Query 003377
Match_columns 824
No_of_seqs 382 out of 1517
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 23:13:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003377.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003377hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ooi_A Histone-lysine N-methyl 100.0 4.9E-42 1.7E-46 355.1 16.3 174 598-807 51-229 (232)
2 3bo5_A Histone-lysine N-methyl 100.0 2.6E-41 8.8E-46 360.3 17.0 192 609-810 56-286 (290)
3 3ope_A Probable histone-lysine 100.0 9.3E-41 3.2E-45 343.2 18.3 187 574-808 20-212 (222)
4 3h6l_A Histone-lysine N-methyl 100.0 6.9E-39 2.4E-43 339.9 15.0 145 663-807 105-254 (278)
5 1mvh_A Cryptic LOCI regulator 100.0 3.5E-38 1.2E-42 337.5 16.0 146 662-807 124-295 (299)
6 3hna_A Histone-lysine N-methyl 100.0 5E-38 1.7E-42 334.6 13.1 154 638-807 120-286 (287)
7 1ml9_A Histone H3 methyltransf 100.0 3E-37 1E-41 330.4 13.4 146 662-807 120-299 (302)
8 2r3a_A Histone-lysine N-methyl 100.0 2.4E-36 8.1E-41 323.6 14.2 146 662-807 127-297 (300)
9 2w5y_A Histone-lysine N-methyl 100.0 3.7E-34 1.3E-38 288.9 11.5 145 663-807 40-189 (192)
10 3f9x_A Histone-lysine N-methyl 100.0 2.5E-32 8.5E-37 267.0 12.4 131 664-794 19-155 (166)
11 2f69_A Histone-lysine N-methyl 99.9 7.9E-28 2.7E-32 253.1 13.1 117 674-794 108-235 (261)
12 1h3i_A Histone H3 lysine 4 spe 99.9 4.1E-26 1.4E-30 242.3 11.4 117 674-794 162-289 (293)
13 1n3j_A A612L, histone H3 lysin 99.9 1.3E-26 4.4E-31 216.0 6.3 107 674-793 3-109 (119)
14 2qpw_A PR domain zinc finger p 99.9 4E-26 1.4E-30 222.0 7.7 117 663-793 18-145 (149)
15 3s8p_A Histone-lysine N-methyl 99.9 1.1E-23 3.7E-28 222.6 2.1 128 676-808 132-267 (273)
16 3rq4_A Histone-lysine N-methyl 99.8 4.5E-21 1.5E-25 200.4 4.5 115 683-803 116-233 (247)
17 3ep0_A PR domain zinc finger p 99.8 1.5E-19 5.1E-24 179.4 8.4 112 672-793 24-147 (170)
18 3db5_A PR domain zinc finger p 99.8 1.8E-18 6E-23 168.5 10.1 121 663-792 12-142 (151)
19 3dal_A PR domain zinc finger p 99.7 9.5E-19 3.2E-23 177.2 6.3 110 671-790 54-174 (196)
20 3ray_A PR domain-containing pr 99.6 2.2E-15 7.7E-20 156.1 8.1 106 671-790 68-183 (237)
21 3ihx_A PR domain zinc finger p 99.5 5.1E-15 1.8E-19 144.5 5.9 102 673-790 21-139 (152)
22 3qwp_A SET and MYND domain-con 98.2 5.4E-07 1.8E-11 100.4 4.5 44 745-792 200-243 (429)
23 3n71_A Histone lysine methyltr 98.2 5.8E-07 2E-11 102.0 4.7 44 746-791 200-254 (490)
24 3qww_A SET and MYND domain-con 98.0 2E-06 6.9E-11 96.2 4.2 43 746-792 201-243 (433)
25 2llk_A Cyclin-D-binding MYB-li 96.8 0.00069 2.3E-08 58.6 3.2 52 168-222 17-68 (73)
26 3qxy_A N-lysine methyltransfer 96.2 0.0026 8.9E-08 71.5 4.1 42 746-791 222-263 (449)
27 2cqr_A RSGI RUH-043, DNAJ homo 96.1 0.0054 1.8E-07 53.0 4.7 54 169-222 13-68 (73)
28 2h21_A Ribulose-1,5 bisphospha 96.1 0.0027 9.3E-08 70.7 3.6 44 748-791 191-241 (440)
29 2lr8_A CAsp8-associated protei 94.0 0.004 1.4E-07 53.1 0.0 47 176-222 16-62 (70)
30 2din_A Cell division cycle 5-l 94.8 0.02 6.9E-07 47.7 3.8 52 169-223 4-55 (66)
31 3smt_A Histone-lysine N-methyl 94.7 0.017 5.7E-07 65.9 4.0 41 747-790 273-313 (497)
32 2cu7_A KIAA1915 protein; nucle 94.7 0.035 1.2E-06 47.1 5.0 54 170-226 5-59 (72)
33 2yqk_A Arginine-glutamic acid 94.5 0.05 1.7E-06 45.4 5.3 44 457-501 9-52 (63)
34 2elk_A SPCC24B10.08C protein; 94.4 0.025 8.4E-07 46.3 3.2 45 174-220 9-55 (58)
35 2yum_A ZZZ3 protein, zinc fing 94.3 0.033 1.1E-06 47.6 4.0 53 170-222 4-61 (75)
36 2eqr_A N-COR1, N-COR, nuclear 94.3 0.057 2E-06 44.6 5.3 43 457-501 12-54 (61)
37 2crg_A Metastasis associated p 94.3 0.054 1.9E-06 46.2 5.3 44 457-501 8-51 (70)
38 3sjm_A Telomeric repeat-bindin 94.3 0.025 8.7E-07 47.4 3.1 49 173-223 10-61 (64)
39 1guu_A C-MYB, MYB proto-oncoge 94.2 0.031 1.1E-06 44.3 3.3 46 174-221 3-49 (52)
40 1x41_A Transcriptional adaptor 93.8 0.036 1.2E-06 45.5 3.1 48 173-222 7-55 (60)
41 2d9a_A B-MYB, MYB-related prot 93.6 0.037 1.2E-06 45.3 2.8 51 170-222 4-55 (60)
42 1w0t_A Telomeric repeat bindin 93.0 0.059 2E-06 43.1 3.1 47 174-222 2-51 (53)
43 2cqq_A RSGI RUH-037, DNAJ homo 92.9 0.058 2E-06 46.4 3.1 50 174-223 8-58 (72)
44 3osg_A MYB21; transcription-DN 92.8 0.065 2.2E-06 50.1 3.6 51 170-223 58-109 (126)
45 2cjj_A Radialis; plant develop 92.8 0.063 2.2E-06 48.4 3.3 50 174-223 8-59 (93)
46 2k9n_A MYB24; R2R3 domain, DNA 92.7 0.095 3.2E-06 47.6 4.5 50 171-223 50-100 (107)
47 1gv2_A C-MYB, MYB proto-oncoge 92.7 0.064 2.2E-06 48.3 3.3 51 170-223 52-103 (105)
48 1ug2_A 2610100B20RIK gene prod 92.2 0.074 2.5E-06 47.7 2.8 48 176-223 35-83 (95)
49 1gvd_A MYB proto-oncogene prot 92.0 0.068 2.3E-06 42.4 2.2 46 174-221 3-49 (52)
50 2iw5_B Protein corest, REST co 90.9 0.21 7.2E-06 51.6 5.1 44 457-502 133-176 (235)
51 2yus_A SWI/SNF-related matrix- 90.9 0.068 2.3E-06 46.6 1.2 47 173-222 17-64 (79)
52 1h8a_C AMV V-MYB, MYB transfor 90.5 0.12 4.1E-06 48.3 2.7 51 170-223 75-126 (128)
53 1ity_A TRF1; helix-turn-helix, 90.4 0.15 5.1E-06 42.8 2.9 51 171-223 7-60 (69)
54 4a69_C Nuclear receptor corepr 89.8 0.39 1.3E-05 43.1 5.3 43 457-501 43-85 (94)
55 2dim_A Cell division cycle 5-l 89.2 0.21 7.2E-06 42.0 2.9 48 173-222 8-56 (70)
56 3h6l_A Histone-lysine N-methyl 88.7 0.2 6.9E-06 53.1 3.0 37 576-612 63-110 (278)
57 2k9n_A MYB24; R2R3 domain, DNA 88.3 0.25 8.6E-06 44.8 2.9 45 174-220 1-46 (107)
58 3zqc_A MYB3; transcription-DNA 88.1 0.37 1.3E-05 45.2 4.1 52 170-224 50-102 (131)
59 1gv2_A C-MYB, MYB proto-oncoge 87.5 0.23 7.9E-06 44.6 2.2 46 174-221 4-50 (105)
60 2ltp_A Nuclear receptor corepr 86.9 0.12 4.2E-06 45.8 0.0 51 170-223 12-63 (89)
61 2yus_A SWI/SNF-related matrix- 86.9 1 3.5E-05 39.1 5.8 43 457-501 18-60 (79)
62 2cu7_A KIAA1915 protein; nucle 86.6 1.2 4.2E-05 37.6 6.0 40 457-498 9-48 (72)
63 1x41_A Transcriptional adaptor 86.4 1.2 4E-05 36.4 5.6 40 457-498 8-48 (60)
64 1h89_C C-MYB, MYB proto-oncoge 85.9 0.34 1.2E-05 46.7 2.6 51 170-223 106-157 (159)
65 1h8a_C AMV V-MYB, MYB transfor 85.1 0.52 1.8E-05 43.9 3.3 53 168-222 21-74 (128)
66 3osg_A MYB21; transcription-DN 84.9 0.42 1.4E-05 44.6 2.6 47 172-221 9-56 (126)
67 2elk_A SPCC24B10.08C protein; 84.8 1.2 4E-05 36.3 4.9 40 457-498 9-50 (58)
68 2yum_A ZZZ3 protein, zinc fing 84.5 1.3 4.4E-05 37.6 5.2 40 457-498 8-53 (75)
69 1guu_A C-MYB, MYB proto-oncoge 82.0 2 6.9E-05 33.7 5.1 40 457-498 3-43 (52)
70 2xag_B REST corepressor 1; ami 80.5 1.6 5.4E-05 49.7 5.4 44 457-502 380-423 (482)
71 2d9a_A B-MYB, MYB-related prot 79.0 3.2 0.00011 33.6 5.4 40 457-498 8-48 (60)
72 1ign_A Protein (RAP1); RAP1,ye 78.0 0.86 3E-05 47.5 2.1 51 173-223 7-61 (246)
73 1x58_A Hypothetical protein 49 77.3 1.1 3.8E-05 37.6 2.2 49 173-223 7-58 (62)
74 2cqr_A RSGI RUH-043, DNAJ homo 76.4 4 0.00014 35.0 5.5 43 455-499 16-62 (73)
75 1h89_C C-MYB, MYB proto-oncoge 75.9 1.5 5.1E-05 42.3 3.0 50 171-222 55-105 (159)
76 1gvd_A MYB proto-oncogene prot 75.6 3.5 0.00012 32.4 4.6 40 457-498 3-43 (52)
77 1mvh_A Cryptic LOCI regulator 74.5 1.7 5.8E-05 46.4 3.3 37 577-613 67-131 (299)
78 3zqc_A MYB3; transcription-DNA 73.5 0.67 2.3E-05 43.4 -0.1 42 175-218 3-45 (131)
79 2dim_A Cell division cycle 5-l 73.4 5.5 0.00019 33.2 5.6 40 457-498 9-49 (70)
80 1ofc_X ISWI protein; nuclear p 73.3 1.5 5.2E-05 47.1 2.6 49 173-221 211-273 (304)
81 2ckx_A NGTRF1, telomere bindin 71.8 2.1 7.1E-05 37.7 2.7 47 176-223 2-52 (83)
82 2y9y_A Imitation switch protei 71.6 2.6 9E-05 46.5 4.0 48 174-221 228-289 (374)
83 3hna_A Histone-lysine N-methyl 71.3 1.7 5.9E-05 46.1 2.4 39 575-613 79-141 (287)
84 1w0t_A Telomeric repeat bindin 71.1 4.4 0.00015 32.0 4.2 29 458-486 3-32 (53)
85 2ltp_A Nuclear receptor corepr 73.3 0.88 3E-05 40.3 0.0 42 457-500 16-57 (89)
86 1wgx_A KIAA1903 protein; MYB D 70.0 2.2 7.5E-05 36.8 2.3 47 176-222 10-58 (73)
87 1ity_A TRF1; helix-turn-helix, 68.9 4.9 0.00017 33.5 4.3 43 457-501 10-58 (69)
88 2llk_A Cyclin-D-binding MYB-li 68.1 3.8 0.00013 35.2 3.4 40 456-498 22-61 (73)
89 2aje_A Telomere repeat-binding 67.8 4.4 0.00015 37.2 4.0 50 173-223 12-65 (105)
90 3sjm_A Telomeric repeat-bindin 67.5 8.3 0.00029 32.0 5.3 45 457-501 11-59 (64)
91 2din_A Cell division cycle 5-l 67.4 6.7 0.00023 32.3 4.8 39 456-497 8-46 (66)
92 2juh_A Telomere binding protei 65.5 3.8 0.00013 38.5 3.2 50 172-222 15-68 (121)
93 2roh_A RTBP1, telomere binding 61.7 4 0.00014 38.5 2.6 50 173-223 30-83 (122)
94 3qww_A SET and MYND domain-con 60.2 5.3 0.00018 44.4 3.7 30 675-704 7-36 (433)
95 3bo5_A Histone-lysine N-methyl 59.9 5.6 0.00019 42.2 3.7 21 575-595 58-80 (290)
96 2cjj_A Radialis; plant develop 57.4 15 0.0005 32.9 5.4 42 457-500 8-53 (93)
97 3n71_A Histone lysine methyltr 57.2 6.3 0.00021 44.6 3.7 31 674-704 6-36 (490)
98 3qwp_A SET and MYND domain-con 52.6 8.7 0.0003 42.5 3.8 30 674-703 4-33 (429)
99 3ope_A Probable histone-lysine 51.8 6.4 0.00022 40.0 2.4 30 584-613 37-67 (222)
100 2xag_B REST corepressor 1; ami 51.4 3.1 0.00011 47.3 0.0 42 458-501 190-231 (482)
101 2xus_A Breast cancer metastasi 50.7 11 0.00038 30.2 3.0 31 22-52 13-43 (49)
102 2eqr_A N-COR1, N-COR, nuclear 50.0 13 0.00043 30.4 3.4 47 173-222 11-58 (61)
103 1ml9_A Histone H3 methyltransf 49.7 6.7 0.00023 41.7 2.2 19 576-594 47-68 (302)
104 2lua_A Protein MALE-specific l 49.4 8.1 0.00028 31.2 2.1 19 620-638 19-37 (52)
105 1wgx_A KIAA1903 protein; MYB D 42.7 40 0.0014 29.0 5.5 44 456-501 7-54 (73)
106 1pft_A TFIIB, PFTFIIBN; N-term 39.0 29 0.00099 27.0 3.8 35 144-179 12-50 (50)
107 1x58_A Hypothetical protein 49 38.9 24 0.00081 29.6 3.4 28 457-484 8-35 (62)
108 3smt_A Histone-lysine N-methyl 37.2 17 0.00058 41.3 3.1 32 676-707 94-125 (497)
109 1fex_A TRF2-interacting telome 36.4 20 0.00068 29.4 2.6 46 174-219 2-55 (59)
110 2cqq_A RSGI RUH-037, DNAJ homo 34.9 79 0.0027 26.8 6.1 42 457-501 8-53 (72)
111 3hm5_A DNA methyltransferase 1 32.6 34 0.0012 30.7 3.6 46 175-223 31-82 (93)
112 3lcn_C MRNA transport factor G 31.2 62 0.0021 23.0 3.9 21 27-47 4-24 (29)
113 3qxy_A N-lysine methyltransfer 30.3 29 0.00099 38.7 3.5 33 675-707 38-71 (449)
114 3i9v_2 NADH-quinone oxidoreduc 28.8 36 0.0012 33.8 3.5 37 183-222 29-66 (181)
115 2ckx_A NGTRF1, telomere bindin 26.7 70 0.0024 27.9 4.5 27 459-485 2-29 (83)
116 3ooi_A Histone-lysine N-methyl 26.6 22 0.00074 36.3 1.5 55 558-612 16-85 (232)
117 2iw5_B Protein corest, REST co 23.9 47 0.0016 34.5 3.3 46 174-222 133-179 (235)
118 1wvo_A Sialic acid synthase; a 22.2 27 0.00093 30.1 1.1 18 772-789 8-25 (79)
119 1ofc_X ISWI protein; nuclear p 22.2 62 0.0021 34.8 4.0 44 457-502 110-154 (304)
No 1
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=100.00 E-value=4.9e-42 Score=355.13 Aligned_cols=174 Identities=32% Similarity=0.566 Sum_probs=156.4
Q ss_pred cCCCCCCCcccccccCCcccCCCCccCCCcccccccCccCcccCCCCcccCCCCCCCCCCCCCCCCCCchhhhhcccccE
Q 003377 598 CEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQRI 677 (824)
Q Consensus 598 Ce~~CgC~~~C~nRf~GC~C~~~~C~t~~CpC~~a~rECdPd~C~~C~~sCg~g~l~~p~~~~~~~C~N~~lqrg~~~~l 677 (824)
++..|+|+.+|.||+. ..||+|..|. |+ ..|+|+.+|++...+|
T Consensus 51 ~~~~C~~~~~C~nr~~-------------------~~EC~~~~C~-c~----------------~~C~Nr~~q~~~~~~l 94 (232)
T 3ooi_A 51 DENPCGIDSECINRML-------------------LYECHPTVCP-AG----------------GRCQNQCFSKRQYPEV 94 (232)
T ss_dssp SSSTTCTTSCCHHHHT-------------------TBCCCTTTCT-TG----------------GGCCCCHHHHTCCCCE
T ss_pred CCCCCCCCCCCcCcCc-------------------eeEeCCCCCC-CC----------------CCcCCccccCCCCccE
Confidence 3667999999999975 5788887665 32 3799999999999999
Q ss_pred EEEecCCCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhccc--CCcccccCCCcEEEeccccCCccccccCCCC
Q 003377 678 LLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRA--NSSFLFDLNDQYVLDAYRKGDKLKFANHSSN 755 (824)
Q Consensus 678 ~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~--~~sYlf~L~~~~~IDA~~~GN~aRFINHSC~ 755 (824)
+|++++.+||||||+++|++|+||+||+||||+..++++|...+... ...|+|.++.+++|||+.+||++|||||||+
T Consensus 95 ev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNHSC~ 174 (232)
T 3ooi_A 95 EIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHCCQ 174 (232)
T ss_dssp EEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEEEEEECGGGGCEECSS
T ss_pred EEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCceeeeecCcceEEeccccccccccccccCC
Confidence 99999999999999999999999999999999999999997766543 3578899999999999999999999999999
Q ss_pred CCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCC---CCCCcccCCCCCCC
Q 003377 756 PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP---DQAPAWARKPEGSK 807 (824)
Q Consensus 756 PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy~~---d~~pcwCg~pe~~k 807 (824)
|||.++.|.+++.++|+|||+|||++||||||||++.. ...+|+||.++|+.
