 (443)
T ss_dssp HHHHHHHHHTCHHHHTTSCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTTC
T ss_pred HHHHHHHHhcChHHhHhccHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999885 466666
No 2
>3qaj_A Glutamine synthetase; AMP-PCP, ACP, ligase; HET: GLU ADP RGP CIT AMP; 3.05A {Bacillus subtilis}
Probab=100.00 E-value=3.1e-96 Score=827.91 Aligned_cols=402 Identities=27% Similarity=0.484 Sum_probs=364.9
Q ss_pred hhhhhccCCceEEEEEEecCCCCceeEEeechhhhhHHhhccccccccccccccccCCCCCCCCCCCCCcEEEEEecCCc
Q 003372 399 KKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTR 478 (825)
Q Consensus 399 ~~~~~~~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~L~PD~sT~ 478 (825)
.+++.+ .+|+||+++|+|++|++|+|.||+++|.+. .++|++|++++.. +.. -.+.+|++|+||++|+
T Consensus 10 ~~~~~~-~~i~~v~l~~~D~~G~~r~k~ip~~~~~~~-~~~G~~fdgssi~------g~~----~~~~~D~~l~PD~~T~ 77 (444)
T 3qaj_A 10 EKLVKE-ENVKYIRLQFTDILGTIKNVEIPVSQLGKA-LDNKVMFDGSSIE------GFV----RIEESDMYLYPDLNTF 77 (444)
T ss_dssp HHHHHH-HTCCEEEEEEECSSSCEEEEEEEGGGHHHH-HTTCCEEETTTST------TSS----CTTCCEEECCBCGGGC
T ss_pred HHHHHh-CCCCEEEEEEECCCCCEEEEEEeHHHHHHH-HhCCccccCcccc------Ccc----CCCCCCEEEEEecCce
Confidence 345544 499999999999999999999999999875 4789998776531 111 1256899999999999
Q ss_pred EeccCCCc---ccceeEEEEcCCCCcCCCChHHHHHHHHHHHHHhcCce-EEEeeeeEEEEEeecccCCCCCCccCCCCC
Q 003372 479 WRIPWQKQ---EEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLV-LNAGFEIEFYLLKSVLREGKEEWVPIDFTP 554 (825)
Q Consensus 479 ~~~p~~~~---~a~v~~~~~~~~g~p~~~~pR~~L~~~~~~~~~~~g~~-~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~ 554 (825)
+++||.++ +++|+||++++||+|++.|||++|||++++++ +.|++ +.+|+|+|||||+.. .+|.+...+.++++
T Consensus 78 ~~~Pw~~~~~~~a~v~cd~~~~dG~p~~~~pR~iLkr~~~~~~-~~G~~~~~~g~E~EF~l~~~~-~~g~~~~~~~~~~~ 155 (444)
T 3qaj_A 78 VIFPWTAEKGKVARFICDIYNPDGTPFEGDPRNNLKRILKEME-DLGFSDFNLGPEPEFFLFKLD-EKGEPTLELNDKGG 155 (444)
T ss_dssp EEEHHHHHHHCEEEEEBCCBCTTSCBCSSCHHHHHHHHHHHHH-TTTCCEEEEEEEECEEEEEEC-SSSCEEEEESCCCC
T ss_pred EECccccCCCCeEEEEEEEECCCCCCCCCChHHHHHHHHHHHH-HcCCCeeeEEeceEEEEEecC-CCCCCCCcCcCCCC
Confidence 99999876 89999999999999999999999999999998 58999 999999999999973 23433445667888
Q ss_pred cCcCCccCCchHHHHHHHHHHHhCCCCeeeeecCCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHCCCeEEeccc-
Q 003372 555 YCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPN- 633 (825)
Q Consensus 555 ~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~i~~iA~~~Gl~AtF~pK- 633 (825)
||+..+.+...+++++|+++|+++||+|+++|+|+|||||||++.|++++++||+++++|++||+||++||+.||||||
T Consensus 156 y~~~~~~d~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP 235 (444)
T 3qaj_A 156 YFDLAPTDLGENCRRDIVLELEEMGFEIEASHHEVAPGQHEIDFKYAGAVRSCDDIQTFKLVVKTIARKHGLHATFMPKP 235 (444)
T ss_dssp TTCCTTTSCCTTHHHHHHHHHHTTTCCEEEEEECSSTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTEEEECCSCS
T ss_pred ccccCCCcchHHHHHHHHHHHHHCCCCeEEeEcCcCCCcEEEecCCChHHHHHHHHHHHHHHHHHHHHHcCCEEEEcCCc
Confidence 9998888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --------------ccCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHhhhCCCCCCccCCCCCCcCCccccccc
Q 003372 634 --------------LWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQPNTWSGAYQCWGK 699 (825)
Q Consensus 634 --------------l~~~g~n~f~~~~~~~~~~ls~~~~~fiaGil~h~~al~a~~~P~~nSY~Rl~~g~~ap~~~~WG~ 699 (825)
+|++|+|+|. +++++.+||+++++||||||+|++++++|++||+||||||+||+|||++++||.
T Consensus 236 ~~~~~GsG~H~H~Sl~~~g~n~f~--~~~~~~~lS~~~~~fiaGlL~h~~~l~a~~~PtvNSYkRl~pg~~AP~~~~Wg~ 313 (444)
T 3qaj_A 236 LFGVNGSGMHCNLSLFKNGVNAFF--DENADLQLSETAKHFIAGIVKHATSFTAVTNPTVNSYKRLVPGYEAPCYVAWSA 313 (444)
T ss_dssp STTSCCCCEEEEEEEEETTEETTC--CTTSSSSCCHHHHHHHHHHHHTHHHHHHHHSCSSTHHHHSCTTSSSSCBCCEES
T ss_pred CCCCCCCcceeeeccccCCCcccC--CCCcccchHHHHHHHHHHHHHHHHHHHHHHCCCCcccccCCCCCcCCCcceeec
Confidence 5677889998 556677899999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccCCCCCCCCCcceEEecCCCCCCChHHHHHHHHHHHHHHHhc-cCCCCCCCCCcccccC------CCCCCC
Q 003372 700 ENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCLPEPIDANPASLDG------KLQRLP 772 (825)
Q Consensus 700 ~NR~a~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAgl~Gi~~-l~~~~~~~~~~~~~~~------~~~~LP 772 (825)
+||+++||||... +..+|||+|++|++|||||++||+|+||++||++ ++|++|+++|+|+++. +.+.||
T Consensus 314 ~NRsa~iRip~~~----~~~~RiE~R~pd~~aNPYLa~Aa~LaAGldGI~~~l~p~~p~~~n~y~~~~~e~~~~~~~~LP 389 (444)
T 3qaj_A 314 QNRSPLIRIPASR----GISTRVEVRSVDPAANPYLALSVLLAAGLDGIKNKLEAPAPIDRNIYVMSKEERMENGIVDLP 389 (444)
T ss_dssp SCSSSSEECCSCC----GGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCCCCCCSCGGGSCTTTTTTTTCCBCC
T ss_pred CCCcceEeeccCC----CCCceEEecCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCcCCChhhCCHHHHHhhccCCCC
Confidence 9999999999622 2457999999999999999999999999999999 9999999999997653 566899
Q ss_pred cCHHHHHHHHhcCcHHHhhhhHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 003372 773 TSLSESVQALEKDDILRDMIGEKLLIAIKGIRKAEINYYSLNKDAYKQ 820 (825)
Q Consensus 773 ~sl~eAl~~l~~d~~l~~~lG~~~v~~y~~~k~~E~~~~~~~~~~~~~ 820 (825)
+||.|||++|++|++++++||++|++.|+++|++||+.|...+++|+.
T Consensus 390 ~sL~eAl~~l~~d~~l~~~lG~~~v~~y~~~K~~E~~~~~~~vt~wE~ 437 (444)
T 3qaj_A 390 ATLAEALEEFKSNEVMVKALGEHLFEHFIEAKEIEWDMFRTQVHPWER 437 (444)
T ss_dssp SSHHHHHHHHHTCHHHHHHHCTTTTHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred CCHHHHHHHHhCCcHHHHhcCHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 999999999999999999999999999999999999999999999975
No 3
>3ng0_A Glutamine synthetase; GSI, nitrogen metabolism, synec ligase; HET: ANP; 2.80A {Synechocystis SP}
Probab=100.00 E-value=5.1e-93 Score=809.52 Aligned_cols=404 Identities=25% Similarity=0.423 Sum_probs=355.2
Q ss_pred hhhhhccCCceEEEEEEecCCCCceeEEeechhhhhHHhhcccccccccc-ccccccCCCCCCCCCCCCCcEEEEEecCC
Q 003372 399 KKSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLST 477 (825)
Q Consensus 399 ~~~~~~~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~~d~~L~PD~sT 477 (825)
.+++. +.+|+||+++|+|++|++|+|.||+++|.+.++++|++|+++++ ++. -.+.+|++|+||++|
T Consensus 9 ~~~~~-~~~i~~V~l~f~D~~G~~r~k~ip~~~~~~~~~~~G~~fdgss~~g~~-----------~~~~sD~~l~PD~~T 76 (473)
T 3ng0_A 9 LKWIQ-DENIKIIDLKFIDTPGIWQHCSFYYDQLDENSFTEGIPFDGSSIRGWK-----------AINESDMCMVPDPNT 76 (473)
T ss_dssp HHHHH-HTTCCEEEEEEECSSSCEEEEEEEGGGCCGGGGTTCEEEETTSSTTSC-----------CGGGCEEEEEECGGG
T ss_pred HHHHH-hCCCCEEEEEEECCCCCEEEEEEeHHHHHHHHHhCCCccccccccccc-----------cCCCCcEEEEeecCc
Confidence 34444 55999999999999999999999999998844578999887664 211 124689999999999
Q ss_pred cEeccCCCc-ccceeEEEEcC-CCCcCCCChHHHHHHHHHHHHHhcCc--eEEEeeeeEEEEEeeccc------------
Q 003372 478 RWRIPWQKQ-EEMIMADMHLK-PGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVLR------------ 541 (825)
Q Consensus 478 ~~~~p~~~~-~a~v~~~~~~~-~g~p~~~~pR~~L~~~~~~~~~~~g~--~~~~g~E~EF~l~~~~~~------------ 541 (825)
++++||.++ +++|+||++++ +|+|++.|||++|||+++++++ .|+ ++.+|+|+|||||++...
T Consensus 77 ~~~~Pw~~~~~a~v~cd~~~~~~g~p~~~~pR~iLkr~~~~~~~-~G~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~ 155 (473)
T 3ng0_A 77 ATIDPFCKEPTLSMICSIKEPRTGEWYNRDPRTIAAKAAEYLRG-TGIADTVYFGPEAEFFLFDDIRFGQTENSSYYFAD 155 (473)
T ss_dssp CEECTTCSSCEEEEEEEEECTTTSSBCTTCHHHHHHHHHHHHHH-HTSCSEEEEEEEECEEEESEEEEEECSSCEEEEEE
T ss_pred cEECCcCCCCcEEEEEEEeECCCCCCCCCChHHHHHHHHHHHHH-cCCCcceEEEeeeEEEEEeeccccccccccccccc
Confidence 999999986 89999999998 9999999999999999999985 565 899999999999985210
Q ss_pred --C-----------CCCCCccCCCCCcCcCCccCCchHHHHHHHHHHHhCCCCeeeeecCCC-CCceEEecCcChHHHHH
Q 003372 542 --E-----------GKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAG-KGQFEIALGHTVAAKAA 607 (825)
Q Consensus 542 --~-----------~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~-pGQ~Ei~l~~~~~l~aa 607 (825)
. +..++.|.++++|++..+.+...+++++|+++|+++||+||++|+|+| ||||||++.|++++++|
T Consensus 156 ~~~~~~~~~~~~~~~~~g~~~~~~~~y~~~~~~d~~~~~~~~i~~~l~~~Gi~ve~~h~E~~~pGQ~Ei~~~~~~~l~aA 235 (473)
T 3ng0_A 156 SVEGRWNTGREEEGGNLGYKPGYKQGYFPVAPTDTAQDIRTEMLLTMAAFGVPIEKHHHEVASGGQNELGIKFDKLVNSA 235 (473)
T ss_dssp CTTCGGGTTCCCTTCCCCCCCCTTCCSSCCTTTCCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHH
T ss_pred ccccccccccccccCCCCcccCCCccccccCccchhHHHHHHHHHHHHHCCCCeEEeecCcCCCCceEEEccCCCHHHHH
Confidence 0 001234455678888888888999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCeEEeccc---------------ccCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHHH
Q 003372 608 DNLIFTREVLRAVARKHGLLATFVPN---------------LWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSIL 672 (825)
Q Consensus 608 D~~~~~r~~i~~iA~~~Gl~AtF~pK---------------l~~~g~n~f~~~~~~~~~~ls~~~~~fiaGil~h~~al~ 672 (825)
|+++++|++||+||++||+.|||||| +|++|+|+|. +++ ..+||+++++||||||+|+++++
T Consensus 236 D~~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~GSG~H~H~Sl~~~g~n~F~--~~~-~~~lS~~~~~fiaGlL~h~~~l~ 312 (473)
T 3ng0_A 236 DNLMIYKYVIKNVAKKYGKTVTFMPKPIFNDNGSGMHVHQSLWKDGQPLFA--GDK-YAGFSQMGLWYIGGILKHAPALL 312 (473)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEETTB--SSS-GGGBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCEEEEcCcccCCCCCCeeEEEEeeccCCccccC--CCC-ccchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 5667888887 333 56899999999999999999999
Q ss_pred hhhCCCCCCccCCCCCCcCCcccccccCCCCCcccccCCCCCCCCCcceEEecCCCCCCChHHHHHHHHHHHHHHHhc-c
Q 003372 673 AFTAPVPNSYDRIQPNTWSGAYQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-L 751 (825)
Q Consensus 673 a~~~P~~nSY~Rl~~g~~ap~~~~WG~~NR~a~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAgl~Gi~~-l 751 (825)
||++||+||||||+||+|||++++||.+||+++||||.. ..++..+|||+|++|++|||||++||+|+|||+||++ +
T Consensus 313 a~~~Pt~NSYkRL~pg~~AP~~~~Wg~~NRsa~iRip~~--~~~~~~~RiE~R~pd~~aNPYLa~Aa~LaAGldGI~~~l 390 (473)
T 3ng0_A 313 AFTNPTTNSYKRLVPGFEAPVNLAYSQGNRSASVRIPLS--GGNPKAKRLEFRCPDATSNPYLAFAAMLCAGIDGIKNQI 390 (473)
T ss_dssp HHHSCSTTHHHHBBTTTBCCCBCCEEESCTTSSEEECCC--SSCGGGCCEEECSCCTTSCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhCCCcchhhcccCCCcCccceeeeccCCcCceeeecc--CCCCCcceEEeecCCCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999962 1223468999999999999999999999999999999 9
Q ss_pred CCCCCCCCCcccccC----CCCCCCcCHHHHHHHHhcCc-HHH--hhhhHHHHHHHHHHHHH-HHHHHhcCCChHHH
Q 003372 752 CLPEPIDANPASLDG----KLQRLPTSLSESVQALEKDD-ILR--DMIGEKLLIAIKGIRKA-EINYYSLNKDAYKQ 820 (825)
Q Consensus 752 ~~~~~~~~~~~~~~~----~~~~LP~sl~eAl~~l~~d~-~l~--~~lG~~~v~~y~~~k~~-E~~~~~~~~~~~~~ 820 (825)
+|++|+++|+|+++. .+++||+||.|||++|++|+ +++ ++||++|++.|+++|++ ||+.|...+++|+.
T Consensus 391 ~p~~p~~~n~y~~~~~e~~~~~~LP~sL~eAl~~l~~d~~~l~~~~~lG~~~v~~y~~~K~~~E~~~~~~~vt~wE~ 467 (473)
T 3ng0_A 391 DPGEPLDVDIYDLSPEELAKIPSTPGSLEAALEALEKDHEFLTGTGVFSPDFVESWIEYKLDNEVNPMRLRPHPYEF 467 (473)
T ss_dssp CCCCCCCCCC------CTTSSCBCCSSHHHHHHHHHHSCHHHHTTTSSCHHHHHHHHHHHHHHTHHHHHHSCCTHHH
T ss_pred CCCCCCCCchhhCCHhHhcCcccCCCCHHHHHHHHHcChhhhhhhcccCHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 999999999987652 46789999999999999997 665 89999999999999999 99999999999976
No 4
>4acf_A Glutamine synthetase 1; ligase, nucleotide-binding, TRI-substituted IMID TAUT state, RV2220, GLNA1; HET: 46B P3S; 2.00A {Mycobacterium tuberculosis} PDB: 2wgs_A* 2whi_A* 3zxr_A* 3zxv_A* 2bvc_A* 1hto_A* 1htq_A*
Probab=100.00 E-value=1.1e-89 Score=787.07 Aligned_cols=403 Identities=25% Similarity=0.409 Sum_probs=355.8
Q ss_pred hccCCceEEEEEEecCCCCceeEEeechhhhhHHhhcccccccccc-ccccccCCCCCCCCCCCCCcEEEEEecCCcEec
Q 003372 403 AFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (825)
Q Consensus 403 ~~~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~~d~~L~PD~sT~~~~ 481 (825)
+++.+|+||+++|+|++|++|+|.||+++|.+.++++|++|+++++ ++. -...+|++|+||++|++++
T Consensus 21 i~~~~I~~V~l~f~D~~G~~r~k~ip~~~~~~~~~~~G~~fdgssi~G~~-----------~~~~sD~~l~PD~~T~~~~ 89 (486)
T 4acf_A 21 AKDEKVEYVDVRFCDLPGIMQHFTIPASAFDKSVFDDGLAFDGSSIRGFQ-----------SIHESDMLLLPDPETARID 89 (486)
T ss_dssp HHHTTCCEEEEEEECSSSCEEEEEEEGGGCSHHHHHTCEEEEGGGSTTSC-----------CGGGCEEEEEECGGGCEEC
T ss_pred HHHCCCcEEEEEEECCCCcEEEEEEEHHHHHHHHHHCCCeeecccccccc-----------cCCCCCEEEEEccceeEEC
Confidence 4456999999999999999999999999998766789999987764 221 1134799999999999999
Q ss_pred cCCCcc-cceeEEEEcC-CCCcCCCChHHHHHHHHHHHHHh-cCceEEEeeeeEEEEEeecccC----------------
Q 003372 482 PWQKQE-EMIMADMHLK-PGEPWEYCPREALRKVSRLLKEE-FNLVLNAGFEIEFYLLKSVLRE---------------- 542 (825)
Q Consensus 482 p~~~~~-a~v~~~~~~~-~g~p~~~~pR~~L~~~~~~~~~~-~g~~~~~g~E~EF~l~~~~~~~---------------- 542 (825)
||.++. +.|.|++++. +|+|++.|||++|||++++++++ +|+++++|+|+|||||++...+
T Consensus 90 Pw~~~~~~~v~~~~~d~~~g~P~~~~pR~iLk~~~~~~~~~g~~~~~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~g~ 169 (486)
T 4acf_A 90 PFRAAKTLNINFFVHDPFTLEPYSRDPRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGW 169 (486)
T ss_dssp SSCSSCEEEEEEEEECTTTCCBCTTCHHHHHHHHHHHHHHHSSCSEEEEEEEECEEEESEEEEEECSSCEEEEEECTTBG
T ss_pred CcCCCccEEEEEEEeeCCCCCCCCCCchHHHHHHHHHHHHcCCcceecccceeEEEEeccccccccccCCcccCCccccc
Confidence 999875 5688999874 89999999999999999999854 4668999999999999752100
Q ss_pred ----------CC--CCCccCCCCCcCcCCccCCchHHHHHHHHHHHhCCCCeeeeecCCCC-CceEEecCcChHHHHHHH
Q 003372 543 ----------GK--EEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGK-GQFEIALGHTVAAKAADN 609 (825)
Q Consensus 543 ----------~~--~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~p-GQ~Ei~l~~~~~l~aaD~ 609 (825)
+. ..+.+.+..+||+..+.+...+++++|++.|+++||+|+++|+|+|| |||||++.|+++|++||+
T Consensus 170 ~~~~~~~~~~g~p~~~~~~~~~~~y~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~gp~GQ~Ei~~~~~~~l~aAD~ 249 (486)
T 4acf_A 170 WNTGAATEADGSPNRGYKVRHKGGYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNSLLHAADD 249 (486)
T ss_dssp GGTTCSBCTTSCBCCCCCBCTTCCSSBCTTTSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHH
T ss_pred cCCCCcccCCCCCCCCcccccCCccccCCcchhHHHHHHHHHHHHHhCCceEEeeeeeeeccceeEEeccCcchhhhhhH
Confidence 00 01223345678888888899999999999999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCeEEeccc---------------ccCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHhh
Q 003372 610 LIFTREVLRAVARKHGLLATFVPN---------------LWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAF 674 (825)
Q Consensus 610 ~~~~r~~i~~iA~~~Gl~AtF~pK---------------l~~~g~n~f~~~~~~~~~~ls~~~~~fiaGil~h~~al~a~ 674 (825)
++++|++||+||++||+.|||||| +|++|+|+|+ ++++..+||+++++||||||+|++++++|
T Consensus 250 ~~~~k~~vk~vA~~~G~~aTFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~--~~~~~~~lS~~~~~fiaGll~h~~~l~a~ 327 (486)
T 4acf_A 250 MQLYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLWKDGAPLMY--DETGYAGLSDTARHYIGGLLHHAPSLLAF 327 (486)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEESSB--CTTSGGGBCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCeEEEeeccccCCCcccceeeeeeccCCCcccc--ccccccccchHHHHHHHHHHHhhhcceee
Confidence 999999999999999999999999 5677888888 56667789999999999999999999999
Q ss_pred hCCCCCCccCCCCCCcCCcccccccCCCCCcccccCCCCCCCCCcceEEecCCCCCCChHHHHHHHHHHHHHHHhc-cCC
Q 003372 675 TAPVPNSYDRIQPNTWSGAYQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCL 753 (825)
Q Consensus 675 ~~P~~nSY~Rl~~g~~ap~~~~WG~~NR~a~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAgl~Gi~~-l~~ 753 (825)
++||+||||||+||+|||++++||.+||+++||||... .++.++|||+|++|++|||||++||||+|||+||++ ++|
T Consensus 328 ~~PtvNSYkRl~pg~~AP~~~~wg~~NRsa~iRip~~~--~~~~~~riE~R~pd~~aNPYLalAailaAGldGI~~~l~p 405 (486)
T 4acf_A 328 TNPTVNSYKRLVPGYEAPINLVYSQRNRSACVRIPITG--SNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIEP 405 (486)
T ss_dssp HSCSTTHHHHSSTTSSSCSBSCEEETCTTSSEEECCCT--TCTTTCCEEECCCCSSSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ecCCCcchhccCCCCcCCceeEEeccCCCcceEecccC--CCCccceeeecCCCCCCCHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999999999999632 224567999999999999999999999999999999 999
Q ss_pred CCCCCCCcccccC----CCCCCCcCHHHHHHHHhcCcHHHh---hhhHHHHHHHHHHHH-HHHHHHhcCCChHHH
Q 003372 754 PEPIDANPASLDG----KLQRLPTSLSESVQALEKDDILRD---MIGEKLLIAIKGIRK-AEINYYSLNKDAYKQ 820 (825)
Q Consensus 754 ~~~~~~~~~~~~~----~~~~LP~sl~eAl~~l~~d~~l~~---~lG~~~v~~y~~~k~-~E~~~~~~~~~~~~~ 820 (825)
++|+++|+|+++. ++++||.||.|||++|++|..++. +||++||+.|+++|| .||+.|...+++|+.
T Consensus 406 ~~p~~~n~y~~~~~e~~~i~~LP~sL~eAl~~le~d~~~~~~~~v~g~~~v~~y~~~Kr~~E~~~~~~~vt~wE~ 480 (486)
T 4acf_A 406 QAPVDKDLYELPPEEAASIPQTPTQLSDVIDRLEADHEYLTEGGVFTNDLIETWISFKRENEIEPVNIRPHPYEF 480 (486)
T ss_dssp CCCCCSCGGGCCHHHHHTSCBCCSSHHHHHHHHHHCCHHHHGGGSSCHHHHHHHHHHHHHHTHHHHHTSCCHHHH
T ss_pred CCccCCccccCCHHHHcCccccccCHHHHHHHHhcCHHHHHhhCcCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
Confidence 9999999997653 678999999999999999987653 699999999999997 699999999999985
No 5
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=100.00 E-value=2.8e-88 Score=771.30 Aligned_cols=402 Identities=24% Similarity=0.366 Sum_probs=356.9
Q ss_pred hhhhccCCceEEEEEEecCCCCceeEEeechhhhhHHhhcccccccccc-ccccccCCCCCCCCCCCCCcEEEEEecCCc
Q 003372 400 KSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACM-GMTSAVDGPADGTNLSGTGEIRLMPDLSTR 478 (825)
Q Consensus 400 ~~~~~~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~-~~~~~~d~~~~~~~~~~~~d~~L~PD~sT~ 478 (825)
+++. +.+|+||+++|+|+.|++|+|.||+++|.+.+.+.|++|++++. ++. -.+.+|++|+||++|+
T Consensus 7 ~~~~-~~~i~~v~~~~~D~~G~~r~k~vp~~~~~~~~~~~g~~fdgss~~g~~-----------~~~~sD~~l~PD~~T~ 74 (468)
T 1f52_A 7 TMLN-EHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWK-----------GINESDMVLMPDASTA 74 (468)
T ss_dssp HHHH-HTTCCEEEEEEECTTSCEEEEEEEGGGCCHHHHHHCEEEEGGGSTTSC-----------CSSCCEEEEEECGGGC
T ss_pred HHHH-hCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHhhCceeeccccccccc-----------cCCCCCEEEEEecCCc
Confidence 3444 44999999999999999999999999999844568898877553 221 1246899999999999
Q ss_pred EeccCCC-cccceeEEEEcC-CCCcCCCChHHHHHHHHHHHHHhcCc--eEEEeeeeEEEEEeecc----c---------
Q 003372 479 WRIPWQK-QEEMIMADMHLK-PGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVL----R--------- 541 (825)
Q Consensus 479 ~~~p~~~-~~a~v~~~~~~~-~g~p~~~~pR~~L~~~~~~~~~~~g~--~~~~g~E~EF~l~~~~~----~--------- 541 (825)
+++||.+ ++++|+||+++. +|+|++.|||++||+++++++ ++|+ ++.+|+|+|||||++.. .
T Consensus 75 ~~~Pw~~~~~~~v~~d~~~~~~G~p~~~~pR~ilk~~~~~l~-~~G~~~~~~~G~E~EFfl~~~~~~~~~~~~~~~~~~~ 153 (468)
T 1f52_A 75 VIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLR-ATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDD 153 (468)
T ss_dssp EECSSCSSCEEEEEEEEECTTTCCCCTTCHHHHHHHHHHHHH-HHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEEC
T ss_pred EEccccCCCceEEEEEEEeCCCCCcCCCCHHHHHHHHHHHHH-HcCCCcceEEEeeeEEEEEeccccccCCccccccccc
Confidence 9999987 489999999998 799999999999999999998 5799 89999999999997531 0
Q ss_pred -CC-C----------CCCccCCCCCcCcCCccCCchHHHHHHHHHHHhCCCCeeeeecCCCCC-ceEEecCcChHHHHHH
Q 003372 542 -EG-K----------EEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKG-QFEIALGHTVAAKAAD 608 (825)
Q Consensus 542 -~~-~----------~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pG-Q~Ei~l~~~~~l~aaD 608 (825)
++ + .+..|.++++||+..+.+...+++++|++.|+++||+|++.|+|+||| ||||++.|.++++|||
T Consensus 154 ~~~~~~~~~~~~~~~~g~~~~~~~~Y~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~apggQ~Ei~~~~~~~l~aAD 233 (468)
T 1f52_A 154 IEGAWNSSTKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKAD 233 (468)
T ss_dssp TTCGGGGGCCCTTCCCCCCCCTTCCSSBCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHH
T ss_pred cccccCCCccccccCCCCCCCCCCCccCCCccccHHHHHHHHHHHHHHCCCCeEEeecCCCCceeEEEeccCCCHHHHHH
Confidence 00 1 022455677899988888999999999999999999999999999996 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCeEEeccc---------------ccCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHh
Q 003372 609 NLIFTREVLRAVARKHGLLATFVPN---------------LWQNGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILA 673 (825)
Q Consensus 609 ~~~~~r~~i~~iA~~~Gl~AtF~pK---------------l~~~g~n~f~~~~~~~~~~ls~~~~~fiaGil~h~~al~a 673 (825)
+++++|++||+||++||+.|||||| +|++|+|+|. ++ +..+||.++++||||||+|++++++
T Consensus 234 ~~~~~k~~vk~vA~~hGl~atFmpKP~~g~~GSG~H~h~Sl~~~g~Nlf~--~~-~~~~ls~~~~~~iaGll~h~~~l~a 310 (468)
T 1f52_A 234 EIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKNGTNLFS--GD-KYAGLSEQALYYIGGVIKHAKAINA 310 (468)
T ss_dssp HHHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEETTB--CS-SGGGBCHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCEEEEeCCCCCCCCCCCcceeeccccCCCcccC--CC-CcchHHHHHHHHHHHHHHHHHHhHh
Confidence 9999999999999999999999999 5667888886 33 3457999999999999999999999
Q ss_pred hhCCCCCCccCCCCCCcCCcccccccCCCCCcccccCCCCCCCCCcceEEecCCCCCCChHHHHHHHHHHHHHHHhc-cC
Q 003372 674 FTAPVPNSYDRIQPNTWSGAYQCWGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LC 752 (825)
Q Consensus 674 ~~~P~~nSY~Rl~~g~~ap~~~~WG~~NR~a~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAgl~Gi~~-l~ 752 (825)
|++|++||||||+||+|||.+++||.+||+++||||... ++..+|||+|++|++|||||++||||+|||+||++ ++
T Consensus 311 ~~ap~~NSYkRL~pg~eAP~~i~wg~~NRsa~iRiP~~~---~~~~~riE~R~pd~~aNPYLalaailaagL~GI~~~l~ 387 (468)
T 1f52_A 311 LANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVA---SPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIH 387 (468)
T ss_dssp HHSCSGGGGGTSSSCSSCCCEEEEESSCTTEEEECCCCS---CGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HhcCCccchhccCCCCcCcCcceeccCCcccceeeCCCC---CCCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999621 13457999999999999999999999999999999 99
Q ss_pred CCCCCCCCcccccC----CCCCCCcCHHHHHHHHhcC-cHHH--hhhhHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 003372 753 LPEPIDANPASLDG----KLQRLPTSLSESVQALEKD-DILR--DMIGEKLLIAIKGIRKAEINYYSLNKDAYKQ 820 (825)
Q Consensus 753 ~~~~~~~~~~~~~~----~~~~LP~sl~eAl~~l~~d-~~l~--~~lG~~~v~~y~~~k~~E~~~~~~~~~~~~~ 820 (825)
|++|+++|+++++. +.+.||.||.|||++|++| .+++ ++||+++++.|+++|++||+.|...+++|+.
T Consensus 388 p~~~~~~~~~~~~~~e~~~~~~LP~sL~eAl~~l~~~~~~~~~~~~lg~~~~~~~~~~k~~E~~~~~~~vt~wE~ 462 (468)
T 1f52_A 388 PGEPMDKNLYDLPPEEAKEIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEF 462 (468)
T ss_dssp CCSCCCSCCSSSCCSSTTCCCBCCSSHHHHHHHHHHTCHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHSCCHHHH
T ss_pred CCCCcCcChhhcCHHHHhCcCCCCCCHHHHHHHHhcCHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 99999999987653 4678999999999999999 5677 8999999999999999999999999999876
No 6
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=100.00 E-value=3.8e-83 Score=718.47 Aligned_cols=382 Identities=23% Similarity=0.272 Sum_probs=329.2
Q ss_pred hhhhccCCceEEEEEEecCCCCceeEEeechhhhhHHhhccccccccccccccccCCCCCCCCCCC-CCcEEEEEecCCc
Q 003372 400 KSDAFESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTKYGVGLTFACMGMTSAVDGPADGTNLSG-TGEIRLMPDLSTR 478 (825)
Q Consensus 400 ~~~~~~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~~-~~d~~L~PD~sT~ 478 (825)
+++.+ .+|+||+++|+|++|++|+|+||+++|.+ + .+|+++++++ . ..+ ....+ .+|++|+||++|+
T Consensus 7 ~~l~~-~~i~~v~~~~~D~~G~~r~k~ip~~~~~~-~-~~g~~~~gs~-~----~~~----~~~~~~~sD~~l~PD~~T~ 74 (421)
T 2j9i_A 7 TMLNE-HAAAFVRFEATDAAGASRSKSIPAQFFEK-V-IHARGYLEDG-E----VNA----GAAGAAASDIVLMPELSTA 74 (421)
T ss_dssp HHHHH-TTCSEEEEEEECSSSCEEEEEEEGGGCCT-T-HHHHCEEECG-G----GST----TTCCTTCCCEEEEECSSCC
T ss_pred HHHHh-CCCCEEEEEEECCCCCEEEEEEEHHHHHH-h-hcCCeeeccc-C----ccc----ccccCCCCCEEEEEecCce
Confidence 34444 49999999999999999999999999944 3 3567776532 0 111 10123 4799999999999
Q ss_pred EeccC-CCcccceeEEEEcCCCCcCCCChHHHHHHHHHHHHHhcCc--eEEEeeeeEEEEEeecccCCCCCCccCCCCCc
Q 003372 479 WRIPW-QKQEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNL--VLNAGFEIEFYLLKSVLREGKEEWVPIDFTPY 555 (825)
Q Consensus 479 ~~~p~-~~~~a~v~~~~~~~~g~p~~~~pR~~L~~~~~~~~~~~g~--~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~ 555 (825)
+++|| .+++++|+|| ||+|++.|||++||+++++++ ++|+ ++++|+|+|||||++... +....+|
T Consensus 75 ~~~Pw~~~~~a~v~cd----dG~P~~~~pR~iLk~~~~~~~-~~G~~d~~~~g~E~EF~l~~~~~~-------~~~~p~y 142 (421)
T 2j9i_A 75 AVAAAAAAATAAVICD----GGAAAAASPRYIARAALAQLQ-AAGAAAGLLSAFIADFCIFGVPEV-------INSKTIS 142 (421)
T ss_dssp EECTTSSSSEEEEEEE----EESSCSCCHHHHHHHHHHHHH-HTTSCSEECCEECCCCEEESCCEE-------EECSSCE
T ss_pred EEcCcCCCCeEEEEcC----CCCCCCCChHHHHHHHHHHHH-hcCCccCceEEeeeEEEEEecCCC-------CCCCCCc
Confidence 99999 7889999999 799999999999999999998 5899 999999999999986311 0011246
Q ss_pred CcCCccCCchHHHHHHHHHHHhCCCCeeeeecCCCCCceEEecCcCh-HHHHHHHHHHHHHHHHHHHHHCCCeEEecccc
Q 003372 556 CSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTV-AAKAADNLIFTREVLRAVARKHGLLATFVPNL 634 (825)
Q Consensus 556 ~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~-~l~aaD~~~~~r~~i~~iA~~~Gl~AtF~pKl 634 (825)
|+..+.+...+++++|++.|+ +||+|++.|+|+|||||||++.|.+ ++++||+++++|++||+||++||+.||||||+
T Consensus 143 ~~~~~~~~~~~~~~~i~~~l~-~Gi~ve~~h~E~apgQ~Ei~~~~~~~~l~aaD~~~~~k~~vk~vA~~~G~~atFmpKP 221 (421)
T 2j9i_A 143 FPASTTAAAADQPQEAAAGGA-AGAAAGAAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRYNAIASAAAAA 221 (421)
T ss_dssp EEECCCTTCTTGGGSCCTTCC-CSCCCBTTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTTTCEEECCTTS
T ss_pred CCCCcccchhHHHHHHHHHHh-CCCCeEEeecCCCCCcEEEecCCCChHHHHHHHHHHHHHHHHHHHHHhCCEEEEcCCc
Confidence 666666777889999999999 9999999999999999999999999 99999999999999999999999999999994
Q ss_pred ------------cC---CCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHhhhCCCCCCccCCCCCCcCCccc---c
Q 003372 635 ------------WQ---NGENVFMASDSSSKHGMSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQPNTWSGAYQ---C 696 (825)
Q Consensus 635 ------------~~---~g~n~f~~~~~~~~~~ls~~~~~fiaGil~h~~al~a~~~P~~nSY~Rl~~g~~ap~~~---~ 696 (825)
|+ +|+|+|. +++++ +||+.+++||||||+|++++++|++|++|||| ++.|||.++ +
T Consensus 222 ~~~GSG~~h~Sl~~~~~~G~nlf~--~~~~~-~ls~~~~~~iaGil~h~~~l~a~~~p~~NSYk---~~~~ap~~~~~~~ 295 (421)
T 2j9i_A 222 AAAAAGAGSHSIWDVGAAGTNAFA--GASGA-RATLTGAKWLAGLLAAAAAAAAAAAAAAAAAA---AAAAGAAAAAATA 295 (421)
T ss_dssp STTSCCCBCCEEECEEETTEESSC--SSSGG-GCCHHHHHHHHHHHHHHHHHHHHHTCSHHHHH---HTSSSTTCCCEEE
T ss_pred CCCCCceEEEeccccCCCCceeec--CCCCc-cccHHHHHHHHHHHHHHHHHHHHhCCCccccC---CCCCCCcCeeeee
Confidence 43 4677776 33334 79999999999999999999999999999999 467888777 9
Q ss_pred cccCCCCCcccccCCCCCCCCCcceEEecCCCCCCChHHHHHHHHHHHHHHHhc-cCCCCCCCCCcccccCCCCCCCcCH
Q 003372 697 WGKENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR-LCLPEPIDANPASLDGKLQRLPTSL 775 (825)
Q Consensus 697 WG~~NR~a~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAgl~Gi~~-l~~~~~~~~~~~~~~~~~~~LP~sl 775 (825)
||.+||+++||||.. .++..+|||+|++|++|||||++||||+||++||++ ++||+|+++|++++ ..+.||+||
T Consensus 296 wG~~NRsa~iRip~~---~~~~~~riE~R~pd~~aNPYLa~aailaagl~GI~~~l~~p~~~~~~~~~~--~~~~LP~sL 370 (421)
T 2j9i_A 296 WGAAAAACALNIAAA---AAAKGAQIENKAGAAAANPYLVLAATVAAGLDGIQSAGAAAGAAAADAAAA--APSEIPGKM 370 (421)
T ss_dssp EESSCTTEEEEEECC---SSGGGCEEEECSCBTTSCHHHHHHHHHHHHHHHHHHTCCCCSCBCSSSSCS--SCCCCCSSH
T ss_pred eecCCCccceeeccc---CCCCCCEEEEcCCCCCCChHHHHHHHHHHHhhhhhhccCCCCCCCcchhhc--CcccCCCCH
Confidence 999999999999972 123467999999999999999999999999999999 99888999999853 467899999
Q ss_pred HHHHHHHhcC-cHHHhhhhHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 003372 776 SESVQALEKD-DILRDMIGEKLLIAIKGIRKAEINYYSLNKDAYKQ 820 (825)
Q Consensus 776 ~eAl~~l~~d-~~l~~~lG~~~v~~y~~~k~~E~~~~~~~~~~~~~ 820 (825)
.|||++|++| ++++++||++|+++|+++||+||+. .+++|+.
T Consensus 371 ~eAl~~l~~d~~~l~~~lG~~~~~~y~~~K~~E~~~---~vt~wE~ 413 (421)
T 2j9i_A 371 EDALAALEQDAECLKAGLGEAFIRAAVAAAKYELEN---EETDAEG 413 (421)
T ss_dssp HHHHHHHTTCCSSSSCSCCCHHHHHHHHHHHHHHHH---HHHHHHH
T ss_pred HHHHHHHHhCHHHHHHHcCHHHHHHHHHHHHHHHHh---cCCHHHH
Confidence 9999999999 9999999999999999999999998 4666644
No 7
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-69 Score=599.10 Aligned_cols=325 Identities=16% Similarity=0.199 Sum_probs=262.3
Q ss_pred ccCCceEEEEEEecCCCCceeEEeechhhhhHHhh-ccccccccccccccccCCCCCCCCCCCCCcEEEEEecCCcEecc
Q 003372 404 FESDVSLIRVIWVDASGQHRCRVVPVKRFNDIVTK-YGVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRIP 482 (825)
Q Consensus 404 ~~~~i~~v~l~~~D~~G~~R~k~vp~~~~~~~~~~-~g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~L~PD~sT~~~~p 482 (825)
...+|++|+++|+|.+|++|+|++|+++|.+.+.+ .+++|++++.++. -.+.+|++|+|| |++++|
T Consensus 19 ~~~~i~~v~~~~~D~~G~lR~K~~~~~~~~~~~~~~~~~~fDGss~g~~-----------~~~~sD~~l~Pd--t~~~~P 85 (370)
T 3fky_A 19 DQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFDGSSTNQA-----------PGHDSDIYLKPV--AYYPDP 85 (370)
T ss_dssp --CCCEEEEEEEECSSSCEEEEEEEESSCCCSGGGSCCEEECGGGTTSS-----------CCCC--EEEEEE--EEEECT
T ss_pred ccCCeEEEEEEEEcCCCCeEEEEEECccccchHHhCCccccCCcccccc-----------cCCCCCeeEeee--EEEEcC
Confidence 34689999999999999999999999988765421 2566666554321 135689999999 899999
Q ss_pred CCCc-ccceeEEEEcCCCCcCCCChHHHHHHHHHHHHHhcCceEEEeeeeEEEEEeeccc-CCCC-CCccCCCCCcCcCC
Q 003372 483 WQKQ-EEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLR-EGKE-EWVPIDFTPYCSTA 559 (825)
Q Consensus 483 ~~~~-~a~v~~~~~~~~g~p~~~~pR~~L~~~~~~~~~~~g~~~~~g~E~EF~l~~~~~~-~~~~-~~~p~~~~~~~~~~ 559 (825)
|.++ +++|+||++++||+|++.|||++|||++++++ |+++++|+|+|||||+.... .+++ ...|.++++||+..
