Your job contains 1 sequence.
>003374
MADNRNGNAQMANGTGGANAYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPA
SEDLRYLKSSALNIWLLGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADV
VIHVKAKTDDGVELMDAIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSG
FQLSDVTNGLSELFAVKDQEEIMNVKKAAVKDVAYSFNEDEEEEERPKVKAEANGTEALP
SKTTLRSDNQEISKEELRRQHQAELARQKNEETGRRLAGGGSGAGDNRASAKTTTDLIAY
KNVNDLLPPRDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNV
PGTPFNPHDTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERAT
LVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIM
FGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYD
PDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKA
SAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRIDS
IPSSSLDSIKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEFLNLEASDSE
SENSEESDQGYEPSDMEVDSVTEDEDSDSESLVESEDEEEEDSEEDSEEEKGKTWAELER
EATNADREKGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKRTKLR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003374
(825 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132756 - symbol:SPT16 "global transcription f... 2185 2.7e-299 2
TAIR|locus:2139217 - symbol:GTC2 species:3702 "Arabidopsi... 1243 1.4e-126 1
ZFIN|ZDB-GENE-031118-96 - symbol:supt16h "suppressor of T... 846 9.3e-117 3
RGD|1310032 - symbol:Supt16h "suppressor of Ty 16 homolog... 846 1.9e-116 3
MGI|MGI:1890948 - symbol:Supt16 "suppressor of Ty 16" spe... 845 3.1e-116 3
UNIPROTKB|E1BNP8 - symbol:SUPT16H "Uncharacterized protei... 846 6.5e-116 3
UNIPROTKB|E2REU7 - symbol:SUPT16H "Uncharacterized protei... 846 1.0e-115 3
UNIPROTKB|Q9Y5B9 - symbol:SUPT16H "FACT complex subunit S... 845 1.0e-115 3
UNIPROTKB|F1S8K5 - symbol:SUPT16H "Uncharacterized protei... 841 2.8e-115 3
DICTYBASE|DDB_G0282677 - symbol:spt16 "FACT complex subun... 863 1.5e-110 3
POMBASE|SPBP8B7.19 - symbol:spt16 "FACT complex subunit S... 835 8.2e-108 3
ASPGD|ASPL0000031805 - symbol:AN5102 species:162425 "Emer... 837 7.2e-107 3
FB|FBgn0002183 - symbol:dre4 "dre4" species:7227 "Drosoph... 842 1.2e-104 2
WB|WBGene00018849 - symbol:F55A3.3 species:6239 "Caenorha... 844 1.4e-103 2
CGD|CAL0005222 - symbol:CDC68 species:5476 "Candida albic... 797 2.3e-94 3
UNIPROTKB|Q5A1D5 - symbol:SPT16 "FACT complex subunit SPT... 797 2.3e-94 3
SGD|S000003175 - symbol:SPT16 "Subunit of the heterodimer... 769 3.3e-93 3
UNIPROTKB|Q9W603 - symbol:supt16h "FACT complex subunit S... 836 3.9e-89 2
WB|WBGene00018852 - symbol:F55A3.7 species:6239 "Caenorha... 238 5.0e-29 2
>TAIR|locus:2132756 [details] [associations]
symbol:SPT16 "global transcription factor C" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0009987 "cellular process" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005719 "nuclear euchromatin"
evidence=IDA] [GO:0035101 "FACT complex" evidence=IDA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0007346
"regulation of mitotic cell cycle" evidence=RCA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR000994
Pfam:PF00557 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0010228 GO:GO:0005719 Gene3D:3.90.230.10 SUPFAM:SSF55920
EMBL:AF080119 EMBL:AL161518 GO:GO:0035101 InterPro:IPR013719
Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 EMBL:AB493678 IPI:IPI00520940
PIR:T01906 RefSeq:NP_192809.1 UniGene:At.27606
ProteinModelPortal:O82491 SMR:O82491 STRING:O82491 PaxDb:O82491
PRIDE:O82491 EnsemblPlants:AT4G10710.1 GeneID:826665
KEGG:ath:AT4G10710 TAIR:At4g10710 InParanoid:O82491
PhylomeDB:O82491 ProtClustDB:CLSN2686053 Genevestigator:O82491
GermOnline:AT4G10710 Uniprot:O82491
Length = 1074
Score = 2185 (774.2 bits), Expect = 2.7e-299, Sum P(2) = 2.7e-299
Identities = 427/629 (67%), Positives = 477/629 (75%)
Query: 190 LSELFAVKDQE-EIMNVKKAAVKDVAYSFNXXXXXXXRPKVKAEANGTEALPSKTTLRSD 248
L++ V DQ+ E++ +VKDVAYSF +P+ KA +G+E +KT LRSD
Sbjct: 432 LADTVLVTDQKPELLTKCSKSVKDVAYSFKEDEEEE-KPRKKARTSGSENYITKTALRSD 490
Query: 249 NQEISKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP 308
+ +SKEELR+QHQAELARQKNEET KT+ D++AYKNVND+ P
Sbjct: 491 DHVVSKEELRKQHQAELARQKNEETARRLAGDSSGAGDSRSTAKTSADVVAYKNVNDM-P 549
Query: 309 PRDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPH 368
++LMIQ+D +NEAVL PIYGS+VPFHVATIRTVS QDTNRNCYIRIIFNVPGTPFNPH
Sbjct: 550 HKELMIQVDTRNEAVLLPIYGSLVPFHVATIRTVSGNQDTNRNCYIRIIFNVPGTPFNPH 609
Query: 369 DTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQEKLQ 428
D+NSLK+QGAIYLKEVSFR+KD RH EV IKTLRRQVMARESERAERATLVTQEKLQ
Sbjct: 610 DSNSLKNQGAIYLKEVSFRTKDSRHSSEVTQQIKTLRRQVMARESERAERATLVTQEKLQ 669
Query: 429 LAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIMFGNIKHAF 488
LAGN+FKP++L +LWIRP F GR +KIPGTLEAH NGFR++T+RP+ERVD++F NIKHAF
Sbjct: 670 LAGNKFKPLRLSELWIRPPFSGR-KKIPGTLEAHANGFRYSTTRPDERVDVLFANIKHAF 728
Query: 489 FQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIEEEQ 548
FQPAEKEMITL+HFHLHNHIMVG KKTKDVQFYVEVMDVVQ+LGGG+RSAYDPDEI+EEQ
Sbjct: 729 FQPAEKEMITLLHFHLHNHIMVGTKKTKDVQFYVEVMDVVQSLGGGRRSAYDPDEIDEEQ 788
Query: 549 RERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIVPTS 608
RER RKNKINMDF F NRVND+W P+F LDLEFDQPLR+LGFHGVPHK SAFI+PTS
Sbjct: 789 RERDRKNKINMDFNHFANRVNDMWQLPQFASLDLEFDQPLRELGFHGVPHKTSAFIIPTS 848
Query: 609 SCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXXXXXX 668
SCLVELIE PFLVV+L EIEIVNLERVG GQKNFDM I+FKDFKKDVLR
Sbjct: 849 SCLVELIEYPFLVVSLSEIEIVNLERVGFGQKNFDMAIIFKDFKKDVLRVDSVPTSSLEG 908
Query: 669 XKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEFXXXXXXXXXXXXXXXXX 728
KEWLDTTDIKYYES+LNLNWRQILKTITDDPQSFIDDGGWEF
Sbjct: 909 IKEWLDTTDIKYYESKLNLNWRQILKTITDDPQSFIDDGGWEFLNLDGSDSESGGSEESD 968
Query: 729 QGYEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKTWAELEREATNADRE 788
+GYEP KGKTW ELEREATNADRE
Sbjct: 969 KGYEPSDVEVESESEDEASESESLVESDDDEEEDSEQESEEEKGKTWDELEREATNADRE 1028
Query: 789 KGDDSDSEEERKRRKGKTFGKSRGPPSGG 817
G +SDSEEERKRRK K FGKSR SGG
Sbjct: 1029 HGVESDSEEERKRRKMKAFGKSRPGTSGG 1057
Score = 712 (255.7 bits), Expect = 2.7e-299, Sum P(2) = 2.7e-299
Identities = 139/219 (63%), Positives = 168/219 (76%)
Query: 1 MADNRNGNAQMA-NGTG--GANAYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIAT 57
MAD+RNGNA+ +G N YSI+++NF +R +ALY HW KH +D WGSAD LAIAT
Sbjct: 1 MADSRNGNARAPPSGVPPKAGNTYSIDVKNFISRARALYEHWKKHSADLWGSADALAIAT 60
Query: 58 PPASEDLRYLKSSALNIWLLGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVG 117
PPAS+DLRYLKSSALNIWLLGYEFP+T+MVF KKQI FLCS+ KASLL +VK+ A D +
Sbjct: 61 PPASDDLRYLKSSALNIWLLGYEFPDTIMVFTKKQIHFLCSRNKASLLEVVKKPAHDELK 120
Query: 118 ADVVIHVKAKTDDGVELMDAIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQ 177
DV++HVK K DDG LMDAIF A+R S D D +VG IARE PEG+LLETW +RL+
Sbjct: 121 LDVIMHVKPKGDDGTGLMDAIFRAIRDLSRGDGNDSQVVGHIAREAPEGKLLETWTERLK 180
Query: 178 NSGFQLSDVTNGLSELFAVKDQEEIMNVKKAAVKDVAYS 216
N+ FQ D+T GLS+LFAVKD E+M+VKKAA +AYS
Sbjct: 181 NANFQFVDITGGLSDLFAVKDDTEVMSVKKAAY--LAYS 217
Score = 40 (19.1 bits), Expect = 1.4e-71, Sum P(2) = 1.4e-71
Identities = 26/125 (20%), Positives = 45/125 (36%)
Query: 310 RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPH- 368
R+ + I+ KN+ VL P V + S + N+ + + V T P
Sbjct: 386 RESGLNINAKNDKVLRPKMAFNVSLGFQNLECESESRSKNKKFSLLLADTVLVTDQKPEL 445
Query: 369 ---DTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQE 425
+ S+K A KE K PR G+ + + + + + L Q
Sbjct: 446 LTKCSKSVKDV-AYSFKEDEEEEK-PRKKARTSGSENYITKTALRSDDHVVSKEELRKQH 503
Query: 426 KLQLA 430
+ +LA
Sbjct: 504 QAELA 508
>TAIR|locus:2139217 [details] [associations]
symbol:GTC2 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 InterPro:IPR013719
Pfam:PF08512 InterPro:IPR013953 Pfam:PF08644 IPI:IPI00536333
RefSeq:NP_192805.2 UniGene:At.54263 EnsemblPlants:AT4G10670.1
GeneID:826660 KEGG:ath:AT4G10670 ArrayExpress:F4JME7 Uniprot:F4JME7
Length = 343
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 245/346 (70%), Positives = 282/346 (81%)
Query: 313 MIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDTNS 372
MI +D K++ VL PIYG MVPF+V TIRTV Q+T IR+IFNVPGTP NP+D S
Sbjct: 1 MITVDHKSDTVLLPIYGRMVPFNVTTIRTVLGNQNT-----IRVIFNVPGTPLNPND--S 53
Query: 373 LKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQEKLQLAGN 432
LK++ AIYLKEVSFR+KD RH +VV +K+LRR+VMARESERAER +LV QEKLQ+ N
Sbjct: 54 LKNKDAIYLKEVSFRTKDSRHSSDVVQQVKSLRRKVMARESERAERTSLVNQEKLQIVRN 113
Query: 433 RFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIMFGNIKHAFFQPA 492
KP+ L +LWIRP F GR +K GTLEAH+NGFR++T+ ERVD++F NIKHAFFQPA
Sbjct: 114 NSKPLSLSNLWIRPPFSGR-KKNRGTLEAHVNGFRYSTTN--ERVDVLFANIKHAFFQPA 170
Query: 493 EKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRS-AYDPDEIEEEQRER 551
EKEM TL+HFHLHNHIMVG KKTKDVQFYVEVMDVVQ+LGG +RS AYD DEI EEQRER
Sbjct: 171 EKEMTTLLHFHLHNHIMVGTKKTKDVQFYVEVMDVVQSLGGRRRSSAYDADEIVEEQRER 230
Query: 552 ARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIVPTSSCL 611
RKNKINMDF F N+VND+W P+F L LEFDQPLR+ GF+GVPHK S FI+PTSSCL
Sbjct: 231 DRKNKINMDFNHFANQVNDMWQLPQFASLSLEFDQPLREFGFNGVPHKTSTFIIPTSSCL 290
Query: 612 VELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLR 657
VEL E+PFLVV L EIEIVNLERVG GQK+FDM I+FKD KKDVLR
Sbjct: 291 VELTESPFLVVCLSEIEIVNLERVGFGQKSFDMAIIFKDLKKDVLR 336
>ZFIN|ZDB-GENE-031118-96 [details] [associations]
symbol:supt16h "suppressor of Ty 16 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0009987 "cellular
process" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000994 Pfam:PF00557 ZFIN:ZDB-GENE-031118-96
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 InterPro:IPR013719
Pfam:PF08512 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 EMBL:BX248243 EMBL:CABZ01078837
IPI:IPI00997833 Ensembl:ENSDART00000126840 ArrayExpress:E7F5E9
Bgee:E7F5E9 Uniprot:E7F5E9
Length = 1077
Score = 846 (302.9 bits), Expect = 9.3e-117, Sum P(3) = 9.3e-117
Identities = 197/534 (36%), Positives = 293/534 (54%)
Query: 197 KDQEEIMNVKKAAVKDVAYSFNXXXXXXXRPKVKAEANGTEALPSK----TTLRSDN--Q 250
+DQ ++ K +K+V + + E + E L K L +D
Sbjct: 456 EDQATVLTPVKKKIKNVGIFLKNDD----EDEDEEEGDNAEELLGKGARSAALLADRTRN 511
Query: 251 EISKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLPP- 309
E++ EE RR HQ ELA Q NEE K ++YKNV+ +
Sbjct: 512 EMTAEEKRRTHQKELANQVNEEAKRRLTEQKGGQQIQ----KVRKSNVSYKNVSQMPKEK 567
Query: 310 --RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNP 367
RD+ I ID+K+E V+ P++G PFH+ATI+ +S + + Y+RI F VPG+
Sbjct: 568 DIRDMKIFIDKKHETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFFVPGSSLGR 626
Query: 368 HDTNSLKHQGAIYLKEVSFRS---KDP-------RHIGEVVGAIKTLRRQVMARESERAE 417
H+ N + A ++KE+++R+ K P ++ IK ++++ RE+E E
Sbjct: 627 HEGNIFPNPEATFVKEITYRASNLKSPGDHSVPSTNLQNAFRIIKEVQKRYKTREAEEKE 686
Query: 418 RATLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERV 477
+ +V Q+ L + NR P KL DL+IRP + ++ G+LEAH NGFRF + R + +V
Sbjct: 687 KEGIVKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHTNGFRFTSVRGD-KV 742
Query: 478 DIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRS 537
DI++ NIKHA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG +
Sbjct: 743 DILYNNIKHAIFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM 802
Query: 538 AYDPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVP 597
+D D++ EQ ER ++K+ F++F+ +V L + +LEF+ P RDLGF G P
Sbjct: 803 -HDRDDLYAEQMEREMRHKLKSAFKNFIEKVESLTKE------ELEFEVPFRDLGFQGAP 855
Query: 598 HKASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLR 657
++++ + PTSS L + E P VVTL E+E+V+ ERV KNFD+ IV+KD+ K V
Sbjct: 856 YRSTCLLQPTSSSLCNVTEWPPFVVTLDEVELVHFERVQFHLKNFDVVIVYKDYNKKVTM 915
Query: 658 XXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 711
KEWL++ DIKY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 916 INAVPVNSLDPIKEWLNSCDIKYTEGIQSLNWTKIMKTIVDDPEGFFEQGGWSF 969
Score = 252 (93.8 bits), Expect = 9.3e-117, Sum P(3) = 9.3e-117
Identities = 59/193 (30%), Positives = 102/193 (52%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A S++ + F R+K LY +W K + ++ G D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVSLDKDAFYRRIKRLYGNWKKGEDEF-GKVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVK--RSAKDAVGAD-VVIHVKAKTDDGVELMD 136
E +T+MVF + +I FL S+KK L V + ++A G + + V+ K + D
Sbjct: 60 ELTDTIMVFCESKIIFLASKKKVEFLKQVAVTKGNENANGVPPITLLVREKNESNKVNFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ A+R S +G VG ++ G +++W+D + G Q D++ ++ AV
Sbjct: 120 KMIEAIRG-----SKEGKTVGVFIKDKFPGEYMKSWSDTITAEGLQKVDISTVVAYTMAV 174
Query: 197 KDQEEIMNVKKAA 209
K+ E+ +KKAA
Sbjct: 175 KEDGELALMKKAA 187
Score = 87 (35.7 bits), Expect = 9.3e-117, Sum P(3) = 9.3e-117
Identities = 23/50 (46%), Positives = 25/50 (50%)
Query: 772 GKTWAELEREATNADREKGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKR 821
GK W ELE EA ADRE + EE RK K G+S PP KR
Sbjct: 1030 GKDWDELEEEARKADRES--QYEEVEETSNRKRK--GRSSAPPPRSKKKR 1075
Score = 57 (25.1 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 516 KDVQFYVEVMDVVQTLGGGKRSAYDPDEIEEEQRERARKNK 556
+D E D +LG + S D DE+EEE R+ R+++
Sbjct: 1008 EDYSSETEDSDYSASLGSEEESGKDWDELEEEARKADRESQ 1048
Score = 46 (21.3 bits), Expect = 1.9e-112, Sum P(3) = 1.9e-112
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 776 AELEREATN--ADREKGDDSDSEEE 798
+E+E E N AD E+ ++ DS+E+
Sbjct: 985 SEIEDETFNPSADEEEEEEEDSDED 1009
Score = 43 (20.2 bits), Expect = 8.9e-95, Sum P(3) = 8.9e-95
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 182 QLSDVTNGLSELFAVKDQEEIMNVKKAA 209
++ D++ ++ AVK+ E+ +KKAA
Sbjct: 204 EIVDISTVVAYTMAVKEDGELALMKKAA 231
Score = 39 (18.8 bits), Expect = 1.0e-111, Sum P(3) = 1.0e-111
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 775 WAELEREATNADREKGDDSDSEEE 798
W+ L+ E+ + E+ +S+ E+E
Sbjct: 967 WSFLDPESEGSGGEEDSESEIEDE 990
Score = 39 (18.8 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 789 KGDDSDSEEERKRRKGKTFGK 809
K DD D +EE + GK
Sbjct: 477 KNDDEDEDEEEGDNAEELLGK 497
>RGD|1310032 [details] [associations]
symbol:Supt16h "suppressor of Ty 16 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0009987 "cellular process"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557 RGD:1310032
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0009987 EMBL:CH474040
InterPro:IPR013719 Pfam:PF08512 CTD:11198 OMA:MEIIDAD
OrthoDB:EOG40K7Z3 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 IPI:IPI00869870 RefSeq:NP_001100731.1
UniGene:Rn.93187 Ensembl:ENSRNOT00000016288 GeneID:305851
KEGG:rno:305851 UCSC:RGD:1310032 NextBio:655127 Uniprot:D4A4J0
Length = 1047
Score = 846 (302.9 bits), Expect = 1.9e-116, Sum P(3) = 1.9e-116
Identities = 201/526 (38%), Positives = 299/526 (56%)
Query: 202 IMNVKKAAVKDVA-YSFNXXXXXXXRPKVKAE-ANGTEALPSKTTLRSDNQEISKEELRR 259
+ +VKK VK+V + N K +AE G + + T R+ N E++ EE RR
Sbjct: 418 LTSVKKK-VKNVGIFLKNEDDEEEEEEKDEAEDLLGRGSRAALLTERTRN-EMTAEEKRR 475
Query: 260 QHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP--P--RDLMIQ 315
HQ ELA Q NEE K ++YKN + L+P P R++ I
Sbjct: 476 AHQKELAAQLNEEAKRRLTEQKGEQQIQ----KARKSNVSYKNPS-LMPKEPHIREMKIY 530
Query: 316 IDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDTNSLKH 375
ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++ N +
Sbjct: 531 IDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNEGNIFPN 589
Query: 376 QGAIYLKEVSFRSKDPRHIGE-VVGA---------IKTLRRQVMARESERAERATLVTQE 425
A ++KE+++R+ + + GE V A IK ++++ RE+E E+ +V Q+
Sbjct: 590 PEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQD 649
Query: 426 KLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIMFGNIK 485
L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI++ NIK
Sbjct: 650 SLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDILYNNIK 705
Query: 486 HAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIE 545
HA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG + +D D++
Sbjct: 706 HALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HDRDDLY 764
Query: 546 EEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIV 605
EQ ER ++K+ F++F+ +V L + +LEF+ P RDLGF+G P++++ +
Sbjct: 765 AEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRSTCLLQ 818
Query: 606 PTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXXX 665
PTSS LV E P VVTL E+E+++ ERV KNFDM IV+KD+ K V
Sbjct: 819 PTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAIPVAS 878
Query: 666 XXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 711
KEWL++ D+KY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 879 LDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 924
Score = 251 (93.4 bits), Expect = 1.9e-116, Sum P(3) = 1.9e-116
Identities = 57/193 (29%), Positives = 103/193 (53%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ + + R+K LYS+W K + +Y S D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRKGEDEY-ASIDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVELMD 136
E +T+MVF +I F+ S+KK L + + ++A GA + + V+ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLVREKNESNKSSFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ A++ N G +G +++ G +++W+D L GF D++ ++ AV
Sbjct: 120 KMIEAIKESKN-----GKKIGVFSKDKFPGEFMKSWSDCLNKEGFDKVDISAVVAYTIAV 174
Query: 197 KDQEEIMNVKKAA 209
K+ E+ +KKAA
Sbjct: 175 KEDGELNLMKKAA 187
Score = 85 (35.0 bits), Expect = 1.9e-116, Sum P(3) = 1.9e-116
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 772 GKTWAELEREATNADREKGDDSDSEEER---KRRKGKTFGKSRGPPSG 816
GK W ELE EA ADRE + + E+ R ++RK RG G
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRG 1034
Score = 55 (24.4 bits), Expect = 2.9e-17, Sum P(3) = 2.9e-17
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 529 QTLGGGKRSAYDPDEIEEEQRERARKNK 556
++LG + S D DE+EEE R+ R+++
Sbjct: 978 ESLGSEEESGKDWDELEEEARKADRESR 1005
Score = 51 (23.0 bits), Expect = 7.3e-113, Sum P(3) = 7.3e-113
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 775 WAELEREATNADREKGD-DSDSEEE 798
W+ LE E +D E GD +S+ E+E
Sbjct: 922 WSFLEPEGEGSDAEDGDSESEIEDE 946
Score = 44 (20.5 bits), Expect = 4.0e-112, Sum P(3) = 4.0e-112
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 776 AELEREATNADREKGDDSDSEEERKRR 802
++ +E+ ++ E G D D EE R+
Sbjct: 973 SDYSKESLGSEEESGKDWDELEEEARK 999
Score = 40 (19.1 bits), Expect = 9.8e-16, Sum P(3) = 9.8e-16
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 789 KGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKRTK 823
K +D + EEE K G RG + +RT+
Sbjct: 433 KNEDDEEEEEEKDEAEDLLG--RGSRAALLTERTR 465
Score = 38 (18.4 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 369 DTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQEKLQ 428
+ N +K +I EV F + E+V A + +R +A E+A +EK
Sbjct: 179 ELNLMKKAASI-TSEV-FNKFFKERVMEIVDADEKVRHSKLAESVEKA------IEEKKY 230
Query: 429 LAG 431
LAG
Sbjct: 231 LAG 233
Score = 38 (18.4 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 535 KRSAYDPDEIEEEQRERARKNKINM 559
+ S Y+ E EE+ R +RK K ++
Sbjct: 1002 RESRYE--EEEEQSRSMSRKRKASV 1024
>MGI|MGI:1890948 [details] [associations]
symbol:Supt16 "suppressor of Ty 16" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0009987 "cellular process" evidence=IEA] InterPro:IPR000994
Pfam:PF00557 MGI:MGI:1890948 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
Gene3D:3.90.230.10 SUPFAM:SSF55920 InterPro:IPR013719 Pfam:PF08512
UniGene:Mm.21662 MEROPS:M24.974 eggNOG:COG5406 HOGENOM:HOG000209079
HOVERGEN:HBG092544 OrthoDB:EOG40K7Z3 InterPro:IPR013953
Pfam:PF08644 EMBL:AF323667 EMBL:AK148506 EMBL:AK158116
EMBL:BC012433 IPI:IPI00120344 RefSeq:NP_291096.2 UniGene:Mm.489682
ProteinModelPortal:Q920B9 SMR:Q920B9 DIP:DIP-55972N IntAct:Q920B9
STRING:Q920B9 PhosphoSite:Q920B9 PaxDb:Q920B9 PRIDE:Q920B9
GeneID:114741 KEGG:mmu:114741 UCSC:uc007tor.1 CTD:114741
InParanoid:Q920B9 NextBio:368789 CleanEx:MM_SUPT16H
Genevestigator:Q920B9 GermOnline:ENSMUSG00000035726 Uniprot:Q920B9
Length = 1047
Score = 845 (302.5 bits), Expect = 3.1e-116, Sum P(3) = 3.1e-116
Identities = 200/526 (38%), Positives = 299/526 (56%)
Query: 202 IMNVKKAAVKDVA-YSFNXXXXXXXRPKVKAE-ANGTEALPSKTTLRSDNQEISKEELRR 259
+ +VKK VK+V + N K +AE G + + T R+ N E++ EE RR
Sbjct: 418 LTSVKKK-VKNVGIFLKNEDDEEEEEEKDEAEDLLGRGSRAALLTERTRN-EMTAEEKRR 475
Query: 260 QHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP--P--RDLMIQ 315
HQ ELA Q NEE K ++YKN + L+P P R++ I
Sbjct: 476 AHQKELAAQLNEEAKRRLTEQKGEQQIQ----KARKSNVSYKNPS-LMPKEPHIREMKIY 530
Query: 316 IDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDTNSLKH 375
ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++ N +
Sbjct: 531 IDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNEGNIFPN 589
Query: 376 QGAIYLKEVSFRSKDPRHIGE-VVGA---------IKTLRRQVMARESERAERATLVTQE 425
A ++KE+++R+ + + GE V A IK ++++ RE+E E+ +V Q+
Sbjct: 590 PEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQD 649
Query: 426 KLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIMFGNIK 485
L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI++ NIK
Sbjct: 650 SLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDILYNNIK 705
Query: 486 HAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIE 545
HA FQP + EMI ++HFHL N +M G K+ DVQFY EV ++ LG + +D D++
Sbjct: 706 HALFQPCDGEMIIVLHFHLKNAVMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HDRDDLY 764
Query: 546 EEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIV 605
EQ ER ++K+ F++F+ +V L + +LEF+ P RDLGF+G P++++ +
Sbjct: 765 AEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRSTCLLQ 818
Query: 606 PTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXXX 665
PTSS LV E P VVTL E+E+++ ERV KNFDM IV+KD+ K V
Sbjct: 819 PTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAIPVAS 878
Query: 666 XXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 711
KEWL++ D+KY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 879 LDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 924
Score = 250 (93.1 bits), Expect = 3.1e-116, Sum P(3) = 3.1e-116