T Consensus 175 PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~CrG 229 (232)
T 3ooi_A 175 PNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSG 229 (232)
T ss_dssp CSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTCTTCBCCCCCTTCCS
T ss_pred CCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCCCCCcEeECCCCcCcC
Confidence 99999999999999999999999999999999998654 45799999999874
No 2
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=360.34 Aligned_cols=192 Identities=24% Similarity=0.488 Sum_probs=170.4
Q ss_pred ccccCCcccCCCCccCCCcccccccCccCcccCC--------------CCcccCCCCCCCCCCCCCCCCCCchhhhhccc
Q 003377 609 KNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCR--------------NCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQ 674 (824)
Q Consensus 609 ~nRf~GC~C~~~~C~t~~CpC~~a~rECdPd~C~--------------~C~~sCg~g~l~~p~~~~~~~C~N~~lqrg~~ 674 (824)
.++|+||.|..+.|.+..|+|++.+.+|+++.|. +|+..|+|+ ..|+|+.+|++.+
T Consensus 56 ~~~~~gC~C~~~~C~~~~C~C~~~~~~y~~~~~l~~~~~~~~~~~~~~EC~~~C~C~----------~~C~Nr~~q~g~~ 125 (290)
T 3bo5_A 56 QITFPGCICVKTPCLPGTCSCLRHGENYDDNSCLRDIGSGGKYAEPVFECNVLCRCS----------DHCRNRVVQKGLQ 125 (290)
T ss_dssp SCCCCCCCCCSSCCCTTTCGGGTTSCSBCTTSCBCC-----CCCCCEECCCTTCCSC----------TTCTTCCGGGCCC
T ss_pred cccCCCCCCCCCCcCCCCCcchhhcCccCccccccccccccccCCceEeCCCCCCCC----------CCCCCeEcccCCc
Confidence 4578999998889999999999999999988764 577778775 4899999999999
Q ss_pred ccEEEEecCCCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCCC--------cEEEeccccCCc
Q 003377 675 QRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLND--------QYVLDAYRKGDK 746 (824)
Q Consensus 675 ~~l~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~~--------~~~IDA~~~GN~ 746 (824)
.+|+|++++.+||||||+++|++|+||+||+||||+..|+++|...|+....+|+|.+.. .++|||+.+||+
T Consensus 126 ~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~Y~~~l~~~~~~~~~~~~~IDa~~~GN~ 205 (290)
T 3bo5_A 126 FHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQTKSDSNYIIAIREHVYNGQVMETFVDPTYIGNI 205 (290)
T ss_dssp SCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTTCCSSCCCCCEEEEECC-----EEEEEEEEEEECG
T ss_pred ccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHhhcccCCcceeeecccccCCccceeEEeeeecCCc
Confidence 999999999999999999999999999999999999999999988887777889998753 378999999999
Q ss_pred cccccCCCCCCcceeEEEEcC-eeEEEEEEccCCCCCCeEEEecCCCC----------------CCCCcccCCCCCCCCC
Q 003377 747 LKFANHSSNPNCFAKVMLVAG-DHRVGIFAKEHIEASEELFYDYRYGP----------------DQAPAWARKPEGSKRE 809 (824)
Q Consensus 747 aRFINHSC~PNc~~~~v~V~G-~~rI~~fA~RDI~aGEELTfDYgy~~----------------d~~pcwCg~pe~~k~d 809 (824)
+|||||||+|||.++.|.+++ .++|+|||+|||++||||||||++.. ...+|+||.++|+..-
T Consensus 206 arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~~~~~C~CGs~~CrG~l 285 (290)
T 3bo5_A 206 GRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLNLTVSASKERLDHGKLRKPCYCGAKSCTAFL 285 (290)
T ss_dssp GGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTCCSSSEEEEEEECSSCCCBCCCCCTTCCSBC
T ss_pred hheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCccccccccccccccccCCCCccccCCCcCCCccC
Confidence 999999999999998888876 58999999999999999999998542 2468999999998644
Q ss_pred C
Q 003377 810 D 810 (824)
Q Consensus 810 ~ 810 (824)
+
T Consensus 286 ~ 286 (290)
T 3bo5_A 286 P 286 (290)
T ss_dssp C
T ss_pred C
Confidence 3
No 3
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=100.00 E-value=9.3e-41 Score=343.23 Aligned_cols=187 Identities=29% Similarity=0.544 Sum_probs=158.7
Q ss_pred ccccCCCCCCCCCCCCcccCCCcccCCCCCCCcccccccCCcccCCCCccCCCcccccccCccCcccCCCCcccCCCCCC
Q 003377 574 KQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSL 653 (824)
Q Consensus 574 ~~y~PC~c~~~C~~~C~C~~~g~~Ce~~CgC~~~C~nRf~GC~C~~~~C~t~~CpC~~a~rECdPd~C~~C~~sCg~g~l 653 (824)
.+...|+|..++. +..|+|+.+|.||+. ..||+|+.|. |+
T Consensus 20 ~~~~~C~C~~~~~------------~~~~~c~~~C~nr~~-------------------~~EC~~~~C~-C~-------- 59 (222)
T 3ope_A 20 YEATTCNCKKPDD------------DTRKGCVDDCLNRMI-------------------FAECSPNTCP-CG-------- 59 (222)
T ss_dssp CCCCCCCCCCCSC------------SSSCSSCSCCTTGGG-------------------TBCCCTTTCT-TT--------
T ss_pred ccCccccCcCCCc------------CCCCCCcccCcCcCe-------------------EeEeCCCCCc-CC--------
Confidence 3556677765432 224677777888764 5788887775 32
Q ss_pred CCCCCCCCCCCCchhhhhcccc-cEEEEecCCCCcceeeccccCCCCeeeeecccccCHHHHHHHhh-hhcccCCccccc
Q 003377 654 GEPPKRGDGQCGNMRLLLRQQQ-RILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGK-IYDRANSSFLFD 731 (824)
Q Consensus 654 ~~p~~~~~~~C~N~~lqrg~~~-~l~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k-~yd~~~~sYlf~ 731 (824)
..|.|+.+|++... +|+|++++.+||||||+++|++|+||+||+||||+..|+.+|.. .|.....+|+|.
T Consensus 60 --------~~C~Nr~~q~~~~~~~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~y~~~ 131 (222)
T 3ope_A 60 --------EQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYHNHSDHYCLN 131 (222)
T ss_dssp --------TSCSSCTTTTTCCCSCCEEEECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHTSTTCCSCCEEE
T ss_pred --------CCCCCceEeCCCccccEEEEEcCCCceEEEECceECCCCEEEEecceecCHHHHHHHHHHHhcccCCeEEEe
Confidence 37999999998765 59999999999999999999999999999999999999988853 455556789999
Q ss_pred CCCcEEEeccccCCccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCCC----CCCcccCCCCCCC
Q 003377 732 LNDQYVLDAYRKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPD----QAPAWARKPEGSK 807 (824)
Q Consensus 732 L~~~~~IDA~~~GN~aRFINHSC~PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy~~d----~~pcwCg~pe~~k 807 (824)
++..++|||+.+||++|||||||+|||.++.|.+++.++|+|||+|||++||||||||++... ..+|.||.++|+.
T Consensus 132 l~~~~~IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~~C~CGs~~Crg 211 (222)
T 3ope_A 132 LDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRG 211 (222)
T ss_dssp EETTEEEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCCSCCCBCCCCCTTCCS
T ss_pred cCCCEEEeCccccccceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCCcCCCEeeCCCcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999997532 4789999999985
Q ss_pred C
Q 003377 808 R 808 (824)
Q Consensus 808 ~ 808 (824)
.
T Consensus 212 ~ 212 (222)
T 3ope_A 212 I 212 (222)
T ss_dssp B
T ss_pred c
Confidence 3
No 4
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=100.00 E-value=6.9e-39 Score=339.86 Aligned_cols=145 Identities=28% Similarity=0.548 Sum_probs=135.2
Q ss_pred CCCchhhhhcccccEEEEecCCCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhccc--CCcccccCCCcEEEec
Q 003377 663 QCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRA--NSSFLFDLNDQYVLDA 740 (824)
Q Consensus 663 ~C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~--~~sYlf~L~~~~~IDA 740 (824)
.|+|+.+|++...+|+|++++.+||||||+++|++|+||+||+||||+..++++|...|... ...|+|.++.+++|||
T Consensus 105 ~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~~y~~~l~~~~~IDa 184 (278)
T 3h6l_A 105 YCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYARNKNIHYYFMALKNDEIIDA 184 (278)
T ss_dssp GCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEC
T ss_pred CCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHHHHHHHHHHhccCccceeecccCCeEEeC
Confidence 79999999999999999999999999999999999999999999999999999999888754 3456778999999999
Q ss_pred cccCCccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCC---CCCCcccCCCCCCC
Q 003377 741 YRKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP---DQAPAWARKPEGSK 807 (824)
Q Consensus 741 ~~~GN~aRFINHSC~PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy~~---d~~pcwCg~pe~~k 807 (824)
+.+||++|||||||+|||.++.|.++|.++|+|||+|||++||||||||++.. ...+|+||.++|+.
T Consensus 185 ~~~GN~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~Crg 254 (278)
T 3h6l_A 185 TQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRG 254 (278)
T ss_dssp SSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEECSSCEECCCCCTTCCS
T ss_pred cccCChhhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCCCCCcEeECCCCCCee
Confidence 99999999999999999999999999999999999999999999999999753 45789999999884
No 5
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=100.00 E-value=3.5e-38 Score=337.48 Aligned_cols=146 Identities=28% Similarity=0.410 Sum_probs=122.5
Q ss_pred CCCCchhhhhcccccEEEEecCCCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCCC-----cE
Q 003377 662 GQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLND-----QY 736 (824)
Q Consensus 662 ~~C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~~-----~~ 736 (824)
..|.|+.+|++...+|+|++++.+||||||+++|++|+||+||+||||+..|+++|...|+..+.+|+|.++. .+
T Consensus 124 ~~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~~~~~~~~ 203 (299)
T 1mvh_A 124 MECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVITSAEAAKRDKNYDDDGITYLFDLDMFDDASEY 203 (299)
T ss_dssp TTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCCEEEEHHHHHHHHTTCCSCSCCCEEEECSSCSSSCE
T ss_pred CCcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEEEeeeEECcHHHHHHHHHhhhccCceEEEEecCCCCCccE
Confidence 3899999999999999999999999999999999999999999999999999999999998888899999874 58
Q ss_pred EEeccccCCccccccCCCCCCcceeEEEEc----CeeEEEEEEccCCCCCCeEEEecCCCCC-----------------C
Q 003377 737 VLDAYRKGDKLKFANHSSNPNCFAKVMLVA----GDHRVGIFAKEHIEASEELFYDYRYGPD-----------------Q 795 (824)
Q Consensus 737 ~IDA~~~GN~aRFINHSC~PNc~~~~v~V~----G~~rI~~fA~RDI~aGEELTfDYgy~~d-----------------~ 795 (824)
+|||+.+||++|||||||+|||.+..++++ +.++|+|||+|||++||||||||++... .
T Consensus 204 ~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~k~~ 283 (299)
T 1mvh_A 204 TVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRISKLR 283 (299)
T ss_dssp EEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSSSSCCC-------------
T ss_pred EEeCcccCChhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCcccccccccccccccccccCC
Confidence 999999999999999999999988765554 3579999999999999999999986533 1
Q ss_pred CCcccCCCCCCC
Q 003377 796 APAWARKPEGSK 807 (824)
Q Consensus 796 ~pcwCg~pe~~k 807 (824)
.+|+||.++|+.
T Consensus 284 ~~C~CGs~~Crg 295 (299)
T 1mvh_A 284 RQCKCGSANCRG 295 (299)
T ss_dssp ------------
T ss_pred cCcCCCCCCCcc
Confidence 489999999875
No 6
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=100.00 E-value=5e-38 Score=334.63 Aligned_cols=154 Identities=30% Similarity=0.492 Sum_probs=133.2
Q ss_pred cccCCCCcccCCCCCCCCCCCCCCCCCCchhhhhcccccEEEEecCCCCcceeeccccCCCCeeeeecccccCHHHHHHH
Q 003377 638 PDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKR 717 (824)
Q Consensus 638 Pd~C~~C~~sCg~g~l~~p~~~~~~~C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R 717 (824)
+.+-.+|+..|+|+ ..|+|+.+|++.+.+|+|++++.+||||||+++|++|+||+||+||||+..|++.|
T Consensus 120 ~~~i~EC~~~C~C~----------~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~r 189 (287)
T 3hna_A 120 PPLIFECNHACSCW----------RNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADVR 189 (287)
T ss_dssp CCCEECCCTTSSSC----------TTCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHTC
T ss_pred CceEEecCCCCCCC----------CCCCCcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhhh
Confidence 33444666666664 48999999999999999999999999999999999999999999999999999877
Q ss_pred hhhhcccCCcccccCCCc----EEEeccccCCccccccCCCCCCcceeEEEEcC----eeEEEEEEccCCCCCCeEEEec
Q 003377 718 GKIYDRANSSFLFDLNDQ----YVLDAYRKGDKLKFANHSSNPNCFAKVMLVAG----DHRVGIFAKEHIEASEELFYDY 789 (824)
Q Consensus 718 ~k~yd~~~~sYlf~L~~~----~~IDA~~~GN~aRFINHSC~PNc~~~~v~V~G----~~rI~~fA~RDI~aGEELTfDY 789 (824)
. ..+|+|.++.. ++|||+.+||++|||||||+||+.+..+++.+ .++|+|||+|||++||||||||
T Consensus 190 ~------~~~Y~f~l~~~~~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dY 263 (287)
T 3hna_A 190 E------EDSYLFDLDNKDGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDY 263 (287)
T ss_dssp S------CCTTEEESCCSSSSCEEEEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECC
T ss_pred c------ccceEEEeccCCCceEEEeccccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeC
Confidence 3 46899988754 79999999999999999999999987766553 3599999999999999999999
Q ss_pred CCC-----CCCCCcccCCCCCCC
Q 003377 790 RYG-----PDQAPAWARKPEGSK 807 (824)
Q Consensus 790 gy~-----~d~~pcwCg~pe~~k 807 (824)
++. ....+|+||.++|+.
T Consensus 264 g~~~~~~~~~~~~C~CGs~~CRg 286 (287)
T 3hna_A 264 GERFWDIKGKLFSCRCGSPKCRH 286 (287)
T ss_dssp CHHHHHHHTTTCCCCCCCTTCSC
T ss_pred CCcccccCCCcCEeeCCCCCCCC
Confidence 853 245789999999874
No 7
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=100.00 E-value=3e-37 Score=330.42 Aligned_cols=146 Identities=22% Similarity=0.367 Sum_probs=116.4
Q ss_pred CCCCchhhhhcccccEEEEecCCCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcc--cCCcccccCCC-----
Q 003377 662 GQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDR--ANSSFLFDLND----- 734 (824)
Q Consensus 662 ~~C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~--~~~sYlf~L~~----- 734 (824)
..|.|+.+|++...+|+|++++.+||||||+++|++|+||+||+||||+..|+++|...|.. ....|+|.|+.
T Consensus 120 ~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~~~~~~~~Y~f~l~~~~~~~ 199 (302)
T 1ml9_A 120 KDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEIITSEEADRRRAESTIARRKDVYLFALDKFSDPD 199 (302)
T ss_dssp TTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEEECHHHHHHHHHHSCGGGCHHHHEEECCSSCCSS
T ss_pred CCCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEeCHHHHHHHHHHHhhhcCCceEEEEeccccCcc
Confidence 38999999999999999999999999999999999999999999999999999999887643 34579998874
Q ss_pred ---------cEEEeccccCCccccccCCCCCCcceeEEEEc----CeeEEEEEEccCCCCCCeEEEecCCCCC-------
Q 003377 735 ---------QYVLDAYRKGDKLKFANHSSNPNCFAKVMLVA----GDHRVGIFAKEHIEASEELFYDYRYGPD------- 794 (824)
Q Consensus 735 ---------~~~IDA~~~GN~aRFINHSC~PNc~~~~v~V~----G~~rI~~fA~RDI~aGEELTfDYgy~~d------- 794 (824)
.++|||+.+||++|||||||+|||.+..+..+ +.++|+|||+|||++||||||||++...
T Consensus 200 ~~d~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~ 279 (302)
T 1ml9_A 200 SLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAH 279 (302)
T ss_dssp SSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC----------
T ss_pred cccccccCCcEEEeCcccCCHHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccc
Confidence 58999999999999999999999987654332 2369999999999999999999986432
Q ss_pred -------CCCcccCCCCCCC
Q 003377 795 -------QAPAWARKPEGSK 807 (824)
Q Consensus 795 -------~~pcwCg~pe~~k 807 (824)
..+|+||.++|+.
T Consensus 280 ~~~k~~~~~~C~CGs~~Crg 299 (302)
T 1ml9_A 280 DPSKISEMTKCLCGTAKCRG 299 (302)
T ss_dssp --------------------
T ss_pred cccccCCCcEeeCCCCcCcc
Confidence 2589999999874
No 8
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=323.57 Aligned_cols=146 Identities=28% Similarity=0.503 Sum_probs=132.9
Q ss_pred CCCCchhhhhcccccEEEEecC-CCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCC---CcEE
Q 003377 662 GQCGNMRLLLRQQQRILLAKSD-VAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN---DQYV 737 (824)
Q Consensus 662 ~~C~N~~lqrg~~~~l~V~kS~-~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~---~~~~ 737 (824)
..|.|+.+|++.+.+|+|+++. .+||||||+++|++|+||+||+||||+..|+++|...|+..+.+|+|.++ ..++
T Consensus 127 ~~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ea~~R~~~y~~~~~~Y~f~l~~~~~~~~ 206 (300)
T 2r3a_A 127 PDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSEEAERRGQFYDNKGITYLFDLDYESDEFT 206 (300)
T ss_dssp TTCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHHHHHHHHHTCCHHHHHTEEECCSSCSSEE
T ss_pred CcCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHHHHHHHHHHhhhccccEEEEeecCCceEE
Confidence 3899999999999999999986 69999999999999999999999999999999999999887889999887 5699
Q ss_pred EeccccCCccccccCCCCCCcceeEEEEc----CeeEEEEEEccCCCCCCeEEEecCCCC-----------------CCC
Q 003377 738 LDAYRKGDKLKFANHSSNPNCFAKVMLVA----GDHRVGIFAKEHIEASEELFYDYRYGP-----------------DQA 796 (824)
Q Consensus 738 IDA~~~GN~aRFINHSC~PNc~~~~v~V~----G~~rI~~fA~RDI~aGEELTfDYgy~~-----------------d~~ 796 (824)
|||+.+||++|||||||+|||.+..|.++ +.++|+|||+|||++||||||||++.. ...
T Consensus 207 IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~d~~~~~~~~~~ 286 (300)
T 2r3a_A 207 VDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSGDISSDSIDHSPAKKRVRT 286 (300)
T ss_dssp EECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSSCC--------------CCCC
T ss_pred EecccccChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCccccccccccccccccccCCC
Confidence 99999999999999999999998888775 357999999999999999999998652 136
Q ss_pred CcccCCCCCCC
Q 003377 797 PAWARKPEGSK 807 (824)
Q Consensus 797 pcwCg~pe~~k 807 (824)
+|+||.++|+.
T Consensus 287 ~C~CGs~~Crg 297 (300)
T 2r3a_A 287 VCKCGAVTCRG 297 (300)
T ss_dssp BCCCCCTTCCS
T ss_pred EeeCCCccccc
Confidence 89999999875
No 9
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=100.00 E-value=3.7e-34 Score=288.94 Aligned_cols=145 Identities=30% Similarity=0.548 Sum_probs=132.8
Q ss_pred CCCchhhhhcccccEEEEecCCCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccC-CcccccCCCcEEEecc
Q 003377 663 QCGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRAN-SSFLFDLNDQYVLDAY 741 (824)
Q Consensus 663 ~C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~-~sYlf~L~~~~~IDA~ 741 (824)
.|.++.+|++...+|+|++++++||||||+++|++|+||+||+||||+..++++|...|+..+ .+|+|.++..++|||+
T Consensus 40 ~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~Y~f~l~~~~~IDa~ 119 (192)
T 2w5y_A 40 PMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVDAT 119 (192)
T ss_dssp HHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHTCCCCEEECSSSEEEECT
T ss_pred chhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcCCceeeeeecCceEEECc
Confidence 577788888888999999999999999999999999999999999999999999988887654 4799999999999999
Q ss_pred ccCCccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCCC----CCCcccCCCCCCC
Q 003377 742 RKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPD----QAPAWARKPEGSK 807 (824)
Q Consensus 742 ~~GN~aRFINHSC~PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy~~d----~~pcwCg~pe~~k 807 (824)
..||++|||||||+|||.+..|.++|..+|+|||+|||++||||||||++... ..+|.|+.+.|+.
T Consensus 120 ~~Gn~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~~~~~~C~Cgs~~Crg 189 (192)
T 2w5y_A 120 MHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRK 189 (192)
T ss_dssp TTCCGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC-------CCBCCCCCTTCCS
T ss_pred cccChhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcCCCCceeECCCCCCcC
Confidence 99999999999999999999999999999999999999999999999997653 4689999999874
No 10
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.97 E-value=2.5e-32 Score=266.96 Aligned_cols=131 Identities=26% Similarity=0.431 Sum_probs=119.3
Q ss_pred CCchhhhhcccccEEEEecCCCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhccc--CCccccc---CCCcEEE
Q 003377 664 CGNMRLLLRQQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRA--NSSFLFD---LNDQYVL 738 (824)
Q Consensus 664 C~N~~lqrg~~~~l~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~--~~sYlf~---L~~~~~I 738 (824)
.-++.+|++...+++|+.++.+||||||+++|++|+||+||+|++|+..+++.|...|... ...|+|. ++..++|
T Consensus 19 ~~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~i 98 (166)
T 3f9x_A 19 RIDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYLSKTYCV 98 (166)
T ss_dssp HHHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTTCTTSCCCEEEEEETTEEEEE
T ss_pred HHHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhhccCCCceEEEEecCCCCeEE
Confidence 4567889999999999999999999999999999999999999999999999999888764 3345553 7788999
Q ss_pred ecccc-CCccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCCC
Q 003377 739 DAYRK-GDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPD 794 (824)
Q Consensus 739 DA~~~-GN~aRFINHSC~PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy~~d 794 (824)
||+.. ||++|||||||+|||.+..+.+++.++|+|||+|||++||||||||++...