T Consensus 86 w~~~~~a~vlcd~~~~dG~P~~~~pR~iLkr~~~~~~---g~~~~~G~E~EF~Lf~~~~~~~~~p~~~~p~~~g~yy~~~ 162 (370)
T 3fky_A 86 FRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHK---DEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGV 162 (370)
T ss_dssp TTCTTCEEEEEEEECTTSSBCTTCCHHHHHHHHHHTG---GGCCEEEEEEEEEEECTTSSBTTCCTTSBCSCSSSCTTCC
T ss_pred CCCCCeEEEEEEEEcCCCCCCCCCHHHHHHHHHHHhc---CCCceEEeeeEEEEEccCCCcccCCCCCccCCCCcccccc
Confidence 9986 89999999999999999999999999999864 89999999999999986321 1211 12466778887665
Q ss_pred ccCC--chHHHHHHHHHHHhCCCCeeeeecCCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHCCCeEEecccccC-
Q 003372 560 AYDA--VSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPNLWQ- 636 (825)
Q Consensus 560 ~~~~--~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~i~~iA~~~Gl~AtF~pKl~~- 636 (825)
+... ..+++++++++|+++||+||++|+|+|||||||++.|+++|++||+++++|++||+||++||+.||||||+..
T Consensus 163 ~~~~~~~~~i~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~~~~~~~l~aAD~~~~~K~~vk~vA~~~G~~ATFmpKP~~g 242 (370)
T 3fky_A 163 GAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKG 242 (370)
T ss_dssp STTTCSCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHTTTCEEECCSCSSSS
T ss_pred chhhHHHHHHHHHHHHHHHHcCCCeeeeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCcEEEEcccccCC
Confidence 5433 5899999999999999999999999999999999999999999999999999999999999999999999653
Q ss_pred ----CCCcccccCCC-CCCCCCcHHHHHHHHHHH-HHHHHHHhhhCCCCCCccCCCCCCcCCcc--cccccCCCCCcccc
Q 003372 637 ----NGENVFMASDS-SSKHGMSSVGEKFMAGVL-HHLSSILAFTAPVPNSYDRIQPNTWSGAY--QCWGKENREAPLRT 708 (825)
Q Consensus 637 ----~g~n~f~~~~~-~~~~~ls~~~~~fiaGil-~h~~al~a~~~P~~nSY~Rl~~g~~ap~~--~~WG~~NR~a~iRv 708 (825)
+|.|+|.|.-. .++.+++. .++|++||+ +|+++|++|+ +||||||+|++|||.+ ++||.+||+++|||
T Consensus 243 d~~GSG~H~H~Sl~~~~~~~g~~~-~~~~i~gl~~~h~~~i~a~~---~nSYkRL~~~~eap~~~~~sWG~~NRsa~iRI 318 (370)
T 3fky_A 243 DWNGAGCHANVSTKEMRQPGGTKY-IEQAIEKLSKRHAEHIKLYG---SDNDMRLTGRHETASMTAFSSGVANRGSSIRI 318 (370)
T ss_dssp SSCCCBEEEEEECHHHHSSSTHHH-HHHHHHHHHHTHHHHHHSSC---TTGGGC--------CCSCCCEEESCTTSSEEE
T ss_pred CCCcccceeeeccccccCCCCHHH-HHHHHHHHHHHhHHHHHHHc---cchhhhcCCCccCCCcccceEecCCCceeEEe
Confidence 35578876521 11234444 489999999 9999999996 7999999999999974 89999999999999
Q ss_pred cCCCCCCCCCcceEEecCCCCCCChHHHHHHHHHHHHHHHhc
Q 003372 709 ACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDGLRR 750 (825)
Q Consensus 709 ~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAgl~Gi~~ 750 (825)
|... .....+|||+|++|++|||||++|+||+||++||++
T Consensus 319 p~~~--~~~~~~riE~R~pda~aNPYLa~Aailaagl~Gi~~ 358 (370)
T 3fky_A 319 PRSV--AKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDN 358 (370)
T ss_dssp CHHH--HHHTCCCEEECCCBTTCCHHHHHHHHHHHHHCCBTT
T ss_pred cCCC--CCCCCCEEEECCCCCCCCHHHHHHHHHHHHhcCccc
Confidence 9621 111235999999999999999999999999999986
No 8
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural GENO structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A
Probab=100.00 E-value=6.7e-69 Score=595.57 Aligned_cols=330 Identities=17% Similarity=0.214 Sum_probs=269.2
Q ss_pred hhhhhhccC-CceEEEEEEecCCC-CceeEEeechhhhhHHhhc--cccccccccccccccCCCCCCCCCCCCCcEEEEE
Q 003372 398 LKKSDAFES-DVSLIRVIWVDASG-QHRCRVVPVKRFNDIVTKY--GVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMP 473 (825)
Q Consensus 398 ~~~~~~~~~-~i~~v~l~~~D~~G-~~R~k~vp~~~~~~~~~~~--g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~L~P 473 (825)
+..||..++ ++.+|+++|+|++| ++|+|.+|+++|.+.+ +. |++++.++..+. ..+.+|++|+|
T Consensus 33 l~~~l~~~~~~~~~v~~~~~D~~G~~~R~K~ip~~~~~~~~-~~~p~~~~dgss~~~~-----------~~~~sD~~l~P 100 (384)
T 2ojw_A 33 KQVYMSLPQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCV-EELPEWNFDGSSTLQS-----------EGSNSDMYLVP 100 (384)
T ss_dssp HHHHHTSCCCSCEEEEEEEECTTSSCEEEEEEEESSCCSSG-GGSCCEEEEGGGTTSS-----------BTTBCEEEEEE
T ss_pred HHHHHhCCCCCcEEEEEEEECCCCCeeeEEEEEHHHhhhhH-hhCccccccCcccccc-----------cCCCCcEEEEe
Confidence 666887775 59999999999999 9999999999998754 44 666665544311 13568999999
Q ss_pred ecCCcEeccCCC-cccceeEEEEcCCCCcCCCChHHHHHHHHHHHHHhcCceEEEeeeeEEEEEeecccC-CCC-CCccC
Q 003372 474 DLSTRWRIPWQK-QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLRE-GKE-EWVPI 550 (825)
Q Consensus 474 D~sT~~~~p~~~-~~a~v~~~~~~~~g~p~~~~pR~~L~~~~~~~~~~~g~~~~~g~E~EF~l~~~~~~~-~~~-~~~p~ 550 (825)
| |++++||.+ ++++|+||++++||+|++.|||.+|||++++++ |+++++|+|+|||||++.... +++ ...|.
T Consensus 101 D--t~~~~Pw~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~---g~~~~~G~E~EF~Lf~~~~~~~~~~~~g~p~ 175 (384)
T 2ojw_A 101 A--AMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVS---NQHPWFGMEQEYTLMGTDGHPFGWPSNGFPG 175 (384)
T ss_dssp E--EEEECTTTCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHHTG---GGCCEEEEEEEEEEEC-CCSBTTCCTTSCCS
T ss_pred e--EEEECCCCCCCeEEEEEEEECCCCCCCCcCHHHHHHHHHHHHh---CCEEEEEeeeEEEEEccCCCcccccCCCccC
Confidence 9 899999987 589999999999999999999999999999985 799999999999999863211 211 11355
Q ss_pred CCCCcCcCCccC--CchHHHHHHHHHHHhCCCCeeeeecCCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHCCCeE
Q 003372 551 DFTPYCSTAAYD--AVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLA 628 (825)
Q Consensus 551 ~~~~~~~~~~~~--~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~i~~iA~~~Gl~A 628 (825)
++++||+..+.+ ...+++++|+++|+++||+||++|+|+|||||||++.|+++|++||+++++|++||+||++||+.|
T Consensus 176 ~~g~y~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~Gl~a 255 (384)
T 2ojw_A 176 PQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIA 255 (384)
T ss_dssp CSSSCTTCCSTTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCCCCCcccccchHHHHHHHHHHHHHHHHCCCCeEeeecCCCCcceEEEcCCCcHHHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 677888776655 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Eeccccc-C----CCCcccccCCC-CCCCCCcHHHHHHHHHH-HHHHHHHHhh-hCCCCCCccCCCCCCcCCc--ccccc
Q 003372 629 TFVPNLW-Q----NGENVFMASDS-SSKHGMSSVGEKFMAGV-LHHLSSILAF-TAPVPNSYDRIQPNTWSGA--YQCWG 698 (825)
Q Consensus 629 tF~pKl~-~----~g~n~f~~~~~-~~~~~ls~~~~~fiaGi-l~h~~al~a~-~~P~~nSY~Rl~~g~~ap~--~~~WG 698 (825)
|||||+. . +|.|+|+|... .+..+ ....+++++|+ ++|+++++++ .+|++||||||+||+|||. +++||
T Consensus 256 TFmpKP~~~d~~GSG~H~H~Sl~~~~~~~g-~n~f~~~~~gl~~~h~~~i~a~~p~~~~nsykRL~pg~ea~~~~~~sWG 334 (384)
T 2ojw_A 256 TFDPKPIPGNWNGAGCHTNFSTKAMREENG-LKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAG 334 (384)
T ss_dssp ECCSCSSCSSSCCCBEEEEEECHHHHSTTT-HHHHHHHHHHHHTCHHHHHHHSSTTTTTTGGGTCC-----CCTTCCCEE
T ss_pred EEeccccCCCCCCCeeeEEeehhhhcCCCc-hhHHHHHHHHHHHHHHHHheEeccCCCCCchhhccCCcccCCCceEEee
Confidence 9999975 2 35678876521 11123 34557899999 8999999999 3345999999999999986 89999
Q ss_pred cCCCCCcccccCCCCCCCCCcceEEecCCCCCCChHHHHHHHHHHHHHH
Q 003372 699 KENREAPLRTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDG 747 (825)
Q Consensus 699 ~~NR~a~iRv~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAgl~G 747 (825)
.+||+++||||... .+...+|||+|++|++|||||++||||+||+.+
T Consensus 335 ~~NRsa~iRIp~~~--~~~~~~riE~R~pd~~aNPYLa~Aailaagl~~ 381 (384)
T 2ojw_A 335 VANRSASIRIPRTV--GQEKKGYFEDRRPSANCDPFSVTEALIRTCLLN 381 (384)
T ss_dssp ETCTTSSEEECHHH--HHHTCSCEEECCCBTTCCHHHHHHHHHHHHTSC
T ss_pred cccCCceEEeecCC--CCCCCCEEEEcCCCCCCCHHHHHHHHHHHhcCC
Confidence 99999999999521 111246999999999999999999999999854
No 9
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=100.00 E-value=2.1e-66 Score=570.68 Aligned_cols=322 Identities=19% Similarity=0.231 Sum_probs=266.1
Q ss_pred cCCceEEEEEEecCCC-CceeEEeechhhhhHHhhc--cccccccccccccccCCCCCCCCCCCCCcEEEEEecCCcEec
Q 003372 405 ESDVSLIRVIWVDASG-QHRCRVVPVKRFNDIVTKY--GVGLTFACMGMTSAVDGPADGTNLSGTGEIRLMPDLSTRWRI 481 (825)
Q Consensus 405 ~~~i~~v~l~~~D~~G-~~R~k~vp~~~~~~~~~~~--g~~~~~~~~~~~~~~d~~~~~~~~~~~~d~~L~PD~sT~~~~ 481 (825)
..++.+|+++|+|+.| .+|||++|++.+.+.+ +. |++|+++++++. ....+|++|+|| |++++
T Consensus 15 ~~~~~~v~~~~vD~~g~~~r~k~~~~~~~~~~~-~~~~g~~fdgss~~~~-----------~~~~sD~~l~PD--t~~~~ 80 (356)
T 2d3a_A 15 TTEKIIAEYIWIGGSGMDLRSKARTLPGPVTDP-SKLPKWNYDGSSTGQA-----------PGEDSEVILYPQ--AIFKD 80 (356)
T ss_dssp TCSCEEEEEEEECTTSSCEEEEEEEESSCCCCG-GGSCCEEEEGGGTTSS-----------CSSSCEEEEEEE--EEEEC
T ss_pred CCCeEEEEEEEEcCCCCcccceEEECCcchhhH-hhcCcceecccccccc-----------cCcCCcEEEEEE--EEEEC
Confidence 4578899999999999 9999999999887754 44 778877665421 124689999999 89999
Q ss_pred cCCC-cccceeEEEEcCCCCcCCCChHHHHHHHHHHHHHhcCceEEEeeeeEEEEEeecccC--CCC-CCccCCCCCcCc
Q 003372 482 PWQK-QEEMIMADMHLKPGEPWEYCPREALRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLRE--GKE-EWVPIDFTPYCS 557 (825)
Q Consensus 482 p~~~-~~a~v~~~~~~~~g~p~~~~pR~~L~~~~~~~~~~~g~~~~~g~E~EF~l~~~~~~~--~~~-~~~p~~~~~~~~ 557 (825)
||.+ ++++|+||++++||+|++.|||++|||+++++++ .|+++++|+|+|||||++.... +++ ...|.++++||+
T Consensus 81 P~~~~~~a~v~cd~~~~dG~P~~~~pR~iLkr~~~~~~~-~g~~~~~G~E~EF~lf~~~~~~~~~~~~~g~p~~~g~y~~ 159 (356)
T 2d3a_A 81 PFRRGNNILVMCDCYTPAGEPIPTNKRYSAAKIFSSPEV-AAEEPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYC 159 (356)
T ss_dssp TTTCTTCEEEEEEEECTTSCBCTTCCHHHHHHHHHSHHH-HHHCCEEEEEEEEEEEETTTCCBTTSCTTSBCSCSSSCTT
T ss_pred CcCCCCceEEEEEEECCCCCCCCCCHHHHHHHHHHHHHh-cCCeeEEecceEEEEEecCCCcccccccCCCCCCCCCcCc
Confidence 9987 5899999999999999999999999999999984 6999999999999999863211 111 113446778888
Q ss_pred CCccCC--chHHHHHHHHHHHhCCCCeeeeecCCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHCCCeEEeccccc
Q 003372 558 TAAYDA--VSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPNLW 635 (825)
Q Consensus 558 ~~~~~~--~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~i~~iA~~~Gl~AtF~pKl~ 635 (825)
..+.+. ..+++++++++|+++||+||++|+|+|||||||++.|++++++||+++++|++||+||++||+.||||||+.
T Consensus 160 ~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pgQ~Ei~~~~~~~l~aAD~~~~~k~~vk~vA~~~G~~aTFmpKP~ 239 (356)
T 2d3a_A 160 GIGAEKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPI 239 (356)
T ss_dssp CCSTTTCCCHHHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHHHTEEEECCSCSS
T ss_pred CcccchHHHHHHHHHHHHHHHHCCCCEEEeecCcCCCceEEecCCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEECCCcc
Confidence 776664 689999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred C-----CCCcccccCCC-CCCCCCcHHHHHHHH-HHHHHHHHHHhhhCCCCCCccCCCCCCcCCc--ccccccCCCCCcc
Q 003372 636 Q-----NGENVFMASDS-SSKHGMSSVGEKFMA-GVLHHLSSILAFTAPVPNSYDRIQPNTWSGA--YQCWGKENREAPL 706 (825)
Q Consensus 636 ~-----~g~n~f~~~~~-~~~~~ls~~~~~fia-Gil~h~~al~a~~~P~~nSY~Rl~~g~~ap~--~~~WG~~NR~a~i 706 (825)
. +|.|+|.|... ....+. .....+++ .+++|++++++|+ +||||||+||+|||. +++||.+||+++|
T Consensus 240 ~~d~~GSG~H~H~Sl~~~~~~~g~-~~f~~~~~~l~l~h~~~l~a~~---~nSYkRL~pg~eap~~~~~swG~~NRsa~i 315 (356)
T 2d3a_A 240 PGDWNGAGAHTNYSTESMRKEGGY-EVIKAAIEKLKLRHKEHIAAYG---EGNERRLTGRHETADINTFSWGVANRGASV 315 (356)
T ss_dssp CSSSCCCBEEEEEECTTTSSTTHH-HHHHHHHHHHHHTHHHHHTTSC---TTHHHHCSSSSSCCCTTCCCEESSCTTSSE
T ss_pred CCCCCCCcceEEechhhhccCCCH-HHHHHHHHHHHHHHHHHHHhHc---cChHHHccCCccCCCcceeEEeccCCeeeE
Confidence 2 35688887522 111121 22233444 3689999999993 599999999999997 8999999999999
Q ss_pred cccCCCCCCCCCcceEEecCCCCCCChHHHHHHHHHHHHHH
Q 003372 707 RTACPPGVKDGVVSNFELKSFDGCANPHLGLAAIIASGIDG 747 (825)
Q Consensus 707 Rv~~~~~~~~~~~~~~E~R~~d~~aNPYL~lAailaAgl~G 747 (825)
|||.. ..+...+|||+|++|++|||||++||||+||+.+
T Consensus 316 RIp~~--~~~~~~~riE~R~pd~~aNPYLa~Aailaagl~~ 354 (356)
T 2d3a_A 316 RVGRE--TEQNGKGYFEDRRPASNMDPYVVTSMIAETTIVW 354 (356)
T ss_dssp ECCHH--HHHTTCCCEEECCCBTTCCHHHHHHHHHHHHTTC
T ss_pred EEccC--CCCCCCCEEEEcCCCCCCCHHHHHHHHHHHhcCC
Confidence 99952 1112246999999999999999999999999843
No 10
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=100.00 E-value=5.5e-57 Score=503.96 Aligned_cols=362 Identities=29% Similarity=0.433 Sum_probs=306.2
Q ss_pred hhHHHHHhccCCcccccCCCcccCCCC---cchhhccccccCCCc-cCCCcchhhhhHHHHHHhhhCCCC--CHHHHHHH
Q 003372 3 FEELREVVENIELVDGHAHNIVSLDSS---FPFIQSFSEATGPAL-SYAPYSLSFKRNLKNIAELYGCDS--SLQAVEEY 76 (825)
Q Consensus 3 ~~~l~~~i~~~p~iD~H~H~~~~~~~~---~~~~~~~~ea~~~~~-~~~~~~~~~~~~~~~l~~~fg~~~--~~~~i~~~ 76 (825)
+++|+++|+++|||||||||++..+.. +||+.++|||+|+++ .+.+.+++ +++++. |||++ |+++||++
T Consensus 2 ~~~l~~~~~~~~~id~h~h~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~----~~~~~~-fg~~~~~~a~~i~~~ 76 (376)
T 2qpx_A 2 MDDLSEFVDQVPLLDHHCHFLIDGKVPNRDDRLAQVSTEADKDYPLADTKNRLA----YHGFLA-LAKEFALDANNPLAA 76 (376)
T ss_dssp CCCCHHHHHHCCEEEEEECCBBCTTCSCHHHHHHHHTSSCCTTSCHHHHTTSHH----HHHHHH-HHHHHCSSTTSTTCC
T ss_pred hHHHHHHHhcCCccccCCccccCcccccccCchHhhhccCCCccccccChhhHH----HHHHHh-CCCCCCCCHHHHHHH
Confidence 357899999999999999999988754 489999999999986 45666665 566667 99998 78889999
Q ss_pred HHHcCcccHHHHHHhhCCcEEEEEecCCC-CCCCCChHHHHhhccC-CCeEEeccchHHHHHHhhCCCCCcccHHHHHHH
Q 003372 77 RRAAGLQSICSICFEAANISAVLIDDGLK-LDKKHGLDWHKSLVPF-VGRILRIERLAEEILDQASPDGSIWTLDVFIET 154 (825)
Q Consensus 77 ~~~l~~~~~~r~ll~~~~v~~~~~d~g~~-~d~~~~~~~h~~~~~~-~~~i~rie~~~~~~~~~~~~~~~~~~~~~~~~a 154 (825)
|+++++++++|+||++|||++||+|||+. +||+++++||+++++. +.+|+|||.+++..... +.+|++|+++
T Consensus 77 ~~~~~~~~~~r~~l~~~~v~~~~~dt~~~~ddp~~~l~~h~~~~~~~~~~~~~ie~~~~~~~~~------~~~~~~~~~~ 150 (376)
T 2qpx_A 77 MNDPGYATYNHRIFGHFHFKELLIDTGFVPDDPILDLDQTAELVGIPVKAIYRLETHAEDFMLE------HDNFAAWWQA 150 (376)
T ss_dssp CCHHHHHHHHHHHHHHTTEEEEEEETTCCCSSBCCCHHHHHHHHTSCEEEEEEHHHHHHHHHTT------CSSHHHHHHH
T ss_pred HHhcCHhHHHHHHHHHCCceEEEecCCCCCCCCCCCHHHHHHhcCcchhheeccchHHHHHhcc------cccHHHHHHH
Confidence 98888889999999999999999999864 5679999999999863 67999999987755433 3479999999
Q ss_pred HHHHHHhhc-ccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEe
Q 003372 155 FLKQLRSAA-NKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIH 233 (825)
Q Consensus 155 l~~~l~~~~-~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~~~e~glpvq~H 233 (825)
|+++|+++. .+++|||||.||||||++.+ .++++++++|+|++.++ +..++++.+..+++|+++++|+++|+|||+|
T Consensus 151 ~~~~l~~~~~~g~~gfksv~~~~~gl~~~~-~~~~~a~~~~~~~~~~~-~~~~~d~~~~p~~l~~~~e~a~e~glpv~iH 228 (376)
T 2qpx_A 151 FSNDVKQAKAHGFVGFKSIAAYRVGLHLEP-VNVIEAAAGFDTWKHSG-EKRLTSKPLIDYMLYHVAPFIIAQDMPLQFH 228 (376)
T ss_dssp HHHHHHTTTTTTCCCEEECHHHHTCSCCCC-CCHHHHHHHHHHHHHHC-CCSCCCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHCCCceeccceEecCCCCCCC-CCHHHHHHHHHHHHcCC-CCCccchhHhHHHHHHHHHHHHHCCCeEEEE
Confidence 999999985 59999999999999999655 47999999999999753 4577888888888999999999999999999
Q ss_pred eCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeeccccccCcccHHHHHHHHHHHHH
Q 003372 234 TGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLE 313 (825)
Q Consensus 234 ~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le 313 (825)
+|.++.+.+...+.|..+.+++++.+||+++||+.| |+|+.+++..++..|||||+|+|| +++..+.++...++++++
T Consensus 229 ~g~~d~~~~~~~~~p~~l~~ll~~~~~P~lkiVl~H-g~~~~~~~~~l~~~~~nvy~d~s~-~~~~~~~~~~~~l~~l~~ 306 (376)
T 2qpx_A 229 VGYGDADTDMYLGNPLLMRDYLKAFTKKGLKVVLLH-CYPYHREAGYLASVFPNLYFDISL-LDNLGPSGASRVFNEAVE 306 (376)
T ss_dssp ESCCCTTSCGGGCCGGGGHHHHHHHGGGTCCEEEEE-CTTCHHHHHHHHHHSTTEEEECTT-HHHHSGGGHHHHHHHHTS
T ss_pred eCCCCCCCCccccCHHHHHHHHhcCCCCCCcEEEEC-CCccHHHHHHHHHhCCCEEEeccc-ccccChhhHHHHHHHHHH
Confidence 998766666777889999999985579999999999 899999999999999999999998 333334578889999999
Q ss_pred HCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhcCCCCChHH-HHHHHHHHHHHhHHHHhcCCCC
Q 003372 314 LAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGE-AIEVAKDIFALNAAQFYKINLG 383 (825)
Q Consensus 314 ~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~-a~~~~~~Il~~NA~rly~L~~~ 383 (825)
..|.+|||||||++.+|+.+|++++++++.+++++++ ..++..+ ..+.+++|+++||+|||+++.+
T Consensus 307 ~~g~dRiLfGSD~P~~~e~~~~~~~~~~~~l~~l~~~----~~ls~~~~~~~~~~~I~~~NA~rlf~l~~~ 373 (376)
T 2qpx_A 307 LAPYTRILFASDASTYPEMYGLAARQFKQALVAHFNQ----LPFVDLAQKKAWINAICWQTSAKLYHQERE 373 (376)
T ss_dssp SSCGGGEECCCCCCBSHHHHHHHHHHHHHHHHHHHHT----CSSCCHHHHHHHHHHHHTHHHHHHTTCGGG
T ss_pred hcCCCCEEEECCCCccchhhcccHHHHHHHHHHHHcc----cCcchhhcCHHHHHHHHHHhHHHHhCCCCC
Confidence 9999999999998777766677777889998887653 1344322 3456999999999999998643
No 11
>1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} SCOP: c.1.9.8
Probab=100.00 E-value=4.9e-54 Score=479.98 Aligned_cols=360 Identities=15% Similarity=0.136 Sum_probs=297.7
Q ss_pred hHHHHHhccCCcccccCCCcccCC-CCcchhhcc-------------------------ccccC--------CCccCCCc
Q 003372 4 EELREVVENIELVDGHAHNIVSLD-SSFPFIQSF-------------------------SEATG--------PALSYAPY 49 (825)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~~-~~~~~~~~~-------------------------~ea~~--------~~~~~~~~ 49 (825)
.+|++.++++||||+|||...... .+.+|+.++ .+++. ..+....+
T Consensus 27 ~~Ly~~~~~~PIiD~HcHl~p~~i~~~~~F~ni~e~wl~gDHYkwr~mRa~Gv~e~~itg~~~~~ekf~~~a~~~~~~~G 106 (463)
T 1j5s_A 27 VRLFNEVKDLPIVDPHNHLDAKDIVENKPWNDIWEVEGATDHYVWELMRRCGVSEEYITGSRSNKEKWLALAKVFPRFVG 106 (463)
T ss_dssp HHHHHHHTTSCEEESCCCCCHHHHHHTCCCSCHHHHHTTTCHHHHHHHHHTTCCGGGTTSSSCHHHHHHHHHHHGGGGTT
T ss_pred HHHHHHhccCCeecCccCCCHHHhccccCcccHHHHhccCchHHHHHHhhcCCChhhhcCCCCHHHHHHHHHhhhHHhcC
Confidence 368888899999999999887442 234566655 22211 00224567
Q ss_pred chhhhhHHHHHHhhhCCCC-----CHHHHHHHHHHcCcccHHHHHHhhCCcEEEEEecCCCCCCCCChHHHHhhcc----
Q 003372 50 SLSFKRNLKNIAELYGCDS-----SLQAVEEYRRAAGLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLVP---- 120 (825)
Q Consensus 50 ~~~~~~~~~~l~~~fg~~~-----~~~~i~~~~~~l~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h~~~~~---- 120 (825)
+..|.|..++|+++|||++ ||++||++|+++.+++++|+||++|||++||| ||||+|+|+||++++.
T Consensus 107 nply~W~hlel~~~FGi~~~l~~~ta~~i~~~~~e~l~~~~~r~ll~~snV~~v~t----TddP~D~Le~h~~l~~~~~~ 182 (463)
T 1j5s_A 107 NPTYEWIHLDLWRRFNIKKVISEETAEEIWEETKKKLPEMTPQKLLRDMKVEILCT----TDDPVSTLEHHRKAKEAVEG 182 (463)
T ss_dssp SHHHHHHHHHHHHHSCCCCCCSHHHHHHHHHHHHHHSTTCCHHHHHHHTTEEEEEC----CBCTTCCCHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhchhhhHHHHHHHcCCEEEEe----CCCCCCchHHHHHHhcCCCC
Confidence 8889999999999999997 89999999986667789999999999999999 8899999999999531
Q ss_pred -------CCCeEEeccchHH-HHHHhhCC-CC-CcccHHHHHHHHHHHHHhhcccccceeeeee--cccCC--CCCCCCC
Q 003372 121 -------FVGRILRIERLAE-EILDQASP-DG-SIWTLDVFIETFLKQLRSAANKIVGLKSIAA--YRSGL--EINPHVT 186 (825)
Q Consensus 121 -------~~~~i~rie~~~~-~~~~~~~~-~~-~~~~~~~~~~al~~~l~~~~~~~vgfks~~a--y~~Gl--~~~~~~~ 186 (825)
|||++++||...+ ++++++++ ++ +|.+|++|++||++|+++ |+++|| +|||| +..+.++
T Consensus 183 ~~v~P~~RPD~~~~ie~~~f~~~v~~L~~~sg~~i~s~~~~~~Al~~r~~~-------F~~~G~~asdhgl~~~~~~~~s 255 (463)
T 1j5s_A 183 VTILPTWRPDRAMNVDKEGWREYVEKMGERYGEDTSTLDGFLNALWKSHEH-------FKEHGCVASDHALLEPSVYYVD 255 (463)
T ss_dssp CEEECCBCCHHHHCTTSTTHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHH-------HHTTTCCEEEEEESSCCCCCCC
T ss_pred ceeeeccCcchhcccCchhHHHHHHHHHHHhCCCcCCHHHHHHHHHHHHHH-------HHHcCcEEEccCCCcccCCCCC
Confidence 3678999997655 77777766 34 788999999999999998 555555 79998 6555588
Q ss_pred HHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEeeCCC-------------CCCCCCCCCC-h--hc
Q 003372 187 KKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFG-------------DKDLDLRLSN-P--LH 250 (825)
Q Consensus 187 ~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~~~e~glpvq~H~G~g-------------d~~~~~~~~~-P--~~ 250 (825)
+++++++|+|+++++.....+...+..+++..+.+.|.++|||||+|+|++ |.|+|..... + ..
T Consensus 256 ~~e~~~if~k~l~g~~ls~~e~~~~~~~ll~~l~~~~~e~g~~mQlH~G~~Rn~n~~~~~~~G~d~G~D~~~~~~~~~~~ 335 (463)
T 1j5s_A 256 ENRARAVHEKAFSGEKLTQDEINDYKAFMMVQFGKMNQETNWVTQLHIGALRDYRDSLFKTLGPDSGGDISTNFLRIAEG 335 (463)
T ss_dssp HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECEECSCSHHHHHHTCSSSSCCEECSCCCHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEeecCCCCCCHHHHHHhCCCCCCCCccccchHHHH
Confidence 999999999999874334444556788899999999999999999999984 3344443322 2 24
Q ss_pred hHHHHhhcCCCC-cEEEEeCCCCchHHHHHHHHHhCCeeeeccccccCcccHHHHHHHHHHHHHHCCCCcEE-EecCCCC
Q 003372 251 LRAILEDKRFSK-CRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVM-FSTDAYA 328 (825)
Q Consensus 251 L~~l~~~~~~P~-l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kil-fgSD~~~ 328 (825)
|..+++ ++++ .|+|+.|+.-.+.+++++|+++|||||+|.+|||++. ++||.+++++++|++|++|++ |+||+|+
T Consensus 336 L~~lL~--~~~~~~k~iLy~Lnp~~~~~la~lag~Fp~vq~g~~WWf~d~-~~gm~~~l~~l~e~~~lskfvGmlTDsRs 412 (463)
T 1j5s_A 336 LRYFLN--EFDGKLKIVLYVLDPTHLPTISTIARAFPNVYVGAPWWFNDS-PFGMEMHLKYLASVDLLYNLAGMVTDSRK 412 (463)
T ss_dssp HHHHHH--HSTTTSCEEEEESSGGGHHHHHHHHHHCTTEEECCCCSTTCS-HHHHHHHHHHHHTTSCGGGCCCCCCCCSS
T ss_pred HHHHHH--hcccCCCeEEEecCHhhHHHHHHHHccCCccccCCchhhcCC-HHHHHHHHHHHHHhcchhccccccccchH
Confidence 888888 7776 7777777733378999999999999999999999985 899999999999999999999 9999999
Q ss_pred Ccchhh-hhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhc
Q 003372 329 SPETYF-LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (825)
Q Consensus 329 ~P~~~~-~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~ 379 (825)
| ++| +++++|||+||++|++||++|++|.+++.+++++|||+||+++|+
T Consensus 413 f--LsY~~rhe~fRRiLc~~Lg~~Ve~G~~p~~~~~~iv~~I~y~NA~~~f~ 462 (463)
T 1j5s_A 413 L--LSFGSRTEMFRRVLSNVVGEMVEKGQIPIKEARELVKHVSYDGPKALFF 462 (463)
T ss_dssp T--THHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHC
T ss_pred H--hhccHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHhC
Confidence 9 578 999999999999999999999999888999999999999999996
No 12
>3iac_A Glucuronate isomerase; IDP02065, structural genom center for structural genomics of infectious diseases, CSGI; 2.22A {Salmonella typhimurium} SCOP: c.1.9.0
Probab=100.00 E-value=1.8e-52 Score=461.68 Aligned_cols=362 Identities=14% Similarity=0.146 Sum_probs=307.4
Q ss_pred hHHHH-HhccCCcccccCCCccc-----------------CC---------CCcchhhccc-cccCC--------CccCC
Q 003372 4 EELRE-VVENIELVDGHAHNIVS-----------------LD---------SSFPFIQSFS-EATGP--------ALSYA 47 (825)
Q Consensus 4 ~~l~~-~i~~~p~iD~H~H~~~~-----------------~~---------~~~~~~~~~~-ea~~~--------~~~~~ 47 (825)
.+|++ .++++||||-|||---. +| .+.|.+.++. +++.- .+...
T Consensus 20 r~LYh~~a~~lPIiDyH~Hl~P~~iaen~~F~nit~lwl~gDHYkwR~mrs~Gv~e~~itG~~a~~~ekf~~~A~t~p~~ 99 (473)
T 3iac_A 20 RTLYHKYAAPMPIYDFHCHLSPQEIADDRRFDNLGQIWLEGDHYKWRALRSAGVDESLITGKETSDYEKYMAWANTVPKT 99 (473)
T ss_dssp HHHHHHTTTTSCEEECSCCCCHHHHHHTCCCSCHHHHHHSSCSHHHHHHHHTTCCGGGTTCTTSCHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHhcCCEECCCCCCCHHHhccCCCCCCHHHHhccCchHHHHHHHHcCCCHHHccCCCCChHHHHHHHHHHHHHh
Confidence 46884 89999999999996542 11 2346666655 55431 13356
Q ss_pred CcchhhhhHHHHHHhhhCCCC------CHHHHHHHHH-Hc-CcccHHHHHHhhCCcEEEEEecCCCCCCCCChHHHHhhc
Q 003372 48 PYSLSFKRNLKNIAELYGCDS------SLQAVEEYRR-AA-GLQSICSICFEAANISAVLIDDGLKLDKKHGLDWHKSLV 119 (825)
Q Consensus 48 ~~~~~~~~~~~~l~~~fg~~~------~~~~i~~~~~-~l-~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h~~~~ 119 (825)
.++..|.|..+||+++|||++ ||++||++++ +| ++++++|.||+++||++||| ||||+|+|+||++++
T Consensus 100 ~gnPly~W~hleL~r~FGi~~~~L~~~tA~~I~d~~n~~L~~~~f~~r~L~~~~nVe~v~T----TDDP~D~L~~H~~i~ 175 (473)
T 3iac_A 100 LGNPLYHWTHLELRRPFGITGTLFGPDTAESIWTQCNEKLATPAFSARGIMQQMNVRMVGT----TDDPIDSLEYHRQIA 175 (473)
T ss_dssp TTSHHHHHHHHHHHTTTCCCSCCCSHHHHHHHHHHHHHHHTSGGGSHHHHHHHTTEEEEEC----CBCTTCCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCCCCHHHHHHHCCcEEEEe----CCCccccHHHHHHHH
Confidence 788999999999999999986 8999999998 45 56799999999999999999 999999999999986
Q ss_pred c------------CCCeEEeccchHH-HHHHhhCC-C-CCcccHHHHHHHHHHHHHhhcccccceeeeeec--ccCCCCC
Q 003372 120 P------------FVGRILRIERLAE-EILDQASP-D-GSIWTLDVFIETFLKQLRSAANKIVGLKSIAAY--RSGLEIN 182 (825)
Q Consensus 120 ~------------~~~~i~rie~~~~-~~~~~~~~-~-~~~~~~~~~~~al~~~l~~~~~~~vgfks~~ay--~~Gl~~~ 182 (825)
+ |||+++.||...+ +++++|++ + .+|.+|++|++||++|+++ |++.||. |||++..
T Consensus 176 ~~~~f~~~VlPtfRPD~a~~i~~~~f~~yv~~L~~~sg~~i~~~~~ll~AL~~R~~~-------F~~~Gcr~sDHgl~~~ 248 (473)
T 3iac_A 176 ADDSIDIEVAPSWRPDKVFKIELDGFVDYLRKLEAAADVSITRFDDLRQALTRRLDH-------FAACGCRASDHGIETL 248 (473)
T ss_dssp HCTTCCSEEECCBCCHHHHCTTSTTHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHH-------HHHTTCCEEEEEESSC
T ss_pred hcCCCCceEeeccCCccccCCCchhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH-------HHHcCcEehhcCCccc
Confidence 4 3789999998777 88999887 3 4899999999999999999 7777775 9999865
Q ss_pred CC---CCHHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEeeCC------------C-CCCCCCC--
Q 003372 183 PH---VTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGF------------G-DKDLDLR-- 244 (825)
Q Consensus 183 ~~---~~~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~~~e~glpvq~H~G~------------g-d~~~~~~-- 244 (825)
.+ ++.++++++|.|+++++.....+...+..++++.+.+++.|.||+||+|.|. | |+|.|..
T Consensus 249 ~~~~~~s~~e~~~if~k~l~G~~ls~~e~~~f~~~~l~~la~~~~e~gwvmQlH~Ga~Rn~n~~~f~~lG~D~G~D~~~d 328 (473)
T 3iac_A 249 RFAPVPDDAQLDAILGKRLAGETLSELEIAQFTTAVLVWLGRQYAARGWVMQLHIGAIRNNNTRMFRLLGPDTGFDSIGD 328 (473)
T ss_dssp CCCCCCCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECEECCCCHHHHHHHCSSSSCCEECC
T ss_pred ccCCCCCHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHCCCeeeeecccccCCCHHHHHHhCCCCCCCCCCC
Confidence 43 4789999999999987444445566677889999999999999999999998 5 5666543
Q ss_pred --CCChh--chHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCe------eeeccccccCcccHHHHHHHHHHHHHH
Q 003372 245 --LSNPL--HLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQ------VYLDFGLAIPKLSVQGMISSIKELLEL 314 (825)
Q Consensus 245 --~~~P~--~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pN------Vyld~s~~~~~~~~~g~~~~l~~~le~ 314 (825)
++.++ +|+.+-..+++|+++++.+++. +.++++.|+++||+ ||++.+|||+++ ++||+++++.+.++
T Consensus 329 ~~~~~~L~~lLd~~~~~~~LpktILy~Lnp~--~n~~latlag~F~~~~~~gkvq~G~~WWFnD~-~~GM~rq~~~l~~~ 405 (473)
T 3iac_A 329 NNISWALSRLLDSMDVTNELPKTILYCLNPR--DNEVLATMIGNFQGPGIAGKVQFGSGWWFNDQ-KDGMLRQLEQLSQM 405 (473)
T ss_dssp CCCHHHHHHHHHHHHTTTCCCEEEEEESSGG--GHHHHHHHGGGSCCTTSTTSEEECCCCGGGCS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccCCCCeeeEEeCCcc--chHHHHHHHhhcCCCCcCceeEecCcccccCC-HHHHHHHHHHHHHh
Confidence 33333 5666666678999999999997 67889999999999 999999999986 99999999999999
Q ss_pred CCCCcEE-EecCCCCCcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHH--HHHHHHHHHHhHHHHhcCC
Q 003372 315 APTKKVM-FSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEA--IEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 315 ~~~~kil-fgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a--~~~~~~Il~~NA~rly~L~ 381 (825)
++++|++ |.||+|+|. +|++|++|||+||++|++||++|++|.+++ .+++++|+|+||+++|+++
T Consensus 406 g~l~~fvGmltDSRsFl--Sy~RHeyfRRilc~~lg~~Ve~G~~p~D~~~l~~iv~dI~y~nak~yF~~~ 473 (473)
T 3iac_A 406 GLLSQFVGMLTDSRSFL--SYTRHEYFRRILCNLLGQWAQDGEIPDDEAMLSRMVQDICFNNAQRYFTIK 473 (473)
T ss_dssp SCGGGCCCCCCCCSCTT--TTHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHTHHHHHHTSCC
T ss_pred hhhhcccccccchHhhh--hhHHHHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHhHHHHHhCCC
Confidence 9999999 999999998 579999999999999999999999999887 8999999999999999964
No 13
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=100.00 E-value=9.8e-52 Score=465.05 Aligned_cols=364 Identities=15% Similarity=0.162 Sum_probs=296.4
Q ss_pred hHHHHHhccCCcccccCCCcccC---C-----------------------CCcchhh--c-----cccccC--------C
Q 003372 4 EELREVVENIELVDGHAHNIVSL---D-----------------------SSFPFIQ--S-----FSEATG--------P 42 (825)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~---~-----------------------~~~~~~~--~-----~~ea~~--------~ 42 (825)
.+|++.++++||||-|||-.-.. + .+.|.+. | +.+++. .