Identities = 57/193 (29%), Positives = 105/193 (54%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ + + R+K LYS+W K + +Y S D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRKGEDEY-ASIDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVELMD 136
E +T+MVF +I F+ S+KK L + + ++A GA + + V+ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLVREKNESNKSSFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ +A++ +S G +G +++ G +++W+D L GF D++ ++ AV
Sbjct: 120 KMIDAIK-----ESKSGKKIGVFSKDKFPGEFMKSWSDCLNKEGFDKVDISAVVAYTIAV 174
Query: 197 KDQEEIMNVKKAA 209
K+ E+ +KKAA
Sbjct: 175 KEDGELNLMKKAA 187
Score = 85 (35.0 bits), Expect = 3.1e-116, Sum P(3) = 3.1e-116
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 772 GKTWAELEREATNADREKGDDSDSEEER---KRRKGKTFGKSRGPPSG 816
GK W ELE EA ADRE + + E+ R ++RK RG G
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRG 1034
Score = 55 (24.4 bits), Expect = 3.7e-17, Sum P(3) = 3.7e-17
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 529 QTLGGGKRSAYDPDEIEEEQRERARKNK 556
++LG + S D DE+EEE R+ R+++
Sbjct: 978 ESLGSEEESGKDWDELEEEARKADRESR 1005
Score = 51 (23.0 bits), Expect = 1.2e-112, Sum P(3) = 1.2e-112
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 775 WAELEREATNADREKGD-DSDSEEE 798
W+ LE E +D E GD +S+ E+E
Sbjct: 922 WSFLEPEGEGSDAEDGDSESEIEDE 946
Score = 44 (20.5 bits), Expect = 6.4e-112, Sum P(3) = 6.4e-112
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 776 AELEREATNADREKGDDSDSEEERKRR 802
++ +E+ ++ E G D D EE R+
Sbjct: 973 SDYSKESLGSEEESGKDWDELEEEARK 999
Score = 40 (19.1 bits), Expect = 1.3e-15, Sum P(3) = 1.3e-15
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 789 KGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKRTK 823
K +D + EEE K G RG + +RT+
Sbjct: 433 KNEDDEEEEEEKDEAEDLLG--RGSRAALLTERTR 465
Score = 38 (18.4 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 369 DTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQEKLQ 428
+ N +K +I EV F + E+V A + +R +A E+A +EK
Sbjct: 179 ELNLMKKAASI-TSEV-FNKFFKERVMEIVDADEKVRHSKLAESVEKA------IEEKKY 230
Query: 429 LAG 431
LAG
Sbjct: 231 LAG 233
Score = 38 (18.4 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 535 KRSAYDPDEIEEEQRERARKNKINM 559
+ S Y+ E EE+ R +RK K ++
Sbjct: 1002 RESRYE--EEEEQSRSMSRKRKASV 1024
>UNIPROTKB|E1BNP8 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009987 "cellular process" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512 CTD:11198 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 GeneTree:ENSGT00390000014495
EMBL:DAAA02028315 IPI:IPI00696830 RefSeq:NP_001179321.1
UniGene:Bt.2157 PRIDE:E1BNP8 Ensembl:ENSBTAT00000027214
GeneID:514989 KEGG:bta:514989 NextBio:20871607 Uniprot:E1BNP8
Length = 1047
Score = 846 (302.9 bits), Expect = 6.5e-116, Sum P(3) = 6.5e-116
Identities = 201/526 (38%), Positives = 299/526 (56%)
Query: 202 IMNVKKAAVKDVA-YSFNXXXXXXXRPKVKAE-ANGTEALPSKTTLRSDNQEISKEELRR 259
+ +VKK VK+V + N K +AE G + + T R+ N E++ EE RR
Sbjct: 418 LTSVKKK-VKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRN-EMTAEEKRR 475
Query: 260 QHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP--P--RDLMIQ 315
HQ ELA Q NEE K ++YKN + L+P P R++ I
Sbjct: 476 AHQKELAAQLNEEAKRRLTEQKGEQQIQ----KARKSNVSYKNPS-LMPKEPHIREMKIY 530
Query: 316 IDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDTNSLKH 375
ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++ N +
Sbjct: 531 IDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNEGNIFPN 589
Query: 376 QGAIYLKEVSFRSKDPRHIGE-VVGA---------IKTLRRQVMARESERAERATLVTQE 425
A ++KE+++R+ + + GE V A IK ++++ RE+E E+ +V Q+
Sbjct: 590 PEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQD 649
Query: 426 KLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIMFGNIK 485
L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI++ NIK
Sbjct: 650 SLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDILYNNIK 705
Query: 486 HAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIE 545
HA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG + +D D++
Sbjct: 706 HALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HDRDDLY 764
Query: 546 EEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIV 605
EQ ER ++K+ F++F+ +V L + +LEF+ P RDLGF+G P++++ +
Sbjct: 765 AEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRSTCLLQ 818
Query: 606 PTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXXX 665
PTSS LV E P VVTL E+E+++ ERV KNFDM IV+KD+ K V
Sbjct: 819 PTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAIPVAS 878
Query: 666 XXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 711
KEWL++ D+KY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 879 LDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 924
Score = 246 (91.7 bits), Expect = 6.5e-116, Sum P(3) = 6.5e-116
Identities = 56/193 (29%), Positives = 102/193 (52%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ + + R+K LYS+W K + +Y + D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRKGEDEY-ANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVELMD 136
E +T+MVF +I F+ S+KK L + + ++A GA + + V+ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLVREKNESNKSSFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ A++ N G +G +++ G +++W D L GF D++ ++ AV
Sbjct: 120 KMIEAIKESKN-----GKKIGVFSKDKFPGEFMKSWNDCLNKEGFDKIDISAVVAYTIAV 174
Query: 197 KDQEEIMNVKKAA 209
K+ E+ +KKAA
Sbjct: 175 KEDGELNLMKKAA 187
Score = 85 (35.0 bits), Expect = 6.5e-116, Sum P(3) = 6.5e-116
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 772 GKTWAELEREATNADREKGDDSDSEEER---KRRKGKTFGKSRGPPSG 816
GK W ELE EA ADRE + + E+ R ++RK RG G
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRG 1034
Score = 55 (24.4 bits), Expect = 1.0e-16, Sum P(3) = 1.0e-16
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 529 QTLGGGKRSAYDPDEIEEEQRERARKNK 556
++LG + S D DE+EEE R+ R+++
Sbjct: 978 ESLGSEEESGKDWDELEEEARKADRESR 1005
Score = 53 (23.7 bits), Expect = 1.5e-112, Sum P(3) = 1.5e-112
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 775 WAELEREATNADREKGD-DSDSEEE 798
W+ LE E +D E+GD +S+ E+E
Sbjct: 922 WSFLEPEGEGSDAEEGDSESEIEDE 946
Score = 44 (20.5 bits), Expect = 1.3e-111, Sum P(3) = 1.3e-111
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 776 AELEREATNADREKGDDSDSEEERKRR 802
++ +E+ ++ E G D D EE R+
Sbjct: 973 SDYSKESLGSEEESGKDWDELEEEARK 999
Score = 40 (19.1 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 789 KGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKRTK 823
K +D + EEE K G RG + +RT+
Sbjct: 433 KNEDEEEEEEEKDEAEDLLG--RGSRAALLTERTR 465
Score = 39 (18.8 bits), Expect = 4.5e-111, Sum P(3) = 4.5e-111
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 771 KGKTWAELEREATNADRE--KGDDSDSEEE 798
+G + +E+E E N E + ++ DS+E+
Sbjct: 936 EGDSESEIEDETFNPSEEDYEEEEEDSDED 965
Score = 38 (18.4 bits), Expect = 8.5e-20, Sum P(3) = 8.5e-20
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 369 DTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQEKLQ 428
+ N +K +I EV F + E+V A + +R +A E+A +EK
Sbjct: 179 ELNLMKKAASI-TSEV-FNKFFKERVMEIVDADEKVRHSKLAESVEKA------IEEKKY 230
Query: 429 LAG 431
LAG
Sbjct: 231 LAG 233
Score = 38 (18.4 bits), Expect = 5.5e-15, Sum P(3) = 5.5e-15
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 535 KRSAYDPDEIEEEQRERARKNKINM 559
+ S Y+ E EE+ R +RK K ++
Sbjct: 1002 RESRYE--EEEEQSRSMSRKRKASV 1024
>UNIPROTKB|E2REU7 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0009987 "cellular process"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512
CTD:11198 OMA:MEIIDAD InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 EMBL:AAEX03009852 RefSeq:XP_851566.1
Ensembl:ENSCAFT00000009018 GeneID:612874 KEGG:cfa:612874
NextBio:20898360 Uniprot:E2REU7
Length = 1047
Score = 846 (302.9 bits), Expect = 1.0e-115, Sum P(3) = 1.0e-115
Identities = 201/526 (38%), Positives = 299/526 (56%)
Query: 202 IMNVKKAAVKDVA-YSFNXXXXXXXRPKVKAE-ANGTEALPSKTTLRSDNQEISKEELRR 259
+ +VKK VK+V + N K +AE G + + T R+ N E++ EE RR
Sbjct: 418 LTSVKKK-VKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRN-EMTAEEKRR 475
Query: 260 QHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP--P--RDLMIQ 315
HQ ELA Q NEE K ++YKN + L+P P R++ I
Sbjct: 476 AHQKELAAQLNEEAKRRLTEQKGEQQIQ----KARKSNVSYKNPS-LMPKEPHIREMKIY 530
Query: 316 IDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDTNSLKH 375
ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++ N +
Sbjct: 531 IDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNEGNIFPN 589
Query: 376 QGAIYLKEVSFRSKDPRHIGE-VVGA---------IKTLRRQVMARESERAERATLVTQE 425
A ++KE+++R+ + + GE V A IK ++++ RE+E E+ +V Q+
Sbjct: 590 PEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQD 649
Query: 426 KLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIMFGNIK 485
L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI++ NIK
Sbjct: 650 SLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDILYNNIK 705
Query: 486 HAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIE 545
HA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG + +D D++
Sbjct: 706 HALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HDRDDLY 764
Query: 546 EEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIV 605
EQ ER ++K+ F++F+ +V L + +LEF+ P RDLGF+G P++++ +
Sbjct: 765 AEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRSTCLLQ 818
Query: 606 PTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXXX 665
PTSS LV E P VVTL E+E+++ ERV KNFDM IV+KD+ K V
Sbjct: 819 PTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAIPVAS 878
Query: 666 XXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 711
KEWL++ D+KY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 879 LDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 924
Score = 244 (91.0 bits), Expect = 1.0e-115, Sum P(3) = 1.0e-115
Identities = 55/193 (28%), Positives = 101/193 (52%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ + + R+K LYS+W K + +Y + D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRKGEDEY-ANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVELMD 136
E +T+MVF +I F+ S+KK L + + ++A GA + + ++ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLIREKNESNKSSFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ A++ N G +G +++ G ++ W D L GF D++ ++ AV
Sbjct: 120 KMIEAIKESKN-----GKKIGVFSKDKFPGEFMKNWNDCLNKEGFDKIDISAVVAYTIAV 174
Query: 197 KDQEEIMNVKKAA 209
K+ E+ +KKAA
Sbjct: 175 KEDGELNLMKKAA 187
Score = 85 (35.0 bits), Expect = 1.0e-115, Sum P(3) = 1.0e-115
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 772 GKTWAELEREATNADREKGDDSDSEEER---KRRKGKTFGKSRGPPSG 816
GK W ELE EA ADRE + + E+ R ++RK RG G
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRG 1034
Score = 55 (24.4 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 529 QTLGGGKRSAYDPDEIEEEQRERARKNK 556
++LG + S D DE+EEE R+ R+++
Sbjct: 978 ESLGSEEESGKDWDELEEEARKADRESR 1005
Score = 53 (23.7 bits), Expect = 2.4e-112, Sum P(3) = 2.4e-112