T Consensus 99 Da~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 155 (166)
T 3f9x_A 99 DATRETNRLGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSK 155 (166)
T ss_dssp ECCSCCSCSGGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCH
T ss_pred echhcCCChhheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChh
Confidence 99996 999999999999999999999999999999999999999999999997654
No 11
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.95 E-value=7.9e-28 Score=253.14 Aligned_cols=117 Identities=29% Similarity=0.371 Sum_probs=103.8
Q ss_pred cccEEEEecCCC--CcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCCCcEEEecc--------cc
Q 003377 674 QQRILLAKSDVA--GWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAY--------RK 743 (824)
Q Consensus 674 ~~~l~V~kS~~k--G~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~~~~~IDA~--------~~ 743 (824)
...+.|.+|.++ ||||||+++|++|+||+||+||+|+..++++|...|+ .|+|.++..++|||+ .+
T Consensus 108 ~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~~----~~~f~l~~~~~IDa~~~~~~~~~~~ 183 (261)
T 2f69_A 108 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALN----GNTLSLDEETVIDVPEPYNHVSKYC 183 (261)
T ss_dssp HTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGGC----SSCEECSSSCEEECCTTTTSTTTCC
T ss_pred CceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhhc----cceeeecCCeEEEcccccccccccc
Confidence 467999999986 9999999999999999999999999999999977663 578999999999995 49
Q ss_pred CCccccccCCCCCCcceeEEEEcCe-eEEEEEEccCCCCCCeEEEecCCCCC
Q 003377 744 GDKLKFANHSSNPNCFAKVMLVAGD-HRVGIFAKEHIEASEELFYDYRYGPD 794 (824)
Q Consensus 744 GN~aRFINHSC~PNc~~~~v~V~G~-~rI~~fA~RDI~aGEELTfDYgy~~d 794 (824)
||++|||||||+|||.+..|...+. ..|+|||+|||++||||||||++..+
T Consensus 184 Gn~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~ 235 (261)
T 2f69_A 184 ASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 235 (261)
T ss_dssp SCCGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSC
T ss_pred ccceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCccc
Confidence 9999999999999999988743332 44599999999999999999998766
No 12
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.93 E-value=4.1e-26 Score=242.33 Aligned_cols=117 Identities=28% Similarity=0.360 Sum_probs=104.0
Q ss_pred cccEEEEecCCCC--cceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCCCcEEEec--------ccc
Q 003377 674 QQRILLAKSDVAG--WGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDA--------YRK 743 (824)
Q Consensus 674 ~~~l~V~kS~~kG--~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~~~~~IDA--------~~~ 743 (824)
.+.|.|++|+++| |||||+++|++|+||+||+||+|+..++++|...|+ .|+|.++..++||| +..
T Consensus 162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~~----~~~~~l~~~~~iDa~~~~~~~~~~~ 237 (293)
T 1h3i_A 162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWALN----GNTLSLDEETVIDVPEPYNHVSKYC 237 (293)
T ss_dssp HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGGC----TTEEECSSSCEEECCTTTTSTTTCC
T ss_pred ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhcc----cCEEecCCCEEEeCcccccccceee
Confidence 4689999999866 999999999999999999999999999999976653 57899999999999 779
Q ss_pred CCccccccCCCCCCcceeEEEEcCeeE-EEEEEccCCCCCCeEEEecCCCCC
Q 003377 744 GDKLKFANHSSNPNCFAKVMLVAGDHR-VGIFAKEHIEASEELFYDYRYGPD 794 (824)
Q Consensus 744 GN~aRFINHSC~PNc~~~~v~V~G~~r-I~~fA~RDI~aGEELTfDYgy~~d 794 (824)
||++|||||||+|||.+..+...+..+ |+|||+|||++||||||||++..+
T Consensus 238 gn~ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~~ 289 (293)
T 1h3i_A 238 ASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 289 (293)
T ss_dssp SCCGGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTBC
T ss_pred ccceeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCCC
Confidence 999999999999999998875444345 599999999999999999998754
No 13
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.93 E-value=1.3e-26 Score=215.99 Aligned_cols=107 Identities=24% Similarity=0.341 Sum_probs=95.8
Q ss_pred cccEEEEecCCCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCCCcEEEeccccCCccccccCC
Q 003377 674 QQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHS 753 (824)
Q Consensus 674 ~~~l~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~~~~~IDA~~~GN~aRFINHS 753 (824)
.++++|++|+++||||||+++|++|++|+||.|++++..+++. ....|+|.++. |++..||.+||||||
T Consensus 3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~-------~~~~y~f~~~~----d~~~~~~~~~~~NHs 71 (119)
T 1n3j_A 3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGT-------ALEDYLFSRKN----MSAMALGFGAIFNHS 71 (119)
T ss_dssp CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHH-------HSCSEEEEETT----EEEEESSSHHHHHSC
T ss_pred CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhh-------ccCCeEEEeCC----ccccccCceeeeccC
Confidence 4689999999999999999999999999999999999988865 23568998877 899999999999999
Q ss_pred CCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCC
Q 003377 754 SNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP 793 (824)
Q Consensus 754 C~PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy~~ 793 (824)
|+|||.+.. +.+..++.|+|+|||++|||||+||+...
T Consensus 72 c~pN~~~~~--~~~~~~~~~~A~rdI~~GeElt~~Y~~~~ 109 (119)
T 1n3j_A 72 KDPNARHEL--TAGLKRMRIFTIKPIAIGEEITISYGDDY 109 (119)
T ss_dssp SSCCCEEEE--CSSSSCEEEEECSCBCSSEEECCCCCCCC
T ss_pred CCCCeeEEE--ECCCeEEEEEEccccCCCCEEEEecCchh
Confidence 999997654 46778999999999999999999998653
No 14
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.92 E-value=4e-26 Score=221.98 Aligned_cols=117 Identities=19% Similarity=0.282 Sum_probs=97.8
Q ss_pred CCCchhhhhcccccEEEEecCC--CCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCC---C-cE
Q 003377 663 QCGNMRLLLRQQQRILLAKSDV--AGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN---D-QY 736 (824)
Q Consensus 663 ~C~N~~lqrg~~~~l~V~kS~~--kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~---~-~~ 736 (824)
.+.|+ .++..+..|.|++|.+ +||||||+++|++|++|+||+||+|+..++. ...|+|.+. . .+
T Consensus 18 ~~~~~-~~~~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~---------~~~Y~f~i~~~~~~~~ 87 (149)
T 2qpw_A 18 EVPEH-VLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK---------NNVYMWEVYYPNLGWM 87 (149)
T ss_dssp GSCHH-HHHTCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC---------CSSSEEEEEETTTEEE
T ss_pred hhhHH-HHhCCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc---------cCceEEEEecCCCeeE
Confidence 34454 3466788999999975 6999999999999999999999999876542 357999873 3 36
Q ss_pred EEeccc--cCCccccccCCCCC---CcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCC
Q 003377 737 VLDAYR--KGDKLKFANHSSNP---NCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP 793 (824)
Q Consensus 737 ~IDA~~--~GN~aRFINHSC~P---Nc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy~~ 793 (824)
+|||+. .||++|||||||+| ||.+. ....+|+|||+|||++||||||||+...
T Consensus 88 ~IDa~~~~~gn~~RfINhSc~p~eqNl~~~----~~~~~I~~~A~RdI~~GEEL~~dY~~~~ 145 (149)
T 2qpw_A 88 CIDATDPEKGNWLRYVNWACSGEEQNLFPL----EINRAIYYKTLKPIAPGEELLVWYNGED 145 (149)
T ss_dssp EEECSSGGGSCGGGGCEECBTTBTCCEEEE----EETTEEEEEESSCBCTTCBCEECCCCCC
T ss_pred EEeCCCCCCCcceeeeeccCChhhcCEEEE----EECCEEEEEEccCCCCCCEEEEccCCcc
Confidence 899998 99999999999999 98763 2346899999999999999999998654
No 15
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.87 E-value=1.1e-23 Score=222.59 Aligned_cols=128 Identities=17% Similarity=0.131 Sum_probs=93.6
Q ss_pred cEEEEec-----CCCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCCCcEEEeccccCCccccc
Q 003377 676 RILLAKS-----DVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFA 750 (824)
Q Consensus 676 ~l~V~kS-----~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~~~~~IDA~~~GN~aRFI 750 (824)
.++|..+ +.+||||||+++|++|+||+||+|+|+...+++++.-.. .....|.+.... ...+++.+||.+|||
T Consensus 132 gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~~~~-~~~~dF~i~~s~-~~~~a~~~g~~arfi 209 (273)
T 3s8p_A 132 GFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENMLLR-HGENDFSVMYST-RKNCAQLWLGPAAFI 209 (273)
T ss_dssp CEEEEEECCCTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHHHCC-TTTSCTTEEEET-TTTEEEEEESGGGGC
T ss_pred CceEEeccceeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHHHhh-hcccccceeccc-cccccceecchHHhh
Confidence 4555544 459999999999999999999999998777766542111 111223222111 113478899999999
Q ss_pred cCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCC---CCCCcccCCCCCCCC
Q 003377 751 NHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP---DQAPAWARKPEGSKR 808 (824)
Q Consensus 751 NHSC~PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy~~---d~~pcwCg~pe~~k~ 808 (824)
||||+|||.+ ...|..+|+|+|+|||++||||||||+... ...+|.|+.++|...
T Consensus 210 NHSC~PN~~~---~~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~~~~f~C~C~~c~crG~ 267 (273)
T 3s8p_A 210 NHDCRPNCKF---VSTGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTCERRGT 267 (273)
T ss_dssp EECSSCSEEE---EEEETTEEEEEESSCBCTTCBCEECCCTTTTSGGGTTCCCHHHHHHTC
T ss_pred CCCCCCCeEE---EEcCCCEEEEEECceeCCCCEEEEecCchhcCCCCeEEECCCCcCCCC
Confidence 9999999964 234566899999999999999999998543 346799988877643
No 16
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.81 E-value=4.5e-21 Score=200.37 Aligned_cols=115 Identities=19% Similarity=0.138 Sum_probs=84.1
Q ss_pred CCCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCCCcEEEeccccCCccccccCCCCCCcceeE
Q 003377 683 DVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCFAKV 762 (824)
Q Consensus 683 ~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~~~~~IDA~~~GN~aRFINHSC~PNc~~~~ 762 (824)
..+||||||+++|++|++|+||+|+++...+++.+. +......|.+.... ..+++..+||.+|||||||.|||.+..
T Consensus 116 ~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~--~~~~~n~f~i~~~~-~~~~~~l~~~~ar~iNHSC~PN~~~~~ 192 (247)
T 3rq4_A 116 ETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGL--LRAGENDFSIMYST-RKRSAQLWLGPAAFINHDCKPNCKFVP 192 (247)
T ss_dssp CSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGG--CCTTTSCTTEEEET-TTTEEEEEESGGGGCEECSSCSEEEEE
T ss_pred cCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHh--hhccCCcEEEEecC-CcccceeecchhhhcCCCCCCCEEEEE
Confidence 458999999999999999999999998665555432 22222223222211 124677889999999999999996433
Q ss_pred EEEcCeeEEEEEEccCCCCCCeEEEecCCCCC---CCCcccCCC
Q 003377 763 MLVAGDHRVGIFAKEHIEASEELFYDYRYGPD---QAPAWARKP 803 (824)
Q Consensus 763 v~V~G~~rI~~fA~RDI~aGEELTfDYgy~~d---~~pcwCg~p 803 (824)
+ +..+|.|+|+|||++||||||+|+.... ...|.|+.+
T Consensus 193 --~-~~~~i~v~A~rdI~~GEElt~~Y~~~~~~~~~f~C~C~~C 233 (247)
T 3rq4_A 193 --A-DGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHTC 233 (247)
T ss_dssp --E-TTTEEEEEESSCBCTTCBCEECCCTTSSSGGGTTCCCHHH
T ss_pred --e-CCCEEEEEECCcCCCCCEEEEecCchhcCCCCCEEECCCC
Confidence 3 3468999999999999999999985432 345776643
No 17
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=99.78 E-value=1.5e-19 Score=179.39 Aligned_cols=112 Identities=21% Similarity=0.345 Sum_probs=83.2
Q ss_pred cccccEEEEecCC--CCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCCC-----cEEEeccc--
Q 003377 672 RQQQRILLAKSDV--AGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLND-----QYVLDAYR-- 742 (824)
Q Consensus 672 g~~~~l~V~kS~~--kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~~-----~~~IDA~~-- 742 (824)
.....|.|.+|.+ +|+||||+++|++|++|++|+|++++.++++.. .+..|+|.+.. .++||++.
T Consensus 24 sLP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~------~~~~y~w~i~~~~G~~~~~IDa~~e~ 97 (170)
T 3ep0_A 24 VLPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDIC------KNNNLMWEVFNEDGTVRYFIDASQED 97 (170)
T ss_dssp SCCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC----------------CEEEEECTTSSEEEEEECC---
T ss_pred CCCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhccc------cCCceEEEEecCCCcEEEEEECCCCC
Confidence 4567899999976 489999999999999999999999999887642 34678887632 27999998
Q ss_pred cCCccccccCCCC---CCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCCC
Q 003377 743 KGDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGP 793 (824)
Q Consensus 743 ~GN~aRFINHSC~---PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy~~ 793 (824)
.||++|||||+|. +|+.+.. + ..+|.|+|+|||.|||||+|+|+-..
T Consensus 98 ~~NWmR~Vn~A~~~~eqNl~a~q--~--~~~I~~~a~RdI~pGeELlvwYg~~y 147 (170)
T 3ep0_A 98 HRSWMTYIKCARNEQEQNLEVVQ--I--GTSIFYKAIEMIPPDQELLVWYGNSH 147 (170)
T ss_dssp ---GGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECC--
T ss_pred CcceeeeEEecCCcccCCeeeEE--E--CCEEEEEECcCcCCCCEEEEeeCHHH
Confidence 8999999999996 8886533 2 35899999999999999999998443
No 18
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=99.75 E-value=1.8e-18 Score=168.47 Aligned_cols=121 Identities=14% Similarity=0.219 Sum_probs=87.3
Q ss_pred CCCchhhhhcccccEEEEecC-CCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCC--C--cEE
Q 003377 663 QCGNMRLLLRQQQRILLAKSD-VAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN--D--QYV 737 (824)
Q Consensus 663 ~C~N~~lqrg~~~~l~V~kS~-~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~--~--~~~ 737 (824)
...++.. .-....|.|..|. .+|+||||+++|++|+++++|.|++++..++..|. ..+..|+|.+. . .++
T Consensus 12 ~v~~ra~-~slP~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~----~~~~~y~w~i~~~~~~~~~ 86 (151)
T 3db5_A 12 PIESRAR-LSLPKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWT----DKAVNHIWKIYHNGVLEFC 86 (151)
T ss_dssp CCCCHHH-HTCCTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC---------------CCSEEEEEETTEEEEE
T ss_pred cCCChHH-hcCCCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhccc----ccCCCceEEEEeCCCEEEE
Confidence 3445443 4456789998873 48999999999999999999999999999887762 12346777642 2 368
Q ss_pred Eeccc--cCCccccccCCCC---CCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCC
Q 003377 738 LDAYR--KGDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYG 792 (824)
Q Consensus 738 IDA~~--~GN~aRFINHSC~---PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy~ 792 (824)
||++. .||++|||||+|. +|+.+.. . ..+|.|+|+|||.+||||+|+|+-.
T Consensus 87 iD~~~~~~~NWmR~Vn~A~~~~eqNl~a~q--~--~~~I~~~a~rdI~pGeELlv~Yg~~ 142 (151)
T 3db5_A 87 IITTDENECNWMMFVRKARNREEQNLVAYP--H--DGKIFFCTSQDIPPENELLFYYSRD 142 (151)
T ss_dssp EECCCTTTSCGGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEECC-
T ss_pred EECcCCCCCcceeEEEecCCcccCceEEEE--E--CCEEEEEEccccCCCCEEEEecCHH
Confidence 99997 5999999999995 5987643 2 3579999999999999999999844
No 19
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=99.74 E-value=9.5e-19 Score=177.16 Aligned_cols=110 Identities=18% Similarity=0.310 Sum_probs=91.3
Q ss_pred hcccccEEEEecCC--CCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCCC----cEEEeccc--
Q 003377 671 LRQQQRILLAKSDV--AGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLND----QYVLDAYR-- 742 (824)
Q Consensus 671 rg~~~~l~V~kS~~--kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~~----~~~IDA~~-- 742 (824)
.-....|.|..|.+ +|+||||+++|++|+++++|.|++++.+++.. ..+..|+|.+.. .++|||+.
T Consensus 54 ~SLP~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~------~~~~~y~w~i~~~g~~~~~IDas~e~ 127 (196)
T 3dal_A 54 ASLPRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPK------NANRKYFWRIYSRGELHHFIDGFNEE 127 (196)
T ss_dssp HTCCTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC---------CCTTEEEEEETTEEEEEEECCCTT
T ss_pred hcCCCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhh------ccCCcceeeeccCCCEEEEEECCCCC
Confidence 34567899999977 89999999999999999999999999876532 234578887732 37999987
Q ss_pred cCCccccccCCCC---CCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecC
Q 003377 743 KGDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYR 790 (824)
Q Consensus 743 ~GN~aRFINHSC~---PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYg 790 (824)
.||++|||||+|. +|+.+.. + ..+|.|+|+|||.|||||+|+|+
T Consensus 128 ~gNWmRfVn~A~~~~eqNl~a~q--~--~~~I~y~a~RdI~pGeELlvwYg 174 (196)
T 3dal_A 128 KSNWMRYVNPAHSPREQNLAACQ--N--GMNIYFYTIKPIPANQELLVWYC 174 (196)
T ss_dssp SSCGGGGCEECSSTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEEC
T ss_pred CCceEEeEEecCCcccCCcEEEE--E--CCEEEEEECcccCCCCEEEEecC
Confidence 8999999999996 7986533 2 36899999999999999999998
No 20
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=99.57 E-value=2.2e-15 Score=156.07 Aligned_cols=106 Identities=18% Similarity=0.185 Sum_probs=85.0
Q ss_pred hcccccEEEEecCCCCcceeec-cccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccCC----CcEEEeccc--c
Q 003377 671 LRQQQRILLAKSDVAGWGAFLK-NSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLN----DQYVLDAYR--K 743 (824)
Q Consensus 671 rg~~~~l~V~kS~~kG~GLfA~-edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L~----~~~~IDA~~--~ 743 (824)
.-....|.|.+|.+.|+|||+. +.|++|+.+++|.|++++..+++ ..|+|.+. ..++||+.. .
T Consensus 68 lSLP~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~----------~~y~wei~~~~g~~~~IDgsde~~ 137 (237)
T 3ray_A 68 LTIPQGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA----------GFFSWLIVDKNNRYKSIDGSDETK 137 (237)
T ss_dssp HTCCTTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC---------------CCEEEEECTTSCEEEEECCCTTT
T ss_pred hcCCCCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc----------ccceEEEEcCCCcEEEEecCCCCC
Confidence 3456779999999999999987 89999999999999999887653 23555442 236899997 7
Q ss_pred CCccccccCCCC---CCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecC
Q 003377 744 GDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYR 790 (824)
Q Consensus 744 GN~aRFINHSC~---PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYg 790 (824)
||++|||||+|. +|+.+.. + ..+|.|+|+|||.+||||+|+|+
T Consensus 138 gNWmRfVn~Ar~~~EqNL~A~q--~--~~~Iyy~a~RdI~pGeELlVwYg 183 (237)
T 3ray_A 138 ANWMRYVVISREEREQNLLAFQ--H--SERIYFRACRDIRPGEWLRVWYS 183 (237)
T ss_dssp SCGGGGCEECCCTTTCCEEEEE--E--TTEEEEEESSCBCTTCBCEEEEC
T ss_pred CcceeEEEcCCCcccccceeEE--e--CCEEEEEEccccCCCCEEEEeeC
Confidence 999999999996 6876533 2 36899999999999999999997
No 21
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=99.53 E-value=5.1e-15 Score=144.46 Aligned_cols=102 Identities=18% Similarity=0.202 Sum_probs=79.6
Q ss_pred ccccEEEEecCCCCcceeeccccCCCCeeeeecccccCHHHHHHHhhhhcccCCcccccC------------CCcEEEec
Q 003377 673 QQQRILLAKSDVAGWGAFLKNSVSKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDL------------NDQYVLDA 740 (824)
Q Consensus 673 ~~~~l~V~kS~~kG~GLfA~edI~kGefI~EY~GEIIs~~Ea~~R~k~yd~~~~sYlf~L------------~~~~~IDA 740 (824)
....|.|.+ .|+||||+++|++|+.+++|.|++++..++.. ..|+|.+ +..++||+
T Consensus 21 LP~~L~i~~---~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~~---------~~~~~~v~~~d~~~~~~~~~~~~~iD~ 88 (152)
T 3ihx_A 21 LPLVLYIDR---FLGGVFSKRRIPKRTQFGPVEGPLVRGSELKD---------CYIHLKVSLDKGDRKERDLHEDLWFEL 88 (152)
T ss_dssp SCTTEEECT---TTCSEEESSCBCSSCEECCCCSCEECSTTCCS---------SSCCCBC---------------CEECC
T ss_pred CCcceEEee---cCCeEEECceecCCCEEEeeccEEcCHHHhcc---------CcceEEEEccccccccccCCccEEEEc
Confidence 344566654 58999999999999999999999999876522 2333332 13579999
Q ss_pred cc--cCCccccccCCCC---CCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecC
Q 003377 741 YR--KGDKLKFANHSSN---PNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYR 790 (824)
Q Consensus 741 ~~--~GN~aRFINHSC~---PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYg 790 (824)
+. .||++|||||+|. +|+.+.. ...+|.|.|+|+|.+||||+++|+
T Consensus 89 ~~~~~~NWmr~vn~a~~~~eqNl~a~q----~~~~I~~~~~r~I~pGeELlv~Y~ 139 (152)
T 3ihx_A 89 SDETLCNWMMFVRPAQNHLEQNLVAYQ----YGHHVYYTTIKNVEPKQELKVWYA 139 (152)
T ss_dssp CCTTTSCGGGGCCBCCSTTTCCEEEEE----CSSSEEEEESSCBCTTCBCCEEEC
T ss_pred cCCCCCcceeeeeccCCccCCCcEEEE----eCCeEEEEEeeecCCCCEEEEech
Confidence 87 5999999999997 7886532 245788999999999999999997
No 22
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.22 E-value=5.4e-07 Score=100.42 Aligned_cols=44 Identities=32% Similarity=0.380 Sum_probs=36.1
Q ss_pred CccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCC
Q 003377 745 DKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYG 792 (824)
Q Consensus 745 N~aRFINHSC~PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy~ 792 (824)
..+.||||||.|||.+.. . | .++.|+|+|||++|||||++|...