T Consensus 26 ~~Ly~~a~~~PIiDyH~Hl~p~~iaen~~f~~i~elwl~gdHYkwr~mRa~Gv~e~~~~i~~~~gtg~~~~~ekf~~~a~ 105 (497)
T 2q01_A 26 RGLYALVKDLPIISPHGHTDPSWFATNAPFQDATDLLLAPDHYLFRMLYSQGVSLDALKVRSKAGVPDTDPREAWRVFAS 105 (497)
T ss_dssp HHHHHTTTTSCEEECSCCCCTHHHHHCCCCCCHHHHTTSSCHHHHHHHHTTTCCSTTTTCCBTTBSCSSCHHHHHHHHHH
T ss_pred HHHHHHHhCCCeecCccCCCHHHHhhcCCCCCHHHHhccCcHHHHHHHHHcCCChhhhcccccccCCCCCHHHHHHHHHH
Confidence 36888889999999999965421 1 1122221 2 223321 1
Q ss_pred CccCCCcchhhhhHHHHHHhhhCCCC-----CHHHHHHHHHH-cCcc-cHHHHHHhhCCcEEEEEecCCCCCCCCChHHH
Q 003372 43 ALSYAPYSLSFKRNLKNIAELYGCDS-----SLQAVEEYRRA-AGLQ-SICSICFEAANISAVLIDDGLKLDKKHGLDWH 115 (825)
Q Consensus 43 ~~~~~~~~~~~~~~~~~l~~~fg~~~-----~~~~i~~~~~~-l~~~-~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~~h 115 (825)
.+....+|..|.|..++|+++|||++ ||++||++|++ ++.+ +.+|.||++|||++||| ||||+|+|+||
T Consensus 106 ~~~~~~gnPly~W~hleL~~~FGi~~~l~~~ta~~i~~~~ne~l~~~~~~~R~Ll~~snV~~v~T----TddP~D~Le~h 181 (497)
T 2q01_A 106 HFYLFRGTPSWVWLNHVFSQVFGFTEFLEASNADDYFDRITAALATDAFRPRALFDRFNIETLAT----TEGPHESLQHH 181 (497)
T ss_dssp TGGGGTTSHHHHHHHHHHHHTTCCCBCCCTTTHHHHHHHHHHHHTSGGGSHHHHHHHTTEEEEEC----CBCTTSCCHHH
T ss_pred HhHHhcCCHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhcCccchHHHHHHHcCCEEEEe----CCCCCcchhhH
Confidence 12356788999999999999999986 99999999986 5544 67999999999999999 88999999999
Q ss_pred Hhhcc-----------CCCeEEeccchHH-HHHHhhCC-CC-CcccHHHHHHHHHHHHHhhcccccceeeeee--cccCC
Q 003372 116 KSLVP-----------FVGRILRIERLAE-EILDQASP-DG-SIWTLDVFIETFLKQLRSAANKIVGLKSIAA--YRSGL 179 (825)
Q Consensus 116 ~~~~~-----------~~~~i~rie~~~~-~~~~~~~~-~~-~~~~~~~~~~al~~~l~~~~~~~vgfks~~a--y~~Gl 179 (825)
++++. |+|++|+||...+ ++++++++ ++ +|.+|++|++||++|+++ |+++|| +||||
T Consensus 182 ~~l~~~~f~~~v~PafRpD~~l~ie~~~f~~~v~~L~e~sg~~i~s~~~~~~AL~~r~~~-------F~~~Gc~asdhgl 254 (497)
T 2q01_A 182 AAIRESGWGGHVITAYRPDAVIDFEDERSPRAFERFAETSGQDVYSWKSYLEAHRLRRQA-------FIDAGATSSDHGH 254 (497)
T ss_dssp HHHHHSSCCCCEECCBCCCTTTCTTCTTHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHH-------HHHTTCCEEEECC
T ss_pred HHHhhCCCCceeeeccCchhhcCCCcccHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH-------HHHcCCEEeccCC
Confidence 98531 3679999998766 88888776 34 788999999999999999 455555 79999
Q ss_pred CCCCC--CCHHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEeeCC------------C-CCCCC--
Q 003372 180 EINPH--VTKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGF------------G-DKDLD-- 242 (825)
Q Consensus 180 ~~~~~--~~~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~~~e~glpvq~H~G~------------g-d~~~~-- 242 (825)
+..+. ++.++++++|+|+++++. ...+...+..+++..++++|.++|||||+|+|+ | |+|.|
T Consensus 255 ~~~~~~~~s~~e~~~if~k~l~g~~-s~~e~~~~~~~ll~~l~~~~~e~gw~mQlH~Ga~Rn~n~~m~~~~G~d~G~D~~ 333 (497)
T 2q01_A 255 PTAATADLSDVEAEALFNSLVKGDV-TPEKAELFRAQMLTEMAKMSLDDGLVMQIHPGSHRNHNVGLLNSHGRDKGADIP 333 (497)
T ss_dssp SSCCCCCCCHHHHHHHHHHHHHTCC-CHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEECCCCHHHHHHTCSSSSCCEE
T ss_pred cccCCCCCCHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHhcCCcEEEeeccCCCCCHHHHHHcCCCCCCCCC
Confidence 83333 689999999999999742 333445678889999999999999999999998 4 55554
Q ss_pred --CCCCChh--chHHHHhhcCCCCcEEEEeCCCCc--hHHHHHHHHHhCCeeeeccccccCcccHHHHHHHHHHHHHHCC
Q 003372 243 --LRLSNPL--HLRAILEDKRFSKCRFVLLHASYP--FSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAP 316 (825)
Q Consensus 243 --~~~~~P~--~L~~l~~~~~~P~l~ivl~H~g~p--~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~ 316 (825)
...++|+ +|+.+. .+|+.|+|+.|+ +| |.+++++|+++|||||+|.+|||++. ++||.++++++++++|
T Consensus 334 ~~~~~a~~L~~lL~~l~---~~~~pktILy~L-np~~y~~elatlag~Fpkvq~G~~WWF~d~-~~gm~~ql~~l~el~~ 408 (497)
T 2q01_A 334 MRTEYVDALKPLLTRLG---NDPRLSIILFTL-DETTYSRELAPLAGHYPVLKLGPSWWFHDS-PEGMMRFREQVTETAG 408 (497)
T ss_dssp CCCCCTTTSHHHHHHHT---TCTTCCEEECCS-CTTHHHHTHHHHHTTCTTEEECCCCGGGCS-HHHHHHHHHHHHHHHC
T ss_pred CchHHHHHHHHHHHHHh---hcCCCCeEEEeC-CcchhHHHHHHHHccCCccccCCchhhccC-hHHHHHHHHHHHHhhc
Confidence 3456664 444433 455566666666 44 79999999999999999999999985 8999999999999999
Q ss_pred CCcEE-EecCCCCCcchhhh-hHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCCCCccc
Q 003372 317 TKKVM-FSTDAYASPETYFL-GAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGVKD 386 (825)
Q Consensus 317 ~~kil-fgSD~~~~P~~~~~-~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~~~~~~ 386 (825)
++||+ |+||+|+|++ |+ ++++|||+||++|++||.++.|+++||.+++++|+++||+|+|+|+..+..
T Consensus 409 lskfvGmlTDsRsflS--y~~RheyfRRiLc~vLg~~V~~~~lse~eA~r~a~~l~~~Na~r~Y~l~~~~~~ 478 (497)
T 2q01_A 409 FYNTVGFNDDTRAFLS--IPARHDVARRVDSAFLARMVAEHRMDLVEAEELIVDLTYNLPKKAYKLDQRPDW 478 (497)
T ss_dssp STTBCCCCCCCSCGGG--HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHTTCCSCCTT
T ss_pred hhcccccccchhHhhh--hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhHHHHhCCCCCccc
Confidence 99999 9999999985 77 999999999999999999999999999999999999999999999987753
No 14
>3o6x_A Glutamine synthetase; type III, beta barrel,dodecamer, ligas; HET: P3S ADP; 3.50A {Bacteroides fragilis}
Probab=100.00 E-value=1.4e-51 Score=473.64 Aligned_cols=270 Identities=20% Similarity=0.257 Sum_probs=218.2
Q ss_pred CCcEEEEEecCC-cEeccCCCcccceeEEEEcCCCC------cCCCChHHHHHHHHHHHHHhcCc-----eEEEeeeeEE
Q 003372 466 TGEIRLMPDLST-RWRIPWQKQEEMIMADMHLKPGE------PWEYCPREALRKVSRLLKEEFNL-----VLNAGFEIEF 533 (825)
Q Consensus 466 ~~d~~L~PD~sT-~~~~p~~~~~a~v~~~~~~~~g~------p~~~~pR~~L~~~~~~~~~~~g~-----~~~~g~E~EF 533 (825)
..++++.||++| .++.| ++..|.|.+++.+|+ |+..|||++|+++++.++ .+|. ++.+|+|+||
T Consensus 143 earg~~~~D~ts~afi~~---~TL~IP~~f~s~~Ge~ld~ktPL~rsPR~ilk~A~~~Lk-~~G~d~~~v~~~~G~E~EF 218 (729)
T 3o6x_A 143 EARGYTAWDGSSPAFVVD---TTLCIPTIFISYTGEALDYKTPLLKALAAVDKAATEVCQ-LFDKNITRVFTNLGWEQEY 218 (729)
T ss_dssp -----CCBCSSSCCEEET---TEEECCBCCC----CCCBSHHHHHHHHHHHHHHHHHHHH-TSSSCCCCEEEEEEEEECE
T ss_pred hccCceecCCCCCeEEeC---CeEEEEEEEEeCCCCcCCCCCchhhCHHHHHHHHHHHHH-HcCCCCccceEEEEeccEE
Confidence 358899999999 77776 688888988887775 688999999999999998 6897 6999999999
Q ss_pred EEEeecccC--------CC--CCCccCC----CCCcCcCCccCCchHHHHHHHHHHHhCCCCeeeeecCCCCCceEEecC
Q 003372 534 YLLKSVLRE--------GK--EEWVPID----FTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLHAEAGKGQFEIALG 599 (825)
Q Consensus 534 ~l~~~~~~~--------~~--~~~~p~~----~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~ 599 (825)
|||++.... |. .+..|.. +.+||...+ +...+++++|++.|+++||+|++.|+|+|||||||++.
T Consensus 219 FLfd~~~~~~r~dl~~tGrtl~G~~P~kgq~l~d~Yf~~~p-d~~~~~~~di~~~L~~~GI~ve~~H~EvaPGQ~EI~~~ 297 (729)
T 3o6x_A 219 FLVDTSLYNARPDLRLTGRTLMGHSSAKDQQLEDHYFGSIP-PRVTAFMKELEIECHKLGIPVKTRHNEVAPNQFELAPI 297 (729)
T ss_dssp EEEEHHHHHSCTTHHHHSSCSCCCC--------------CC-HHHHHHHHHHHHHHHHHTCCEEEECBCSSTTEECCEEC
T ss_pred EEEecchhccCcccccccccccCCCCCCCCCCCCccCCCCc-hhHHHHHHHHHHHHHHCCCCeEEeecCCCCCceEeccC
Confidence 999974211 11 1122221 137887766 77889999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHCCCeEEeccc---------------ccCC-CCcccccCCCCCCC---CCcHHHHHH
Q 003372 600 HTVAAKAADNLIFTREVLRAVARKHGLLATFVPN---------------LWQN-GENVFMASDSSSKH---GMSSVGEKF 660 (825)
Q Consensus 600 ~~~~l~aaD~~~~~r~~i~~iA~~~Gl~AtF~pK---------------l~~~-g~n~f~~~~~~~~~---~ls~~~~~f 660 (825)
|.++++|||+++++|++||+||++||+.|||||| +|++ |+|+|... +++. ++|..+++|
T Consensus 298 ~~~al~AAD~~~l~K~vvK~VA~~hGl~ATFMPKP~~g~nGSG~HvH~SL~~~~G~NLF~~~--d~~~~~~~~s~~~~~f 375 (729)
T 3o6x_A 298 FENCNLANDHNQLVMDLMKRIARKHHFAVLFHEKPYNGVNGSGKHNNWSLCTDTGINLFAPG--KNPKGNMLFLTFLVNV 375 (729)
T ss_dssp CEEHHHHHHHHHHHHHHHHHHHHHTTEEEECSSCSSTTSCCCBEEEEEEEEETTCCCSSCCC--SSTTTCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhCCEEEEecccCCCCCCCcceeeccccCCCCCcCCCCC--CCccchhhHHHHHHHH
Confidence 9999999999999999999999999999999999 4544 88888733 2333 458889999
Q ss_pred HHHHHHHHHHHHhhhCCCCCCccCCCCCCcCCcc----------------cc-----------------cc---------
Q 003372 661 MAGVLHHLSSILAFTAPVPNSYDRIQPNTWSGAY----------------QC-----------------WG--------- 698 (825)
Q Consensus 661 iaGil~h~~al~a~~~P~~nSY~Rl~~g~~ap~~----------------~~-----------------WG--------- 698 (825)
|+|||+|+++|+||++|++||| || ||+|||++ +. ||
T Consensus 376 IaGVLkHa~aL~A~~aPt~NSY-RL-~g~EAP~~iisi~lG~~l~~vl~~i~~~~~g~~~~~~~~~~~~~Gv~~lP~~~~ 453 (729)
T 3o6x_A 376 LMMVHKNQDLLRASIMSAGNSH-RL-GANEAPPAILSIFLGSQLSATLDEIVRQVTNSKMTPEEKTTLKLGIGRIPEILL 453 (729)
T ss_dssp HHHHHHTHHHHHHHSCCHHHHT-TS-SSSSCCCSCCCEECCHHHHHHHHCC-----------------------------
T ss_pred HHHHHHhHHHHHHHhCCCcccc-cc-CCCcCCchhhhhhhhHHHHHHHHHHHhhccCCCCCccccccccCCcccCCCCcc
Confidence 9999999999999999999999 99 99999987 44 34
Q ss_pred ---cCCCCCcccccCCCCCCCCCcceEEecCCCCCCC---hHHHHHHHHHHHHHHHhc-cCC
Q 003372 699 ---KENREAPLRTACPPGVKDGVVSNFELKSFDGCAN---PHLGLAAIIASGIDGLRR-LCL 753 (825)
Q Consensus 699 ---~~NR~a~iRv~~~~~~~~~~~~~~E~R~~d~~aN---PYL~lAailaAgl~Gi~~-l~~ 753 (825)
.+||++|+|+. | +|||+|++|+++| |||++++|+|+||+||++ |+-
T Consensus 454 d~~drNRTspfaft---G------nrfEfR~~Gss~n~a~P~l~lnaivA~~L~gi~~~Le~ 506 (729)
T 3o6x_A 454 DTTDRNRTSPFAFT---G------NRFEFRAAGSSANCAAAMIAINAAMANQLNEFKASVDK 506 (729)
T ss_dssp ----CCCSSSSCBC---S------SSEEETTSBSSSCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CcCccccCCCcccc---C------CeeEEecCCcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 39999999985 3 4999999999999 999999999999999999 875
No 15
>2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A*
Probab=100.00 E-value=1.1e-36 Score=334.46 Aligned_cols=336 Identities=15% Similarity=0.127 Sum_probs=245.5
Q ss_pred hHHHHHhccCCcccccCCCcccCC-CCcchhhccccc-------------cCCC------------ccCCCcch--hhhh
Q 003372 4 EELREVVENIELVDGHAHNIVSLD-SSFPFIQSFSEA-------------TGPA------------LSYAPYSL--SFKR 55 (825)
Q Consensus 4 ~~l~~~i~~~p~iD~H~H~~~~~~-~~~~~~~~~~ea-------------~~~~------------~~~~~~~~--~~~~ 55 (825)
.+|++.++++||||-|||-.-..- .+. |.. ++|- .|-. .+.. ++. .|.|
T Consensus 13 ~~Ly~~a~~~PIiDyH~HL~P~~iae~~-f~n-i~elwgdHYkw~r~mRa~Gv~e~~~iT~s~~ekA~~v-gnplflyhW 89 (437)
T 2qee_A 13 EKVKNAVNNQPVTDMHTHLFSPNFGEIL-LWD-IDELLTYHYLVAEVMRWTDVSIEAFWAMSKREQADLI-WEELFIKRS 89 (437)
T ss_dssp HHHHHHHHHSCEEECSCSCCCGGGCTTS-BCS-HHHHHTSHHHHHHHHTTCCSCHHHHHHSCHHHHHHHH-HHHHHTSSC
T ss_pred HHHHHHHhcCCeeccccCCCHHHHHhcc-cCC-HHhccccHHHHHHHHHHcCCCHHHhcCCCHHHHHHHh-CCCcceeec
Confidence 367888899999999999764320 111 211 1111 1100 0001 222 4556
Q ss_pred HHHH--------HHhhhCCCC---CHHHHHHHHH-HcCcccHHHHHHhhCCcEEEEEecCCCCCCCCChH---HHHhhcc
Q 003372 56 NLKN--------IAELYGCDS---SLQAVEEYRR-AAGLQSICSICFEAANISAVLIDDGLKLDKKHGLD---WHKSLVP 120 (825)
Q Consensus 56 ~~~~--------l~~~fg~~~---~~~~i~~~~~-~l~~~~~~r~ll~~~~v~~~~~d~g~~~d~~~~~~---~h~~~~~ 120 (825)
..+| |++ |||+. ||++ |++++ +++.+.++|.+|++|||+++|| ||||+|+|+ ||+++-.
T Consensus 90 ~hlEa~~~~~t~L~r-FGid~~~~ta~~-~~~~n~~l~~~~~~r~ll~~~nV~~v~T----TdDP~D~Le~~~~h~~~f~ 163 (437)
T 2qee_A 90 PVSEACRGVLTCLQG-LGLDPATRDLQV-YREYFAKKTSEEQVDTVLQLANVSDVVM----TNDPFDDNERISWLEGKQP 163 (437)
T ss_dssp CCSHHHHHHHHHHHH-TTCCGGGCCHHH-HHHHHHTCCHHHHHHHHHHHTTEEEEEC----CBCTTSHHHHHHHHTTCCC
T ss_pred hhhhcccchhHHHHH-cCCCCCccCHHH-HHHHHHHhCcccHHHHHHHHcCCeEEEe----CCCCCCchhhhHHHhhcCC
Confidence 6777 999 99997 9999 99997 5666655999999999999999 899999999 9999432
Q ss_pred --CCCeEEeccchH---HHHHHhhCCCC-Cc------ccHHHHHHHHHHHHHhhcccccceeeeee--cccCCCC-CCCC
Q 003372 121 --FVGRILRIERLA---EEILDQASPDG-SI------WTLDVFIETFLKQLRSAANKIVGLKSIAA--YRSGLEI-NPHV 185 (825)
Q Consensus 121 --~~~~i~rie~~~---~~~~~~~~~~~-~~------~~~~~~~~al~~~l~~~~~~~vgfks~~a--y~~Gl~~-~~~~ 185 (825)
++-..+|+.++. .+++.+|+++| +| .+|+++++||++|. ++.|| .+|||+. ...+
T Consensus 164 ~~rv~Pa~RpD~~l~~f~~~v~~L~~sg~~i~~~~~~~t~~~~~~AL~~rF----------~~~Gc~~sDh~l~~~~~~~ 233 (437)
T 2qee_A 164 DSRFHAALRLDPLLNEYEQTKHRLRDWGYKVNDEWNEGSIQEVKRFLTDWI----------ERMDPVYMAVSLPPTFSFP 233 (437)
T ss_dssp CTTEECCEECHHHHHCHHHHHHHHHHTTCCCCSSCSHHHHHHHHHHHHHHH----------HHHCCSCEEEEECTTCCSS
T ss_pred CceEeecCCchHHHhhHHHHHHHHHhcCCCcccCcccCCHHHHHHHHHHHH----------HHhCCEEEEecCCcCcCCC
Confidence 333455666643 26776666644 66 78999999999983 33455 4889865 2222
Q ss_pred CHHHHHHHHHHHHhCCCCCcCCchhhhhHHHHHHHHHHhhCCCcEEEeeCCC-CC------CCC-CCCCChhchHHHHhh
Q 003372 186 TKKDAEEGLAEDLRSGKPVRITNKSLIDYIFISSLEVAQFLDLPLQIHTGFG-DK------DLD-LRLSNPLHLRAILED 257 (825)
Q Consensus 186 ~~~ea~~~~~r~l~~~~~~~~~~~~l~d~~l~~l~e~~~e~glpvq~H~G~g-d~------~~~-~~~~~P~~L~~l~~~ 257 (825)
+..+ ...+..+.++++|.|+|||||+|+|.- +. |.| ...+++..|..++.
T Consensus 234 ~~~~---------------------~~~~~~~~l~~~~~e~gwvmQlHiGa~Rn~n~~~~~g~D~i~~~~~~~L~~ll~- 291 (437)
T 2qee_A 234 EESN---------------------RGRIIRDCLLPVAEKHNIPFAMMIGVKKRVHPALGDAGDFVGKASMDGVEHLLR- 291 (437)
T ss_dssp CSSH---------------------HHHHHHHTHHHHHHHHTCCEEEEECEETTSSGGGGGGGCEECCCCSHHHHHHHH-
T ss_pred CCCH---------------------HHHHHHHHHHHHHHhCCCeEEEecCcccCCCHHhccCCCCCCccCHHHHHHHHH-
Confidence 1111 133344448899999999999999983 11 222 12223356788888
Q ss_pred cCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeeccccccCcccHHHHHHHHHHHHHHCCCCcEE-EecCCCCCcchhhhh
Q 003372 258 KRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVM-FSTDAYASPETYFLG 336 (825)
Q Consensus 258 ~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kil-fgSD~~~~P~~~~~~ 336 (825)
+||+.+|...+.......+++.++++|||||++.+|||++. ++||+++++.+++..+ .+++ |.||+|+|.. ++++
T Consensus 292 -~~~~~~lpktiLn~~~n~elat~ag~Fpnvq~g~~WWF~d~-p~gm~~q~~~~l~lL~-~~fvGmlTDsRsfls-yi~R 367 (437)
T 2qee_A 292 -EYPNNKFLVTMLSRENQHELVVLARKFSNLMIFGCWWFMNN-PEIINEMTRMRMEMLG-TSFIPQHSDARVLEQ-LIYK 367 (437)
T ss_dssp -HCTTSCEEEEESCGGGHHHHHHHHHHCTTEEEBCCCGGGCS-HHHHHHHHHHHHHHHT-TCSBCCCCCCSBTTH-HHHH
T ss_pred -hCcccCCCeeecChhhHHHHHHHHccCCcceecCcccccCC-HHHHHHHHHHHHHHhC-cCcccCccchhHHhc-cchH
Confidence 78887776666655667899999999999999999999885 8999999999988888 6666 9999999985 2379
Q ss_pred HHHHHHHHHHHHHhh----hcCCCCChHH--HHHHHHHHHHHhHHHHhcCCCCcc
Q 003372 337 AKRAREVVFSVLRDT----CIDEDLSVGE--AIEVAKDIFALNAAQFYKINLGVK 385 (825)
Q Consensus 337 ~~~~r~~l~~~l~~~----v~~g~l~~~~--a~~~~~~Il~~NA~rly~L~~~~~ 385 (825)
+++|||+||++|++| |++|.++ ++ .++++++|||+||+++|++..-+.
T Consensus 368 heyfRRilc~~Lg~~~~~lve~G~~p-d~~~l~~~v~~I~y~Na~~yf~~~~~~~ 421 (437)
T 2qee_A 368 WHHSKSIIAEVLIDKYDDILQAGWEV-TEEEIKRDVADLFSRNFWRFVGRNDHVT 421 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHTHHHHHHHTCC----
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCCCC-CHHHHHHHHHHHHHHHHHHHhcccccee
Confidence 999999999999999 9999999 44 569999999999999999986654
No 16
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=99.78 E-value=1.2e-18 Score=187.52 Aligned_cols=189 Identities=20% Similarity=0.259 Sum_probs=139.2
Q ss_pred hhcccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhCC-CCCcC------CchhhhhHHHHHHHHHHhhCCCcEEEe
Q 003372 161 SAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVRI------TNKSLIDYIFISSLEVAQFLDLPLQIH 233 (825)
Q Consensus 161 ~~~~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~~-~~~~~------~~~~l~d~~l~~l~e~~~e~glpvq~H 233 (825)
.++++++||.. ++|. +.+++.++++++...+ .+.+. ....+++..+.++|+.|+++|+||++|
T Consensus 88 ~~p~r~~~~~~---------v~p~-~~~~a~~eL~~~~~~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH 157 (291)
T 3irs_A 88 AYPDKFHPVGS---------IEAA-TRKEAMAQMQEILDLGIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMM 157 (291)
T ss_dssp HSTTTEEEEEE---------CCCS-SHHHHHHHHHHHHHTTCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEE
T ss_pred HCCCcEEEEEe---------cCcc-CHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEe
Confidence 46778888887 6665 4566777888833322 22221 123467889999999999999999999
Q ss_pred eCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeeccccccCcccHHHHHHHHHHHHH
Q 003372 234 TGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLE 313 (825)
Q Consensus 234 ~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le 313 (825)
+|... +.+..+++|..+.++++ +||+++||+.|+|+||..++..++..++|||+|+|+++... + +. ..+.++++
T Consensus 158 ~~~~~-~~~~~~~~p~~~~~v~~--~~P~l~ivl~H~G~~~~~~~~~l~~~~~nvy~~~Sg~~~~~-~-~~-~~~~~~~~ 231 (291)
T 3irs_A 158 TGGNA-GPDITYTNPEHIDRVLG--DFPDLTVVSSHGNWPWVQEIIHVAFRRPNLYLSPDMYLYNL-P-GH-ADFIQAAN 231 (291)
T ss_dssp CSSSC-SSSGGGGCHHHHHHHHH--HCTTCCEEEEGGGTTCHHHHHHHHHHCTTEEEECGGGGSSS-T-TH-HHHHHHHT
T ss_pred CCCCC-CCCCccCCHHHHHHHHH--HCCCCEEEeecCCcccHHHHHHHHhHCCCeEecHHHHhccC-C-CH-HHHHHHHH
Confidence 98641 22455678888999999 89999999999999999988888889999999999986422 1 22 24566788
Q ss_pred HCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCCCC
Q 003372 314 LAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (825)
Q Consensus 314 ~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~~~ 383 (825)
..|.+||||||| ||... .. ..+ +.+.+ -.++. +.+++|+++||+|||+++..
T Consensus 232 ~~g~drllfgSD---~P~~~--~~----~~~-~~~~~----l~l~~----e~~~~i~~~NA~rl~~~~~~ 283 (291)
T 3irs_A 232 SFLADRMLFGTA---YPMCP--LK----EYT-EWFLT----LPIKP----DAMEKILHGNAERLLAQAGR 283 (291)
T ss_dssp TGGGGTBCCCCC---BTSSC--HH----HHH-HHHHT----SSCCH----HHHHHHHTHHHHHHHHHSCC
T ss_pred HhCcceEEEecC---CCCCC--HH----HHH-HHHHH----CCCCH----HHHHHHHHHHHHHHhCcccc
Confidence 899999999999 77432 11 111 11222 24564 68999999999999998754
No 17
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=99.72 E-value=5.1e-17 Score=176.59 Aligned_cols=190 Identities=18% Similarity=0.208 Sum_probs=130.6
Q ss_pred HHHhhccccc-ceeeeeecccCCCCCCCCCHHHHHHHHHHHHhC-C-CCCc----CCchhhhhHHHHHHHHHHhhCCCcE
Q 003372 158 QLRSAANKIV-GLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVR----ITNKSLIDYIFISSLEVAQFLDLPL 230 (825)
Q Consensus 158 ~l~~~~~~~v-gfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~-~-~~~~----~~~~~l~d~~l~~l~e~~~e~glpv 230 (825)
.++.++++++ ||.. +++. +++++.++++|++.. + ++.+ .....++|..+.|+|+.|+++|+||
T Consensus 89 ~~~~~p~rf~g~~a~---------vp~~-~~~~a~~el~r~~~~~G~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g~pv 158 (312)
T 3ij6_A 89 LVDQHPGKFAGAVAI---------LPMN-NIESACKVISSIKDDENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVPL 158 (312)
T ss_dssp HHHHCTTTEEEEEEE---------CCTT-CHHHHHHHHHHHHHCTTEEEEEEESEETTEETTSTTTHHHHHHHHHTTCCE
T ss_pred HHHhCCCceeeeEEe---------cCcc-CHHHHHHHHHHHHHhCCCceEeccCCCCCCCCCCccHHHHHHHHHHcCCeE
Confidence 3445788888 6887 5544 678899999999864 2 2222 2345678889999999999999999
Q ss_pred EEeeCCCCCCCCCC--CC----Ch-----hchHHHHhhcCCCCcEEEEeCCC--CchHHHHHH------HHHhCCeeeec
Q 003372 231 QIHTGFGDKDLDLR--LS----NP-----LHLRAILEDKRFSKCRFVLLHAS--YPFSKEASY------LAYVYPQVYLD 291 (825)
Q Consensus 231 q~H~G~gd~~~~~~--~~----~P-----~~L~~l~~~~~~P~l~ivl~H~g--~p~~~e~~~------la~~~pNVyld 291 (825)
++|+|.+....... .. .+ +.+.++++ +||++|||+.|+| .||..+... .+..++|||+|
T Consensus 159 ~iH~g~~~~~p~~~~~~~~~~~~~~~~~~li~~gv~~--rfP~Lkii~~H~Gg~~P~~~~r~~~~~~~~~~~~~~nvy~d 236 (312)
T 3ij6_A 159 WMHPVFDARKPDNNLVFSWEYELSQAMLQLVQSDLFQ--DYPNLKILVHHAGAMVPFFSGRIDHILDEKHAQDFKKFYVD 236 (312)
T ss_dssp EEECCCCTTSSSCCTTTHHHHHHHHHHHHHHHTTHHH--HCTTCCEEESGGGTTTTTSHHHHHHHSCHHHHHHGGGCEEE
T ss_pred EEcCCCCCCCCCcccccccHHHHHHHHHHHHHcChHh--hCCCCeEEecCCcccHHHHHHHHHHhcccchHHHcCeEEEe
Confidence 99998642211100 00 11 22357888 9999999999997 577655432 34578999999
Q ss_pred cccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhh--HHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHH
Q 003372 292 FGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG--AKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDI 369 (825)
Q Consensus 292 ~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~--~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~I 369 (825)
+|+.+. ...++.+++..|.+||||||| ||...++. .....+. +++-.++. +.+++|
T Consensus 237 ts~~~~-------~~~l~~~~~~~g~drilfgSD---~P~~~~p~~~~~~~~~~--------l~~l~l~~----~~~~~i 294 (312)
T 3ij6_A 237 TAILGN-------TPALQLAIDYYGIDHVLFGTD---APFAVMPSGADQIITQA--------INDLTISD----KDKQKI 294 (312)
T ss_dssp CCSSSC-------HHHHHHHHHHHCGGGEECCCC---BTSSSTTTCSHHHHHHH--------HHTSSSCH----HHHHHH
T ss_pred CCCCCC-------HHHHHHHHHhCCCCeEEEeCC---CCCCcCCCcchHHHHHH--------HHHcCCCH----HHHHHH
Confidence 997642 235778888999999999999 77432221 1112222 22224664 689999
Q ss_pred HHHhHHHHhcCC
Q 003372 370 FALNAAQFYKIN 381 (825)
Q Consensus 370 l~~NA~rly~L~ 381 (825)
+++||+|+|+-+
T Consensus 295 ~~~NA~rl~~~~ 306 (312)
T 3ij6_A 295 FHDNYYSLIKEG 306 (312)
T ss_dssp HTHHHHHHHCC-
T ss_pred HHHHHHHHHhCc
Confidence 999999999864
No 18
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=99.69 E-value=4.6e-17 Score=180.87 Aligned_cols=187 Identities=18% Similarity=0.257 Sum_probs=130.9
Q ss_pred HHHHhhcccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhC-C-CCCcC----CchhhhhHHHHHHHHHHhhCCCcE
Q 003372 157 KQLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVRI----TNKSLIDYIFISSLEVAQFLDLPL 230 (825)
Q Consensus 157 ~~l~~~~~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~-~-~~~~~----~~~~l~d~~l~~l~e~~~e~glpv 230 (825)
+.++.++++++||.+ +++. +++++.++++|++.. | ++.++ ....++|..++|+|+.|+++|+||
T Consensus 138 ~~~~~~P~Rf~g~a~---------v~~~-~~~~a~~EL~r~~~~~G~~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~pV 207 (373)
T 4inf_A 138 DACQKYPDRFIGMGT---------VAPQ-DPEWSAREIHRGARELGFKGIQINSHTQGRYLDEEFFDPIFRALVEVDQPL 207 (373)
T ss_dssp HHHHHSTTTEEECBC---------CCTT-SHHHHHHHHHHHHHTSCCCCEEECSCBTTBCTTSGGGHHHHHHHHHHTCCE
T ss_pred HHHHhCCCEEEEEEe---------cCCC-CHHHHHHHHHHHHhhcCceEEEECCCCCCCCCCCcchHHHHHHHHHcCCeE
Confidence 334567889999988 7665 677788999999975 3 33222 234678889999999999999999
Q ss_pred EEeeCCCCCCCC-----CCCCC--------------hhchHHHHhhcCCCCcEEEEeCCC--CchHHHHHHHHH------
Q 003372 231 QIHTGFGDKDLD-----LRLSN--------------PLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASYLAY------ 283 (825)
Q Consensus 231 q~H~G~gd~~~~-----~~~~~--------------P~~L~~l~~~~~~P~l~ivl~H~g--~p~~~e~~~la~------ 283 (825)
++|+|.+..... ..... .+.+.++++ +||++|||+.|+| .||..+....+.
T Consensus 208 ~iH~g~~~~~~~~p~~~~~~~~~~~g~~~et~~~~~~Li~~gv~~--rfP~LkiilaH~Gg~~P~~l~Rld~~~~~~~~~ 285 (373)
T 4inf_A 208 YIHPATSPDSMIDPMLEAGLDGAIFGFGVETGMHLLRLITIGIFD--KYPSLQIMVGHMGEALPYWLYRLDYMHQAGVRS 285 (373)
T ss_dssp EECCCCCCTTTCHHHHHHTCSSTTTHHHHHHHHHHHHHHHHTHHH--HCTTCCEEECHHHHTTTTTHHHHHHHHHHHHHH
T ss_pred EECCCCCCccccccccccccchhhhhhHHHHHHHHHHHHHcCchh--hCcCCeEEEecccchHHHHHHHHHHHHhhcccc
Confidence 999997532110 00000 123567888 9999999999997 688543322111
Q ss_pred ----------------hCCeeeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHH
Q 003372 284 ----------------VYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSV 347 (825)
Q Consensus 284 ----------------~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~ 347 (825)
..+|||+|+|+++. ...++.+++..|.+||||||| ||.. .... ..+
T Consensus 286 ~~~~~~~~l~~~pse~~~~nvy~d~sg~~~-------~~~l~~~~~~~g~drilfgSD---~P~~--~~~~-~~~----- 347 (373)
T 4inf_A 286 QRYERMKPLKKTIEGYLKSNVLVTNSGVAW-------EPAIKFCQQVMGEDRVMYAMD---YPYQ--YVAD-EVR----- 347 (373)
T ss_dssp TCCTTCCCCSSCHHHHHHHTEEEECTTCCC-------HHHHHHHHHHHCGGGEECCCC---TTTT--CCHH-HHH-----
T ss_pred ccccccccccCCHHHHHhcCeEEeeccccc-------HHHHHHHHHHcCcceEEEecC---CCCC--ccHH-HHH-----
Confidence 13699999998653 246788888999999999999 7732 2221 111
Q ss_pred HHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcC
Q 003372 348 LRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (825)
Q Consensus 348 l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L 380 (825)
.++...++. +.+++|+++||+|||+|
T Consensus 348 ---~l~~~~l~~----e~~~~I~~~NA~rlf~L 373 (373)
T 4inf_A 348 ---AMDAMDMSA----QTKKKFFQTNAEKWFKL 373 (373)
T ss_dssp ---HHHTCSCCH----HHHHHHHTHHHHHHTTC
T ss_pred ---HHHhCCCCH----HHHHHHHhHHHHHHhCc
Confidence 222234664 68999999999999986
No 19
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=99.66 E-value=5.5e-17 Score=179.38 Aligned_cols=189 Identities=17% Similarity=0.202 Sum_probs=130.2
Q ss_pred HHHHhhcccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhC-C-CCCc----CCchhhhhHHHHHHHHHHhhCCCcE
Q 003372 157 KQLRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVR----ITNKSLIDYIFISSLEVAQFLDLPL 230 (825)
Q Consensus 157 ~~l~~~~~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~-~-~~~~----~~~~~l~d~~l~~l~e~~~e~glpv 230 (825)
+.++.++++++||.+ +++. +++++.++++|++.. | ++.+ .....++|..++|+|+.|+++|+||
T Consensus 120 ~~~~~~P~Rf~g~a~---------v~~~-~~~~a~~El~r~~~~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV 189 (357)
T 3nur_A 120 NYIAQYPNRFVGFAT---------LPIN-EPEAAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPI 189 (357)
T ss_dssp HHHHHSTTTEEECBC---------CCTT-SHHHHHHHHHHHHHTTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCE
T ss_pred HHHHhCCCEEEEEEe---------CCCC-CHHHHHHHHHHHHhhcCceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeE
Confidence 334467889999988 6654 677889999999853 2 2322 2244678889999999999999999
Q ss_pred EEeeCCCCCC-C----CCCCC----------------------ChhchHHHHhhcCCCCcEEEEeCCC--CchHHHHHHH
Q 003372 231 QIHTGFGDKD-L----DLRLS----------------------NPLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASYL 281 (825)
Q Consensus 231 q~H~G~gd~~-~----~~~~~----------------------~P~~L~~l~~~~~~P~l~ivl~H~g--~p~~~e~~~l 281 (825)
++|+|.+... . ...+. .++.+.++++ |||++|||+.|+| .||..+....
T Consensus 190 ~iH~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~~~~~~li~~gv~~--rfP~LkiilaH~Gg~~P~~~~rld~ 267 (357)
T 3nur_A 190 YLHPAPVNSDIYQSYYKGNYPEVTAATFACFGYGWHIDVGIHAIHLVLSGIFD--RYPKLNMIIGHWGEFIPFFLERMDE 267 (357)
T ss_dssp EEECCCCCHHHHHHHTCCSSCHHHHHHHHTTTTHHHHHHHHHHHHHHHTTHHH--HSTTCCEEECGGGTTGGGGHHHHHH
T ss_pred EEecCCCCccccccccccCcccchhhhhhhhhhchhHHHHHHHHHHHHcCchh--hCCCCeEEEecccccHHHHHHHHHh
Confidence 9999874210 0 00000 0124667788 9999999999997 6886544332
Q ss_pred HH------------hCCeeeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHH
Q 003372 282 AY------------VYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLR 349 (825)
Q Consensus 282 a~------------~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~ 349 (825)
+. ..+|||+|+|+++.. ..++.+++..|.+||||||| ||... ... ..
T Consensus 268 ~~~~~~l~~~ps~~~~~nvy~~~sg~~~~-------~~l~~~~~~~g~drilfgSD---~P~~~--~~~-~~-------- 326 (357)
T 3nur_A 268 ALFAEHLNHSVSYYFKNSFYITPSGMLTK-------PQFDLVKKEVGIDRILYAAD---YPYIE--PEK-LG-------- 326 (357)
T ss_dssp HSCCTTSSSCHHHHHHHSEEECCTTCCCH-------HHHHHHHHHHCGGGBCBCCC---TTTCC--CTT-HH--------
T ss_pred hhccccccCCHHHHHHhceeeecccCCCH-------HHHHHHHHHcCCceEEEeCC---CCCCC--chH-HH--------
Confidence 21 126999999986531 35677888899999999999 77322 111 11
Q ss_pred hhhcCCCCChHHHHHHHHHHHHHhHHHHhcCCC
Q 003372 350 DTCIDEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (825)
Q Consensus 350 ~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~~ 382 (825)
++++.-.++. +.+++|+++||+|||+|+.