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 775 WAELEREATNADREKGD-DSDSEEE 798
W+ LE E +D E+GD +S+ E+E
Sbjct: 922 WSFLEPEGEGSDAEEGDSESEIEDE 946
Score = 44 (20.5 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 776 AELEREATNADREKGDDSDSEEERKRR 802
++ +E+ ++ E G D D EE R+
Sbjct: 973 SDYSKESLGSEEESGKDWDELEEEARK 999
Score = 40 (19.1 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 789 KGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKRTK 823
K +D + EEE K G RG + +RT+
Sbjct: 433 KNEDEEEEEEEKDEAEDLLG--RGSRAALLTERTR 465
Score = 38 (18.4 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 369 DTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQEKLQ 428
+ N +K +I EV F + E+V A + +R +A E+A +EK
Sbjct: 179 ELNLMKKAASI-TSEV-FNKFFKERVMEIVDADEKVRHSKLAESVEKA------IEEKKY 230
Query: 429 LAG 431
LAG
Sbjct: 231 LAG 233
Score = 38 (18.4 bits), Expect = 9.1e-15, Sum P(3) = 9.1e-15
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 535 KRSAYDPDEIEEEQRERARKNKINM 559
+ S Y+ E EE+ R +RK K ++
Sbjct: 1002 RESRYE--EEEEQSRSMSRKRKASV 1024
>UNIPROTKB|Q9Y5B9 [details] [associations]
symbol:SUPT16H "FACT complex subunit SPT16" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=TAS]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0050434 "positive regulation of viral transcription"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000994 Pfam:PF00557
Reactome:REACT_116125 GO:GO:0005694 GO:GO:0005654 GO:GO:0016032
GO:GO:0006260 GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0006337 Reactome:REACT_1788 GO:GO:0050434
Reactome:REACT_1892 GO:GO:0032786 InterPro:IPR013719 Pfam:PF08512
EMBL:AF152961 EMBL:BC000565 EMBL:BC014046 EMBL:BC064561
EMBL:BC073849 EMBL:AF164924 IPI:IPI00026970 RefSeq:NP_009123.1
UniGene:Hs.213724 ProteinModelPortal:Q9Y5B9 SMR:Q9Y5B9
DIP:DIP-42757N IntAct:Q9Y5B9 MINT:MINT-2823866 STRING:Q9Y5B9
MEROPS:M24.974 PhosphoSite:Q9Y5B9 DMDM:74753511 PaxDb:Q9Y5B9
PeptideAtlas:Q9Y5B9 PRIDE:Q9Y5B9 Ensembl:ENST00000216297
GeneID:11198 KEGG:hsa:11198 UCSC:uc001wao.2 CTD:11198
GeneCards:GC14M021819 HGNC:HGNC:11465 HPA:CAB022551 MIM:605012
neXtProt:NX_Q9Y5B9 PharmGKB:PA36251 eggNOG:COG5406
HOGENOM:HOG000209079 HOVERGEN:HBG092544 InParanoid:Q9Y5B9
OMA:MEIIDAD OrthoDB:EOG40K7Z3 PhylomeDB:Q9Y5B9 ChiTaRS:SUPT16H
GenomeRNAi:11198 NextBio:42621 ArrayExpress:Q9Y5B9 Bgee:Q9Y5B9
CleanEx:HS_SUPT16H Genevestigator:Q9Y5B9 GermOnline:ENSG00000092201
InterPro:IPR013953 Pfam:PF08644 Uniprot:Q9Y5B9
Length = 1047
Score = 845 (302.5 bits), Expect = 1.0e-115, Sum P(3) = 1.0e-115
Identities = 201/526 (38%), Positives = 299/526 (56%)
Query: 202 IMNVKKAAVKDVA-YSFNXXXXXXXRPKVKAE-ANGTEALPSKTTLRSDNQEISKEELRR 259
+ +VKK VK+V + N K +AE G + + T R+ N E++ EE RR
Sbjct: 418 LTSVKKK-VKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRN-EMTAEEKRR 475
Query: 260 QHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP--P--RDLMIQ 315
HQ ELA Q NEE K ++YKN + L+P P R++ I
Sbjct: 476 AHQKELAAQLNEEAKRRLTEQKGEQQIQ----KARKSNVSYKNPS-LMPKEPHIREMKIY 530
Query: 316 IDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDTNSLKH 375
ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++ N +
Sbjct: 531 IDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNEGNIFPN 589
Query: 376 QGAIYLKEVSFRSKDPRHIGE-VVGA---------IKTLRRQVMARESERAERATLVTQE 425
A ++KE+++R+ + + GE V A IK ++++ RE+E E+ +V Q+
Sbjct: 590 PEATFVKEITYRASNIKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQD 649
Query: 426 KLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIMFGNIK 485
L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI++ NIK
Sbjct: 650 SLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDILYNNIK 705
Query: 486 HAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEIE 545
HA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG + +D D++
Sbjct: 706 HALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HDRDDLY 764
Query: 546 EEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIV 605
EQ ER ++K+ F++F+ +V L + +LEF+ P RDLGF+G P++++ +
Sbjct: 765 AEQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRSTCLLQ 818
Query: 606 PTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXXX 665
PTSS LV E P VVTL E+E+++ ERV KNFDM IV+KD+ K V
Sbjct: 819 PTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAIPVAS 878
Query: 666 XXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 711
KEWL++ D+KY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 879 LDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 924
Score = 245 (91.3 bits), Expect = 1.0e-115, Sum P(3) = 1.0e-115
Identities = 55/193 (28%), Positives = 102/193 (52%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ + + R+K LYS+W K + +Y + D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRKGEDEY-ANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVELMD 136
E +T+MVF +I F+ S+KK L + + ++A GA + + ++ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLIREKNESNKSSFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ A++ N G +G +++ G +++W D L GF D++ ++ AV
Sbjct: 120 KMIEAIKESKN-----GKKIGVFSKDKFPGEFMKSWNDCLNKEGFDKIDISAVVAYTIAV 174
Query: 197 KDQEEIMNVKKAA 209
K+ E+ +KKAA
Sbjct: 175 KEDGELNLMKKAA 187
Score = 85 (35.0 bits), Expect = 1.0e-115, Sum P(3) = 1.0e-115
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 772 GKTWAELEREATNADREKGDDSDSEEER---KRRKGKTFGKSRGPPSG 816
GK W ELE EA ADRE + + E+ R ++RK RG G
Sbjct: 987 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRG 1034
Score = 55 (24.4 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 529 QTLGGGKRSAYDPDEIEEEQRERARKNK 556
++LG + S D DE+EEE R+ R+++
Sbjct: 978 ESLGSEEESGKDWDELEEEARKADRESR 1005
Score = 53 (23.7 bits), Expect = 2.4e-112, Sum P(3) = 2.4e-112
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 775 WAELEREATNADREKGD-DSDSEEE 798
W+ LE E +D E+GD +S+ E+E
Sbjct: 922 WSFLEPEGEGSDAEEGDSESEIEDE 946
Score = 44 (20.5 bits), Expect = 2.2e-111, Sum P(3) = 2.2e-111
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 776 AELEREATNADREKGDDSDSEEERKRR 802
++ +E+ ++ E G D D EE R+
Sbjct: 973 SDYSKESLGSEEESGKDWDELEEEARK 999
Score = 40 (19.1 bits), Expect = 4.4e-15, Sum P(3) = 4.4e-15
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 789 KGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKRTK 823
K +D + EEE K G RG + +RT+
Sbjct: 433 KNEDEEEEEEEKDEAEDLLG--RGSRAALLTERTR 465
Score = 38 (18.4 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 369 DTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQEKLQ 428
+ N +K +I EV F + E+V A + +R +A E+A +EK
Sbjct: 179 ELNLMKKAASI-TSEV-FNKFFKERVMEIVDADEKVRHSKLAESVEKA------IEEKKY 230
Query: 429 LAG 431
LAG
Sbjct: 231 LAG 233
Score = 38 (18.4 bits), Expect = 7.0e-15, Sum P(3) = 7.0e-15
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 535 KRSAYDPDEIEEEQRERARKNKINM 559
+ S Y+ E EE+ R +RK K ++
Sbjct: 1002 RESRYE--EEEEQSRSMSRKRKASV 1024
>UNIPROTKB|F1S8K5 [details] [associations]
symbol:SUPT16H "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009987 "cellular process" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0009987 InterPro:IPR013719 Pfam:PF08512 OMA:MEIIDAD
InterPro:IPR013953 Pfam:PF08644 GeneTree:ENSGT00390000014495
EMBL:CT797461 Ensembl:ENSSSCT00000031400 Uniprot:F1S8K5
Length = 1048
Score = 841 (301.1 bits), Expect = 2.8e-115, Sum P(3) = 2.8e-115
Identities = 201/527 (38%), Positives = 300/527 (56%)
Query: 202 IMNVKKAAVKDVA-YSFNXXXXXXXRPKVKAE-ANGTEALPSKTTLRSDNQEISKEELRR 259
+ +VKK VK+V + N K +AE G + + T R+ N E++ EE RR
Sbjct: 418 LTSVKKK-VKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRN-EMTAEEKRR 475
Query: 260 QHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLP--P--RDLMIQ 315
HQ ELA Q NEE K ++YKN + L+P P R++ I
Sbjct: 476 AHQKELAAQLNEEAKRRLTEQKGEQQIQ----KARKSNVSYKNPS-LMPKEPHIREMKIY 530
Query: 316 IDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDTNSLKH 375
ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++ N +
Sbjct: 531 IDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT-YLRINFYCPGSALGRNEGNIFPN 589
Query: 376 QGAIYLKEVSFRSKDPRHIGE-VVGA---------IKTLRRQVMARESERAERATLVTQE 425
A ++KE+++R+ + + GE V A IK ++++ RE+E E+ +V Q+
Sbjct: 590 PEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQD 649
Query: 426 KLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIMFGNIK 485
L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI++ NIK
Sbjct: 650 SLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDILYNNIK 705
Query: 486 HAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPDEI- 544
HA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG + +D D++
Sbjct: 706 HALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HDRDDLY 764
Query: 545 EEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFI 604
E+Q ER ++K+ F++F+ +V L + +LEF+ P RDLGF+G P++++ +
Sbjct: 765 AEQQMEREMRHKLKTAFKNFIEKVEALTKE------ELEFEVPFRDLGFNGAPYRSTCLL 818
Query: 605 VPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXX 664
PTSS LV E P VVTL E+E+++ ERV KNFDM IV+KD+ K V
Sbjct: 819 QPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAIPVA 878
Query: 665 XXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 711
KEWL++ D+KY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 879 SLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 925
Score = 245 (91.3 bits), Expect = 2.8e-115, Sum P(3) = 2.8e-115
Identities = 55/193 (28%), Positives = 102/193 (52%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ + + R+K LYS+W K + +Y + D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKDAYYRRVKRLYSNWRKGEDEY-ANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVELMD 136
E +T+MVF +I F+ S+KK L + + ++A GA + + ++ K + D
Sbjct: 60 ELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLIREKNESNKSSFD 119
Query: 137 AIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAV 196
+ A++ N G +G +++ G +++W D L GF D++ ++ AV
Sbjct: 120 KMIEAIKESKN-----GKKIGVFSKDKFPGEFMKSWNDCLNKEGFDKIDISAVVAYTIAV 174
Query: 197 KDQEEIMNVKKAA 209
K+ E+ +KKAA
Sbjct: 175 KEDGELNLMKKAA 187
Score = 85 (35.0 bits), Expect = 2.8e-115, Sum P(3) = 2.8e-115
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 772 GKTWAELEREATNADREKGDDSDSEEER---KRRKGKTFGKSRGPPSG 816
GK W ELE EA ADRE + + E+ R ++RK RG G
Sbjct: 988 GKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRG 1035
Score = 55 (24.4 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 529 QTLGGGKRSAYDPDEIEEEQRERARKNK 556
++LG + S D DE+EEE R+ R+++
Sbjct: 979 ESLGSEEESGKDWDELEEEARKADRESR 1006
Score = 53 (23.7 bits), Expect = 6.4e-112, Sum P(3) = 6.4e-112
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 775 WAELEREATNADREKGD-DSDSEEE 798
W+ LE E +D E+GD +S+ E+E
Sbjct: 923 WSFLEPEGEGSDAEEGDSESEIEDE 947
Score = 44 (20.5 bits), Expect = 5.7e-111, Sum P(3) = 5.7e-111
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 776 AELEREATNADREKGDDSDSEEERKRR 802