T Consensus 200 ~~~s~~NHsC~PN~~~~~--~-~-~~~~~~a~r~I~~GeEl~isY~~~ 243 (429)
T 3qwp_A 200 PSISLLNHSCDPNCSIVF--N-G-PHLLLRAVRDIEVGEELTICYLDM 243 (429)
T ss_dssp TTGGGCEECSSCSEEEEE--E-T-TEEEEEECSCBCTTCEEEECCSCS
T ss_pred hhhHhhCcCCCCCeEEEE--e-C-CEEEEEEeeeECCCCEEEEEecCC
Confidence 457899999999996532 2 3 468899999999999999999743
No 23
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.22 E-value=5.8e-07 Score=102.03 Aligned_cols=44 Identities=32% Similarity=0.460 Sum_probs=35.5
Q ss_pred ccccccCCCCCCcceeEEEEcCe-----------eEEEEEEccCCCCCCeEEEecCC
Q 003377 746 KLKFANHSSNPNCFAKVMLVAGD-----------HRVGIFAKEHIEASEELFYDYRY 791 (824)
Q Consensus 746 ~aRFINHSC~PNc~~~~v~V~G~-----------~rI~~fA~RDI~aGEELTfDYgy 791 (824)
.+.||||||.|||.+. +.++. .+|.|+|+|||++|||||++|..
T Consensus 200 ~~s~~NHSC~PN~~~~--~~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~ 254 (490)
T 3n71_A 200 NLGLVNHDCWPNCTVI--FNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYID 254 (490)
T ss_dssp TGGGCEECSSCSEEEE--EECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSC
T ss_pred hhhhcccCCCCCeeEE--ecCCccccccccccccceEEEEECCCCCCCCEEEEeecC
Confidence 4578999999999643 33332 28999999999999999999973
No 24
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.04 E-value=2e-06 Score=96.18 Aligned_cols=43 Identities=26% Similarity=0.379 Sum_probs=34.8
Q ss_pred ccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCCC
Q 003377 746 KLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYG 792 (824)
Q Consensus 746 ~aRFINHSC~PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy~ 792 (824)
.+.|+||||.|||.+. + .| .++.|+|+|||++|||||++|...
T Consensus 201 ~~s~~NHsC~PN~~~~--~-~~-~~~~~~a~r~I~~Geel~i~Y~~~ 243 (433)
T 3qww_A 201 DVALMNHSCCPNVIVT--Y-KG-TLAEVRAVQEIHPGDEVFTSYIDL 243 (433)
T ss_dssp TGGGSEECSSCSEEEE--E-ET-TEEEEEESSCBCTTCEEEECCSCT
T ss_pred cccccCCCCCCCceEE--E-cC-CEEEEEeccCcCCCCEEEEeecCC
Confidence 4568999999999642 2 23 368899999999999999999643
No 25
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=96.78 E-value=0.00069 Score=58.57 Aligned_cols=52 Identities=19% Similarity=0.248 Sum_probs=45.1
Q ss_pred CCCccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHhCCCchHHHHHHHHhHh
Q 003377 168 IEPEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIGIATSEVQDRYSTLKE 222 (824)
Q Consensus 168 ~e~eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~~~~~seI~eRy~~L~~ 222 (824)
.+|.--|..||+.||.+|....++||-. -..+|++|+++..+|+.||..|+.
T Consensus 17 ldP~i~k~~wT~EED~~L~~l~~~~G~k---W~~IA~~lgRt~~q~knRw~~L~~ 68 (73)
T 2llk_A 17 QGDRNHVGKYTPEEIEKLKELRIKHGND---WATIGAALGRSASSVKDRCRLMKD 68 (73)
T ss_dssp --CCCCCCSSCHHHHHHHHHHHHHHSSC---HHHHHHHHTSCHHHHHHHHHHCSC
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHCCC---HHHHHHHhCCCHHHHHHHHHHHHH
Confidence 3455567899999999999999999976 788888889999999999999876
No 26
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=96.18 E-value=0.0026 Score=71.48 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=33.7
Q ss_pred ccccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecCC
Q 003377 746 KLKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYRY 791 (824)
Q Consensus 746 ~aRFINHSC~PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYgy 791 (824)
++=++||+|.||+.+ ..++ ..+.++|.|+|++|||||++||-
T Consensus 222 ~~D~~NH~~~~~~~~---~~~~-~~~~~~a~~~i~~Geei~~~YG~ 263 (449)
T 3qxy_A 222 AADILNHLANHNANL---EYSA-NCLRMVATQPIPKGHEIFNTYGQ 263 (449)
T ss_dssp TGGGCEECSSCSEEE---EECS-SEEEEEESSCBCTTCEEEECCSS
T ss_pred cHHHhcCCCCCCeEE---EEeC-CeEEEEECCCcCCCchhhccCCC
Confidence 345799999999853 2233 36889999999999999999974
No 27
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=96.10 E-value=0.0054 Score=52.97 Aligned_cols=54 Identities=9% Similarity=0.287 Sum_probs=46.3
Q ss_pred CCccccccCCcccchhhhhhHhhcCCc-HHHHHHHHHHh-CCCchHHHHHHHHhHh
Q 003377 169 EPEEEKHEFSDGEDRILWTVFEEHGLG-EEVINAVSQFI-GIATSEVQDRYSTLKE 222 (824)
Q Consensus 169 e~eeeK~eF~e~eD~ii~m~~qe~Gls-~~Vl~~l~q~~-~~~~seI~eRy~~L~~ 222 (824)
.++-.+..||..||.+|..+++.||.. ..=-..||++| |++..+|++||..|.+
T Consensus 13 ~~~~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~vpGRT~~qcr~Ry~~L~~ 68 (73)
T 2cqr_A 13 RARSAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCVPSKSKEDCIARYKLLVS 68 (73)
T ss_dssp TTTCSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGCSSSCHHHHHHHHHHHHS
T ss_pred ccccCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 344467789999999999999999964 33478999999 7999999999999987
No 28
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=96.08 E-value=0.0027 Score=70.67 Aligned_cols=44 Identities=20% Similarity=0.314 Sum_probs=33.6
Q ss_pred ccccCCCCCCcceeEEEEcC-------eeEEEEEEccCCCCCCeEEEecCC
Q 003377 748 KFANHSSNPNCFAKVMLVAG-------DHRVGIFAKEHIEASEELFYDYRY 791 (824)
Q Consensus 748 RFINHSC~PNc~~~~v~V~G-------~~rI~~fA~RDI~aGEELTfDYgy 791 (824)
=++||++.||.....|.+.+ ...+.+.|.|+|++|||||++||-
T Consensus 191 D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~ 241 (440)
T 2h21_A 191 DLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDL 241 (440)
T ss_dssp TSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCT
T ss_pred HhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCC
Confidence 47899999986434454433 457889999999999999999984
No 29
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=94.04 E-value=0.004 Score=53.06 Aligned_cols=47 Identities=13% Similarity=0.331 Sum_probs=44.5
Q ss_pred cCCcccchhhhhhHhhcCCcHHHHHHHHHHhCCCchHHHHHHHHhHh
Q 003377 176 EFSDGEDRILWTVFEEHGLGEEVINAVSQFIGIATSEVQDRYSTLKE 222 (824)
Q Consensus 176 eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~~~~~seI~eRy~~L~~ 222 (824)
-.|..||++|=.+.|+-|-+++-+..||+-|++++.+|++||..|.+
T Consensus 16 lWTReeDR~IL~~cq~~G~s~~tfa~iA~~Lnks~~QV~~RF~~Lm~ 62 (70)
T 2lr8_A 16 LWTRNDDRVILLECQKRGPSSKTFAYLAAKLDKNPNQVSERFQQLMK 62 (70)
Confidence 47888999999999999999999999999999999999999999975
No 30
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.84 E-value=0.02 Score=47.74 Aligned_cols=52 Identities=19% Similarity=0.276 Sum_probs=45.1
Q ss_pred CCccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHhCCCchHHHHHHHHhHhh
Q 003377 169 EPEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIGIATSEVQDRYSTLKEK 223 (824)
Q Consensus 169 e~eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~~~~~seI~eRy~~L~~k 223 (824)
.|.--|..||..||.+|-...+++|- --..||+++++++.++++||..+..+
T Consensus 4 ~P~~~k~~WT~eED~~L~~~~~~~g~---~W~~Ia~~~gRt~~qcr~Rw~~~l~~ 55 (66)
T 2din_A 4 GSSGKKTEWSREEEEKLLHLAKLMPT---QWRTIAPIIGRTAAQCLEHYEFLLDK 55 (66)
T ss_dssp SSSSSCCCCCHHHHHHHHHHHHHCTT---CHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCC---CHHHHhcccCcCHHHHHHHHHHHhCh
Confidence 45667889999999999999999997 36778889999999999999988654
No 31
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=94.72 E-value=0.017 Score=65.94 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=31.5
Q ss_pred cccccCCCCCCcceeEEEEcCeeEEEEEEccCCCCCCeEEEecC
Q 003377 747 LKFANHSSNPNCFAKVMLVAGDHRVGIFAKEHIEASEELFYDYR 790 (824)
Q Consensus 747 aRFINHSC~PNc~~~~v~V~G~~rI~~fA~RDI~aGEELTfDYg 790 (824)
+=++||+|.||.. .+.. ....+.++|.++|++|||||++||
T Consensus 273 ~Dm~NH~~~~~~~--~~~~-~~~~~~~~a~~~i~~Geei~isYG 313 (497)
T 3smt_A 273 WDMCNHTNGLITT--GYNL-EDDRCECVALQDFRAGEQIYIFYG 313 (497)
T ss_dssp GGGCEECSCSEEE--EEET-TTTEEEEEESSCBCTTCEEEECCC
T ss_pred HHhhcCCCcccce--eeec-cCCeEEEEeCCccCCCCEEEEeCC
Confidence 4479999999631 2322 334678899999999999999997
No 32
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=94.70 E-value=0.035 Score=47.15 Aligned_cols=54 Identities=9% Similarity=0.047 Sum_probs=44.9
Q ss_pred CccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHhhcCC
Q 003377 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEKYDG 226 (824)
Q Consensus 170 ~eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~k~~~ 226 (824)
|.=-|..||+.||.+|..++++||- --..||++| +++..+|+.||..+..+...
T Consensus 5 p~~~~~~WT~eEd~~l~~~~~~~G~---~W~~Ia~~~~~Rt~~q~k~r~~~~l~~~~~ 59 (72)
T 2cu7_A 5 SSGYSVKWTIEEKELFEQGLAKFGR---RWTKISKLIGSRTVLQVKSYARQYFKNKVK 59 (72)
T ss_dssp CSSCCCCCCHHHHHHHHHHHHHTCS---CHHHHHHHHSSSCHHHHHHHHHHHHHHHSC
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHCc---CHHHHHHHcCCCCHHHHHHHHHHHHHHHHh
Confidence 4445778999999999999999998 466778887 89999999999988765443
No 33
>2yqk_A Arginine-glutamic acid dipeptide repeats protein; structure genomics, SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.45 E-value=0.05 Score=45.38 Aligned_cols=44 Identities=27% Similarity=0.428 Sum_probs=38.7
Q ss_pred CCCCcHHHHHHHHHhhhhcCCchHHHHHhhhCCCCcHHHHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 501 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~N~C~iA~~ll~g~KTC~EV~~ym~ 501 (824)
...||.-|..+|+.++..||+|+-.|++.++ +.||-.||-+|..
T Consensus 9 ~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v-~~Kt~~~~v~fYY 52 (63)
T 2yqk_A 9 EKCWTEDEVKRFVKGLRQYGKNFFRIRKELL-PNKETGELITFYY 52 (63)
T ss_dssp CCSCCHHHHHHHHHHHHHTCSCHHHHHHHSC-TTSCHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHhCccHHHHHHHHc-CCCcHHHHHHHHh
Confidence 4689999999999999999999999998533 7899999988665
No 34
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=94.36 E-value=0.025 Score=46.32 Aligned_cols=45 Identities=22% Similarity=0.480 Sum_probs=39.6
Q ss_pred cccCCcccchhhhhhHhhcCCcHHHHHHHHHHhC--CCchHHHHHHHHh
Q 003377 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIG--IATSEVQDRYSTL 220 (824)
Q Consensus 174 K~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~~--~~~seI~eRy~~L 220 (824)
|..||..||.+|..++++||... -..||++|+ +++.++++||..+
T Consensus 9 ~~~WT~eED~~L~~~v~~~G~~~--W~~IA~~~~~~Rt~~qcr~r~~~~ 55 (58)
T 2elk_A 9 DENWGADEELLLIDACETLGLGN--WADIADYVGNARTKEECRDHYLKT 55 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTTC--HHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCC--HHHHHHHHCCCCCHHHHHHHHHHH
Confidence 56799999999999999999643 678899997 9999999999865
No 35
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.33 E-value=0.033 Score=47.55 Aligned_cols=53 Identities=8% Similarity=0.051 Sum_probs=44.0
Q ss_pred CccccccCCcccchhhhhhHhhcCCcH---HHHHHHHHHh-CCCchHHHHHH-HHhHh
Q 003377 170 PEEEKHEFSDGEDRILWTVFEEHGLGE---EVINAVSQFI-GIATSEVQDRY-STLKE 222 (824)
Q Consensus 170 ~eeeK~eF~e~eD~ii~m~~qe~Gls~---~Vl~~l~q~~-~~~~seI~eRy-~~L~~ 222 (824)
|.--|..||+.||.+|..++++||-.. .--..||++| +++..++++|| +.|..
T Consensus 4 p~~~~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~~~Rt~~qcr~r~~~~l~~ 61 (75)
T 2yum_A 4 GSSGNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASQVQKYFIK 61 (75)
T ss_dssp CCCCSSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHSSSCHHHHHHHHHHHHGG
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 455678999999999999999999643 4578889988 69999999999 55554
No 36
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.32 E-value=0.057 Score=44.60 Aligned_cols=43 Identities=26% Similarity=0.299 Sum_probs=38.2
Q ss_pred CCCCcHHHHHHHHHhhhhcCCchHHHHHhhhCCCCcHHHHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 501 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~N~C~iA~~ll~g~KTC~EV~~ym~ 501 (824)
...||+-|..||+.++..||+++-.||..| +.||-.+|-.|..
T Consensus 12 ~~~WT~eE~~~F~~~~~~~gk~w~~Ia~~l--~~rt~~~~v~~Yy 54 (61)
T 2eqr_A 12 MNVWTDHEKEIFKDKFIQHPKNFGLIASYL--ERKSVPDCVLYYY 54 (61)
T ss_dssp CCSCCHHHHHHHHHHHHHSTTCHHHHHHHC--TTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCHHHHHHHc--CCCCHHHHHHHHH
Confidence 468999999999999999999999999765 7799999977654
No 37
>2crg_A Metastasis associated protein MTA3; transcription factor, helix turn helix, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.3
Probab=94.30 E-value=0.054 Score=46.17 Aligned_cols=44 Identities=23% Similarity=0.420 Sum_probs=39.2
Q ss_pred CCCCcHHHHHHHHHhhhhcCCchHHHHHhhhCCCCcHHHHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 501 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~N~C~iA~~ll~g~KTC~EV~~ym~ 501 (824)
...||+-|..+|+.++..||+|+-.|++.+| ++||-.+|-+|..
T Consensus 8 ~~~WT~eE~~~Fe~~l~~yGKdf~~I~~~~v-~~Kt~~~~v~fYY 51 (70)
T 2crg_A 8 MEEWSASEACLFEEALEKYGKDFNDIRQDFL-PWKSLTSIIEYYY 51 (70)
T ss_dssp SCCCCHHHHHHHHHHHHHTCSCHHHHHHTTC-SSSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCccHHHHHHHHc-CCCCHHHHHHHHH
Confidence 5689999999999999999999999999533 7899999988765
No 38
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=94.26 E-value=0.025 Score=47.35 Aligned_cols=49 Identities=20% Similarity=0.293 Sum_probs=40.8
Q ss_pred ccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh---CCCchHHHHHHHHhHhh
Q 003377 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI---GIATSEVQDRYSTLKEK 223 (824)
Q Consensus 173 eK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~---~~~~seI~eRy~~L~~k 223 (824)
.|+.||+.||.+|...+++||-.. -..||+++ ++++.++++||..|.+.
T Consensus 10 kk~~WT~eED~~L~~~V~~~G~~~--W~~Ia~~~~~~~Rt~~qcr~Rw~nl~k~ 61 (64)
T 3sjm_A 10 KKQKWTVEESEWVKAGVQKYGEGN--WAAISKNYPFVNRTAVMIKDRWRTMKRL 61 (64)
T ss_dssp CCCCCCHHHHHHHHHHHHHHCTTC--HHHHHHHSCCSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHccCCCc--hHHHHhhcCCCCCCHHHHHHHHHHHhcc
Confidence 478899999999999999999643 45566643 79999999999998763
No 39
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=94.15 E-value=0.031 Score=44.33 Aligned_cols=46 Identities=17% Similarity=0.393 Sum_probs=39.6
Q ss_pred cccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhH
Q 003377 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (824)
Q Consensus 174 K~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~ 221 (824)
|..||..||.+|..++++||-.. -..||++| ++++.++++||..+-
T Consensus 3 ~~~Wt~eED~~L~~~v~~~G~~~--W~~Ia~~~~~Rt~~qcr~Rw~~~L 49 (52)
T 1guu_A 3 KTRWTREEDEKLKKLVEQNGTDD--WKVIANYLPNRTDVQCQHRWQKVL 49 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSC--HHHHHHTSTTCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCC--HHHHHHHcCCCCHHHHHHHHHHHc
Confidence 56799999999999999999722 57788888 899999999998764
No 40
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=93.80 E-value=0.036 Score=45.51 Aligned_cols=48 Identities=15% Similarity=0.255 Sum_probs=40.4
Q ss_pred ccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHh
Q 003377 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (824)
Q Consensus 173 eK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~ 222 (824)
-|..||..||.+|-.+++.||... -..||++| ++++.++++||...-.
T Consensus 7 ~~~~WT~eED~~L~~~v~~~G~~~--W~~Ia~~~~~Rt~~qcr~r~~~~l~ 55 (60)
T 1x41_A 7 GDPSWTAQEEMALLEAVMDCGFGN--WQDVANQMCTKTKEECEKHYMKYFS 55 (60)
T ss_dssp CCSSSCHHHHHHHHHHHHHTCTTC--HHHHHHHHTTSCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCc--HHHHHHHhCCCCHHHHHHHHHHHcc
Confidence 467899999999999999999743 56778887 5999999999987644
No 41
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=93.61 E-value=0.037 Score=45.26 Aligned_cols=51 Identities=14% Similarity=0.218 Sum_probs=42.1
Q ss_pred CccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHh
Q 003377 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (824)
Q Consensus 170 ~eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~ 222 (824)
|.--|..||+.||.+|.-++++||... -..||++| ++++.++++||..+-.