T Consensus 327 ~~~~~~~l~~----~~~~~i~~~NA~rl~~l~~ 355 (357)
T 3nur_A 327 VFLDELGLTD----EEKEKISYTNGAKLLGLSS 355 (357)
T ss_dssp HHTTSSCCCH----HHHHHHHTHHHHHHHTC--
T ss_pred HHHHHcCCCH----HHHHHHHhHHHHHHhCCCC
Confidence 2233334664 6899999999999999864
No 20
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=99.63 E-value=3.4e-15 Score=158.58 Aligned_cols=180 Identities=17% Similarity=0.165 Sum_probs=127.5
Q ss_pred HhhcccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhCC--CCC---cCCchhhhhHHHHHHHHHHhhC-CCcEEEe
Q 003372 160 RSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG--KPV---RITNKSLIDYIFISSLEVAQFL-DLPLQIH 233 (825)
Q Consensus 160 ~~~~~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~~--~~~---~~~~~~l~d~~l~~l~e~~~e~-glpvq~H 233 (825)
+.++++++||.. +++....+++.+++++++... .+. -++. . .+..+.++++.|+++ |+||++|
T Consensus 82 ~~~p~~~~~~g~---------~p~~~~~~~~~~el~~~~~~~g~~gi~~~g~~~-~-~~~~~~~~~~~a~~~~~lpv~iH 150 (272)
T 3cjp_A 82 QAYPSRYVGFGN---------VPVGLSENDTNSYIEENIVNNKLVGIGELTPAS-G-QIKSLKPIFKYSMDSGSLPIWIH 150 (272)
T ss_dssp HHSTTTEEEEEC---------CCTTCCHHHHHHHHHHHTTTTTCSEEEEECCCT-T-CGGGGHHHHHHHHHTTCCCEEEC
T ss_pred HhCCCeEEEEEE---------eCCCCCcHHHHHHHHHHHHhcCceEEEecCCCC-C-ccHHHHHHHHHHHhccCCcEEEe
Confidence 345677777765 444433456778888887532 111 1122 3 667899999999999 9999999
Q ss_pred eCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeeccccccCcccHHHHHHHHHHHHH
Q 003372 234 TGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLE 313 (825)
Q Consensus 234 ~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le 313 (825)
+|.+. ....+..+.++++ +||+++||+.|+|.++..++..++..++|||+|+|+.+.. ..++.+++
T Consensus 151 ~~~~~-----~~~~~~~~~~~l~--~~p~l~iv~~H~G~~~~~~~~~~~~~~~~~y~~~s~~~~~-------~~~~~~~~ 216 (272)
T 3cjp_A 151 AFNPL-----VLQDIKEIAELCK--AFPKVPVILGHMGGSNWMTAVELAKEIQNLYLDTSAYFST-------FVLKIVIN 216 (272)
T ss_dssp CSTTC-----CHHHHHHHHHHHH--HSTTSCEEEGGGGGGGHHHHHHHHHHCTTEEEECTTCSCH-------HHHHHHHH
T ss_pred CCCCC-----ccccHHHHHHHHH--HCCCceEEEECCCCccHHHHHHHHHhCCCEEEEecccccH-------HHHHHHHH
Confidence 98531 1123557888898 8999999999999887777778888899999999986642 35677888
Q ss_pred HCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCCCC
Q 003372 314 LAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (825)
Q Consensus 314 ~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~~~ 383 (825)
..| +||||||| ||.. .....++.+. + ..++. +.+++|+++||+|||+++.-
T Consensus 217 ~~~-dril~gSD---~P~~---~~~~~~~~~~----~----~~l~~----~~~~~i~~~Na~rl~~l~~~ 267 (272)
T 3cjp_A 217 ELP-LKCIFGTD---MPFG---DLQLSIEAIK----K----MSNDS----YVANAVLGDNISRLLNIEGH 267 (272)
T ss_dssp HST-TTEECCCC---TTSS---CHHHHHHHHH----H----HCSSH----HHHHHHHTHHHHHHHTC---
T ss_pred hCC-CeEEEeCC---CCCC---ChHHHHHHHH----h----cCCCH----HHHHHHHHHHHHHHhCccCc
Confidence 888 99999999 6732 1222333332 1 24663 68999999999999999753
No 21
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=99.61 E-value=2.2e-15 Score=164.09 Aligned_cols=186 Identities=12% Similarity=0.097 Sum_probs=125.4
Q ss_pred HHhhcccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhC-C-CCCc----CC------chhhhhHHHHHHHHHHhhC
Q 003372 159 LRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVR----IT------NKSLIDYIFISSLEVAQFL 226 (825)
Q Consensus 159 l~~~~~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~-~-~~~~----~~------~~~l~d~~l~~l~e~~~e~ 226 (825)
.+.++++++||.. ++|. +++++.+++++++.. + .+.+ .. ...+.+..+.++++.|+++
T Consensus 88 ~~~~p~r~~~~~~---------v~p~-~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 157 (327)
T 2dvt_A 88 CAKRPDRFLAFAA---------LPLQ-DPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKL 157 (327)
T ss_dssp HHHCTTTEEEEEC---------CCTT-SHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHH
T ss_pred HhhCCCceEEEee---------cCcC-CHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHc
Confidence 3456778888876 6665 566788899999864 2 1111 11 3467888999999999999
Q ss_pred CCcEEEeeCCCCCCCCCCCC--------------------ChhchHHHHhhcCCCCcEEEEeCCC--CchHHHHHHH---
Q 003372 227 DLPLQIHTGFGDKDLDLRLS--------------------NPLHLRAILEDKRFSKCRFVLLHAS--YPFSKEASYL--- 281 (825)
Q Consensus 227 glpvq~H~G~gd~~~~~~~~--------------------~P~~L~~l~~~~~~P~l~ivl~H~g--~p~~~e~~~l--- 281 (825)
|+||++|++....+....+. .++.+.++++ +||+++||+.|+| +|+..+....
T Consensus 158 ~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~--~~P~l~~v~~H~gg~~p~~~~~~~~~~~ 235 (327)
T 2dvt_A 158 DVPFYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFD--EHPRLNIILGHMGEGLPYMMWRIDHRNA 235 (327)
T ss_dssp TCCEEEECCCCCGGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHH--HCTTCCEEESGGGTTHHHHHHHHHHTTT
T ss_pred CCeEEECCCCCCcchhhhhccchhhhcccccccHHHHHHHHHHHHcCcHh--hCCCCeEEEecccccHHHHHHHHHhhhh
Confidence 99999999753211000000 1223557888 8999999999997 5655332221
Q ss_pred -------------HHh--CCeeeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHH
Q 003372 282 -------------AYV--YPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFS 346 (825)
Q Consensus 282 -------------a~~--~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~ 346 (825)
+.. .+|||+|+|+.+. ...++.+++..|.+||||||| ||... .....+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~n~y~~~sg~~~-------~~~~~~~~~~~g~dril~gSD---~P~~~---~~~~~~~--- 299 (327)
T 2dvt_A 236 WVKLPPRYPAKRRFMDYFNENFHITTSGNFR-------TQTLIDAILEIGADRILFSTD---WPFEN---IDHASDW--- 299 (327)
T ss_dssp TCCSCCSSSCSSCHHHHHHHHEEEECTTCCC-------HHHHHHHHTTTCGGGEECCCC---TTTSC---HHHHHHH---
T ss_pred hccccccCCCCCCHHHHHhhcEEEeccCCCC-------HHHHHHHHHHhCcccEEEecC---CCCcc---HHHHHHH---
Confidence 112 2799999998653 246788899999999999999 77322 1111121
Q ss_pred HHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCC
Q 003372 347 VLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 347 ~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~ 381 (825)
+.+ -.++. +.+++|+++||+|||+++
T Consensus 300 -~~~----~~l~~----~~~~~i~~~Na~rl~~l~ 325 (327)
T 2dvt_A 300 -FNA----TSIAE----ADRVKIGRTNARRLFKLD 325 (327)
T ss_dssp -HHH----SSSCH----HHHHHHHTHHHHHHTTCC
T ss_pred -HHH----CCCCH----HHHHHHHHHhHHHHhCCC
Confidence 222 24664 579999999999999985
No 22
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=99.59 E-value=9.9e-15 Score=156.16 Aligned_cols=186 Identities=16% Similarity=0.130 Sum_probs=121.8
Q ss_pred hhcccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhCC-CCCc----C-CchhhhhHHHHHHHHHHhhCCCcEEEee
Q 003372 161 SAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVR----I-TNKSLIDYIFISSLEVAQFLDLPLQIHT 234 (825)
Q Consensus 161 ~~~~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~~-~~~~----~-~~~~l~d~~l~~l~e~~~e~glpvq~H~ 234 (825)
.+++++.||.. ++|.... ++++++...+ .+.+ . ....+.+..+.++++.|+++|+||.+|+
T Consensus 78 ~~p~r~~~~~~---------v~p~~~~----~el~~~~~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~ 144 (288)
T 2ffi_A 78 TVPGQLRGVVM---------LERDVEQ----ATLAEMARLGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHR 144 (288)
T ss_dssp HSTTTBCCBBC---------CCSSCCH----HHHHHHHTTTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECS
T ss_pred HCCCCEEEEEE---------eCCCCCH----HHHHHHHHCCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEee
Confidence 45667777765 4454332 4455555433 1111 1 1246778889999999999999999999
Q ss_pred CCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCch---------HHHHHHHHHhCCeeeeccccccCcccH----
Q 003372 235 GFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPF---------SKEASYLAYVYPQVYLDFGLAIPKLSV---- 301 (825)
Q Consensus 235 G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~---------~~e~~~la~~~pNVyld~s~~~~~~~~---- 301 (825)
+.. .+..+.++++ +|| ++||+.|+|.++ ..++..+ ..+||||+++|+++.....
T Consensus 145 ~~~---------~~~~~~~~~~--~~p-l~~vi~H~g~~~~~~~~~~~~~~~~~~l-~~~~n~y~~~sg~~~~~~~~~~~ 211 (288)
T 2ffi_A 145 QVA---------DIPVLVRALQ--PYG-LDIVIDHFGRPDARRGLGQPGFAELLTL-SGRGKVWVKVSGIYRLQGSPEEN 211 (288)
T ss_dssp CTT---------THHHHHHHHT--TTT-CCEEESGGGSCCTTSCTTCTTHHHHTTC-CCCSCEEEEEECGGGSSSCHHHH
T ss_pred chh---------hHHHHHHHHH--HCC-CCEEEECCCCCCCCCCCCChhHHHHHHH-HhCCCEEEEeCcchhhccccCCC
Confidence 843 3446788888 899 999999998765 3433333 3579999999987643211
Q ss_pred -HHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcC
Q 003372 302 -QGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (825)
Q Consensus 302 -~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L 380 (825)
......++.+++..|.+||||||| ||.........+.+.+ +.+.++ .++. +.+++|+++||+|||++
T Consensus 212 ~~~~~~~~~~~~~~~g~drll~gSD---~P~~~~~~~~~~~~~~-~~~~~~----~~~~----~~~~~i~~~NA~rl~~l 279 (288)
T 2ffi_A 212 LAFARQALCALEAHYGAERLMWGSD---WPHTQHESEVSFGSAV-EQFEAL----GCSA----QLRQALLLDTARALFGF 279 (288)
T ss_dssp HHHHHHHHHHHHHHTCGGGEEEECC---TTCTTCTTTCCHHHHH-HHHHHH----CCCH----HHHHHHHTHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCCCceEEecC---CCCCCCCCCCCHHHHH-HHHHHH----CCCH----HHHHHHHHHCHHHHhCc
Confidence 122357889999999999999999 6632110000011221 122222 2343 68999999999999999
Q ss_pred CCCc
Q 003372 381 NLGV 384 (825)
Q Consensus 381 ~~~~ 384 (825)
+.+.
T Consensus 280 ~~~~ 283 (288)
T 2ffi_A 280 ELEH 283 (288)
T ss_dssp CCC-
T ss_pred cccc
Confidence 8764
No 23
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=99.57 E-value=9.8e-15 Score=159.97 Aligned_cols=188 Identities=20% Similarity=0.248 Sum_probs=123.8
Q ss_pred HhhcccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhC-C-CCC----cCCchhhhhHHHHHHHHHHhhCCCcEEEe
Q 003372 160 RSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPV----RITNKSLIDYIFISSLEVAQFLDLPLQIH 233 (825)
Q Consensus 160 ~~~~~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~-~-~~~----~~~~~~l~d~~l~~l~e~~~e~glpvq~H 233 (825)
+.++++++||.+ +++. +++++.+++++++.. + .+. ...+..+.|..+.++|+.|+++|+||.+|
T Consensus 105 ~~~p~r~~~~~~---------l~~~-~~~~a~~el~~~~~~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH 174 (336)
T 2wm1_A 105 VSYPRRFVGLGT---------LPMQ-APELAVKEMERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVH 174 (336)
T ss_dssp HHSTTTEEEEEC---------CCTT-SHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEE
T ss_pred HhccCceeEEEe---------CCCc-CHHHHHHHHHHHHHccCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEEC
Confidence 346778888877 6554 567788999999864 2 222 12345578889999999999999999999
Q ss_pred eCCCCCCCCCC-CCCh---------------hchHHHHhhcCCCCcEEEEeCCC--CchHHHHH--------HHH-----
Q 003372 234 TGFGDKDLDLR-LSNP---------------LHLRAILEDKRFSKCRFVLLHAS--YPFSKEAS--------YLA----- 282 (825)
Q Consensus 234 ~G~gd~~~~~~-~~~P---------------~~L~~l~~~~~~P~l~ivl~H~g--~p~~~e~~--------~la----- 282 (825)
++....+..+. +..| +.+.++++ +||+++||+.|+| .|+..+.. .++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~--~~P~l~~v~~H~Gg~~p~~~~r~~~~~~~~~~~~~~~l~ 252 (336)
T 2wm1_A 175 PWDMQMDGRMAKYWLPWLVGMPAETTIAICSMIMGGVFE--KFPKLKVCFAHGGGAFPFTVGRISHGFSMRPDLCAQDNP 252 (336)
T ss_dssp CCSCCCSGGGSSTTHHHHTHHHHHHHHHHHHHHHTTHHH--HCTTCCEEESGGGTTHHHHHHHHHHHHHHCHHHHSSSCC
T ss_pred CCCCCccccccccchHHHhccHHHHHHHHHHHHHcCchh--hCCCCeEehhcccchHHHHHHHHHhhhhhChhhhhccCC
Confidence 98642111111 1111 23667888 8999999999997 56543221 221
Q ss_pred ----HhCCeeeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhcCCCCC
Q 003372 283 ----YVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLS 358 (825)
Q Consensus 283 ----~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~ 358 (825)
..+.|+|+|++ .+. ...++.+++..|.+||||||| ||... ......+.+ .+ -..++
T Consensus 253 ~~p~~~~~~~~~ds~-~~~-------~~~l~~~i~~~g~drilfGSD---~P~~~--~~~~~~~~l----~~---~~~l~ 312 (336)
T 2wm1_A 253 MNPKKYLGSFYTDAL-VHD-------PLSLKLLTDVIGKDKVILGTD---YPFPL--GELEPGKLI----ES---MEEFD 312 (336)
T ss_dssp SCGGGGTTSSEEECC-CCS-------HHHHHHHHHHHCTTSEECCCC---BTSTT--SCSSTTHHH----HT---CTTSC
T ss_pred CCHHHHHHhhEEEec-ccC-------HHHHHHHHHHhCCccEEEeCC---CCCCc--CCcCHHHHH----Hh---ccCCC
Confidence 22359999954 321 246788888999999999999 66321 110011111 11 03466
Q ss_pred hHHHHHHHHHHHHHhHHHHhcCCCC
Q 003372 359 VGEAIEVAKDIFALNAAQFYKINLG 383 (825)
Q Consensus 359 ~~~a~~~~~~Il~~NA~rly~L~~~ 383 (825)
. +.+++|+++||+|||+++..
T Consensus 313 ~----~~~~~i~~~NA~rl~~l~~~ 333 (336)
T 2wm1_A 313 E----ETKNKLKAGNALAFLGLERK 333 (336)
T ss_dssp H----HHHHHHHTHHHHHHHTCCC-
T ss_pred H----HHHHHHHHHHHHHHhCcCcc
Confidence 3 68999999999999998643
No 24
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=99.56 E-value=9.2e-15 Score=157.70 Aligned_cols=188 Identities=16% Similarity=0.196 Sum_probs=123.6
Q ss_pred HhhcccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhC-C-CCCcC----CchhhhhHHHHHHHHHHhhCCCcEEEe
Q 003372 160 RSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRS-G-KPVRI----TNKSLIDYIFISSLEVAQFLDLPLQIH 233 (825)
Q Consensus 160 ~~~~~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~-~-~~~~~----~~~~l~d~~l~~l~e~~~e~glpvq~H 233 (825)
+.+++++.||.. +++. +.+++.+++++++.. + .+..+ ....+.+..+.++++.|+++|+||++|
T Consensus 85 ~~~p~r~~~~~~---------~p~~-~~~~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH 154 (307)
T 2f6k_A 85 QQYPDQLGYLAS---------LPIP-YELDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALH 154 (307)
T ss_dssp HHCTTTEEEEEC---------CCTT-CHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEE
T ss_pred HhCccceeEEEe---------CCCC-CHHHHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEEC
Confidence 346777877776 4433 467788899999864 2 22111 123567788999999999999999999
Q ss_pred eCCCCCCC-CCCCCChh----------------chHHHHhhcCCCCcEEEEeCCCC--chHHHH----------HHHHHh
Q 003372 234 TGFGDKDL-DLRLSNPL----------------HLRAILEDKRFSKCRFVLLHASY--PFSKEA----------SYLAYV 284 (825)
Q Consensus 234 ~G~gd~~~-~~~~~~P~----------------~L~~l~~~~~~P~l~ivl~H~g~--p~~~e~----------~~la~~ 284 (825)
++....+. ......|. .+.++++ +||+++||+.|+|. |+..+. ..+...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~P~l~~v~~H~gg~~p~~~~~~~~~~~~~~~~~~~~~ 232 (307)
T 2f6k_A 155 PNEPAILPKNVDIDLPVPLLGFFMDTTMTFINMLKYHFFE--KYPNIKVIIPHAGAFLGIVDDRIAQYAQKVYQVDVYDV 232 (307)
T ss_dssp CCCCSCCCTTSSTTCCHHHHHHHHHHHHHHHHHHHTTHHH--HCTTCEEEESGGGTTHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred CCCCccccccccccccchhccchHHHHHHHHHHHhcCccc--cCCCCeEEccCCCccchhhHHHHHhhccccCcccHHHH
Confidence 98643210 01111121 2346888 89999999999974 544321 123445
Q ss_pred CCeeeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHH
Q 003372 285 YPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIE 364 (825)
Q Consensus 285 ~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~ 364 (825)
++|||+|+|++.. ...++.+++..|.+||||||| ||.. .....++.+. .+. +-..++. +
T Consensus 233 ~~n~y~~~s~~~~-------~~~l~~~~~~~g~drll~gSD---~P~~---~~~~~~~~~~-~l~---~~~~l~~----~ 291 (307)
T 2f6k_A 233 MHHVYFDVAGAVL-------PRQLPTLMSLAQPEHLLYGSD---IPYT---PLDGSRQLGH-ALA---TTDLLTN----E 291 (307)
T ss_dssp HHHSEEECCSSCT-------TTHHHHHTTTSCGGGEECCCC---TTTS---CHHHHHHHHH-HHH---HCTTSCH----H
T ss_pred HhheEEeccCCCC-------HHHHHHHHHhcCcccEEEecC---CCCC---CchhHHHHHH-HHh---hccCCCH----H
Confidence 5799999998753 135778888999999999999 6632 1111222221 111 1124664 5
Q ss_pred HHHHHHHHhHHHHhcC
Q 003372 365 VAKDIFALNAAQFYKI 380 (825)
Q Consensus 365 ~~~~Il~~NA~rly~L 380 (825)
.+++|+++||+|||++
T Consensus 292 ~~~~i~~~Na~rl~~~ 307 (307)
T 2f6k_A 292 QKQAIFYDNAHRLLTE 307 (307)
T ss_dssp HHHHHHTHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 7999999999999975
No 25
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=99.56 E-value=1.6e-14 Score=156.17 Aligned_cols=151 Identities=17% Similarity=0.158 Sum_probs=107.8
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchH--------------
Q 003372 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFS-------------- 275 (825)
Q Consensus 210 ~l~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~-------------- 275 (825)
.+.+..+.++++.|+++|+|+++|++. .++..+..+++ +||+++||+.|+|.|..
T Consensus 118 ~~~~~~~~~~~~~~~~~glpv~ih~~~---------~~l~~l~~ll~--~~P~l~iVi~H~G~p~~~~~~~~~~~~~~w~ 186 (303)
T 4do7_A 118 FVDDADFARGVAWLQANDYVYDVLVFE---------RQLPDVQAFCA--RHDAHWLVLDHAGKPALAEFDRDDTALARWR 186 (303)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEECCCG---------GGHHHHHHHHH--HCCSSCEEEGGGGCCCGGGCC---CHHHHHH
T ss_pred cccCHHHHHHHHHHHHCCCeEEEecCH---------HHHHHHHHHHH--HCCCCCEEEeCCCCCCccccccccchHHHHH
Confidence 477888999999999999999999873 23456788888 89999999999998752
Q ss_pred HHHHHHHHhCCeeeeccccccCccc---------HHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhh-HHHHHHHHH
Q 003372 276 KEASYLAYVYPQVYLDFGLAIPKLS---------VQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG-AKRAREVVF 345 (825)
Q Consensus 276 ~e~~~la~~~pNVyld~s~~~~~~~---------~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~-~~~~r~~l~ 345 (825)
..+..|+ .+||||+++|+++.... ...+...++.+++..|.+|+||||| ||...... -....+.+
T Consensus 187 ~~l~~la-~~~nv~~klSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD---~P~~~~~~~~~~~~~~~- 261 (303)
T 4do7_A 187 AALRELA-ALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSD---WPVCLLAASYDEVASLV- 261 (303)
T ss_dssp HHHHHHH-TSTTEEEEECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECCC---BTGGGGTCCHHHHHHHH-
T ss_pred HHHHHHH-hCCCEEEEeCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeCC---CCCCcCcCCHHHHHHHH-
Confidence 2344555 78999999998754321 1233457889999999999999999 77432111 11122222
Q ss_pred HHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCCCCc
Q 003372 346 SVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (825)
Q Consensus 346 ~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~~~~ 384 (825)
.+|+. ..++. +.+++|+++||+|+|+++.+.
T Consensus 262 ---~~~~~-~~l~~----~~~~~i~~~Na~rl~~l~~~~ 292 (303)
T 4do7_A 262 ---ERWAE-SRLSA----AERSALWGGTAARCYALPEPA 292 (303)
T ss_dssp ---HHHHH-HHCCH----HHHHHHTTHHHHHHTTCC---
T ss_pred ---HHHHh-cCCCH----HHHHHHHHHHHHHHhCCCCcc
Confidence 22111 12553 689999999999999998654
No 26
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=99.56 E-value=8.3e-15 Score=157.78 Aligned_cols=183 Identities=13% Similarity=0.105 Sum_probs=120.7
Q ss_pred hhcccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhCC-CCCcC-----CchhhhhHHHHHHHHHHhhCCCcEEEee
Q 003372 161 SAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVRI-----TNKSLIDYIFISSLEVAQFLDLPLQIHT 234 (825)
Q Consensus 161 ~~~~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~~-~~~~~-----~~~~l~d~~l~~l~e~~~e~glpvq~H~ 234 (825)
.++++++||.. ++|..+. ++++++.+.+ .+.++ ..+.+.+..+.++++.|+++|+||++|+
T Consensus 91 ~~p~r~~g~~~---------v~P~~~~----~eL~~l~~~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~ 157 (294)
T 4i6k_A 91 QYPDRLKGIAV---------VQHTTTF----NELVNLKAQGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVELHA 157 (294)
T ss_dssp HSTTTEEEEEC---------CCTTCCH----HHHHHHHTTTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEEEC
T ss_pred HCCCeEEEEEE---------eCCcccH----HHHHHHHHCCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEEee
Confidence 45667777765 4554333 3445544432 11111 1234567889999999999999999999
Q ss_pred CCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCc---------hHHHHHHHHHhCCeeeeccccccCccc----H
Q 003372 235 GFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP---------FSKEASYLAYVYPQVYLDFGLAIPKLS----V 301 (825)
Q Consensus 235 G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p---------~~~e~~~la~~~pNVyld~s~~~~~~~----~ 301 (825)
+.. .+..+.++++ +|| ++||+.|+|.| +.+++..++ .+||||+++|+.+.... .
T Consensus 158 ~~~---------~l~~~~~~l~--~~p-~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~-~~~nv~~k~Sg~~~~~~~~~~~ 224 (294)
T 4i6k_A 158 PPK---------YLVQLLPQLN--EYS-FDVVIDHFGRVDPVKGIEDPDYQKFLSLL-NVKQHWIKVSGFYRLGATPSNI 224 (294)
T ss_dssp CHH---------HHHHHHHHHT--TSS-SCEEESGGGCCCTTTCTTCHHHHHHHHHC-CTTTEEEECCCGGGSSSTTHHH
T ss_pred Ccc---------hHHHHHHHHH--HCC-CCEEEECCCCCCCCCCCCCHHHHHHHHHH-hCCCEEEEecccccccccCCCc
Confidence 731 2335677787 899 99999999876 455556665 57999999999764321 0
Q ss_pred HHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhh-HHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcC
Q 003372 302 QGMISSIKELLELAPTKKVMFSTDAYASPETYFLG-AKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKI 380 (825)
Q Consensus 302 ~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~-~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L 380 (825)
......++++++..|.+|+||||| ||...... ..+ .+.+ +.+.++ .++. +.+++|+++||+|||++
T Consensus 225 ~~~~~~l~~~~~~~g~dRll~gSD---~P~~~~~~~~~y-~~~~-~~l~~~----~~~~----~~~~~i~~~NA~rl~~l 291 (294)
T 4i6k_A 225 NIAQQAYNIFKEKGFLHKLIWGSD---WPHTQHESLITY-EDAI-KAFKQI----VFDK----HEQCLILNQNPTELFGF 291 (294)
T ss_dssp HHHHHHHHHHHHHTCGGGEECCCC---BTCTTCTTTCCH-HHHH-HHHHHH----CCCH----HHHHHHHTHHHHHHHTC
T ss_pred hhhHHHHHHHHHHhCcccEEEeCC---CCCCCCcCCCCH-HHHH-HHHHHH----CCCH----HHHHHHHHHCHHHHhCC
Confidence 122357889999999999999999 66432111 011 1222 223333 2553 68999999999999998
Q ss_pred CC
Q 003372 381 NL 382 (825)
Q Consensus 381 ~~ 382 (825)
+.
T Consensus 292 ~~ 293 (294)
T 4i6k_A 292 SR 293 (294)
T ss_dssp --
T ss_pred CC
Confidence 63
No 27
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=99.55 E-value=6.3e-15 Score=159.42 Aligned_cols=185 Identities=15% Similarity=0.143 Sum_probs=125.2
Q ss_pred HHhhcccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhCC-CCCcCC-----chhhhhHHHHHHHHHHhhCCCcEEE
Q 003372 159 LRSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVRIT-----NKSLIDYIFISSLEVAQFLDLPLQI 232 (825)
Q Consensus 159 l~~~~~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~~-~~~~~~-----~~~l~d~~l~~l~e~~~e~glpvq~ 232 (825)
++.++++++||.. ++|..+. ++++++...+ ++.++. ...+.+..+.++++.|++ ||++++
T Consensus 90 l~~~~~r~~Gva~---------vdp~~~~----~eL~~l~~~G~rGvR~~~~~~~~~~~~~~~~~~~~~~l~~-gl~v~l 155 (303)
T 4d9a_A 90 IARAQGKARGIAV---------VDPAIDE----AELAALHEGGMRGIRFNFLKRLVDDAPKDKFLEVAGRLPA-GWHVVI 155 (303)
T ss_dssp HHHTTTSEEEEEC---------CCTTCCH----HHHHHHHHTTEEEEEEECCTTTCSCCCHHHHHHHHTSCCT-TCEEEE
T ss_pred HHhCCCcEEEEEE---------eCCCCCH----HHHHHHHHCCCCEEEeecccCCccccCHHHHHHHHHHHhc-CCEEEE
Confidence 3456778888876 5555333 3444544432 222211 245778889999999999 999999
Q ss_pred eeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCc---------hHHHHHHHHHhCCeeeeccccccCcc----
Q 003372 233 HTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP---------FSKEASYLAYVYPQVYLDFGLAIPKL---- 299 (825)
Q Consensus 233 H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p---------~~~e~~~la~~~pNVyld~s~~~~~~---- 299 (825)
|++.. ++..+..+++ +| +++||+.|+|.| +++++..++..+||||+++|+++...
T Consensus 156 ~~~~~---------~l~~l~~~~~--~~-~~~iVidH~G~p~~~~g~~~~~~~~~~~l~~~~~NV~vKlSg~~~~~~~~~ 223 (303)
T 4d9a_A 156 YFEAD---------ILEELRPFMD--AI-PVPIVIDHMGRPDVRQGPDGADMKAFRRLLDSREDIWFKATCPDRLDPAGP 223 (303)
T ss_dssp ECCGG---------GHHHHHHHHH--HC-SSCEEEGGGGCCCGGGCTTSHHHHHHHHHHHHCTTEEEECCCHHHHCTTCT
T ss_pred ecccc---------cHHHHHHHHH--HC-CCcEEEeCCCCCCcccCCCCHHHHHHHHHHhhCCCEEEEeeCceecCCCCC
Confidence 99742 3446778888 89 899999999864 56778888999999999999864211
Q ss_pred cHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhH-HHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHh
Q 003372 300 SVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGA-KRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (825)
Q Consensus 300 ~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~-~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly 378 (825)
........++.+++.+ .+|+||||| ||....... ..+...+. .+.++ ++ + ++.+++|+++||+|+|
T Consensus 224 ~~~~~~~~~~~~~~~~-~dRlmfGSD---wP~~~~~~~~~~~~~~~~-~~~~~-----~~-~--~~~~~~il~~NA~rly 290 (303)
T 4d9a_A 224 PWDDFARSVAPLVADY-ADRVIWGTA---WPHPNMQDAIPDDGLVVD-MIPRI-----AP-T--PELQHKMLVTNPMRLY 290 (303)
T ss_dssp TCHHHHHHHHHHHHHT-TTSEECCCC---TTCTTCTTSCCCHHHHHH-THHHH-----SC-S--HHHHHHHHTHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC-cccEEEecC---CCCcccccCCCCHHHHHH-HHHHH-----CC-C--HHHHHHHHHHHHHHHh
Confidence 1123456788899988 799999999 775432110 01112221 11221 32 1 2689999999999999
Q ss_pred cCCC
Q 003372 379 KINL 382 (825)
Q Consensus 379 ~L~~ 382 (825)
+++.
T Consensus 291 ~~~~ 294 (303)
T 4d9a_A 291 WSEE 294 (303)
T ss_dssp CGGG
T ss_pred CCCc
Confidence 9864
No 28
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=99.55 E-value=2.4e-14 Score=156.83 Aligned_cols=185 Identities=18% Similarity=0.267 Sum_probs=122.2
Q ss_pred HhhcccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhCC-CCC----cCCchhhhhHHHHHHHHHHhhCCCcEEEee
Q 003372 160 RSAANKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPV----RITNKSLIDYIFISSLEVAQFLDLPLQIHT 234 (825)
Q Consensus 160 ~~~~~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~~-~~~----~~~~~~l~d~~l~~l~e~~~e~glpvq~H~ 234 (825)
+.++++++||.+ +++. +++++.+++++++..+ .+. ...+..++|..+.|+|+.|+++|+||.+|+
T Consensus 109 ~~~p~r~~~~~~---------l~~~-~~~~a~~el~~~~~~g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~ 178 (334)
T 2hbv_A 109 AHNPQRIKVLAQ---------VPLQ-DLDLACKEASRAVAAGHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHP 178 (334)
T ss_dssp TTCTTTEEECBC---------CCTT-SHHHHHHHHHHHHHHTCCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhCCCeEEEEEe---------cCcc-CHHHHHHHHHHHHHcCCeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECC
Confidence 346778888876 6554 5667888889988533 221 223456788999999999999999999999
Q ss_pred CCCCCCCCCC-CC------Ch---------hchHHHHhhcCCCC-cEEEEeCCC--CchHHHHHH-------H-------
Q 003372 235 GFGDKDLDLR-LS------NP---------LHLRAILEDKRFSK-CRFVLLHAS--YPFSKEASY-------L------- 281 (825)
Q Consensus 235 G~gd~~~~~~-~~------~P---------~~L~~l~~~~~~P~-l~ivl~H~g--~p~~~e~~~-------l------- 281 (825)
+....+..+. +. .| +.+.++++ +||+ ++||+.|+| .|+..+... +
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~v~~--~~P~~l~~v~~H~Gg~~p~~~~r~~~~~~~~~~~~~~~~~ 256 (334)
T 2hbv_A 179 WDMMGGQRMKKWMLPWLVAMPAETQLAILSLILSGAFE--RIPKSLKICFGHGGGSFAFLLGRVDNAWRHRDIVREDCPR 256 (334)
T ss_dssp CSCSCTTTTCSTTHHHHTHHHHHHHHHHHHHHHTTGGG--TSCTTCCEEESGGGTTHHHHHHHHHHHHHHCHHHHTTCCS
T ss_pred CCCCCCcchhhhhhhhhhhcHHHHHHHHHHHHHcCchh--hCCCcceEEeecccchHHHHHHHHHhhhhcccccccccCC
Confidence 8642211111 11 11 23667778 8999 999999997 455432211 1
Q ss_pred --HHhCCeeeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhcCCCCCh
Q 003372 282 --AYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSV 359 (825)
Q Consensus 282 --a~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~ 359 (825)
...++|+|+|++ .+. ...++.+++..|.+||||||| ||... ...... +. ++...++.
T Consensus 257 ~~~~~~~~~y~ds~-~~~-------~~~l~~~~~~~g~drilfGSD---~P~~~--~~~~~~----~~----l~~~~l~~ 315 (334)
T 2hbv_A 257 PPSEYVDRFFVDSA-VFN-------PGALELLVSVMGEDRVMLGSD---YPFPL--GEQKIG----GL----VLSSNLGE 315 (334)
T ss_dssp CGGGGGGGCEEECC-CSS-------HHHHHHHHHHHCGGGEECCCC---BTSTT--SCSSTT----HH----HHTSSCCH
T ss_pred CHHHHHhhhEEEec-cCC-------HHHHHHHHHHhCcccEEEeCC---CCCCC--CCcCHh----hH----hhhcCCCH
Confidence 112359999954 331 246788888899999999999 66321 110001 11 12235664
Q ss_pred HHHHHHHHHHHHHhHHHHhcCC
Q 003372 360 GEAIEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 360 ~~a~~~~~~Il~~NA~rly~L~ 381 (825)
+.+++|+++||+|||+++
T Consensus 316 ----~~~~~i~~~NA~rl~~l~ 333 (334)
T 2hbv_A 316 ----SAKDKIISGNASKFFNIN 333 (334)
T ss_dssp ----HHHHHHHTHHHHHHHTCC
T ss_pred ----HHHHHHHhHHHHHHhCCC
Confidence 689999999999999985
No 29
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=99.49 E-value=5.4e-14 Score=155.14 Aligned_cols=191 Identities=17% Similarity=0.241 Sum_probs=120.5
Q ss_pred HhhcccccceeeeeecccCCCCCCC--CCHHHHHHHHHHHHhC-C-CCCcC---------CchhhhhHHHHHHHHHHhhC
Q 003372 160 RSAANKIVGLKSIAAYRSGLEINPH--VTKKDAEEGLAEDLRS-G-KPVRI---------TNKSLIDYIFISSLEVAQFL 226 (825)
Q Consensus 160 ~~~~~~~vgfks~~ay~~Gl~~~~~--~~~~ea~~~~~r~l~~-~-~~~~~---------~~~~l~d~~l~~l~e~~~e~ 226 (825)
+.++++++||.. +++. .+.+++.+++++++.. + .+..+ ....+.|..+.++|+.|+++
T Consensus 101 ~~~p~rf~~~~~---------~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~ 171 (350)
T 2gwg_A 101 QLFPDNFIGAAM---------LPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVEL 171 (350)
T ss_dssp HHSTTTEEEEEE---------CCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHH
T ss_pred HhCCCcEEEEEe---------CCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHc
Confidence 356788888887 4332 1346677888998853 2 11111 12458888999999999999
Q ss_pred CCcEEEeeCCCCC-C---CCCCCCCh-------hchHHHHhhcCCCCcEEEEeCCC--CchHHHH----HH-H------H
Q 003372 227 DLPLQIHTGFGDK-D---LDLRLSNP-------LHLRAILEDKRFSKCRFVLLHAS--YPFSKEA----SY-L------A 282 (825)
Q Consensus 227 glpvq~H~G~gd~-~---~~~~~~~P-------~~L~~l~~~~~~P~l~ivl~H~g--~p~~~e~----~~-l------a 282 (825)
|+||.+|++.+.. . ....+..+ +.+.++++ +||+++||+.|+| .|+.... +. + .
T Consensus 172 ~lpv~iH~~~~~~~~~~~~~~~~~~~~~~a~~~li~~~v~~--~~P~l~~vi~H~Gg~~p~~~~r~~~~~~~~~~~~l~~ 249 (350)
T 2gwg_A 172 EIPAMIHVSTSCNTCFHTTGAHYLNADTTAFMQCVAGDLFK--DFPELKFVIPHGGGAVPYHWGRFRGLAQEMKKPLLED 249 (350)
T ss_dssp TCCEEECCCC---------TTHHHHHHHHHHHHHHHSCHHH--HCTTCCEEESGGGTTTGGGHHHHHHHHHHTTCCCHHH
T ss_pred CCeEEECCCCCCcccccccccccchHHHHHHHHHHhcCccc--cCCCCcEEeccCCCcchhhHHHHHHHHHhccCCCcHH
Confidence 9999999986421 0 00111111 12346788 8999999999996 5665321 11 1 3
Q ss_pred HhCCeeeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhh---hh-HHHHHHHHHHHHHhhhcCCCCC
Q 003372 283 YVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF---LG-AKRAREVVFSVLRDTCIDEDLS 358 (825)
Q Consensus 283 ~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~---~~-~~~~r~~l~~~l~~~v~~g~l~ 358 (825)
..++|||+|+|++. . ..++.+++..|.+||||||| ||...- +. ..++... .+.+.+ -..++
T Consensus 250 ~~~~n~y~d~s~~~----~----~~l~~l~~~~g~dril~gSD---~P~~~~~~~p~~~~~~~~~-~~~l~~---~~~l~ 314 (350)
T 2gwg_A 250 HVLNNIFFDTCVYH----Q----PGIDLLNTVIPVDNVLFASE---MIGAVRGIDPRTGFYYDDT-KRYIEA---STILT 314 (350)
T ss_dssp HTTTTEEEECCCCS----H----HHHHHHHHHSCGGGEECCCC---CSSSCCCEETTTTEETTCT-HHHHHH---CSSSC
T ss_pred HHhhcEEEEecccC----c----HHHHHHHHHhCcccEEEecC---CCCCcccCCcccccchhhH-HHHHHh---ccCCC
Confidence 46699999999732 1 35788899999999999999 552100 00 0000110 011111 12466
Q ss_pred hHHHHHHHHHHHHHhHHHHhcC
Q 003372 359 VGEAIEVAKDIFALNAAQFYKI 380 (825)
Q Consensus 359 ~~~a~~~~~~Il~~NA~rly~L 380 (825)
. +.+++|+++||+|||++
T Consensus 315 ~----~~~~~i~~~NA~rl~~~ 332 (350)
T 2gwg_A 315 P----EEKQQIYEGNARRVYPR 332 (350)
T ss_dssp H----HHHHHHHTHHHHHHCHH
T ss_pred H----HHHHHHHHHHHHHHHHh
Confidence 4 68999999999999976
No 30
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=99.46 E-value=2e-13 Score=153.85 Aligned_cols=190 Identities=17% Similarity=0.160 Sum_probs=120.5
Q ss_pred HHHHH-hhc-ccccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhCC-CCCcC---------CchhhhhHHHHHHHHHH
Q 003372 156 LKQLR-SAA-NKIVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSG-KPVRI---------TNKSLIDYIFISSLEVA 223 (825)
Q Consensus 156 ~~~l~-~~~-~~~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~~-~~~~~---------~~~~l~d~~l~~l~e~~ 223 (825)
.+.++ .++ ++++||.. +++. +++.+.++++|++..| ++..+ ....++|..+.|+|+.|
T Consensus 151 ae~~~~~~P~~Rf~g~a~---------v~~~-d~~~a~~EL~r~~~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~ 220 (423)
T 4dzi_A 151 DEDWGFDRPDHRIIAAPI---------VSLA-DPTRAVEEVDFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARL 220 (423)
T ss_dssp HHHTCSSCTTCCEEECCB---------CCCS-SHHHHHHHHHHHHHTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHH
T ss_pred HHHHHhhCCCCcEEEEEe---------CCcc-CHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHH
Confidence 33444 467 88999988 6544 6888999999999754 22222 24668899999999999
Q ss_pred hhCCCcEEEeeCCCCCC----------CCCCCC--Chh-----------------chHHHHhhcCCCCcEEEEeCCCCch
Q 003372 224 QFLDLPLQIHTGFGDKD----------LDLRLS--NPL-----------------HLRAILEDKRFSKCRFVLLHASYPF 274 (825)
Q Consensus 224 ~e~glpvq~H~G~gd~~----------~~~~~~--~P~-----------------~L~~l~~~~~~P~l~ivl~H~g~p~ 274 (825)
+++|+||++|+|.+... ....+. .|+ .+.++++ |||++|||+.|+|..|
T Consensus 221 ~elg~pV~iH~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~Li~sGvf~--RfP~Lkiil~h~Gg~w 298 (423)
T 4dzi_A 221 AEAGVPVGFHLSDSGYLHIAAAWGGKSTFEGFGAKDPLDQVLLDDRAIHDTMASMIVHGVFT--RHPKLKAVSIENGSYF 298 (423)
T ss_dssp HHHTCCEEEECCCCSTHHHHHHTTCC-------CCCHHHHHHHTTHHHHHHHHHHHHTTHHH--HCTTCCEEEESSCSTH
T ss_pred HhcCCeEEEeCCCCCccccccccccccccccccccchhHHHhccchHHHHHHHHHHHcCchh--hCCCCeEEEeCCCcch
Confidence 99999999999864211 001111 121 2346677 9999999999998654
Q ss_pred H---HHHHH-HHHhC-------------CeeeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhH
Q 003372 275 S---KEASY-LAYVY-------------PQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGA 337 (825)
Q Consensus 275 ~---~e~~~-la~~~-------------pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~ 337 (825)
. .+... ..... .|+|+++ +. ...+..+++..|.+||||||| ||.. ...