++ +E+ ++ E G D D EE R+
Sbjct: 974 SDYSKESLGSEEESGKDWDELEEEARK 1000
Score = 40 (19.1 bits), Expect = 4.4e-15, Sum P(3) = 4.4e-15
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 789 KGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKRTK 823
K +D + EEE K G RG + +RT+
Sbjct: 433 KNEDEEEEEEEKDEAEDLLG--RGSRAALLTERTR 465
Score = 38 (18.4 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 369 DTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQEKLQ 428
+ N +K +I EV F + E+V A + +R +A E+A +EK
Sbjct: 179 ELNLMKKAASI-TSEV-FNKFFKERVMEIVDADEKVRHSKLAESVEKA------IEEKKY 230
Query: 429 LAG 431
LAG
Sbjct: 231 LAG 233
Score = 38 (18.4 bits), Expect = 7.0e-15, Sum P(3) = 7.0e-15
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 535 KRSAYDPDEIEEEQRERARKNKINM 559
+ S Y+ E EE+ R +RK K ++
Sbjct: 1003 RESRYE--EEEEQSRSMSRKRKASV 1025
>DICTYBASE|DDB_G0282677 [details] [associations]
symbol:spt16 "FACT complex subunit SPT16"
species:44689 "Dictyostelium discoideum" [GO:0009987 "cellular
process" evidence=IEA] [GO:0035101 "FACT complex" evidence=ISS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISS] [GO:0001672 "regulation of chromatin
assembly or disassembly" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000994 Pfam:PF00557
dictyBase:DDB_G0282677 GO:GO:0005694 GO:GO:0006355
EMBL:AAFI02000047 GenomeReviews:CM000152_GR GO:GO:0006260
GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10 SUPFAM:SSF55920
GO:GO:0001672 GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644 OMA:GARYKNY
RefSeq:XP_640196.1 ProteinModelPortal:Q54S43 STRING:Q54S43
EnsemblProtists:DDB0231753 GeneID:8623736 KEGG:ddi:DDB_G0282677
Uniprot:Q54S43
Length = 1072
Score = 863 (308.9 bits), Expect = 1.5e-110, Sum P(3) = 1.5e-110
Identities = 202/544 (37%), Positives = 308/544 (56%)
Query: 190 LSELFAVKDQ---EEIMNVKKAAVKDVAYSFNXXXXXXXR---PKVKAEA-NGTEALPSK 242
+S+ + D+ E + +V K A DV Y P VK E + + + +
Sbjct: 425 ISDTVLLNDEGKVEVLTDVGKKA-SDVVYMLGGEDDDDDNDNDPSVKLELPDDVKGITGR 483
Query: 243 TTLRSDNQEISKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKN 302
T + + + S EE RR HQ ++ QKN + K T + Y
Sbjct: 484 T-IETKEKSKSVEERRRDHQ-KMLEQKNLQEAENKIKAMTDPNG-----KKGTPEVDYTA 536
Query: 303 VNDLLP--------PRDLM---IQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRN 351
+ L P P+D++ + ID K E VLFPI+G MVPFH++TI+ +S ++
Sbjct: 537 ITKLQPIYSSVGAYPQDIVKNKMYIDPKKETVLFPIFGYMVPFHISTIKNISKSEE---- 592
Query: 352 CYIRIIFNVPGTPFNPH--DTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVM 409
YIR+ FN P T + D + Q +Y++EV+++ DP+ + + IK L+++
Sbjct: 593 -YIRVNFNTP-TSYTQEQIDAGFVPPQ-LMYIREVTYKVNDPKVLANNIRLIKELKKKFT 649
Query: 410 ARESERAERATLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFA 469
RE+E E+ L+TQEKL L +F P +L ++ RP G R I G LEAH NG RF
Sbjct: 650 TRETEDREKRNLITQEKLILLRGKF-P-RLPEVHARPTLSGARRTI-GILEAHENGIRFN 706
Query: 470 TSRPEER--VDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDV 527
+ ++R +D+++ NIKHA +Q A++E + ++HFHLH+ +M+G KKTKDVQFY+E+ ++
Sbjct: 707 PTSTKDRTPIDVLYKNIKHAIYQQADQESMAVIHFHLHDALMIGKKKTKDVQFYIEISEM 766
Query: 528 VQTLGGGKRSAYDPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQP 587
Q+L R ++ DE EEE+RERA K KIN DF++F+ RV ++ +P LEFD P
Sbjct: 767 SQSLDVSSR--FN-DEEEEERRERALKEKINNDFKTFIKRVEEIAPEP-----GLEFDVP 818
Query: 588 LRDLGFHGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIV 647
R+LGF+GVP+ ++ FI P+ CL+ ++E PF V+TL ++EI ER KNFD++ V
Sbjct: 819 YRELGFYGVPNVSTVFIQPSVHCLLSILEPPFFVLTLDDVEIACFERAIRSLKNFDLSFV 878
Query: 648 FKDFKKDVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDG 707
FKD+ + +R KEWLD+ +IK+Y+S N NW++I+ TI D + F DDG
Sbjct: 879 FKDYNRPPIRISVIPRNYFETVKEWLDSFNIKFYQSERNYNWKRIMDTIKSDVKKFHDDG 938
Query: 708 GWEF 711
GW F
Sbjct: 939 GWSF 942
Score = 203 (76.5 bits), Expect = 1.5e-110, Sum P(3) = 1.5e-110
Identities = 60/196 (30%), Positives = 94/196 (47%)
Query: 15 TGGANAYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNI 74
TG A +++ NF R+K LY WN S+ W SA+ L +A +E Y K ++L
Sbjct: 19 TGPREA-TLDAGNFCKRVKILYDSWNSD-SNLWKSANSLVLALGQPNESNPYQKVTSLQT 76
Query: 75 WLLGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADVV-IHVKAKTDDGVE 133
WL GYE +T++VF++K+I + + KK +L K S + V ++ I T D +
Sbjct: 77 WLFGYELKDTIIVFLEKEIYIVSTSKKINLFQ--KLSETEQVKTELSSIKFNFLTIDKSD 134
Query: 134 LMDAIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSEL 193
+ F + ++ +G +G I +ET G L W L D+T LS
Sbjct: 135 KNKSNFEKLIGEAT-KAGSN--IGVIIKETYIGDLALQWEAALNECPLTKVDITPALSSC 191
Query: 194 FAVKDQEEIMNVKKAA 209
VKD +E N+ +A
Sbjct: 192 LLVKDLQEQKNIITSA 207
Score = 60 (26.2 bits), Expect = 1.5e-110, Sum P(3) = 1.5e-110
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 771 KGKTWAELEREATNADREKGDDSDSEEERKRRKGKTFGKSRGPPS 815
+G+ W +LE++A D+ K D E +++R K+ S P S
Sbjct: 988 EGENWEDLEQKAERDDKMKTFD---ETNKRKRDEKSVSSSNRPSS 1029
Score = 40 (19.1 bits), Expect = 1.9e-108, Sum P(3) = 1.9e-108
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 775 WAELEREATNADREKGDD---SDSEE 797
W+ L+ E + + GDD S+S+E
Sbjct: 940 WSFLDLEEEEEEEDSGDDDYHSNSDE 965
>POMBASE|SPBP8B7.19 [details] [associations]
symbol:spt16 "FACT complex subunit Spt16" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006334
"nucleosome assembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=ISO] [GO:0035101 "FACT
complex" evidence=IDA] [GO:0043486 "histone exchange" evidence=IC]
[GO:0044732 "mitotic spindle pole body" evidence=IDA]
InterPro:IPR000994 Pfam:PF00557 PomBase:SPBP8B7.19 GO:GO:0006355
GO:GO:0044732 EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR
GO:GO:0006261 GO:GO:0000790 GO:GO:0006368 GO:GO:0043486
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0006334 GO:GO:0035101
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079
OMA:MEIIDAD InterPro:IPR013953 Pfam:PF08644 OrthoDB:EOG4QC4DF
PIR:T40813 RefSeq:NP_596526.1 PDB:3CB5 PDB:3CB6 PDBsum:3CB5
PDBsum:3CB6 ProteinModelPortal:O94267 SMR:O94267 DIP:DIP-44081N
STRING:O94267 EnsemblFungi:SPBP8B7.19.1 GeneID:2541355
KEGG:spo:SPBP8B7.19 EvolutionaryTrace:O94267 NextBio:20802464
Uniprot:O94267
Length = 1019
Score = 835 (299.0 bits), Expect = 8.2e-108, Sum P(3) = 8.2e-108
Identities = 180/512 (35%), Positives = 289/512 (56%)
Query: 212 DVAYSF---NXXXXXXXRPKVKAEANGTEALPS-KTTLRSDNQEI--SKEELRRQHQAEL 265
D++Y F + +P+ K GT + S K RS+ +++ S E+ R +HQ +L
Sbjct: 434 DISYFFGEDDSSLEDGVKPR-KPPTRGTATISSHKGKTRSETRDLDDSAEKRRVEHQKQL 492
Query: 266 ARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDLLPPR--DLMIQIDQKNEAV 323
A +K E T +YK + LP +L I +D + +++
Sbjct: 493 ASRKQAE--GLQRFAQGSVPSSGIEKPTVKRFESYKR-DSQLPQAIGELRILVDYRAQSI 549
Query: 324 LFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDTNSLKHQGAIYLKE 383
+ PI+G VPFH++T++ +S+ D Y+R+ F PG D + A +++
Sbjct: 550 ILPIFGRPVPFHISTLKN-ASKNDEGNFVYLRLNFVSPGQIGGKKDELPFEDPNAQFIRS 608
Query: 384 VSFRSKDPRHIGEVVGAIKTLRRQVMARESERAERATLVTQEKLQLAGNRFKPIKLHDLW 443
+FRS + + +V I+ +++ RE+ER E A ++ Q+KL N+ +P ++D++
Sbjct: 609 FTFRSSNNSRMSQVFKDIQDMKKAATKRETERKEFADVIEQDKLIEIKNK-RPAHINDVY 667
Query: 444 IRPVFGGRGRKIPGTLEAHLNGFRFATS-RPEERVDIMFGNIKHAFFQPAEKEMITLVHF 502
+RP G+ ++PG +E H NG R+ + R + +D++F N+KH FFQP E E+I L+H
Sbjct: 668 VRPAIDGK--RLPGFIEIHQNGIRYQSPLRSDSHIDLLFSNMKHLFFQPCEGELIVLIHV 725
Query: 503 HLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAY---DPDEIEEEQRERARKNKINM 559
HL IMVG +KT+DVQFY EV D+ G K+ Y D DE+E+EQ ER R+ +++
Sbjct: 726 HLKAPIMVGKRKTQDVQFYREVSDIQFDETGNKKRKYMYGDEDELEQEQEERRRRAQLDR 785
Query: 560 DFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIVPTSSCLVELIETPF 619
+F+SF ++ + G +E D P R+L F+GVP +++ + PT+ CLV+L +TPF
Sbjct: 786 EFKSFAEKIAEA-----SEGR-IELDIPFRELAFNGVPFRSNVLLQPTTDCLVQLTDTPF 839
Query: 620 LVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXXXXXXXKEWLDTTDIK 679
V+TL EIEI +LERV G KNFD+ +F+DF++ + KEWLD+ DI
Sbjct: 840 TVITLNEIEIAHLERVQFGLKNFDLVFIFQDFRRPPIHINTIPMEQLDNVKEWLDSCDIC 899
Query: 680 YYESRLNLNWRQILKTITDDPQSFIDDGGWEF 711
+YE LNLNW I+KT+ +DP +F ++GGW F
Sbjct: 900 FYEGPLNLNWTTIMKTVNEDPIAFFEEGGWGF 931
Score = 212 (79.7 bits), Expect = 8.2e-108, Sum P(3) = 8.2e-108
Identities = 62/201 (30%), Positives = 102/201 (50%)
Query: 21 YSINLENFSTRLKALYSHWNKHKSD---YWGSADVLAIATPPASEDLR-YLKSSALNIWL 76
Y I+ F RL L + W K++ D + D + + T A +D Y KS+AL+ WL
Sbjct: 4 YEIDEITFHKRLGILLTSW-KNEEDGKTLFQDCDSILV-TVGAHDDTNPYQKSTALHTWL 61
Query: 77 LGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADVVIHVKAK-TDDGVELM 135
LGYEFP T+++ K +I L S KA++L K + ADV I + K ++ +L
Sbjct: 62 LGYEFPSTLILLEKHRITILTSVNKANML--TKLAETKGAAADVNILKRTKDAEENKKLF 119
Query: 136 DAIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQ--NSGFQLSDVTNGLSEL 193
+ I +R+ + VG ++ +G+ + W + S F L D + GL++
Sbjct: 120 EKIIEYIRATNKK-------VGVFPKDKTQGKFINEWDSIFEPVKSEFNLVDASLGLAKC 172
Query: 194 FAVKDQEEIMNVKKAAVKDVA 214
A+KD++E+ N+K A+ VA
Sbjct: 173 LAIKDEQELANIKGASRVSVA 193
Score = 53 (23.7 bits), Expect = 8.2e-108, Sum P(3) = 8.2e-108
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 772 GKTWAELEREATNADREKGDDSDSEEERKRRK 803
G+ W ELER+A D K D + +KR +
Sbjct: 989 GEDWDELERKARQEDA-KHDAFEERPSKKRHR 1019
Score = 48 (22.0 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 771 KGKTWAELEREATNADREKGDDSDSEEERKRRKG-KTFGKSRGPPSGGFPKRTKLR 825
KGKT +E +A++ + + RK+ +G + F + PS G K T R
Sbjct: 467 KGKTRSETRDLDDSAEKRRVEHQKQLASRKQAEGLQRFAQG-SVPSSGIEKPTVKR 521
Score = 42 (19.8 bits), Expect = 1.2e-106, Sum P(3) = 1.2e-106
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 781 EATNADREKGDDSDSEEERKRRK 803
E+ D E G+D D E ERK R+
Sbjct: 980 ESEVEDEESGEDWD-ELERKARQ 1001
Score = 41 (19.5 bits), Expect = 7.0e-13, Sum P(4) = 7.0e-13
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 362 GTPFNPHDTNSLKHQGAIYLKE-VSFRSKDP 391
G NPH NS + A+ L + + DP
Sbjct: 392 GNLINPHPKNSQSKEYALLLIDTIQITRSDP 422
Score = 39 (18.8 bits), Expect = 2.4e-106, Sum P(3) = 2.4e-106
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 779 EREATNADREKGDDSDSEE 797
E EA++AD ++ +SEE
Sbjct: 949 EYEASDADPSDEEEEESEE 967
Score = 38 (18.4 bits), Expect = 7.0e-13, Sum P(4) = 7.0e-13
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 526 DVVQTLGGGKRSAYDPDEIEEEQRE 550
D V+ + + S DP + EEE+ E
Sbjct: 942 DSVEEVSEYEASDADPSDEEEEESE 966
>ASPGD|ASPL0000031805 [details] [associations]
symbol:AN5102 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0009987 "cellular
process" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0035101 "FACT complex" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
EMBL:BN001305 Gene3D:3.90.230.10 SUPFAM:SSF55920 EMBL:AACD01000088
InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406 HOGENOM:HOG000209079
InterPro:IPR013953 Pfam:PF08644 RefSeq:XP_662706.1 STRING:Q5B2X8
GeneID:2871397 KEGG:ani:AN5102.2 OMA:FENIKHV OrthoDB:EOG4QC4DF
Uniprot:Q5B2X8
Length = 1019
Score = 837 (299.7 bits), Expect = 7.2e-107, Sum P(3) = 7.2e-107