T Consensus 4 p~~~k~~Wt~eED~~L~~~v~~~G~~~--W~~Ia~~~~~Rt~~qcr~Rw~~~l~ 55 (60)
T 2d9a_A 4 GSSGKVKWTHEEDEQLRALVRQFGQQD--WKFLASHFPNRTDQQCQYRWLRVLS 55 (60)
T ss_dssp CCCCCSCCCHHHHHHHHHHHHHTCTTC--HHHHHHHCSSSCHHHHHHHHHHTSC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCC--HHHHHHHccCCCHHHHHHHHHHHcC
Confidence 344578899999999999999999522 56778877 7999999999987754
No 42
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=93.01 E-value=0.059 Score=43.05 Aligned_cols=47 Identities=19% Similarity=0.251 Sum_probs=39.4
Q ss_pred cccCCcccchhhhhhHhhcCCcHHHHHHHHHHhC---CCchHHHHHHHHhHh
Q 003377 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIG---IATSEVQDRYSTLKE 222 (824)
Q Consensus 174 K~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~~---~~~seI~eRy~~L~~ 222 (824)
|.-||+.||.+|.-.+++||.. --..||++|. +++.++++||..|..
T Consensus 2 r~~WT~eEd~~L~~~v~~~G~~--~W~~Ia~~~~~~~Rt~~qcr~Rw~~~~k 51 (53)
T 1w0t_A 2 RQAWLWEEDKNLRSGVRKYGEG--NWSKILLHYKFNNRTSVMLKDRWRTMKK 51 (53)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTT--CHHHHHHHSCCSSCCHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCcC--CHHHHHHHcCCCCCCHHHHHHHHHHHHc
Confidence 5679999999999999999953 2466677775 999999999998865
No 43
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=92.94 E-value=0.058 Score=46.37 Aligned_cols=50 Identities=14% Similarity=0.202 Sum_probs=43.5
Q ss_pred cccCCcccchhhhhhHhhcCCcH-HHHHHHHHHhCCCchHHHHHHHHhHhh
Q 003377 174 KHEFSDGEDRILWTVFEEHGLGE-EVINAVSQFIGIATSEVQDRYSTLKEK 223 (824)
Q Consensus 174 K~eF~e~eD~ii~m~~qe~Gls~-~Vl~~l~q~~~~~~seI~eRy~~L~~k 223 (824)
+..||..||.+|-.++..|+-.. .=.+.||++|+++..||+.||+.|.+.
T Consensus 8 ~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~lgRt~~eV~~~y~~L~~d 58 (72)
T 2cqq_A 8 APEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHELGRSVTDVTTKAKQLKDS 58 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHHTSCHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 45699999999999999998542 347899999999999999999999874
No 44
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=92.84 E-value=0.065 Score=50.11 Aligned_cols=51 Identities=22% Similarity=0.427 Sum_probs=44.8
Q ss_pred CccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHhh
Q 003377 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (824)
Q Consensus 170 ~eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~k 223 (824)
|.--|..||+.||.+|..++++||-. -..||++| +++..+|+.||..|..+
T Consensus 58 p~~~~~~WT~eEd~~L~~~v~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~l~~k 109 (126)
T 3osg_A 58 PSISHTPWTAEEDALLVQKIQEYGRQ---WAIIAKFFPGRTDIHIKNRWVTISNK 109 (126)
T ss_dssp TTSCCSCCCHHHHHHHHHHHHHHCSC---HHHHHTTSTTCCHHHHHHHHHHHHHH
T ss_pred cccccccCCHHHHHHHHHHHHHHCcC---HHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence 44456689999999999999999965 67888999 99999999999999875
No 45
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=92.83 E-value=0.063 Score=48.35 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=43.2
Q ss_pred cccCCcccchhhhhhHhhcCCcH-HHHHHHHHHh-CCCchHHHHHHHHhHhh
Q 003377 174 KHEFSDGEDRILWTVFEEHGLGE-EVINAVSQFI-GIATSEVQDRYSTLKEK 223 (824)
Q Consensus 174 K~eF~e~eD~ii~m~~qe~Gls~-~Vl~~l~q~~-~~~~seI~eRy~~L~~k 223 (824)
+..||..||.+|..+++.||... .=-..||++| |++..||++||+.|.+.
T Consensus 8 ~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~vpGRT~~q~k~ry~~l~~d 59 (93)
T 2cjj_A 8 GRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVED 59 (93)
T ss_dssp CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHSTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 56799999999999999999753 3468899999 69999999999999753
No 46
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=92.75 E-value=0.095 Score=47.59 Aligned_cols=50 Identities=20% Similarity=0.363 Sum_probs=43.7
Q ss_pred ccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHhh
Q 003377 171 EEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (824)
Q Consensus 171 eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~k 223 (824)
.--+..||+.||.+|..++++||-. -..||++| ++++.+|+.||..|..+
T Consensus 50 ~i~~~~WT~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~l~r~ 100 (107)
T 2k9n_A 50 ALRTDPWSPEEDMLLDQKYAEYGPK---WNKISKFLKNRSDNNIRNRWMMIARH 100 (107)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHTCSC---HHHHHHHHSSSCHHHHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHHHHHHHhCcC---HHHHHHHCCCCCHHHHHHHHHHHHhh
Confidence 3347789999999999999999974 67788888 99999999999999765
No 47
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=92.74 E-value=0.064 Score=48.30 Aligned_cols=51 Identities=18% Similarity=0.492 Sum_probs=44.0
Q ss_pred CccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHhh
Q 003377 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (824)
Q Consensus 170 ~eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~k 223 (824)
|.-.+..||+.||.+|..++++||-. -..||++| ++++.+|+.||..|..+
T Consensus 52 p~~~~~~Wt~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~~~~~ 103 (105)
T 1gv2_A 52 PEVKKTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAIKNHWNSTMRR 103 (105)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHSSC---HHHHHTTCTTCCHHHHHHHHHHHTC-
T ss_pred CcccccCCCHHHHHHHHHHHHHhCCC---HHHHHHHcCCCCHHHHHHHHHHHHhc
Confidence 44457889999999999999999964 67889999 99999999999988654
No 48
>1ug2_A 2610100B20RIK gene product; hypothetical protein, MYB-like DNA binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: a.4.1.3
Probab=92.16 E-value=0.074 Score=47.73 Aligned_cols=48 Identities=25% Similarity=0.443 Sum_probs=44.4
Q ss_pred cCCcccchhhhhhHhhcCCcHHHHHHHHHHhC-CCchHHHHHHHHhHhh
Q 003377 176 EFSDGEDRILWTVFEEHGLGEEVINAVSQFIG-IATSEVQDRYSTLKEK 223 (824)
Q Consensus 176 eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~~-~~~seI~eRy~~L~~k 223 (824)
..|..+|++|=.+.|+-|-+..-+..||+-|+ +++.||++||..|..-
T Consensus 35 lWTRe~DR~IL~~cQ~~G~s~~tFa~iA~~L~Nks~nqV~~RFq~Lm~L 83 (95)
T 1ug2_A 35 LWTREADRVILTMCQEQGAQPHTFSVISQQLGNKTPVEVSHRFRELMQL 83 (95)
T ss_dssp SSCHHHHHHHHHHHHHTTSCTTTHHHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred EeccccCHHHHHHHHhcCCChhHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 47888999999999999999999999999995 9999999999999753
No 49
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=91.97 E-value=0.068 Score=42.39 Aligned_cols=46 Identities=15% Similarity=0.296 Sum_probs=38.9
Q ss_pred cccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhH
Q 003377 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (824)
Q Consensus 174 K~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~ 221 (824)
|..||+.||.+|.-++++||-. --..||++| +++..++++||...-
T Consensus 3 k~~Wt~eED~~L~~~v~~~G~~--~W~~Ia~~~~~Rt~~qcr~Rw~~~L 49 (52)
T 1gvd_A 3 KGPWTKEEDQRLIKLVQKYGPK--RWSVIAKHLKGRIGKQCRERWHNHL 49 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTT--CHHHHHTTSTTCCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHHCcC--hHHHHHHHcCCCCHHHHHHHHHHHc
Confidence 5679999999999999999962 157778888 899999999998653
No 50
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=90.95 E-value=0.21 Score=51.64 Aligned_cols=44 Identities=20% Similarity=0.482 Sum_probs=40.1
Q ss_pred CCCCcHHHHHHHHHhhhhcCCchHHHHHhhhCCCCcHHHHHHHHHh
Q 003377 457 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMRD 502 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~N~C~iA~~ll~g~KTC~EV~~ym~~ 502 (824)
...||.-|..+|+.++..||+++..||+.| ++||-.+|-.|-..
T Consensus 133 s~~WTeEE~~lFleAl~kYGKDW~~IAk~V--gTKT~~QcKnfY~~ 176 (235)
T 2iw5_B 133 NARWTTEEQLLAVQAIRKYGRDFQAISDVI--GNKSVVQVKNFFVN 176 (235)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSCHHHHHHHH--SSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHc--CCCCHHHHHHHHHH
Confidence 467999999999999999999999999987 89999999887764
No 51
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=90.85 E-value=0.068 Score=46.64 Aligned_cols=47 Identities=19% Similarity=0.217 Sum_probs=41.0
Q ss_pred ccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHh
Q 003377 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (824)
Q Consensus 173 eK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~ 222 (824)
.+..||+.||.+|-.+++.|| .--..||++| ++++.++++||..|-.
T Consensus 17 ~~~~WT~eEd~~Ll~~v~~~G---~~W~~IA~~v~~RT~~qcr~r~~~~~i 64 (79)
T 2yus_A 17 AGREWTEQETLLLLEALEMYK---DDWNKVSEHVGSRTQDECILHFLRLPI 64 (79)
T ss_dssp CSCCCCHHHHHHHHHHHHHSS---SCHHHHHHHHSSCCHHHHHHHHTTSCC
T ss_pred cCCCcCHHHHHHHHHHHHHhC---CCHHHHHHHcCCCCHHHHHHHHHHhcc
Confidence 467899999999999999999 3478889999 5999999999998833
No 52
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=90.51 E-value=0.12 Score=48.25 Aligned_cols=51 Identities=20% Similarity=0.494 Sum_probs=44.1
Q ss_pred CccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHhh
Q 003377 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (824)
Q Consensus 170 ~eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~k 223 (824)
|.-.|..||+.||.+|-.++++||-. -..||++| |++..+|+.||..|..+
T Consensus 75 p~~~~~~WT~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~r~~~~~~~ 126 (128)
T 1h8a_C 75 PEVKKTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAVKNHWNSTMRR 126 (128)
T ss_dssp SSSCCSCCCHHHHHHHHHHHHHHCSC---HHHHGGGSTTCCHHHHHHHHHTTTTC
T ss_pred cccccccCCHHHHHHHHHHHHHHCcC---HHHHHHHCCCCCHHHHHHHHHHHHhc
Confidence 44457789999999999999999964 67788899 99999999999988764
No 53
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=90.38 E-value=0.15 Score=42.83 Aligned_cols=51 Identities=18% Similarity=0.258 Sum_probs=41.7
Q ss_pred ccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh---CCCchHHHHHHHHhHhh
Q 003377 171 EEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI---GIATSEVQDRYSTLKEK 223 (824)
Q Consensus 171 eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~---~~~~seI~eRy~~L~~k 223 (824)
---|.-||+.||.+|...+++||... -..||++| ++++.++++||..+...
T Consensus 7 ~~~r~~WT~eED~~L~~~v~~~G~~~--W~~Ia~~~~~~~Rt~~qcr~Rw~~~l~p 60 (69)
T 1ity_A 7 ARKRQAWLWEEDKNLRSGVRKYGEGN--WSKILLHYKFNNRTSVMLKDRWRTMKKL 60 (69)
T ss_dssp SSSCCCCCHHHHHHHHHHHHHHCSSC--HHHHHHHSCCSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCc--HHHHHHHcCcCCCCHHHHHHHHHHHcCC
Confidence 34577899999999999999999632 45566666 59999999999998764
No 54
>4a69_C Nuclear receptor corepressor 2; transcription, hydrolase; HET: I0P; 2.06A {Homo sapiens} PDB: 1xc5_A
Probab=89.77 E-value=0.39 Score=43.12 Aligned_cols=43 Identities=30% Similarity=0.295 Sum_probs=38.9
Q ss_pred CCCCcHHHHHHHHHhhhhcCCchHHHHHhhhCCCCcHHHHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 501 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~N~C~iA~~ll~g~KTC~EV~~ym~ 501 (824)
...||.-|+.+|..+...||+++-.||..| +.||-.++-.|..
T Consensus 43 ~~~WT~eE~~~F~~~~~~~gK~F~~Ia~~l--~~Kt~~~cV~~YY 85 (94)
T 4a69_C 43 MNMWSEQEKETFREKFMQHPKNFGLIASFL--ERKTVAECVLYYY 85 (94)
T ss_dssp TCCCCHHHHHHHHHHHHHSTTCHHHHHHTC--TTCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCHHHHHHHc--CCCCHHHHHHHHh
Confidence 578999999999999999999999999866 8999999987665
No 55
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.15 E-value=0.21 Score=41.98 Aligned_cols=48 Identities=13% Similarity=0.241 Sum_probs=40.0
Q ss_pred ccccCCcccchhhhhhHhhcCCcHHHHHHHHHHhC-CCchHHHHHHHHhHh
Q 003377 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFIG-IATSEVQDRYSTLKE 222 (824)
Q Consensus 173 eK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~~-~~~seI~eRy~~L~~ 222 (824)
-|.-||..||.+|..++++||-.. -..||++|. +++.++++||...-.
T Consensus 8 k~~~Wt~eED~~L~~~v~~~G~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~L~ 56 (70)
T 2dim_A 8 KGGVWRNTEDEILKAAVMKYGKNQ--WSRIASLLHRKSAKQCKARWYEWLD 56 (70)
T ss_dssp TTCCCCHHHHHHHHHHHHHTCSSC--HHHHHHHSTTCCHHHHHHHHHHTSC
T ss_pred CCCCCCHHHHHHHHHHHHHHCcCC--HHHHHHHhcCCCHHHHHHHHHHHcC
Confidence 467899999999999999999532 567788885 999999999987644
No 56
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=88.74 E-value=0.2 Score=53.10 Aligned_cols=37 Identities=27% Similarity=0.601 Sum_probs=30.1
Q ss_pred ccCCCCCC-----------CCCCCCcccCCCcccCCCCCCCccccccc
Q 003377 576 YTPCGCQS-----------MCGKQCPCLHNGTCCEKYCGCSKSCKNRF 612 (824)
Q Consensus 576 y~PC~c~~-----------~C~~~C~C~~~g~~Ce~~CgC~~~C~nRf 612 (824)
.+-|+|.. .|+.+|.+...-..|...|+|+..|.||.
T Consensus 63 ~~~C~C~~~~~~~~~~~~~~C~~~C~nr~~~~EC~~~C~C~~~C~Nr~ 110 (278)
T 3h6l_A 63 RMQCECTPLSKDERAQGEIACGEDCLNRLLMIECSSRCPNGDYCSNRR 110 (278)
T ss_dssp --CCCCCCCCHHHHHHTCCSSCTTCTTGGGTBCCCTTCTTGGGCSSCT
T ss_pred cceeeccCCCcccccccCCCCCCCCCCcceEeccCCCCCcCCCCCCcc
Confidence 56788864 78888888888889999999999999885
No 57
>2k9n_A MYB24; R2R3 domain, DNA-binding, nucleus, DNA binding protein; NMR {Trichomonas vaginalis} PDB: 2kdz_A
Probab=88.29 E-value=0.25 Score=44.78 Aligned_cols=45 Identities=20% Similarity=0.318 Sum_probs=37.5
Q ss_pred cccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHh
Q 003377 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTL 220 (824)
Q Consensus 174 K~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L 220 (824)
|..||..||.+|..+++.||..+ -..||++| ++++.++.+||...
T Consensus 1 K~~Wt~eED~~L~~~v~~~g~~~--W~~Ia~~~~~Rt~~qcr~Rw~~~ 46 (107)
T 2k9n_A 1 KVKFTEEEDLKLQQLVMRYGAKD--WIRISQLMITRNPRQCRERWNNY 46 (107)
T ss_dssp CCSSCHHHHHHHHHHHHHHCSSC--HHHHHHHTTTSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCC--HHHHhhhcCCCCHHHHHHHHHHH
Confidence 56799999999999999999632 56778888 79999999999764
No 58
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=88.09 E-value=0.37 Score=45.18 Aligned_cols=52 Identities=19% Similarity=0.422 Sum_probs=44.5
Q ss_pred CccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHhhc
Q 003377 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEKY 224 (824)
Q Consensus 170 ~eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~k~ 224 (824)
|.--|..||+.||.+|..++++||-. -..||++| +++..+|+.||..+..+.
T Consensus 50 p~~~~~~Wt~eEd~~L~~~~~~~G~~---W~~Ia~~l~gRt~~~~k~rw~~~l~~~ 102 (131)
T 3zqc_A 50 PAVVKHAWTPEEDETIFRNYLKLGSK---WSVIAKLIPGRTDNAIKNRWNSSISKR 102 (131)
T ss_dssp TTCCCSCCCHHHHHHHHHHHHHSCSC---HHHHTTTSTTCCHHHHHHHHHHTTGGG
T ss_pred ccccCCCCCHHHHHHHHHHHHHHCcC---HHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 44456789999999999999999975 67788899 999999999999887653
No 59
>1gv2_A C-MYB, MYB proto-oncogene protein; transcription, DNA binding, ION binding; 1.68A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 PDB: 1mse_C* 1msf_C* 1a5j_A 1idy_A 1idz_A 1mbj_A 1mbk_A
Probab=87.46 E-value=0.23 Score=44.60 Aligned_cols=46 Identities=13% Similarity=0.297 Sum_probs=39.9
Q ss_pred cccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhH
Q 003377 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (824)
Q Consensus 174 K~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~ 221 (824)
|..||+.||.+|..+++.||-.. -..||++| ++++.++.+||...-
T Consensus 4 k~~WT~eED~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~l 50 (105)
T 1gv2_A 4 KGPWTKEEDQRVIKLVQKYGPKR--WSVIAKHLKGRIGKQCRERWHNHL 50 (105)
T ss_dssp CSCCCHHHHHHHHHHHHHHCTTC--HHHHHTTSTTCCHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHhCCCc--HHHHhhhhcCCCHHHHHHHHHhcc
Confidence 67799999999999999999732 56788888 899999999998754
No 60
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=86.88 E-value=0.12 Score=45.79 Aligned_cols=51 Identities=16% Similarity=0.208 Sum_probs=42.8
Q ss_pred CccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHhh
Q 003377 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (824)
Q Consensus 170 ~eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~k 223 (824)
|.--+..||+.||.+|--.+++||-. -..||++| +++..+|++||..+..+
T Consensus 12 p~~~~~~WT~eEd~~l~~~~~~~G~~---W~~IA~~l~gRt~~q~k~r~~~~lrk 63 (89)
T 2ltp_A 12 ENLYFQGWTEEEMGTAKKGLLEHGRN---WSAIARMVGSKTVSQCKNFYFNYKKR 63 (89)
Confidence 34456689999999999999999974 77888888 79999999999877553
No 61
>2yus_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; SWI/SNF complex 155 kDa subunit, BRG1-associated factor 155; NMR {Homo sapiens}
Probab=86.88 E-value=1 Score=39.14 Aligned_cols=43 Identities=21% Similarity=0.331 Sum_probs=38.1
Q ss_pred CCCCcHHHHHHHHHhhhhcCCchHHHHHhhhCCCCcHHHHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 501 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~N~C~iA~~ll~g~KTC~EV~~ym~ 501 (824)
...||.-|..+|+.+|..||.|.-.||..| ++||=.|+-.+..
T Consensus 18 ~~~WT~eEd~~Ll~~v~~~G~~W~~IA~~v--~~RT~~qcr~r~~ 60 (79)
T 2yus_A 18 GREWTEQETLLLLEALEMYKDDWNKVSEHV--GSRTQDECILHFL 60 (79)
T ss_dssp SCCCCHHHHHHHHHHHHHSSSCHHHHHHHH--SSCCHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHhCCCHHHHHHHc--CCCCHHHHHHHHH
Confidence 567999999999999999999999999977 7899888876554
No 62
>2cu7_A KIAA1915 protein; nuclear protein, SANT domain, DNA binding, regulation of transcription, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=86.59 E-value=1.2 Score=37.58 Aligned_cols=40 Identities=35% Similarity=0.629 Sum_probs=35.2
Q ss_pred CCCCcHHHHHHHHHhhhhcCCchHHHHHhhhCCCCcHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVST 498 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~N~C~iA~~ll~g~KTC~EV~~ 498 (824)
...||.-|..+++.+|..||.+.-.||..| +.+|=.+|-.