T Consensus 299 lP~~l~Rld~~~~~~~~~~~~~Pse~~r~n~y~t~---~~-------~~~l~~~~~~~G~drilfgSD---yP~~--~~~ 363 (423)
T 4dzi_A 299 VHRLIKRLKKAANTQPQYFPEDPVEQLRNNVWIAP---YY-------EDDLPELARVIGVDKILFGSD---WPHG--EGL 363 (423)
T ss_dssp HHHHHHHHHHHHHHCGGGCSSCHHHHHHHHEEECC---CT-------TSCHHHHHHHHCGGGBCCCCC---BTST--TSC
T ss_pred HHHHHHHHHHHHHhCccccCCCHHHHHhhCeEEee---cC-------hHHHHHHHHHcCcceEEEecC---CCCc--cCc
Confidence 3 22111 11111 2788863 11 124567788899999999999 7732 111
Q ss_pred HHHHHHHHHHHHhhhcC-CCCChHHHHHHHHHHHHHhHHHHhcCCCCc
Q 003372 338 KRAREVVFSVLRDTCID-EDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (825)
Q Consensus 338 ~~~r~~l~~~l~~~v~~-g~l~~~~a~~~~~~Il~~NA~rly~L~~~~ 384 (825)
... .++++. ..++. +.+++|+++||+|||+|+...
T Consensus 364 ~~~--------~~~~~~l~~l~~----~~~~~I~~~NA~rl~~l~~~~ 399 (423)
T 4dzi_A 364 ASP--------VSFTAELKGFSE----SDIRKIMRDNALDLLGVQVGS 399 (423)
T ss_dssp SSG--------GGGGGGCTTSCH----HHHHHHHTHHHHHHHC-----
T ss_pred cCH--------HHHHHHhcCCCH----HHHHHHHHHHHHHHHCCCccc
Confidence 000 122222 24664 689999999999999997543
No 31
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=99.22 E-value=3.2e-11 Score=127.00 Aligned_cols=147 Identities=18% Similarity=0.189 Sum_probs=96.0
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCC--CcEEEEeCCCCchHHHHHHHHHhCC
Q 003372 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYP 286 (825)
Q Consensus 209 ~~l~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P--~l~ivl~H~g~p~~~e~~~la~~~p 286 (825)
..+.+..+.+++++|+++|+||.+|++.. +..+..+++ ++| ++++|+ |++.....++..++ .++
T Consensus 104 ~~~~~~~~~~~~~~a~~~~~pv~iH~~~~----------~~~~~~~l~--~~p~~~~~~i~-H~~~g~~~~~~~~l-~~~ 169 (265)
T 2gzx_A 104 ADVQKEVFRKQIALAKRLKLPIIIHNREA----------TQDCIDILL--EEHAEEVGGIM-HSFSGSPEIADIVT-NKL 169 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--HTTGGGTCEEE-TTCCSCHHHHHHHH-HTS
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeccc----------HHHHHHHHH--hcCCCCCcEEE-EcCCCCHHHHHHHH-HHC
Confidence 45677789999999999999999999742 234667888 799 899985 55333344454555 368
Q ss_pred eeeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhh----hHHHHHHHHHHHHHhhhcCCCCChHHH
Q 003372 287 QVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFL----GAKRAREVVFSVLRDTCIDEDLSVGEA 362 (825)
Q Consensus 287 NVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~----~~~~~r~~l~~~l~~~v~~g~l~~~~a 362 (825)
|||+++|++..... ...++++++..|.+|||||||++......+. ...+....+. .+.++ ..++.
T Consensus 170 ~~y~~~sg~~~~~~----~~~~~~~i~~~~~dril~gSD~P~~~~~~~~g~~~~~~~~~~~~~-~l~~~---~~~~~--- 238 (265)
T 2gzx_A 170 NFYISLGGPVTFKN----AKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVAE-QIAEL---KGLSY--- 238 (265)
T ss_dssp CCEEEECGGGGCSS----CCHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHHH-HHHHH---TTCCH---
T ss_pred CceEEecceeecCC----cHHHHHHHHhCChhhEEEccCCCCCCCcccCCCCCChHHHHHHHH-HHHHH---hCCCH---
Confidence 99999998754321 1257788899999999999994321100000 0011222221 11111 24664
Q ss_pred HHHHHHHHHHhHHHHhcCC
Q 003372 363 IEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 363 ~~~~~~Il~~NA~rly~L~ 381 (825)
+.+++|+++||+|+|++.
T Consensus 239 -~~~~~i~~~Na~rl~~~~ 256 (265)
T 2gzx_A 239 -EEVCEQTTKNAEKLFNLN 256 (265)
T ss_dssp -HHHHHHHHHHHHHHHC--
T ss_pred -HHHHHHHHHHHHHHhCCc
Confidence 579999999999999986
No 32
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=99.18 E-value=4.2e-11 Score=126.93 Aligned_cols=146 Identities=20% Similarity=0.181 Sum_probs=98.6
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCC--CcEEEEeCCCCchHHHHHHHHHhCC
Q 003372 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYP 286 (825)
Q Consensus 209 ~~l~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P--~l~ivl~H~g~p~~~e~~~la~~~p 286 (825)
..+.+..|.+.+++|+++|+||.+|++. .+..+.++++ ++| ++++|+ |+...+...+..++. .
T Consensus 115 ~~~q~~~f~~~~~~a~~~~lPv~iH~~~----------~~~~~~~il~--~~p~~~~~~I~-H~~~g~~~~~~~~~~--~ 179 (268)
T 1j6o_A 115 AEVQKRVFVEQIELAGKLNLPLVVHIRD----------AYSEAYEILR--TESLPEKRGVI-HAFSSDYEWAKKFID--L 179 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEES----------CHHHHHHHHH--HSCCCSSCEEE-TTCCSCHHHHHHHHH--H
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEeCc----------hHHHHHHHHH--hcCCCCCCEEE-EcCCCCHHHHHHHHH--C
Confidence 4566778999999999999999999973 2334566777 788 999999 985455554555554 3
Q ss_pred eeeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhh----HHHHHHHHHHHHHhhhcCCCCChHHH
Q 003372 287 QVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG----AKRAREVVFSVLRDTCIDEDLSVGEA 362 (825)
Q Consensus 287 NVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~----~~~~r~~l~~~l~~~v~~g~l~~~~a 362 (825)
|+|+++|+++.... ...++++++..|.+||||+||++..+...+.+ ..++...+.. +.+. ..++.
T Consensus 180 g~y~~~sg~~~~~~----~~~l~~~i~~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~~~-la~~---~~~~~--- 248 (268)
T 1j6o_A 180 GFLLGIGGPVTYPK----NEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVET-ISQV---LGVPE--- 248 (268)
T ss_dssp TEEEEECGGGGCTT----CHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHHH-HHHH---HTSCH---
T ss_pred CCeEEecccccccc----hHHHHHHHHhCChhhEEEecCCCCCCCcccCCCCCchHHHHHHHHH-HHHH---hCcCH---
Confidence 99999998764321 13577888899999999999943221100000 0112222211 1110 24664
Q ss_pred HHHHHHHHHHhHHHHhcCC
Q 003372 363 IEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 363 ~~~~~~Il~~NA~rly~L~ 381 (825)
+.+++|+++||+|+|++.
T Consensus 249 -e~~~~i~~~Na~rlf~l~ 266 (268)
T 1j6o_A 249 -AKVDEATTENARRIFLEV 266 (268)
T ss_dssp -HHHHHHHHHHHHHHHHSC
T ss_pred -HHHHHHHHHHHHHHhCcc
Confidence 578999999999999985
No 33
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=99.01 E-value=5.7e-10 Score=117.42 Aligned_cols=147 Identities=20% Similarity=0.249 Sum_probs=97.0
Q ss_pred hhhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCee
Q 003372 209 KSLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (825)
Q Consensus 209 ~~l~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNV 288 (825)
..+.+..+.+.+++|+++|+||.+|++.. +..+.++++..++|++++|+ |+...+..++..++. .|+
T Consensus 106 ~~~q~~~~~~~~~~a~~~~~pv~iH~~~~----------~~~~~~~l~~~~~p~~~~v~-H~~~~~~~~~~~~~~--~g~ 172 (265)
T 1yix_A 106 KVRQQESFIHHIQIGRELNKPVIVHTRDA----------RADTLAILREEKVTDCGGVL-HCFTEDRETAGKLLD--LGF 172 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHHHTTGGGTCEEE-TTCCSCHHHHHHHHT--TTC
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEecCc----------hHHHHHHHHhcCCCCCCEEE-EcCCCCHHHHHHHHH--CCc
Confidence 45667788999999999999999999732 33455667633469999987 986555555555554 399
Q ss_pred eeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCC-cch-----hhhhHHHHHHHHHHHHHhhhcCCCCChHHH
Q 003372 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PET-----YFLGAKRAREVVFSVLRDTCIDEDLSVGEA 362 (825)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-P~~-----~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a 362 (825)
|+++++++.... ...++++++..|.+|+|||||++.. |.. ..+ ..+...+.. +.+. ..++.
T Consensus 173 ~~~~sg~~~~~~----~~~~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~--~~l~~~~~~-l~~~---~~~~~--- 239 (265)
T 1yix_A 173 YISFSGIVTFRN----AEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQP--AMVRDVAEY-MAVL---KGVAV--- 239 (265)
T ss_dssp EEEECGGGGSTT----CHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCG--GGHHHHHHH-HHHH---HTSCH---
T ss_pred EEEECCccccCc----hHHHHHHHHhCChHHEEEecCCCCCCCcccCCCCCch--HHHHHHHHH-HHHH---hCcCH---
Confidence 999998654321 1356788888999999999994321 100 000 012222211 1111 14664
Q ss_pred HHHHHHHHHHhHHHHhcCCC
Q 003372 363 IEVAKDIFALNAAQFYKINL 382 (825)
Q Consensus 363 ~~~~~~Il~~NA~rly~L~~ 382 (825)
+.+++|+++||+|+|+++.
T Consensus 240 -~~~~~i~~~Na~rl~~l~~ 258 (265)
T 1yix_A 240 -EELAQVTTDNFARLFHIDA 258 (265)
T ss_dssp -HHHHHHHHHHHHHHTTCCG
T ss_pred -HHHHHHHHHHHHHHhCcCh
Confidence 5789999999999999864
No 34
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.79 E-value=1.1e-08 Score=107.41 Aligned_cols=145 Identities=18% Similarity=0.200 Sum_probs=89.7
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCC-CcEEEEeCCCCchHHHHHHHHHhCCee
Q 003372 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS-KCRFVLLHASYPFSKEASYLAYVYPQV 288 (825)
Q Consensus 210 ~l~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P-~l~ivl~H~g~p~~~e~~~la~~~pNV 288 (825)
...+..+.+.+++|.++|+||.+|++.. ...+.++++ ++| ++++|+ |+-......+..+.. .|+
T Consensus 110 ~~q~~~f~~~~~~a~~~~~Pv~iH~~~a----------~~~~~~il~--~~~~~~~~i~-H~~~g~~~~~~~~~~--~g~ 174 (259)
T 1zzm_A 110 ERQQWLLDEQLKLAKRYDLPVILHSRRT----------HDKLAMHLK--RHDLPRTGVV-HGFSGSLQQAERFVQ--LGY 174 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEESC----------HHHHHHHHH--HHCCTTCEEE-TTCCSCHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeccc----------HHHHHHHHH--hcCCCCCEEE-EcCCCCHHHHHHHHH--CCC
Confidence 3445578889999999999999999742 123555666 443 466776 972222233333433 599
Q ss_pred eeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhh----HHHHHHHHHHHHHhhhcCCCCChHHHHH
Q 003372 289 YLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLG----AKRAREVVFSVLRDTCIDEDLSVGEAIE 364 (825)
Q Consensus 289 yld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~----~~~~r~~l~~~l~~~v~~g~l~~~~a~~ 364 (825)
|++++++..+.. ...++++++..|.+|||++||++..+...+.+ ..+....+. ...+...++. +
T Consensus 175 ~i~~~g~~~~~~----~~~~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~----~la~~~g~~~----e 242 (259)
T 1zzm_A 175 KIGVGGTITYPR----ASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFA----VLCELRREPA----D 242 (259)
T ss_dssp EEEECGGGGCTT----TCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHH----HHHHHCSSCH----H
T ss_pred EEEECceeeccc----cHHHHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHH----HHHHHHCcCH----H
Confidence 999998754210 12467778889999999999954321100000 011222222 1112235675 5
Q ss_pred HHHHHHHHhHHHHhcCC
Q 003372 365 VAKDIFALNAAQFYKIN 381 (825)
Q Consensus 365 ~~~~Il~~NA~rly~L~ 381 (825)
.+.+++++||+|+|+++
T Consensus 243 ~~~~~~~~Na~rl~~l~ 259 (259)
T 1zzm_A 243 EIAQALLNNTYTLFNVP 259 (259)
T ss_dssp HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhCcC
Confidence 78899999999999874
No 35
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.76 E-value=1.3e-08 Score=107.04 Aligned_cols=145 Identities=17% Similarity=0.164 Sum_probs=91.0
Q ss_pred hhhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCC--CcEEEEeCCCCchHHHHHHHHHhCCe
Q 003372 210 SLIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS--KCRFVLLHASYPFSKEASYLAYVYPQ 287 (825)
Q Consensus 210 ~l~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P--~l~ivl~H~g~p~~~e~~~la~~~pN 287 (825)
...+..+.+.+++|.++|+||.+|++.. ...+.++++ ++| ..++|+ |+.......+..++. .|
T Consensus 108 ~~q~~~f~~~l~~a~~~~lpv~iH~~~a----------~~~~~~il~--~~~~~~~~~v~-H~~~g~~~~~~~~~~--~g 172 (264)
T 1xwy_A 108 EEQERAFVAQLRIAADLNMPVFMHCRDA----------HERFMTLLE--PWLDKLPGAVL-HCFTGTREEMQACVA--HG 172 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHG--GGGGGSSCEEE-CSCCCCHHHHHHHHH--TT
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCc----------hHHHHHHHH--hcCCCCCcEEE-EccCCCHHHHHHHHH--CC
Confidence 3445578888999999999999999731 123445666 565 688877 983222333444443 39
Q ss_pred eeeccccccC-cccHHHHHHHHHHHHHHCCCCcEEEecCCCCC-cc---hhhhh----HHHHHHHHHHHHHhhhcCCCCC
Q 003372 288 VYLDFGLAIP-KLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PE---TYFLG----AKRAREVVFSVLRDTCIDEDLS 358 (825)
Q Consensus 288 Vyld~s~~~~-~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-P~---~~~~~----~~~~r~~l~~~l~~~v~~g~l~ 358 (825)
+|+++++++. +-. ...++++++..|.+||||+||++.. |. ..+.+ ..++.+.+..+ . +...++
T Consensus 173 ~yi~~~g~~~~~~~----~~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~~~-a---~~~g~~ 244 (264)
T 1xwy_A 173 IYIGITGWVCDERR----GLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRI-A---HWRGED 244 (264)
T ss_dssp CEEEECGGGGCTTT----SHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHHH-H---HHHTCC
T ss_pred eEEEECccccCCcC----cHHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHHHHH-H---HHHCcC
Confidence 9999998754 211 1357788899999999999995431 21 00000 01122222211 1 112466
Q ss_pred hHHHHHHHHHHHHHhHHHHhcCC
Q 003372 359 VGEAIEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 359 ~~~a~~~~~~Il~~NA~rly~L~ 381 (825)
. +.+.+++++||+|+|+++
T Consensus 245 ~----e~~~~~~~~Na~rl~~l~ 263 (264)
T 1xwy_A 245 A----AWLAATTDANVKTLFGIA 263 (264)
T ss_dssp H----HHHHHHHHHHHHHHHCCC
T ss_pred H----HHHHHHHHHHHHHHhCcc
Confidence 5 578899999999999975
No 36
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.64 E-value=3.3e-07 Score=96.84 Aligned_cols=142 Identities=16% Similarity=0.145 Sum_probs=90.0
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeee
Q 003372 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (825)
Q Consensus 211 l~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyl 290 (825)
..+..|.+.+++|.++|+||.+|++.. ...+-++++ ++|..++|+ |+-......+..+.. .|+|+
T Consensus 123 ~q~~~f~~~~~la~~~~lPv~iH~~~a----------~~~~~~il~--~~~~~~~v~-H~~~g~~~~~~~~~~--~g~~i 187 (272)
T 2y1h_A 123 EQRQVLIRQIQLAKRLNLPVNVHSRSA----------GRPTINLLQ--EQGAEKVLL-HAFDGRPSVAMEGVR--AGYFF 187 (272)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECTTC----------HHHHHHHHH--HTTCCSEEE-ETCCSCHHHHHHHHH--TTCEE
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEeCCc----------HHHHHHHHH--hCCCCCEEE-EccCCCHHHHHHHHH--CCCEE
Confidence 344578888999999999999999732 112446777 688888888 872112233333333 48999
Q ss_pred ccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhh--hhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHH
Q 003372 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF--LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKD 368 (825)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~--~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~ 368 (825)
+++++... . ..++++++..|.+|+|++||++..+.... ....+....+. .+.+. ..++. +.+.+
T Consensus 188 ~~~g~~~~-~-----~~~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~~-~la~~---~g~~~----e~~~~ 253 (272)
T 2y1h_A 188 SIPPSIIR-S-----GQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISAE-YIAQV---KGISV----EEVIE 253 (272)
T ss_dssp EECGGGGT-C-----HHHHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHHH-HHHHH---HTSCH----HHHHH
T ss_pred EECCcccC-c-----HHHHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHHH-HHHHH---HCcCH----HHHHH
Confidence 99987632 1 25778888999999999999543210000 00011222221 11111 14664 57889
Q ss_pred HHHHhHHHHhcCC
Q 003372 369 IFALNAAQFYKIN 381 (825)
Q Consensus 369 Il~~NA~rly~L~ 381 (825)
++++||+|+|++.
T Consensus 254 ~~~~N~~~l~~~~ 266 (272)
T 2y1h_A 254 VTTQNALKLFPKL 266 (272)
T ss_dssp HHHHHHHHHSTTH
T ss_pred HHHHHHHHHHHhH
Confidence 9999999999874
No 37
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=98.31 E-value=4.3e-06 Score=89.86 Aligned_cols=141 Identities=16% Similarity=0.158 Sum_probs=84.1
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCC-C-cEEEEeCCCCchHHHHHHHHHhCCeee
Q 003372 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFS-K-CRFVLLHASYPFSKEASYLAYVYPQVY 289 (825)
Q Consensus 212 ~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P-~-l~ivl~H~g~p~~~e~~~la~~~pNVy 289 (825)
....|.+.+++|.++|+||.+|++.. ...+-++++ ++| + .++ +.|+-.....++..+.. .|+|
T Consensus 125 Q~~~f~~ql~lA~~~~lPv~iH~r~a----------~~~~~~il~--~~~~~~~~~-i~H~f~g~~~~~~~~l~--~g~y 189 (301)
T 2xio_A 125 QLKYFEKQFELSEQTKLPMFLHCRNS----------HAEFLDITK--RNRDRCVGG-VVHSFDGTKEAAAALID--LDLY 189 (301)
T ss_dssp HHHHHHHTHHHHHHHCCCEEEEEESC----------HHHHHHHHH--HTGGGSSCE-EETTCCCCHHHHHHHHH--TTCE
T ss_pred HHHHHHHHHHHHHHhCCcEEEEecCc----------hHHHHHHHH--hccCCCCcE-EEEccCCCHHHHHHHHh--cCcE
Confidence 34567888999999999999999731 223445666 454 2 344 48982112223333332 3899
Q ss_pred eccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCC----------------cch-hhh-------h--HHHHHHH
Q 003372 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS----------------PET-YFL-------G--AKRAREV 343 (825)
Q Consensus 290 ld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~----------------P~~-~~~-------~--~~~~r~~ 343 (825)
+++++.. .- . . ...++++..|.+|||++||++.. |.- -+. + ..+...+
T Consensus 190 i~~~g~~-~~-~-~---~~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~~~~~n~p~~v~~~ 263 (301)
T 2xio_A 190 IGFNGCS-LK-T-E---ANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQI 263 (301)
T ss_dssp EEECGGG-SS-S-H---HHHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSEETTCCCGGGHHHH
T ss_pred EEEcccc-cC-C-h---HHHHHHHhCChHHEEEecCCCcccccccccccccccccCcccccccccccCCCCCChHHHHHH
Confidence 9999862 11 1 1 12477888999999999996532 110 000 0 0011222
Q ss_pred HHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCC
Q 003372 344 VFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 344 l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~ 381 (825)
+ +.+.+. ..++. +.+.+++++||+|+|++.
T Consensus 264 ~-~~ia~l---~g~~~----e~~~~~~~~Na~rlf~~~ 293 (301)
T 2xio_A 264 L-EIMSAV---RDEDP----LELANTLYNNTIKVFFPV 293 (301)
T ss_dssp H-HHHHHH---HTCCH----HHHHHHHHHHHHHHHCCC
T ss_pred H-HHHHHH---HCcCH----HHHHHHHHHHHHHHhCch
Confidence 2 122221 14665 578999999999999975
No 38
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=98.28 E-value=5.4e-06 Score=87.89 Aligned_cols=146 Identities=16% Similarity=0.173 Sum_probs=85.7
Q ss_pred HHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCc-hHHHHHHHHHhCCeeeeccc
Q 003372 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYP-FSKEASYLAYVYPQVYLDFG 293 (825)
Q Consensus 215 ~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p-~~~e~~~la~~~pNVyld~s 293 (825)
.+...++++.++|+||++|++.+. ..+ .+-.+++...+|..++++.|++++ ....+..++.. ++|+.++
T Consensus 139 ~~~~~~~~a~~~~~pv~iH~~~~~-------~~~-~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~--G~~i~~~ 208 (291)
T 1bf6_A 139 VFIAAALAHNQTGRPISTHTSFST-------MGL-EQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDL--GAYVQFD 208 (291)
T ss_dssp HHHHHHHHHHHHCCCEEEECGGGC-------SHH-HHHHHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHT--TCEEEEC
T ss_pred HHHHHHHHHHHHCCeEEEeCCCCC-------ChH-HHHHHHHHcCCCchhEEEECCCCCCCHHHHHHHHHC--CCEEEEc
Confidence 466678899999999999997421 011 233455533567889999999653 33444445544 4455444
Q ss_pred cc--cCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcch-hhhh---HHHHHHHHHHHHHhhhcCCCCChHHHHHHHH
Q 003372 294 LA--IPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET-YFLG---AKRAREVVFSVLRDTCIDEDLSVGEAIEVAK 367 (825)
Q Consensus 294 ~~--~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~-~~~~---~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~ 367 (825)
.. ........-...++++++.++.+|||++||++..+.. .+.+ ....... +..+ ....++. +.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~----~~~l-~~~g~~~----~~~~ 279 (291)
T 1bf6_A 209 TIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTF----IPQL-RQSGFSQ----ADVD 279 (291)
T ss_dssp CTTCTTTSCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTHHHHTH----HHHH-HHTTCCH----HHHH
T ss_pred cCcccCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHHHHHHH----HHHH-HHcCCCH----HHHH
Confidence 32 1001111123468888999999999999995432110 0000 1111222 2222 2234775 5789
Q ss_pred HHHHHhHHHHhc
Q 003372 368 DIFALNAAQFYK 379 (825)
Q Consensus 368 ~Il~~NA~rly~ 379 (825)
+++.+|++|+|+
T Consensus 280 ~~~~~N~~rl~~ 291 (291)
T 1bf6_A 280 VMLRENPSQFFQ 291 (291)
T ss_dssp HHHTHHHHHHCC
T ss_pred HHHHHhHHHHhC
Confidence 999999999985
No 39
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.26 E-value=2.5e-06 Score=91.08 Aligned_cols=151 Identities=17% Similarity=0.121 Sum_probs=88.6
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCC--cEEEEeCC-CCchHHHHHHHHHhCCeee
Q 003372 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSK--CRFVLLHA-SYPFSKEASYLAYVYPQVY 289 (825)
Q Consensus 213 d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~--l~ivl~H~-g~p~~~e~~~la~~~pNVy 289 (825)
...|...+++|.++|+||.+|+... ...+-++++ +++. .++|+ |+ +.. ..++..+.. .++|
T Consensus 113 ~~~F~~ql~lA~e~~lPv~iH~r~a----------~~~~l~il~--~~~~~~~~~V~-H~fsG~-~e~a~~~l~--~G~y 176 (287)
T 3rcm_A 113 EKALEAQLTLAAQLRLPVFLHERDA----------SERLLAILK--DYRDHLTGAVV-HCFTGE-REALFAYLD--LDLH 176 (287)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESC----------HHHHHHHHH--TTGGGCSCEEE-CSCCCC-HHHHHHHHH--TTCE
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCc----------HHHHHHHHH--HcCCCCCeEEE-EeCCCC-HHHHHHHHH--CCcE
Confidence 3456777899999999999999732 223455676 5543 35554 87 222 233333332 3799
Q ss_pred eccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhh----hh----HHHHHHHHHHHHHhhhcCCCCChHH
Q 003372 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF----LG----AKRAREVVFSVLRDTCIDEDLSVGE 361 (825)
Q Consensus 290 ld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~----~~----~~~~r~~l~~~l~~~v~~g~l~~~~ 361 (825)
+++++++.+. +. ...++++++..|.+|||+.||++..+...+ .+ ..+...++. .+.+ ...++.
T Consensus 177 is~~g~i~~~-k~--~~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v~~-~lA~---~~g~s~-- 247 (287)
T 3rcm_A 177 IGITGWICDE-RR--GTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLR-EVAL---HRGESA-- 247 (287)
T ss_dssp EEECGGGGCT-TT--CGGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHHHH-HHHH---HHTSCH--
T ss_pred EEECchhccc-cC--HHHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHHHH-HHHH---HhCcCH--
Confidence 9999866431 11 125678888999999999999654321111 00 001222221 1111 124665
Q ss_pred HHHHHHHHHHHhHHHHhcCCCCccccCCc
Q 003372 362 AIEVAKDIFALNAAQFYKINLGVKDFASK 390 (825)
Q Consensus 362 a~~~~~~Il~~NA~rly~L~~~~~~~~~~ 390 (825)
+.+..+++.|++|+|+++....-|+|+
T Consensus 248 --eev~~~~~~N~~rlf~l~~~~~~~~~~ 274 (287)
T 3rcm_A 248 --EHTAAHTTATARDFFQLPAENLYFQSH 274 (287)
T ss_dssp --HHHHHHHHHHHHHHTTCCCCC------
T ss_pred --HHHHHHHHHHHHHHHCCChhhhHHhhc
Confidence 578899999999999998766555443
No 40
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.09 E-value=3.3e-05 Score=84.95 Aligned_cols=155 Identities=15% Similarity=0.049 Sum_probs=91.4
Q ss_pred HHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCC-CchHHHHHHHH-HhCCeeeecc
Q 003372 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLA-YVYPQVYLDF 292 (825)
Q Consensus 215 ~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g-~p~~~e~~~la-~~~pNVyld~ 292 (825)
.|..-++++.+.|+||.+|++.+.. + ...+ +++++...|..++++.|++ ......+..++ .. ..|+++
T Consensus 170 ~f~aq~~~A~e~glPViiH~r~gr~------a-~d~l-~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~~--G~yI~f 239 (363)
T 3ovg_A 170 ALEVAARTSILTGCPILVHTQLGTM------A-LEVA-KHLIGFGANPDKIQISHLNKNPDKYYYEKVIKET--GVTLCF 239 (363)
T ss_dssp HHHHHHHHHHHHCCCEEEEEETTCS------H-HHHH-HHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHHH--CCEEEE
T ss_pred HHHHHHHHHHHhCCEEEEeCCCCCC------H-HHHH-HHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHHC--CcEEEE
Confidence 3444467788999999999986411 1 1223 5666445677789999995 23333333333 21 477777
Q ss_pred ccccC--cccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHH-----HHHHHHHHHHHhhhcCCCCChHHHHHH
Q 003372 293 GLAIP--KLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAK-----RAREVVFSVLRDTCIDEDLSVGEAIEV 365 (825)
Q Consensus 293 s~~~~--~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~-----~~r~~l~~~l~~~v~~g~l~~~~a~~~ 365 (825)
++... +.....-...++++++.++.+|||++||+...|...+.+.. .--..+..++...++...++. +.
T Consensus 240 ~g~~~~~~~~~~~ra~~l~~lv~~~p~drILleTDap~~~~l~~~G~~~g~~~n~p~~l~~~~~~~a~~rGis~----ee 315 (363)
T 3ovg_A 240 DGPDRVKYYPDSLLAENIKYLVDKGLQKHITLSLDAGRILYQRNYGLTKGKQTFGLAYLFDRFLPLLKQVGVSK----EA 315 (363)
T ss_dssp CCTTCTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHHHTTEECCCTHHHHHTHHHHHHHHTCCH----HH
T ss_pred CCeeccccCChhHHHHHHHHHHHhcCCCeEEEeCCCCCCcCCCCCCccCCCCCCCccHHHHHHHHHHHHcCCCH----HH
Confidence 76431 11111123478999999999999999997643211111110 000011112222333345775 57
Q ss_pred HHHHHHHhHHHHhcCCCC
Q 003372 366 AKDIFALNAAQFYKINLG 383 (825)
Q Consensus 366 ~~~Il~~NA~rly~L~~~ 383 (825)
+.+++.+|++|+|++...
T Consensus 316 i~~it~~Np~rlf~l~~~ 333 (363)
T 3ovg_A 316 IFDILVNNPKRVLAFDEK 333 (363)
T ss_dssp HHHHHTHHHHHHTSCCCC
T ss_pred HHHHHHHHHHHHHCCCCc
Confidence 999999999999999654
No 41
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=98.05 E-value=2e-05 Score=84.76 Aligned_cols=148 Identities=14% Similarity=0.072 Sum_probs=84.5
Q ss_pred HHHHHHHHHhhCCCcEEEeeC-CCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCC-chHHHHHHHHHhCCeeeecc
Q 003372 215 IFISSLEVAQFLDLPLQIHTG-FGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLAYVYPQVYLDF 292 (825)
Q Consensus 215 ~l~~l~e~~~e~glpvq~H~G-~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~-p~~~e~~~la~~~pNVyld~ 292 (825)
.+...+++|.++|+||.+|++ .+.. .+..+ +++++..+|..++++.|+.. .-..++..++..--+|.++.
T Consensus 152 ~~~~~~~lA~~~~~pv~iH~~~~~~~-------~~~~~-~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~ 223 (314)
T 2vc7_A 152 VIRAAAIANKETKVPIITHSNAHNNT-------GLEQQ-RILTEEGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLDR 223 (314)
T ss_dssp HHHHHHHHHHHHCCCEEEECCTTTTH-------HHHHH-HHHHHTTCCGGGEEETTGGGCCCHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHCCEEEEeCCCcccC-------hHHHH-HHHHHcCCCcccEEEECCCCCCCHHHHHHHHHcCCEEEEeC
Confidence 456678889999999999997 2211 12223 45554356778999999953 22344445554423444543
Q ss_pred ccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcch----hhhhH---------HHHHHHHHHHHHhhhcCCCCCh
Q 003372 293 GLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPET----YFLGA---------KRAREVVFSVLRDTCIDEDLSV 359 (825)
Q Consensus 293 s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~----~~~~~---------~~~r~~l~~~l~~~v~~g~l~~ 359 (825)
.++..+.......+.+..+++.++.+||+++||++..|.. .++.. .+.+..+ .. ++...++.
T Consensus 224 ~~~~~~~~~~~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~----~~-l~~~g~~~ 298 (314)
T 2vc7_A 224 YGLDLFLPVDKRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKPKLAPRWSITLIFEDTI----PF-LKRNGVNE 298 (314)
T ss_dssp TTCTTTSCHHHHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGGCTTSHHHHCTTCSTTHHHHTHH----HH-HHHTTCCH
T ss_pred CCcccCCCHHHHHHHHHHHHHcCCCCeEEEcCCccccccccccchhhhhcCCCCcCHHHHHHHHH----HH-HHHcCCCH
Confidence 2232111222334566777777677999999997432200 01100 0112222 11 12234664
Q ss_pred HHHHHHHHHHHHHhHHHHhc
Q 003372 360 GEAIEVAKDIFALNAAQFYK 379 (825)
Q Consensus 360 ~~a~~~~~~Il~~NA~rly~ 379 (825)
+.+.+++++|++|+|+
T Consensus 299 ----e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 299 ----EVIATIFKENPKKFFS 314 (314)
T ss_dssp ----HHHHHHHTHHHHHHTC
T ss_pred ----HHHHHHHHHCHHHHhC
Confidence 5789999999999985
No 42
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.02 E-value=1.1e-05 Score=84.51 Aligned_cols=143 Identities=14% Similarity=0.038 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHhhCCCcEE-EeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeec
Q 003372 213 DYIFISSLEVAQFLDLPLQ-IHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (825)
Q Consensus 213 d~~l~~l~e~~~e~glpvq-~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld 291 (825)
...|...+++|.++++||. +|+.-. ...+-++++ ++|...-+++|+-..-..++..+.. -++|++
T Consensus 103 ~~~F~~ql~lA~e~~lPviSiH~r~a----------~~~~~~il~--~~~~~~~~v~H~fsG~~e~a~~~l~--~G~yis 168 (254)
T 3gg7_A 103 FAVFQHILRRCEDHGGRILSIHSRRA----------ESEVLNCLE--ANPRSGTPILHWYSGSVTELRRAIS--LGCWFS 168 (254)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTC----------HHHHHHHHH--HCGGGEEEEEETCCSCHHHHHHHHH--TTCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEcCCc----------HHHHHHHHH--HcCCCCcEEEEeCCCCHHHHHHHHc--CCcEEE
Confidence 3456777899999999999 999632 123556777 5665432344871111222333322 379999
Q ss_pred cccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhh-hHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHH
Q 003372 292 FGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFL-GAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIF 370 (825)
Q Consensus 292 ~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~-~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il 370 (825)
+++++.. ...+++++...|.+|||+.||+++.|.-.-. ...+...+. +.+.+. ..++. +.+..++
T Consensus 169 ~~g~~~~------~~~~~~~v~~ip~drlLlETD~P~~~~rg~~n~P~~v~~v~-~~iA~~---~g~~~----ee~~~~~ 234 (254)
T 3gg7_A 169 VGPTMVR------TQKGAALIRSMPRDRVLTETDGPFLELDGQAALPWDVKSVV-EGLSKI---WQIPA----SEVERIV 234 (254)
T ss_dssp ECHHHHT------SHHHHHHHHHSCGGGEEECCCTTTSEETTEECCGGGHHHHH-HHHHHH---HTSCH----HHHHHHH
T ss_pred ECcccCc------hHHHHHHHHHcCCCeEEEeCCCCccccCCCCCCHHHHHHHH-HHHHHH---hCcCH----HHHHHHH
Confidence 9876531 1356888899999999999996543310000 001122222 112111 24565 5788999
Q ss_pred HHhHHHHhcCCCC
Q 003372 371 ALNAAQFYKINLG 383 (825)
Q Consensus 371 ~~NA~rly~L~~~ 383 (825)
++|+.|+|+++.+
T Consensus 235 ~~N~~~lf~~~~~ 247 (254)
T 3gg7_A 235 KENVSRLLGTVRE 247 (254)
T ss_dssp HHHHHHHHHC---
T ss_pred HHHHHHHHCCCcc
Confidence 9999999998743
No 43
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=97.87 E-value=0.0001 Score=81.16 Aligned_cols=149 Identities=15% Similarity=0.183 Sum_probs=89.0
Q ss_pred HHHHHHHHhhCCCcEEEee-CCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCC-c-hHHHHHHHHHhCCeeeecc
Q 003372 216 FISSLEVAQFLDLPLQIHT-GFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-P-FSKEASYLAYVYPQVYLDF 292 (825)
Q Consensus 216 l~~l~e~~~e~glpvq~H~-G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~-p-~~~e~~~la~~~pNVyld~ 292 (825)
|....+++.+.|+||.+|+ |.|+. ...+-.++++...|..++++.|+.. . -...+..++.. .+|+++
T Consensus 192 f~aq~~~A~~~glPV~iH~~gr~~a--------~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~--G~~I~f 261 (364)
T 3k2g_A 192 LRGAARAQVRTGLPLMVHLPGWFRL--------AHRVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQR--GAFLEF 261 (364)
T ss_dssp HHHHHHHHHHHCCCEEEECCTTSCC--------HHHHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHH--TCEEEE
T ss_pred HHHHHHHHHHHCCeEEEecCCCCcc--------HHHHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhC--CcEEEe
Confidence 4444677889999999997 44321 2323345654456667799999941 2 22334444432 578777
Q ss_pred ccc-----cCcc-----cHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchh-hhh---HHHHHHHHHHHHHhhhcCCCCC
Q 003372 293 GLA-----IPKL-----SVQGMISSIKELLELAPTKKVMFSTDAYASPETY-FLG---AKRAREVVFSVLRDTCIDEDLS 358 (825)
Q Consensus 293 s~~-----~~~~-----~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~-~~~---~~~~r~~l~~~l~~~v~~g~l~ 358 (825)
++. |+.. +...-...++++++.++.+|||++||+...|... +.+ ....+... .. ++...++
T Consensus 262 ~g~gt~~~f~~~~~~~~~d~~ra~~l~~lv~~gp~drilleTD~p~~~~~~~~gg~~~~~l~~~~~----~~-l~~~Gis 336 (364)
T 3k2g_A 262 DMIGMDFFYADQGVQCPSDDEVARAILGLADHGYLDRILLSHDVFVKMMLTRYGGNGYAFVTKHFL----PR-LRRHGLD 336 (364)
T ss_dssp CCTTCCCEETTTTEECCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTSHHHHHHH----HH-HHHTTCC
T ss_pred cCCcccccccccccccccHHHHHHHHHHHHHhCCcccEEEeCCCCCCCCCCCCCCCCcchHHHHHH----HH-HHHcCCC
Confidence 764 2210 0011235788999999999999999986433111 111 11122222 11 1223577
Q ss_pred hHHHHHHHHHHHHHhHHHHhcCCCC
Q 003372 359 VGEAIEVAKDIFALNAAQFYKINLG 383 (825)
Q Consensus 359 ~~~a~~~~~~Il~~NA~rly~L~~~ 383 (825)
. +.+.+++.+|++|+|++...
T Consensus 337 ~----eei~~~~~~Np~rlf~l~~~ 357 (364)
T 3k2g_A 337 D----AALETLMVTNPRRVFDASIE 357 (364)
T ss_dssp H----HHHHHHHTHHHHHHHCTTSC
T ss_pred H----HHHHHHHHHHHHHHhCCCcc
Confidence 5 57999999999999998754
No 44
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=97.85 E-value=0.00018 Score=78.06 Aligned_cols=151 Identities=15% Similarity=0.122 Sum_probs=88.4
Q ss_pred HHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCC-CchHHHHHHHHHhCCeeeecccc
Q 003372 216 FISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDFGL 294 (825)
Q Consensus 216 l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g-~p~~~e~~~la~~~pNVyld~s~ 294 (825)
|..-++++.+.|+||.+|++.|.. + ... -+++++...|..++++.||. ..-...+..++. -.+|+++++
T Consensus 170 f~aq~~~A~~~glPViiH~r~g~~------a-~~~-l~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~--~G~~i~~~g 239 (330)
T 3pnz_A 170 IRAVARAHHETKAPIHSHTEAGTM------A-LEQ-IEILKQENIPLEYLSIGHMDRNLDPYYHKQVAK--TGAFMSFDG 239 (330)
T ss_dssp HHHHHHHHHHHCCCEEEECGGGCC------H-HHH-HHHHHHTTCCGGGEEETTGGGSCCHHHHHHHHT--TTCEEEECC
T ss_pred HHHHHHHHHHHCCeEEEeCCCCcC------h-HHH-HHHHHHcCCCCCeEEEecCCCCCCHHHHHHHHH--cCcEEEEcc
Confidence 344467788999999999985411 1 112 34555435566789999994 222333334443 258999887
Q ss_pred ccCcc-cHHH-HHHHHHHHHHHCCCCcEEEecCCCCCcchhhh--h---HHHHHHHHHHHHHhhhcCCCCChHHHHHH-H
Q 003372 295 AIPKL-SVQG-MISSIKELLELAPTKKVMFSTDAYASPETYFL--G---AKRAREVVFSVLRDTCIDEDLSVGEAIEV-A 366 (825)
Q Consensus 295 ~~~~~-~~~g-~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~--~---~~~~r~~l~~~l~~~v~~g~l~~~~a~~~-~ 366 (825)
+.... .++. ....++++++.++.+|||++||+..-+...+. + .......+.+ |...++...++. +. +
T Consensus 240 ~~t~~~~~~~~~~~~l~~lv~~g~~drilleTD~p~~~~~~~~G~~~~~~~~~~~~~~~-l~~~a~~~Gis~----ee~i 314 (330)
T 3pnz_A 240 IAKIKYAPESARIAAILYLVSEGFEDQILVSGDTARKTYYKHYGHGPGLEYIAKKWVPR-FIDEANEKGFDG----EKLV 314 (330)
T ss_dssp TTCTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSHHHHCCSTTTHHHHTHHHH-HHHHHHHTTSCH----HHHH
T ss_pred CcccCCCChHHHHHHHHHHHHcCCCCeEEEeCCCCCCCCCCccCCCCCcchHHHHHHHH-HHHHHHHcCCCH----HHHH
Confidence 64211 1111 23468888999999999999997531100000 0 1011122211 111123456775 45 9
Q ss_pred HHHHHHhHHHHhcCC
Q 003372 367 KDIFALNAAQFYKIN 381 (825)
Q Consensus 367 ~~Il~~NA~rly~L~ 381 (825)
.+++.+|++|+|+++
T Consensus 315 ~~~t~~Np~rlf~l~ 329 (330)
T 3pnz_A 315 KKFFVDNPARCFTFK 329 (330)
T ss_dssp HHHHTHHHHHHSSCC
T ss_pred HHHHHHhHHHHhcCC
Confidence 999999999999985
No 45
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=97.74 E-value=0.00018 Score=79.29 Aligned_cols=154 Identities=15% Similarity=0.145 Sum_probs=89.8
Q ss_pred HHHHHHHHhhC-CCcEEEee-CCCCCCCCCCCCChhchHHHHhhc-CCCCcEEEEeCCCC--chHHHHHHHHHhCCeeee
Q 003372 216 FISSLEVAQFL-DLPLQIHT-GFGDKDLDLRLSNPLHLRAILEDK-RFSKCRFVLLHASY--PFSKEASYLAYVYPQVYL 290 (825)
Q Consensus 216 l~~l~e~~~e~-glpvq~H~-G~gd~~~~~~~~~P~~L~~l~~~~-~~P~l~ivl~H~g~--p~~~e~~~la~~~pNVyl 290 (825)
|..-++++.++ |+||.+|+ +.++. ...+-.++++. ..|..++++.|+.. .-...+..++. -.+|+
T Consensus 181 f~aq~~~A~~~~glPV~iH~~r~~~a--------~~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~--~G~~I 250 (365)
T 3rhg_A 181 LRAAALAQNNNPYASMNIHMPGWQRR--------GDEVLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLD--RGVWL 250 (365)
T ss_dssp HHHHHHHHTTCTTCEEEEECCTTSCC--------HHHHHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHH--TTCEE
T ss_pred HHHHHHHHHHhcCCcEEEECCCCCcC--------HHHHHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHh--CCCEE
Confidence 34446788899 99999997 64322 23334455543 45666799999941 22233344443 26888
Q ss_pred ccccc-----cCcc----cHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhcCCCCChHH
Q 003372 291 DFGLA-----IPKL----SVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGE 361 (825)
Q Consensus 291 d~s~~-----~~~~----~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~ 361 (825)
++++. |++. +...-...++++++.++.+|||++||+...+...+.+.......+ ..+...++...++.