Identities = 180/478 (37%), Positives = 266/478 (55%)
Query: 241 SKTTLRSDNQ-EISK--EELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDL 297
++T LR++ ++++ E RR+HQ ELA +K +E K
Sbjct: 467 TRTKLRAERPTQVNEGAEARRREHQKELAAKKTKE--GLDRFAGTTGDDNGVTQKKFKRF 524
Query: 298 IAYKNVNDL-LPPRDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRI 356
+YK N L +DL + +D K V+ P+ G VPFH+ TI+ +S+ D Y+RI
Sbjct: 525 ESYKRDNQLPAKVKDLTVYVDHKASTVIVPVMGRPVPFHINTIKN-ASKSDEGEYAYLRI 583
Query: 357 IFNVPGTPFNPHDTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESERA 416
F PG D + A +L+ ++ RSKD +V I LR+ + RE E+
Sbjct: 584 NFLSPGQGVGRKDDQPFEDLSAHFLRNLTLRSKDNDRFAQVAQDITELRKNALRREQEKK 643
Query: 417 ERATLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEER 476
E +V Q+KL NR +P+KL D+++RP G+ ++PG +E H NG R+ + E
Sbjct: 644 EMEDVVEQDKLVEIRNR-RPVKLPDVYLRPPLDGK--RVPGEVEIHQNGLRYVSPFRNEH 700
Query: 477 VDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKR 536
VD++F N+KH FFQP E+I L+H HL IM+G +KT+D+QFY E ++ G +R
Sbjct: 701 VDVLFSNVKHLFFQPCAHELIVLIHVHLKTPIMIGKRKTRDIQFYREATEMQFDETGNRR 760
Query: 537 SAY---DPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGF 593
+ D +E E EQ ER R+ ++ +F++F ++ D G K G+D+ D P R++GF
Sbjct: 761 RKHRYGDEEEFEAEQEERRRRAALDREFKAFAEKIADA-G--KDEGVDV--DIPFREIGF 815
Query: 594 HGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKK 653
GVP++++ I PT+ LV+L E PFLV++L EIEI +LERV G KNFD+ VFKDF +
Sbjct: 816 TGVPNRSNVLIQPTTDALVQLTEPPFLVISLNEIEIAHLERVQFGLKNFDLVFVFKDFHR 875
Query: 654 DVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 711
+ K+WLD+ DI Y E LNLNW I+KT+ DP F DGGW F
Sbjct: 876 APVHINTIPVENLEGVKDWLDSVDIAYTEGPLNLNWTTIMKTVVSDPYGFFADGGWSF 933
Score = 176 (67.0 bits), Expect = 7.2e-107, Sum P(3) = 7.2e-107
Identities = 53/189 (28%), Positives = 95/189 (50%)
Query: 28 FSTRLKALYSHWNKHK---SDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGYEFPET 84
F RL + Y+ W K + +G A + I E Y K++A++ WLLGYEFP T
Sbjct: 12 FFNRLSSFYAAWKADKRSTNSVFGGAGSIIILMGKTDEANSYQKNNAIHFWLLGYEFPAT 71
Query: 85 VMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADVVIHVKAKTDDGVELMDAIFNAVRS 144
+ VF + + + + KKA L +K K + ++++ K + ++ L + + ++S
Sbjct: 72 LFVFTPEVMYVVTTAKKAKHLEPLK-GGK--IPVEILVTTKDQ-EEKTRLFEKCVDIIKS 127
Query: 145 QSNVDSGDGPIVGSIARETPEGRLLETWADRLQN--SG-FQLSDVTNGLSEL-FAVKDQE 200
N VG + R+T G +E W R+ SG + D++ LS F+VKD +
Sbjct: 128 AGNK-------VGILPRDTTTGPFVEDWK-RVYGKISGDVEEVDISPALSAACFSVKDTD 179
Query: 201 EIMNVKKAA 209
E+++++ A+
Sbjct: 180 ELVSIRNAS 188
Score = 78 (32.5 bits), Expect = 7.2e-107, Sum P(3) = 7.2e-107
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 772 GKTWAELEREATNADREKG-DDSDSEEERKR 801
G+ W ELE +A DRE G DD D ++RKR
Sbjct: 989 GEDWDELEHQAKKKDRESGLDDEDRGKKRKR 1019
Score = 39 (18.8 bits), Expect = 9.1e-103, Sum P(3) = 9.1e-103
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 784 NADR-EKGDDSDSEEERKRRKGKTFG 808
+AD E G+D D E + ++K + G
Sbjct: 982 SADEDESGEDWDELEHQAKKKDRESG 1007
>FB|FBgn0002183 [details] [associations]
symbol:dre4 "dre4" species:7227 "Drosophila melanogaster"
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0001672 "regulation of
chromatin assembly or disassembly" evidence=IMP] [GO:0035101 "FACT
complex" evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0032968 "positive
regulation of transcription elongation from RNA polymerase II
promoter" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005694 EMBL:AE014296
GO:GO:0022008 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
GO:GO:0003682 Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0032968
GO:GO:0001672 GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 OMA:GARYKNY EMBL:AF023269
EMBL:AF023270 EMBL:BT010116 EMBL:AB083008 PIR:T13928 PIR:T13929
RefSeq:NP_476610.2 RefSeq:NP_728686.2 UniGene:Dm.5723
ProteinModelPortal:Q8IRG6 SMR:Q8IRG6 STRING:Q8IRG6 PaxDb:Q8IRG6
EnsemblMetazoa:FBtr0072865 GeneID:38248 KEGG:dme:Dmel_CG1828
CTD:38248 FlyBase:FBgn0002183 InParanoid:Q8IRG6 OrthoDB:EOG40CFXV
GenomeRNAi:38248 NextBio:807718 Bgee:Q8IRG6 GermOnline:CG1828
Uniprot:Q8IRG6
Length = 1083
Score = 842 (301.5 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 219/656 (33%), Positives = 321/656 (48%)
Query: 189 GLSELFAVKDQEEIMNVKKAAVKDVAYSF--NXXXXXXXRPKVKAEANGTEALP-SK--T 243
G + L + +M K +K+V + K E GTE L SK
Sbjct: 405 GDTVLVGEQSPASVMTPSKKKIKNVGIFIKDDSDEEDVDDKKTAKEDQGTEILGRSKRNA 464
Query: 244 TLRSD-NQEISKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKN 302
L S EI+ EE R++HQ ELA+Q NE K + ++YK+
Sbjct: 465 VLESKLRNEINTEEKRKEHQRELAQQLNERAKDRLARQGNSKEVE----KVRKNTVSYKS 520
Query: 303 VNDL-LPP--RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFN 359
++ + P ++L + +D+K E V+ P++G VPFH++TI+ +S Q Y+RI F
Sbjct: 521 ISQMPREPEVKELKLYVDKKYETVIMPVFGIQVPFHISTIKNIS-QSVEGEYTYLRINFF 579
Query: 360 VPGTPFNPHDTNSLKHQGAIYLKEVSFRSKDPRHIGEVVGA-----------IKTLRRQV 408
PG ++ A ++KEV++RS + + GEV GA IK ++++
Sbjct: 580 HPGATMGRNEGGLYPQPEATFVKEVTYRSSNVKEHGEV-GAPSANLNNAFRLIKEVQKRF 638
Query: 409 MARESERAERATLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRF 468
RE+E E+ LV Q+ L L+ N+ P KL DL+IRP + ++ G+LEAH NGFR+
Sbjct: 639 KTREAEEREKEDLVKQDTLILSQNKGNP-KLKDLYIRPNIVTK--RMTGSLEAHSNGFRY 695
Query: 469 ATSRPEERVDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVV 528
+ R + +VDI++ NIK AFFQP + EMI L+HFHL IM G KK DVQFY EV ++
Sbjct: 696 ISVRGD-KVDILYNNIKSAFFQPCDGEMIILLHFHLKYAIMFGKKKHVDVQFYTEVGEIT 754
Query: 529 QTLGGGKRSAYDPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPL 588
LG + +D D++ EQ ER ++K+ F+SF +V + +EFD P
Sbjct: 755 TDLGKHQHM-HDRDDLAAEQAERELRHKLKTAFKSFCEKVETMTKSV------VEFDTPF 807
Query: 589 RDLGFHGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVF 648
R+LGF G P +++ + PTS LV L E P V+TL ++E+V+ ERV +NFDM VF
Sbjct: 808 RELGFPGAPFRSTVTLQPTSGSLVNLTEWPPFVITLDDVELVHFERVQFHLRNFDMIFVF 867
Query: 649 KDFKKDVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGG 708
K++ K V KEWL++ DI+Y E +LNW++I+KTITDDP+ F + GG
Sbjct: 868 KEYNKKVAMVNAIPMNMLDHVKEWLNSCDIRYSEGVQSLNWQKIMKTITDDPEGFFEQGG 927
Query: 709 WEFXX--XXXXXXXXXXXXXXXQGYEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 766
W F + Y P
Sbjct: 928 WTFLDPESGSEGENETAESEEDEAYNPTDAESDEESDEDSEYSEASEDSEESDEDLGSDE 987
Query: 767 XXXXKGKTWAELEREATNADREKGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKRT 822
GK W++LEREA DR + D + K R GK K G S P ++
Sbjct: 988 ES---GKDWSDLEREAAEEDR----NHDYAADDKPRNGKFDSKKHGKSSKHSPSKS 1036
Score = 214 (80.4 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 54/195 (27%), Positives = 97/195 (49%)
Query: 19 NAYSINLENFSTRLKALYSHWNKHK---SDYWGSADVLAIATPPASEDLRYLKSSALNIW 75
+++ ++ E F R+K LY+ W D + D + ++ ED+ Y KS AL +W
Sbjct: 2 SSFVLDKEAFVRRVKRLYTEWRAPSIGHDDALRNLDCI-MSIVGVEEDVMYSKSMALQLW 60
Query: 76 LLGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADVVIHVKAKTDDGVELM 135
LLGYE +T+ VF + FL S+KK L + ++ ++ + V+ +TD
Sbjct: 61 LLGYELTDTISVFCSDAVYFLTSKKKIEFLKQTQNITEEGF-PEINLLVRDRTDKDQGNF 119
Query: 136 DAIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFA 195
+ + A+++ S G +G A++ G E W L S F+ D++ ++ L
Sbjct: 120 EKLIKALQN-----SKKGKRLGVFAKDAYPGEFSEAWKKSLTASKFEHVDISTIIAYLMC 174
Query: 196 VKDQEEIMNVKKAAV 210
KD+ EI N++KA++
Sbjct: 175 PKDESEINNIRKASL 189
Score = 40 (19.1 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 377 GAIYLKEVSFRSKDPRHIGEVV 398
GA LK + K+P H G +V
Sbjct: 252 GAYSLKFSAVADKNPLHFGVIV 273
>WB|WBGene00018849 [details] [associations]
symbol:F55A3.3 species:6239 "Caenorhabditis elegans"
[GO:0009987 "cellular process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0051301 "cell
division" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005694 GO:GO:0006355 GO:GO:0006260
GO:GO:0018996 GO:GO:0006281 GO:GO:0006351 GO:GO:0000910
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0006997 GO:GO:0001703
EMBL:FO080793 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406
HOGENOM:HOG000209079 InterPro:IPR013953 Pfam:PF08644
RefSeq:NP_492821.1 ProteinModelPortal:Q9N5R9 SMR:Q9N5R9
STRING:Q9N5R9 PaxDb:Q9N5R9 EnsemblMetazoa:F55A3.3.1
EnsemblMetazoa:F55A3.3.2 GeneID:172984 KEGG:cel:CELE_F55A3.3
UCSC:F55A3.3 CTD:172984 WormBase:F55A3.3
GeneTree:ENSGT00390000014495 InParanoid:Q9N5R9 OMA:GARYKNY
NextBio:877797 Uniprot:Q9N5R9
Length = 1030
Score = 844 (302.2 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 213/654 (32%), Positives = 314/654 (48%)
Query: 177 QNSGFQLSDVTNGLSELFAVKDQ--EEIMNVK-KAAVKDVAYSFNXXXXXXXRPKVKAEA 233
+N G + +S+ VK++ EI+ K K+ +K F K +
Sbjct: 389 KNKGEKGKPAAIAISDTILVKEEGDNEILTEKAKSRLKSNVIKFKEEQENREAEKDNDQK 448
Query: 234 NGTEALPSKTTLRSDNQ-EISKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXK 292
L + + + EELR++ Q EL Q NE K
Sbjct: 449 KMLGRGQRSVVLTDQTRNKTTNEELRKERQKELGVQLNE----LAKARLSKQGGGTDEKK 504
Query: 293 TTTDLIAYKNVNDLLPPRD---LMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTN 349
+ ++YK D ++I +D+K ++V+ PI+G VPFH++ I+ S + +
Sbjct: 505 SKKSNVSYKTEERFPQDADVQKMLIFVDRKYDSVVVPIFGIPVPFHISMIKNCSQSVEGD 564
Query: 350 RNCYIRIIFNVPGTPFNPHDTNSLKHQGAIYLKEVSFRS---KD-------PRH-IGEVV 398
Y+RI F PG+ D+ H A Y+KE++FR+ KD P H +
Sbjct: 565 FT-YLRINFATPGSQVGK-DSGQFPHPLAHYMKELTFRASNIKDHHSDSTAPSHNLSTAF 622
Query: 399 GAIKTLRRQVMARESERAERATLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGT 458
IK ++++ E+E E+ V Q+KL L+ N+ P KL DL IRP ++I G+
Sbjct: 623 RLIKEMQKRFKTEEAEEREKEGAVKQDKLILSQNKLNP-KLKDLLIRPNI--IQKRITGS 679
Query: 459 LEAHLNGFRFATSRPEERVDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDV 518
LEAH NGFR+ TS +R+D+++ NIKHAFFQP + EMI L+HFHL N ++ G KK KDV
Sbjct: 680 LEAHTNGFRY-TSLRGDRIDVLYNNIKHAFFQPCDNEMIILLHFHLKNPVLWGKKKYKDV 738
Query: 519 QFYVEVMDVVQTLGGGKRSAYDPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFN 578
QFY EV ++ LG D D+++ EQ+ER + ++N F SF +V+ L
Sbjct: 739 QFYTEVGEITTDLGK-YHHMQDRDDMQSEQQEREMRRRLNAAFNSFCEKVSRLTND---- 793
Query: 579 GLDLEFDQPLRDLGFHGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLG 638
EFD P LGF GVP++++ + PT+SCLV L E P +VTL E+E+V+ ERV L
Sbjct: 794 --QFEFDSPFAGLGFFGVPYRSATTLKPTASCLVNLTEWPTFIVTLSEVELVHFERVSLQ 851
Query: 639 QKNFDMTIVFKDFKKDVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITD 698
KNFDM +FKD+K KEWL T DI Y E +LNW +++KTITD
Sbjct: 852 LKNFDMVFIFKDYKIKPQMVAQIPMSSIDKIKEWLHTCDIWYSEGIQSLNWAKVMKTITD 911
Query: 699 DPQSFIDDGGWEFXXXXXXXXXXXXXXXXXQGYEPXXXXXXXXXXXXXXXXXXXXXXXXX 758
D ++F ++GGW F Y+P
Sbjct: 912 DLEAFFEEGGWSFLNVESDNEEAMDDSDDSDAYDPEEEDASAGSGSESDEDESEGEETES 971
Query: 759 XXXXXXXXXXX-XKGKTWAELEREATNAD-REKGDDSDSEEERKRRKGKTFGKS 810
+GK W++LE EA NAD R + ++ + +RKR G S
Sbjct: 972 DDDDEGSLDSDESEGKDWSDLEEEAANADKRREVEEPSRDRDRKRPHSSKSGPS 1025
Score = 202 (76.2 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 55/188 (29%), Positives = 90/188 (47%)
Query: 23 INLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGYEFP 82
+N + F R + LY HW K +D G + ++A D Y K+SAL WL G+E