T Consensus 9 ~~~WT~eEd~~l~~~~~~~G~~W~~Ia~~~--~~Rt~~q~k~ 48 (72)
T 2cu7_A 9 SVKWTIEEKELFEQGLAKFGRRWTKISKLI--GSRTVLQVKS 48 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHTCSCHHHHHHHH--SSSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHc--CCCCHHHHHH
Confidence 568999999999999999999999999976 6688777755
No 63
>1x41_A Transcriptional adaptor 2-like, isoform B; transcriptional adaptor protein2, transcriptional activation, MYB domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.1
Probab=86.37 E-value=1.2 Score=36.43 Aligned_cols=40 Identities=25% Similarity=0.239 Sum_probs=34.5
Q ss_pred CCCCcHHHHHHHHHhhhhcC-CchHHHHHhhhCCCCcHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSGLKTCMEVST 498 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg-~N~C~iA~~ll~g~KTC~EV~~ 498 (824)
...||+-|-.+++.+|..|| .|.-.||..| +.+|=.|+-.
T Consensus 8 ~~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~ 48 (60)
T 1x41_A 8 DPSWTAQEEMALLEAVMDCGFGNWQDVANQM--CTKTKEECEK 48 (60)
T ss_dssp CSSSCHHHHHHHHHHHHHTCTTCHHHHHHHH--TTSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCcHHHHHHHh--CCCCHHHHHH
Confidence 56799999999999999999 7999999987 6688777644
No 64
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=85.94 E-value=0.34 Score=46.73 Aligned_cols=51 Identities=18% Similarity=0.492 Sum_probs=43.7
Q ss_pred CccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHhh
Q 003377 170 PEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (824)
Q Consensus 170 ~eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~k 223 (824)
|.-.+..||+.||.+|-.++++||-. -..||++| +++..+|+.||..|..+
T Consensus 106 p~~~~~~WT~eEd~~L~~~~~~~g~~---W~~Ia~~l~gRt~~~~knr~~~~~r~ 157 (159)
T 1h89_C 106 PEVKKTSWTEEEDRIIYQAHKRLGNR---WAEIAKLLPGRTDNAIKNHWNSTMRR 157 (159)
T ss_dssp TTSCCSCCCHHHHHHHHHHHHHHCSC---HHHHHTTSTTCCHHHHHHHHHTTTCC
T ss_pred ccccccCCChHHHHHHHHHHHHHCCC---HHHHHHHCCCCCHHHHHHHHHHHHhc
Confidence 44457889999999999999999964 56778888 99999999999988664
No 65
>1h8a_C AMV V-MYB, MYB transforming protein; transcription/DNA; 2.23A {Avian myeloblastosis virus} SCOP: a.4.1.3 a.4.1.3
Probab=85.08 E-value=0.52 Score=43.88 Aligned_cols=53 Identities=15% Similarity=0.318 Sum_probs=43.6
Q ss_pred CCCccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHh
Q 003377 168 IEPEEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (824)
Q Consensus 168 ~e~eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~ 222 (824)
..|.--|..||+.||.+|..++++||-.. -..||++| ++++.++.+||..+-.
T Consensus 21 l~p~~~k~~Wt~eED~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~l~ 74 (128)
T 1h8a_C 21 LNPELNKGPWTKEEDQRVIEHVQKYGPKR--WSDIAKHLKGRIGKQCRERWHNHLN 74 (128)
T ss_dssp -CTTCCCSCCCHHHHHHHHHHHHHTCSCC--HHHHHHHSSSCCHHHHHHHHHHTTC
T ss_pred hCCCCCCCCCCHHHHHHHHHHHHHHCCCC--HHHHHHHhcCCcHHHHHHHHHHhcc
Confidence 34555688999999999999999999742 56788888 8999999999987543
No 66
>3osg_A MYB21; transcription-DNA complex, MYB2, R2R3 domain, DNA binding PR transcription factor; 2.00A {Trichomonas vaginalis} PDB: 3osf_A
Probab=84.93 E-value=0.42 Score=44.59 Aligned_cols=47 Identities=19% Similarity=0.350 Sum_probs=40.4
Q ss_pred cccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhH
Q 003377 172 EEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLK 221 (824)
Q Consensus 172 eeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~ 221 (824)
--|.-||..||.+|..+++.||. --..||++| ++++.++.+||...-
T Consensus 9 ~kk~~WT~eED~~L~~~v~~~G~---~W~~Ia~~~~~Rt~~qcr~Rw~~~l 56 (126)
T 3osg_A 9 AKKQKFTPEEDEMLKRAVAQHGS---DWKMIAATFPNRNARQCRDRWKNYL 56 (126)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHTT---CHHHHHHTCTTCCHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC---CHHHHHHHcCCCCHHHHHHHHhhhc
Confidence 34678999999999999999997 367788888 999999999998643
No 67
>2elk_A SPCC24B10.08C protein; hypothetical protein, structural genomics, NPPSFA; NMR {Schizosaccharomyces pombe}
Probab=84.81 E-value=1.2 Score=36.26 Aligned_cols=40 Identities=28% Similarity=0.371 Sum_probs=34.0
Q ss_pred CCCCcHHHHHHHHHhhhhcC-CchHHHHHhhhCC-CCcHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSG-LKTCMEVST 498 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg-~N~C~iA~~ll~g-~KTC~EV~~ 498 (824)
...||+-|-.+++.+|..|| .|.-.||+.| + .+|=.|+-.
T Consensus 9 ~~~WT~eED~~L~~~v~~~G~~~W~~IA~~~--~~~Rt~~qcr~ 50 (58)
T 2elk_A 9 DENWGADEELLLIDACETLGLGNWADIADYV--GNARTKEECRD 50 (58)
T ss_dssp CCCCCHHHHHHHHHHHHHTTTTCHHHHHHHH--CSSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCCHHHHHHHH--CCCCCHHHHHH
Confidence 46799999999999999999 8999999977 5 677666643
No 68
>2yum_A ZZZ3 protein, zinc finger ZZ-type-containing protein 3; transcription, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.48 E-value=1.3 Score=37.57 Aligned_cols=40 Identities=23% Similarity=0.259 Sum_probs=34.6
Q ss_pred CCCCcHHHHHHHHHhhhhcC------CchHHHHHhhhCCCCcHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFG------RNSCLIARNLLSGLKTCMEVST 498 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg------~N~C~iA~~ll~g~KTC~EV~~ 498 (824)
...||.-|..+|+.+|..|| .+.-.||..| +.+|=.||-.
T Consensus 8 ~~~WT~eEd~~L~~~v~~~g~~~~~~~~W~~IA~~~--~~Rt~~qcr~ 53 (75)
T 2yum_A 8 NQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADEL--GNRTAKQVAS 53 (75)
T ss_dssp SSCCCHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHH--SSSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHh--CCCCHHHHHH
Confidence 46899999999999999999 7899999987 6688777744
No 69
>1guu_A C-MYB, MYB proto-oncogene protein; transcription, transcription regulation, DNA binding, ION bindi proto-oncogene, nuclear protein, activator; 1.6A {Mus musculus} SCOP: a.4.1.3 PDB: 1mbe_A 1mbf_A
Probab=82.03 E-value=2 Score=33.71 Aligned_cols=40 Identities=28% Similarity=0.262 Sum_probs=33.3
Q ss_pred CCCCcHHHHHHHHHhhhhcCC-chHHHHHhhhCCCCcHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFGR-NSCLIARNLLSGLKTCMEVST 498 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~-N~C~iA~~ll~g~KTC~EV~~ 498 (824)
...||+-|..++..+|..||. +.-.||..| +.+|=.++-.
T Consensus 3 ~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~ 43 (52)
T 1guu_A 3 KTRWTREEDEKLKKLVEQNGTDDWKVIANYL--PNRTDVQCQH 43 (52)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHTS--TTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCHHHHHHHc--CCCCHHHHHH
Confidence 467999999999999999998 999999976 4566555543
No 70
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=80.48 E-value=1.6 Score=49.72 Aligned_cols=44 Identities=20% Similarity=0.482 Sum_probs=40.7
Q ss_pred CCCCcHHHHHHHHHhhhhcCCchHHHHHhhhCCCCcHHHHHHHHHh
Q 003377 457 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMRD 502 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~N~C~iA~~ll~g~KTC~EV~~ym~~ 502 (824)
...||.-|..+|+.++..||+|+-.||+.+ |+||-.+|-.|...
T Consensus 380 ~~~WT~eE~~~f~~al~~yGkdw~~IA~~V--gTKT~~Qvk~fy~~ 423 (482)
T 2xag_B 380 NARWTTEEQLLAVQAIRKYGRDFQAISDVI--GNKSVVQVKNFFVN 423 (482)
T ss_dssp CSCCCHHHHHHHHHHHHHHTTCHHHHHHHH--SSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCHHHHHHHh--CCCCHHHHHHHHHH
Confidence 467999999999999999999999999987 99999999888764
No 71
>2d9a_A B-MYB, MYB-related protein B; DNA binding, structural genomics, unknown function, NPPSFA; NMR {Mus musculus}
Probab=78.98 E-value=3.2 Score=33.60 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=33.7
Q ss_pred CCCCcHHHHHHHHHhhhhcC-CchHHHHHhhhCCCCcHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSGLKTCMEVST 498 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg-~N~C~iA~~ll~g~KTC~EV~~ 498 (824)
...||+-|..+++.+|..|| .+.-.||..| +.+|=.++-.
T Consensus 8 k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~ 48 (60)
T 2d9a_A 8 KVKWTHEEDEQLRALVRQFGQQDWKFLASHF--PNRTDQQCQY 48 (60)
T ss_dssp CSCCCHHHHHHHHHHHHHTCTTCHHHHHHHC--SSSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCCCHHHHHHHc--cCCCHHHHHH
Confidence 56799999999999999999 5999999986 4577666654
No 72
>1ign_A Protein (RAP1); RAP1,yeast,telomeres,homoeodomain, DNA binding protein/DNA complex; HET: DNA; 2.25A {Saccharomyces cerevisiae} SCOP: a.4.1.6 a.4.1.6 PDB: 3ukg_A
Probab=77.98 E-value=0.86 Score=47.50 Aligned_cols=51 Identities=18% Similarity=0.414 Sum_probs=43.6
Q ss_pred ccccCCcccchhhhhhHhhcCCc---HHHHHHHHHHh-CCCchHHHHHHHHhHhh
Q 003377 173 EKHEFSDGEDRILWTVFEEHGLG---EEVINAVSQFI-GIATSEVQDRYSTLKEK 223 (824)
Q Consensus 173 eK~eF~e~eD~ii~m~~qe~Gls---~~Vl~~l~q~~-~~~~seI~eRy~~L~~k 223 (824)
-|..||+.||.+|--.++++|-. ..-...||++| |++.-.|+.||..+-.+
T Consensus 7 ~k~~FT~EED~~Ile~v~k~Gn~r~ghk~W~~IAk~LpGRT~nsIRnRw~~~L~~ 61 (246)
T 1ign_A 7 NKASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSK 61 (246)
T ss_dssp -CCCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTTGG
T ss_pred CCCCCCHHHHHHHHHHHHHhCcCccccccHHHHHHHcCCCCHHHHHHHHHHHHhh
Confidence 36789999999999999999984 35578899988 89999999999997654
No 73
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=77.32 E-value=1.1 Score=37.58 Aligned_cols=49 Identities=16% Similarity=0.265 Sum_probs=40.8
Q ss_pred ccccCCcccchhhhhhHhhcCCcHHHHHHHH--HHh-CCCchHHHHHHHHhHhh
Q 003377 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVS--QFI-GIATSEVQDRYSTLKEK 223 (824)
Q Consensus 173 eK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~--q~~-~~~~seI~eRy~~L~~k 223 (824)
-++.||+.||..|.--+++||- -=-.|+. .|+ +|+.-+|+.||..|.+.
T Consensus 7 ~r~~WT~EE~~~L~~gV~k~G~--~W~~I~~~y~f~~~RT~VdLKdk~r~L~k~ 58 (62)
T 1x58_A 7 GRKDFTKEEVNYLFHGVKTMGN--HWNSILWSFPFQKGRRAVDLAHKYHRLISG 58 (62)
T ss_dssp CSSSCCHHHHHHHHHHHHHHCS--CHHHHHHHSCCCTTCCHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHHhH--hHHHHHHhCCCccCcccchHHHHHHHHHhc
Confidence 3678999999999999999997 3344554 365 99999999999999884
No 74
>2cqr_A RSGI RUH-043, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=76.39 E-value=4 Score=35.02 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=35.2
Q ss_pred ccCCCCcHHHHHHHHHhhhhcC----CchHHHHHhhhCCCCcHHHHHHH
Q 003377 455 LCSSEWKPIEKELYLKGVEIFG----RNSCLIARNLLSGLKTCMEVSTY 499 (824)
Q Consensus 455 ~~~~~W~~~E~~l~~k~v~~fg----~N~C~iA~~ll~g~KTC~EV~~y 499 (824)
.....||.-|..+|+.++..|| .+.=.||..| +.||=.||-.+
T Consensus 16 ~~~~~WT~eEd~~L~~al~~~g~~~~~rW~~IA~~v--pGRT~~qcr~R 62 (73)
T 2cqr_A 16 SAEEPWTQNQQKLLELALQQYPRGSSDCWDKIARCV--PSKSKEDCIAR 62 (73)
T ss_dssp CSSCCCCHHHHHHHHHHHHHSCSSSHHHHHHHGGGC--SSSCHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHc--CCCCHHHHHHH
Confidence 3467899999999999999999 6788999876 56887777543
No 75
>1h89_C C-MYB, MYB proto-oncogene protein; transcription/DNA; 2.45A {Mus musculus} SCOP: a.4.1.3 a.4.1.3 a.4.1.3 PDB: 1h88_C
Probab=75.86 E-value=1.5 Score=42.25 Aligned_cols=50 Identities=14% Similarity=0.267 Sum_probs=41.6
Q ss_pred ccccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHh
Q 003377 171 EEEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (824)
Q Consensus 171 eeeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~ 222 (824)
.-.|..||+.||.+|...+++||-.. -..||++| ++++.++++||..+-.
T Consensus 55 ~~~~~~Wt~eEd~~L~~~v~~~g~~~--W~~Ia~~l~~Rt~~qcr~Rw~~~l~ 105 (159)
T 1h89_C 55 ELIKGPWTKEEDQRVIKLVQKYGPKR--WSVIAKHLKGRIGKQCRERWHNHLN 105 (159)
T ss_dssp TCCCSCCCHHHHHHHHHHHHHHCSCC--HHHHHHTSTTCCHHHHHHHHHHTTC
T ss_pred CcCCCCCChHHHHHHHHHHHHhCccc--HHHHHHHcCCCCHHHHHHHHHHHhC
Confidence 33578899999999999999999632 45678888 9999999999987644
No 76
>1gvd_A MYB proto-oncogene protein; transcription, transcription regulation, C-MYB, DNA binding, ION binding, nuclear protein; 1.45A {Mus musculus} SCOP: a.4.1.3 PDB: 1gv5_A 1mbg_A 1mbh_A
Probab=75.56 E-value=3.5 Score=32.35 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=33.3
Q ss_pred CCCCcHHHHHHHHHhhhhcCC-chHHHHHhhhCCCCcHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFGR-NSCLIARNLLSGLKTCMEVST 498 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~-N~C~iA~~ll~g~KTC~EV~~ 498 (824)
...||+-|-.++..+|..||. |.-.||..| +.+|=.++-.
T Consensus 3 k~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~~--~~Rt~~qcr~ 43 (52)
T 1gvd_A 3 KGPWTKEEDQRLIKLVQKYGPKRWSVIAKHL--KGRIGKQCRE 43 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCTTCHHHHHTTS--TTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcChHHHHHHHc--CCCCHHHHHH
Confidence 467999999999999999997 799999976 5577666644
No 77
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=74.45 E-value=1.7 Score=46.39 Aligned_cols=37 Identities=38% Similarity=1.012 Sum_probs=29.3
Q ss_pred cCCCCCC--CCCC----CCcccCCC----------------------cccCCCCCCCcccccccC
Q 003377 577 TPCGCQS--MCGK----QCPCLHNG----------------------TCCEKYCGCSKSCKNRFR 613 (824)
Q Consensus 577 ~PC~c~~--~C~~----~C~C~~~g----------------------~~Ce~~CgC~~~C~nRf~ 613 (824)
..|+|.. .|.. +|.|.... ..|...|+|+..|.||..
T Consensus 67 ~gC~C~~~~~C~~~~~~~C~C~~~~~~~~~~~y~~~g~l~~~~~~~i~EC~~~C~C~~~C~Nr~~ 131 (299)
T 1mvh_A 67 SGCNCSSLGGCDLNNPSRCECLDDLDEPTHFAYDAQGRVRADTGAVIYECNSFCSCSMECPNRVV 131 (299)
T ss_dssp CCCCCCCSSSSCTTCTTTCSSSTTCCSSCCCSBCTTSSBCTTCCSEEECCCTTSCSCTTCTTCTG
T ss_pred CCCcCcCCCCcCCCCCCCCccccccccccccccCCCCceeecCCCCeEeCCCCCCCCCCcCCccc
Confidence 5699984 8986 79998543 478899999999999864
No 78
>3zqc_A MYB3; transcription-DNA complex, DNA-binding protein, nucleus; 2.90A {Trichomonas vaginalis}
Probab=73.49 E-value=0.67 Score=43.45 Aligned_cols=42 Identities=17% Similarity=0.425 Sum_probs=21.0
Q ss_pred ccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHH
Q 003377 175 HEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYS 218 (824)
Q Consensus 175 ~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~ 218 (824)
--||..||.+|..++++||..+ -..||++| ++++.++.+||.
T Consensus 3 g~Wt~eED~~L~~~v~~~g~~~--W~~Ia~~~~~Rt~~qcr~Rw~ 45 (131)
T 3zqc_A 3 GPFTEAEDDLIREYVKENGPQN--WPRITSFLPNRSPKQCRERWF 45 (131)
T ss_dssp SSCCHHHHHHHHHHHHHHCSCC--GGGGTTSCTTSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCcCC--HHHHHHHHCCCCHHHHHHHHh
Confidence 3455555555555555555321 23444444 555555555553
No 79
>2dim_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.40 E-value=5.5 Score=33.21 Aligned_cols=40 Identities=23% Similarity=0.328 Sum_probs=34.0
Q ss_pred CCCCcHHHHHHHHHhhhhcC-CchHHHHHhhhCCCCcHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSGLKTCMEVST 498 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg-~N~C~iA~~ll~g~KTC~EV~~ 498 (824)
...||+-|-.+++.+|..|| .|.-.||..| +.+|=.++-.
T Consensus 9 ~~~Wt~eED~~L~~~v~~~G~~~W~~Ia~~l--~~Rt~~qcr~ 49 (70)
T 2dim_A 9 GGVWRNTEDEILKAAVMKYGKNQWSRIASLL--HRKSAKQCKA 49 (70)
T ss_dssp TCCCCHHHHHHHHHHHHHTCSSCHHHHHHHS--TTCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCcCCHHHHHHHh--cCCCHHHHHH
Confidence 46799999999999999999 7999999987 5677666654
No 80
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=73.30 E-value=1.5 Score=47.14 Aligned_cols=49 Identities=22% Similarity=0.350 Sum_probs=38.9
Q ss_pred ccccCCcccchhhhhhHhhcCCcH-HHHHHHH-------------HHhCCCchHHHHHHHHhH
Q 003377 173 EKHEFSDGEDRILWTVFEEHGLGE-EVINAVS-------------QFIGIATSEVQDRYSTLK 221 (824)
Q Consensus 173 eK~eF~e~eD~ii~m~~qe~Gls~-~Vl~~l~-------------q~~~~~~seI~eRy~~L~ 221 (824)
-++.||+.||++|=+.+..||+.- .+-+.|. =|.++||.||+.|+..|.
T Consensus 211 k~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwf~kSRTp~el~rRc~tLi 273 (304)
T 1ofc_X 211 KGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIRASPQFRFDWFIKSRTALELQRRCNTLI 273 (304)
T ss_dssp CCSSCCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHCGGGTTCHHHHTCCHHHHHHHHHHHH
T ss_pred CCCccCHHHHHHHHHHHHHhcCCCcchHHHHHHHHHhCcchhhhHHHhcCCHHHHHHHHHHHH
Confidence 457899999999999999999932 3444443 234899999999999984
No 81
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=71.84 E-value=2.1 Score=37.66 Aligned_cols=47 Identities=21% Similarity=0.207 Sum_probs=36.9
Q ss_pred cCCcccchhhhhhHhhcCCcHHHHHHHHH----HhCCCchHHHHHHHHhHhh
Q 003377 176 EFSDGEDRILWTVFEEHGLGEEVINAVSQ----FIGIATSEVQDRYSTLKEK 223 (824)
Q Consensus 176 eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q----~~~~~~seI~eRy~~L~~k 223 (824)
-||+.||.+|...+++||-.. =-.|+.. |-+|+.-+|+.||..|...