T Consensus 251 ~~~g~g~~~tf~~~~~~~~d~~~a~~l~~li~~g~~drilleTD~p~l~~~~~~G~~~~~~l~-~~~~~~~~~~Gis~-- 327 (365)
T 3rhg_A 251 EFDMIGLDISFPKEGAAPSVMDTVEAVATLIERGYGNQIVLSHDVFLKQMWAKNGGNGWGFVP-NVFLSLLAQRGIDK-- 327 (365)
T ss_dssp EECCTTCCCBCSSSCBCCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCTTTHHH-HTHHHHHHHTTCCH--
T ss_pred EecCCCccccccccccccchHHHHHHHHHHHHhCCCCcEEEeCCCCCCCCCCcCCCCCchhHH-HHHHHHHHHcCCCH--
Confidence 77764 2210 001123478899999999999999998654421111000000111 11111223345775
Q ss_pred HHHHHHHHHHHhHHHHhcCCCCc
Q 003372 362 AIEVAKDIFALNAAQFYKINLGV 384 (825)
Q Consensus 362 a~~~~~~Il~~NA~rly~L~~~~ 384 (825)
+.+..++.+|++|+|++....
T Consensus 328 --e~i~~~~~~Np~rlf~l~~~~ 348 (365)
T 3rhg_A 328 --TIIDKLCIDNPANLLAAENLY 348 (365)
T ss_dssp --HHHHHHTTHHHHHHHHSCCSS
T ss_pred --HHHHHHHHHHHHHHHCCCCcc
Confidence 578999999999999996443
No 46
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=97.72 E-value=0.00015 Score=79.00 Aligned_cols=149 Identities=15% Similarity=0.121 Sum_probs=88.4
Q ss_pred HHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCC-CchHHHHHHHHHhCCeeeecccc
Q 003372 216 FISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDFGL 294 (825)
Q Consensus 216 l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g-~p~~~e~~~la~~~pNVyld~s~ 294 (825)
|..-++++.++|+||.+|+|.|.. + .. .-+++++...|..++++.|+. .....++..++. -..|+++++
T Consensus 175 f~aq~~lA~~~glPViiH~~~gr~------a-~~-~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~--~G~~i~~~g 244 (339)
T 3gtx_A 175 FRAAARVQRETGVPIITHTQEGQQ------G-PQ-QAELLTSLGADPARIMIGHMDGNTDPAYHRETLR--HGVSIAFDR 244 (339)
T ss_dssp HHHHHHHHHHHCCCEEEECSTTCC------H-HH-HHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHT--TTCEEEECC
T ss_pred HHHHHHHHHHHCCeEEEeCCCCcC------H-HH-HHHHHHHcCCCcccEEEEccCCCCCHHHHHHHHH--cCcEEEEcc
Confidence 334467788999999999987521 1 11 344666445677789999994 233344444443 257888776
Q ss_pred ccC--cc---cHHHHHHHHHHHHHHCCCCcEEEecCCCCC----cchhhhhHHHHH------HHHHHHHHhhhcCCCCCh
Q 003372 295 AIP--KL---SVQGMISSIKELLELAPTKKVMFSTDAYAS----PETYFLGAKRAR------EVVFSVLRDTCIDEDLSV 359 (825)
Q Consensus 295 ~~~--~~---~~~g~~~~l~~~le~~~~~kilfgSD~~~~----P~~~~~~~~~~r------~~l~~~l~~~v~~g~l~~ 359 (825)
+.. +. ....-...++++++.++.+|||++||+... |. +.+.....+ ..+..++...++...++.
T Consensus 245 ~~t~~~~~~p~~~~~~~~l~~li~~~~~drilleTD~p~~~~~~P~-~~p~~~~~~~g~n~p~~l~~~~~~~~~~~Gis~ 323 (339)
T 3gtx_A 245 IGLQGMVGTPTDAERLSVLTTLLGEGYADRLLLSHDSIWHWLGRPP-AIPEAALPAVKDWHPLHISDDILPDLRRRGITE 323 (339)
T ss_dssp TTCCSSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCC-CCCGGGHHHHHTCSTTHHHHTHHHHHHHTTCCH
T ss_pred CccccccCCCchHHHHHHHHHHHHhcCCCeEEEecCCCccccCCcc-cccccccccCCCCCchhHHHHHHHHHHHcCCCH
Confidence 521 10 000113478899999999999999997642 10 000010000 111122223333346775
Q ss_pred HHHHHHHHHHHHHhHHHHhc
Q 003372 360 GEAIEVAKDIFALNAAQFYK 379 (825)
Q Consensus 360 ~~a~~~~~~Il~~NA~rly~ 379 (825)
+.+.+++.+|++|+|+
T Consensus 324 ----e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 324 ----EQVGQMTVGNPARLFG 339 (339)
T ss_dssp ----HHHHHHHTHHHHHHHC
T ss_pred ----HHHHHHHHHHHHHHhC
Confidence 5799999999999985
No 47
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=97.71 E-value=0.0006 Score=74.75 Aligned_cols=153 Identities=15% Similarity=0.101 Sum_probs=86.0
Q ss_pred HHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCC-CchHHHHHHHHHhCCeeeecc
Q 003372 214 YIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHAS-YPFSKEASYLAYVYPQVYLDF 292 (825)
Q Consensus 214 ~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g-~p~~~e~~~la~~~pNVyld~ 292 (825)
..|....+++.+.|+||.+|++.+.. .+..++-+.+. ..|--++++.|++ ..-...+..++..--.+.+|.
T Consensus 193 k~frA~a~aa~etG~Pv~iHt~~~~~-------~~e~l~iL~ee-G~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD~ 264 (360)
T 3tn4_A 193 MFFRAAARAQKETGAVIITHTQEGTM-------GPEQAAYLLEH-GADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFDR 264 (360)
T ss_dssp HHHHHHHHHHHHHCCEEEEECSTTCC-------HHHHHHHHHHT-TCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHHHHHHhCCcEEEEcCcccC-------CHHHHHHHHHc-CCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEcc
Confidence 34555678889999999999986521 23344444443 4566788999952 222222334444333444443
Q ss_pred ccccCcc--cHH-HHHHHHHHHHHHCCCCcEEEecCCC----CCcchhhhhHHH------HHHHHHHHHHhhhcCCCCCh
Q 003372 293 GLAIPKL--SVQ-GMISSIKELLELAPTKKVMFSTDAY----ASPETYFLGAKR------AREVVFSVLRDTCIDEDLSV 359 (825)
Q Consensus 293 s~~~~~~--~~~-g~~~~l~~~le~~~~~kilfgSD~~----~~P~~~~~~~~~------~r~~l~~~l~~~v~~g~l~~ 359 (825)
-++.... ..+ --...++++++.++.+|||.+||+. ..|...-.+.+. +...+.+++..+.+. .++.
T Consensus 265 iG~~~~~~~p~d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~py~~p~p~r~~~~~~~y~~i~~~~ip~L~~~-Gvs~ 343 (360)
T 3tn4_A 265 FGIQGMVGAPTDEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPEPFAEMMKNWHVEHLFVNIIPALKNE-GIRD 343 (360)
T ss_dssp TTCCCSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCHHHHHHTTTCSTTHHHHTHHHHHHHT-TCCH
T ss_pred cccccccCCCChHHHHHHHHHHHHhcCcceEEEecCCCcccccCCCCCcccccccCCCCCchhHHHHHHHHHHHc-CCCH
Confidence 2221111 111 1234788999999999999999961 112100000000 112334444444333 4664
Q ss_pred HHHHHHHHHHHHHhHHHHhc
Q 003372 360 GEAIEVAKDIFALNAAQFYK 379 (825)
Q Consensus 360 ~~a~~~~~~Il~~NA~rly~ 379 (825)
+.+++|+.+|++|+|-
T Consensus 344 ----e~I~~i~~~NP~rlfs 359 (360)
T 3tn4_A 344 ----EVLEQMFIGNPAALFS 359 (360)
T ss_dssp ----HHHHHHHTHHHHHHHC
T ss_pred ----HHHHHHHHHhHHHHhc
Confidence 5799999999999983
No 48
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=97.64 E-value=0.00028 Score=76.73 Aligned_cols=148 Identities=17% Similarity=0.086 Sum_probs=86.3
Q ss_pred HHHHHHHHhhCCCcEEEeeCC-CCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCC-chHHHHHHHHHhCCeeeeccc
Q 003372 216 FISSLEVAQFLDLPLQIHTGF-GDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY-PFSKEASYLAYVYPQVYLDFG 293 (825)
Q Consensus 216 l~~l~e~~~e~glpvq~H~G~-gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~-p~~~e~~~la~~~pNVyld~s 293 (825)
|....+++.++|+||.+|+|. |. . ...+-.+++....+..++++.||.. .-...+..++. -.+|++++
T Consensus 150 f~~q~~lA~~~glPv~iH~~~~~r------~--a~e~l~iL~~~g~~~~~~~i~H~f~~~~~e~a~~~~~--~G~~i~~~ 219 (330)
T 2ob3_A 150 LKAAARASLATGVPVTTHTAASQR------D--GEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAA--RGYLIGLD 219 (330)
T ss_dssp HHHHHHHHHHHCCCEEEECCGGGT------H--HHHHHHHHHHTTCCGGGEEECSGGGCCCHHHHHHHHH--TTCEEEEC
T ss_pred HHHHHHHHHHhCCeEEEECCCCCC------C--HHHHHHHHHHcCcCcccEEEeCCCCCCCHHHHHHHHh--CCCEEEeC
Confidence 344467888999999999972 21 0 1122235554334556888999831 22223333333 26898887
Q ss_pred --cccCc--------------ccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhh---hhHH-------HHHHHHHHH
Q 003372 294 --LAIPK--------------LSVQGMISSIKELLELAPTKKVMFSTDAYASPETYF---LGAK-------RAREVVFSV 347 (825)
Q Consensus 294 --~~~~~--------------~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~---~~~~-------~~r~~l~~~ 347 (825)
++..+ .+...-...++++++.+|.+|||++||++.++. .+ .+.. .+...+..+
T Consensus 220 ~~G~~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~~l~-~~~~~~g~~~~~n~pn~~~~~~~~~ 298 (330)
T 2ob3_A 220 HIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTFGFS-SYVTNIMDVMDRVNPDGMAFIPLRV 298 (330)
T ss_dssp CTTCCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCSEEC-SSSTTHHHHHHHHCTTGGGHHHHTH
T ss_pred CCccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCCCcc-cccccCCCcccccCCCCcchHHHHH
Confidence 54322 111111246889999999999999999754111 11 0111 111123333
Q ss_pred HHhhhcCCCCChHHHHHHHHHHHHHhHHHHhc
Q 003372 348 LRDTCIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (825)
Q Consensus 348 l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~ 379 (825)
+.++.+. .++. +.+..++..|++|+|+
T Consensus 299 ia~l~~~-G~~~----eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 299 IPFLREK-GVPQ----ETLAGITVTNPARFLS 325 (330)
T ss_dssp HHHHHHT-TCCH----HHHHHHHTHHHHHHHS
T ss_pred HHHHHHc-CCCH----HHHHHHHHHHHHHHhc
Confidence 4444443 4775 5788999999999998
No 49
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.60 E-value=2.3e-05 Score=82.36 Aligned_cols=138 Identities=19% Similarity=0.241 Sum_probs=77.3
Q ss_pred HHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeeccc-
Q 003372 215 IFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFG- 293 (825)
Q Consensus 215 ~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s- 293 (825)
.|...+++|.++|+||.+|+..+.. ......+-++++....|..++++.|++..... .+.. -++|++++
T Consensus 111 ~f~~ql~lA~e~~lPv~iH~r~~~~-----~~a~~~~~~il~~~~~~~~~~vi~H~~~~~a~---~~l~--~G~yis~~~ 180 (261)
T 3guw_A 111 VLKSQLELAKRMDVPCIIHTPRGNK-----LKATRKTLEILESLDFPADLAVIDHVNFETLD---MVLE--TEYWIGLTV 180 (261)
T ss_dssp HHHHHHHHHHHHTCCEEEECCSSST-----THHHHHHHHHHHHTTCCTTSEEEESCCTTTHH---HHHT--SSSEEEEEC
T ss_pred HHHHHHHHHHHhCCeEEEEcCCCcc-----cchHHHHHHHHHHcCCCCCCEEEEeCCHHHHH---HHHh--CCEEEEecC
Confidence 4566789999999999999974310 01123455667643356677888999543332 2222 37999988
Q ss_pred --cccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHH
Q 003372 294 --LAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFA 371 (825)
Q Consensus 294 --~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~ 371 (825)
++..+ + ..++++...|.+|||+.||++.-|.. ..+..+.+. .+.+. ..++ + +.++++
T Consensus 181 ~pg~~t~--~-----~~~~~v~~ipldrlLlETD~P~~pn~----P~~v~~~~~-~la~~---~g~~-----~-v~~~~~ 239 (261)
T 3guw_A 181 QPGKLSA--E-----DAARIVAEHGPERFMLNSDAGYRDVE----ITTVAEAAV-KIEEA---VGRE-----E-MEKVAR 239 (261)
T ss_dssp C--------------CCTTGGGGCC-CCEEEECCCCCC----------CCCCTT-HHHHH---CTTG-----G-GGHHHH
T ss_pred CCCcccH--H-----HHHHHHHhCCcceEEEecCCCCCCCC----HHHHHHHHH-HHHhh---CChh-----H-HHHHHH
Confidence 54322 1 12567788999999999995432210 001111111 11110 1232 2 889999
Q ss_pred HhHHHHhcCCCC
Q 003372 372 LNAAQFYKINLG 383 (825)
Q Consensus 372 ~NA~rly~L~~~ 383 (825)
+||+|+|+++..
T Consensus 240 ~Na~rlf~~~~~ 251 (261)
T 3guw_A 240 ENARKFLRVLEA 251 (261)
T ss_dssp SSHHHHTTC---
T ss_pred HHHHHHHCCCch
Confidence 999999998654
No 50
>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A
Probab=97.05 E-value=0.0059 Score=67.32 Aligned_cols=126 Identities=17% Similarity=0.247 Sum_probs=81.6
Q ss_pred eEEEeeeeEEEEEeecccCCCCCCccCCCCCcCcCCccCCchHHHHHHHHHHHhCCCCe--eeeecCCCCCceEEecCcC
Q 003372 524 VLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISV--EQLHAEAGKGQFEIALGHT 601 (825)
Q Consensus 524 ~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~v--e~~h~E~~pGQ~Ei~l~~~ 601 (825)
.+.+|+|.|+.++++. .+ .+.. + . .++ |+..+=.+ ..+..|..-+|.|++.+|.
T Consensus 11 ~~~~GiE~E~~~Vd~~--~g----~~~~---~------~------~~~---l~~~~~~~~~~~it~E~~~~qlEl~t~p~ 66 (372)
T 1r8g_A 11 PFTLGIELEMQVVNPP--GY----DLSQ---D------S------SML---IDAVKNKITAGEVKHDITESMLELATDVC 66 (372)
T ss_dssp TTCEEEEEEEEEEETT--TT----EECS---C------C------HHH---HTTTSSSCSSSEEEECSSSSEEEEECCSB
T ss_pred CCceEEEEEEeeECCC--CC----CcCc---c------H------HHH---HHhchhcccCCcccchhhccEEEecCCCC
Confidence 3689999999999862 12 1111 0 0 122 22222111 4688899999999999997
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHCCCeE---Eecccc-cC--------------------------CCCcccccCCCCCC
Q 003372 602 -VAAKAADNLIFTREVLRAVARKHGLLA---TFVPNL-WQ--------------------------NGENVFMASDSSSK 650 (825)
Q Consensus 602 -~~l~aaD~~~~~r~~i~~iA~~~Gl~A---tF~pKl-~~--------------------------~g~n~f~~~~~~~~ 650 (825)
+.-++.+.+...+..++++|.++|... .+.|++ |. .|.+++++.++
T Consensus 67 ~~~~e~~~~L~~~~~~~~~~a~~~g~~l~~~g~~P~~~~~~~~i~~~~rY~~l~~~~g~~~~~~~i~g~hvhv~~~~--- 143 (372)
T 1r8g_A 67 RDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCAS--- 143 (372)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCGGGGCSCCBCEEEEEEECSS---
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCEEEecCCCCCCCCccCCCCCchHHHHHHHHHHHHHHhhceeeEEEEeCCCC---
Confidence 678899999999999999999999765 445542 11 12233332211
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHhhhCCCC
Q 003372 651 HGMSSVGEKFMAGVLHHLSSILAFTAPVP 679 (825)
Q Consensus 651 ~~ls~~~~~fiaGil~h~~al~a~~~P~~ 679 (825)
++..-..+..++.++|-++|+++.++
T Consensus 144 ---~~~~~~~~~~~~~~~p~l~aL~anSP 169 (372)
T 1r8g_A 144 ---GDDAIYLLHGLSRFVPHFIALSAASP 169 (372)
T ss_dssp ---HHHHHHHHHHHHTTHHHHHHHHCCBC
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22334555667777899999987765
No 51
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=96.99 E-value=0.0016 Score=70.33 Aligned_cols=139 Identities=12% Similarity=0.105 Sum_probs=79.8
Q ss_pred HHHHHHHHHhh-CCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCch-HHHHHHHHHhCCeeeecc
Q 003372 215 IFISSLEVAQF-LDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPF-SKEASYLAYVYPQVYLDF 292 (825)
Q Consensus 215 ~l~~l~e~~~e-~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~-~~e~~~la~~~pNVyld~ 292 (825)
.|...+++|.+ +++||.+|+--. . ..+-++++....+..+.|+ |+ +.- ..++-.+.. -++|+++
T Consensus 155 ~F~~ql~lA~e~~~lPviiH~r~A---------~-~d~l~iL~~~~~~~~~gVi-H~-FsGs~e~a~~~l~--lG~yis~ 220 (325)
T 3ipw_A 155 GYRTLSILHQKYPYLPFFFHCRKS---------W-SDLCQLNKELGYNGCKGVV-HC-FDGTEEEMNQILN--EGWDIGV 220 (325)
T ss_dssp HHHHTHHHHHHCTTCCEEEEEESC---------H-HHHHHHHHHTTCTTSCEEE-CS-CCCCHHHHHHHHH--TTCEEEE
T ss_pred HHHHHHHHHHHhhCCeEEEEeCch---------H-HHHHHHHHhcCCCCCcEEE-EE-CCCCHHHHHHHHh--cCcEEee
Confidence 45555789999 999999999632 1 1244566621222345554 98 211 122223322 2699999
Q ss_pred ccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCc-chh----------hh-------------h----HHHHHHHH
Q 003372 293 GLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASP-ETY----------FL-------------G----AKRAREVV 344 (825)
Q Consensus 293 s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P-~~~----------~~-------------~----~~~~r~~l 344 (825)
++..- -. ...+ +++...|.+|||.-||+++.+ ... .+ + ..+...++
T Consensus 221 ~G~~~-k~----~~~~-~~v~~iPldrlLlETDaP~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~g~rNeP~~v~~v~ 294 (325)
T 3ipw_A 221 TGNSL-QS----IELL-NVMKQIPIERLHIETDCPYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYVQRRNEPSNIIDIA 294 (325)
T ss_dssp CSGGG-SS----HHHH-HHHTTSCGGGEEECCCTTSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCBTTCCCGGGHHHHH
T ss_pred Ccccc-Cc----HHHH-HHHHhCCcccEEEeCCCccccccccccchhcccccCccccccccccccccCCcCcHHHHHHHH
Confidence 88531 11 1223 688899999999999976531 000 00 0 01122222
Q ss_pred HHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCC
Q 003372 345 FSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 345 ~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~ 381 (825)
+.+.+. ..++. +.+..+.+.|+.|+|++.
T Consensus 295 -~~iA~l---~g~~~----eeva~~t~~Na~~lF~~~ 323 (325)
T 3ipw_A 295 -IIMSSI---KHISL----FEFVNKVYSNSMNMYFPT 323 (325)
T ss_dssp -HHHHHH---HTCCH----HHHHHHHHHHHHHHHSCC
T ss_pred -HHHHHh---hCcCH----HHHHHHHHHHHHHHhCcC
Confidence 222222 24665 578889999999999875
No 52
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=95.95 E-value=0.0052 Score=67.02 Aligned_cols=79 Identities=13% Similarity=0.145 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCCh----hchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCee
Q 003372 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNP----LHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (825)
Q Consensus 213 d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P----~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNV 288 (825)
+..+.++++.+++.|.|+.+|.+..+...+...+.. ..+..++. +++++++++.|.+..-..+++.-++ .||
T Consensus 119 ~~~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~~~~~~i~~~la--~~~~~~~hi~Hvst~~~~~~i~~ak--~~V 194 (347)
T 2z26_A 119 VDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQ--RLTALKVVFEHITTKDAADYVRDGN--ERL 194 (347)
T ss_dssp GGGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHHHHTHHHHHH--HSTTCCEEECSCCSHHHHHHHHTSC--TTE
T ss_pred HHHHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHHHHHHHHHHHHH--hhcCCcEEEEECCcHHHHHHHHHhC--CCc
Confidence 335677889999999999999985431111000011 11222344 6899999999987543333333232 589
Q ss_pred eeccccc
Q 003372 289 YLDFGLA 295 (825)
Q Consensus 289 yld~s~~ 295 (825)
+++++..
T Consensus 195 t~e~~ph 201 (347)
T 2z26_A 195 AATITPQ 201 (347)
T ss_dssp EEEECHH
T ss_pred eEeecch
Confidence 9987643
No 53
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=95.92 E-value=0.028 Score=60.54 Aligned_cols=67 Identities=7% Similarity=0.123 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCCCcc---------------------------hh--hhhHHHHHHHHHHHHHhh
Q 003372 301 VQGMISSIKELLELAPTKKVMFSTDAYASPE---------------------------TY--FLGAKRAREVVFSVLRDT 351 (825)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~~P~---------------------------~~--~~~~~~~r~~l~~~l~~~ 351 (825)
.+.+.+.+..+.+.+|.++|.+||| ||. .. +.....+.. ++.++
T Consensus 225 ~~~~~~hi~~i~~~~G~dhVgiGsD---f~~~~~~~~~~~~~~~dg~~~~~~~~G~~~~~~gl~~~~~~~~----l~~~L 297 (325)
T 2i5g_A 225 IDDYAEAIEYVMNIVGEDAIGIGTD---FTQGHGHDFFEWLTHDKGYARRLTNFGKIVNPLGIRTVGEFPN----LTETL 297 (325)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEECCC---BCTTCCHHHHHHHHBGGGTSSBCCCCCSCCCCBTCSSGGGTHH----HHHHH
T ss_pred HHHHHHHHHHHHHhcCCceEEECCc---CcccccccchhhhcccccccccccccCCCCCcccCCCHHHHHH----HHHHH
Confidence 4566778889999999999999999 530 00 001222222 23333
Q ss_pred hcCCCCChHHHHHHHHHHHHHhHHHHhc
Q 003372 352 CIDEDLSVGEAIEVAKDIFALNAAQFYK 379 (825)
Q Consensus 352 v~~g~l~~~~a~~~~~~Il~~NA~rly~ 379 (825)
.+. .++. +.+++|+++|+.|+|+
T Consensus 298 ~~~-G~se----~~i~ki~g~N~lRvl~ 320 (325)
T 2i5g_A 298 LKR-GMPE----RVVRKVMGENWVRVLR 320 (325)
T ss_dssp HHT-TCCH----HHHHHHHTHHHHHHHH
T ss_pred HHc-CCCH----HHHHHHHHHHHHHHHH
Confidence 333 4674 5799999999999985
No 54
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=95.83 E-value=0.079 Score=58.49 Aligned_cols=96 Identities=18% Similarity=0.286 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhC----CCcEEEeeCCCCCCCCCCCCChhchHHHHhhc-------------------------CCC-CcE
Q 003372 215 IFISSLEVAQFL----DLPLQIHTGFGDKDLDLRLSNPLHLRAILEDK-------------------------RFS-KCR 264 (825)
Q Consensus 215 ~l~~l~e~~~e~----glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~-------------------------~~P-~l~ 264 (825)
.|..-+++|.++ ++||.+|+--. .-. +-++++.. +|| ..+
T Consensus 180 ~F~~QL~LA~e~~~~~~lPv~IH~R~A---------~~d-~l~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (401)
T 3e2v_A 180 FFEEQLKISCLNDKLSSYPLFLHMRSA---------CDD-FVQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHPDRK 249 (401)
T ss_dssp HHHHHHHHTTSSHHHHTSCEEEEEESC---------HHH-HHHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCTTCC
T ss_pred HHHHHHHHHHhhhccCCCeEEEEecch---------HHH-HHHHHHHhhccccccccccccccccccccccccccCCCCc
Confidence 455557889999 99999998421 111 22233210 122 234
Q ss_pred EEEeCC-CCchHHHHHHHHHhCCeeeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCC
Q 003372 265 FVLLHA-SYPFSKEASYLAYVYPQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYA 328 (825)
Q Consensus 265 ivl~H~-g~p~~~e~~~la~~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~ 328 (825)
+++|+ +.. ..++-.+...-+|+|+++++.. .-+ ... .+++...|.+|||.-||+++
T Consensus 250 -~V~H~FsGs-~e~a~~~l~lG~~~yis~~g~~-~k~----~~~-~e~v~~iPldrLLlETDaP~ 306 (401)
T 3e2v_A 250 -LVVHSFTGS-AIDLQKLLNLSPNIFIGVNGCS-LRT----EEN-LAVVKQIPTERLLLETDAPW 306 (401)
T ss_dssp -EEECSCCCC-HHHHHHHHHHCTTEEEEECGGG-GSS----HHH-HHHHHTSCGGGEEECCCTTS
T ss_pred -EEEEcCCCC-HHHHHHHHhCCCCEEEEeCCEe-cCC----HHH-HHHHHhCCchhEEEecCCCC
Confidence 45698 111 2333344444478999999863 111 122 37888999999999999774
No 55
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, R regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A*
Probab=92.30 E-value=0.16 Score=57.26 Aligned_cols=43 Identities=23% Similarity=0.279 Sum_probs=38.1
Q ss_pred eecCCCCCceEEecCcC-hHHHHHHHHHHHHHHHHHHHHHCCCeE
Q 003372 585 LHAEAGKGQFEIALGHT-VAAKAADNLIFTREVLRAVARKHGLLA 628 (825)
Q Consensus 585 ~h~E~~pGQ~Ei~l~~~-~~l~aaD~~~~~r~~i~~iA~~~Gl~A 628 (825)
+..|-+ +|+|++..|. +.-++.+.+...+..++++|.++|+..
T Consensus 91 i~~E~~-~qiEl~t~p~~~~~e~~~~l~~~~~~~~~~a~~~g~~l 134 (449)
T 2gwd_A 91 ISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGF 134 (449)
T ss_dssp EEECTT-CCEEEECCCBSSHHHHHHHHHHHHHHHHHHHHHHTEEE
T ss_pred EEecCC-ceEEecCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCce
Confidence 666776 9999999997 577899999999999999999999765
No 56
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=91.32 E-value=0.6 Score=51.46 Aligned_cols=70 Identities=11% Similarity=0.088 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCC---CcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHH
Q 003372 301 VQGMISSIKELLELAPTKKVMFSTDAYA---SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQF 377 (825)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~---~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rl 377 (825)
.+.+...|..+.+++|.+.|-+|||--. .|+. +.....+. +++.++.+. .+|. +.+++|+++|..|+
T Consensus 296 l~dv~~HIdhi~~l~G~dhVgiGsDfDG~~~~P~g-l~dvs~~p----~L~~~L~~r-G~se----~di~ki~g~N~lRv 365 (400)
T 3id7_A 296 VSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDG-LGDVSGYP----NLIAELLDR-GWSQ----SDLAKLTWKNAVRV 365 (400)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEECCCBTTCSCCCBT-CSSTTCHH----HHHHHHHHT-TCCH----HHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCceEEECCCCCCCCCCCCC-CCCHHHHH----HHHHHHhhc-CCCH----HHHHHHHHHhHHHH
Confidence 4566788999999999999999999321 2321 11111222 233344444 4775 58999999999999
Q ss_pred hcC
Q 003372 378 YKI 380 (825)
Q Consensus 378 y~L 380 (825)
++-
T Consensus 366 l~~ 368 (400)
T 3id7_A 366 LDA 368 (400)
T ss_dssp HHH
T ss_pred HHH
Confidence 964
No 57
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=91.23 E-value=0.91 Score=49.33 Aligned_cols=70 Identities=7% Similarity=0.067 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCC--CCcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHh
Q 003372 301 VQGMISSIKELLELAPTKKVMFSTDAY--ASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (825)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~--~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly 378 (825)
.+.+.+.+..+.+++|.+.|-+|||-- ..|.. +.....+. +++.++.+. .++. +.+++|+++|..|+|
T Consensus 282 l~~~~~Hi~hi~~l~G~dhVgiGsDfdG~~~p~g-l~d~s~~p----~L~~~L~~r-G~se----~~i~ki~g~N~lRvl 351 (364)
T 3ly0_A 282 WEPVLRHLDHLIDRLGEDHVGMGSDFDGATIPQG-IADVTGLP----ALQAAMRAH-GYDE----PLMRKLCHENWYGLL 351 (364)
T ss_dssp SHHHHHHHHHHHHHHCTTSEEECCCBTTSCCCTT-TCSGGGHH----HHHHHHHHH-TCCH----HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCC-CCCHHHHH----HHHHHHHHC-CCCH----HHHHHHHhHhHHHHH
Confidence 456778899999999999999999921 12321 11122222 233333333 4674 589999999999999
Q ss_pred cC
Q 003372 379 KI 380 (825)
Q Consensus 379 ~L 380 (825)
+-
T Consensus 352 ~~ 353 (364)
T 3ly0_A 352 ER 353 (364)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 58
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=91.23 E-value=0.8 Score=50.83 Aligned_cols=70 Identities=11% Similarity=0.107 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCC--CcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHh
Q 003372 301 VQGMISSIKELLELAPTKKVMFSTDAYA--SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (825)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~--~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly 378 (825)
.+.+...+..+.+.+|.+.|-+|||--. .|.. +.....+... +.++++. .+|. +.+++|+++|..|++
T Consensus 335 l~~~~~Hidhi~~~~G~dhVGiGsDfDG~~~~~g-l~dvs~~p~l----~~~L~~r-G~se----~di~ki~ggN~lRVl 404 (417)
T 3b40_A 335 LKELVDAIDYTVKKVGIDHVGISSDFNDGGGVDG-WKDVSEIRNV----TAELITR-GYSD----ADIAKLWGGNFLRAW 404 (417)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEECCBTTTCCBBT-BCSGGGHHHH----HHHHHHH-TCCH----HHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEEcCCCCCCCCCCC-CCCHHHHHHH----HHHHHhc-CCCH----HHHHHHHHHHHHHHH
Confidence 4456778888999999999999999211 1221 1222223333 3333433 4674 579999999999998
Q ss_pred cC
Q 003372 379 KI 380 (825)
Q Consensus 379 ~L 380 (825)
+-
T Consensus 405 ~~ 406 (417)
T 3b40_A 405 GE 406 (417)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 59
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=91.18 E-value=0.73 Score=50.26 Aligned_cols=70 Identities=14% Similarity=0.215 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCC---CcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHH
Q 003372 301 VQGMISSIKELLELAPTKKVMFSTDAYA---SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQF 377 (825)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~---~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rl 377 (825)
.+.+...+..+.+.+|.+.|.+|||--. .|.. +.....+... +.++.+. .++. +.+++|+++|..|+
T Consensus 264 ~~~~~~hi~hi~~~~G~dhVgiGsDfdG~~~~p~g-l~d~~~~p~l----~~~L~~~-G~se----~~i~ki~g~N~lRv 333 (369)
T 1itu_A 264 LSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEG-LEDVSKYPDL----IAELLRR-NWTE----AEVKGALADNLLRV 333 (369)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBT-CSSTTCHHHH----HHHHHHT-TCCH----HHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEECCCCCCCCCCCCC-CCCHHHHHHH----HHHHHHc-CCCH----HHHHHHHhHhHHHH
Confidence 4566778888999999999999999322 2321 1112222222 3333333 4674 58999999999999
Q ss_pred hcC
Q 003372 378 YKI 380 (825)
Q Consensus 378 y~L 380 (825)
++-
T Consensus 334 l~~ 336 (369)
T 1itu_A 334 FEA 336 (369)
T ss_dssp HHH
T ss_pred HHH
Confidence 974
No 60
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=89.78 E-value=1.8 Score=46.27 Aligned_cols=70 Identities=16% Similarity=0.118 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCC---CcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHH
Q 003372 301 VQGMISSIKELLELAPTKKVMFSTDAYA---SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQF 377 (825)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~---~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rl 377 (825)
.+.+.+.+..+.+++|.+.|-+|||--. .|.. +..... +.++..++.+ | ++. +.+++|+++|+.|+
T Consensus 239 l~~~~~Hi~hi~~l~G~dhVgiGsDfDG~~~~p~g-l~d~s~----~p~L~~~L~~-g-~se----~~i~ki~g~N~lRv 307 (318)
T 3neh_A 239 TEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKG-LEHVGK----YQSFLETLEK-H-YTK----EEIEGFASRNFLNH 307 (318)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEECCCBTSCSSCBBT-BSSGGG----HHHHHHHHTT-T-SCH----HHHHHHHTHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCCCC-CCCHHH----HHHHHHHHHh-c-CCH----HHHHHHHhHhHHHH
Confidence 4567789999999999999999999322 2221 111111 2234445555 4 775 58999999999999
Q ss_pred hcCC
Q 003372 378 YKIN 381 (825)
Q Consensus 378 y~L~ 381 (825)
|+-+
T Consensus 308 ~~~~ 311 (318)
T 3neh_A 308 LPKE 311 (318)
T ss_dssp CCC-
T ss_pred Hhhh
Confidence 9754
No 61
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=89.06 E-value=1.7 Score=48.16 Aligned_cols=69 Identities=14% Similarity=0.105 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEecCCCC--CcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHh
Q 003372 301 VQGMISSIKELLELAPTKKVMFSTDAYA--SPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFY 378 (825)
Q Consensus 301 ~~g~~~~l~~~le~~~~~kilfgSD~~~--~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly 378 (825)
.+.+...+..+.+.+|.+.|-+|||--. .|.. +.....+. +++.++++. .+|. +.+++|+++|..|++
T Consensus 336 l~~~~~Hidhi~~~~G~dhVgiGsDfDG~~~~~g-l~dvs~~p----~L~~~Ll~r-G~se----~di~ki~g~N~lRvl 405 (417)
T 2rag_A 336 FDLYMKSMLHVLKVAGPKGVCVGADWDGGGGMDG-FEDITDLP----KITARLKAE-GYSD----ADIEAIWSGNVLRIV 405 (417)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEECCCTTTTCCBBT-BSSGGGTH----HHHHHHHHT-TCCH----HHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCceEEEccCCCCCCCCCC-CCCHHHHH----HHHHHHHHc-CCCH----HHHHHHHHHHHHHHH
Confidence 4456778888999999999999999222 1211 11222222 233344444 4674 579999999999998
Q ss_pred c
Q 003372 379 K 379 (825)
Q Consensus 379 ~ 379 (825)
+
T Consensus 406 ~ 406 (417)
T 2rag_A 406 D 406 (417)
T ss_dssp H
T ss_pred H
Confidence 6
No 62
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=88.37 E-value=2.6 Score=45.84 Aligned_cols=75 Identities=17% Similarity=0.148 Sum_probs=49.1
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhch---HHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCee
Q 003372 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHL---RAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQV 288 (825)
Q Consensus 212 ~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L---~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNV 288 (825)
++..+..+++.+++.|.|+.+|.-..+. ...+.-..+ ..+++ ++|+.++.+.|.+..-..++..-| .+|
T Consensus 134 ~~~~l~~~l~~~~~~g~~v~vHaEd~~~---i~~~E~~ai~r~~~la~--~~~g~~lhi~HvSt~~~v~~I~~A---~~V 205 (359)
T 3pnu_A 134 DIEYLKPTLEAMSDLNIPLLVHGETNDF---VMDRESNFAKIYEKLAK--HFPRLKIVMEHITTKTLCELLKDY---ENL 205 (359)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCCCSSC---GGGTTGGGHHHHHHHHH--HCTTSCEEECSCCSHHHHHHHHHC---TTE
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCchH---hHHHHHHHHHHHHHHHH--HcCCCcEEEEecCcHHHHHHHHhc---CCc
Confidence 5567888999999999999999874321 111222233 34555 699999999999754333332222 678
Q ss_pred eecccc
Q 003372 289 YLDFGL 294 (825)
Q Consensus 289 yld~s~ 294 (825)
+.+++.
T Consensus 206 taEv~p 211 (359)
T 3pnu_A 206 YATITL 211 (359)
T ss_dssp EEEECS
T ss_pred eEEEec
Confidence 777764
No 63
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=87.37 E-value=10 Score=40.58 Aligned_cols=144 Identities=17% Similarity=0.090 Sum_probs=76.9
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCC---chHHHHHHHHHhCCee
Q 003372 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY---PFSKEASYLAYVYPQV 288 (825)
Q Consensus 212 ~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~---p~~~e~~~la~~~pNV 288 (825)
.+..+..+++.+.++|+|+.+|++... ........+....+.+ .+ .+.|+.. +...+....+... ++
T Consensus 172 ~~~~l~~~~~~a~~~g~~v~~H~~~~~----~~~~~~~~i~~~~~~G----~~-~i~H~~~~~~~~~~~~~~~~~~~-g~ 241 (386)
T 2vun_A 172 NPEDAAPMVEWAHKHGFKVQMHTGGTS----IPGSSTVTADDVIKTK----PD-VVSHINGGPTAISVQEVDRIMDE-TD 241 (386)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEECSCCS----CSTTCSCCHHHHHHHC----CS-EEETTTCSSSCCCHHHHHHHHHH-CC
T ss_pred CHHHHHHHHHHHHHCCCeEEEecCCcc----ccccCHHHHHHHHHcC----CC-EEEEccCCCCCCCHHHHHHHHHc-CC
Confidence 345678889999999999999997321 0111122344444422 22 3789754 1333333333221 44
Q ss_pred ee-ccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCC-CCcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHH
Q 003372 289 YL-DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAY-ASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVA 366 (825)
Q Consensus 289 yl-d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~-~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~ 366 (825)
++ .+.. .+.. ..+ ...++++++.+..++++++||+. .++. +..+ .....+.. +++ ..++.. .+
T Consensus 242 ~vl~~~~-~g~~-~~~-~~~~~~~~~~g~~d~v~lgTD~p~~~~~-~~~g--~~~~~~~~----~~~-~~ls~~----~~ 306 (386)
T 2vun_A 242 FAMEIVQ-CGNP-KIA-DYVARRAAEKGQLGRVIFGNDAPSGTGL-IPLG--ILRNMCQI----ASM-SDIDPE----VA 306 (386)
T ss_dssp CEEEEES-SSCH-HHH-HHHHHHHHHHTCGGGEEEECCBSBTTBB-CTTH--HHHHHHHH----HHH-SCCCHH----HH
T ss_pred eEEEecc-CCcc-ccc-HHHHHHHHHcCCCceeEEecCCCCCCCC-Ccch--hHHHHHHH----Hhh-cCCCHH----HH
Confidence 44 1100 0001 112 34678888888889999999963 2111 1111 11222211 122 457864 45
Q ss_pred HHHHHHhHHHHhcC
Q 003372 367 KDIFALNAAQFYKI 380 (825)
Q Consensus 367 ~~Il~~NA~rly~L 380 (825)
-+.+..|++++|++
T Consensus 307 ~~~~T~n~A~~lgl 320 (386)
T 2vun_A 307 VCMATGNSTAVYGL 320 (386)
T ss_dssp HHHHTHHHHHHHTC
T ss_pred HHHHhHHHHHHcCC
Confidence 56667899999998
No 64
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=82.51 E-value=30 Score=37.00 Aligned_cols=139 Identities=16% Similarity=0.081 Sum_probs=72.3
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeee
Q 003372 211 LIDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (825)
Q Consensus 211 l~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyl 290 (825)
+.+..+..+.+.|.++|+++.+|.... ..+...++. ..+ .+.|+.+-...++..++.. ++++
T Consensus 204 ~~~e~l~~~~~~A~~~g~~v~~H~~~~-----------~~i~~~~~~--g~~---~i~H~~~~~~~~~~~~~~~--g~~~ 265 (403)
T 3gnh_A 204 LTYEEMKAVVDEAHMAGIKVAAHAHGA-----------SGIREAVRA--GVD---TIEHASLVDDEGIKLAVQK--GAYF 265 (403)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECSH-----------HHHHHHHHT--TCS---EEEECTTCCHHHHHHHHHH--TCEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHh--CCC---EEecCCcCCHHHHHHHHHC--CCEE
Confidence 444466778899999999999998421 124445552 222 4567754333333334332 4554
Q ss_pred ccccccCc----------ccH------HH----HHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHh
Q 003372 291 DFGLAIPK----------LSV------QG----MISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRD 350 (825)
Q Consensus 291 d~s~~~~~----------~~~------~g----~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~ 350 (825)
.+...... ... .+ ....++.+++.+. ++.+|||+...|.... ...++ .