Sbjct: 8 LNKDLFFQRAERLYEHWEKG-AD--GLDSIKSLAFVYGETDNPYTKTSALFTWLFGHEIA 64
Query: 83 ETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADVVIHV-KAKTDDGVELMDAIFNA 141
+TV++ +K I L S +K G V + + V + + KTD + + +
Sbjct: 65 DTVLLLLKDHIYILGSNRKVEFFGSVTGDNQSSGKVPTVSTLLRDKTDKDAGNFEKLIDH 124
Query: 142 VRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFAVKDQEE 201
++S GD VG+ +E + +W L+ G +DVT + LFAVKD +E
Sbjct: 125 IKSAG----GD---VGNFVKEKFSSEFVSSWNKALEEGGVNKNDVTLAFTHLFAVKDDKE 177
Query: 202 IMNVKKAA 209
+ ++K+A
Sbjct: 178 MDLIRKSA 185
>CGD|CAL0005222 [details] [associations]
symbol:CDC68 species:5476 "Candida albicans" [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0008023 "transcription elongation factor complex"
evidence=IGI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IGI] [GO:0031298 "replication
fork protection complex" evidence=IEA] [GO:0005816 "spindle pole
body" evidence=IEA] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=IEA] [GO:0035101 "FACT complex" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0060261 "positive
regulation of transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0034401 "regulation of transcription by
chromatin organization" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0034724 "DNA replication-independent nucleosome
organization" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
InterPro:IPR000994 Pfam:PF00557 CGD:CAL0005222 GO:GO:0005694
GO:GO:0006260 GO:GO:0006281 GO:GO:0006368 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0008023 GO:GO:0032784 EMBL:AACQ01000084
EMBL:AACQ01000083 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5406
InterPro:IPR013953 Pfam:PF08644 EMBL:AF253047 RefSeq:XP_715540.1
RefSeq:XP_715596.1 ProteinModelPortal:Q5A1D5 STRING:Q5A1D5
GeneID:3642741 GeneID:3642787 KEGG:cal:CaO19.10402
KEGG:cal:CaO19.2884 Uniprot:Q5A1D5
Length = 1060
Score = 797 (285.6 bits), Expect = 2.3e-94, Sum P(3) = 2.3e-94
Identities = 183/501 (36%), Positives = 278/501 (55%)
Query: 229 VKAEANGTEALPSKTTLRSDN---QEISKEELRRQHQAELARQKNEETXXXXXXXXXXXX 285
+K E+ A+ K+ LR +N + + E+LR++ Q +L ++ +E
Sbjct: 487 LKLESTENTAI-LKSKLRHENTNADDANSEKLRQEIQIKLHEKRLQEGLARFSKADATDA 545
Query: 286 XXXX-XXKTTTDLIAYKNVNDLLPPRDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSS 344
K + + + + DL I ID KN+ ++ PI G VPFH+ + ++ S
Sbjct: 546 DDFKPIFKKYESYVRESQIPNSV--NDLKIHIDYKNQTIILPISGRPVPFHINSYKS-GS 602
Query: 345 QQDTNRNCYIRIIFNVPGTPFNPHDTNSLKHQGA---IYLKEVSFRSKDPRHIGEVVGAI 401
Q + Y+R+ FN PG N L ++ + +L+ ++ RS+D + + +V AI
Sbjct: 603 QNEEGDFTYLRLNFNSPGAGGNVTKKQELPYEDSPDNSFLRSITIRSRDRQRMVDVYKAI 662
Query: 402 KTLRRQVMARESERAERATLVTQEKL-QLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLE 460
+ L++ + RE E+ + A ++TQ L +L G+R K KL++++IRP +KI G L+
Sbjct: 663 QDLKKDSVKREQEKKQMADVITQANLIELKGSRVK--KLNNVFIRPT--PDTKKIGGVLQ 718
Query: 461 AHLNGFRFATS-------RPEERVDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNK 513
H NG R+ + + ++RVD++F NIKH FFQP + E+I L+H HL N IM+G +
Sbjct: 719 IHENGLRYQSQPQSQSNFKNDQRVDVLFSNIKHLFFQPCKDELIVLIHCHLKNPIMIGKR 778
Query: 514 KTKDVQFYVEVMDVVQTLGGGKRSAY---DPDEIEEEQRERARKNKINMDFQSFVNRVND 570
KT DVQFY E D+ GG++ Y D DE+++EQ ER RK ++ +F+ F + D
Sbjct: 779 KTFDVQFYREASDMAFDETGGRKRKYRYGDEDELQQEQEERRRKALLDKEFKGFAELIAD 838
Query: 571 LWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIV 630
+G+ ++ D P R+LGF GVP ++S VPT CLV+LI+ P+LVVTL EIEI
Sbjct: 839 -----SSHGM-VDLDIPFRELGFQGVPFRSSVLCVPTRDCLVQLIDPPYLVVTLEEIEIA 892
Query: 631 NLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWR 690
+LERV G KNFD+ VFKDF K V+ K WL DI E ++NLNW
Sbjct: 893 HLERVQFGLKNFDLVFVFKDFNKPVVHINTIPVELLEDVKSWLTDVDIPISEGQMNLNWV 952
Query: 691 QILKTITDDPQSFIDDGGWEF 711
QI+KT+ DP F DGGW F
Sbjct: 953 QIMKTVLADPYQFFIDGGWAF 973
Score = 118 (46.6 bits), Expect = 2.3e-94, Sum P(3) = 2.3e-94
Identities = 46/162 (28%), Positives = 74/162 (45%)
Query: 61 SEDLRYLKSSALNIWLLGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADV 120
S+D Y KS+ L WLLGYEF T + K+ F+ S+ K+ L + D
Sbjct: 38 SDDNTYKKSTVLQNWLLGYEFIHTAIYITDKKCIFITSEGKSKHLKHLTNQKPD------ 91
Query: 121 VIHVKAKTDDGVELMDAIF-NAVRSQSNVDSGDGPIVGSIARETPEGRLLETWA-----D 174
++ + +T D VE +F + + + +DS G I ++ +G+ ++ W D
Sbjct: 92 LVELWIRTKD-VEHNKQLFIKLLETMTKLDSK----YGKILKDKYDGKFIDEWNQILNDD 146
Query: 175 RLQNSG-----FQLS--DVTNGLSELFAVKDQEEIMNVKKAA 209
N+ LS D+ +S+ AVKD EE N K A+
Sbjct: 147 NNNNNNNTTNDHALSAVDLAVTVSQALAVKDSEEFNNTKIAS 188
Score = 57 (25.1 bits), Expect = 2.3e-94, Sum P(3) = 2.3e-94
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 772 GKTWAELEREATNADREKGDD 792
G+ W LER+A ADR G D
Sbjct: 1040 GEDWDALERKAAKADRNSGFD 1060
Score = 41 (19.5 bits), Expect = 2.9e-86, Sum P(3) = 2.9e-86
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 75 WLLGYEFPETVMVFMKK 91
WLLG EF ++ + K
Sbjct: 365 WLLGMEFRDSTFILNAK 381
>UNIPROTKB|Q5A1D5 [details] [associations]
symbol:SPT16 "FACT complex subunit SPT16" species:237561
"Candida albicans SC5314" [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IGI] [GO:0008023
"transcription elongation factor complex" evidence=IGI] [GO:0032784
"regulation of DNA-dependent transcription, elongation"
evidence=IGI] InterPro:IPR000994 Pfam:PF00557 CGD:CAL0005222
GO:GO:0005694 GO:GO:0006260 GO:GO:0006281 GO:GO:0006368
Gene3D:3.90.230.10 SUPFAM:SSF55920 GO:GO:0008023 GO:GO:0032784
EMBL:AACQ01000084 EMBL:AACQ01000083 InterPro:IPR013719 Pfam:PF08512
eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644 EMBL:AF253047
RefSeq:XP_715540.1 RefSeq:XP_715596.1 ProteinModelPortal:Q5A1D5
STRING:Q5A1D5 GeneID:3642741 GeneID:3642787 KEGG:cal:CaO19.10402
KEGG:cal:CaO19.2884 Uniprot:Q5A1D5
Length = 1060
Score = 797 (285.6 bits), Expect = 2.3e-94, Sum P(3) = 2.3e-94
Identities = 183/501 (36%), Positives = 278/501 (55%)
Query: 229 VKAEANGTEALPSKTTLRSDN---QEISKEELRRQHQAELARQKNEETXXXXXXXXXXXX 285
+K E+ A+ K+ LR +N + + E+LR++ Q +L ++ +E
Sbjct: 487 LKLESTENTAI-LKSKLRHENTNADDANSEKLRQEIQIKLHEKRLQEGLARFSKADATDA 545
Query: 286 XXXX-XXKTTTDLIAYKNVNDLLPPRDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSS 344
K + + + + DL I ID KN+ ++ PI G VPFH+ + ++ S
Sbjct: 546 DDFKPIFKKYESYVRESQIPNSV--NDLKIHIDYKNQTIILPISGRPVPFHINSYKS-GS 602
Query: 345 QQDTNRNCYIRIIFNVPGTPFNPHDTNSLKHQGA---IYLKEVSFRSKDPRHIGEVVGAI 401
Q + Y+R+ FN PG N L ++ + +L+ ++ RS+D + + +V AI
Sbjct: 603 QNEEGDFTYLRLNFNSPGAGGNVTKKQELPYEDSPDNSFLRSITIRSRDRQRMVDVYKAI 662
Query: 402 KTLRRQVMARESERAERATLVTQEKL-QLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLE 460
+ L++ + RE E+ + A ++TQ L +L G+R K KL++++IRP +KI G L+
Sbjct: 663 QDLKKDSVKREQEKKQMADVITQANLIELKGSRVK--KLNNVFIRPT--PDTKKIGGVLQ 718
Query: 461 AHLNGFRFATS-------RPEERVDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNK 513
H NG R+ + + ++RVD++F NIKH FFQP + E+I L+H HL N IM+G +
Sbjct: 719 IHENGLRYQSQPQSQSNFKNDQRVDVLFSNIKHLFFQPCKDELIVLIHCHLKNPIMIGKR 778
Query: 514 KTKDVQFYVEVMDVVQTLGGGKRSAY---DPDEIEEEQRERARKNKINMDFQSFVNRVND 570
KT DVQFY E D+ GG++ Y D DE+++EQ ER RK ++ +F+ F + D
Sbjct: 779 KTFDVQFYREASDMAFDETGGRKRKYRYGDEDELQQEQEERRRKALLDKEFKGFAELIAD 838
Query: 571 LWGQPKFNGLDLEFDQPLRDLGFHGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIV 630
+G+ ++ D P R+LGF GVP ++S VPT CLV+LI+ P+LVVTL EIEI
Sbjct: 839 -----SSHGM-VDLDIPFRELGFQGVPFRSSVLCVPTRDCLVQLIDPPYLVVTLEEIEIA 892
Query: 631 NLERVGLGQKNFDMTIVFKDFKKDVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWR 690
+LERV G KNFD+ VFKDF K V+ K WL DI E ++NLNW
Sbjct: 893 HLERVQFGLKNFDLVFVFKDFNKPVVHINTIPVELLEDVKSWLTDVDIPISEGQMNLNWV 952
Query: 691 QILKTITDDPQSFIDDGGWEF 711
QI+KT+ DP F DGGW F
Sbjct: 953 QIMKTVLADPYQFFIDGGWAF 973
Score = 118 (46.6 bits), Expect = 2.3e-94, Sum P(3) = 2.3e-94
Identities = 46/162 (28%), Positives = 74/162 (45%)
Query: 61 SEDLRYLKSSALNIWLLGYEFPETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADV 120
S+D Y KS+ L WLLGYEF T + K+ F+ S+ K+ L + D
Sbjct: 38 SDDNTYKKSTVLQNWLLGYEFIHTAIYITDKKCIFITSEGKSKHLKHLTNQKPD------ 91
Query: 121 VIHVKAKTDDGVELMDAIF-NAVRSQSNVDSGDGPIVGSIARETPEGRLLETWA-----D 174
++ + +T D VE +F + + + +DS G I ++ +G+ ++ W D
Sbjct: 92 LVELWIRTKD-VEHNKQLFIKLLETMTKLDSK----YGKILKDKYDGKFIDEWNQILNDD 146
Query: 175 RLQNSG-----FQLS--DVTNGLSELFAVKDQEEIMNVKKAA 209
N+ LS D+ +S+ AVKD EE N K A+
Sbjct: 147 NNNNNNNTTNDHALSAVDLAVTVSQALAVKDSEEFNNTKIAS 188
Score = 57 (25.1 bits), Expect = 2.3e-94, Sum P(3) = 2.3e-94
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 772 GKTWAELEREATNADREKGDD 792
G+ W LER+A ADR G D
Sbjct: 1040 GEDWDALERKAAKADRNSGFD 1060
Score = 41 (19.5 bits), Expect = 2.9e-86, Sum P(3) = 2.9e-86
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 75 WLLGYEFPETVMVFMKK 91
WLLG EF ++ + K
Sbjct: 365 WLLGMEFRDSTFILNAK 381
>SGD|S000003175 [details] [associations]
symbol:SPT16 "Subunit of the heterodimeric FACT complex
(Spt16p-Pob3p), which assoc" species:4932 "Saccharomyces
cerevisiae" [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IPI]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IDA]
[GO:0060261 "positive regulation of transcription initiation from
RNA polymerase II promoter" evidence=IGI;IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005658 "alpha DNA polymerase:primase complex"
evidence=IDA] [GO:0031298 "replication fork protection complex"
evidence=IDA] [GO:0035101 "FACT complex" evidence=IGI;IPI]
[GO:0008023 "transcription elongation factor complex" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IPI] [GO:0034401 "regulation of transcription by
chromatin organization" evidence=IMP] [GO:0006334 "nucleosome
assembly" evidence=IDA] [GO:0009987 "cellular process"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0034724 "DNA
replication-independent nucleosome organization" evidence=IDA]
InterPro:IPR000994 Pfam:PF00557 SGD:S000003175 EMBL:BK006941
GO:GO:0006281 GO:GO:0006261 GO:GO:0000790 GO:GO:0034401
GO:GO:0006368 GO:GO:0045899 EMBL:M27174 Gene3D:3.90.230.10
SUPFAM:SSF55920 GO:GO:0006334 GO:GO:0031298 GO:GO:0060261
GO:GO:0035101 InterPro:IPR013719 Pfam:PF08512 GO:GO:0034724
eggNOG:COG5406 HOGENOM:HOG000209079 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 OrthoDB:EOG4QC4DF EMBL:M73533
EMBL:Z72729 PIR:S18512 RefSeq:NP_011308.1 PDB:3BIP PDB:3BIQ
PDB:3BIT PDBsum:3BIP PDBsum:3BIQ PDBsum:3BIT
ProteinModelPortal:P32558 SMR:P32558 DIP:DIP-2546N IntAct:P32558
MINT:MINT-427889 STRING:P32558 PaxDb:P32558 PeptideAtlas:P32558
EnsemblFungi:YGL207W GeneID:852665 KEGG:sce:YGL207W CYGD:YGL207w
OMA:THEAVIS EvolutionaryTrace:P32558 NextBio:971957
Genevestigator:P32558 GermOnline:YGL207W Uniprot:P32558
Length = 1035
Score = 769 (275.8 bits), Expect = 3.3e-93, Sum P(3) = 3.3e-93
Identities = 194/621 (31%), Positives = 299/621 (48%)
Query: 183 LSDVTNGLSEL-FAVKDQEEIMNVKKAAVKDVAYSFNXXXXXXXRPKVKAEANGTEALPS 241
L++ T S++ F ++EE N KK++ S R K++ EA G
Sbjct: 433 LTNYTKAKSQISFYFNNEEEDNNKKKSSPATKVPSKPDRNSKILRTKLRGEARGGA---- 488