T Consensus 2 ~WT~eEd~~L~~gv~k~G~g~-W~~I~~~~~~~~~~RT~~~lKdrWrnllk~ 52 (83)
T 2ckx_A 2 PFSVAEVEALVEAVEHLGTGR-WRDVKMRAFDNADHRTYVDLKDKWKTLVHT 52 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSC-HHHHHHHHCTTCTTSCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCC-cHHHHHhhccccCCCCHHHHHHHHHHHHHh
Confidence 589999999999999999832 1122222 5699999999999999764
No 82
>2y9y_A Imitation switch protein 1 (DEL_ATPase); transcription, nuclear protein complex, chromatin remodeling nucleosome remodeling; 3.25A {Saccharomyces cerevisiae} PDB: 2y9z_A
Probab=71.62 E-value=2.6 Score=46.48 Aligned_cols=48 Identities=29% Similarity=0.376 Sum_probs=39.4
Q ss_pred cccCCcccchhhhhhHhhcCC-----cHHHHHHHHH---------HhCCCchHHHHHHHHhH
Q 003377 174 KHEFSDGEDRILWTVFEEHGL-----GEEVINAVSQ---------FIGIATSEVQDRYSTLK 221 (824)
Q Consensus 174 K~eF~e~eD~ii~m~~qe~Gl-----s~~Vl~~l~q---------~~~~~~seI~eRy~~L~ 221 (824)
++.||+.||++|=+.+-.||+ =|.+...+.. |-++||.||+.|++.|.
T Consensus 228 ~k~yteeEDRfLL~~l~k~G~~~~g~we~Ir~~Ir~~p~FrFDwF~kSRT~~EL~rRc~tLi 289 (374)
T 2y9y_A 228 KRTYSEEEDRFILLMLFKYGLDRDDVYELVRDEIRDCPLFELDFYFRSRTPVELARRGNTLL 289 (374)
T ss_dssp CCCSCHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHCSGGGSCHHHHTCCHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCcchhhhHHHhcCCHHHHHHHHHHHH
Confidence 578999999999999999999 5666544443 34899999999999995
No 83
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=71.26 E-value=1.7 Score=46.11 Aligned_cols=39 Identities=28% Similarity=0.736 Sum_probs=29.8
Q ss_pred cccCCCCCCCCCC-CCcccCC-----------------------CcccCCCCCCCcccccccC
Q 003377 575 QYTPCGCQSMCGK-QCPCLHN-----------------------GTCCEKYCGCSKSCKNRFR 613 (824)
Q Consensus 575 ~y~PC~c~~~C~~-~C~C~~~-----------------------g~~Ce~~CgC~~~C~nRf~ 613 (824)
++..|+|.+.|.. .|+|... -..|...|+|+..|.||..
T Consensus 79 ~~~gC~C~~~C~~~~C~C~~~~~~~~y~~~g~l~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~ 141 (287)
T 3hna_A 79 HLQYCVCIDDCSSSNCMCGQLSMRCWYDKDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVV 141 (287)
T ss_dssp GCCCCCCSSSSCSTTCHHHHHTSSCCBCTTSCBCTTCCSSSCCCEECCCTTSSSCTTCSSCSG
T ss_pred CCCCCcCcCCCCCCCCcCcccCcccccCCCCcccccccccCCceEEecCCCCCCCCCCCCccc
Confidence 4668999999984 8999741 1368888888888888763
No 84
>1w0t_A Telomeric repeat binding factor 1; telomere, DNA-binding protein, homeodomain, mitosis, cell cycle; 2.00A {Homo sapiens} SCOP: a.4.1.4 PDB: 1ba5_A
Probab=71.06 E-value=4.4 Score=32.01 Aligned_cols=29 Identities=24% Similarity=0.279 Sum_probs=26.7
Q ss_pred CCCcHHHHHHHHHhhhhcC-CchHHHHHhh
Q 003377 458 SEWKPIEKELYLKGVEIFG-RNSCLIARNL 486 (824)
Q Consensus 458 ~~W~~~E~~l~~k~v~~fg-~N~C~iA~~l 486 (824)
..||+-|-.++..+|..|| .|.-.||..+
T Consensus 3 ~~WT~eEd~~L~~~v~~~G~~~W~~Ia~~~ 32 (53)
T 1w0t_A 3 QAWLWEEDKNLRSGVRKYGEGNWSKILLHY 32 (53)
T ss_dssp CCCCHHHHHHHHHHHHHHCTTCHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHCcCCHHHHHHHc
Confidence 4699999999999999999 6999999976
No 85
>2ltp_A Nuclear receptor corepressor 2; SMRT, TRAC, SGC, structural genomics consortium, NESG, north structural genomics consortium; NMR {Homo sapiens}
Probab=73.33 E-value=0.88 Score=40.25 Aligned_cols=42 Identities=31% Similarity=0.373 Sum_probs=35.7
Q ss_pred CCCCcHHHHHHHHHhhhhcCCchHHHHHhhhCCCCcHHHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYM 500 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~N~C~iA~~ll~g~KTC~EV~~ym 500 (824)
...||.-|..++..++..||.++..||..| +.+|=.+|-.+-
T Consensus 16 ~~~WT~eEd~~l~~~~~~~G~~W~~IA~~l--~gRt~~q~k~r~ 57 (89)
T 2ltp_A 16 FQGWTEEEMGTAKKGLLEHGRNWSAIARMV--GSKTVSQCKNFY 57 (89)
Confidence 567999999999999999999999999976 668877775433
No 86
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=69.99 E-value=2.2 Score=36.83 Aligned_cols=47 Identities=19% Similarity=0.241 Sum_probs=40.2
Q ss_pred cCCcccchhhhhhHhhcCCcH-HHHHHHHHHhC-CCchHHHHHHHHhHh
Q 003377 176 EFSDGEDRILWTVFEEHGLGE-EVINAVSQFIG-IATSEVQDRYSTLKE 222 (824)
Q Consensus 176 eF~e~eD~ii~m~~qe~Gls~-~Vl~~l~q~~~-~~~seI~eRy~~L~~ 222 (824)
..|+.|+.+|.-+++.|+... .--+.||.+|+ ++..|++.||+.|..
T Consensus 10 ~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V~gKT~eE~~~hY~~l~~ 58 (73)
T 1wgx_A 10 EWNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKYMENPR 58 (73)
T ss_dssp CCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHTTTSCHHHHHHHHHHSSS
T ss_pred CCCHHHHHHHHHHHHHCCCCCccHHHHHHHHcCCCCHHHHHHHHHHHHh
Confidence 489999999999999998643 34688999995 999999999999965
No 87
>1ity_A TRF1; helix-turn-helix, telomeres, DNA binding, MYB domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: a.4.1.4 PDB: 1iv6_A
Probab=68.85 E-value=4.9 Score=33.47 Aligned_cols=43 Identities=21% Similarity=0.191 Sum_probs=33.4
Q ss_pred CCCCcHHHHHHHHHhhhhcC-CchHHHHHhhhCC--CCc---HHHHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFG-RNSCLIARNLLSG--LKT---CMEVSTYMR 501 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg-~N~C~iA~~ll~g--~KT---C~EV~~ym~ 501 (824)
...||+-|-.++..+|..|| .+.-.||..| + .+| |.+=|..+.
T Consensus 10 r~~WT~eED~~L~~~v~~~G~~~W~~Ia~~~--~~~~Rt~~qcr~Rw~~~l 58 (69)
T 1ity_A 10 RQAWLWEEDKNLRSGVRKYGEGNWSKILLHY--KFNNRTSVMLKDRWRTMK 58 (69)
T ss_dssp CCCCCHHHHHHHHHHHHHHCSSCHHHHHHHS--CCSSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCcHHHHHHHc--CcCCCCHHHHHHHHHHHc
Confidence 46799999999999999999 6999999976 4 455 444444443
No 88
>2llk_A Cyclin-D-binding MYB-like transcription factor 1; helix bundle, SGC, structural genomics consortium, NESG, NOR structural genomics consortium; NMR {Homo sapiens}
Probab=68.06 E-value=3.8 Score=35.19 Aligned_cols=40 Identities=18% Similarity=0.122 Sum_probs=32.9
Q ss_pred cCCCCcHHHHHHHHHhhhhcCCchHHHHHhhhCCCCcHHHHHH
Q 003377 456 CSSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVST 498 (824)
Q Consensus 456 ~~~~W~~~E~~l~~k~v~~fg~N~C~iA~~ll~g~KTC~EV~~ 498 (824)
....||+-|..++..++..||.+...||+.| .+|=.+|-.
T Consensus 22 ~k~~wT~EED~~L~~l~~~~G~kW~~IA~~l---gRt~~q~kn 61 (73)
T 2llk_A 22 HVGKYTPEEIEKLKELRIKHGNDWATIGAAL---GRSASSVKD 61 (73)
T ss_dssp CCCSSCHHHHHHHHHHHHHHSSCHHHHHHHH---TSCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHh---CCCHHHHHH
Confidence 3578999999999999999999999999987 355445533
No 89
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=67.85 E-value=4.4 Score=37.22 Aligned_cols=50 Identities=20% Similarity=0.174 Sum_probs=39.3
Q ss_pred ccccCCcccchhhhhhHhhcCCcHHHHHHHHH----HhCCCchHHHHHHHHhHhh
Q 003377 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQ----FIGIATSEVQDRYSTLKEK 223 (824)
Q Consensus 173 eK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q----~~~~~~seI~eRy~~L~~k 223 (824)
-|.-||+.||.+|...+++||-.. =-.|+.. |-+||.-+|+.||..|...
T Consensus 12 ~r~~WT~EEd~~L~~gV~k~G~g~-W~~I~~~~~~~f~~RT~v~lKdrWrnllk~ 65 (105)
T 2aje_A 12 IRRPFSVAEVEALVQAVEKLGTGR-WRDVKLCAFEDADHRTYVDLKDKWKTLVHT 65 (105)
T ss_dssp CCCSCCHHHHHHHHHHHHHHCSSS-HHHHHSSSSSSTTCCCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCC-hHHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 467899999999999999999832 1122222 3599999999999999864
No 90
>3sjm_A Telomeric repeat-binding factor 2; human telomeric repeat binding protein 2, telomere, telomeri homeodomain proteins amino acid sequence; HET: DNA; 1.35A {Homo sapiens} PDB: 1xg1_A 1vfc_A 1vf9_A 1w0u_A
Probab=67.51 E-value=8.3 Score=31.99 Aligned_cols=45 Identities=24% Similarity=0.305 Sum_probs=33.7
Q ss_pred CCCCcHHHHHHHHHhhhhcCC-chHHHHHhhhCCCCc---HHHHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFGR-NSCLIARNLLSGLKT---CMEVSTYMR 501 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~-N~C~iA~~ll~g~KT---C~EV~~ym~ 501 (824)
...||+-|-.++..+|..||. +...||..+....+| |.+=|.-|.
T Consensus 11 k~~WT~eED~~L~~~V~~~G~~~W~~Ia~~~~~~~Rt~~qcr~Rw~nl~ 59 (64)
T 3sjm_A 11 KQKWTVEESEWVKAGVQKYGEGNWAAISKNYPFVNRTAVMIKDRWRTMK 59 (64)
T ss_dssp CCCCCHHHHHHHHHHHHHHCTTCHHHHHHHSCCSSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHccCCCchHHHHhhcCCCCCCHHHHHHHHHHHh
Confidence 467999999999999999995 899999875212355 555555444
No 91
>2din_A Cell division cycle 5-like protein; MYB_DNA-binding domain, cell cycle, DNA binding, spliceosome, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.39 E-value=6.7 Score=32.29 Aligned_cols=39 Identities=23% Similarity=0.341 Sum_probs=32.3
Q ss_pred cCCCCcHHHHHHHHHhhhhcCCchHHHHHhhhCCCCcHHHHH
Q 003377 456 CSSEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVS 497 (824)
Q Consensus 456 ~~~~W~~~E~~l~~k~v~~fg~N~C~iA~~ll~g~KTC~EV~ 497 (824)
....||.-|..++..++..||.+.-.||. +. | +|=.++-
T Consensus 8 ~k~~WT~eED~~L~~~~~~~g~~W~~Ia~-~~-g-Rt~~qcr 46 (66)
T 2din_A 8 KKTEWSREEEEKLLHLAKLMPTQWRTIAP-II-G-RTAAQCL 46 (66)
T ss_dssp SCCCCCHHHHHHHHHHHHHCTTCHHHHHH-HH-S-SCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCHHHHhc-cc-C-cCHHHHH
Confidence 35679999999999999999999999999 43 4 7655553
No 92
>2juh_A Telomere binding protein TBP1; helix, nucleus, nuclear protein; NMR {Nicotiana glutinosa}
Probab=65.53 E-value=3.8 Score=38.53 Aligned_cols=50 Identities=20% Similarity=0.201 Sum_probs=39.3
Q ss_pred cccccCCcccchhhhhhHhhcCCcHHHHHHHHHH----hCCCchHHHHHHHHhHh
Q 003377 172 EEKHEFSDGEDRILWTVFEEHGLGEEVINAVSQF----IGIATSEVQDRYSTLKE 222 (824)
Q Consensus 172 eeK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~----~~~~~seI~eRy~~L~~ 222 (824)
--|.-||..||.+|.-.+++||-.. =-.|+..+ -+|+.-+|+.||..|..
T Consensus 15 r~r~~WT~EEd~~L~~gV~k~G~G~-W~~Ia~~~~~~f~~RT~v~lKdRWrnllk 68 (121)
T 2juh_A 15 RIRRPFSVAEVEALVEAVEHLGTGR-WRDVKMRAFDNADHRTYVDLKDKWKTLVH 68 (121)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHGGGC-HHHHHHHHCSCCSSCCSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCC-HHHHHHHhccccCCCCHHHHHHHHHHHHh
Confidence 3577899999999999999999632 11233332 59999999999999986
No 93
>2roh_A RTBP1, telomere binding protein-1; plant, nucleus, DNA binding protein; NMR {Oryza sativa}
Probab=61.75 E-value=4 Score=38.47 Aligned_cols=50 Identities=18% Similarity=0.224 Sum_probs=38.9
Q ss_pred ccccCCcccchhhhhhHhhcCCcHHHHHHHHH----HhCCCchHHHHHHHHhHhh
Q 003377 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQ----FIGIATSEVQDRYSTLKEK 223 (824)
Q Consensus 173 eK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q----~~~~~~seI~eRy~~L~~k 223 (824)
-|.-||..||.+|.-.+++||-..= -.|+.. |-+|+.-+|+.||..|.+.
T Consensus 30 ~r~~WT~EEd~~L~~gV~k~G~g~W-~~I~~~~~~~~~~RT~vdlKdRWrnllk~ 83 (122)
T 2roh_A 30 IRRPFTVAEVELLVEAVEHLGTGRW-RDVKFRAFENVHHRTYVDLKDKWKTLVHT 83 (122)
T ss_dssp CCCCCCHHHHHHHHHHHHHHSSSCH-HHHHHHHHSSSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCh-HHHHHHhccccCCCCHHHHHHHHHHHHhh
Confidence 4788999999999999999997321 122222 3599999999999999853
No 94
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=60.17 E-value=5.3 Score=44.42 Aligned_cols=30 Identities=17% Similarity=-0.049 Sum_probs=27.5
Q ss_pred ccEEEEecCCCCcceeeccccCCCCeeeee
Q 003377 675 QRILLAKSDVAGWGAFLKNSVSKNDYLGEY 704 (824)
Q Consensus 675 ~~l~V~kS~~kG~GLfA~edI~kGefI~EY 704 (824)
..|+++.++.+|.||+|+++|++|+.|..-
T Consensus 7 ~~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e 36 (433)
T 3qww_A 7 GGLERFCSAGKGRGLRALRPFHVGDLLFSC 36 (433)
T ss_dssp TTEEEEECTTSCEEEEESSCBCTTCEEEEE
T ss_pred CcEEEeecCCCcCeEEECCCCCCCCEEEec
Confidence 679999999999999999999999998753
No 95
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=59.87 E-value=5.6 Score=42.20 Aligned_cols=21 Identities=33% Similarity=0.975 Sum_probs=15.6
Q ss_pred cccCCCCC-CCCC-CCCcccCCC
Q 003377 575 QYTPCGCQ-SMCG-KQCPCLHNG 595 (824)
Q Consensus 575 ~y~PC~c~-~~C~-~~C~C~~~g 595 (824)
.+..|+|. +.|. ..|+|...+
T Consensus 58 ~~~gC~C~~~~C~~~~C~C~~~~ 80 (290)
T 3bo5_A 58 TFPGCICVKTPCLPGTCSCLRHG 80 (290)
T ss_dssp CCCCCCCCSSCCCTTTCGGGTTS
T ss_pred cCCCCCCCCCCcCCCCCcchhhc
Confidence 35689997 4787 579998754
No 96
>2cjj_A Radialis; plant development, DNA-binding protein, MYB transcription FA DNA-binding, nuclear protein, floral asymmetry; 1.9A {Antirrhinum majus} SCOP: a.4.1.3
Probab=57.40 E-value=15 Score=32.94 Aligned_cols=42 Identities=17% Similarity=0.301 Sum_probs=34.4
Q ss_pred CCCCcHHHHHHHHHhhhhcC----CchHHHHHhhhCCCCcHHHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFG----RNSCLIARNLLSGLKTCMEVSTYM 500 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg----~N~C~iA~~ll~g~KTC~EV~~ym 500 (824)
...||.-|..+|+.++..|| ...=.||..| +.||=.||-.+-
T Consensus 8 ~~~WT~eEd~~L~~al~~~~~~~~~rW~~IA~~v--pGRT~~q~k~ry 53 (93)
T 2cjj_A 8 GRPWSAKENKAFERALAVYDKDTPDRWANVARAV--EGRTPEEVKKHY 53 (93)
T ss_dssp CCSCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHS--TTCCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCCchHHHHHHHc--CCCCHHHHHHHH
Confidence 46799999999999999996 5688999976 569877775543
No 97
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=57.18 E-value=6.3 Score=44.58 Aligned_cols=31 Identities=13% Similarity=0.042 Sum_probs=28.1
Q ss_pred cccEEEEecCCCCcceeeccccCCCCeeeee
Q 003377 674 QQRILLAKSDVAGWGAFLKNSVSKNDYLGEY 704 (824)
Q Consensus 674 ~~~l~V~kS~~kG~GLfA~edI~kGefI~EY 704 (824)
...|+|..++.+|.||+|+++|++|+.|..-
T Consensus 6 ~~~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e 36 (490)
T 3n71_A 6 MENVEVFTSEGKGRGLKATKEFWAADVIFAE 36 (490)
T ss_dssp CTTEEEEECSSSCEEEEESSCBCTTCEEEEE
T ss_pred CCceEEEecCCCCceEEeccCCCCCCEEEec
Confidence 4679999999999999999999999999753
No 98
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=52.55 E-value=8.7 Score=42.46 Aligned_cols=30 Identities=10% Similarity=0.017 Sum_probs=27.1
Q ss_pred cccEEEEecCCCCcceeeccccCCCCeeee
Q 003377 674 QQRILLAKSDVAGWGAFLKNSVSKNDYLGE 703 (824)
Q Consensus 674 ~~~l~V~kS~~kG~GLfA~edI~kGefI~E 703 (824)
...|+.+.++.+|.||+|+++|++|+.|..
T Consensus 4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~ 33 (429)
T 3qwp_A 4 PLKVEKFATANRGNGLRAVTPLRPGELLFR 33 (429)
T ss_dssp CCSEEEEECSSSSEEEEESSCBCTTCEEEE
T ss_pred ccceeecccCCCCCeEEeCCCCCCCCEEEe
Confidence 456888889999999999999999999876
No 99
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=51.77 E-value=6.4 Score=39.96 Aligned_cols=30 Identities=23% Similarity=0.450 Sum_probs=26.2
Q ss_pred CCCCCCcccCCCcccCC-CCCCCcccccccC
Q 003377 584 MCGKQCPCLHNGTCCEK-YCGCSKSCKNRFR 613 (824)
Q Consensus 584 ~C~~~C~C~~~g~~Ce~-~CgC~~~C~nRf~ 613 (824)
.|+.+|.+......|.. .|+|+..|.||..
T Consensus 37 ~c~~~C~nr~~~~EC~~~~C~C~~~C~Nr~~ 67 (222)
T 3ope_A 37 GCVDDCLNRMIFAECSPNTCPCGEQCCNQRI 67 (222)
T ss_dssp SSCSCCTTGGGTBCCCTTTCTTTTSCSSCTT
T ss_pred CCcccCcCcCeEeEeCCCCCcCCCCCCCceE
Confidence 56789999999999997 8999999999853
No 100
>2xag_B REST corepressor 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_B* 2xah_B* 2xaj_B* 2xaq_B* 2xas_B*
Probab=51.35 E-value=3.1 Score=47.31 Aligned_cols=42 Identities=19% Similarity=0.315 Sum_probs=0.0
Q ss_pred CCCcHHHHHHHHHhhhhcCCchHHHHHhhhCCCCcHHHHHHHHH
Q 003377 458 SEWKPIEKELYLKGVEIFGRNSCLIARNLLSGLKTCMEVSTYMR 501 (824)
Q Consensus 458 ~~W~~~E~~l~~k~v~~fg~N~C~iA~~ll~g~KTC~EV~~ym~ 501 (824)
..||..|+.+|..++.+||+|+-.|+..| ..||-.++-.|..