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~v~~gTD~~~~~~~~~--~~e~~-----~--- 333 (403)
T 3gnh_A 266 SMDIYNTDYTQAEGKKNGVLEDNLRKDRDIGELQRENFRKALKAGV--KMVYGTDAGIYPHGDN--AKQFA-----V--- 333 (403)
T ss_dssp ECCCSTHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--EEECCCCBTTBCTTCG--GGHHH-----H---
T ss_pred EeeechhhhhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--eEEEecCCCCCCCCch--HHHHH-----H---
Confidence 43321100 000 00 1123556666443 8999999755443211 11111 1
Q ss_pred hhcCCCCChHHHHHHHHHHHHHhHHHHhcCCCCc
Q 003372 351 TCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (825)
Q Consensus 351 ~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~~~~ 384 (825)
+++ ..++.. .+=+..-.|++++++++...
T Consensus 334 ~~~-~gl~~~----~al~~aT~~~A~~lg~~~~~ 362 (403)
T 3gnh_A 334 MVR-YGATPL----QAIQSATLTAAEALGRSKDV 362 (403)
T ss_dssp HHH-TTCCHH----HHHHHTTHHHHHHHTCTTTS
T ss_pred HHH-cCCCHH----HHHHHHHHHHHHHhCCCCCc
Confidence 122 257764 33445568888999987544
No 65
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=82.38 E-value=5.1 Score=43.68 Aligned_cols=24 Identities=25% Similarity=0.340 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCC
Q 003372 213 DYIFISSLEVAQFLDLPLQIHTGF 236 (825)
Q Consensus 213 d~~l~~l~e~~~e~glpvq~H~G~ 236 (825)
+..+..+++.+.++|+|+.+|...
T Consensus 154 ~~~l~~~~~~a~~~g~~v~~H~~~ 177 (426)
T 2z00_A 154 AGVLAAGLLMAAPLGLPVAVHAED 177 (426)
T ss_dssp HHHHHHHHHHHGGGTCCEEECCCC
T ss_pred HHHHHHHHHHHHhhCCEEEEeCCC
Confidence 345677789999999999999863
No 66
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=80.83 E-value=5.9 Score=43.81 Aligned_cols=166 Identities=12% Similarity=0.122 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCCC--------------CCCC-CCCCChh-----chHHHHhhcCCCCcEEEEeCCCC
Q 003372 213 DYIFISSLEVAQFLDLPLQIHTGFGD--------------KDLD-LRLSNPL-----HLRAILEDKRFSKCRFVLLHASY 272 (825)
Q Consensus 213 d~~l~~l~e~~~e~glpvq~H~G~gd--------------~~~~-~~~~~P~-----~L~~l~~~~~~P~l~ivl~H~g~ 272 (825)
+..+..+++.+.++|+|+.+|..... .+.. ...+.|. .+..++.-.+.-+.++.+.|.+.
T Consensus 168 ~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~~i~H~s~ 247 (448)
T 3hm7_A 168 DETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPIHICHVSS 247 (448)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 34566778889999999999985310 0000 0001121 12222221112367899999876
Q ss_pred chHHHHHHHHHhC-CeeeeccccccCcccH------------------HHHHHHHHHHHHHCCCCcEEEecCCCCCcchh
Q 003372 273 PFSKEASYLAYVY-PQVYLDFGLAIPKLSV------------------QGMISSIKELLELAPTKKVMFSTDAYASPETY 333 (825)
Q Consensus 273 p~~~e~~~la~~~-pNVyld~s~~~~~~~~------------------~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~ 333 (825)
....+....+... -+|++++......... ..-...+.+.+..+.. .+++||..++....
T Consensus 248 ~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~~--~~i~tD~~p~~~~~ 325 (448)
T 3hm7_A 248 RKVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEI--DLISSDHSPSLPQM 325 (448)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHHHTCC--CEECCCBCCCCGGG
T ss_pred HHHHHHHHHHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHhcCCc--cEEEeCCCCCCHHH
Confidence 5544444444433 3677776542110000 0112344445544433 56899954333100
Q ss_pred -----hh----hHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCCCCc
Q 003372 334 -----FL----GAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (825)
Q Consensus 334 -----~~----~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~~~~ 384 (825)
+. +....-..+..++...+..+.++.. .+-..+..|++++|+++...
T Consensus 326 k~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~----~~~~~~t~~~A~~~g~~~~~ 381 (448)
T 3hm7_A 326 KTGKTIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLT----QIVQLLSTEPAKRFGLYPQK 381 (448)
T ss_dssp GCCSSTTTSCCCBCCTTTHHHHHHHHTTTTTCCCHH----HHHHHHTHHHHHHHTCTTTS
T ss_pred cccCCHhhCCCCCccHHHHHHHHHHHHHhcCCcCHH----HHHHHHhHHHHHHcCCCCCC
Confidence 00 0000001233345556667889974 45667789999999995443
No 67
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=71.68 E-value=13 Score=40.67 Aligned_cols=162 Identities=12% Similarity=0.065 Sum_probs=82.4
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCCCC---CC--------CC-CCCChh-----chHHHHhhcCCCCcEEEEeCCCCchH
Q 003372 213 DYIFISSLEVAQFLDLPLQIHTGFGDK---DL--------DL-RLSNPL-----HLRAILEDKRFSKCRFVLLHASYPFS 275 (825)
Q Consensus 213 d~~l~~l~e~~~e~glpvq~H~G~gd~---~~--------~~-~~~~P~-----~L~~l~~~~~~P~l~ivl~H~g~p~~ 275 (825)
+..+..+++.+.++|+|+.+|....+. +. .. ..+.|. .+...+.--+..+.++.+.|.+.+..
T Consensus 158 ~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i~H~s~~~~ 237 (428)
T 3mpg_A 158 ASMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVCHVSTKGS 237 (428)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCCCGGGCTTCSEETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCChhHhhhHHhhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHH
Confidence 345677889999999999999864210 00 00 011221 12121111123568899999976544
Q ss_pred HHHHHHHHhC-Ceeeeccccc------------------cCcc-cHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchh--
Q 003372 276 KEASYLAYVY-PQVYLDFGLA------------------IPKL-SVQGMISSIKELLELAPTKKVMFSTDAYASPETY-- 333 (825)
Q Consensus 276 ~e~~~la~~~-pNVyld~s~~------------------~~~~-~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~-- 333 (825)
.+....+... -+|++++... .|.. .... ...+.+.+..+..+ +.+||..+++...
T Consensus 238 ~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~-~~~l~~~l~~G~i~--~i~tDh~p~~~~~k~ 314 (428)
T 3mpg_A 238 VRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKED-HEALIEGLLDGTID--MIATDHAPHTAEEKA 314 (428)
T ss_dssp HHHHHHHHHTTCCEEECBCHHHHHCCGGGCCSSCGGGCCSSCCCCHHH-HHHHHHHHHHTSSC--CBCCCBCCCCTTGGG
T ss_pred HHHHHHHHhcCCCEEEEEchHHhEECHHHHhCCCCeEEEeCCCCCHHH-HHHHHHHHhCCCCc--EEEcCCCCCCHHHcc
Confidence 4444444332 2455544321 0111 1122 23455555555444 6899954432100
Q ss_pred ---h---hhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCC
Q 003372 334 ---F---LGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 334 ---~---~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~ 381 (825)
+ .+.......+..++..++..+.++.. .+-..+..|++++|+++
T Consensus 315 ~~~~~~p~g~~g~e~~~~~~~~~~~~~~~~~~~----~~~~~~t~~~a~~~g~~ 364 (428)
T 3mpg_A 315 QGIERAPFGITGFETAFPLLYTNLVKKGIITLE----QLIQFLTEKPADTFGLE 364 (428)
T ss_dssp SCTTTSCSCCCCTTTHHHHHHHHTTTTTSSCHH----HHHHTTTHHHHHHHTCS
T ss_pred cCHhhCCCCceehhhHHHHHHHHHHHcCCCCHH----HHHHHHhHHHHHHhCCC
Confidence 0 00000001233445566777888874 34455568999999996
No 68
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=71.62 E-value=8.3 Score=42.40 Aligned_cols=163 Identities=11% Similarity=0.025 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCCCC---CC-C--------CCCCChh-----chHHHHhhcCCCCcEEEEeCCCCchH
Q 003372 213 DYIFISSLEVAQFLDLPLQIHTGFGDK---DL-D--------LRLSNPL-----HLRAILEDKRFSKCRFVLLHASYPFS 275 (825)
Q Consensus 213 d~~l~~l~e~~~e~glpvq~H~G~gd~---~~-~--------~~~~~P~-----~L~~l~~~~~~P~l~ivl~H~g~p~~ 275 (825)
+..+..+++.+.++|+|+.+|....+. +. . ...+.|. .+...+.-.+..++++.+.|.+.+..
T Consensus 157 ~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~s~~~~ 236 (424)
T 3gri_A 157 ASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKES 236 (424)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCCCGGGCTTCCEESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhhhhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHH
Confidence 445677889999999999999864310 00 0 0011221 11111111134578999999976655
Q ss_pred HHHHHHHHhC-Ceeeecccccc------------------CcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchh---
Q 003372 276 KEASYLAYVY-PQVYLDFGLAI------------------PKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETY--- 333 (825)
Q Consensus 276 ~e~~~la~~~-pNVyld~s~~~------------------~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~--- 333 (825)
.+....++.. -+|+.++.... |......-...+.+.+..+..+ +++||.-++....
T Consensus 237 ~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~--~igtDhap~~~~~k~~ 314 (424)
T 3gri_A 237 VRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTID--CIATDHAPHARDEKAQ 314 (424)
T ss_dssp HHHHHHHHHTTCCEEEEECHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSC--EECCCBCCCCHHHHTS
T ss_pred HHHHHHHHHcCCCEEEEecHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCce--EEEcCCCCCCHHHccC
Confidence 5555555433 25655543310 1110011123455555544333 6899953332100
Q ss_pred -----hhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCC
Q 003372 334 -----FLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 334 -----~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~ 381 (825)
+.+....-..+..++..++..+.++.. .+-..+..|++++|+++
T Consensus 315 ~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~----~~~~~~t~~~a~~~g~~ 363 (424)
T 3gri_A 315 PMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQ----QLVDYLTIKPCETFNLE 363 (424)
T ss_dssp CTTTSCCCCCCTTTHHHHHHHHHTTTSSCCHH----HHHHHHTHHHHHHTTCS
T ss_pred CHhHCCCCCccccccHHHHHHHHHHcCCCCHH----HHHHHHhHHHHHHhCCC
Confidence 000000001233345566777889975 34445568899999983
No 69
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=69.10 E-value=21 Score=39.98 Aligned_cols=162 Identities=17% Similarity=0.207 Sum_probs=80.3
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCCC--------------CCCC-CCCCChh-----chHHHHhhcCCCCcEEEEeCCCC
Q 003372 213 DYIFISSLEVAQFLDLPLQIHTGFGD--------------KDLD-LRLSNPL-----HLRAILEDKRFSKCRFVLLHASY 272 (825)
Q Consensus 213 d~~l~~l~e~~~e~glpvq~H~G~gd--------------~~~~-~~~~~P~-----~L~~l~~~~~~P~l~ivl~H~g~ 272 (825)
+..+..+++.+.++|+++.+|....+ .+.. ...+.|. .+..++.-.+.-+.++.+.|.+.
T Consensus 186 ~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~~g~~lhi~Hvst 265 (473)
T 3e74_A 186 DWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSS 265 (473)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECSCCS
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCC
Confidence 34567778888899999999975310 0000 0012221 12222221112358999999876
Q ss_pred chHHHHHHHHHhC-Ceeeeccccc------------------cCcc-cHHHHHHHHHHHHHHCCCCcEEEecCCCCCcch
Q 003372 273 PFSKEASYLAYVY-PQVYLDFGLA------------------IPKL-SVQGMISSIKELLELAPTKKVMFSTDAYASPET 332 (825)
Q Consensus 273 p~~~e~~~la~~~-pNVyld~s~~------------------~~~~-~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~ 332 (825)
....+....++.. .+|+.+++.. .|.. +... ...+.+.++.+ ....++||..++...
T Consensus 266 ~~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~-~~~L~~~l~~G--~~~~i~tDh~p~~~~ 342 (473)
T 3e74_A 266 PEGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLEN-QKGMWEKLFNG--EIDCLVSDHSPCPPE 342 (473)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHH-HHHHHHHHHTT--CCCEECCCBCCCCTT
T ss_pred HHHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHH-HHHHHHHHhCC--CCcEEEeCCCCCCHH
Confidence 5444444444332 3676666441 1111 1111 23444444433 234699996544311
Q ss_pred h--------hhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCC
Q 003372 333 Y--------FLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 333 ~--------~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~ 381 (825)
. +.+....-..+..++.+.+..+.++.. .+-..+..|++++|+++
T Consensus 343 ~k~~~f~~~~~G~~g~e~~l~~~~~~~~~~~~~~~~----~~~~~~t~~~a~~~g~~ 395 (473)
T 3e74_A 343 MKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLP----MFGKLMATNAADIFGLQ 395 (473)
T ss_dssp TTCSCTTTSCCCBCCGGGHHHHHHHHHTTTTCCCHH----HHHHHHTHHHHHHTTCT
T ss_pred HcccChhhcCCCcccHHhHHHHHHHHHHHcCCCCHH----HHHHHHhHHHHHHhCCC
Confidence 0 000000011222334456677889975 34445568888999996
No 70
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=66.02 E-value=51 Score=38.20 Aligned_cols=136 Identities=14% Similarity=-0.006 Sum_probs=74.5
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeec
Q 003372 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (825)
Q Consensus 212 ~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld 291 (825)
.+..+...++.+.++|+||..|.... ....+..+.+ . ++.. .|+.... .++...... .+|+.
T Consensus 200 ~d~~l~~~l~~A~~~g~pV~~Ha~~~---------~~~~L~~~~~--a--Gv~~--~H~~~~~-eea~e~l~~--G~~i~ 261 (608)
T 3nqb_A 200 RDPRMSGIVQAGLAAEKLVCGHARGL---------KNADLNAFMA--A--GVSS--DHELVSG-EDLMAKLRA--GLTIE 261 (608)
T ss_dssp TCHHHHHHHHHHHHHTCEEEECCTTC---------CHHHHHHHHH--T--TCCE--ECCCCSH-HHHHHHHHT--TCEEE
T ss_pred CcHHHHHHHHHHHHcCCEEEEcCCCC---------CHHHHHHHHH--c--CCCe--eeccCCH-HHHHHHHHC--CCEEE
Confidence 44567778899999999999997521 2233555555 2 2222 6875443 444444432 56665
Q ss_pred cccccCcccHHHHHHHHHHHHH--HCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHH
Q 003372 292 FGLAIPKLSVQGMISSIKELLE--LAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDI 369 (825)
Q Consensus 292 ~s~~~~~~~~~g~~~~l~~~le--~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~I 369 (825)
+... .. + . ...+..++. ..+..+++++||+. .|...+ .... +...+...++. .++.. .+-..
T Consensus 262 i~gs-~~--~-~-~~~l~~~i~~~~~~g~~v~lgTD~~-~p~~~~-~~g~----l~~~v~~~~~~-Gls~~----eal~~ 325 (608)
T 3nqb_A 262 LRGS-HD--H-L-LPEFVAALNTLGHLPQTVTLCTDDV-FPDDLL-QGGG----LDDVVRRLVRY-GLKPE----WALRA 325 (608)
T ss_dssp EESS-SG--G-G-HHHHHHHHHHHTSCCTTEEEECBSC-CHHHHH-HTCS----HHHHHHHHHHT-TCCHH----HHHHH
T ss_pred Eecc-cc--c-c-HHHHHHHHHhHhhcCceEEEecCCC-CCcchh-hhcc----hHHHHHHHHHc-CCCHH----HHHHH
Confidence 5421 11 1 1 123334444 44669999999942 242111 1001 11222333333 57763 46667
Q ss_pred HHHhHHHHhcCC
Q 003372 370 FALNAAQFYKIN 381 (825)
Q Consensus 370 l~~NA~rly~L~ 381 (825)
...|++++|+++
T Consensus 326 aT~n~A~~lgl~ 337 (608)
T 3nqb_A 326 ATLNAAQRLGRS 337 (608)
T ss_dssp HTHHHHHHHTCT
T ss_pred HHHHHHHHcCCC
Confidence 778999999994
No 71
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=63.62 E-value=19 Score=39.36 Aligned_cols=159 Identities=18% Similarity=0.122 Sum_probs=76.0
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCC----CCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCe
Q 003372 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQ 287 (825)
Q Consensus 212 ~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~----~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pN 287 (825)
....+..+++.+.++|+|+.+|......... ..-..+ +..+.+. ...+-+.++.|+.+....++..++.. +
T Consensus 198 ~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~~~~~~~~~~~~~--g 272 (447)
T 4f0r_A 198 SDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRP--LARLQRL-GLLSPRLVAAHMVHLNDAEVELAARH--G 272 (447)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHH-TCCSTTEEEEECCSCCHHHHHHHHHH--T
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCH--HHHHHHc-CCCCCCcEEEeccCCCHHHHHHHHHc--C
Confidence 3445777889999999999999964310000 000112 1112222 34566788899865444444555543 3
Q ss_pred eeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhh--cCCCCChHHHHHH
Q 003372 288 VYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEV 365 (825)
Q Consensus 288 Vyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v--~~g~l~~~~a~~~ 365 (825)
+++......+.....+. ..++.+++.+ -++.+|||+...+.. ......++.. ..+.... ....++.. .
T Consensus 273 ~~~~~~p~~~~~~~~~~-~~~~~~~~~G--v~v~lgTD~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~l~~~----~ 342 (447)
T 4f0r_A 273 LSTAHNPASNMKLASGI-SPVSKLMDAG--VAVGIGTDGAASNNK-LDMLAETRLA--ALLAKVGTLDPTSVPAA----A 342 (447)
T ss_dssp CEEEECHHHHHHTTCCC-CCHHHHHHTT--CEEEECCCCGGGTCC-CCHHHHHHHH--HHHHHHHHTCTTSSCHH----H
T ss_pred CEEEECchhhhhcCCCC-CcHHHHHHCC--CcEEEeCCCCcCCCC-CCHHHHHHHH--HHHhhhhccCCCCCCHH----H
Confidence 33332211000000011 1234445433 278899995432110 0111111111 1112111 23467764 3
Q ss_pred HHHHHHHhHHHHhcCCCCcc
Q 003372 366 AKDIFALNAAQFYKINLGVK 385 (825)
Q Consensus 366 ~~~Il~~NA~rly~L~~~~~ 385 (825)
+-..+-.|++++++++....
T Consensus 343 al~~~T~n~A~~lg~~~~~G 362 (447)
T 4f0r_A 343 AIRMATLNGARALGIADKVG 362 (447)
T ss_dssp HHHHHTHHHHHHTTCTTTSS
T ss_pred HHHHHHHHHHHHhCCCCCcc
Confidence 44455688999999875443
No 72
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=63.58 E-value=43 Score=35.35 Aligned_cols=136 Identities=17% Similarity=0.192 Sum_probs=68.9
Q ss_pred HHHHHHHHhh-CCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCC--c---------hHHHHHHHHH
Q 003372 216 FISSLEVAQF-LDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASY--P---------FSKEASYLAY 283 (825)
Q Consensus 216 l~~l~e~~~e-~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~--p---------~~~e~~~la~ 283 (825)
+..+++.+.+ +|+||.+|.+.++. ....+...++ + . . ++.|+.. + ...+....+.
T Consensus 170 ~~~~~~~a~~~~g~~v~~H~~~~~~-------~~~~~~~~~~--~-g--~-~~~H~~~~~~~~~~~~s~~~~~~~~~~~~ 236 (379)
T 2ics_A 170 LELAKQIQQENQEIPLMVHIGSAPP-------HLDEILALME--K-G--D-VLTHCFNGKENGILDQATDKIKDFAWQAY 236 (379)
T ss_dssp HHHHHHHHHTTTTCCEEEEECSSSS-------CHHHHHHHCC--T-T--C-EEESTTCCSTTSSEETTTTEECHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEeCCCCcc-------hHHHHHHHhh--c-C--C-eeeeccCCCccchhhccCHHHHHHHHHHH
Confidence 4456788899 99999999974321 1112223333 2 1 2 4567621 1 0002222222
Q ss_pred hCCeeeeccccccCcccHHHHHHHHHHHHHHC-CCCcEEEecCCCCCcchhhhh-HHHHHHHHHHHHHhhhcCCCCChHH
Q 003372 284 VYPQVYLDFGLAIPKLSVQGMISSIKELLELA-PTKKVMFSTDAYASPETYFLG-AKRAREVVFSVLRDTCIDEDLSVGE 361 (825)
Q Consensus 284 ~~pNVyld~s~~~~~~~~~g~~~~l~~~le~~-~~~kilfgSD~~~~P~~~~~~-~~~~r~~l~~~l~~~v~~g~l~~~~ 361 (825)
..+++++++...... + ...++++++.+ +.+ +++||+. |...+.. ...+...+ ...++ ..++..
T Consensus 237 -~~g~~~~~~p~~~~~---~-~~~~~~~~~~G~~~~--~l~TD~~--~~~~~~~~~~~~~~~l----~~~~~-~~ls~~- 301 (379)
T 2ics_A 237 -NKGVVFDIGHGTDSF---N-FHVAETALREGMKAA--SISTDIY--IRNRENGPVYDLATTM----EKLRV-VGYDWP- 301 (379)
T ss_dssp -HTTCEEECCCTTTSC---C-HHHHHHHHHTTCCCS--BCCCCBC--HHHHHSSSCCCHHHHH----HHHHH-HTCCHH-
T ss_pred -HcCCEEEecCCCCCc---C-HHHHHHHHHcCCCcc--eEeccCc--ccCCCCCcHhHHHHHH----HHHHH-cCCCHH-
Confidence 236788765322211 2 13466677764 555 8999953 1100000 00111222 22222 247864
Q ss_pred HHHHHHHHHHHhHHHHhcCCC
Q 003372 362 AIEVAKDIFALNAAQFYKINL 382 (825)
Q Consensus 362 a~~~~~~Il~~NA~rly~L~~ 382 (825)
.+-+.+..|++|+|+++.
T Consensus 302 ---~~~~~~T~n~A~~lgl~~ 319 (379)
T 2ics_A 302 ---EIIEKVTKAPAENFHLTQ 319 (379)
T ss_dssp ---HHHHTTTHHHHHHTTCTT
T ss_pred ---HHHHHHHHHHHHHhCCCC
Confidence 466677899999999974
No 73
>1nxi_A Conserved hypothetical protein VC0424; structural genomics, AB sandwich, COG 3076, ATCC NO. 51394D, NESG target OP3, PSI; NMR {Vibrio cholerae} SCOP: d.58.47.1
Probab=58.48 E-value=22 Score=32.57 Aligned_cols=91 Identities=16% Similarity=0.120 Sum_probs=63.2
Q ss_pred HHHHHHHHHHhcCceEEEeeeeEEEEEeecccCCCCCCccCCCCCcCcCCccCCchHHHHHHHHHHHhCCCCeeeee---
Q 003372 510 LRKVSRLLKEEFNLVLNAGFEIEFYLLKSVLREGKEEWVPIDFTPYCSTAAYDAVSPVFQEVLADLHSLNISVEQLH--- 586 (825)
Q Consensus 510 L~~~~~~~~~~~g~~~~~g~E~EF~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~h--- 586 (825)
=+++++.+++ -|..+..-.++||++.=+. .+-++.+...+.+.|..|+..-
T Consensus 21 n~~Vl~~L~e-~Gddl~~~r~IEH~~~F~d-------------------------e~~~e~~a~~~~~~Gy~v~~~~~~e 74 (132)
T 1nxi_A 21 TRDIIQALLE-DGSDPDALYEIEHHLFAED-------------------------FDKLEKAAVEAFKMGFEVLEAEETE 74 (132)
T ss_dssp HHHHHHHHHH-HTCCTTSCEEEEEEEEESC-------------------------HHHHHHHHHHHHHHTCCCBCCCCBC
T ss_pred HHHHHHHHHh-CCCCcCCCeEEEEEEEeCC-------------------------HHHHHHHHHHHHHCCCEEEeccccc
Confidence 3566777774 5999999999999997541 2455667777788999886322
Q ss_pred cCCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHCCCe
Q 003372 587 AEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLL 627 (825)
Q Consensus 587 ~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~i~~iA~~~Gl~ 627 (825)
.|.|-..|++.+.....+...+-.-...++++ +|+++|-.
T Consensus 75 ~e~g~~~~~~~i~~~~~l~~~~I~~~~~~L~~-lA~~~~G~ 114 (132)
T 1nxi_A 75 DEDGNKLLCFDATMQSALDAKLIDEQVEKLVN-LAEKFDII 114 (132)
T ss_dssp CSSCSSBEEEEEEEEECSCHHHHHHHHHHHHH-HHHHHTCE
T ss_pred CCCCceeEEEEEEEeccCCHHHHHHHHHHHHH-HHHHhCcE
Confidence 23333579999988877776655555555555 78777653
No 74
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=53.76 E-value=88 Score=34.67 Aligned_cols=159 Identities=16% Similarity=0.130 Sum_probs=74.3
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCC----CC--CCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhC
Q 003372 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLD----LR--LSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVY 285 (825)
Q Consensus 212 ~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~----~~--~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~ 285 (825)
.+..+..+.+.|.++|+++++|.+....... .. ...| + +.+.+-.+.+-+.++.|+-+--..+...++..-
T Consensus 241 s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~~~~~~~--~-~~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g 317 (476)
T 4aql_A 241 SETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNY--T-SVYDKNNLLTNKTVMAHGCYLSAEELNVFHERG 317 (476)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESCSHHHHHHHHHHCTTSSSH--H-HHHHTTTCCSTTEEEEECTTCCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCceEEEecCCHHHHHHHHHHhCCCCCH--H-HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcC
Confidence 3446778889999999999999975311000 00 0122 1 222211233457788998655445555555432
Q ss_pred CeeeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHH--HHHHHh-hhcCCCCChHHH
Q 003372 286 PQVYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVV--FSVLRD-TCIDEDLSVGEA 362 (825)
Q Consensus 286 pNVyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l--~~~l~~-~v~~g~l~~~~a 362 (825)
-.|-..+.. +.....|+ ..++.+++.+ -++.+|||+....... ....+|... .+.+.. ......++..
T Consensus 318 ~~v~~~P~s--n~~l~~g~-~p~~~~~~~G--v~v~lGtD~~~~~~~~--~~~~~~~a~~~~~~~~~~~~~~~~l~~~-- 388 (476)
T 4aql_A 318 ASIAHCPNS--NLSLSSGF-LNVLEVLKHE--VKIGLGTDVAGGYSYS--MLDAIRRAVMVSNILLINKVNEKSLTLK-- 388 (476)
T ss_dssp CEEEECHHH--HHHTTCCC-CCHHHHHHTT--CEEEECCCTTTSSCCC--HHHHHHHHHHHHHHHHHTTSSSSCCCHH--
T ss_pred CEEEECchh--hhhhCcch-HHHHHHHHCC--CcEEEeCCCCCCCCCC--HHHHHHHHHHHHhhhhcccCCCCcCCHH--
Confidence 222111110 00000010 1234445433 3778999964321111 111222221 111111 1123467764
Q ss_pred HHHHHHHHHHhHHHHhcCCCCc
Q 003372 363 IEVAKDIFALNAAQFYKINLGV 384 (825)
Q Consensus 363 ~~~~~~Il~~NA~rly~L~~~~ 384 (825)
+..++. -.|+++.++++...
T Consensus 389 -~al~~a-T~~~A~~lgl~~~~ 408 (476)
T 4aql_A 389 -EVFRLA-TLGGSQALGLDGEI 408 (476)
T ss_dssp -HHHHHH-THHHHHHTTCTTTS
T ss_pred -HHHHHH-HHHHHHHhCCCCCc
Confidence 345444 46777888886543
No 75
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=52.97 E-value=1.1e+02 Score=33.69 Aligned_cols=164 Identities=15% Similarity=0.100 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCC--------------CCCCCC-CCCChh-----chHHHHhhcCCCCcEEEEeCCCC
Q 003372 213 DYIFISSLEVAQFLDLPLQIHTGFG--------------DKDLDL-RLSNPL-----HLRAILEDKRFSKCRFVLLHASY 272 (825)
Q Consensus 213 d~~l~~l~e~~~e~glpvq~H~G~g--------------d~~~~~-~~~~P~-----~L~~l~~~~~~P~l~ivl~H~g~ 272 (825)
+..+..+++.+.++|+++.+|.-.. ..+... ..+.|. .+...+.-.+..+.++.+.|.+.
T Consensus 163 ~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi~H~s~ 242 (461)
T 3sfw_A 163 DETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYVVHVSC 242 (461)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEECSCCS
T ss_pred HHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEecCc
Confidence 3355667888889999999996421 000000 011221 12222221123578999999876
Q ss_pred chHHHHHHHHHhC-Ceeeeccccc---------------------cCcc-cHHHHHHHHHHHHHHCCCCcEEEecCCCCC
Q 003372 273 PFSKEASYLAYVY-PQVYLDFGLA---------------------IPKL-SVQGMISSIKELLELAPTKKVMFSTDAYAS 329 (825)
Q Consensus 273 p~~~e~~~la~~~-pNVyld~s~~---------------------~~~~-~~~g~~~~l~~~le~~~~~kilfgSD~~~~ 329 (825)
.-..+....++.. .+|+.++... .|.. +... ...+.+.+..+ ...+++||..++
T Consensus 243 ~~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~-~~aL~~~l~~G--~~~~i~sD~~p~ 319 (461)
T 3sfw_A 243 ADAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWN-QDVLWSALKNG--ILQTVGSDHCPF 319 (461)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHH-HHHHHHHHHTT--SSCEECCCBCCC
T ss_pred HHHHHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHH-HHHHHHHHhcC--CceEEECCCCCC
Confidence 5444444444332 3565554321 0111 1111 23444444433 335799996544
Q ss_pred c-chh-------hh----hHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCCCC
Q 003372 330 P-ETY-------FL----GAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (825)
Q Consensus 330 P-~~~-------~~----~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~~~ 383 (825)
. ... +. +....-..+..++...+..+.++.. .+-..+..|++++++++..
T Consensus 320 ~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~----~~~~~~t~~~a~~~g~~~~ 381 (461)
T 3sfw_A 320 NFSGQKELGRRDFTKIPNGGPIIEDRMTILFSEGVRKGKISLN----QFVDITSTKVAKLFGMFPQ 381 (461)
T ss_dssp CTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHHTTTTTSSCHH----HHHHHHTHHHHHHHTCTTT
T ss_pred CchhhhhcccCCHhhCCCCCccHHHHHHHHHHHHHHcCCCCHH----HHHHHHhHHHHHHcCCCCC
Confidence 3 100 00 0000001233445567777889974 3455566889999999543
No 76
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=50.77 E-value=1.6e+02 Score=31.37 Aligned_cols=138 Identities=10% Similarity=0.054 Sum_probs=69.6
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeec
Q 003372 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLD 291 (825)
Q Consensus 212 ~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld 291 (825)
.+..+..+++.|.++|+++.+|... + .-+..+++.+ . -.+.|+..-....+..++.. ++++.
T Consensus 214 ~~~~l~~~~~~A~~~g~~v~~H~~~-~----------~~i~~~~~~g--~---~~i~H~~~~~~~~i~~l~~~--gv~v~ 275 (418)
T 2qs8_A 214 TQEEVDAVVSAAKDYGMWVAVHAHG-A----------EGMKRAIKAG--V---DSIEHGTFMDLEAMDLMIEN--GTYYV 275 (418)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECS-H----------HHHHHHHHHT--C---SEEEECTTCCHHHHHHHHHH--TCEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECC-H----------HHHHHHHHcC--C---CEEEECCCCCHHHHHHHHHC--CCEEe
Confidence 3445677788899999999999852 1 1234444421 1 24577754333333333322 34443
Q ss_pred ccc-------------ccCccc--HH------HHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHh
Q 003372 292 FGL-------------AIPKLS--VQ------GMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRD 350 (825)
Q Consensus 292 ~s~-------------~~~~~~--~~------g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~ 350 (825)
+.. .++... .. .....++.+++.+. ++.+|||+...|... .+++ +..
T Consensus 276 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~v~~gTD~~~~~~~~-----~~~e-~~~---- 343 (418)
T 2qs8_A 276 PTISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGV--KIAFGTDAGVQKHGT-----NWKE-FVY---- 343 (418)
T ss_dssp CCHHHHHHHHHHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTC--CBCCCCCBTTBCTTC-----TTHH-HHH----
T ss_pred eeechHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEeCCCCcCCcch-----HHHH-HHH----
Confidence 331 011100 00 00124566676553 688999965433211 1111 111
Q ss_pred hhcCCCCChHHHHHHHHHHHHHhHHHHhcCCCCc
Q 003372 351 TCIDEDLSVGEAIEVAKDIFALNAAQFYKINLGV 384 (825)
Q Consensus 351 ~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~~~~ 384 (825)
+++. .++..+ +=+..-.|++++++++...
T Consensus 344 ~~~~-gls~~e----al~~~T~n~A~~lg~~~~~ 372 (418)
T 2qs8_A 344 MVEN-GMPAMK----AIQSATMETAKLLRIEDKL 372 (418)
T ss_dssp HHHT-TCCHHH----HHHHTTHHHHHHTTCTTTS
T ss_pred HHHc-CCCHHH----HHHHHHHHHHHHhCCCCCC
Confidence 2222 578643 3344557888999987543
No 77
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=49.80 E-value=1.1e+02 Score=33.99 Aligned_cols=58 Identities=9% Similarity=0.011 Sum_probs=33.7
Q ss_pred CcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhc-CCCCChHHHHHHHHHHHHHhHHHHhcCCC
Q 003372 318 KKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCI-DEDLSVGEAIEVAKDIFALNAAQFYKINL 382 (825)
Q Consensus 318 ~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~-~g~l~~~~a~~~~~~Il~~NA~rly~L~~ 382 (825)
...++|||+-.......++. --.+..++..++. .+.++..+ .++ .+-.|++++++++.
T Consensus 358 ~~~~~gsD~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~---~~~-~~t~~~a~~~g~~~ 416 (480)
T 3gip_A 358 PCCMVGSDGLPNDARPHPRL---WGSFTRVLGRYVREARLMTLEQ---AVA-RMTALPARVFGFAE 416 (480)
T ss_dssp TTEEECCCCCTTCSSCCTHH---HHHHHHHHHCCCCCTCSSCHHH---HHH-HHTHHHHHHHTCTT
T ss_pred CCeEEecCCcccCCCCChhh---hhhHHHHHHHHhhhcCCCCHHH---HHH-HHHHHHHHHcCCCC
Confidence 45678999644322111111 1234456677776 47799753 444 45568888889853
No 78
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=49.57 E-value=1.1e+02 Score=34.20 Aligned_cols=158 Identities=16% Similarity=0.122 Sum_probs=79.5
Q ss_pred HHHHHHHHHhhCCCcEEEeeCCCC--------------CCCC-CCCCChh-----chHHHHhhcCCCCcEEEEeCCCCch
Q 003372 215 IFISSLEVAQFLDLPLQIHTGFGD--------------KDLD-LRLSNPL-----HLRAILEDKRFSKCRFVLLHASYPF 274 (825)
Q Consensus 215 ~l~~l~e~~~e~glpvq~H~G~gd--------------~~~~-~~~~~P~-----~L~~l~~~~~~P~l~ivl~H~g~p~ 274 (825)
.+..+++.+.++|+++++|.-..+ .+.. ...+.|. .+...+.--+.-+.++.+.|.+..-
T Consensus 162 ~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~g~~lhi~HvSt~~ 241 (490)
T 3dc8_A 162 EMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMAGCPVYIVHTSCEQ 241 (490)
T ss_dssp HHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEESSCCSHH
T ss_pred HHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHH
Confidence 456677888888999999954210 0000 0012232 1111111001236899999987654
Q ss_pred HHHHHHHHHhC-Ceeeecccccc----------------------Ccc-cHHHHHHHHHHHHHHCCCCcEEEecCCCCCc
Q 003372 275 SKEASYLAYVY-PQVYLDFGLAI----------------------PKL-SVQGMISSIKELLELAPTKKVMFSTDAYASP 330 (825)
Q Consensus 275 ~~e~~~la~~~-pNVyld~s~~~----------------------~~~-~~~g~~~~l~~~le~~~~~kilfgSD~~~~P 330 (825)
..++...++.. -+|+.++.... |.. +... ...|.+.+..+..+ +++||.-++.
T Consensus 242 ~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d-~~aL~~~l~~G~id--~i~sDh~p~~ 318 (490)
T 3dc8_A 242 AHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLH-QDSLWAGLASGSLQ--VVATDHCAFT 318 (490)
T ss_dssp HHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGG-HHHHHHHHHHTSSC--CCBCCBCCCC
T ss_pred HHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHH-HHHHHHHHhcCCce--EEECCCCCCC
Confidence 44444444432 35666554310 001 0111 23455555544333 5899954433
Q ss_pred chhhhhHHH---------------HHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCCCC
Q 003372 331 ETYFLGAKR---------------AREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (825)
Q Consensus 331 ~~~~~~~~~---------------~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~~~ 383 (825)
. ..+. ....+.-++...+..+.++.. .+-..+..|++++|++...
T Consensus 319 ~----~~K~~g~~~f~~~~~G~~gle~~l~~~~~~~v~~~~l~~~----~~~~~~t~~~A~~~gl~~~ 378 (490)
T 3dc8_A 319 T----EQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVATGRITMN----EFVAVTSTNIAKILNIYPK 378 (490)
T ss_dssp H----HHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHH----HHHHHHTHHHHHHTTCTTT
T ss_pred H----HHhhccCCChhhCCCChHHHHHHHHHHHHHHHHcCCCCHH----HHHHHHHHHHHHHhCCCCC
Confidence 1 0110 001133344555778889985 3444566899999999543
No 79
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=48.49 E-value=2.4e+02 Score=30.39 Aligned_cols=157 Identities=15% Similarity=0.103 Sum_probs=73.6
Q ss_pred HHHHHHHHHHhhCCCcEEEeeCCCCCCCC----CCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeee
Q 003372 214 YIFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVY 289 (825)
Q Consensus 214 ~~l~~l~e~~~e~glpvq~H~G~gd~~~~----~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVy 289 (825)
..+..+++.|.++|+++.+|......... ..-..+ +..+.+. ...+-+.++.|+.+.-..+...++.. ++.
T Consensus 202 ~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~~~~~~~~~l~~~--g~~ 276 (451)
T 4dyk_A 202 DKLEQILVLTEELDASIQMHVHETAFEVEQAMERNGERP--LARLHRL-GLLGPRFQAVHMTQVDNDDLAMLVET--NSS 276 (451)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHT-TCCSTTEEEEECCCCCHHHHHHHHHH--TCE
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHC-CCCCCCeEEEECCCCCHHHHHHHHHc--CCE
Confidence 35677789999999999999964310000 000111 1212221 23456778899865444455555543 233
Q ss_pred eccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhh--cCCCCChHHHHHHHH
Q 003372 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVAK 367 (825)
Q Consensus 290 ld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v--~~g~l~~~~a~~~~~ 367 (825)
+......+.....++ ..++.+++.+. ++.+|||+...+. ........+.. ..+.... ....++.. +..+
T Consensus 277 v~~~p~s~~~~~~~~-~~~~~~~~~Gv--~v~lgtD~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~al~ 347 (451)
T 4dyk_A 277 VIHCPESNLKLASGF-CPVEKLWQAGV--NVAIGTDGAASNN-DLDLLGETRTA--ALLAKAVYGQATALDAH---RALR 347 (451)
T ss_dssp EEECHHHHHHTTCCC-CCHHHHHHHTC--CEEECCCCGGGSS-CCCHHHHHHHH--HHHHHHHHTCTTSSCHH---HHHH
T ss_pred EEEChhhhhhccCCc-ccHHHHHhCCC--eEEEECCCCccCC-CCCHHHHHHHH--HHHhhhhcCCCCCCCHH---HHHH
Confidence 322110000000010 12445555443 7889999543211 00111112211 1111111 23457764 3444
Q ss_pred HHHHHhHHHHhcCCCCcc
Q 003372 368 DIFALNAAQFYKINLGVK 385 (825)
Q Consensus 368 ~Il~~NA~rly~L~~~~~ 385 (825)
+ +-.|+++.++++....