Query: 242 KTTLRSDNQEISKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYK 301
++ KE++R+++Q +L +K E+ + +Y
Sbjct: 489 --------EDAQKEQIRKENQKKL-HEKLEKNGLLRFSAADANGPDSEPRQYFKKYESYV 539
Query: 302 NVNDLLPP--RDLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFN 359
+ LP RDL I +D K++ ++ PIYG VPFH+ + + S+ + Y+R+ FN
Sbjct: 540 R-DSQLPTNIRDLRIHVDWKSQTIILPIYGRPVPFHINSYKN-GSKNEEGEYTYLRLNFN 597
Query: 360 VPGTPFN-PHDTNSLKHQGAI---YLKEVSFRSKDPRHIGEVVGAIKTLRRQVMARESER 415
PG+ L ++ + +++ ++ RSKD + E I L+++ RE ER
Sbjct: 598 SPGSSGGISKKVEELPYEESADNQFVRSITLRSKDGDRMSETFKQIADLKKEATKREQER 657
Query: 416 AERATLVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATS-RPE 474
A +V Q+KL + + +L +++RP +++P T+ H NG RF + R +
Sbjct: 658 KALADVVQQDKL-IENKTGRTKRLDQIFVRP--NPDTKRVPSTVFIHENGIRFQSPLRTD 714
Query: 475 ERVDIMFGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDV-VQTLGG 533
R+DI+F NIK+ FQ + E+I ++H HL N I++G KK +DVQFY E D+ V GG
Sbjct: 715 SRIDILFSNIKNLIFQSCKGELIVVIHIHLKNPILMGKKKIQDVQFYREASDMSVDETGG 774
Query: 534 GKRSA-----Y-DPDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQP 587
G+R Y D DE+E+EQ ER ++ ++ +F+ F + + + NGL L +
Sbjct: 775 GRRGQSRFRRYGDEDELEQEQEERRKRAALDKEFKYFADAIAEA-----SNGL-LTVENT 828
Query: 588 LRDLGFHGVPHKASAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIV 647
RDLGF GVP++++ F +PT+ CLV+LIE PFLV+ L E+EI LERV G KNFDM V
Sbjct: 829 FRDLGFQGVPNRSAVFCMPTTDCLVQLIEPPFLVINLEEVEICILERVQFGLKNFDMVFV 888
Query: 648 FKDFKKDVLRXXXXXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDG 707
+KDF K V K+WL DI Y S +NLNW I+K++ DDP F DG
Sbjct: 889 YKDFNKPVTHINTVPIESLDFLKQWLTDMDIPYTVSTINLNWATIMKSLQDDPYQFFLDG 948
Query: 708 GWEFXXXXXXXXXXXXXXXXXQGYEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 767
GW F YE
Sbjct: 949 GWNFLATGSDDEASDESEEEVSEYEASEDDVSDESAFSEDEEGSEVDDDISGDESEDYTG 1008
Query: 768 XXXK-GKTWAELEREATNADR 787
+ G+ W ELE++A ADR
Sbjct: 1009 DESEEGEDWDELEKKAARADR 1029
Score = 155 (59.6 bits), Expect = 3.3e-93, Sum P(3) = 3.3e-93
Identities = 46/184 (25%), Positives = 91/184 (49%)
Query: 22 SINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGYEF 81
+I+ + F R++ LYS +N ++ GS + L ++ + Y K++ L+ WLL YEF
Sbjct: 5 NIDFDVFKKRIELLYSKYN----EFEGSPNSLLFVLGSSNAENPYQKTTILHNWLLSYEF 60
Query: 82 PETVMVFMKKQIQFLCSQKKASLLGMVKRSAKDAVGADVVIHVKAKTDDGVELMDAIFNA 141
P T++ + ++ + S KA L KD + + + + + + EL +F+
Sbjct: 61 PATLIALVPGKVIIITSSAKAKHLQKAIDLFKDPE-SKITLELWQRNNKEPELNKKLFDD 119
Query: 142 VRSQSNVDSGDGPIVGSIARETPEGRLLE----TWADRLQNSGFQLSDVTNGLSELFAVK 197
V + N G VG +++ +G+ + W ++ + F + D++ GLS+++ VK
Sbjct: 120 VIALIN---SAGKTVGIPEKDSYQGKFMTEWNPVWEAAVKENEFNVIDISLGLSKVWEVK 176
Query: 198 DQEE 201
D E
Sbjct: 177 DVNE 180
Score = 47 (21.6 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 773 KTWAELEREATNADREKGDDSDSEEERKRRKGKTFGKSR 811
K A+L++EAT ++E+ +D ++ K + KT G+++
Sbjct: 641 KQIADLKKEATKREQERKALADVVQQDKLIENKT-GRTK 678
Score = 39 (18.8 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 780 REATNADREKGDDSDSEEERKRRK 803
R + R GD+ + E+E++ R+
Sbjct: 776 RRGQSRFRRYGDEDELEQEQEERR 799
Score = 37 (18.1 bits), Expect = 3.3e-93, Sum P(3) = 3.3e-93
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 783 TNADREKGDDSDSEEERKRR--KGKTF 807
T + E+G+D D E++ R +G F
Sbjct: 1007 TGDESEEGEDWDELEKKAARADRGANF 1033
Score = 37 (18.1 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 782 ATNADREKGDDSDSE 796
AT +D E D+S+ E
Sbjct: 954 ATGSDDEASDESEEE 968
>UNIPROTKB|Q9W603 [details] [associations]
symbol:supt16h "FACT complex subunit SPT16" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000994 Pfam:PF00557 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0006260 GO:GO:0006281 GO:GO:0006351
Gene3D:3.90.230.10 SUPFAM:SSF55920 InterPro:IPR013719 Pfam:PF08512
CTD:11198 HOVERGEN:HBG092544 InterPro:IPR013953 Pfam:PF08644
EMBL:AB004794 EMBL:BC072746 RefSeq:NP_001084166.1 UniGene:Xl.7983
ProteinModelPortal:Q9W603 PRIDE:Q9W603 GeneID:399345
KEGG:xla:399345 Xenbase:XB-GENE-979310 Uniprot:Q9W603
Length = 1035
Score = 836 (299.3 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 225/651 (34%), Positives = 340/651 (52%)
Query: 89 MKKQIQFLCSQKKASLLGMVKRSAKDAVGADVVI-HVKAKTDDGVELMDAIFNAVRSQSN 147
M++ FL Q + LL +K AK V++ VK + D LM I +
Sbjct: 299 MQENYNFLL-QLQEELLKELKHGAKICDAYQVIMDQVKKQKPD---LMSKITKTLGFAMG 354
Query: 148 VDSGDGPIVGSIARE--TPEGRLLETWAD--RLQNS-GFQLSDVTNGLSELFAVKDQEE- 201
++ +G +V + + +G + L N G + + T L V EE
Sbjct: 355 IEFREGSLVINNKNQYKLKKGMVFSVHLGLAELNNKMGKKPEEKTYALFVGDTVLVNEEG 414
Query: 202 ----IMNVKKAAVKDVA-YSFNXXXXXXXRPKVKAE---ANGTEALPSKTTLRSDNQEIS 253
+ NVKK VK+V + K +AE G+ A + T R+ N E++
Sbjct: 415 AATVLTNVKKK-VKNVGIFLKKEDEEEEEEEKDEAEDLLGRGSRAA-ALLTERTRN-EMT 471
Query: 254 KEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXKTTTDLIAYKNVNDL-LPP--R 310
EE RR HQ ELA Q N+E K ++YKN + + P R
Sbjct: 472 AEEKRRTHQKELATQLNDEAKRRLTEQKGGQQTM----KARKSNVSYKNASQVPKEPELR 527
Query: 311 DLMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDT 370
++ + ID+K E V+ P++G PFH+ATI+ +S + + Y+RI F PG+ ++
Sbjct: 528 EMKLYIDKKYETVIMPVFGISTPFHIATIKNISMSVEGDYT-YLRINFFCPGSALGRNEG 586
Query: 371 NSLKHQGAIYLKEVSFRSK------DPR----HIGEVVGAIKTLRRQVMARESERAERAT 420
N + A ++KE+++R+ DP ++ IK ++++ RE+E E+
Sbjct: 587 NIFPNPEATFVKEITYRASNVKTPGDPSVPSLNLQNAFRIIKEVQKRYKTREAEEKEKEG 646
Query: 421 LVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIM 480
+V Q+ L + NR P KL DL+IRP + ++ G+LEAH+NGFRF + R + +VDI+
Sbjct: 647 IVKQDSLVINLNRSNP-KLKDLYIRPNIAQK--RMQGSLEAHVNGFRFTSVRGD-KVDIL 702
Query: 481 FGNIKHAFFQPAEKEMITLVHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYD 540
+ NIKHA FQP + EMI ++HFHL N IM G K+ DVQFY EV ++ LG + +D
Sbjct: 703 YNNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHM-HD 761
Query: 541 PDEIEEEQRERARKNKINMDFQSFVNRVNDLWGQPKFNGLDLEFDQPLRDLGFHGVPHKA 600
D++ EQ ER ++K+ F++F+ +V L + DLEF+ P RDLGF+G P+++
Sbjct: 762 RDDLYAEQLEREMRHKLKTAFKNFIEKVESLTKE------DLEFEIPFRDLGFNGAPYRS 815
Query: 601 SAFIVPTSSCLVELIETPFLVVTLGEIEIVNLERVGLGQKNFDMTIVFKDFKKDVLRXXX 660
+ + PTSS LV E P VVTL E+E+V+ ERV KNFDM IV+K++ K V
Sbjct: 816 TCLLQPTSSSLVNTTEWPPFVVTLDEVELVHFERVQFHLKNFDMVIVYKEYGKKVTMINA 875
Query: 661 XXXXXXXXXKEWLDTTDIKYYESRLNLNWRQILKTITDDPQSFIDDGGWEF 711
KEWL++ DIKY E +LNW +I+KTI DDP+ F + GGW F
Sbjct: 876 IPMASLDPIKEWLNSCDIKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSF 926
Score = 213 (80.0 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 55/204 (26%), Positives = 104/204 (50%)
Query: 20 AYSINLENFSTRLKALYSHWNKHKSDYWGSADVLAIATPPASEDLRYLKSSALNIWLLGY 79
A +++ E + R+K + W K D + + D + ++ E++ Y KS+AL WL GY
Sbjct: 2 AVTLDKEAYYRRIKRFFGSWKKG-DDEFANVDAIVVSVG-VDEEIVYAKSTALQTWLFGY 59
Query: 80 EFPETVMVFMKKQIQFLCSQKKASLLGMVKRSA--KDAVGADVV-IHVKAKTDDGVE-LM 135
E +T+MVF +++I F+ S+KK L + + ++A G + + V+ K ++ +
Sbjct: 60 ELTDTIMVFCEEKILFMASKKKVEFLKQIANTKGNENANGTPAITLLVREKQNESNKGNF 119
Query: 136 DAIFNAVRSQSNVDSGDGPIVGSIARETPEGRLLETWADRLQNSGFQLSDVTNGLSELFA 195
D + A++ S G +G ++ G +++W D L F+ D++ ++ A
Sbjct: 120 DKMIEAIKV-----SKKGKRIGVFIKDKFPGDFMKSWYDILNKESFEKVDISASVAYTIA 174
Query: 196 VKDQEEIMNVKKAA--VKDVAYSF 217
VK++ E+ +KKAA DV F
Sbjct: 175 VKEEGELNLMKKAASITSDVFSKF 198
Score = 73 (30.8 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 21/52 (40%), Positives = 24/52 (46%)
Query: 772 GKTWAELEREATNADREKGDDSDSEEERKRRKGKTFGKSRGPPSGGFPKRTK 823
GK W ELE EA ADRE S EE +++ G K P KR K
Sbjct: 988 GKDWDELEEEARKADRE----SLYEEVEEQKSGNRKRKGHAPLPNPSKKRKK 1035
Score = 44 (20.5 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 525 MDVVQTLGGGKRSAYDPDEIEEEQRERARKN 555
+D ++ + S D DE+EEE R+ R++
Sbjct: 975 VDSEESADSEEESGKDWDELEEEARKADRES 1005
Score = 42 (19.8 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 781 EATNADREKGDDSDSEEERKRR 802
E+ +++ E G D D EE R+
Sbjct: 979 ESADSEEESGKDWDELEEEARK 1000
Score = 42 (19.8 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 9/29 (31%), Positives = 20/29 (68%)
Query: 771 KGKTWAELEREATN-ADREKGDDSDSEEE 798
+G + +EL+ E N ++ E+ ++ DS+E+
Sbjct: 938 EGDSESELDDETFNPSEDEEEEEEDSDED 966
Score = 41 (19.5 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 775 WAELEREATNADREKGDDSDSE 796
W+ LE + +D +GD S+SE
Sbjct: 924 WSFLEPDGEGSDAAEGD-SESE 944
Score = 41 (19.5 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 409 MARESERAERATLVTQEKLQLAGNR 433
+ E+ +A+R +L + + Q +GNR
Sbjct: 994 LEEEARKADRESLYEEVEEQKSGNR 1018
>WB|WBGene00018852 [details] [associations]
symbol:F55A3.7 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006997 "nucleus organization" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] InterPro:IPR000994 GO:GO:0009792 GO:GO:0018996
GO:GO:0000910 Gene3D:3.90.230.10 GO:GO:0006997 GO:GO:0001703
EMBL:FO080793 eggNOG:COG5406 InterPro:IPR013953 Pfam:PF08644
GeneTree:ENSGT00390000014495 RefSeq:NP_492820.3
ProteinModelPortal:Q9N5S0 SMR:Q9N5S0 STRING:Q9N5S0 PaxDb:Q9N5S0
EnsemblMetazoa:F55A3.7 GeneID:186272 KEGG:cel:CELE_F55A3.7
UCSC:F55A3.7 CTD:186272 WormBase:F55A3.7 InParanoid:Q9N5S0
NextBio:931258 Uniprot:Q9N5S0
Length = 450
Score = 238 (88.8 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
Identities = 65/185 (35%), Positives = 106/185 (57%)
Query: 312 LMIQIDQKNEAVLFPIYGSMVPFHVATIRTVSSQQDTNRNCYIRIIFNVPGTPFNPHDTN 371
++I +D+K ++V+ PI+G VPFH++ I+ S + + Y+RI F PG+ D+
Sbjct: 262 MLIFVDRKYDSVVVPIFGIPVPFHISMIKNCSQSVEGDLT-YLRINFATPGSQVGK-DSG 319
Query: 372 SLKHQGAIYLKEVSFRS---KD-------P-RHIGEVVGAIKTLRRQVMARESERAERAT 420
H A Y+KE +FR+ KD P R++ IK ++++ + E+E+ E+
Sbjct: 320 QFPHPLAHYMKEFTFRASNIKDHHSDSTAPSRNLSTAFRFIKEMQKRFKSEEAEQREKEG 379
Query: 421 LVTQEKLQLAGNRFKPIKLHDLWIRPVFGGRGRKIPGTLEAHLNGFRFATSRPEERVDIM 480
V Q+KL L+ N+ P KL+ L I P + I G+LEAH NGFR+ TS +R+D++
Sbjct: 380 AVKQDKLILSQNKLNP-KLN-LLICPNI--IQKLITGSLEAHTNGFRY-TSLRGDRIDVL 434
Query: 481 FGNIK 485
+ NIK
Sbjct: 435 YNNIK 439
Score = 160 (61.4 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
Identities = 44/163 (26%), Positives = 75/163 (46%)
Query: 48 GSADVLAIATPPASEDLRYLKSSALNIWLLGYEFPETVMVFMKKQIQFLCSQKKASLLGM 107
G + ++A D Y K+S L WL G+E +TV++ + I L S +K G
Sbjct: 12 GLDSIKSLAFVYGETDNPYTKTSELFTWLFGHEIADTVLLLLNDHIYILGSNRKVEFFGS 71
Query: 108 VKRSAKDAVGADVVIHV-KAKTDDGVELMDAIFNAVRSQSNVDSGDGPIVGSIARETPEG 166
V + + V + + KTD + + + ++S GD VG+ +E
Sbjct: 72 VTGDNQSSGKVPTVSTLLRDKTDKDAGNFEKLIDHIKSAG----GD---VGNFVKEKFSS 124
Query: 167 RLLETWADRLQNSGFQLSDVTNGLSELFAVKDQEEIMNVKKAA 209
+ +W L+ G +DVT + LFAVKD +E+ ++K+A
Sbjct: 125 EFVSSWNKALEEGGVNKNDVTLAFTHLFAVKDDKEMDLIRKSA 167
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 825 734 0.00087 121 3 11 22 0.42 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 19
No. of states in DFA: 625 (66 KB)
Total size of DFA: 370 KB (2182 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 66.03u 0.11s 66.14t Elapsed: 00:00:05
Total cpu time: 66.03u 0.12s 66.15t Elapsed: 00:00:05
Start: Tue May 21 01:31:41 2013 End: Tue May 21 01:31:46 2013