T Consensus 190 d~WT~eE~~lFe~al~~yGKdF~~I~~~l--p~Ksv~e~V~yYY 231 (482)
T 2xag_B 190 DEWTVEDKVLFEQAFSFHGKTFHRIQQML--PDKSIASLVKFYY 231 (482)
T ss_dssp --------------------------------------------
T ss_pred cccCHHHHHHHHHHHHHcCccHHHHHHHc--CCCCHHHHHHHhc
Confidence 57999999999999999999999999865 8899999987765
No 101
>2xus_A Breast cancer metastasis-suppressor 1; protein binding; 1.912A {Homo sapiens}
Probab=50.75 E-value=11 Score=30.23 Aligned_cols=31 Identities=19% Similarity=0.397 Sum_probs=27.9
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003377 22 DGLGNLTYKLNQLKKQVQAERVVSVKDKIEK 52 (824)
Q Consensus 22 ~~~~~L~~~i~~lKkqi~~~R~~~ik~k~e~ 52 (824)
+.+..|.-....||.|+=.||+..|+.++++
T Consensus 13 d~l~~LEkqF~~LkEqlY~ERl~ql~~~Lee 43 (49)
T 2xus_A 13 SEMLDLEKQFSELKEKLFRERLSQLRLRLEE 43 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577888899999999999999999999886
No 102
>2eqr_A N-COR1, N-COR, nuclear receptor corepressor 1; SANT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.01 E-value=13 Score=30.43 Aligned_cols=47 Identities=15% Similarity=0.199 Sum_probs=39.6
Q ss_pred ccccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHh
Q 003377 173 EKHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (824)
Q Consensus 173 eK~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~ 222 (824)
....||+.||.++...+..||= -...||.+| ++++.+|.++|-.-++
T Consensus 11 ~~~~WT~eE~~~F~~~~~~~gk---~w~~Ia~~l~~rt~~~~v~~Yy~~Kk 58 (61)
T 2eqr_A 11 FMNVWTDHEKEIFKDKFIQHPK---NFGLIASYLERKSVPDCVLYYYLTKK 58 (61)
T ss_dssp CCCSCCHHHHHHHHHHHHHSTT---CHHHHHHHCTTSCHHHHHHHHHHHTC
T ss_pred cCCCCCHHHHHHHHHHHHHhCC---CHHHHHHHcCCCCHHHHHHHHHHhcC
Confidence 5578999999999999999994 367778888 6899999999976554
No 103
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=49.72 E-value=6.7 Score=41.70 Aligned_cols=19 Identities=37% Similarity=0.985 Sum_probs=13.8
Q ss_pred ccCCCCCC--CCC-CCCcccCC
Q 003377 576 YTPCGCQS--MCG-KQCPCLHN 594 (824)
Q Consensus 576 y~PC~c~~--~C~-~~C~C~~~ 594 (824)
...|+|.+ .|. ..|.|...
T Consensus 47 ~~gC~C~~~~~C~~~~C~C~~~ 68 (302)
T 1ml9_A 47 RVGCSCASDEECMYSTCQCLDE 68 (302)
T ss_dssp CCCCCCSSTTGGGSTTSGGGTT
T ss_pred CCCccCcCCCCcCCCCCcChhh
Confidence 35799986 786 57999763
No 104
>2lua_A Protein MALE-specific lethal-2; DNA binding protein, metal binding; NMR {Drosophila melanogaster}
Probab=49.38 E-value=8.1 Score=31.25 Aligned_cols=19 Identities=32% Similarity=1.093 Sum_probs=16.2
Q ss_pred CCccCCCcccccccCccCc
Q 003377 620 SQCRSRQCPCFAAGRECDP 638 (824)
Q Consensus 620 ~~C~t~~CpC~~a~rECdP 638 (824)
..|....||||..+.-|..
T Consensus 19 ~TC~~~RCpCY~~~~sC~~ 37 (52)
T 2lua_A 19 TTCRNSRCPCYKSYNSCAG 37 (52)
T ss_dssp STTTSTTCHHHHTTCCCSS
T ss_pred eeEcCCccceecCCCccCC
Confidence 3799999999999988864
No 105
>1wgx_A KIAA1903 protein; MYB DNA-binding domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=42.74 E-value=40 Score=29.00 Aligned_cols=44 Identities=14% Similarity=0.104 Sum_probs=35.7
Q ss_pred cCCCCcHHHHHHHHHhhhhcCC----chHHHHHhhhCCCCcHHHHHHHHH
Q 003377 456 CSSEWKPIEKELYLKGVEIFGR----NSCLIARNLLSGLKTCMEVSTYMR 501 (824)
Q Consensus 456 ~~~~W~~~E~~l~~k~v~~fg~----N~C~iA~~ll~g~KTC~EV~~ym~ 501 (824)
....||..|..+|+.++.+|+. +.=.||..+ |.||=.||-..-.
T Consensus 7 ~~~~WT~eE~k~fe~ALa~~~~~tp~rWe~IA~~V--~gKT~eE~~~hY~ 54 (73)
T 1wgx_A 7 GDKEWNEKELQKLHCAFASLPKHKPGFWSEVAAAV--GSRSPEECQRKYM 54 (73)
T ss_dssp SSSCCCHHHHHHHHHHHHHSCSSSSSHHHHHHHHT--TTSCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCccHHHHHHHHc--CCCCHHHHHHHHH
Confidence 3568999999999999999985 466789866 6799888876443
No 106
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=39.03 E-value=29 Score=26.97 Aligned_cols=35 Identities=31% Similarity=0.575 Sum_probs=26.4
Q ss_pred ccceeeEeCCCCeEEEeCCC----ccccCCCccccccCCc
Q 003377 144 GRRRIYYDQHGSEALVCSDS----EEDIIEPEEEKHEFSD 179 (824)
Q Consensus 144 grrriYyd~~g~EalicSds----eee~~e~eeeK~eF~e 179 (824)
|...|-||...|| |||.+- +|++++..-|=+-|+.
T Consensus 12 ~~~~l~~d~~~ge-lvC~~CG~v~~e~~id~~~ewr~f~~ 50 (50)
T 1pft_A 12 ESAELIYDPERGE-IVCAKCGYVIEENIIDMGPEWRAFDA 50 (50)
T ss_dssp SCCCEEEETTTTE-EEESSSCCBCCCCCCCCCSSSSCCCC
T ss_pred CCcceEEcCCCCe-EECcccCCcccccccccCCcccccCC
Confidence 3347899999999 999887 5666776667777763
No 107
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=38.91 E-value=24 Score=29.62 Aligned_cols=28 Identities=18% Similarity=0.272 Sum_probs=25.8
Q ss_pred CCCCcHHHHHHHHHhhhhcCCchHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFGRNSCLIAR 484 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~N~C~iA~ 484 (824)
...||.-|...++.||+-||.+.-.|+.
T Consensus 8 r~~WT~EE~~~L~~gV~k~G~~W~~I~~ 35 (62)
T 1x58_A 8 RKDFTKEEVNYLFHGVKTMGNHWNSILW 35 (62)
T ss_dssp SSSCCHHHHHHHHHHHHHHCSCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhHhHHHHHH
Confidence 5789999999999999999999888885
No 108
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=37.20 E-value=17 Score=41.28 Aligned_cols=32 Identities=6% Similarity=0.083 Sum_probs=27.1
Q ss_pred cEEEEecCCCCcceeeccccCCCCeeeeeccc
Q 003377 676 RILLAKSDVAGWGAFLKNSVSKNDYLGEYTGE 707 (824)
Q Consensus 676 ~l~V~kS~~kG~GLfA~edI~kGefI~EY~GE 707 (824)
.|.|...+..|+||+|+++|++|+.|...--.
T Consensus 94 ~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP~~ 125 (497)
T 3smt_A 94 GFEMVNFKEEGFGLRATRDIKAEELFLWVPRK 125 (497)
T ss_dssp TEEEEEETTTEEEEEESSCBCTTCEEEEEEGG
T ss_pred ceEEEEcCCCccEEEEcccCCCCCEEEEcCHH
Confidence 57888888899999999999999998865433
No 109
>1fex_A TRF2-interacting telomeric RAP1 protein; helix turn helix, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Synthetic} SCOP: a.4.1.3
Probab=36.35 E-value=20 Score=29.35 Aligned_cols=46 Identities=22% Similarity=0.403 Sum_probs=35.5
Q ss_pred cccCCcccchhhhhhHhhcCC------cHHHHHHHHH--HhCCCchHHHHHHHH
Q 003377 174 KHEFSDGEDRILWTVFEEHGL------GEEVINAVSQ--FIGIATSEVQDRYST 219 (824)
Q Consensus 174 K~eF~e~eD~ii~m~~qe~Gl------s~~Vl~~l~q--~~~~~~seI~eRy~~ 219 (824)
+-.||+.||.+|...+.++.. ...+-..|++ +-..+---..+||..
T Consensus 2 R~~FT~edD~~L~~~v~~~~~~~~~~~Gn~iwk~la~~~~~~HtwqSwRdRy~k 55 (59)
T 1fex_A 2 RIAFTDADDVAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLK 55 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCSTTTTTSSHHHHHHHHSCSSSCCSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhccccCCCccHHHHHHHHHhHCCCCCHHHHHHHHHH
Confidence 346999999999999999943 3466677776 557788888888853
No 110
>2cqq_A RSGI RUH-037, DNAJ homolog subfamily C member 1; membrane protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.4.1.3
Probab=34.87 E-value=79 Score=26.83 Aligned_cols=42 Identities=21% Similarity=0.344 Sum_probs=34.0
Q ss_pred CCCCcHHHHHHHHHhhhhcC----CchHHHHHhhhCCCCcHHHHHHHHH
Q 003377 457 SSEWKPIEKELYLKGVEIFG----RNSCLIARNLLSGLKTCMEVSTYMR 501 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg----~N~C~iA~~ll~g~KTC~EV~~ym~ 501 (824)
...||.-|..+|.+++..|+ +..=.||..| | ||=.||-.+..
T Consensus 8 ~~~WT~eE~k~fe~al~~~p~~t~~RW~~IA~~l--g-Rt~~eV~~~y~ 53 (72)
T 2cqq_A 8 APEWTEEDLSQLTRSMVKFPGGTPGRWEKIAHEL--G-RSVTDVTTKAK 53 (72)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTCTTHHHHHHHHH--T-SCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCcHHHHHHHHh--C-CCHHHHHHHHH
Confidence 45799999999999999997 3567899886 4 88888865544
No 111
>3hm5_A DNA methyltransferase 1-associated protein 1; DNA methylation, chromatin, structural genomics consortium, SGC, activator, chromatin regulator; HET: DNA; 1.80A {Homo sapiens}
Probab=32.59 E-value=34 Score=30.74 Aligned_cols=46 Identities=15% Similarity=0.259 Sum_probs=37.9
Q ss_pred ccCCcccchhhhhhHhhcCCcHHHHHHHHHHh------CCCchHHHHHHHHhHhh
Q 003377 175 HEFSDGEDRILWTVFEEHGLGEEVINAVSQFI------GIATSEVQDRYSTLKEK 223 (824)
Q Consensus 175 ~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~------~~~~seI~eRy~~L~~k 223 (824)
..+|..|+..|.=..+++||-=.| |+..+ +|+..+||+||-.+..+
T Consensus 31 ~~WTkEETd~Lf~L~~~fdlRW~v---I~DRy~~~~~~~Rt~EdLK~RyY~v~~~ 82 (93)
T 3hm5_A 31 DAWTKAETDHLFDLSRRFDLRFVV---IHDRYDHQQFKKRSVEDLKERYYHICAK 82 (93)
T ss_dssp TTBCHHHHHHHHHHHHHTTTCHHH---HHHHSCTTTSCCCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhCCCeee---ehhhhccCCCCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999997555 55555 79999999999877653
No 112
>3lcn_C MRNA transport factor GFD1; nuclear mRNA export, metal-binding, nucleus, RNA-binding, ZI finger, membrane, nuclear pore complex; 2.00A {Saccharomyces cerevisiae}
Probab=31.15 E-value=62 Score=23.03 Aligned_cols=21 Identities=29% Similarity=0.422 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 003377 27 LTYKLNQLKKQVQAERVVSVK 47 (824)
Q Consensus 27 L~~~i~~lKkqi~~~R~~~ik 47 (824)
-+.+|..|||+|+..|-.+=+
T Consensus 4 ~~sKm~lLKKKIEEQr~i~~~ 24 (29)
T 3lcn_C 4 TASKMKLLKKKIEEQREILQK 24 (29)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHH
Confidence 356899999999988876544
No 113
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=30.34 E-value=29 Score=38.74 Aligned_cols=33 Identities=21% Similarity=0.390 Sum_probs=26.3
Q ss_pred ccEEEEec-CCCCcceeeccccCCCCeeeeeccc
Q 003377 675 QRILLAKS-DVAGWGAFLKNSVSKNDYLGEYTGE 707 (824)
Q Consensus 675 ~~l~V~kS-~~kG~GLfA~edI~kGefI~EY~GE 707 (824)
++|.|... ...|+||+|+++|++|+.|...--.
T Consensus 38 ~~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~~ 71 (449)
T 3qxy_A 38 PKVAVSRQGTVAGYGMVARESVQAGELLFVVPRA 71 (449)
T ss_dssp TTEEEESSSCSSSSEEEESSCBCTTCEEEEEEGG
T ss_pred CceEEEecCCCceEEEEECCCCCCCCEEEEeCcH
Confidence 46787764 4689999999999999998864443
No 114
>3i9v_2 NADH-quinone oxidoreductase subunit 2; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_2* 2fug_2* 3iam_2* 3ias_2* 3m9s_2*
Probab=28.83 E-value=36 Score=33.76 Aligned_cols=37 Identities=24% Similarity=0.417 Sum_probs=30.7
Q ss_pred hhhhhhHhhcC-CcHHHHHHHHHHhCCCchHHHHHHHHhHh
Q 003377 183 RILWTVFEEHG-LGEEVINAVSQFIGIATSEVQDRYSTLKE 222 (824)
Q Consensus 183 ~ii~m~~qe~G-ls~~Vl~~l~q~~~~~~seI~eRy~~L~~ 222 (824)
-|||.+=+++| |+++++..||+.++.++++| |++..-
T Consensus 29 ~~L~~~Q~~~G~l~~~~~~~iA~~l~l~~~~V---~~VatF 66 (181)
T 3i9v_2 29 PLLRRVQQEEGWIRPERIEEIARLVGTTPTEV---MGVASF 66 (181)
T ss_dssp HHHHHHHHHHSSCCHHHHHHHHHHHTSCHHHH---HHHHTT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHhCcCHHHH---HHHHhH
Confidence 46777777888 89999999999999999999 455543
No 115
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=26.69 E-value=70 Score=27.91 Aligned_cols=27 Identities=19% Similarity=0.171 Sum_probs=25.3
Q ss_pred CCcHHHHHHHHHhhhhcCC-chHHHHHh
Q 003377 459 EWKPIEKELYLKGVEIFGR-NSCLIARN 485 (824)
Q Consensus 459 ~W~~~E~~l~~k~v~~fg~-N~C~iA~~ 485 (824)
.||+-|..++..+|+.||. +.-.|++.
T Consensus 2 ~WT~eEd~~L~~gv~k~G~g~W~~I~~~ 29 (83)
T 2ckx_A 2 PFSVAEVEALVEAVEHLGTGRWRDVKMR 29 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCcHHHHHh
Confidence 5999999999999999998 99999985
No 116
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=26.59 E-value=22 Score=36.34 Aligned_cols=55 Identities=22% Similarity=0.533 Sum_probs=38.9
Q ss_pred CCccchhcccCCc--------cCCccccCCCCCC----CCC--CCCcccCCCcccCC-CCCCCccccccc
Q 003377 558 HPSIWKRIADGKN--------QSCKQYTPCGCQS----MCG--KQCPCLHNGTCCEK-YCGCSKSCKNRF 612 (824)
Q Consensus 558 ~p~~~kri~~~k~--------~~~~~y~PC~c~~----~C~--~~C~C~~~g~~Ce~-~CgC~~~C~nRf 612 (824)
.||.|++|...+. ....+...|+|.. +|+ .+|.+......|.. .|+|...|.||.
T Consensus 16 ~pp~y~~i~~n~~~~~~~~~~~~~~~~~~C~C~~~~~~~C~~~~~C~nr~~~~EC~~~~C~c~~~C~Nr~ 85 (232)
T 3ooi_A 16 KPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQC 85 (232)
T ss_dssp SCCCCEECSSCEECTTCCCCCCCGGGSCCCSCCTTSSSTTCTTSCCHHHHTTBCCCTTTCTTGGGCCCCH
T ss_pred CCCCceEeeccccccccccccCCcccCCcccccCCCCCCCCCCCCCcCcCceeEeCCCCCCCCCCcCCcc
Confidence 3555666655331 1224577899974 577 46777778889998 799999999984
No 117
>2iw5_B Protein corest, REST corepressor 1; oxidoreductase-transcription regulator complex, oxidoreductase/repressor complex, histone demethylase, FAD; HET: FAD; 2.57A {Homo sapiens} SCOP: a.4.1.3 PDB: 2uxn_B* 2uxx_B* 2y48_B* 2v1d_B* 2x0l_B*
Probab=23.86 E-value=47 Score=34.48 Aligned_cols=46 Identities=13% Similarity=0.270 Sum_probs=39.7
Q ss_pred cccCCcccchhhhhhHhhcCCcHHHHHHHHHHh-CCCchHHHHHHHHhHh
Q 003377 174 KHEFSDGEDRILWTVFEEHGLGEEVINAVSQFI-GIATSEVQDRYSTLKE 222 (824)
Q Consensus 174 K~eF~e~eD~ii~m~~qe~Gls~~Vl~~l~q~~-~~~~seI~eRy~~L~~ 222 (824)
...||+.|+.++-.+++.||=. +..||++| ++|..+|+..|..-++
T Consensus 133 s~~WTeEE~~lFleAl~kYGKD---W~~IAk~VgTKT~~QcKnfY~~~kK 179 (235)
T 2iw5_B 133 NARWTTEEQLLAVQAIRKYGRD---FQAISDVIGNKSVVQVKNFFVNYRR 179 (235)
T ss_dssp CSSCCHHHHHHHHHHHHHHSSC---HHHHHHHHSSCCHHHHHHHHHHTTT
T ss_pred CCCCCHHHHHHHHHHHHHHCcC---HHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 5669999999999999999975 88999999 6778899999976554
No 118
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.24 E-value=27 Score=30.08 Aligned_cols=18 Identities=28% Similarity=0.281 Sum_probs=15.4
Q ss_pred EEEEccCCCCCCeEEEec
Q 003377 772 GIFAKEHIEASEELFYDY 789 (824)
Q Consensus 772 ~~fA~RDI~aGEELTfDY 789 (824)
.++|.+||++||-||-+=
T Consensus 8 slvA~rdI~~Gevit~~d 25 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTMDM 25 (79)
T ss_dssp EEEESSCBCTTCBCCGGG
T ss_pred EEEEeCccCCCCCcCHHH
Confidence 578999999999998653
No 119
>1ofc_X ISWI protein; nuclear protein, chromatin remodeling factor, ATPase, SANT domain, nucleosome recognition; HET: GLC G4D; 1.9A {Drosophila melanogaster} SCOP: a.4.1.3 a.4.1.13 a.187.1.1 PDB: 2nog_A
Probab=22.16 E-value=62 Score=34.80 Aligned_cols=44 Identities=27% Similarity=0.375 Sum_probs=38.0
Q ss_pred CCCCcHHHHHHHHHhhhhcCCchHH-HHHhhhCCCCcHHHHHHHHHh
Q 003377 457 SSEWKPIEKELYLKGVEIFGRNSCL-IARNLLSGLKTCMEVSTYMRD 502 (824)
Q Consensus 457 ~~~W~~~E~~l~~k~v~~fg~N~C~-iA~~ll~g~KTC~EV~~ym~~ 502 (824)
-..|+--|-..|.++.+.||++... ||.-+ +.||.-||-+|+..
T Consensus 110 F~~W~rrdf~~Fi~a~~kyGr~~~~~IA~ev--~~Kt~eEV~~Y~~v 154 (304)
T 1ofc_X 110 FTAWTKRDFNQFIKANEKYGRDDIDNIAKDV--EGKTPEEVIEYNAV 154 (304)
T ss_dssp CTTCCHHHHHHHHHHHHHHCTTCHHHHTTSS--TTCCHHHHHHHHHH
T ss_pred hcccCHHHHHHHHHHHHHhCHHHHHHHHHHh--cCCCHHHHHHHHHH
Confidence 4789999999999999999998766 77655 67999999999874
Done!