T Consensus 348 ~-~T~~~A~~lg~~~~~G 364 (451)
T 4dyk_A 348 M-ATLNGARALGLERLIG 364 (451)
T ss_dssp H-HTHHHHHHHTCTTTSS
T ss_pred H-HHHHHHHHcCCCCCCc
Confidence 4 4568888999875443
No 80
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=47.81 E-value=1.3e+02 Score=32.05 Aligned_cols=25 Identities=8% Similarity=-0.039 Sum_probs=20.5
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEeeC
Q 003372 211 LIDYIFISSLEVAQFLDLPLQIHTG 235 (825)
Q Consensus 211 l~d~~l~~l~e~~~e~glpvq~H~G 235 (825)
+.+..+..+.+.|.++|+++.+|..
T Consensus 209 ~~~e~l~~~~~~A~~~g~~v~~H~~ 233 (423)
T 3feq_A 209 YSEDEIRAIVDEAEAANTYVMAHAY 233 (423)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHCCCeEEEEeC
Confidence 3444677888999999999999986
No 81
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=46.86 E-value=2.5e+02 Score=30.56 Aligned_cols=155 Identities=16% Similarity=0.102 Sum_probs=72.1
Q ss_pred HHHHHHHHHhhCCCcEEEeeCCCCCCC----CCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeee
Q 003372 215 IFISSLEVAQFLDLPLQIHTGFGDKDL----DLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (825)
Q Consensus 215 ~l~~l~e~~~e~glpvq~H~G~gd~~~----~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyl 290 (825)
.+..+.+.+.++|+++.+|...+.... ...-..| +..+.+. ...+-++++.|+.+--..++..++..--.+-.
T Consensus 210 ~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~~~~~~~~~H~~~l~~~~i~~l~~~g~~v~~ 286 (472)
T 4dzh_A 210 NFERVRMLADQLDMPVHLHTHETAQEVADSVAQYGQRP--LARLDRL-GLVNDRLIAVHMTQLTEAEIHLCAERGVSVVH 286 (472)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCH--HHHHHHH-TCCSTTEEEEECCSCCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHc-CCCCCCeEEEeccCCCHHHHHHHHHcCCEEEE
Confidence 456678889999999999986431000 0000112 2222222 23355678899865444444555543222222
Q ss_pred ccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCC-cchhhhhHHHHHHHHHHHHHhh--hcCCCCChHHHHHHHH
Q 003372 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYAS-PETYFLGAKRAREVVFSVLRDT--CIDEDLSVGEAIEVAK 367 (825)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~-P~~~~~~~~~~r~~l~~~l~~~--v~~g~l~~~~a~~~~~ 367 (825)
...... ....|+ ..++.+++.+ -++.+|||+... +... ....++... .+... .....++.. +..+
T Consensus 287 ~p~s~~--~~~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~~~--~~~~~~~a~--~~~~~~~~~~~~l~~~---~al~ 354 (472)
T 4dzh_A 287 CPESNL--KLASGF-CPACALQRAS--VNLAIGTDGCASNNDLD--MFSENRTAA--ILAKAVANDATALDAA---TTLR 354 (472)
T ss_dssp CHHHHH--HTTCCC-CCHHHHHHTT--CEEEECCCCTTSSCCCC--HHHHHHHHH--HHHHHHHTCTTSSCHH---HHHH
T ss_pred ChHHHH--hcCCCC-ccHHHHHHCC--CCEEEECCCCcCCCCCC--HHHHHHHHH--HHhhhhcCCCCcCCHH---HHHH
Confidence 111000 000010 1244455543 278899996431 1111 111122111 11111 123457764 3455
Q ss_pred HHHHHhHHHHhcCCCCcc
Q 003372 368 DIFALNAAQFYKINLGVK 385 (825)
Q Consensus 368 ~Il~~NA~rly~L~~~~~ 385 (825)
... .|+++.++++....
T Consensus 355 ~~T-~~~A~~lgl~~~~G 371 (472)
T 4dzh_A 355 AAT-LGGARALGFGDRIG 371 (472)
T ss_dssp HHT-HHHHHHTTCTTTSS
T ss_pred HHH-HHHHHHcCCCCCCc
Confidence 444 58888999875443
No 82
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=46.83 E-value=2e+02 Score=31.25 Aligned_cols=155 Identities=15% Similarity=0.083 Sum_probs=72.6
Q ss_pred HHHHHHHHHhhCCCcEEEeeCCCCCCCC----CCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeee
Q 003372 215 IFISSLEVAQFLDLPLQIHTGFGDKDLD----LRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYL 290 (825)
Q Consensus 215 ~l~~l~e~~~e~glpvq~H~G~gd~~~~----~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyl 290 (825)
.+..+++.+.++|+++.+|......... ..-..+ +..+.+. ...+-+.++.|+.+.-..++..++.. ++++
T Consensus 228 ~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--i~~~~~~-g~l~~~~~~~H~~~~~~~~~~~l~~~--g~~v 302 (468)
T 3lnp_A 228 PLKEITMLSDQLDMPVQIHLHETDFEVSESLETFNKRP--TQRLADI-GFLNERVSCVHMTQVDDGDIKILQKT--GASI 302 (468)
T ss_dssp HHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHHHSSCH--HHHHHHT-TCCSTTEEEEECCSCCHHHHHHHHHH--CCEE
T ss_pred HHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCH--HHHHHHc-CCCCCCeEEEeccCCCHHHHHHHHhc--CCEE
Confidence 4567788899999999999964310000 000111 1112221 23456788899865444444455543 3333
Q ss_pred ccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhh--cCCCCChHHHHHHHHH
Q 003372 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC--IDEDLSVGEAIEVAKD 368 (825)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v--~~g~l~~~~a~~~~~~ 368 (825)
......+.....++ ..++.+++.+ -++.+|||+...+.. .......+.. ..+.... ....++.. +..++
T Consensus 303 ~~~p~s~~~~~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~l~~~---~al~~ 373 (468)
T 3lnp_A 303 IHCPESNLKLASGF-CPIAKLSAAN--IPLAIGTDGAASNND-LDMFSETKTA--ALLAKGVSQDASAIPAI---EALTM 373 (468)
T ss_dssp EECHHHHHHTTCCC-CCHHHHHHTT--CCEEECCCCTTSSCC-CCHHHHHHHH--HHHHHHHHTCTTSSCHH---HHHHH
T ss_pred EEChhhhhhcCCCC-CCHHHHHHCC--CeEEEECCCCcCCCC-CCHHHHHHHH--HHHhhhccCCCCcCCHH---HHHHH
Confidence 22110000000010 1244555543 278899996543110 0011111111 1112211 23467764 34444
Q ss_pred HHHHhHHHHhcCCCCc
Q 003372 369 IFALNAAQFYKINLGV 384 (825)
Q Consensus 369 Il~~NA~rly~L~~~~ 384 (825)
+-.|++++++++...
T Consensus 374 -~T~~~A~~lg~~~~~ 388 (468)
T 3lnp_A 374 -ATLGGARALGIDDIT 388 (468)
T ss_dssp -HTHHHHHHTTCTTTS
T ss_pred -HHHHHHHHhCCCCCc
Confidence 446888999987544
No 83
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=45.91 E-value=1.5e+02 Score=31.57 Aligned_cols=134 Identities=13% Similarity=0.038 Sum_probs=68.0
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeecc
Q 003372 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDF 292 (825)
Q Consensus 213 d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~ 292 (825)
...+..+++.+.++|+++.+|.... .-+..+++.+ . -.+.|+.+.. .+...++.. .++++.+
T Consensus 205 ~~~l~~~~~~A~~~g~~v~~H~~~~-----------~~i~~~~~~g----~-~~i~H~~~~~-~~~i~~~~~-~g~~v~~ 266 (408)
T 3be7_A 205 LEEMKAIVDEAHNHGMKVAAHAHGL-----------IGIKAAIKAG----V-DSVEHASFID-DETIDMAIK-NNTVLSM 266 (408)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSH-----------HHHHHHHHHT----C-SEEEECTTCC-HHHHHHHHH-TTCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCH-----------HHHHHHHHcC----C-CEEEECCCCC-HHHHHHHHH-CCCEEee
Confidence 3456677888999999999998521 1234444422 1 2467875433 333444333 2344432
Q ss_pred cccc------C----cccH----H--HH----HHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhh
Q 003372 293 GLAI------P----KLSV----Q--GM----ISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTC 352 (825)
Q Consensus 293 s~~~------~----~~~~----~--g~----~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v 352 (825)
.... . ...+ . ++ ...++.+++.+. ++++|||+.+.|.... ....+. ++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv--~~~~gTD~~~~p~~~~--~~~~~~--------~~ 334 (408)
T 3be7_A 267 DIFVSDYILGEGAKAGIREESLNKERLVGKKQRENFMNAHRRGA--IITFGTDAGIFDHGDN--AKQFAY--------MV 334 (408)
T ss_dssp CCSTHHHHHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--CEECCCCBTTBCTTCG--GGHHHH--------HH
T ss_pred eecHHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEECCCCCCCCchH--HHHHHH--------HH
Confidence 2110 0 0000 0 10 123455555442 6889999755443211 111111 22
Q ss_pred cCCCCChHHHHHHHHHHHHHhHHHHhcCC
Q 003372 353 IDEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 353 ~~g~l~~~~a~~~~~~Il~~NA~rly~L~ 381 (825)
+. .++.. .+-+.+-.|++++|+++
T Consensus 335 ~~-gls~~----~al~~~T~n~A~~lgl~ 358 (408)
T 3be7_A 335 EW-GMTPL----EAIQASTIKTATLFGIE 358 (408)
T ss_dssp HT-TCCHH----HHHHTTTHHHHHHHTCS
T ss_pred Hc-CCCHH----HHHHHHHHHHHHHhCCC
Confidence 23 57864 33445567889999987
No 84
>3ln6_A Glutathione biosynthesis bifunctional protein GSH; gamma-glutamyl cysteine ligase domain, ATP-grAsp domain, HYB enzyme; 2.95A {Streptococcus agalactiae serogroup V}
Probab=43.76 E-value=1.2e+02 Score=36.09 Aligned_cols=103 Identities=12% Similarity=0.048 Sum_probs=66.8
Q ss_pred eeecCCCCCceEEecCcC-hHHHHHHHHHHHHHHHHHHH-HHCCCeEEecc-----------------c------c----
Q 003372 584 QLHAEAGKGQFEIALGHT-VAAKAADNLIFTREVLRAVA-RKHGLLATFVP-----------------N------L---- 634 (825)
Q Consensus 584 ~~h~E~~pGQ~Ei~l~~~-~~l~aaD~~~~~r~~i~~iA-~~~Gl~AtF~p-----------------K------l---- 634 (825)
.+.+|..-.|.|+..+++ +.-++.+.+...+.++.+.+ ....+-+.=|| | +
T Consensus 54 ~i~~d~~es~lE~~Tpv~~~~~~~~~~L~~l~~~~~~~~~~~e~lw~~smp~~l~~~~i~ia~~~~~~~~~Yr~~l~~ry 133 (750)
T 3ln6_A 54 YIQTDYSEPQLELITPIAKDSQEAIRFLKAISDVAGRSINHDEYLWPLSMPPKVREEDIQIAQLEDAFEYDYRKYLEKTY 133 (750)
T ss_dssp SEEESSBSSEEEEECCCBSSHHHHHHHHHHHHHHHHHHSCTTEEECCSSSCSSCCTTTCCBCCCSCHHHHHHHHHHHHHH
T ss_pred CccchhhhhheeeeCcCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeecCCCCCCCCCCCcccCCCCCcHHHHHHHHHHh
Confidence 688899999999999997 68899999999999988886 33333222221 1 1
Q ss_pred -----cCCCCcccccCCCCC---------CCC----CcHHHHHHHHHHHHHHHHHHhhhCCCCCCccCCC
Q 003372 635 -----WQNGENVFMASDSSS---------KHG----MSSVGEKFMAGVLHHLSSILAFTAPVPNSYDRIQ 686 (825)
Q Consensus 635 -----~~~g~n~f~~~~~~~---------~~~----ls~~~~~fiaGil~h~~al~a~~~P~~nSY~Rl~ 686 (825)
-=.|.|++++.++.. ... .|...-..+-+++.+.+-++++++.++-.-.++.
T Consensus 134 g~~~q~i~G~Hvn~~~~~~~~~~l~~~~~~~~~~~~~~~~y~~l~r~~~r~~w~l~~L~gaSP~~~~~f~ 203 (750)
T 3ln6_A 134 GKLIQSISGIHYNLGLGQELLTSLFELSQADNAIDFQNQLYMKLSQNFLRYRWLLTYLYGASPVAEEDFL 203 (750)
T ss_dssp CTGGGGCCCEEEEEEECHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSSSCS
T ss_pred ChhhceeeeEEEEecCChHHHHHHhhccccchHHHHhhhHHHHHHHHHHhHHHHHHHHhhCCcccccccc
Confidence 015777777543210 000 0112224566788999999999998875534433
No 85
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=43.08 E-value=12 Score=31.29 Aligned_cols=69 Identities=7% Similarity=0.207 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHhCCCCeeeeecCCCCCceEEecCcChHHHHHHHHHHHHHHHHHHHHHCCCeEEeccc-ccC
Q 003372 566 PVFQEVLADLHSLNISVEQLHAEAGKGQFEIALGHTVAAKAADNLIFTREVLRAVARKHGLLATFVPN-LWQ 636 (825)
Q Consensus 566 ~~~~~i~~~l~~~Gi~ve~~h~E~~pGQ~Ei~l~~~~~l~aaD~~~~~r~~i~~iA~~~Gl~AtF~pK-l~~ 636 (825)
-++.++...+.+.|++|..++.....|.|.+.+.-.-+ ..+++-.++.-+++++.++|+..++.|. +|+
T Consensus 17 Gila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~~~~l~~l~~~L~~~~~~~~~~~~~~~~~if~ 86 (91)
T 1zpv_A 17 GIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--EKQDFTYLRNEFEAFGQTLNVKINIQSAAIFE 86 (91)
T ss_dssp THHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SCCCHHHHHHHHHHHHHHHTEEEEEEEGGGTC
T ss_pred CHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--CCCCHHHHHHHHHHHHHHcCCEEEEeeHHHHH
Confidence 47889999999999999988877656777766654211 0124455678889999999999998876 443
No 86
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=41.70 E-value=80 Score=35.99 Aligned_cols=34 Identities=18% Similarity=0.117 Sum_probs=23.3
Q ss_pred HHHHHhhhcCCCC-ChHHHHHHHHHHHHHhHHHHhcCCC
Q 003372 345 FSVLRDTCIDEDL-SVGEAIEVAKDIFALNAAQFYKINL 382 (825)
Q Consensus 345 ~~~l~~~v~~g~l-~~~~a~~~~~~Il~~NA~rly~L~~ 382 (825)
..++...|..+.+ +.. .+-..+-.|++++|++..
T Consensus 401 ~~ll~~~v~~~~l~~~~----~~~~~~t~~~A~~lgl~~ 435 (559)
T 2fty_A 401 PLLYDYGYLRGNLTSMM----KLVEIQCTNPAKVYGMYP 435 (559)
T ss_dssp HHHHHHTTTTTSSSCHH----HHHHHHTHHHHHHTTCTT
T ss_pred HHHHHHHHHcCCCCCHH----HHHHHHhHHHHHHhCCCC
Confidence 3345566777888 874 344556688899999853
No 87
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=40.67 E-value=3.6e+02 Score=28.67 Aligned_cols=25 Identities=12% Similarity=-0.149 Sum_probs=20.3
Q ss_pred hhhHHHHHHHHHHhhCCCcEEEeeC
Q 003372 211 LIDYIFISSLEVAQFLDLPLQIHTG 235 (825)
Q Consensus 211 l~d~~l~~l~e~~~e~glpvq~H~G 235 (825)
+.+..+..+.+.|.++|++|.+|..
T Consensus 212 ~~~e~l~~~~~~A~~~g~~v~~H~~ 236 (426)
T 2r8c_A 212 YSEDEIRAIVAEAQGRGTYVLAHAY 236 (426)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEeC
Confidence 3444577788999999999999986
No 88
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=36.55 E-value=67 Score=35.31 Aligned_cols=153 Identities=12% Similarity=0.038 Sum_probs=72.1
Q ss_pred HHHHHHHHHHhhCCCcEEEeeCCCCCCC----CCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeee
Q 003372 214 YIFISSLEVAQFLDLPLQIHTGFGDKDL----DLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVY 289 (825)
Q Consensus 214 ~~l~~l~e~~~e~glpvq~H~G~gd~~~----~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVy 289 (825)
..+..+++.|.++|+++.+|........ +..-..| +..+.+. .+.+.+.++.|+.+.-..++..++.. +++
T Consensus 240 e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~~~~l~~~--g~~ 314 (479)
T 3h4u_A 240 DLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTP--AEYAEDL-GWVGHDVWHAHCVQLDDAGIGLFART--GTG 314 (479)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CH--HHHHHHT-TCCSTTEEEEECTTCCHHHHHHHHHH--TCE
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHcCCCH--HHHHHHc-CCCCCCeEEEEecCCCHHHHHHHHHc--CCe
Confidence 3567778899999999999996531100 0001122 2222222 33456788899865544555555543 233
Q ss_pred eccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCc-chhhhhHHHHHHHHHHHHHhhh-cCCCCChHHHHHHHH
Q 003372 290 LDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASP-ETYFLGAKRAREVVFSVLRDTC-IDEDLSVGEAIEVAK 367 (825)
Q Consensus 290 ld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P-~~~~~~~~~~r~~l~~~l~~~v-~~g~l~~~~a~~~~~ 367 (825)
+...-..+.....+. ..++.+++.+ -++.+|||+.... ... .....+... .+.... ....++.. +..+
T Consensus 315 v~~~p~s~~~l~~~~-~~~~~~~~~G--v~v~lgtD~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~l~~~---~al~ 384 (479)
T 3h4u_A 315 VAHCPCSNMRLASGI-APVKKMRLAG--VPVGLGVDGSASNDGAQ--MVAEVRQAL--LLQRVGFGPDAMTAR---EALE 384 (479)
T ss_dssp EEECHHHHHHTTCCC-CCHHHHHHTT--CCEEECCCCTTSSCCCC--HHHHHHHHH--HHHHHHHCTTSCCHH---HHHH
T ss_pred EEEChhHhhhcCCCC-CCHHHHHHCC--CeEEEeCCCCccCCCcC--HHHHHHHHH--HHhcccCCCCCCCHH---HHHH
Confidence 322110000000010 1234555543 3788999965431 111 111122111 111111 12337764 3444
Q ss_pred HHHHHhHHHHhcCCC
Q 003372 368 DIFALNAAQFYKINL 382 (825)
Q Consensus 368 ~Il~~NA~rly~L~~ 382 (825)
. .-.|++++++++.
T Consensus 385 ~-~T~~~A~~lg~~~ 398 (479)
T 3h4u_A 385 I-ATLGGAKVLNRDD 398 (479)
T ss_dssp H-TTHHHHHHHTCSS
T ss_pred H-HHHHHHHHhCCCC
Confidence 4 4578888999874
No 89
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=35.97 E-value=1.6e+02 Score=32.12 Aligned_cols=25 Identities=24% Similarity=0.260 Sum_probs=20.0
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCC
Q 003372 212 IDYIFISSLEVAQFLDLPLQIHTGF 236 (825)
Q Consensus 212 ~d~~l~~l~e~~~e~glpvq~H~G~ 236 (825)
....+..+++.+.++|+|+.+|...
T Consensus 204 ~~e~l~~~~~~A~~~g~~v~~H~~~ 228 (467)
T 1xrt_A 204 DSSVMRKALELASQLGVPIMDHCED 228 (467)
T ss_dssp CHHHHHHHHHHHHHHTCEEEECCCG
T ss_pred CHHHHHHHHHHHHhcCCEEEEECCC
Confidence 3446777888899999999999854
No 90
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=33.20 E-value=1.8e+02 Score=31.97 Aligned_cols=25 Identities=8% Similarity=-0.047 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHHhhC-CCcEEEeeCC
Q 003372 212 IDYIFISSLEVAQFL-DLPLQIHTGF 236 (825)
Q Consensus 212 ~d~~l~~l~e~~~e~-glpvq~H~G~ 236 (825)
....+..+++.+.++ |+++.+|+..
T Consensus 212 ~~e~l~~~~~~a~~~~g~~v~~H~~e 237 (475)
T 2ood_A 212 SPELLKACQRLKHEHPDCWVNTHISE 237 (475)
T ss_dssp CHHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CHHHHHHHHHHHHhCCCCcEEEeeCC
Confidence 344567778889999 9999999964
No 91
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=32.45 E-value=56 Score=35.47 Aligned_cols=84 Identities=13% Similarity=0.071 Sum_probs=49.5
Q ss_pred cHHHHHHHHHHHHHhhccc-ccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhCCC----CCcCCchhh--hhHHHHHH
Q 003372 147 TLDVFIETFLKQLRSAANK-IVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGK----PVRITNKSL--IDYIFISS 219 (825)
Q Consensus 147 ~~~~~~~al~~~l~~~~~~-~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~~~----~~~~~~~~l--~d~~l~~l 219 (825)
+++++++++.+.++..... =+..+-|.|.... .+++++.+.++.+..... +..+...+. .-..+.++
T Consensus 129 ~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~------~~~e~a~~~~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~ 202 (380)
T 4gxw_A 129 PYADAQAAIVTGMRDAARDFGIGARLIPSIDRE------QDPDEAVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKA 202 (380)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETT------SCHHHHHHHHHHHHHTCCTTBCEEEEESCCTTCCGGGGHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCC------CCHHHHHHHHHHHHHhCCCCEEEEeecCCCCCCCHHHHHHH
Confidence 4777777777766654321 1445666665332 256777777666655321 111111110 01146788
Q ss_pred HHHHhhCCCcEEEeeCC
Q 003372 220 LEVAQFLDLPLQIHTGF 236 (825)
Q Consensus 220 ~e~~~e~glpvq~H~G~ 236 (825)
++.+.+.|+++.+|.|-
T Consensus 203 f~~ar~~Gl~~t~HAGE 219 (380)
T 4gxw_A 203 YRDARAAGFRTTAHAGE 219 (380)
T ss_dssp HHHHHHTTCEEEEEESC
T ss_pred HHHHHHcCCCeeeeccc
Confidence 99999999999999996
No 92
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=31.42 E-value=1.3e+02 Score=32.07 Aligned_cols=135 Identities=17% Similarity=0.139 Sum_probs=66.7
Q ss_pred HHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCeeeeccccccCcc
Q 003372 220 LEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQVYLDFGLAIPKL 299 (825)
Q Consensus 220 ~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pNVyld~s~~~~~~ 299 (825)
+..+.+.|+|+.+|+...+ .......+++ ++ ++++.+.|+..-+. .+..++..--.|-+.....+...
T Consensus 213 l~~~~~~~~~v~iHa~~~~--------~i~~~~~~~~--~~-g~~~~i~H~~~~~~-~~~~l~~~gv~v~~~P~~~~~~~ 280 (396)
T 3ooq_A 213 GEMVLRKKIPARMHAHRAD--------DILTAIRIAE--EF-GFNLVIEHGTEAYK-ISKVLAEKKIPVVVGPLLTFRTK 280 (396)
T ss_dssp HHHHHTTSSCEEEEECSHH--------HHHHHHHHHH--HH-TCCEEEEECTTGGG-GHHHHHHHTCCEEECCCSSCCCS
T ss_pred HHHHHcCCCcEEEEECchh--------HHHHHHHHHH--Hc-CCCEEEecCchHHH-HHHHHHHCCCCEEECcccccccc
Confidence 3444588999999996421 1112223333 22 45788899854332 33344443222222222111110
Q ss_pred c---HHHHHHHHHHHHHHCCCCcEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhcCCCCChHHHHHHHHHHHHHhHHH
Q 003372 300 S---VQGMISSIKELLELAPTKKVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQ 376 (825)
Q Consensus 300 ~---~~g~~~~l~~~le~~~~~kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~r 376 (825)
. ..+ ...++.+++.+ -++.+|||+...|... +...+ ++ .+ +..++.. .+-+..-.|+++
T Consensus 281 ~~~~~~~-~~~~~~l~~~G--v~v~lgtD~~~~~~~~------l~~~~-~~---~~-~~gl~~~----~al~~~T~n~A~ 342 (396)
T 3ooq_A 281 LELKDLT-METIAKLLKDG--VLIALMCDHPVIPLEF------ATVQA-AT---AM-RYGAKEE----DLLKILTVNPAK 342 (396)
T ss_dssp GGGTTCC-TTHHHHHHHTT--CCEEECCTTTTSCGGG------HHHHH-HH---GG-GGTCCHH----HHHHTTTHHHHH
T ss_pred hhHHhhh-hHHHHHHHHCC--CEEEEEcCCCccCccH------HHHHH-HH---HH-HcCCCHH----HHHHHHHHHHHH
Confidence 0 001 12455555543 4788999975554321 11111 11 12 2357764 344556689999
Q ss_pred HhcCCCCc
Q 003372 377 FYKINLGV 384 (825)
Q Consensus 377 ly~L~~~~ 384 (825)
+++++...
T Consensus 343 ~lg~~~~~ 350 (396)
T 3ooq_A 343 ILGLEDRI 350 (396)
T ss_dssp HTTCTTTS
T ss_pred HhCCCCCe
Confidence 99997544
No 93
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=28.58 E-value=1.6e+02 Score=32.59 Aligned_cols=56 Identities=11% Similarity=-0.038 Sum_probs=31.5
Q ss_pred cEEEecCCCCCcchhhhhHHHHHHHHHHHHHhhhc-CCCCChHHHHHHHHHHHHHhHHHHhcCC
Q 003372 319 KVMFSTDAYASPETYFLGAKRAREVVFSVLRDTCI-DEDLSVGEAIEVAKDIFALNAAQFYKIN 381 (825)
Q Consensus 319 kilfgSD~~~~P~~~~~~~~~~r~~l~~~l~~~v~-~g~l~~~~a~~~~~~Il~~NA~rly~L~ 381 (825)
++++|||+.++......+. -..+.+.+..++. .+.++.. +.++ .+-.|++++|+++
T Consensus 373 ~~~iGTD~~~~~~~~~~~~---~~~~~~~l~~~v~~~~~l~~~---~~l~-~~T~~~A~~lgl~ 429 (496)
T 1rk6_A 373 PTMIGSDGLPHDERPHPRL---WGTFPRVLGHYSRDLGLFPLE---TAVW-KMTGLTAAKFGLA 429 (496)
T ss_dssp TEEECCCCCTTCSSCCTHH---HHHHHHHHCCCCCCTCSSCHH---HHHH-TTTHHHHHHHTCT
T ss_pred CEEEecCCCCCCCCCCchh---hccHHHHHHHHHhhcCCCCHH---HHHH-HHHHHHHHHhCCC
Confidence 7899999743211001111 1134455666664 5678875 3444 4456778889985
No 94
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=26.24 E-value=74 Score=33.99 Aligned_cols=158 Identities=18% Similarity=0.122 Sum_probs=80.3
Q ss_pred cHHHHHHHHHHHHHhhccc-ccceeeeeecccCCCCCCCCCHHHHHHHHHHHHhCCC---CCcCCchh--hhhHHHHHHH
Q 003372 147 TLDVFIETFLKQLRSAANK-IVGLKSIAAYRSGLEINPHVTKKDAEEGLAEDLRSGK---PVRITNKS--LIDYIFISSL 220 (825)
Q Consensus 147 ~~~~~~~al~~~l~~~~~~-~vgfks~~ay~~Gl~~~~~~~~~ea~~~~~r~l~~~~---~~~~~~~~--l~d~~l~~l~ 220 (825)
+++++++++.+.++.+... -++.+-|.|....+ +++++.+.++.++.-.. +..+...+ ..-..+.+++
T Consensus 113 ~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~~------~~~~a~~~l~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~ 186 (343)
T 3rys_A 113 ALETCVNGVANALATSEEDFGVSTLLIAAFLRDM------SEDSALEVLDQLLAMHAPIAGIGLDSAEVGNPPSKFERLY 186 (343)
T ss_dssp CHHHHHHHHHHHHTTHHHHHSCEEEEEEEEETTS------CHHHHHHHHHHHHHTTCCCCEEEEESCCTTCCGGGGHHHH
T ss_pred CHHHHHHHHHHHHHHHhhcCceeEEEEEEeCCCC------CHHHHHHHHHHHHhCCCCEEEEecCCcccCCCHHHHHHHH
Confidence 4667777666666543211 14467777763322 46667766666655211 11111111 0111356788
Q ss_pred HHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCCCCch--HHHHHHHHHhC--------Ceeee
Q 003372 221 EVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHASYPF--SKEASYLAYVY--------PQVYL 290 (825)
Q Consensus 221 e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~--~~e~~~la~~~--------pNVyl 290 (825)
+.|.+.|+++.+|.|-.. .|..+.+.+.. --++ + +.|+-.-. -..+..++..- .|+++
T Consensus 187 ~~A~~~gl~~~~HagE~~--------~~~~i~~al~~-lg~~-r--IgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l 254 (343)
T 3rys_A 187 QRAAEAGLRRIAHAGEEG--------PASYITEALDV-LHVE-R--IDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRL 254 (343)
T ss_dssp HHHHHTTCEEEEEESSSS--------CHHHHHHHHHT-SCCS-E--EEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHT
T ss_pred HHHHHCCCeEEEeeCCCC--------CHHHHHHHHhc-CCcc-e--eeeeeeecCChHHHHHHHhcCCCeeEchhHHHHh
Confidence 999999999999998642 34445444431 1122 2 57873211 12334444321 25554
Q ss_pred ccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCCCCCcc
Q 003372 291 DFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDAYASPE 331 (825)
Q Consensus 291 d~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~~~~P~ 331 (825)
.. ++.. + ..-++.+++.+ =++..+||.+.+-.
T Consensus 255 ~~---~~~~---~-~hPi~~ll~~G--v~V~l~TDdp~~~~ 286 (343)
T 3rys_A 255 RA---VDKL---A-DHPLPEMLAIG--LNVCVNSDDPAYFG 286 (343)
T ss_dssp TS---SSCG---G-GCSHHHHHHTT--CCEEECCBSTTTTT
T ss_pred CC---CCCc---c-cchHHHHHHCC--CeEEEeCCCccccC
Confidence 43 1111 0 11345555544 47889999765443
No 95
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=25.73 E-value=66 Score=34.52 Aligned_cols=69 Identities=16% Similarity=0.169 Sum_probs=41.8
Q ss_pred HHHHHHHhhCCCcEEEeeCCCCCCCCCCCCChhchHHHHhhcCCCCcEEEEeCC--CCchHH------HHHHHHHhCCee
Q 003372 217 ISSLEVAQFLDLPLQIHTGFGDKDLDLRLSNPLHLRAILEDKRFSKCRFVLLHA--SYPFSK------EASYLAYVYPQV 288 (825)
Q Consensus 217 ~~l~e~~~e~glpvq~H~G~gd~~~~~~~~~P~~L~~l~~~~~~P~l~ivl~H~--g~p~~~------e~~~la~~~pNV 288 (825)
.|+++.+++.|.||.+=+|... ...-..-.+.+.. . +-+|+++|| +||-.+ .+..|...||++
T Consensus 125 ~pLL~~va~~gKPviLstGmst------l~Ei~~Ave~i~~--~-g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~l 195 (350)
T 3g8r_A 125 WPLLERIARSDKPVVASTAGAR------REDIDKVVSFMLH--R-GKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGV 195 (350)
T ss_dssp HHHHHHHHTSCSCEEEECTTCC------HHHHHHHHHHHHT--T-TCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTS
T ss_pred HHHHHHHHhhCCcEEEECCCCC------HHHHHHHHHHHHH--c-CCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCC
Confidence 3567788899999999999641 0111111222332 2 126999998 677432 234566778877
Q ss_pred eecccc
Q 003372 289 YLDFGL 294 (825)
Q Consensus 289 yld~s~ 294 (825)
-++.|.
T Consensus 196 pVG~Sd 201 (350)
T 3g8r_A 196 RIGYST 201 (350)
T ss_dssp EEEEEE
T ss_pred CEEcCC
Confidence 776653
No 96
>1v5s_A MAP/microtubule affinity-regulating kinase 3; Ka1 domain, ELKL motif, MARK3, phosphorylation, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.129.6.1
Probab=25.38 E-value=2.1e+02 Score=25.82 Aligned_cols=69 Identities=16% Similarity=0.209 Sum_probs=47.2
Q ss_pred CCccCCchHHHHHHHHHHHhCCCCeee--------eecCC---CCCceEEecCcChHH--------HHHHHHHHHHHHHH
Q 003372 558 TAAYDAVSPVFQEVLADLHSLNISVEQ--------LHAEA---GKGQFEIALGHTVAA--------KAADNLIFTREVLR 618 (825)
Q Consensus 558 ~~~~~~~~~~~~~i~~~l~~~Gi~ve~--------~h~E~---~pGQ~Ei~l~~~~~l--------~aaD~~~~~r~~i~ 618 (825)
+++.....+++.||.++|.+.||+.++ .|... ..=||||.+--.+.+ +..-+.+.+|.++.
T Consensus 33 tTSsk~P~eIm~EI~rvL~~~~i~~k~~~~y~L~C~~~~~~~~~~vkfEiEVcKvp~l~l~GI~fKRisGd~w~YK~lc~ 112 (126)
T 1v5s_A 33 QGSSGSSGDMMREIRKVLGANNCDYEQRERFLLFCVHGDGHAENLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIAS 112 (126)
T ss_dssp CCCCSSHHHHHHHHHHHHHHTTEEEEEEETTEEEEEECSSSTTTCEEEEEECCCCTTTCSCCCEEEEEESCHHHHHHHHH
T ss_pred eecCCCHHHHHHHHHHHHHHcCCcEEEECCEEEEEEECCCCCCceEEEEEEEEEecCCCceeEEEeeccCchhHHHHHHH
Confidence 344455689999999999999998886 13211 123899987644311 01114489999999
Q ss_pred HHHHHCCC
Q 003372 619 AVARKHGL 626 (825)
Q Consensus 619 ~iA~~~Gl 626 (825)
+|..+..+
T Consensus 113 ~IL~eLkL 120 (126)
T 1v5s_A 113 KIANELKL 120 (126)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHhc
Confidence 99988765
No 97
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=23.60 E-value=2.7e+02 Score=30.29 Aligned_cols=107 Identities=15% Similarity=0.056 Sum_probs=49.2
Q ss_pred hhHHHHHHHHHHhhCCCcEEEeeCCCCCCCCCC---C-CChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHhCCe
Q 003372 212 IDYIFISSLEVAQFLDLPLQIHTGFGDKDLDLR---L-SNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYVYPQ 287 (825)
Q Consensus 212 ~d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~~---~-~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~~pN 287 (825)
.+..+..+++.+.++|+++.+|....+...... + ..+ +..+.+. .+.+-+.++.|+.+-...++..++.. +
T Consensus 227 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~i~~l~~~--g 301 (492)
T 2paj_A 227 SPREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSP--VAFCGEH-DWLGSDVWYAHLVKVDADEIALLAQT--G 301 (492)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECC-------------CCCH--HHHHHHT-TCCSTTEEEESCCSCCHHHHHHHHHH--T
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHcCCCH--HHHHHHC-CCCCCCcEEEEEecCCHHHHHHHHHc--C
Confidence 344567788899999999999997532211110 0 112 2222221 22334678889865444443444432 3
Q ss_pred eeeccccccCcccHHHHHHHHHHHHHHCCCCcEEEecCC
Q 003372 288 VYLDFGLAIPKLSVQGMISSIKELLELAPTKKVMFSTDA 326 (825)
Q Consensus 288 Vyld~s~~~~~~~~~g~~~~l~~~le~~~~~kilfgSD~ 326 (825)
+++.+....+.....++ ..++.+++.+ -++.+|||+
T Consensus 302 v~v~~~p~~~~~l~~~~-~p~~~~~~~G--v~v~lgTD~ 337 (492)
T 2paj_A 302 TGVAHCPQSNGRLGSGI-CPVREMADAG--VPVSIGVDG 337 (492)
T ss_dssp CEEEECHHHHHCC------CCTTHHHHT--CCEEECCCH
T ss_pred CEEEECchhhcccCCCC-CCHHHHHHCC--CcEEEeCCC
Confidence 44432210000000011 1233445443 368899994
No 98
>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A
Probab=23.30 E-value=64 Score=28.96 Aligned_cols=66 Identities=15% Similarity=0.120 Sum_probs=44.4
Q ss_pred cCCchHHHHHHHHHHHhCCCCeeeeec-------C----CCCCceEEecCcChHH--------HHHHHHHHHHHHHHHHH
Q 003372 561 YDAVSPVFQEVLADLHSLNISVEQLHA-------E----AGKGQFEIALGHTVAA--------KAADNLIFTREVLRAVA 621 (825)
Q Consensus 561 ~~~~~~~~~~i~~~l~~~Gi~ve~~h~-------E----~~pGQ~Ei~l~~~~~l--------~aaD~~~~~r~~i~~iA 621 (825)
.....+++.+|.++|.+.||..++-.. + .+.-|||+.+--.+.+ +..=..+.+|.++..|.
T Consensus 36 ~~~P~eIm~eI~rvL~~~gi~~~~~g~y~l~C~~~~~~~~~~v~fElEVckl~~~~l~gV~~kRi~Gd~~~yk~lc~~il 115 (120)
T 3ose_A 36 SMDPNDMMREIRKVLDANNCDYEQKERFLLFCVHGDARQDSLVQWEMEVCKLPRLSLNGVRFKRISGTSIAFKNIASKIA 115 (120)
T ss_dssp CSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCTTTTCCEEEEEEEEEEGGGTEEEEEEEEEESCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEEcCCEEEEEEecCCCCCccEEEEEEEEEecCCCceeEEEEecCCCHHHHHHHHHHHH
Confidence 345789999999999999998887432 1 1245788876554311 11125577888888888
Q ss_pred HHCCC
Q 003372 622 RKHGL 626 (825)
Q Consensus 622 ~~~Gl 626 (825)
.+..|
T Consensus 116 ~~L~L 120 (120)
T 3ose_A 116 NELKL 120 (120)
T ss_dssp HHCCC
T ss_pred HHhcC
Confidence 76543
No 99
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=23.26 E-value=6.9e+02 Score=26.52 Aligned_cols=23 Identities=22% Similarity=0.231 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeC
Q 003372 213 DYIFISSLEVAQFLDLPLQIHTG 235 (825)
Q Consensus 213 d~~l~~l~e~~~e~glpvq~H~G 235 (825)
+..+..+++.+.++|+++.+|..
T Consensus 162 ~~~l~~~~~~a~~~~~~v~~H~e 184 (458)
T 1gkp_A 162 DGEMYQTLRLAKELGVIVTAHCE 184 (458)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEES
T ss_pred HHHHHHHHHHHHhcCCEEEEEcC
Confidence 33456677888888999999984
No 100
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=22.78 E-value=5.9e+02 Score=27.06 Aligned_cols=68 Identities=21% Similarity=0.140 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHhhCCCcEEEeeCCCCCCCCC----CCCChhchHHHHhhcCCCCcEEEEeCCCCchHHHHHHHHHh
Q 003372 213 DYIFISSLEVAQFLDLPLQIHTGFGDKDLDL----RLSNPLHLRAILEDKRFSKCRFVLLHASYPFSKEASYLAYV 284 (825)
Q Consensus 213 d~~l~~l~e~~~e~glpvq~H~G~gd~~~~~----~~~~P~~L~~l~~~~~~P~l~ivl~H~g~p~~~e~~~la~~ 284 (825)
+..+..+++.|.++|+++.+|.+..... .. .-..| +..+.+. ..-+-+.++.|+.+.-..+...++..
T Consensus 218 ~~~l~~~~~~a~~~g~~v~~H~~e~~~~-~~~~~~~~~~~--~~~~~~~-g~~~~~~~i~H~~~~~~~~~~~l~~~ 289 (456)
T 3ls9_A 218 PELFEAFAQMAADYDVRLHTHFYEPLDA-GMSDHLYGMTP--WRFLEKH-GWASDRVWLAHAVVPPREEIPEFADA 289 (456)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCTTHH-HHHHHHHSSCH--HHHHHHT-TCSSTTEEEEECCSCCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCchH-HHHHHHhCCCH--HHHHHHc-CCCCCCcEEEeccCCCHHHHHHHHHc
Confidence 3457778899999999999999643110 00 00112 1212221 23345677889864433444445543
No 101
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=20.87 E-value=7.2e+02 Score=26.32 Aligned_cols=35 Identities=14% Similarity=0.219 Sum_probs=22.3
Q ss_pred HHHHHhhhcCCCCChHHHHHHHHHHHHHhHHHHhcCCCC
Q 003372 345 FSVLRDTCIDEDLSVGEAIEVAKDIFALNAAQFYKINLG 383 (825)
Q Consensus 345 ~~~l~~~v~~g~l~~~~a~~~~~~Il~~NA~rly~L~~~ 383 (825)
...+..+++.+.++..+ .+ +.+-.|++++++++..
T Consensus 343 ~~~~~~~~~~~~l~~~~---al-~~~T~~~A~~lgl~~~ 377 (458)
T 1gkr_A 343 PMMLTNGVNKGRLSLER---LV-EVMCEKPAKLFGIYPQ 377 (458)
T ss_dssp HHHHHHTGGGTSSCHHH---HH-HHHTHHHHHHHTCTTT
T ss_pred HHHHHHHHHhCCCCHHH---HH-HHHhhhHHHHhCCCCC
Confidence 33455566667788753 44 4455778889999643
Done!